locus-tag	class	description
CP984_RS00020	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CP984_RS00075	COG1309	transcriptional regulator
CP984_RS00175	COG2124	cytochrome p450
CP984_RS00230	COG2403	cyclic 2,3-diphosphoglycerate synthetase activity
CP984_RS00245	COG0596	Alpha beta hydrolase
CP984_RS00255	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS00265	COG0583	DNA-binding transcription factor activity
CP984_RS00290	COG2814	Major facilitator Superfamily
CP984_RS00300	COG1051	belongs to the nudix hydrolase family
CP984_RS00340	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS00345	COG1309	transcriptional regulator
CP984_RS00360	COG4948	Mandelate Racemase Muconate Lactonizing
CP984_RS00445	COG2409	Drug exporters of the RND superfamily
CP984_RS00450	COG0367	asparagine synthase
CP984_RS00455	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CP984_RS00465	COG2124	cytochrome p450
CP984_RS00480	COG1672	PFAM Archaeal ATPase
CP984_RS00480	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
CP984_RS00510	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CP984_RS00530	COG3437	response regulator, receiver
CP984_RS00530	COG2205	protein histidine kinase activity
CP984_RS00530	COG4999	Histidine kinase
CP984_RS00530	COG3850	Histidine kinase
CP984_RS00545	COG2226	methyltransferase
CP984_RS00570	COG0018	arginyl-trna synthetase
CP984_RS00605	COG0488	(ABC) transporter
CP984_RS00610	COG0488	(ABC) transporter
CP984_RS00620	COG1309	transcriptional regulator
CP984_RS00645	COG1175	transmembrane transport
CP984_RS00650	COG0395	ABC-type sugar transport system, permease component
CP984_RS00655	COG0366	Alpha amylase catalytic
CP984_RS00690	COG2910	NAD(P)H-binding
CP984_RS00715	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CP984_RS00725	COG1396	sequence-specific DNA binding
CP984_RS00735	COG1309	transcriptional regulator
CP984_RS00780	COG0778	Nitroreductase
CP984_RS00790	COG2755	lipolytic protein G-D-S-L family
CP984_RS00790	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CP984_RS00820	COG2340	Cysteine-rich secretory protein family
CP984_RS00840	COG0181	hydroxymethylbilane synthase activity
CP984_RS00865	COG1131	(ABC) transporter
CP984_RS00880	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CP984_RS00895	COG1278	Cold shock
CP984_RS00915	COG2197	response regulator
CP984_RS00920	COG0142	geranyltranstransferase activity
CP984_RS00945	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
CP984_RS00945	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CP984_RS00970	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
CP984_RS00980	COG3012	SEC-C Motif Domain Protein
CP984_RS01045	COG2208	phosphoserine phosphatase activity
CP984_RS01045	COG2172	sigma factor antagonist activity
CP984_RS01045	COG1366	Belongs to the anti-sigma-factor antagonist family
CP984_RS01145	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CP984_RS01150	COG0463	Glycosyl transferase, family 2
CP984_RS01190	COG1960	acyl-CoA dehydrogenase activity
CP984_RS01210	COG1309	transcriptional regulator
CP984_RS01240	COG1797	cobyrinic acid a,c-diamide synthase activity
CP984_RS01255	COG0148	phosphopyruvate hydratase activity
CP984_RS01270	COG1309	transcriptional regulator
CP984_RS01295	COG1012	belongs to the aldehyde dehydrogenase family
CP984_RS01330	COG4221	oxidoreductase activity
CP984_RS01340	COG1278	Cold shock
CP984_RS01405	COG0604	alcohol dehydrogenase
CP984_RS01405	COG3321	synthase
CP984_RS01445	COG0531	amino acid
CP984_RS01450	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CP984_RS01455	COG2326	polyphosphate kinase activity
CP984_RS01485	COG0517	IMP dehydrogenase activity
CP984_RS01485	COG0516	GMP reductase activity
CP984_RS01520	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
CP984_RS01525	COG0298	carbon dioxide binding
CP984_RS01530	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CP984_RS01540	COG0589	response to stress
CP984_RS01555	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CP984_RS01560	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CP984_RS01565	COG2326	polyphosphate kinase activity
CP984_RS01610	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS01615	COG2070	2-Nitropropane dioxygenase
CP984_RS01645	COG0142	geranyltranstransferase activity
CP984_RS01695	COG0604	alcohol dehydrogenase
CP984_RS01705	COG3321	synthase
CP984_RS01705	COG0604	alcohol dehydrogenase
CP984_RS01720	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CP984_RS01735	COG2365	Tyrosine phosphatase family
CP984_RS01740	COG0604	alcohol dehydrogenase
CP984_RS01740	COG3321	synthase
CP984_RS01745	COG0604	alcohol dehydrogenase
CP984_RS01745	COG3321	synthase
CP984_RS01750	COG3321	synthase
CP984_RS01750	COG0604	alcohol dehydrogenase
CP984_RS01800	COG3979	chitinase
CP984_RS01810	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CP984_RS01815	COG1595	DNA-templated transcription, initiation
CP984_RS01845	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
CP984_RS01845	COG2124	cytochrome p450
CP984_RS01850	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
CP984_RS01855	COG2382	esterase
CP984_RS01860	COG1819	glycosyl
CP984_RS01890	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP984_RS01895	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP984_RS01905	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CP984_RS01925	COG2382	esterase
CP984_RS01930	COG2814	Major facilitator Superfamily
CP984_RS01945	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP984_RS01950	COG3433	isochorismatase activity
CP984_RS01950	COG1535	isochorismatase
CP984_RS01955	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CP984_RS01960	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP984_RS01965	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP984_RS01970	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
CP984_RS01980	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS02075	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CP984_RS02095	COG2207	Transcriptional regulator
CP984_RS02100	COG0604	alcohol dehydrogenase
CP984_RS02110	COG0667	Aldo Keto reductase
CP984_RS02130	COG0640	Transcriptional regulator
CP984_RS02135	COG0798	PFAM Bile acid sodium symporter
CP984_RS02140	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CP984_RS02155	COG0583	DNA-binding transcription factor activity
CP984_RS02165	COG1132	(ABC) transporter
CP984_RS02215	COG1595	DNA-templated transcription, initiation
CP984_RS02240	COG0247	lactate metabolic process
CP984_RS02240	COG0277	FAD linked oxidase domain protein
CP984_RS02245	COG3387	PFAM Glycoside hydrolase 15-related
CP984_RS02275	COG1140	nitrate reductase beta subunit
CP984_RS02300	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CP984_RS02315	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
CP984_RS02320	COG2079	MmgE PrpD family protein
CP984_RS02325	COG3800	Transcriptional regulator
CP984_RS02325	COG1396	sequence-specific DNA binding
CP984_RS02330	COG2080	2 iron, 2 sulfur cluster binding
CP984_RS02335	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
CP984_RS02340	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CP984_RS02350	COG3629	intracellular signal transduction
CP984_RS02370	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CP984_RS02380	COG0367	asparagine synthase
CP984_RS02420	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS02425	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
CP984_RS02465	COG2197	response regulator
CP984_RS02495	COG2124	cytochrome p450
CP984_RS02500	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CP984_RS02510	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CP984_RS02560	COG0116	Belongs to the methyltransferase superfamily
CP984_RS02560	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CP984_RS02605	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CP984_RS02635	COG1366	Belongs to the anti-sigma-factor antagonist family
CP984_RS02830	COG3547	Transposase (IS116 IS110 IS902 family)
CP984_RS02855	COG0739	heme binding
CP984_RS02905	COG0494	nUDIX hydrolase
CP984_RS02985	COG1309	transcriptional regulator
CP984_RS03050	COG3293	Transposase
CP984_RS03090	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CP984_RS03105	COG3321	synthase
CP984_RS03105	COG0604	alcohol dehydrogenase
CP984_RS03105	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS03110	COG2130	NADP-dependent
CP984_RS03130	COG1181	Belongs to the D-alanine--D-alanine ligase family
CP984_RS03200	COG0791	NLP P60 protein
CP984_RS03200	COG3883	PFAM NLP P60 protein
CP984_RS03395	COG1309	transcriptional regulator
CP984_RS03430	COG1140	nitrate reductase beta subunit
CP984_RS03435	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CP984_RS03555	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CP984_RS03575	COG2226	methyltransferase
CP984_RS03595	COG3021	interspecies interaction between organisms
CP984_RS03630	COG2755	lipolytic protein G-D-S-L family
CP984_RS03665	COG1585	Membrane protein implicated in regulation of membrane protease activity
CP984_RS03690	COG1215	transferase activity, transferring glycosyl groups
CP984_RS03695	COG0515	serine threonine protein kinase
CP984_RS03720	COG1454	alcohol dehydrogenase
CP984_RS03725	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CP984_RS03775	COG4221	oxidoreductase activity
CP984_RS03805	COG1129	ABC transporter
CP984_RS03805	COG0842	Transport permease protein
CP984_RS03810	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS03810	COG3321	synthase
CP984_RS03810	COG0604	alcohol dehydrogenase
CP984_RS03820	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CP984_RS03835	COG1309	transcriptional regulator
CP984_RS03845	COG0640	Transcriptional regulator
CP984_RS03860	COG2124	cytochrome p450
CP984_RS03875	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CP984_RS03885	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CP984_RS03910	COG0697	spore germination
CP984_RS03925	COG0640	Transcriptional regulator
CP984_RS03930	COG2814	Major facilitator Superfamily
CP984_RS03950	COG3655	Transcriptional regulator
CP984_RS03970	COG0534	Mate efflux family protein
CP984_RS03985	COG0516	GMP reductase activity
CP984_RS03985	COG0517	IMP dehydrogenase activity
CP984_RS03990	COG0318	PFAM AMP-dependent synthetase and ligase
CP984_RS04000	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
CP984_RS04010	COG0477	Major facilitator Superfamily
CP984_RS04015	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CP984_RS04025	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CP984_RS04035	COG2124	cytochrome p450
CP984_RS04045	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CP984_RS04055	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CP984_RS04055	COG3320	Male sterility
CP984_RS04065	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CP984_RS04070	COG3629	intracellular signal transduction
CP984_RS04085	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
CP984_RS04090	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CP984_RS04130	COG1902	pentaerythritol trinitrate reductase activity
CP984_RS04150	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CP984_RS04160	COG2971	BadF BadG BcrA BcrD
CP984_RS04170	COG2706	6-phosphogluconolactonase activity
CP984_RS04185	COG2391	methyltransferase activity
CP984_RS04195	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CP984_RS04200	COG4257	antibiotic catabolic process
CP984_RS04210	COG1595	DNA-templated transcription, initiation
CP984_RS04225	COG1793	dna ligase
CP984_RS04235	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP984_RS04240	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS04240	COG0300	oxidoreductase activity
CP984_RS04240	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP984_RS04240	COG0318	PFAM AMP-dependent synthetase and ligase
CP984_RS04240	COG3321	synthase
CP984_RS04255	COG2175	clavaminate synthase activity
CP984_RS04290	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
CP984_RS04290	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CP984_RS04315	COG0432	Pfam Uncharacterised protein family UPF0047
CP984_RS04320	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CP984_RS04325	COG1116	anion transmembrane transporter activity
CP984_RS04340	COG0492	ferredoxin-NADP+ reductase activity
CP984_RS04370	COG0477	Major facilitator Superfamily
CP984_RS04375	COG0247	lactate metabolic process
CP984_RS04380	COG1139	Iron-sulfur cluster binding protein
CP984_RS04385	COG1556	Lactate utilization protein
CP984_RS04415	COG1132	(ABC) transporter
CP984_RS04445	COG1132	(ABC) transporter
CP984_RS04450	COG1132	(ABC) transporter
CP984_RS04465	COG1946	Acyl-CoA thioesterase
CP984_RS04470	COG0318	PFAM AMP-dependent synthetase and ligase
CP984_RS04475	COG3962	Belongs to the TPP enzyme family
CP984_RS04485	COG0156	8-amino-7-oxononanoate synthase activity
CP984_RS04490	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CP984_RS04495	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS04520	COG2018	Roadblock/LC7 domain
CP984_RS04540	COG4122	O-methyltransferase activity
CP984_RS04575	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CP984_RS04600	COG2353	YceI-like domain
CP984_RS04605	COG2040	homocysteine
CP984_RS04610	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CP984_RS04615	COG0765	amino acid transport
CP984_RS04620	COG1126	abc transporter atp-binding protein
CP984_RS04625	COG3458	cephalosporin-C deacetylase activity
CP984_RS04635	COG1070	Carbohydrate kinase
CP984_RS04645	COG1940	carbohydrate kinase activity
CP984_RS04645	COG1846	Transcriptional regulator
CP984_RS04650	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CP984_RS04655	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CP984_RS04655	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CP984_RS04665	COG2267	carboxylic ester hydrolase activity
CP984_RS04695	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CP984_RS04700	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CP984_RS04715	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
CP984_RS04715	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CP984_RS04725	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CP984_RS04735	COG1070	Carbohydrate kinase
CP984_RS04745	COG2814	Major facilitator Superfamily
CP984_RS04750	COG1349	DNA-binding transcription factor activity
CP984_RS04755	COG2986	histidine ammonia-lyase
CP984_RS04765	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CP984_RS04800	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CP984_RS04805	COG0601	transmembrane transport
CP984_RS04840	COG1960	acyl-CoA dehydrogenase activity
CP984_RS04845	COG1960	acyl-CoA dehydrogenase activity
CP984_RS04850	COG0604	alcohol dehydrogenase
CP984_RS04850	COG3321	synthase
CP984_RS04850	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS04880	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CP984_RS04885	COG2226	methyltransferase
CP984_RS04920	COG3572	ergothioneine biosynthetic process
CP984_RS04925	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CP984_RS04965	COG0823	Involved in the tonB-independent uptake of proteins
CP984_RS04970	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
CP984_RS04970	COG5479	isomerase activity
CP984_RS04990	COG3959	Transketolase, thiamine diphosphate binding domain
CP984_RS04995	COG1252	NADH dehydrogenase
CP984_RS05000	COG1063	alcohol dehydrogenase
CP984_RS05090	COG1137	ATPase activity
CP984_RS05100	COG3360	Dodecin
CP984_RS05105	COG0531	amino acid
CP984_RS05125	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CP984_RS05140	COG2319	Wd-40 repeat
CP984_RS05140	COG4249	Peptidase C14 caspase catalytic subunit p20
CP984_RS05145	COG0180	Tryptophanyl-tRNA synthetase
CP984_RS05175	COG1012	belongs to the aldehyde dehydrogenase family
CP984_RS05180	COG0149	triose-phosphate isomerase activity
CP984_RS05185	COG0698	ribose 5-phosphate isomerase
CP984_RS05190	COG1063	alcohol dehydrogenase
CP984_RS05205	COG0583	DNA-binding transcription factor activity
CP984_RS05210	COG1960	acyl-CoA dehydrogenase activity
CP984_RS05225	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CP984_RS05245	COG1652	LysM domain
CP984_RS05275	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CP984_RS05280	COG1960	acyl-CoA dehydrogenase activity
CP984_RS05285	COG1024	Enoyl-CoA hydratase
CP984_RS05295	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
CP984_RS05310	COG4762	Protein conserved in bacteria
CP984_RS05325	COG0789	Transcriptional regulator
CP984_RS05350	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CP984_RS05365	COG1940	carbohydrate kinase activity
CP984_RS05375	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
CP984_RS05385	COG0583	DNA-binding transcription factor activity
CP984_RS05400	COG0174	glutamine synthetase
CP984_RS05415	COG3246	L-lysine catabolic process to acetate
CP984_RS05420	COG1250	3-hydroxyacyl-CoA dehydrogenase
CP984_RS05425	COG0824	Thioesterase
CP984_RS05425	COG1250	3-hydroxyacyl-CoA dehydrogenase
CP984_RS05455	COG1686	Belongs to the peptidase S11 family
CP984_RS05485	COG0789	Transcriptional regulator
CP984_RS05490	COG3959	Transketolase, thiamine diphosphate binding domain
CP984_RS05495	COG3958	Transketolase
CP984_RS05500	COG2267	carboxylic ester hydrolase activity
CP984_RS05505	COG0402	S-adenosylhomocysteine deaminase activity
CP984_RS05515	COG1960	acyl-CoA dehydrogenase activity
CP984_RS05535	COG2018	Roadblock/LC7 domain
CP984_RS05570	COG0367	asparagine synthase
CP984_RS05580	COG2814	Major facilitator Superfamily
CP984_RS05635	COG2755	lipolytic protein G-D-S-L family
CP984_RS05640	COG2365	Tyrosine phosphatase family
CP984_RS05655	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CP984_RS05660	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
CP984_RS05675	COG1657	PFAM Prenyltransferase squalene oxidase
CP984_RS05685	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
CP984_RS05695	COG1562	ergosterol biosynthetic process
CP984_RS05700	COG1134	teichoic acid transport
CP984_RS05745	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
CP984_RS05765	COG1846	Transcriptional regulator
CP984_RS05770	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
CP984_RS05780	COG1024	Enoyl-CoA hydratase
CP984_RS05800	COG4977	sequence-specific DNA binding
CP984_RS05815	COG2183	response to ionizing radiation
CP984_RS05840	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CP984_RS05850	COG2936	dipeptidyl-peptidase activity
CP984_RS05865	COG3568	Endonuclease Exonuclease Phosphatase
CP984_RS05870	COG2197	response regulator
CP984_RS05885	COG0477	Major facilitator Superfamily
CP984_RS05890	COG1113	amino acid transport
CP984_RS05905	COG1250	3-hydroxyacyl-CoA dehydrogenase
CP984_RS05905	COG1024	Enoyl-CoA hydratase
CP984_RS05910	COG0183	Belongs to the thiolase family
CP984_RS05915	COG1960	acyl-CoA dehydrogenase activity
CP984_RS05920	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CP984_RS05925	COG1285	pathogenesis
CP984_RS05940	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CP984_RS05945	COG3268	Saccharopine dehydrogenase
CP984_RS05950	COG1515	deoxyribonuclease V activity
CP984_RS05955	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CP984_RS05960	COG1309	transcriptional regulator
CP984_RS05990	COG2814	Major facilitator Superfamily
CP984_RS05995	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CP984_RS06005	COG1349	DNA-binding transcription factor activity
CP984_RS06055	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CP984_RS06070	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS06075	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS06080	COG1024	Enoyl-CoA hydratase
CP984_RS06080	COG1250	3-hydroxyacyl-CoA dehydrogenase
CP984_RS06105	COG1309	transcriptional regulator
CP984_RS06110	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS06115	COG1960	acyl-CoA dehydrogenase activity
CP984_RS06120	COG1960	acyl-CoA dehydrogenase activity
CP984_RS06125	COG1289	transmembrane transporter activity
CP984_RS06130	COG1846	Transcriptional regulator
CP984_RS06135	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CP984_RS06165	COG0667	Aldo Keto reductase
CP984_RS06175	COG3226	Transcriptional regulator
CP984_RS06200	COG0745	RESPONSE REGULATOR receiver
CP984_RS06205	COG2205	protein histidine kinase activity
CP984_RS06235	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CP984_RS06245	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CP984_RS06290	COG0583	DNA-binding transcription factor activity
CP984_RS06340	COG0318	PFAM AMP-dependent synthetase and ligase
CP984_RS06345	COG1012	belongs to the aldehyde dehydrogenase family
CP984_RS06360	COG1376	ErfK ybiS ycfS ynhG family protein
CP984_RS06380	COG2124	cytochrome p450
CP984_RS06415	COG0204	Acyl-transferase
CP984_RS06425	COG3511	phospholipase C
CP984_RS06455	COG0287	Prephenate dehydrogenase
CP984_RS06480	COG2124	cytochrome p450
CP984_RS06485	COG2124	cytochrome p450
CP984_RS06495	COG0475	glutathione-regulated potassium exporter activity
CP984_RS06505	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP984_RS06525	COG1132	(ABC) transporter
CP984_RS06540	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
CP984_RS06560	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CP984_RS06570	COG2223	nitrite transmembrane transporter activity
CP984_RS06580	COG1605	Chorismate mutase
CP984_RS06580	COG0287	Prephenate dehydrogenase
CP984_RS06620	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS06635	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CP984_RS06645	COG1063	alcohol dehydrogenase
CP984_RS06680	COG0583	DNA-binding transcription factor activity
CP984_RS06690	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CP984_RS06705	COG0656	L-ascorbic acid biosynthetic process
CP984_RS06720	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS06725	COG4106	trans-aconitate 2-methyltransferase activity
CP984_RS06745	COG1595	DNA-templated transcription, initiation
CP984_RS06750	COG1295	ribonuclease BN
CP984_RS06755	COG2154	pterin-4-alpha-carbinolamine dehydratase
CP984_RS06760	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
CP984_RS06765	COG4941	Belongs to the sigma-70 factor family
CP984_RS06795	COG0789	Transcriptional regulator
CP984_RS06800	COG1309	transcriptional regulator
CP984_RS06805	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS06810	COG0531	amino acid
CP984_RS06820	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CP984_RS06830	COG0431	NADPH-dependent FMN reductase
CP984_RS06845	COG0583	DNA-binding transcription factor activity
CP984_RS06850	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
CP984_RS06880	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS06890	COG4948	Mandelate Racemase Muconate Lactonizing
CP984_RS06900	COG0517	IMP dehydrogenase activity
CP984_RS06905	COG0671	phosphoesterase, PA-phosphatase related
CP984_RS06910	COG2226	methyltransferase
CP984_RS06935	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CP984_RS06965	COG0010	Belongs to the arginase family
CP984_RS06985	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CP984_RS07005	COG2124	cytochrome p450
CP984_RS07020	COG1619	proteins homologs of microcin C7 resistance protein MccF
CP984_RS07030	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CP984_RS07035	COG2362	D-Aminopeptidase
CP984_RS07050	COG1366	Belongs to the anti-sigma-factor antagonist family
CP984_RS07050	COG2208	phosphoserine phosphatase activity
CP984_RS07050	COG2172	sigma factor antagonist activity
CP984_RS07055	COG2207	Transcriptional regulator
CP984_RS07090	COG0456	acetyltransferase
CP984_RS07100	COG1250	3-hydroxyacyl-CoA dehydrogenase
CP984_RS07115	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CP984_RS07115	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CP984_RS07120	COG2301	Belongs to the HpcH HpaI aldolase family
CP984_RS07130	COG1960	acyl-CoA dehydrogenase activity
CP984_RS07135	COG0688	phosphatidylethanolamine metabolic process
CP984_RS07145	COG1929	Belongs to the glycerate kinase type-1 family
CP984_RS07150	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CP984_RS07165	COG2304	oxidoreductase activity
CP984_RS07185	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CP984_RS07200	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
CP984_RS07225	COG0640	Transcriptional regulator
CP984_RS07235	COG0483	inositol monophosphate 1-phosphatase activity
CP984_RS07245	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CP984_RS07260	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CP984_RS07270	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CP984_RS07290	COG1064	alcohol dehydrogenase
CP984_RS07295	COG1278	Cold shock
CP984_RS07300	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CP984_RS07315	COG0723	plastoquinol--plastocyanin reductase activity
CP984_RS07315	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CP984_RS07330	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS07340	COG0477	Major facilitator Superfamily
CP984_RS07345	COG1335	isochorismatase
CP984_RS07365	COG0405	Gamma-glutamyltransferase
CP984_RS07400	COG1959	2 iron, 2 sulfur cluster binding
CP984_RS07405	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CP984_RS07405	COG1017	nitric oxide dioxygenase activity
CP984_RS07415	COG0765	amino acid transport
CP984_RS07420	COG0765	amino acid transport
CP984_RS07425	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CP984_RS07430	COG1126	abc transporter atp-binding protein
CP984_RS07460	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CP984_RS07470	COG0483	inositol monophosphate 1-phosphatase activity
CP984_RS07475	COG0583	DNA-binding transcription factor activity
CP984_RS07480	COG0542	response to heat
CP984_RS07490	COG3693	PFAM glycoside hydrolase, family 10
CP984_RS07515	COG2814	Major facilitator Superfamily
CP984_RS07550	COG0251	oxidation-reduction process
CP984_RS07555	COG0583	DNA-binding transcription factor activity
CP984_RS07570	COG1940	carbohydrate kinase activity
CP984_RS07595	COG2188	Transcriptional regulator
CP984_RS07600	COG0789	Transcriptional regulator
CP984_RS07605	COG1902	pentaerythritol trinitrate reductase activity
CP984_RS07620	COG0800	Aldolase
CP984_RS07660	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CP984_RS07660	COG0237	dephospho-CoA kinase activity
CP984_RS07665	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CP984_RS07670	COG1414	Transcriptional regulator
CP984_RS07685	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CP984_RS07695	COG1288	antiporter activity
CP984_RS07720	COG2233	PERMEase
CP984_RS07730	COG2233	PERMEase
CP984_RS07740	COG2351	hydroxyisourate hydrolase activity
CP984_RS07760	COG3622	Belongs to the hyi family
CP984_RS07765	COG2084	Dehydrogenase
CP984_RS07775	COG0753	catalase activity
CP984_RS07785	COG1126	abc transporter atp-binding protein
CP984_RS07815	COG0318	PFAM AMP-dependent synthetase and ligase
CP984_RS07820	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CP984_RS07825	COG2197	response regulator
CP984_RS07840	COG0583	DNA-binding transcription factor activity
CP984_RS07845	COG4552	Acetyltransferase involved in intracellular survival and related
CP984_RS07850	COG1285	pathogenesis
CP984_RS07865	COG1733	regulation of RNA biosynthetic process
CP984_RS07885	COG2252	PERMEase
CP984_RS07890	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CP984_RS07940	COG0028	Belongs to the TPP enzyme family
CP984_RS07960	COG1162	GTPase activity
CP984_RS07990	COG1204	response to ionizing radiation
CP984_RS07995	COG3903	Transcriptional regulator
CP984_RS07995	COG3629	intracellular signal transduction
CP984_RS08010	COG1309	transcriptional regulator
CP984_RS08045	COG0028	Belongs to the TPP enzyme family
CP984_RS08080	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CP984_RS08085	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CP984_RS08090	COG3485	protocatechuate 3,4-dioxygenase
CP984_RS08095	COG3485	protocatechuate 3,4-dioxygenase
CP984_RS08100	COG0183	Belongs to the thiolase family
CP984_RS08105	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CP984_RS08110	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
CP984_RS08115	COG1414	Transcriptional regulator
CP984_RS08165	COG1960	acyl-CoA dehydrogenase activity
CP984_RS08190	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CP984_RS08200	COG0175	sulfate reduction
CP984_RS08205	COG0529	Catalyzes the synthesis of activated sulfate
CP984_RS08230	COG1116	anion transmembrane transporter activity
CP984_RS08230	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CP984_RS08235	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CP984_RS08260	COG2936	dipeptidyl-peptidase activity
CP984_RS08290	COG0859	PFAM glycosyl transferase family 9
CP984_RS08300	COG1088	dTDP-glucose 4,6-dehydratase activity
CP984_RS08305	COG2192	nodulation
CP984_RS08315	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CP984_RS08330	COG0297	glycogen (starch) synthase activity
CP984_RS08335	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
CP984_RS08340	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
CP984_RS08340	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CP984_RS08350	COG1215	transferase activity, transferring glycosyl groups
CP984_RS08430	COG2362	D-Aminopeptidase
CP984_RS08435	COG0583	DNA-binding transcription factor activity
CP984_RS08440	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CP984_RS08470	COG0693	protein deglycase activity
CP984_RS08480	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CP984_RS08485	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CP984_RS08490	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CP984_RS08495	COG2197	response regulator
CP984_RS08500	COG4585	Histidine kinase
CP984_RS08510	COG1136	(ABC) transporter
CP984_RS08540	COG4152	abc transporter atp-binding protein
CP984_RS08570	COG1280	lysine exporter protein (LysE YggA)
CP984_RS08575	COG3220	belongs to the UPF0276 family
CP984_RS08600	COG3253	May function as heme-dependent peroxidase
CP984_RS08605	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
CP984_RS08615	COG0183	Belongs to the thiolase family
CP984_RS08630	COG0446	pyridine nucleotide-disulphide oxidoreductase
CP984_RS08635	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
CP984_RS08650	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
CP984_RS08660	COG0183	Belongs to the thiolase family
CP984_RS08665	COG1024	Enoyl-CoA hydratase
CP984_RS08665	COG1250	3-hydroxyacyl-CoA dehydrogenase
CP984_RS08680	COG0531	amino acid
CP984_RS08685	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CP984_RS08690	COG4214	carbohydrate transport
CP984_RS08700	COG4213	ABC transporter substrate-binding protein
CP984_RS08715	COG1175	transmembrane transport
CP984_RS08720	COG1653	transport
CP984_RS08735	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CP984_RS08740	COG4106	trans-aconitate 2-methyltransferase activity
CP984_RS08745	COG1120	ATPase activity
CP984_RS08750	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
CP984_RS08765	COG0596	Alpha beta hydrolase
CP984_RS08780	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CP984_RS08785	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CP984_RS08800	COG2223	nitrite transmembrane transporter activity
CP984_RS08815	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CP984_RS08825	COG1063	alcohol dehydrogenase
CP984_RS08850	COG1960	acyl-CoA dehydrogenase activity
CP984_RS08855	COG1024	Enoyl-CoA hydratase
CP984_RS08875	COG1960	acyl-CoA dehydrogenase activity
CP984_RS08890	COG0546	phosphoglycolate phosphatase activity
CP984_RS08915	COG1024	Enoyl-CoA hydratase
CP984_RS08920	COG0531	amino acid
CP984_RS08925	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CP984_RS08930	COG2235	arginine
CP984_RS08995	COG2197	response regulator
CP984_RS09035	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CP984_RS09050	COG2770	Histidine kinase
CP984_RS09050	COG2208	phosphoserine phosphatase activity
CP984_RS09090	COG1799	cell septum assembly
CP984_RS09095	COG0598	Magnesium transport protein CorA
CP984_RS09105	COG0302	gtp cyclohydrolase
CP984_RS09120	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
CP984_RS09140	COG4638	Rieske (2fe-2S)
CP984_RS09145	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CP984_RS09160	COG2986	histidine ammonia-lyase
CP984_RS09165	COG0318	PFAM AMP-dependent synthetase and ligase
CP984_RS09185	COG2814	Major facilitator Superfamily
CP984_RS09190	COG0583	DNA-binding transcription factor activity
CP984_RS09210	COG2201	protein-glutamate methylesterase activity
CP984_RS09235	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CP984_RS09240	COG0601	transmembrane transport
CP984_RS09245	COG0747	negative chemotaxis
CP984_RS09260	COG4948	Mandelate Racemase Muconate Lactonizing
CP984_RS09265	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CP984_RS09275	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CP984_RS09300	COG0583	DNA-binding transcription factor activity
CP984_RS09310	COG0702	epimerase
CP984_RS09330	COG1535	isochorismatase
CP984_RS09330	COG3433	isochorismatase activity
CP984_RS09335	COG1535	isochorismatase
CP984_RS09335	COG3433	isochorismatase activity
CP984_RS09340	COG1021	2,3-dihydroxybenzoate-AMP ligase
CP984_RS09345	COG1169	isochorismate synthase
CP984_RS09350	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS09355	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP984_RS09360	COG2382	esterase
CP984_RS09370	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP984_RS09380	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CP984_RS09385	COG1120	ATPase activity
CP984_RS09400	COG2264	protein methyltransferase activity
CP984_RS09430	COG2124	cytochrome p450
CP984_RS09495	COG3842	ATPase activity
CP984_RS09510	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CP984_RS09515	COG0066	3-isopropylmalate dehydratase activity
CP984_RS09535	COG2197	response regulator
CP984_RS09560	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP984_RS09595	COG1834	amidinotransferase
CP984_RS09600	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CP984_RS09605	COG0134	indole-3-glycerol-phosphate synthase activity
CP984_RS09610	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CP984_RS09620	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CP984_RS09620	COG0512	Glutamine amidotransferase of anthranilate synthase
CP984_RS09630	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
CP984_RS09650	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP984_RS09655	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP984_RS09670	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CP984_RS09675	COG0531	amino acid
CP984_RS09705	COG0569	domain protein
CP984_RS09740	COG1136	(ABC) transporter
CP984_RS09740	COG0577	efflux transmembrane transporter activity
CP984_RS09750	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
CP984_RS09755	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
CP984_RS09760	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
CP984_RS09775	COG0756	dUTP diphosphatase activity
CP984_RS09800	COG2205	protein histidine kinase activity
CP984_RS09805	COG0745	RESPONSE REGULATOR receiver
CP984_RS09810	COG0483	inositol monophosphate 1-phosphatase activity
CP984_RS09815	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
CP984_RS09850	COG1435	thymidine kinase activity
CP984_RS09870	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CP984_RS09875	COG1802	Transcriptional regulator
CP984_RS09890	COG0612	Peptidase, M16
CP984_RS09895	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CP984_RS09905	COG0372	Belongs to the citrate synthase family
CP984_RS09910	COG0372	Belongs to the citrate synthase family
CP984_RS09930	COG3290	protein histidine kinase activity
CP984_RS09935	COG4565	transcriptional regulatory protein
CP984_RS09940	COG2197	response regulator
CP984_RS09945	COG4585	Histidine kinase
CP984_RS09955	COG0187	DNA topoisomerase II activity
CP984_RS09970	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CP984_RS09975	COG2186	Transcriptional regulator
CP984_RS10000	COG0514	ATP-dependent DNA helicase (RecQ)
CP984_RS10015	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CP984_RS10030	COG0488	(ABC) transporter
CP984_RS10045	COG0154	amidase activity
CP984_RS10050	COG3226	Transcriptional regulator
CP984_RS10065	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CP984_RS10070	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CP984_RS10075	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CP984_RS10115	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CP984_RS10125	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CP984_RS10130	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CP984_RS10140	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CP984_RS10160	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CP984_RS10175	COG1278	Cold shock
CP984_RS10180	COG2205	protein histidine kinase activity
CP984_RS10190	COG1126	abc transporter atp-binding protein
CP984_RS10200	COG0765	amino acid transport
CP984_RS10205	COG0765	amino acid transport
CP984_RS10240	COG2409	Drug exporters of the RND superfamily
CP984_RS10245	COG0628	permease
CP984_RS10270	COG2207	Transcriptional regulator
CP984_RS10270	COG1917	Cupin 2, conserved barrel domain protein
CP984_RS10275	COG1201	RNA secondary structure unwinding
CP984_RS10280	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CP984_RS10290	COG0181	hydroxymethylbilane synthase activity
CP984_RS10305	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CP984_RS10310	COG0783	Belongs to the Dps family
CP984_RS10315	COG1396	sequence-specific DNA binding
CP984_RS10320	COG1058	Belongs to the CinA family
CP984_RS10320	COG1546	Belongs to the CinA family
CP984_RS10330	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CP984_RS10340	COG1674	ftsk spoiiie
CP984_RS10350	COG3850	Histidine kinase
CP984_RS10350	COG3437	response regulator, receiver
CP984_RS10350	COG4999	Histidine kinase
CP984_RS10350	COG2205	protein histidine kinase activity
CP984_RS10355	COG2770	Histidine kinase
CP984_RS10355	COG2208	phosphoserine phosphatase activity
CP984_RS10390	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CP984_RS10395	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CP984_RS10400	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
CP984_RS10420	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
CP984_RS10425	COG0612	Peptidase, M16
CP984_RS10430	COG1185	polyribonucleotide nucleotidyltransferase activity
CP984_RS10435	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CP984_RS10445	COG1674	ftsk spoiiie
CP984_RS10570	COG0455	bacterial-type flagellum organization
CP984_RS10580	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CP984_RS10585	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CP984_RS10595	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CP984_RS10610	COG0779	Required for maturation of 30S ribosomal subunits
CP984_RS10625	COG3570	aminoglycoside hydroxyurea antibiotic resistance kinase
CP984_RS10630	COG0442	prolyl-tRNA aminoacylation
CP984_RS10645	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
CP984_RS10650	COG0750	zinc metalloprotease
CP984_RS10655	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CP984_RS10670	COG2197	response regulator
CP984_RS10675	COG4585	Histidine kinase
CP984_RS10680	COG1012	belongs to the aldehyde dehydrogenase family
CP984_RS10765	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CP984_RS10770	COG1177	transmembrane transport
CP984_RS10775	COG1176	ABC-type spermidine putrescine transport system, permease component I
CP984_RS10780	COG3842	ATPase activity
CP984_RS10790	COG1012	belongs to the aldehyde dehydrogenase family
CP984_RS10805	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CP984_RS10830	COG1012	belongs to the aldehyde dehydrogenase family
CP984_RS10840	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CP984_RS10865	COG3842	ATPase activity
CP984_RS10870	COG4208	sulfate ABC transporter
CP984_RS10880	COG0820	rRNA (adenine-C2-)-methyltransferase activity
CP984_RS10890	COG0233	cytoplasmic translational termination
CP984_RS10895	COG0528	UMP kinase activity
CP984_RS10900	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CP984_RS10905	COG0052	Belongs to the universal ribosomal protein uS2 family
CP984_RS10920	COG1191	sigma factor activity
CP984_RS10935	COG0792	nuclease activity
CP984_RS10955	COG0681	Belongs to the peptidase S26 family
CP984_RS10965	COG0681	Belongs to the peptidase S26 family
CP984_RS10975	COG0335	large ribosomal subunit rRNA binding
CP984_RS10980	COG0336	Belongs to the RNA methyltransferase TrmD family
CP984_RS10985	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CP984_RS10990	COG1837	Belongs to the UPF0109 family
CP984_RS10995	COG0228	four-way junction DNA binding
CP984_RS11035	COG1735	metal-dependent hydrolase with the TIM-barrel fold
CP984_RS11040	COG0626	cystathionine gamma-synthase activity
CP984_RS11050	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
CP984_RS11060	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
CP984_RS11095	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CP984_RS11105	COG0477	Major facilitator Superfamily
CP984_RS11110	COG1196	nuclear chromosome segregation
CP984_RS11120	COG1254	Belongs to the acylphosphatase family
CP984_RS11140	COG1733	regulation of RNA biosynthetic process
CP984_RS11145	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CP984_RS11150	COG0571	ribonuclease III activity
CP984_RS11155	COG0333	Belongs to the bacterial ribosomal protein bL32 family
CP984_RS11170	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CP984_RS11175	COG0742	ribosomal rna small subunit methyltransferase
CP984_RS11185	COG1461	Dihydroxyacetone kinase
CP984_RS11190	COG0227	Belongs to the bacterial ribosomal protein bL28 family
CP984_RS11195	COG0351	phosphomethylpyrimidine kinase
CP984_RS11215	COG1181	Belongs to the D-alanine--D-alanine ligase family
CP984_RS11220	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
CP984_RS11230	COG1920	GTP binding
CP984_RS11240	COG0776	regulation of translation
CP984_RS11250	COG0066	3-isopropylmalate dehydratase activity
CP984_RS11255	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CP984_RS11260	COG1414	Transcriptional regulator
CP984_RS11350	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CP984_RS11355	COG0179	Fumarylacetoacetate (FAA) hydrolase
CP984_RS11370	COG2018	Roadblock/LC7 domain
CP984_RS11390	COG2018	Roadblock/LC7 domain
CP984_RS11405	COG2376	Dihydroxyacetone kinase
CP984_RS11410	COG2814	Major facilitator Superfamily
CP984_RS11425	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CP984_RS11430	COG5492	domain, Protein
CP984_RS11435	COG2353	YceI-like domain
CP984_RS11440	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CP984_RS11445	COG0477	Major facilitator Superfamily
CP984_RS11455	COG1309	transcriptional regulator
CP984_RS11460	COG2957	Belongs to the agmatine deiminase family
CP984_RS11465	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CP984_RS11470	COG0473	3-isopropylmalate dehydrogenase activity
CP984_RS11485	COG1012	belongs to the aldehyde dehydrogenase family
CP984_RS11490	COG0506	proline dehydrogenase activity
CP984_RS11495	COG3835	regulator
CP984_RS11515	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CP984_RS11520	COG0440	acetolactate synthase activity
CP984_RS11540	COG0667	Aldo Keto reductase
CP984_RS11545	COG2133	pyrroloquinoline quinone binding
CP984_RS11555	COG2197	response regulator
CP984_RS11570	COG2409	Drug exporters of the RND superfamily
CP984_RS11575	COG3511	phospholipase C
CP984_RS11620	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CP984_RS11630	COG0154	amidase activity
CP984_RS11635	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CP984_RS11645	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CP984_RS11655	COG4221	oxidoreductase activity
CP984_RS11665	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CP984_RS11680	COG0667	Aldo Keto reductase
CP984_RS11685	COG0482	sulfurtransferase activity
CP984_RS11710	COG3903	Transcriptional regulator
CP984_RS11710	COG3629	intracellular signal transduction
CP984_RS11735	COG2860	membrane
CP984_RS11755	COG4608	Belongs to the ABC transporter superfamily
CP984_RS11760	COG0444	Belongs to the ABC transporter superfamily
CP984_RS11765	COG0601	transmembrane transport
CP984_RS11770	COG0747	negative chemotaxis
CP984_RS11775	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CP984_RS11800	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CP984_RS11805	COG0509	glycine decarboxylation via glycine cleavage system
CP984_RS11810	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CP984_RS11815	COG0531	amino acid
CP984_RS11820	COG1760	l-serine dehydratase
CP984_RS11860	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CP984_RS11875	COG0785	Cytochrome C biogenesis protein
CP984_RS11880	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CP984_RS11880	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CP984_RS11905	COG1376	ErfK ybiS ycfS ynhG family protein
CP984_RS11915	COG1132	(ABC) transporter
CP984_RS11920	COG1132	(ABC) transporter
CP984_RS11925	COG0477	Major facilitator Superfamily
CP984_RS11930	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CP984_RS11935	COG2272	Belongs to the type-B carboxylesterase lipase family
CP984_RS11940	COG1252	NADH dehydrogenase
CP984_RS11945	COG1595	DNA-templated transcription, initiation
CP984_RS11950	COG2318	DinB family
CP984_RS11970	COG2197	response regulator
CP984_RS11995	COG0058	SHG alpha-glucan phosphorylase activity
CP984_RS12005	COG0366	Alpha amylase catalytic
CP984_RS12010	COG0366	Alpha amylase catalytic
CP984_RS12020	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CP984_RS12025	COG0667	Aldo Keto reductase
CP984_RS12040	COG0477	Major facilitator Superfamily
CP984_RS12050	COG1301	dicarboxylic acid transport
CP984_RS12055	COG3290	protein histidine kinase activity
CP984_RS12060	COG4565	transcriptional regulatory protein
CP984_RS12070	COG1175	transmembrane transport
CP984_RS12075	COG0395	ABC-type sugar transport system, permease component
CP984_RS12085	COG4249	Peptidase C14 caspase catalytic subunit p20
CP984_RS12085	COG2319	Wd-40 repeat
CP984_RS12095	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CP984_RS12105	COG0577	efflux transmembrane transporter activity
CP984_RS12110	COG1295	ribonuclease BN
CP984_RS12115	COG0753	catalase activity
CP984_RS12140	COG0205	6-phosphofructokinase activity
CP984_RS12145	COG0280	phosphate acetyltransferase
CP984_RS12145	COG0857	belongs to the CobB CobQ family
CP984_RS12150	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CP984_RS12210	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CP984_RS12215	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CP984_RS12235	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CP984_RS12240	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CP984_RS12240	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CP984_RS12295	COG2205	protein histidine kinase activity
CP984_RS12300	COG0745	RESPONSE REGULATOR receiver
CP984_RS12320	COG0183	Belongs to the thiolase family
CP984_RS12340	COG1131	(ABC) transporter
CP984_RS12375	COG1637	Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
CP984_RS12390	COG1250	3-hydroxyacyl-CoA dehydrogenase
CP984_RS12420	COG3850	Histidine kinase
CP984_RS12425	COG2197	response regulator
CP984_RS12440	COG0355	proton-transporting ATP synthase activity, rotational mechanism
CP984_RS12445	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CP984_RS12450	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CP984_RS12455	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CP984_RS12460	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CP984_RS12465	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CP984_RS12470	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CP984_RS12490	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CP984_RS12495	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CP984_RS12505	COG2890	protein-(glutamine-N5) methyltransferase activity
CP984_RS12510	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CP984_RS12515	COG0254	rRNA binding
CP984_RS12530	COG0083	homoserine kinase activity
CP984_RS12535	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
CP984_RS12540	COG0460	homoserine dehydrogenase
CP984_RS12545	COG0019	diaminopimelate decarboxylase activity
CP984_RS12550	COG0018	arginyl-trna synthetase
CP984_RS12555	COG0745	RESPONSE REGULATOR receiver
CP984_RS12580	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP984_RS12610	COG1960	acyl-CoA dehydrogenase activity
CP984_RS12620	COG1250	3-hydroxyacyl-CoA dehydrogenase
CP984_RS12660	COG2124	cytochrome p450
CP984_RS12670	COG0768	penicillin binding
CP984_RS12680	COG1119	ATPase activity
CP984_RS12750	COG1309	transcriptional regulator
CP984_RS12780	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CP984_RS12795	COG0745	RESPONSE REGULATOR receiver
CP984_RS12800	COG2205	protein histidine kinase activity
CP984_RS12805	COG0567	Dehydrogenase, E1 component
CP984_RS12805	COG0508	dehydrogenase complex catalyzes the overall conversion of
CP984_RS12910	COG0604	alcohol dehydrogenase
CP984_RS12920	COG0281	malic enzyme
CP984_RS12925	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CP984_RS12930	COG0765	amino acid transport
CP984_RS12935	COG1126	abc transporter atp-binding protein
CP984_RS12940	COG4106	trans-aconitate 2-methyltransferase activity
CP984_RS12960	COG2201	protein-glutamate methylesterase activity
CP984_RS12995	COG3629	intracellular signal transduction
CP984_RS12995	COG3903	Transcriptional regulator
CP984_RS13025	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CP984_RS13030	COG1993	acr, cog1993
CP984_RS13035	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CP984_RS13040	COG2186	Transcriptional regulator
CP984_RS13045	COG2807	transmembrane transport
CP984_RS13050	COG0598	Magnesium transport protein CorA
CP984_RS13065	COG0477	Major facilitator Superfamily
CP984_RS13080	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CP984_RS13095	COG2066	Belongs to the glutaminase family
CP984_RS13150	COG1597	lipid kinase activity
CP984_RS13165	COG1309	transcriptional regulator
CP984_RS13170	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS13175	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CP984_RS13180	COG0363	glucosamine-6-phosphate deaminase activity
CP984_RS13185	COG1472	Belongs to the glycosyl hydrolase 3 family
CP984_RS13190	COG0395	ABC-type sugar transport system, permease component
CP984_RS13195	COG1175	transmembrane transport
CP984_RS13200	COG2182	Extracellular solute-binding protein
CP984_RS13205	COG2188	Transcriptional regulator
CP984_RS13210	COG1966	Carbon starvation protein
CP984_RS13250	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CP984_RS13255	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CP984_RS13260	COG0242	peptide deformylase activity
CP984_RS13270	COG5662	AntiSigma factor
CP984_RS13275	COG1595	DNA-templated transcription, initiation
CP984_RS13280	COG1396	sequence-specific DNA binding
CP984_RS13280	COG3800	Transcriptional regulator
CP984_RS13290	COG2135	peptidase activity
CP984_RS13300	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
CP984_RS13320	COG2076	Multidrug Resistance protein
CP984_RS13330	COG0483	inositol monophosphate 1-phosphatase activity
CP984_RS13340	COG0753	catalase activity
CP984_RS13370	COG1615	UPF0182 protein
CP984_RS13380	COG3480	Lon protease (S16) C-terminal proteolytic domain
CP984_RS13435	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CP984_RS13485	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CP984_RS13490	COG0210	DNA helicase
CP984_RS13535	COG4172	Belongs to the ABC transporter superfamily
CP984_RS13540	COG0601	transmembrane transport
CP984_RS13545	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CP984_RS13560	COG2267	carboxylic ester hydrolase activity
CP984_RS13600	COG1432	Conserved Protein
CP984_RS13605	COG2095	MarC family integral membrane protein
CP984_RS13620	COG2814	Major facilitator Superfamily
CP984_RS13630	COG0598	Magnesium transport protein CorA
CP984_RS13665	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CP984_RS13670	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CP984_RS13680	COG1595	DNA-templated transcription, initiation
CP984_RS13695	COG1024	Enoyl-CoA hydratase
CP984_RS13700	COG0519	Catalyzes the synthesis of GMP from XMP
CP984_RS13710	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CP984_RS13720	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CP984_RS13760	COG2197	response regulator
CP984_RS13765	COG4585	Histidine kinase
CP984_RS13775	COG1131	(ABC) transporter
CP984_RS13795	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CP984_RS13815	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CP984_RS13820	COG4166	transmembrane transport
CP984_RS13830	COG0444	Belongs to the ABC transporter superfamily
CP984_RS13835	COG4608	Belongs to the ABC transporter superfamily
CP984_RS13845	COG4608	Belongs to the ABC transporter superfamily
CP984_RS13855	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CP984_RS13860	COG0601	transmembrane transport
CP984_RS13890	COG4608	Belongs to the ABC transporter superfamily
CP984_RS13895	COG0444	Belongs to the ABC transporter superfamily
CP984_RS13900	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CP984_RS13905	COG0601	transmembrane transport
CP984_RS13910	COG4166	transmembrane transport
CP984_RS13915	COG1217	gtp-binding protein TYPA
CP984_RS13935	COG1053	succinate dehydrogenase
CP984_RS13965	COG0531	amino acid
CP984_RS13980	COG0508	dehydrogenase complex catalyzes the overall conversion of
CP984_RS13980	COG0596	Alpha beta hydrolase
CP984_RS14010	COG0012	GTP binding
CP984_RS14025	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
CP984_RS14035	COG1570	exodeoxyribonuclease VII activity
CP984_RS14040	COG1722	exodeoxyribonuclease VII activity
CP984_RS14045	COG0778	Nitroreductase
CP984_RS14070	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
CP984_RS14070	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
CP984_RS14075	COG0114	fumarate hydratase activity
CP984_RS14100	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CP984_RS14115	COG1136	(ABC) transporter
CP984_RS14130	COG1136	(ABC) transporter
CP984_RS14155	COG0450	alkyl hydroperoxide reductase
CP984_RS14160	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CP984_RS14180	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CP984_RS14185	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CP984_RS14190	COG0667	Aldo Keto reductase
CP984_RS14235	COG2885	chlorophyll binding
CP984_RS14335	COG2610	gluconate transmembrane transporter activity
CP984_RS14340	COG0251	oxidation-reduction process
CP984_RS14345	COG1414	Transcriptional regulator
CP984_RS14360	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
CP984_RS14380	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
CP984_RS14395	COG0789	Transcriptional regulator
CP984_RS14405	COG1331	Highly conserved protein containing a thioredoxin domain
CP984_RS14425	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CP984_RS14435	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CP984_RS14450	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CP984_RS14455	COG2255	four-way junction helicase activity
CP984_RS14460	COG1595	DNA-templated transcription, initiation
CP984_RS14480	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CP984_RS14535	COG2986	histidine ammonia-lyase
CP984_RS14545	COG1024	Enoyl-CoA hydratase
CP984_RS14550	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
CP984_RS14560	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CP984_RS14575	COG0768	penicillin binding
CP984_RS14580	COG0424	maF-like protein
CP984_RS14620	COG4770	biotin carboxylase activity
CP984_RS14625	COG0702	epimerase
CP984_RS14660	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CP984_RS14695	COG1012	belongs to the aldehyde dehydrogenase family
CP984_RS14700	COG1012	belongs to the aldehyde dehydrogenase family
CP984_RS14715	COG1595	DNA-templated transcription, initiation
CP984_RS14720	COG0745	RESPONSE REGULATOR receiver
CP984_RS14750	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CP984_RS14765	COG0583	DNA-binding transcription factor activity
CP984_RS14770	COG2814	Major facilitator Superfamily
CP984_RS14800	COG1079	Belongs to the binding-protein-dependent transport system permease family
CP984_RS14805	COG4603	Belongs to the binding-protein-dependent transport system permease family
CP984_RS14810	COG3845	ABC transporter
CP984_RS14815	COG1744	ABC transporter substrate-binding protein PnrA-like
CP984_RS14820	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
CP984_RS14820	COG1473	amidohydrolase
CP984_RS14830	COG2089	acid synthase
CP984_RS14835	COG1083	cytidylyl-transferase
CP984_RS14845	COG1216	Glycosyl transferase, family 2
CP984_RS14855	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CP984_RS14890	COG3265	gluconokinase activity
CP984_RS14895	COG2186	Transcriptional regulator
CP984_RS14920	COG3961	Belongs to the TPP enzyme family
CP984_RS14925	COG1846	Transcriptional regulator
CP984_RS14950	COG3525	Glycosyl hydrolase, family 20, catalytic domain
CP984_RS14960	COG2009	succinate dehydrogenase
CP984_RS14970	COG1053	succinate dehydrogenase
CP984_RS14975	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CP984_RS15005	COG1404	Belongs to the peptidase S8 family
CP984_RS15025	COG1295	ribonuclease BN
CP984_RS15035	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
CP984_RS15060	COG0180	Tryptophanyl-tRNA synthetase
CP984_RS15070	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CP984_RS15075	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CP984_RS15080	COG0754	glutathionylspermidine amidase activity
CP984_RS15095	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CP984_RS15100	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CP984_RS15105	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CP984_RS15130	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CP984_RS15135	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CP984_RS15145	COG1396	sequence-specific DNA binding
CP984_RS15160	COG2197	response regulator
CP984_RS15175	COG4585	Histidine kinase
CP984_RS15185	COG4176	ABC-type proline glycine betaine transport system permease component
CP984_RS15195	COG4175	Glycine betaine
CP984_RS15195	COG0517	IMP dehydrogenase activity
CP984_RS15205	COG1012	belongs to the aldehyde dehydrogenase family
CP984_RS15235	COG1476	TRANSCRIPTIONal
CP984_RS15260	COG0039	L-malate dehydrogenase activity
CP984_RS15295	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CP984_RS15300	COG1714	RDD family
CP984_RS15310	COG0138	bifunctional purine biosynthesis protein purh
CP984_RS15345	COG0045	succinate-CoA ligase (ADP-forming) activity
CP984_RS15360	COG3552	Protein containing von Willebrand factor type A (VWA) domain
CP984_RS15365	COG2425	protein containing a von Willebrand factor type A (vWA) domain
CP984_RS15370	COG0714	Associated with various cellular activities
CP984_RS15385	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CP984_RS15430	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS15455	COG0789	Transcriptional regulator
CP984_RS15485	COG1309	transcriptional regulator
CP984_RS15495	COG2197	response regulator
CP984_RS15510	COG0515	serine threonine protein kinase
CP984_RS15510	COG2815	serine threonine protein kinase
CP984_RS15555	COG2084	Dehydrogenase
CP984_RS15570	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CP984_RS15570	COG0519	Catalyzes the synthesis of GMP from XMP
CP984_RS15595	COG1012	belongs to the aldehyde dehydrogenase family
CP984_RS15600	COG0515	serine threonine protein kinase
CP984_RS15615	COG2197	response regulator
CP984_RS15620	COG4585	Histidine kinase
CP984_RS15670	COG1131	(ABC) transporter
CP984_RS15700	COG4821	SIS domain
CP984_RS15710	COG0259	pyridoxamine-phosphate oxidase activity
CP984_RS15730	COG1309	transcriptional regulator
CP984_RS15735	COG1024	Enoyl-CoA hydratase
CP984_RS15740	COG0318	PFAM AMP-dependent synthetase and ligase
CP984_RS15755	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CP984_RS15790	COG2124	cytochrome p450
CP984_RS15800	COG5006	permease, DMT superfamily
CP984_RS15805	COG0583	DNA-binding transcription factor activity
CP984_RS15810	COG0247	lactate metabolic process
CP984_RS15810	COG0277	FAD linked oxidase domain protein
CP984_RS15820	COG2378	regulation of single-species biofilm formation
CP984_RS15825	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CP984_RS15860	COG0667	Aldo Keto reductase
CP984_RS15895	COG2252	PERMEase
CP984_RS15905	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CP984_RS15925	COG2814	Major facilitator Superfamily
CP984_RS15935	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CP984_RS15940	COG2107	Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
CP984_RS15945	COG1278	Cold shock
CP984_RS15960	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP984_RS15965	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP984_RS15970	COG1120	ATPase activity
CP984_RS15975	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CP984_RS15995	COG1061	Type III restriction enzyme res subunit
CP984_RS16010	COG3973	AAA domain
CP984_RS16015	COG3142	Participates in the control of copper homeostasis
CP984_RS16050	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
CP984_RS16055	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
CP984_RS16065	COG1115	amino acid carrier protein
CP984_RS16070	COG4221	oxidoreductase activity
CP984_RS16080	COG1278	Cold shock
CP984_RS16095	COG0463	Glycosyl transferase, family 2
CP984_RS16120	COG1940	carbohydrate kinase activity
CP984_RS16125	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CP984_RS16150	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CP984_RS16210	COG2207	Transcriptional regulator
CP984_RS16210	COG3708	Transcriptional regulator
CP984_RS16225	COG3842	ATPase activity
CP984_RS16235	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CP984_RS16250	COG0215	cysteine-tRNA ligase activity
CP984_RS16255	COG3467	pyridoxamine 5'-phosphate
CP984_RS16260	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
CP984_RS16265	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
CP984_RS16270	COG1329	Transcriptional regulator
CP984_RS16290	COG5002	protein histidine kinase activity
CP984_RS16315	COG0367	asparagine synthase
CP984_RS16320	COG0588	phosphoglycerate mutase activity
CP984_RS16335	COG0438	transferase activity, transferring glycosyl groups
CP984_RS16350	COG0667	Aldo Keto reductase
CP984_RS16370	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CP984_RS16390	COG0456	acetyltransferase
CP984_RS16395	COG0737	Belongs to the 5'-nucleotidase family
CP984_RS16440	COG0702	epimerase
CP984_RS16455	COG0745	RESPONSE REGULATOR receiver
CP984_RS16465	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CP984_RS16470	COG1609	Transcriptional regulator
CP984_RS16475	COG0745	RESPONSE REGULATOR receiver
CP984_RS16510	COG2897	thiosulfate sulfurtransferase activity
CP984_RS16530	COG3485	protocatechuate 3,4-dioxygenase
CP984_RS16535	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP984_RS16540	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
CP984_RS16550	COG0735	belongs to the Fur family
CP984_RS16555	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CP984_RS16560	COG1490	D-aminoacyl-tRNA deacylase activity
CP984_RS16575	COG4552	Acetyltransferase involved in intracellular survival and related
CP984_RS16590	COG1733	regulation of RNA biosynthetic process
CP984_RS16605	COG2890	protein-(glutamine-N5) methyltransferase activity
CP984_RS16615	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CP984_RS16640	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CP984_RS16650	COG1733	regulation of RNA biosynthetic process
CP984_RS16655	COG0604	alcohol dehydrogenase
CP984_RS16690	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CP984_RS16710	COG0306	phosphate transporter
CP984_RS16720	COG1937	Protein conserved in bacteria
CP984_RS16740	COG0277	FAD linked oxidase domain protein
CP984_RS16750	COG0671	phosphoesterase, PA-phosphatase related
CP984_RS16755	COG0791	NLP P60 protein
CP984_RS16840	COG0180	Tryptophanyl-tRNA synthetase
CP984_RS16845	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CP984_RS16865	COG0659	secondary active sulfate transmembrane transporter activity
CP984_RS16870	COG0308	aminopeptidase N
CP984_RS16875	COG2226	methyltransferase
CP984_RS16910	COG0129	dihydroxy-acid dehydratase activity
CP984_RS16920	COG1082	Xylose isomerase domain protein TIM barrel
CP984_RS16925	COG0248	Ppx GppA phosphatase
CP984_RS16945	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
CP984_RS16960	COG0671	phosphoesterase, PA-phosphatase related
CP984_RS16970	COG1194	a g-specific adenine glycosylase
CP984_RS16975	COG1595	DNA-templated transcription, initiation
CP984_RS16985	COG0745	RESPONSE REGULATOR receiver
CP984_RS16990	COG2205	protein histidine kinase activity
CP984_RS16995	COG0346	lactoylglutathione lyase activity
CP984_RS17000	COG2207	Transcriptional regulator
CP984_RS17000	COG4753	response regulator
CP984_RS17015	COG1196	nuclear chromosome segregation
CP984_RS17015	COG0741	lytic transglycosylase activity
CP984_RS17015	COG0739	heme binding
CP984_RS17045	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CP984_RS17065	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
CP984_RS17075	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CP984_RS17080	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
CP984_RS17095	COG0640	Transcriptional regulator
CP984_RS17125	COG0649	NAD binding
CP984_RS17140	COG3226	Transcriptional regulator
CP984_RS17150	COG1309	transcriptional regulator
CP984_RS17155	COG2814	Major facilitator Superfamily
CP984_RS17165	COG1732	Glycine betaine
CP984_RS17170	COG1174	glycine betaine transport
CP984_RS17175	COG1174	glycine betaine transport
CP984_RS17180	COG0517	IMP dehydrogenase activity
CP984_RS17180	COG1125	glycine betaine transport
CP984_RS17190	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CP984_RS17195	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CP984_RS17210	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
CP984_RS17210	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CP984_RS17220	COG0302	gtp cyclohydrolase
CP984_RS17235	COG0037	tRNA processing
CP984_RS17245	COG2027	D-alanyl-D-alanine carboxypeptidase
CP984_RS17250	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CP984_RS17265	COG0393	Putative heavy-metal-binding
CP984_RS17270	COG0789	Transcriptional regulator
CP984_RS17310	COG0655	NAD(P)H dehydrogenase (quinone) activity
CP984_RS17315	COG0076	glutamate decarboxylase activity
CP984_RS17335	COG2318	DinB family
CP984_RS17340	COG1012	belongs to the aldehyde dehydrogenase family
CP984_RS17360	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CP984_RS17370	COG0254	rRNA binding
CP984_RS17380	COG0227	Belongs to the bacterial ribosomal protein bL28 family
CP984_RS17385	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CP984_RS17395	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CP984_RS17395	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CP984_RS17410	COG3655	Transcriptional regulator
CP984_RS17415	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CP984_RS17415	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CP984_RS17420	COG0657	acetylesterase activity
CP984_RS17425	COG1309	transcriptional regulator
CP984_RS17435	COG1349	DNA-binding transcription factor activity
CP984_RS17470	COG2197	response regulator
CP984_RS17475	COG0584	glycerophosphoryl diester phosphodiesterase
CP984_RS17500	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CP984_RS17505	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
CP984_RS17520	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP984_RS17535	COG1132	(ABC) transporter
CP984_RS17540	COG2366	antibiotic biosynthetic process
CP984_RS17555	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CP984_RS17560	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CP984_RS17570	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CP984_RS17570	COG1754	DNA topoisomerase type I activity
CP984_RS17590	COG2890	protein-(glutamine-N5) methyltransferase activity
CP984_RS17600	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
CP984_RS17615	COG1366	Belongs to the anti-sigma-factor antagonist family
CP984_RS17620	COG1111	helicase
CP984_RS17620	COG1205	dead DEAH box helicase
CP984_RS17630	COG1917	Cupin 2, conserved barrel domain protein
CP984_RS17695	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CP984_RS17700	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CP984_RS17710	COG2267	carboxylic ester hydrolase activity
CP984_RS17740	COG2957	Belongs to the agmatine deiminase family
CP984_RS17750	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CP984_RS17775	COG0003	Pfam Anion-transporting ATPase
CP984_RS17785	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CP984_RS17795	COG1408	metallophosphoesterase
CP984_RS17845	COG4106	trans-aconitate 2-methyltransferase activity
CP984_RS17860	COG1819	glycosyl
CP984_RS17870	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CP984_RS17875	COG0318	PFAM AMP-dependent synthetase and ligase
CP984_RS17880	COG2030	dehydratase
CP984_RS17895	COG0515	serine threonine protein kinase
CP984_RS17900	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CP984_RS17910	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CP984_RS18015	COG1357	PFAM Pentapeptide repeats (8 copies)
CP984_RS18030	COG1595	DNA-templated transcription, initiation
CP984_RS18050	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CP984_RS18055	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CP984_RS18090	COG2249	NAD(P)H dehydrogenase (quinone) activity
CP984_RS18095	COG1595	DNA-templated transcription, initiation
CP984_RS18115	COG0402	S-adenosylhomocysteine deaminase activity
CP984_RS18145	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CP984_RS18150	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CP984_RS18155	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CP984_RS18160	COG1609	Transcriptional regulator
CP984_RS18170	COG1309	transcriptional regulator
CP984_RS18185	COG0488	(ABC) transporter
CP984_RS18200	COG4552	Acetyltransferase involved in intracellular survival and related
CP984_RS18205	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CP984_RS18210	COG0463	Glycosyl transferase, family 2
CP984_RS18220	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CP984_RS18240	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CP984_RS18250	COG1940	carbohydrate kinase activity
CP984_RS18255	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CP984_RS18290	COG0523	cobalamin synthesis protein
CP984_RS18325	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CP984_RS18350	COG0657	acetylesterase activity
CP984_RS18390	COG0640	Transcriptional regulator
CP984_RS18400	COG1191	sigma factor activity
CP984_RS18405	COG1191	sigma factor activity
CP984_RS18415	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CP984_RS18435	COG1595	DNA-templated transcription, initiation
CP984_RS18470	COG0110	maltose O-acetyltransferase activity
CP984_RS18520	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CP984_RS18530	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CP984_RS18570	COG0477	Major facilitator Superfamily
CP984_RS18575	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CP984_RS18585	COG2205	protein histidine kinase activity
CP984_RS18590	COG0745	RESPONSE REGULATOR receiver
CP984_RS18615	COG2249	NAD(P)H dehydrogenase (quinone) activity
CP984_RS18640	COG1609	Transcriptional regulator
CP984_RS18720	COG0318	PFAM AMP-dependent synthetase and ligase
CP984_RS18775	COG1595	DNA-templated transcription, initiation
CP984_RS18810	COG0457	Tetratricopeptide repeat
CP984_RS18835	COG2188	Transcriptional regulator
CP984_RS18965	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CP984_RS19005	COG0006	proline dipeptidase activity
CP984_RS19040	COG2372	response to copper ion
CP984_RS19045	COG2837	iron assimilation
CP984_RS19055	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CP984_RS19060	COG0561	phosphatase activity
CP984_RS19090	COG0789	Transcriptional regulator
CP984_RS19105	COG2186	Transcriptional regulator
CP984_RS19110	COG2807	transmembrane transport
CP984_RS19120	COG0789	Transcriptional regulator
CP984_RS19155	COG1131	(ABC) transporter
CP984_RS19175	COG0789	Transcriptional regulator
CP984_RS19190	COG3670	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
CP984_RS19215	COG0501	Belongs to the peptidase M48B family
CP984_RS19225	COG0561	phosphatase activity
CP984_RS19230	COG0739	heme binding
CP984_RS19240	COG4988	ABC transporter
CP984_RS19245	COG1294	oxidase, subunit
CP984_RS19250	COG1271	oxidase subunit
CP984_RS19260	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CP984_RS19265	COG1609	Transcriptional regulator
CP984_RS19270	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CP984_RS19290	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
CP984_RS19315	COG0662	Cupin 2, conserved barrel domain protein
CP984_RS19320	COG1950	PFAM Membrane protein of
CP984_RS19325	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CP984_RS19330	COG0626	cystathionine gamma-synthase activity
CP984_RS19370	COG2814	Major facilitator Superfamily
CP984_RS19375	COG1846	Transcriptional regulator
CP984_RS19410	COG0789	Transcriptional regulator
CP984_RS19410	COG4978	Transcriptional regulator
CP984_RS19435	COG0242	peptide deformylase activity
CP984_RS19440	COG1309	transcriptional regulator
CP984_RS19455	COG0305	Participates in initiation and elongation during chromosome replication
CP984_RS19460	COG0534	Mate efflux family protein
CP984_RS19470	COG0359	binds to the 23S rRNA
CP984_RS19475	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CP984_RS19480	COG0629	single-stranded DNA binding
CP984_RS19485	COG0360	Binds together with S18 to 16S ribosomal RNA
CP984_RS19510	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CP984_RS19515	COG1695	Transcriptional regulator
CP984_RS19535	COG0617	tRNA 3'-terminal CCA addition
CP984_RS19560	COG1595	DNA-templated transcription, initiation
CP984_RS19570	COG0492	ferredoxin-NADP+ reductase activity
CP984_RS19575	COG3118	belongs to the thioredoxin family
CP984_RS19590	COG1192	Involved in chromosome partitioning
CP984_RS19595	COG0357	Ribosomal RNA small subunit methyltransferase G
CP984_RS19605	COG0706	membrane insertase activity
CP984_RS19610	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
CP984_RS19620	COG0230	Belongs to the bacterial ribosomal protein bL34 family
CP984_RS19625	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CP984_RS19635	COG0592	DNA-directed DNA polymerase activity
CP984_RS19640	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
CP984_RS19645	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CP984_RS19650	COG5512	Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives
CP984_RS19660	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CP984_RS19685	COG0515	serine threonine protein kinase
CP984_RS19710	COG0705	Rhomboid family
CP984_RS19725	COG3764	Sortase (surface protein transpeptidase)
CP984_RS19735	COG3764	Sortase (surface protein transpeptidase)
CP984_RS19740	COG3764	Sortase (surface protein transpeptidase)
CP984_RS19745	COG0515	serine threonine protein kinase
CP984_RS19755	COG0768	penicillin binding
CP984_RS19770	COG1716	ATPase activity
CP984_RS19775	COG1716	ATPase activity
CP984_RS19785	COG0583	DNA-binding transcription factor activity
CP984_RS19795	COG4585	Histidine kinase
CP984_RS19800	COG2197	response regulator
CP984_RS19805	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CP984_RS19810	COG1733	regulation of RNA biosynthetic process
CP984_RS19845	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CP984_RS19850	COG2151	metal-sulfur cluster biosynthetic enzyme
CP984_RS19855	COG3396	Phenylacetate-CoA oxygenase
CP984_RS19860	COG3460	Phenylacetate-CoA oxygenase
CP984_RS19865	COG3396	Phenylacetate-CoA oxygenase
CP984_RS19890	COG1250	3-hydroxyacyl-CoA dehydrogenase
CP984_RS19895	COG1309	transcriptional regulator
CP984_RS19900	COG1522	sequence-specific DNA binding
CP984_RS19920	COG0746	molybdenum cofactor guanylyltransferase activity
CP984_RS19925	COG0303	'Molybdopterin
CP984_RS19930	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CP984_RS19935	COG0604	alcohol dehydrogenase
CP984_RS19935	COG3321	synthase
CP984_RS19935	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS19950	COG0515	serine threonine protein kinase
CP984_RS19955	COG0515	serine threonine protein kinase
CP984_RS19980	COG0022	dehydrogenase e1 component
CP984_RS19985	COG0508	dehydrogenase complex catalyzes the overall conversion of
CP984_RS20035	COG0477	Major facilitator Superfamily
CP984_RS20060	COG1802	Transcriptional regulator
CP984_RS20120	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CP984_RS20135	COG3903	Transcriptional regulator
CP984_RS20135	COG3629	intracellular signal transduction
CP984_RS20140	COG1362	aminopeptidase activity
CP984_RS20145	COG1960	acyl-CoA dehydrogenase activity
CP984_RS20160	COG1741	Belongs to the pirin family
CP984_RS20165	COG0628	permease
CP984_RS20175	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
CP984_RS20190	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CP984_RS20195	COG2226	methyltransferase
CP984_RS20220	COG1174	glycine betaine transport
CP984_RS20225	COG1174	glycine betaine transport
CP984_RS20235	COG0517	IMP dehydrogenase activity
CP984_RS20235	COG1125	glycine betaine transport
CP984_RS20325	COG1316	TRANSCRIPTIONal
CP984_RS20365	COG0477	Major facilitator Superfamily
CP984_RS20385	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CP984_RS20400	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CP984_RS20415	COG2197	response regulator
CP984_RS20425	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CP984_RS20435	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP984_RS20455	COG3629	intracellular signal transduction
CP984_RS20465	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CP984_RS20480	COG0789	Transcriptional regulator
CP984_RS20495	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP984_RS20495	COG3321	synthase
CP984_RS20520	COG5635	Nacht domain
CP984_RS20520	COG2319	Wd-40 repeat
CP984_RS20570	COG0717	Belongs to the dCTP deaminase family
CP984_RS20605	COG2181	nitrate reductase activity
CP984_RS20605	COG0247	lactate metabolic process
CP984_RS20610	COG0443	Heat shock 70 kDa protein
CP984_RS20615	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CP984_RS20620	COG0484	heat shock protein binding
CP984_RS20625	COG0789	Transcriptional regulator
CP984_RS20645	COG0542	response to heat
CP984_RS20680	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
CP984_RS20695	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CP984_RS20700	COG0191	fructose-bisphosphate aldolase activity
CP984_RS20710	COG3483	tryptophan 2,3-dioxygenase activity
CP984_RS20715	COG0657	acetylesterase activity
CP984_RS20720	COG4585	Histidine kinase
CP984_RS20725	COG2197	response regulator
CP984_RS20740	COG3559	Exporter of polyketide antibiotics
CP984_RS20745	COG1131	(ABC) transporter
CP984_RS20760	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CP984_RS20775	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
CP984_RS20800	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
CP984_RS20820	COG0693	protein deglycase activity
CP984_RS20830	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CP984_RS20835	COG1802	Transcriptional regulator
CP984_RS20850	COG0151	Belongs to the GarS family
CP984_RS20865	COG0583	DNA-binding transcription factor activity
CP984_RS20870	COG2814	Major facilitator Superfamily
CP984_RS20875	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
CP984_RS20890	COG3850	Histidine kinase
CP984_RS20925	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CP984_RS20930	COG0047	phosphoribosylformylglycinamidine synthase activity
CP984_RS20935	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CP984_RS20995	COG1643	Atp-dependent helicase
CP984_RS21030	COG0513	Belongs to the DEAD box helicase family
CP984_RS21080	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CP984_RS21155	COG2814	Major facilitator Superfamily
CP984_RS21160	COG0667	Aldo Keto reductase
CP984_RS21200	COG0220	tRNA (guanine-N7-)-methyltransferase activity
CP984_RS21205	COG0579	oxidoreductase
CP984_RS21230	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CP984_RS21265	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CP984_RS21270	COG0123	including yeast histone deacetylase and acetoin utilization protein
CP984_RS21325	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
CP984_RS21330	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
CP984_RS21335	COG0181	hydroxymethylbilane synthase activity
CP984_RS21340	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CP984_RS21340	COG1648	precorrin-2 dehydrogenase activity
CP984_RS21345	COG0113	porphobilinogen synthase activity
CP984_RS21385	COG2814	Major facilitator Superfamily
CP984_RS21410	COG0018	arginyl-trna synthetase
CP984_RS21415	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
CP984_RS21480	COG1690	Belongs to the RtcB family
CP984_RS21500	COG1742	UPF0060 membrane protein
CP984_RS21510	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CP984_RS21525	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS21540	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CP984_RS21550	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
CP984_RS21555	COG0406	alpha-ribazole phosphatase activity
CP984_RS21570	COG0785	Cytochrome C biogenesis protein
CP984_RS21575	COG1333	cytochrome c biogenesis protein
CP984_RS21580	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CP984_RS21630	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CP984_RS21635	COG0109	protoheme IX farnesyltransferase activity
CP984_RS21650	COG0163	prenyltransferase activity
CP984_RS21660	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
CP984_RS21675	COG1823	symporter activity
CP984_RS21690	COG1309	transcriptional regulator
CP984_RS21715	COG1278	Cold shock
CP984_RS21720	COG1427	Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
CP984_RS21725	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
CP984_RS21735	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
CP984_RS21750	COG2226	methyltransferase
CP984_RS21790	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CP984_RS21795	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CP984_RS21800	COG0649	NAD binding
CP984_RS21810	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
CP984_RS21815	COG1034	ATP synthesis coupled electron transport
CP984_RS21820	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
CP984_RS21825	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CP984_RS21830	COG0839	Belongs to the complex I subunit 6 family
CP984_RS21835	COG0713	ATP synthesis coupled electron transport
CP984_RS21840	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CP984_RS21850	COG1007	ATP synthesis coupled electron transport
CP984_RS21880	COG0492	ferredoxin-NADP+ reductase activity
CP984_RS21885	COG0142	geranyltranstransferase activity
CP984_RS21905	COG4935	Belongs to the peptidase S8 family
CP984_RS21905	COG2234	aminopeptidase activity
CP984_RS21915	COG1013	pyruvate-flavodoxin oxidoreductase activity
CP984_RS21920	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
CP984_RS21920	COG0674	pyruvate-flavodoxin oxidoreductase activity
CP984_RS21930	COG4585	Histidine kinase
CP984_RS21935	COG4585	Histidine kinase
CP984_RS21955	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CP984_RS21960	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CP984_RS21965	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CP984_RS21970	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
CP984_RS21975	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CP984_RS21980	COG0839	Belongs to the complex I subunit 6 family
CP984_RS21985	COG0713	ATP synthesis coupled electron transport
CP984_RS21990	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CP984_RS22000	COG1007	ATP synthesis coupled electron transport
CP984_RS22005	COG0501	Belongs to the peptidase M48B family
CP984_RS22010	COG3304	Inner membrane component domain
CP984_RS22020	COG1666	GTP binding
CP984_RS22030	COG0702	epimerase
CP984_RS22050	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CP984_RS22055	COG2030	dehydratase
CP984_RS22065	COG0812	UDP-N-acetylmuramate dehydrogenase activity
CP984_RS22070	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CP984_RS22075	COG0436	Aminotransferase
CP984_RS22095	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CP984_RS22100	COG0081	regulation of translation
CP984_RS22110	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CP984_RS22115	COG0222	ribosome binding
CP984_RS22125	COG0085	RNA polymerase activity
CP984_RS22130	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CP984_RS22140	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CP984_RS22145	COG0049	tRNA binding
CP984_RS22150	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CP984_RS22155	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CP984_RS22160	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
CP984_RS22185	COG0051	transcription antitermination factor activity, RNA binding
CP984_RS22190	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CP984_RS22195	COG0088	Forms part of the polypeptide exit tunnel
CP984_RS22200	COG0089	rRNA binding
CP984_RS22205	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CP984_RS22210	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CP984_RS22215	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CP984_RS22220	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CP984_RS22225	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CP984_RS22230	COG0255	Belongs to the universal ribosomal protein uL29 family
CP984_RS22235	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CP984_RS22240	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CP984_RS22245	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CP984_RS22250	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CP984_RS22255	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CP984_RS22265	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CP984_RS22270	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CP984_RS22275	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CP984_RS22280	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CP984_RS22285	COG1841	ribosomal large subunit assembly
CP984_RS22290	COG0200	Binds to the 23S rRNA
CP984_RS22300	COG0563	adenylate kinase activity
CP984_RS22310	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CP984_RS22315	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CP984_RS22320	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CP984_RS22325	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CP984_RS22330	COG0202	RNA polymerase activity
CP984_RS22335	COG0203	ribosomal protein L17
CP984_RS22340	COG0101	tRNA pseudouridine synthase activity
CP984_RS22355	COG0488	(ABC) transporter
CP984_RS22365	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CP984_RS22370	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
CP984_RS22375	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CP984_RS22385	COG1072	(Pantothenic acid kinase))
CP984_RS22390	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CP984_RS22395	COG0736	holo-[acyl-carrier-protein] synthase activity
CP984_RS22405	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CP984_RS22415	COG0802	atpase or kinase
CP984_RS22440	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CP984_RS22460	COG0772	Belongs to the SEDS family
CP984_RS22465	COG1316	TRANSCRIPTIONal
CP984_RS22470	COG2205	protein histidine kinase activity
CP984_RS22475	COG0745	RESPONSE REGULATOR receiver
CP984_RS22480	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CP984_RS22485	COG0459	protein refolding
CP984_RS22510	COG1609	Transcriptional regulator
CP984_RS22520	COG4221	oxidoreductase activity
CP984_RS22530	COG0583	DNA-binding transcription factor activity
CP984_RS22540	COG2197	response regulator
CP984_RS22545	COG1595	DNA-templated transcription, initiation
CP984_RS22560	COG0516	GMP reductase activity
CP984_RS22575	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CP984_RS22595	COG0477	Major facilitator Superfamily
CP984_RS22600	COG0583	DNA-binding transcription factor activity
CP984_RS22610	COG1960	acyl-CoA dehydrogenase activity
CP984_RS22615	COG1960	acyl-CoA dehydrogenase activity
CP984_RS22630	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS22635	COG1960	acyl-CoA dehydrogenase activity
CP984_RS22645	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CP984_RS22650	COG1024	Enoyl-CoA hydratase
CP984_RS22660	COG2072	flavoprotein involved in K transport
CP984_RS22765	COG1960	acyl-CoA dehydrogenase activity
CP984_RS22775	COG1309	transcriptional regulator
CP984_RS22785	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CP984_RS22785	COG0515	serine threonine protein kinase
CP984_RS22805	COG1024	Enoyl-CoA hydratase
CP984_RS22880	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
CP984_RS22900	COG0492	ferredoxin-NADP+ reductase activity
CP984_RS22940	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
CP984_RS22995	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CP984_RS23020	COG1686	Belongs to the peptidase S11 family
CP984_RS23030	COG0640	Transcriptional regulator
CP984_RS23055	COG2205	protein histidine kinase activity
CP984_RS23085	COG0514	ATP-dependent DNA helicase (RecQ)
CP984_RS23105	COG1595	DNA-templated transcription, initiation
CP984_RS23350	COG1674	ftsk spoiiie
CP984_RS23525	COG5280	Phage tail tape measure protein TP901
CP984_RS23525	COG3953	SLT domain
CP984_RS23605	COG0659	secondary active sulfate transmembrane transporter activity
CP984_RS23620	COG0477	Major facilitator Superfamily
CP984_RS23680	COG1309	transcriptional regulator
CP984_RS23715	COG1846	Transcriptional regulator
CP984_RS23735	COG1247	-acetyltransferase
CP984_RS23745	COG1349	DNA-binding transcription factor activity
CP984_RS23765	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CP984_RS23780	COG3191	aminopeptidase activity
CP984_RS23795	COG1473	amidohydrolase
CP984_RS23820	COG0730	response to heat
CP984_RS23825	COG2188	Transcriptional regulator
CP984_RS23830	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
CP984_RS23835	COG0477	Major facilitator Superfamily
CP984_RS23860	COG1970	mechanosensitive ion channel activity
CP984_RS23870	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
CP984_RS23880	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CP984_RS23885	COG3263	regulation of cellular component size
CP984_RS23890	COG2366	antibiotic biosynthetic process
CP984_RS23895	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CP984_RS23900	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CP984_RS23910	COG0315	cyclic pyranopterin monophosphate synthase activity
CP984_RS23915	COG0521	Mo-molybdopterin cofactor biosynthetic process
CP984_RS23920	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CP984_RS23940	COG0739	heme binding
CP984_RS23945	COG1609	Transcriptional regulator
CP984_RS23955	COG1175	transmembrane transport
CP984_RS23960	COG0395	ABC-type sugar transport system, permease component
CP984_RS23980	COG1819	glycosyl
CP984_RS23985	COG0789	Transcriptional regulator
CP984_RS23995	COG2205	protein histidine kinase activity
CP984_RS24015	COG0708	Exodeoxyribonuclease III
CP984_RS24080	COG1733	regulation of RNA biosynthetic process
CP984_RS24085	COG0251	oxidation-reduction process
CP984_RS24090	COG1335	isochorismatase
CP984_RS24100	COG2072	flavoprotein involved in K transport
CP984_RS24105	COG2267	carboxylic ester hydrolase activity
CP984_RS24110	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS24120	COG4946	Tricorn protease homolog
CP984_RS24120	COG0793	Belongs to the peptidase S41A family
CP984_RS24130	COG2409	Drug exporters of the RND superfamily
CP984_RS24145	COG0310	cobalt ion transport
CP984_RS24155	COG1122	ATPase activity
CP984_RS24160	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CP984_RS24165	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS24175	COG0768	penicillin binding
CP984_RS24200	COG0084	hydrolase, TatD family'
CP984_RS24205	COG3583	domain protein
CP984_RS24205	COG3584	3D domain protein
CP984_RS24210	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CP984_RS24215	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CP984_RS24225	COG0488	(ABC) transporter
CP984_RS24255	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
CP984_RS24260	COG2197	response regulator
CP984_RS24280	COG4106	trans-aconitate 2-methyltransferase activity
CP984_RS24290	COG1309	transcriptional regulator
CP984_RS24300	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CP984_RS24315	COG0193	aminoacyl-tRNA hydrolase activity
CP984_RS24320	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CP984_RS24325	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CP984_RS24330	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CP984_RS24345	COG4585	Histidine kinase
CP984_RS24370	COG1316	TRANSCRIPTIONal
CP984_RS24380	COG2814	Major facilitator Superfamily
CP984_RS24395	COG3896	Chloramphenicol phosphotransferase-like protein
CP984_RS24420	COG2814	Major facilitator Superfamily
CP984_RS24425	COG0583	DNA-binding transcription factor activity
CP984_RS24435	COG2124	cytochrome p450
CP984_RS24450	COG0148	phosphopyruvate hydratase activity
CP984_RS24475	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CP984_RS24480	COG0577	efflux transmembrane transporter activity
CP984_RS24485	COG1136	(ABC) transporter
CP984_RS24550	COG0183	Belongs to the thiolase family
CP984_RS24555	COG2755	lipolytic protein G-D-S-L family
CP984_RS24570	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CP984_RS24585	COG1609	Transcriptional regulator
CP984_RS24600	COG0596	Alpha beta hydrolase
CP984_RS24625	COG0019	diaminopimelate decarboxylase activity
CP984_RS24630	COG2022	thiamine diphosphate biosynthetic process
CP984_RS24630	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CP984_RS24645	COG3938	Belongs to the proline racemase family
CP984_RS24655	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
CP984_RS24660	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CP984_RS24665	COG0402	S-adenosylhomocysteine deaminase activity
CP984_RS24670	COG1228	amidohydrolase
CP984_RS24680	COG2197	response regulator
CP984_RS24690	COG3963	phosphatidate phosphatase activity
CP984_RS24695	COG1191	sigma factor activity
CP984_RS24700	COG1366	Belongs to the anti-sigma-factor antagonist family
CP984_RS24730	COG3104	oligopeptide transport
CP984_RS24735	COG0745	RESPONSE REGULATOR receiver
CP984_RS24740	COG5002	protein histidine kinase activity
CP984_RS24775	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
CP984_RS24805	COG1316	TRANSCRIPTIONal
CP984_RS24810	COG1607	acyl-coa hydrolase
CP984_RS24830	COG0477	Major facilitator Superfamily
CP984_RS24875	COG0778	Nitroreductase
CP984_RS24875	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
CP984_RS24880	COG0391	Required for morphogenesis under gluconeogenic growth conditions
CP984_RS24920	COG1620	l-lactate permease
CP984_RS24925	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CP984_RS24930	COG2835	tetraacyldisaccharide 4'-kinase activity
CP984_RS24940	COG1482	cell wall glycoprotein biosynthetic process
CP984_RS24950	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CP984_RS24950	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CP984_RS24950	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CP984_RS24955	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
CP984_RS25000	COG0714	Associated with various cellular activities
CP984_RS25020	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
CP984_RS25025	COG0745	RESPONSE REGULATOR receiver
CP984_RS25030	COG5002	protein histidine kinase activity
CP984_RS25030	COG5000	phosphorelay sensor kinase activity
CP984_RS25035	COG0823	Involved in the tonB-independent uptake of proteins
CP984_RS25055	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CP984_RS25060	COG2197	response regulator
CP984_RS25070	COG0653	protein targeting
CP984_RS25100	COG1134	teichoic acid transport
CP984_RS25110	COG1309	transcriptional regulator
CP984_RS25125	COG0463	Glycosyl transferase, family 2
CP984_RS25135	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CP984_RS25140	COG0438	transferase activity, transferring glycosyl groups
CP984_RS25145	COG0463	Glycosyl transferase, family 2
CP984_RS25155	COG1215	transferase activity, transferring glycosyl groups
CP984_RS25160	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CP984_RS25170	COG0395	ABC-type sugar transport system, permease component
CP984_RS25175	COG1175	transmembrane transport
CP984_RS25180	COG1653	transport
CP984_RS25185	COG1674	ftsk spoiiie
CP984_RS25190	COG0515	serine threonine protein kinase
CP984_RS25195	COG0515	serine threonine protein kinase
CP984_RS25200	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CP984_RS25215	COG2884	Cell division ATP-binding protein ftsE
CP984_RS25220	COG2177	Part of the ABC transporter FtsEX involved in
CP984_RS25225	COG0793	Belongs to the peptidase S41A family
CP984_RS25230	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
CP984_RS25275	COG2223	nitrite transmembrane transporter activity
CP984_RS25305	COG3973	AAA domain
CP984_RS25320	COG0776	regulation of translation
CP984_RS25325	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CP984_RS25330	COG1678	Uncharacterized ACR, COG1678
CP984_RS25335	COG0583	DNA-binding transcription factor activity
CP984_RS25345	COG2814	Major facilitator Superfamily
CP984_RS25365	COG1175	transmembrane transport
CP984_RS25370	COG0395	ABC-type sugar transport system, permease component
CP984_RS25375	COG3525	Glycosyl hydrolase, family 20, catalytic domain
CP984_RS25390	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CP984_RS25410	COG2201	protein-glutamate methylesterase activity
CP984_RS25415	COG0477	Major facilitator Superfamily
CP984_RS25435	COG1732	Glycine betaine
CP984_RS25440	COG1174	glycine betaine transport
CP984_RS25450	COG1174	glycine betaine transport
CP984_RS25460	COG3185	4-Hydroxyphenylpyruvate dioxygenase
CP984_RS25465	COG0277	FAD linked oxidase domain protein
CP984_RS25470	COG0222	ribosome binding
CP984_RS25515	COG1335	isochorismatase
CP984_RS25525	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
CP984_RS25535	COG1113	amino acid transport
CP984_RS25550	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP984_RS25555	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
CP984_RS25575	COG1234	tRNA 3'-trailer cleavage
CP984_RS25580	COG1263	PTS System
CP984_RS25585	COG1263	PTS System
CP984_RS25590	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CP984_RS25595	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
CP984_RS25610	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CP984_RS25640	COG2205	protein histidine kinase activity
CP984_RS25655	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CP984_RS25665	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CP984_RS25695	COG2733	membrane
CP984_RS25700	COG3764	Sortase (surface protein transpeptidase)
CP984_RS25710	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CP984_RS25720	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
CP984_RS25740	COG0706	membrane insertase activity
CP984_RS25745	COG0179	Fumarylacetoacetate (FAA) hydrolase
CP984_RS25755	COG4702	Belongs to the UPF0303 family
CP984_RS25760	COG0673	inositol 2-dehydrogenase activity
CP984_RS25775	COG2188	Transcriptional regulator
CP984_RS25805	COG1840	ABC-type Fe3 transport system, periplasmic component
CP984_RS25845	COG2186	Transcriptional regulator
CP984_RS25875	COG3397	chitin binding
CP984_RS25880	COG3397	chitin binding
CP984_RS25895	COG1126	abc transporter atp-binding protein
CP984_RS25900	COG0765	amino acid transport
CP984_RS25905	COG0765	amino acid transport
CP984_RS25920	COG0154	amidase activity
CP984_RS25940	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CP984_RS25990	COG0588	phosphoglycerate mutase activity
CP984_RS26025	COG3979	chitinase
CP984_RS26055	COG5297	Belongs to the glycosyl hydrolase family 6
CP984_RS26070	COG2910	NAD(P)H-binding
CP984_RS26080	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
CP984_RS26085	COG4977	sequence-specific DNA binding
CP984_RS26095	COG0589	response to stress
CP984_RS26100	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CP984_RS26115	COG1960	acyl-CoA dehydrogenase activity
CP984_RS26130	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CP984_RS26135	COG1309	transcriptional regulator
CP984_RS26145	COG1946	Acyl-CoA thioesterase
CP984_RS26190	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
CP984_RS26200	COG0281	malic enzyme
CP984_RS26205	COG1309	transcriptional regulator
CP984_RS26210	COG1511	domain protein
CP984_RS26215	COG1132	(ABC) transporter
CP984_RS26250	COG1472	Belongs to the glycosyl hydrolase 3 family
CP984_RS26265	COG1609	Transcriptional regulator
CP984_RS26270	COG0673	inositol 2-dehydrogenase activity
CP984_RS26285	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CP984_RS26305	COG0569	domain protein
CP984_RS26305	COG0475	glutathione-regulated potassium exporter activity
CP984_RS26315	COG0673	inositol 2-dehydrogenase activity
CP984_RS26330	COG2814	Major facilitator Superfamily
CP984_RS26335	COG1082	Xylose isomerase domain protein TIM barrel
CP984_RS26340	COG0673	inositol 2-dehydrogenase activity
CP984_RS26350	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CP984_RS26360	COG3718	enzyme involved in inositol metabolism
CP984_RS26365	COG3962	Belongs to the TPP enzyme family
CP984_RS26385	COG1131	(ABC) transporter
CP984_RS26415	COG1077	Cell shape determining protein MreB Mrl
CP984_RS26520	COG1160	GTP binding
CP984_RS26525	COG0629	single-stranded DNA binding
CP984_RS26555	COG2346	COG2346, Truncated hemoglobins
CP984_RS26560	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CP984_RS26590	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CP984_RS26605	COG1486	melibiose metabolic process
CP984_RS26610	COG0395	ABC-type sugar transport system, permease component
CP984_RS26615	COG1175	transmembrane transport
CP984_RS26630	COG1846	Transcriptional regulator
CP984_RS26630	COG1940	carbohydrate kinase activity
CP984_RS26660	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CP984_RS26665	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
CP984_RS26670	COG2080	2 iron, 2 sulfur cluster binding
CP984_RS26700	COG0668	transmembrane transport
CP984_RS26710	COG3525	Glycosyl hydrolase, family 20, catalytic domain
CP984_RS26710	COG3291	Pkd domain containing protein
CP984_RS26740	COG0583	DNA-binding transcription factor activity
CP984_RS26745	COG4266	Belongs to the allantoicase family
CP984_RS26765	COG2337	Toxic component of a toxin-antitoxin (TA) module
CP984_RS26800	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CP984_RS26805	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CP984_RS26810	COG1113	amino acid transport
CP984_RS26815	COG1113	amino acid transport
CP984_RS26820	COG1268	BioY protein
CP984_RS26830	COG0515	serine threonine protein kinase
CP984_RS26850	COG4552	Acetyltransferase involved in intracellular survival and related
CP984_RS26865	COG0475	glutathione-regulated potassium exporter activity
CP984_RS26870	COG1136	(ABC) transporter
CP984_RS26875	COG3594	Acyltransferase
CP984_RS26900	COG0544	peptidyl-prolyl cis-trans isomerase activity
CP984_RS26905	COG0740	serine-type endopeptidase activity
CP984_RS26910	COG0740	serine-type endopeptidase activity
CP984_RS26915	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CP984_RS26930	COG0525	valine-tRNA ligase activity
CP984_RS26940	COG0768	penicillin binding
CP984_RS26945	COG0285	dihydrofolate synthase activity
CP984_RS26955	COG0105	UTP biosynthetic process
CP984_RS26960	COG1077	Cell shape determining protein MreB Mrl
CP984_RS26980	COG0772	Belongs to the SEDS family
CP984_RS26990	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CP984_RS27000	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CP984_RS27000	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CP984_RS27025	COG1530	ribonuclease E activity
CP984_RS27030	COG0261	This protein binds to 23S rRNA in the presence of protein L20
CP984_RS27035	COG0211	Belongs to the bacterial ribosomal protein bL27 family
CP984_RS27040	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CP984_RS27045	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CP984_RS27055	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CP984_RS27070	COG0501	Belongs to the peptidase M48B family
CP984_RS27080	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CP984_RS27090	COG0799	negative regulation of ribosome biogenesis
CP984_RS27095	COG0588	phosphoglycerate mutase activity
CP984_RS27145	COG0495	leucyl-tRNA aminoacylation
CP984_RS27155	COG1307	EDD domain protein, DegV family
CP984_RS27160	COG1555	photosystem II stabilization
CP984_RS27160	COG1596	polysaccharide export
CP984_RS27165	COG1234	tRNA 3'-trailer cleavage
CP984_RS27170	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CP984_RS27175	COG1959	2 iron, 2 sulfur cluster binding
CP984_RS27205	COG0268	Binds directly to 16S ribosomal RNA
CP984_RS27210	COG0481	GTPase activity
CP984_RS27220	COG1022	Amp-dependent synthetase and ligase
CP984_RS27225	COG3437	response regulator, receiver
CP984_RS27260	COG1420	regulation of RNA biosynthetic process
CP984_RS27265	COG0484	heat shock protein binding
CP984_RS27295	COG0537	adenosine 5'-monophosphoramidase activity
CP984_RS27300	COG1234	tRNA 3'-trailer cleavage
CP984_RS27310	COG4948	Mandelate Racemase Muconate Lactonizing
CP984_RS27325	COG1486	melibiose metabolic process
CP984_RS27330	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CP984_RS27340	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CP984_RS27350	COG2814	Major facilitator Superfamily
CP984_RS27390	COG0318	PFAM AMP-dependent synthetase and ligase
CP984_RS27395	COG0492	ferredoxin-NADP+ reductase activity
CP984_RS27410	COG0475	glutathione-regulated potassium exporter activity
CP984_RS27415	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CP984_RS27425	COG2723	6-phospho-beta-galactosidase activity
CP984_RS27440	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CP984_RS27450	COG1381	Involved in DNA repair and RecF pathway recombination
CP984_RS27455	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CP984_RS27465	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CP984_RS27470	COG1121	(ABC) transporter
CP984_RS27480	COG0423	glycine-tRNA ligase activity
CP984_RS27495	COG2197	response regulator
CP984_RS27510	COG0667	Aldo Keto reductase
CP984_RS27515	COG0477	Major facilitator Superfamily
CP984_RS27540	COG0574	Belongs to the PEP-utilizing enzyme family
CP984_RS27540	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CP984_RS27550	COG2175	clavaminate synthase activity
CP984_RS27560	COG0395	ABC-type sugar transport system, permease component
CP984_RS27565	COG1175	transmembrane transport
CP984_RS27575	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS27580	COG0789	Transcriptional regulator
CP984_RS27590	COG2814	Major facilitator Superfamily
CP984_RS27620	COG3485	protocatechuate 3,4-dioxygenase
CP984_RS27635	COG0531	amino acid
CP984_RS27655	COG2146	nitrite reductase [NAD(P)H] activity
CP984_RS27655	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CP984_RS27660	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CP984_RS27670	COG2197	response regulator
CP984_RS27685	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CP984_RS27715	COG2382	esterase
CP984_RS27755	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CP984_RS27770	COG0243	molybdopterin cofactor binding
CP984_RS27780	COG0232	Belongs to the dGTPase family. Type 2 subfamily
CP984_RS27795	COG0358	DNA primase activity
CP984_RS27800	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CP984_RS27805	COG1070	Carbohydrate kinase
CP984_RS27835	COG1834	amidinotransferase
CP984_RS27850	COG3835	regulator
CP984_RS27855	COG2080	2 iron, 2 sulfur cluster binding
CP984_RS27855	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CP984_RS27860	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CP984_RS27870	COG1077	Cell shape determining protein MreB Mrl
CP984_RS27880	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CP984_RS27910	COG4981	capsule polysaccharide biosynthetic process
CP984_RS27915	COG0500	methyltransferase
CP984_RS27940	COG0477	Major facilitator Superfamily
CP984_RS27950	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CP984_RS27960	COG2130	NADP-dependent
CP984_RS27965	COG1764	response to oxidative stress
CP984_RS27980	COG1172	Belongs to the binding-protein-dependent transport system permease family
CP984_RS27990	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CP984_RS28040	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CP984_RS28045	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CP984_RS28050	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CP984_RS28075	COG0789	Transcriptional regulator
CP984_RS28080	COG0667	Aldo Keto reductase
CP984_RS28095	COG2197	response regulator
CP984_RS28100	COG4585	Histidine kinase
CP984_RS28115	COG1309	transcriptional regulator
CP984_RS28120	COG0477	Major facilitator Superfamily
CP984_RS28135	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
CP984_RS28190	COG0586	Pfam SNARE associated Golgi protein
CP984_RS28195	COG4585	Histidine kinase
CP984_RS28220	COG4948	Mandelate Racemase Muconate Lactonizing
CP984_RS28245	COG2259	Doxx family
CP984_RS28255	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
CP984_RS28270	COG1120	ATPase activity
CP984_RS28335	COG1072	(Pantothenic acid kinase))
CP984_RS28365	COG2259	Doxx family
CP984_RS28390	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CP984_RS28395	COG3409	Peptidoglycan-binding domain 1 protein
CP984_RS28395	COG0860	N-Acetylmuramoyl-L-alanine amidase
CP984_RS28405	COG0456	acetyltransferase
CP984_RS28440	COG0477	Major facilitator Superfamily
CP984_RS28450	COG0667	Aldo Keto reductase
CP984_RS28465	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CP984_RS28490	COG2124	cytochrome p450
CP984_RS28495	COG0183	Belongs to the thiolase family
CP984_RS28505	COG2318	DinB family
CP984_RS28530	COG3845	ABC transporter
CP984_RS28545	COG1657	PFAM Prenyltransferase squalene oxidase
CP984_RS28565	COG0515	serine threonine protein kinase
CP984_RS28575	COG1132	(ABC) transporter
CP984_RS28580	COG1132	(ABC) transporter
CP984_RS28585	COG2197	response regulator
CP984_RS28590	COG1309	transcriptional regulator
CP984_RS28630	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CP984_RS28640	COG0860	N-Acetylmuramoyl-L-alanine amidase
CP984_RS28650	COG1960	acyl-CoA dehydrogenase activity
CP984_RS28655	COG0183	Belongs to the thiolase family
CP984_RS28665	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS28670	COG0509	glycine decarboxylation via glycine cleavage system
CP984_RS28675	COG2197	response regulator
CP984_RS28710	COG4585	Histidine kinase
CP984_RS28715	COG2030	dehydratase
CP984_RS28725	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS28740	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CP984_RS28755	COG2015	COG2015, Alkyl sulfatase and related hydrolases
CP984_RS28760	COG0800	Aldolase
CP984_RS28765	COG3022	response to hydroperoxide
CP984_RS28770	COG0557	exoribonuclease II activity
CP984_RS28780	COG0789	Transcriptional regulator
CP984_RS28790	COG1957	nucleoside hydrolase
CP984_RS28795	COG3629	intracellular signal transduction
CP984_RS28795	COG3903	Transcriptional regulator
CP984_RS29130	COG0776	regulation of translation
CP984_RS29260	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CP984_RS29265	COG0535	radical SAM domain protein
CP984_RS29295	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CP984_RS29320	COG3540	Alkaline phosphatase
CP984_RS29325	COG2814	Major facilitator Superfamily
CP984_RS29330	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CP984_RS29340	COG1834	amidinotransferase
CP984_RS29365	COG0672	)-iron permease
CP984_RS29370	COG2837	iron assimilation
CP984_RS29380	COG1120	ATPase activity
CP984_RS29385	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP984_RS29390	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CP984_RS29445	COG1175	transmembrane transport
CP984_RS29450	COG0395	ABC-type sugar transport system, permease component
CP984_RS29480	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CP984_RS29485	COG1994	Peptidase M50
CP984_RS29515	COG1687	branched-chain amino acid
CP984_RS29520	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
CP984_RS29525	COG0477	Major facilitator Superfamily
CP984_RS29540	COG2814	Major facilitator Superfamily
CP984_RS29550	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CP984_RS29550	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CP984_RS29555	COG2132	Multicopper oxidase
CP984_RS29580	COG0174	glutamine synthetase
CP984_RS29585	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
CP984_RS29595	COG1609	Transcriptional regulator
CP984_RS29600	COG0366	Alpha amylase catalytic
CP984_RS29605	COG2182	Extracellular solute-binding protein
CP984_RS29610	COG1175	transmembrane transport
CP984_RS29615	COG3833	ABC-type maltose transport systems, permease component
CP984_RS29620	COG0366	Alpha amylase catalytic
CP984_RS29645	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CP984_RS29700	COG1309	transcriptional regulator
CP984_RS29725	COG2197	response regulator
CP984_RS29730	COG4585	Histidine kinase
CP984_RS29745	COG0745	RESPONSE REGULATOR receiver
CP984_RS29760	COG3591	Belongs to the peptidase S1B family
CP984_RS29765	COG0673	inositol 2-dehydrogenase activity
CP984_RS29780	COG0318	PFAM AMP-dependent synthetase and ligase
CP984_RS29785	COG0745	RESPONSE REGULATOR receiver
CP984_RS29790	COG2205	protein histidine kinase activity
CP984_RS29835	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
CP984_RS29840	COG0321	lipoyl(octanoyl) transferase activity
CP984_RS29855	COG1090	epimerase
CP984_RS29880	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
CP984_RS29890	COG0508	dehydrogenase complex catalyzes the overall conversion of
CP984_RS29895	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CP984_RS29900	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CP984_RS29910	COG0438	transferase activity, transferring glycosyl groups
CP984_RS29935	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
CP984_RS29950	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CP984_RS29950	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
CP984_RS29955	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
CP984_RS29975	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CP984_RS29980	COG1132	(ABC) transporter
CP984_RS29985	COG2226	methyltransferase
CP984_RS30005	COG4585	Histidine kinase
CP984_RS30010	COG2197	response regulator
CP984_RS30015	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CP984_RS30025	COG2161	toxin-antitoxin pair type II binding
CP984_RS30030	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
CP984_RS30050	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CP984_RS30060	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CP984_RS30065	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CP984_RS30075	COG1376	ErfK ybiS ycfS ynhG family protein
CP984_RS30085	COG1845	cytochrome c oxidase, subunit III
CP984_RS30090	COG2010	Cytochrome c
CP984_RS30095	COG0723	plastoquinol--plastocyanin reductase activity
CP984_RS30100	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CP984_RS30105	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CP984_RS30110	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CP984_RS30120	COG0705	Rhomboid family
CP984_RS30140	COG0791	NLP P60 protein
CP984_RS30140	COG3883	PFAM NLP P60 protein
CP984_RS30155	COG0438	transferase activity, transferring glycosyl groups
CP984_RS30175	COG0003	Pfam Anion-transporting ATPase
CP984_RS30185	COG1940	carbohydrate kinase activity
CP984_RS30220	COG2197	response regulator
CP984_RS30225	COG0205	6-phosphofructokinase activity
CP984_RS30230	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CP984_RS30240	COG2267	carboxylic ester hydrolase activity
CP984_RS30245	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CP984_RS30250	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
CP984_RS30260	COG2193	ferroxidase activity
CP984_RS30265	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CP984_RS30275	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
CP984_RS30280	COG0515	serine threonine protein kinase
CP984_RS30280	COG2815	serine threonine protein kinase
CP984_RS30285	COG2022	thiamine diphosphate biosynthetic process
CP984_RS30295	COG2022	thiamine diphosphate biosynthetic process
CP984_RS30295	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CP984_RS30310	COG0352	thiamine-phosphate diphosphorylase activity
CP984_RS30325	COG1233	COG1233 Phytoene dehydrogenase and related
CP984_RS30335	COG1309	transcriptional regulator
CP984_RS30355	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CP984_RS30375	COG0714	Associated with various cellular activities
CP984_RS30385	COG0275	rRNA processing
CP984_RS30395	COG0768	penicillin binding
CP984_RS30400	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CP984_RS30410	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CP984_RS30415	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CP984_RS30425	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CP984_RS30430	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CP984_RS30455	COG1799	cell septum assembly
CP984_RS30465	COG3599	regulation of cell shape
CP984_RS30470	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CP984_RS30485	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CP984_RS30540	COG0587	DNA-directed DNA polymerase activity
CP984_RS30545	COG1432	Conserved Protein
CP984_RS30565	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CP984_RS30580	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CP984_RS30585	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CP984_RS30590	COG0131	Imidazoleglycerol-phosphate dehydratase
CP984_RS30595	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CP984_RS30600	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
CP984_RS30605	COG0251	oxidation-reduction process
CP984_RS30610	COG0107	imidazoleglycerol-phosphate synthase activity
CP984_RS30625	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CP984_RS30630	COG1053	succinate dehydrogenase
CP984_RS30640	COG0583	DNA-binding transcription factor activity
CP984_RS30645	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CP984_RS30655	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CP984_RS30675	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CP984_RS30700	COG0134	indole-3-glycerol-phosphate synthase activity
CP984_RS30710	COG0133	tryptophan synthase activity
CP984_RS30715	COG0159	tryptophan synthase activity
CP984_RS30725	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CP984_RS30730	COG2301	Belongs to the HpcH HpaI aldolase family
CP984_RS30735	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CP984_RS30760	COG1609	Transcriptional regulator
CP984_RS30770	COG0069	glutamate synthase activity
CP984_RS30770	COG0070	glutamate synthase
CP984_RS30770	COG0067	glutamate synthase
CP984_RS30780	COG1846	Transcriptional regulator
CP984_RS30785	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS30790	COG3467	pyridoxamine 5'-phosphate
CP984_RS30805	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CP984_RS30810	COG0596	Alpha beta hydrolase
CP984_RS30845	COG0464	growth
CP984_RS30865	COG2197	response regulator
CP984_RS30875	COG1470	cell adhesion involved in biofilm formation
CP984_RS30875	COG0366	Alpha amylase catalytic
CP984_RS30905	COG0737	Belongs to the 5'-nucleotidase family
CP984_RS30965	COG2050	protein possibly involved in aromatic compounds catabolism
CP984_RS31000	COG1643	Atp-dependent helicase
CP984_RS31005	COG2226	methyltransferase
CP984_RS31030	COG0237	dephospho-CoA kinase activity
CP984_RS31055	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CP984_RS31060	COG4279	zinc finger
CP984_RS31105	COG0584	glycerophosphoryl diester phosphodiesterase
CP984_RS31110	COG0556	nucleotide-excision repair
CP984_RS31155	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CP984_RS31170	COG1063	alcohol dehydrogenase
CP984_RS31175	COG2814	Major facilitator Superfamily
CP984_RS31220	COG0322	excinuclease ABC activity
CP984_RS31225	COG1660	Displays ATPase and GTPase activities
CP984_RS31235	COG1481	regulation of sporulation
CP984_RS31240	COG0454	-acetyltransferase
CP984_RS31240	COG0456	acetyltransferase
CP984_RS31250	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CP984_RS31255	COG0126	phosphoglycerate kinase activity
CP984_RS31260	COG0149	triose-phosphate isomerase activity
CP984_RS31265	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CP984_RS31275	COG0166	Belongs to the GPI family
CP984_RS31285	COG0363	glucosamine-6-phosphate deaminase activity
CP984_RS31300	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CP984_RS31305	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CP984_RS31310	COG0109	protoheme IX farnesyltransferase activity
CP984_RS31325	COG1612	heme a metabolic process
CP984_RS31350	COG0719	Fe-S assembly protein
CP984_RS31360	COG0396	ATPase activity
CP984_RS31365	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CP984_RS31370	COG0822	iron-sulfur transferase activity
CP984_RS31390	COG2076	Multidrug Resistance protein
CP984_RS31395	COG3226	Transcriptional regulator
CP984_RS31410	COG2171	N-acyltransferase activity
CP984_RS31425	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CP984_RS31455	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CP984_RS31490	COG2261	transglycosylase associated protein
CP984_RS31495	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CP984_RS31500	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CP984_RS31530	COG4585	Histidine kinase
CP984_RS31535	COG1414	Transcriptional regulator
CP984_RS31545	COG0456	acetyltransferase
CP984_RS31580	COG5285	phytanoyl-CoA dioxygenase
CP984_RS31585	COG1917	Cupin 2, conserved barrel domain protein
CP984_RS31590	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CP984_RS31605	COG0385	Bile acid
CP984_RS31630	COG1797	cobyrinic acid a,c-diamide synthase activity
CP984_RS31635	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
CP984_RS31650	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
CP984_RS31670	COG0235	Class ii aldolase
CP984_RS31695	COG0488	(ABC) transporter
CP984_RS31705	COG1024	Enoyl-CoA hydratase
CP984_RS31715	COG1302	Protein conserved in bacteria
CP984_RS31745	COG3387	PFAM Glycoside hydrolase 15-related
CP984_RS31760	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CP984_RS31800	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CP984_RS31805	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CP984_RS31820	COG2261	transglycosylase associated protein
CP984_RS31825	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CP984_RS31840	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS31845	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CP984_RS31850	COG2186	Transcriptional regulator
CP984_RS31855	COG2807	transmembrane transport
CP984_RS31870	COG0560	Phosphoserine phosphatase
CP984_RS31870	COG3830	Belongs to the UPF0237 family
CP984_RS31880	COG1131	(ABC) transporter
CP984_RS31880	COG1716	ATPase activity
CP984_RS31880	COG0842	Transport permease protein
CP984_RS31895	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CP984_RS31900	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS31905	COG4585	Histidine kinase
CP984_RS31910	COG2197	response regulator
CP984_RS31930	COG1119	ATPase activity
CP984_RS31955	COG1881	PFAM PEBP family protein
CP984_RS31965	COG2094	Belongs to the DNA glycosylase MPG family
CP984_RS32000	COG3486	L-lysine 6-monooxygenase (NADPH) activity
CP984_RS32015	COG0647	UMP catabolic process
CP984_RS32030	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP984_RS32035	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP984_RS32040	COG1120	ATPase activity
CP984_RS32060	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CP984_RS32080	COG0497	DNA recombination
CP984_RS32090	COG0438	transferase activity, transferring glycosyl groups
CP984_RS32120	COG3387	PFAM Glycoside hydrolase 15-related
CP984_RS32125	COG0504	CTP synthase activity
CP984_RS32130	COG0494	nUDIX hydrolase
CP984_RS32140	COG0686	Belongs to the AlaDH PNT family
CP984_RS32155	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CP984_RS32160	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CP984_RS32165	COG1187	pseudouridine synthase activity
CP984_RS32175	COG3541	Predicted nucleotidyltransferase
CP984_RS32200	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
CP984_RS32210	COG1160	GTP binding
CP984_RS32240	COG0411	ABC transporter
CP984_RS32275	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CP984_RS32335	COG0671	phosphoesterase, PA-phosphatase related
CP984_RS32345	COG0477	Major facilitator Superfamily
CP984_RS32350	COG1960	acyl-CoA dehydrogenase activity
CP984_RS32355	COG1799	cell septum assembly
CP984_RS32365	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CP984_RS32370	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CP984_RS32410	COG0326	Molecular chaperone. Has ATPase activity
CP984_RS32420	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS32430	COG0587	DNA-directed DNA polymerase activity
CP984_RS32435	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CP984_RS32465	COG0019	diaminopimelate decarboxylase activity
CP984_RS32495	COG1725	Transcriptional regulator
CP984_RS32505	COG1834	amidinotransferase
CP984_RS32525	COG0726	polysaccharide deacetylase
CP984_RS32530	COG1215	transferase activity, transferring glycosyl groups
CP984_RS32535	COG0463	Glycosyl transferase, family 2
CP984_RS32555	COG0515	serine threonine protein kinase
CP984_RS32555	COG2815	serine threonine protein kinase
CP984_RS32575	COG1595	DNA-templated transcription, initiation
CP984_RS32590	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CP984_RS32600	COG0477	Major facilitator Superfamily
CP984_RS32600	COG2814	Major facilitator Superfamily
CP984_RS32605	COG4195	phage-related replication protein
CP984_RS32610	COG2188	Transcriptional regulator
CP984_RS32615	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
CP984_RS32620	COG2851	Citrate transporter
CP984_RS32680	COG1960	acyl-CoA dehydrogenase activity
CP984_RS32720	COG0477	Major facilitator Superfamily
CP984_RS32725	COG3876	Protein conserved in bacteria
CP984_RS32735	COG0318	PFAM AMP-dependent synthetase and ligase
CP984_RS32745	COG0456	acetyltransferase
CP984_RS32745	COG1846	Transcriptional regulator
CP984_RS32750	COG1960	acyl-CoA dehydrogenase activity
CP984_RS32765	COG2149	membrane
CP984_RS32770	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
CP984_RS32795	COG3573	Dehydrogenase
CP984_RS32830	COG3173	Aminoglycoside phosphotransferase
CP984_RS32835	COG5002	protein histidine kinase activity
CP984_RS32840	COG0745	RESPONSE REGULATOR receiver
CP984_RS32865	COG2124	cytochrome p450
CP984_RS32870	COG0488	(ABC) transporter
CP984_RS32970	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CP984_RS33000	COG0667	Aldo Keto reductase
CP984_RS33005	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CP984_RS33015	COG0598	Magnesium transport protein CorA
CP984_RS33035	COG0215	cysteine-tRNA ligase activity
CP984_RS33060	COG4948	Mandelate Racemase Muconate Lactonizing
CP984_RS33065	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS33075	COG1129	ABC transporter
CP984_RS33080	COG4211	Belongs to the binding-protein-dependent transport system permease family
CP984_RS33100	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS33105	COG2186	Transcriptional regulator
CP984_RS33110	COG0402	S-adenosylhomocysteine deaminase activity
CP984_RS33115	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
CP984_RS33125	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
CP984_RS33130	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
CP984_RS33135	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CP984_RS33140	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CP984_RS33145	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CP984_RS33150	COG1414	Transcriptional regulator
CP984_RS33155	COG0646	methionine synthase
CP984_RS33155	COG1410	methionine synthase
CP984_RS33165	COG4166	transmembrane transport
CP984_RS33175	COG2197	response regulator
CP984_RS33185	COG1994	Peptidase M50
CP984_RS33185	COG0517	IMP dehydrogenase activity
CP984_RS33205	COG1222	aaa ATPase
CP984_RS33210	COG4122	O-methyltransferase activity
CP984_RS33225	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
CP984_RS33230	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
CP984_RS33235	COG1609	Transcriptional regulator
CP984_RS33245	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
CP984_RS33260	COG2378	regulation of single-species biofilm formation
CP984_RS33280	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CP984_RS33285	COG0805	protein transport
CP984_RS33295	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CP984_RS33310	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CP984_RS33315	COG0517	IMP dehydrogenase activity
CP984_RS33315	COG4175	Glycine betaine
CP984_RS33320	COG4176	ABC-type proline glycine betaine transport system permease component
CP984_RS33340	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
CP984_RS33345	COG0531	amino acid
CP984_RS33350	COG2186	Transcriptional regulator
CP984_RS33355	COG0174	glutamine synthetase
CP984_RS33395	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CP984_RS33405	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CP984_RS33410	COG0291	Belongs to the bacterial ribosomal protein bL35 family
CP984_RS33415	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CP984_RS33420	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CP984_RS33425	COG5002	protein histidine kinase activity
CP984_RS33430	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CP984_RS33435	COG0072	phenylalanine-tRNA ligase activity
CP984_RS33435	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CP984_RS33465	COG1649	PFAM Uncharacterised BCR, COG1649
CP984_RS33475	COG0697	spore germination
CP984_RS33490	COG1486	melibiose metabolic process
CP984_RS33495	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CP984_RS33500	COG0395	ABC-type sugar transport system, permease component
CP984_RS33505	COG1175	transmembrane transport
CP984_RS33510	COG2182	Extracellular solute-binding protein
CP984_RS33545	COG1595	DNA-templated transcription, initiation
CP984_RS33550	COG1660	Displays ATPase and GTPase activities
CP984_RS33575	COG2838	Isocitrate dehydrogenase
CP984_RS33590	COG4585	Histidine kinase
CP984_RS33595	COG2197	response regulator
CP984_RS33630	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CP984_RS33645	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CP984_RS33650	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
CP984_RS33655	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CP984_RS33660	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CP984_RS33665	COG1438	arginine binding
CP984_RS33670	COG1228	amidohydrolase
CP984_RS33720	COG0137	argininosuccinate synthase activity
CP984_RS33725	COG0165	Argininosuccinate lyase
CP984_RS33735	COG0477	Major facilitator Superfamily
CP984_RS33740	COG0737	Belongs to the 5'-nucleotidase family
CP984_RS33750	COG0584	glycerophosphoryl diester phosphodiesterase
CP984_RS33775	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CP984_RS33780	COG2011	ABC-type metal ion transport system permease component
CP984_RS33785	COG1464	Belongs to the NlpA lipoprotein family
CP984_RS33800	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
CP984_RS33805	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CP984_RS33805	COG1648	precorrin-2 dehydrogenase activity
CP984_RS33810	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CP984_RS33875	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CP984_RS33930	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CP984_RS33945	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CP984_RS33975	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CP984_RS33980	COG1560	Kdo2-lipid A biosynthetic process
CP984_RS33985	COG0438	transferase activity, transferring glycosyl groups
CP984_RS34000	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
CP984_RS34005	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
CP984_RS34010	COG0217	transcriptional regulatory protein
CP984_RS34015	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
CP984_RS34020	COG0632	four-way junction helicase activity
CP984_RS34025	COG2255	four-way junction helicase activity
CP984_RS34035	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CP984_RS34040	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CP984_RS34045	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CP984_RS34050	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CP984_RS34055	COG1196	nuclear chromosome segregation
CP984_RS34060	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CP984_RS34070	COG0124	histidyl-tRNA synthetase
CP984_RS34090	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CP984_RS34110	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CP984_RS34115	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CP984_RS34130	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CP984_RS34135	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CP984_RS34140	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CP984_RS34145	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CP984_RS34150	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
CP984_RS34165	COG0006	proline dipeptidase activity
CP984_RS34170	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CP984_RS34175	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CP984_RS34185	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CP984_RS34190	COG0540	Belongs to the ATCase OTCase family
CP984_RS34195	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CP984_RS34205	COG0505	Belongs to the CarA family
CP984_RS34210	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CP984_RS34215	COG0167	dihydroorotate dehydrogenase activity
CP984_RS34220	COG0284	orotidine-5'-phosphate decarboxylase activity
CP984_RS34245	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CP984_RS34280	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CP984_RS34290	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CP984_RS34295	COG2390	Transcriptional regulator
CP984_RS34335	COG0531	amino acid
CP984_RS34360	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CP984_RS34380	COG2233	PERMEase
CP984_RS34390	COG0738	Major facilitator superfamily
CP984_RS34395	COG1846	Transcriptional regulator
CP984_RS34395	COG1940	carbohydrate kinase activity
CP984_RS34400	COG0702	epimerase
CP984_RS34415	COG3201	nicotinamide mononucleotide transporter
CP984_RS34420	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CP984_RS34420	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CP984_RS34425	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
CP984_RS34430	COG0140	phosphoribosyl-ATP diphosphatase activity
CP984_RS34435	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
CP984_RS34490	COG0671	phosphoesterase, PA-phosphatase related
CP984_RS34515	COG0584	glycerophosphoryl diester phosphodiesterase
CP984_RS34560	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
CP984_RS34570	COG1191	sigma factor activity
CP984_RS34595	COG2318	DinB family
CP984_RS34600	COG2319	Wd-40 repeat
CP984_RS34600	COG4249	Peptidase C14 caspase catalytic subunit p20
CP984_RS34615	COG3973	AAA domain
CP984_RS34650	COG3345	alpha-galactosidase
CP984_RS34660	COG1175	transmembrane transport
CP984_RS34665	COG0395	ABC-type sugar transport system, permease component
CP984_RS34685	COG0644	oxidoreductase
CP984_RS34690	COG4585	Histidine kinase
CP984_RS34695	COG2197	response regulator
CP984_RS34715	COG1940	carbohydrate kinase activity
CP984_RS34765	COG1349	DNA-binding transcription factor activity
CP984_RS34775	COG0464	growth
CP984_RS34815	COG0463	Glycosyl transferase, family 2
CP984_RS34820	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CP984_RS34880	COG1012	belongs to the aldehyde dehydrogenase family
CP984_RS34925	COG0640	Transcriptional regulator
CP984_RS34945	COG2111	Na H antiporter
CP984_RS34950	COG1006	Multisubunit Na H antiporter MnhC subunit
CP984_RS34955	COG1007	ATP synthesis coupled electron transport
CP984_RS34965	COG1461	Dihydroxyacetone kinase
CP984_RS34970	COG2376	Dihydroxyacetone kinase
CP984_RS35010	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CP984_RS35025	COG0596	Alpha beta hydrolase
CP984_RS35045	COG1309	transcriptional regulator
CP984_RS35055	COG1414	Transcriptional regulator
CP984_RS35060	COG3386	PFAM SMP-30 Gluconolaconase
CP984_RS35075	COG4214	carbohydrate transport
CP984_RS35115	COG1366	Belongs to the anti-sigma-factor antagonist family
CP984_RS35115	COG2172	sigma factor antagonist activity
CP984_RS35115	COG2208	phosphoserine phosphatase activity
CP984_RS35130	COG2318	DinB family
CP984_RS35140	COG0367	asparagine synthase
CP984_RS35165	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CP984_RS35170	COG1960	acyl-CoA dehydrogenase activity
CP984_RS35175	COG0515	serine threonine protein kinase
CP984_RS35190	COG2070	2-Nitropropane dioxygenase
CP984_RS35200	COG2366	antibiotic biosynthetic process
CP984_RS35205	COG0318	PFAM AMP-dependent synthetase and ligase
CP984_RS35250	COG1605	Chorismate mutase
CP984_RS35305	COG4221	oxidoreductase activity
CP984_RS35340	COG2124	cytochrome p450
CP984_RS35345	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CP984_RS35390	COG0438	transferase activity, transferring glycosyl groups
CP984_RS35395	COG0438	transferase activity, transferring glycosyl groups
CP984_RS35410	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
CP984_RS35420	COG1984	allophanate hydrolase subunit 2
CP984_RS35425	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CP984_RS35430	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
CP984_RS35450	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CP984_RS35495	COG2146	nitrite reductase [NAD(P)H] activity
CP984_RS35550	COG0442	prolyl-tRNA aminoacylation
CP984_RS35555	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CP984_RS35560	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CP984_RS35565	COG5001	Diguanylate cyclase
CP984_RS35565	COG3447	MASE1 domain protein
CP984_RS35565	COG5002	protein histidine kinase activity
CP984_RS35570	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CP984_RS35580	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
CP984_RS35595	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CP984_RS35605	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CP984_RS35640	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CP984_RS35660	COG1716	ATPase activity
CP984_RS35680	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CP984_RS35690	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CP984_RS35690	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CP984_RS35715	COG0384	phenazine biosynthesis protein PhzF
CP984_RS35725	COG0789	Transcriptional regulator
CP984_RS35735	COG1695	Transcriptional regulator
CP984_RS35750	COG0697	spore germination
CP984_RS35770	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CP984_RS35775	COG0697	spore germination
CP984_RS35795	COG0825	malonyl-CoA metabolic process
CP984_RS35795	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CP984_RS35800	COG0318	PFAM AMP-dependent synthetase and ligase
CP984_RS35820	COG4946	Tricorn protease homolog
CP984_RS35820	COG0823	Involved in the tonB-independent uptake of proteins
CP984_RS35820	COG1506	peptidase
CP984_RS35875	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS35895	COG0154	amidase activity
CP984_RS35920	COG0667	Aldo Keto reductase
CP984_RS35925	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CP984_RS35960	COG1132	(ABC) transporter
CP984_RS35970	COG0640	Transcriptional regulator
CP984_RS35975	COG1252	NADH dehydrogenase
CP984_RS35985	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CP984_RS36000	COG0386	Belongs to the glutathione peroxidase family
CP984_RS36010	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CP984_RS36065	COG2267	carboxylic ester hydrolase activity
CP984_RS36070	COG0531	amino acid
CP984_RS36120	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CP984_RS36125	COG0019	diaminopimelate decarboxylase activity
CP984_RS36130	COG0531	amino acid
CP984_RS36145	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CP984_RS36150	COG2205	protein histidine kinase activity
CP984_RS36190	COG4733	cellulase activity
CP984_RS36195	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CP984_RS36255	COG0583	DNA-binding transcription factor activity
CP984_RS36275	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CP984_RS36285	COG3795	YCII-related domain
CP984_RS36290	COG4941	Belongs to the sigma-70 factor family
CP984_RS36305	COG1595	DNA-templated transcription, initiation
CP984_RS36350	COG0438	transferase activity, transferring glycosyl groups
CP984_RS36355	COG0745	RESPONSE REGULATOR receiver
CP984_RS36360	COG2205	protein histidine kinase activity
CP984_RS36380	COG1968	undecaprenyl-diphosphatase activity
CP984_RS36395	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CP984_RS36445	COG3285	dna ligase
CP984_RS36445	COG1793	dna ligase
CP984_RS36455	COG1366	Belongs to the anti-sigma-factor antagonist family
CP984_RS36460	COG0248	Ppx GppA phosphatase
CP984_RS36480	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS36485	COG0300	oxidoreductase activity
CP984_RS36515	COG0110	maltose O-acetyltransferase activity
CP984_RS36525	COG1470	cell adhesion involved in biofilm formation
CP984_RS36530	COG2124	cytochrome p450
CP984_RS36535	COG1309	transcriptional regulator
CP984_RS36570	COG1832	CoA-binding protein
CP984_RS36575	COG1739	Uncharacterized protein family UPF0029
CP984_RS36605	COG1335	isochorismatase
CP984_RS36610	COG1982	Orn Lys Arg decarboxylase major
CP984_RS36615	COG0243	molybdopterin cofactor binding
CP984_RS36615	COG3383	formate dehydrogenase (NAD+) activity
CP984_RS36620	COG0437	4 iron, 4 sulfur cluster binding
CP984_RS36635	COG1846	Transcriptional regulator
CP984_RS36645	COG1597	lipid kinase activity
CP984_RS36655	COG2706	6-phosphogluconolactonase activity
CP984_RS36665	COG0823	Involved in the tonB-independent uptake of proteins
CP984_RS36670	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
CP984_RS36675	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CP984_RS36720	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP984_RS36730	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP984_RS36755	COG0535	radical SAM domain protein
CP984_RS36765	COG1140	nitrate reductase beta subunit
CP984_RS36770	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CP984_RS36775	COG2181	nitrate reductase activity
CP984_RS36785	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
CP984_RS36795	COG1140	nitrate reductase beta subunit
CP984_RS36840	COG1882	Formate acetyltransferase
CP984_RS36845	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CP984_RS36860	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CP984_RS36860	COG2146	nitrite reductase [NAD(P)H] activity
CP984_RS36880	COG0667	Aldo Keto reductase
CP984_RS36950	COG1113	amino acid transport
CP984_RS36960	COG1132	(ABC) transporter
CP984_RS36975	COG0420	3'-5' exonuclease activity
CP984_RS36980	COG0419	ATPase involved in DNA repair
CP984_RS36985	COG1522	sequence-specific DNA binding
CP984_RS36995	COG2226	methyltransferase
CP984_RS37035	COG1595	DNA-templated transcription, initiation
CP984_RS37040	COG2188	Transcriptional regulator
CP984_RS37055	COG1940	carbohydrate kinase activity
CP984_RS37070	COG3663	DNA glycosylase
CP984_RS37075	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CP984_RS37090	COG0583	DNA-binding transcription factor activity
CP984_RS37130	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CP984_RS37135	COG0577	efflux transmembrane transporter activity
CP984_RS37140	COG0577	efflux transmembrane transporter activity
CP984_RS37140	COG1136	(ABC) transporter
CP984_RS37160	COG2226	methyltransferase
CP984_RS37165	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CP984_RS37170	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CP984_RS37175	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CP984_RS37220	COG0740	serine-type endopeptidase activity
CP984_RS37250	COG0831	urea catabolic process
CP984_RS37255	COG0832	Belongs to the urease beta subunit family
CP984_RS37260	COG0804	urea catabolic process
CP984_RS37265	COG0830	nickel cation binding
CP984_RS37270	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
CP984_RS37275	COG0829	nickel cation binding
CP984_RS37285	COG1309	transcriptional regulator
CP984_RS37290	COG0154	amidase activity
CP984_RS37295	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP984_RS37310	COG1960	acyl-CoA dehydrogenase activity
CP984_RS37315	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP984_RS37365	COG0604	alcohol dehydrogenase
CP984_RS37385	COG0431	NADPH-dependent FMN reductase
CP984_RS37410	COG1454	alcohol dehydrogenase
CP984_RS37415	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CP984_RS37420	COG1012	belongs to the aldehyde dehydrogenase family
CP984_RS37425	COG3903	Transcriptional regulator
CP984_RS37425	COG3629	intracellular signal transduction
CP984_RS37435	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CP984_RS37485	COG0702	epimerase
CP984_RS37500	COG1473	amidohydrolase
CP984_RS37505	COG3135	benzoate transporter
CP984_RS37520	COG2423	ornithine cyclodeaminase activity
CP984_RS37525	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CP984_RS37530	COG3629	intracellular signal transduction
CP984_RS37530	COG3903	Transcriptional regulator
CP984_RS37555	COG1063	alcohol dehydrogenase
CP984_RS37575	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CP984_RS37590	COG1609	Transcriptional regulator
CP984_RS37595	COG2222	sugar isomerase
CP984_RS37605	COG1653	transport
CP984_RS37610	COG1175	transmembrane transport
CP984_RS37615	COG0395	ABC-type sugar transport system, permease component
CP984_RS37620	COG1793	dna ligase
CP984_RS37625	COG1957	nucleoside hydrolase
CP984_RS37630	COG0477	Major facilitator Superfamily
CP984_RS37635	COG0596	Alpha beta hydrolase
CP984_RS37670	COG0205	6-phosphofructokinase activity
CP984_RS37675	COG3442	glutamine amidotransferase
CP984_RS37685	COG0242	peptide deformylase activity
CP984_RS37695	COG1960	acyl-CoA dehydrogenase activity
CP984_RS37720	COG0505	Belongs to the CarA family
CP984_RS37725	COG3960	tartronate-semialdehyde synthase activity
CP984_RS37730	COG3622	Belongs to the hyi family
CP984_RS37735	COG2084	Dehydrogenase
CP984_RS37750	COG1131	(ABC) transporter
CP984_RS37800	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP984_RS37815	COG2378	regulation of single-species biofilm formation
CP984_RS37845	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CP984_RS37855	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
CP984_RS37875	COG1191	sigma factor activity
CP984_RS37910	COG2124	cytochrome p450
CP984_RS37935	COG1653	transport
CP984_RS37950	COG0395	ABC-type sugar transport system, permease component
CP984_RS37985	COG0395	ABC-type sugar transport system, permease component
CP984_RS38020	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS38035	COG3284	Transcriptional regulator
CP984_RS38050	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP984_RS38085	COG2197	response regulator
CP984_RS38115	COG1657	PFAM Prenyltransferase squalene oxidase
CP984_RS38135	COG0142	geranyltranstransferase activity
CP984_RS38140	COG1482	cell wall glycoprotein biosynthetic process
CP984_RS38190	COG1012	belongs to the aldehyde dehydrogenase family
CP984_RS38195	COG2197	response regulator
CP984_RS38200	COG4977	sequence-specific DNA binding
CP984_RS38205	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CP984_RS38230	COG1063	alcohol dehydrogenase
CP984_RS38235	COG2207	Transcriptional regulator
CP984_RS38245	COG0328	RNA-DNA hybrid ribonuclease activity
CP984_RS38250	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
CP984_RS38275	COG1116	anion transmembrane transporter activity
CP984_RS38310	COG1316	TRANSCRIPTIONal
CP984_RS38345	COG0745	RESPONSE REGULATOR receiver
CP984_RS38355	COG4585	Histidine kinase
CP984_RS38360	COG2197	response regulator
CP984_RS38370	COG0438	transferase activity, transferring glycosyl groups
CP984_RS38470	COG2124	cytochrome p450
CP984_RS38485	COG0596	Alpha beta hydrolase
CP984_RS38550	COG0671	phosphoesterase, PA-phosphatase related
CP984_RS38580	COG4221	oxidoreductase activity
CP984_RS38595	COG0110	maltose O-acetyltransferase activity
CP984_RS38620	COG0367	asparagine synthase
CP984_RS38635	COG2124	cytochrome p450
CP984_RS38665	COG0583	DNA-binding transcription factor activity
CP984_RS38690	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS38690	COG0604	alcohol dehydrogenase
CP984_RS38690	COG3321	synthase
CP984_RS38705	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CP984_RS38730	COG2732	(Barnase) inhibitor
CP984_RS38810	COG0494	nUDIX hydrolase
CP984_RS38860	COG0596	Alpha beta hydrolase
CP984_RS38865	COG4221	oxidoreductase activity
CP984_RS38890	COG3848	Pyruvate phosphate dikinase
CP984_RS38890	COG0574	Belongs to the PEP-utilizing enzyme family
CP984_RS38925	COG1228	amidohydrolase
CP984_RS38930	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
CP984_RS38955	COG4106	trans-aconitate 2-methyltransferase activity
CP984_RS38995	COG2197	response regulator
CP984_RS39045	COG4247	3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase)
CP984_RS39060	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CP984_RS39070	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CP984_RS39100	COG2770	Histidine kinase
CP984_RS39100	COG2208	phosphoserine phosphatase activity
CP984_RS39110	COG2172	sigma factor antagonist activity
CP984_RS39115	COG1366	Belongs to the anti-sigma-factor antagonist family
CP984_RS39120	COG1366	Belongs to the anti-sigma-factor antagonist family
CP984_RS39125	COG1191	sigma factor activity
CP984_RS39150	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CP984_RS39165	COG2175	clavaminate synthase activity
CP984_RS39180	COG3903	Transcriptional regulator
CP984_RS39180	COG3629	intracellular signal transduction
CP984_RS39195	COG0583	DNA-binding transcription factor activity
CP984_RS39265	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS39270	COG2259	Doxx family
CP984_RS39340	COG0154	amidase activity
CP984_RS39345	COG0300	oxidoreductase activity
CP984_RS39355	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CP984_RS39395	COG0477	Major facilitator Superfamily
CP984_RS39405	COG2271	Major facilitator Superfamily
CP984_RS39415	COG0812	UDP-N-acetylmuramate dehydrogenase activity
CP984_RS39420	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP984_RS39425	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CP984_RS39445	COG0346	lactoylglutathione lyase activity
CP984_RS39470	COG0366	Alpha amylase catalytic
CP984_RS39485	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CP984_RS39495	COG0745	RESPONSE REGULATOR receiver
CP984_RS39500	COG2205	protein histidine kinase activity
CP984_RS39505	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP984_RS39520	COG1131	(ABC) transporter
CP984_RS39540	COG1191	sigma factor activity
CP984_RS39550	COG0596	Alpha beta hydrolase
CP984_RS39555	COG1309	transcriptional regulator
CP984_RS39560	COG0640	Transcriptional regulator
CP984_RS39565	COG0673	inositol 2-dehydrogenase activity
CP984_RS39585	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CP984_RS39595	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS39605	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CP984_RS39610	COG2124	cytochrome p450
CP984_RS39615	COG2124	cytochrome p450
CP984_RS39675	COG0657	acetylesterase activity
CP984_RS39680	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS39705	COG1960	acyl-CoA dehydrogenase activity
CP984_RS39715	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CP984_RS39730	COG0585	pseudouridine synthase activity
CP984_RS39770	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP984_RS39775	COG3251	PFAM MbtH domain protein
CP984_RS39795	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CP984_RS39800	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP984_RS39810	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP984_RS39820	COG0789	Transcriptional regulator
CP984_RS39840	COG0745	RESPONSE REGULATOR receiver
CP984_RS39845	COG2205	protein histidine kinase activity
CP984_RS39855	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CP984_RS39865	COG1181	Belongs to the D-alanine--D-alanine ligase family
CP984_RS39870	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
CP984_RS39905	COG2770	Histidine kinase
CP984_RS39905	COG2208	phosphoserine phosphatase activity
CP984_RS39910	COG0596	Alpha beta hydrolase
CP984_RS39915	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS39930	COG1301	dicarboxylic acid transport
CP984_RS39935	COG0473	3-isopropylmalate dehydrogenase activity
CP984_RS39940	COG0583	DNA-binding transcription factor activity
CP984_RS39990	COG0477	Major facilitator Superfamily
CP984_RS40035	COG2205	protein histidine kinase activity
CP984_RS40070	COG0583	DNA-binding transcription factor activity
CP984_RS40075	COG0384	phenazine biosynthesis protein PhzF
CP984_RS40150	COG0137	argininosuccinate synthase activity
CP984_RS40180	COG1028	Short-chain dehydrogenase reductase Sdr
CP984_RS40200	COG0456	acetyltransferase
CP984_RS40200	COG1214	PFAM Peptidase M22, glycoprotease
CP984_RS40220	COG0596	Alpha beta hydrolase
CP984_RS40230	COG2814	Major facilitator Superfamily
CP984_RS40240	COG0697	spore germination
CP984_RS40305	COG1254	Belongs to the acylphosphatase family
CP984_RS40320	COG0604	alcohol dehydrogenase
CP984_RS40325	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CP984_RS40370	COG1309	transcriptional regulator
CP984_RS40380	COG0251	oxidation-reduction process
CP984_RS40390	COG2022	thiamine diphosphate biosynthetic process
CP984_RS40390	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CP984_RS40445	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CP984_RS40455	COG0300	oxidoreductase activity
CP984_RS40460	COG0300	oxidoreductase activity
CP984_RS40470	COG2409	Drug exporters of the RND superfamily
CP984_RS40475	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CP984_RS40480	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CP984_RS40485	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CP984_RS40565	COG0513	Belongs to the DEAD box helicase family
CP984_RS40570	COG1278	Cold shock
CP984_RS40630	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CP984_RS40650	COG0300	oxidoreductase activity
CP984_RS40655	COG0583	DNA-binding transcription factor activity
CP984_RS40670	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CP984_RS40675	COG0443	Heat shock 70 kDa protein
CP984_RS40680	COG0484	heat shock protein binding
CP984_RS40755	COG1733	regulation of RNA biosynthetic process
CP984_RS40775	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CP984_RS40790	COG4106	trans-aconitate 2-methyltransferase activity
CP984_RS40815	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CP984_RS40820	COG2197	response regulator
CP984_RS40830	COG2318	DinB family
CP984_RS40840	COG2175	clavaminate synthase activity
CP984_RS40850	COG3479	Phenolic acid decarboxylase
CP984_RS40865	COG2264	protein methyltransferase activity
CP984_RS40895	COG1028	Short-chain dehydrogenase reductase Sdr