locus-tag class description SRIM_RS00050 PF08241 Methyltransferase domain SRIM_RS00090 PF05175 Methyltransferase small domain SRIM_RS00105 PF05870 Phenolic acid decarboxylase (PAD) SRIM_RS00115 PF02668 Taurine catabolism dioxygenase TauD, TfdA family SRIM_RS00125 PF04978 Protein of unknown function (DUF664) SRIM_RS00130 PF07730 Histidine kinase SRIM_RS00130 PF05384 Sensor protein DegS SRIM_RS00130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS00135 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS00135 PF00072 Response regulator receiver domain SRIM_RS00140 PF11954 Domain of unknown function (DUF3471) SRIM_RS00140 PF00144 Beta-lactamase SRIM_RS00160 PF01381 Helix-turn-helix SRIM_RS00160 PF08671 Anti-repressor SinI SRIM_RS00180 PF01761 3-dehydroquinate synthase SRIM_RS00205 PF01638 HxlR-like helix-turn-helix SRIM_RS00265 PF00011 Hsp20/alpha crystallin family SRIM_RS00280 PF00011 Hsp20/alpha crystallin family SRIM_RS00290 PF01556 DnaJ C terminal domain SRIM_RS00290 PF00684 DnaJ central domain SRIM_RS00290 PF00226 DnaJ domain SRIM_RS00295 PF00012 Hsp70 protein SRIM_RS00300 PF01025 GrpE SRIM_RS00320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS00320 PF03466 LysR substrate binding domain SRIM_RS00325 PF00106 short chain dehydrogenase SRIM_RS00330 PF07690 Major Facilitator Superfamily SRIM_RS00345 PF02223 Thymidylate kinase SRIM_RS00390 PF01494 FAD binding domain SRIM_RS00405 PF00313 'Cold-shock' DNA-binding domain SRIM_RS00410 PF00270 DEAD/DEAH box helicase SRIM_RS00410 PF00271 Helicase conserved C-terminal domain SRIM_RS00445 PF00144 Beta-lactamase SRIM_RS00485 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS00485 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS00490 PF00550 Phosphopantetheine attachment site SRIM_RS00495 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SRIM_RS00495 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SRIM_RS00500 PF03176 MMPL family SRIM_RS00505 PF11583 P-aminobenzoate N-oxygenase AurF SRIM_RS00510 PF00106 short chain dehydrogenase SRIM_RS00515 PF00106 short chain dehydrogenase SRIM_RS00520 PF01494 FAD binding domain SRIM_RS00525 PF00668 Condensation domain SRIM_RS00525 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS00525 PF00501 AMP-binding enzyme SRIM_RS00525 PF00550 Phosphopantetheine attachment site SRIM_RS00525 PF00975 Thioesterase domain SRIM_RS00530 PF00704 Glycosyl hydrolases family 18 SRIM_RS00580 PF01266 FAD dependent oxidoreductase SRIM_RS00580 PF05690 Thiazole biosynthesis protein ThiG SRIM_RS00590 PF01042 Endoribonuclease L-PSP SRIM_RS00600 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS00600 PF08359 YsiA-like protein, C-terminal region SRIM_RS00605 PF01593 Flavin containing amine oxidoreductase SRIM_RS00640 PF02515 CoA-transferase family III SRIM_RS00645 PF00107 Zinc-binding dehydrogenase SRIM_RS00645 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS00650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS00650 PF03466 LysR substrate binding domain SRIM_RS00660 PF00708 Acylphosphatase SRIM_RS00700 PF01526 Tn3 transposase DDE domain SRIM_RS00705 PF01526 Tn3 transposase DDE domain SRIM_RS00705 PF13700 Domain of unknown function (DUF4158) SRIM_RS00710 PF01526 Tn3 transposase DDE domain SRIM_RS00710 PF13700 Domain of unknown function (DUF4158) SRIM_RS00725 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading SRIM_RS00735 PF00892 EamA-like transporter family SRIM_RS00740 PF01638 HxlR-like helix-turn-helix SRIM_RS00745 PF07690 Major Facilitator Superfamily SRIM_RS00750 PF01965 DJ-1/PfpI family SRIM_RS00750 PF12833 Helix-turn-helix domain SRIM_RS00755 PF06441 Epoxide hydrolase N terminus SRIM_RS00770 PF00459 Inositol monophosphatase family SRIM_RS00775 PF00583 Acetyltransferase (GNAT) family SRIM_RS00775 PF00814 Glycoprotease family SRIM_RS00785 PF00144 Beta-lactamase SRIM_RS00825 PF00764 Arginosuccinate synthase SRIM_RS00845 PF01965 DJ-1/PfpI family SRIM_RS00855 PF01230 HIT domain SRIM_RS00865 PF00553 Cellulose binding domain SRIM_RS00865 PF00704 Glycosyl hydrolases family 18 SRIM_RS00865 PF00041 Fibronectin type III domain SRIM_RS00895 PF02567 Phenazine biosynthesis-like protein SRIM_RS00900 PF03466 LysR substrate binding domain SRIM_RS00900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS00910 PF13411 MerR HTH family regulatory protein SRIM_RS00920 PF07859 alpha/beta hydrolase fold SRIM_RS00930 PF00652 Ricin-type beta-trefoil lectin domain SRIM_RS00930 PF02983 Alpha-lytic protease prodomain SRIM_RS00935 PF00672 HAMP domain SRIM_RS00935 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS00935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS00940 PF00293 NUDIX domain SRIM_RS00950 PF04542 Sigma-70 region 2 SRIM_RS00950 PF04539 Sigma-70 region 3 SRIM_RS00950 PF04545 Sigma-70, region 4 SRIM_RS00955 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase SRIM_RS00960 PF01047 MarR family SRIM_RS00970 PF00730 HhH-GPD superfamily base excision DNA repair protein SRIM_RS00970 PF02805 Metal binding domain of Ada SRIM_RS00970 PF06029 AlkA N-terminal domain SRIM_RS00970 PF12833 Helix-turn-helix domain SRIM_RS00980 PF07690 Major Facilitator Superfamily SRIM_RS01025 PF03466 LysR substrate binding domain SRIM_RS01025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS01030 PF00180 Isocitrate/isopropylmalate dehydrogenase SRIM_RS01035 PF00375 Sodium:dicarboxylate symporter family SRIM_RS01040 PF01042 Endoribonuclease L-PSP SRIM_RS01055 PF12697 Alpha/beta hydrolase family SRIM_RS01060 PF07228 Stage II sporulation protein E (SpoIIE) SRIM_RS01060 PF00672 HAMP domain SRIM_RS01080 PF00732 GMC oxidoreductase SRIM_RS01080 PF05199 GMC oxidoreductase SRIM_RS01095 PF01427 D-ala-D-ala dipeptidase SRIM_RS01100 PF07478 D-ala D-ala ligase C-terminus SRIM_RS01100 PF01820 D-ala D-ala ligase N-terminus SRIM_RS01105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SRIM_RS01105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SRIM_RS01110 PF01225 Mur ligase family, catalytic domain SRIM_RS01110 PF02875 Mur ligase family, glutamate ligase domain SRIM_RS01110 PF08245 Mur ligase middle domain SRIM_RS01120 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS01120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS01120 PF00672 HAMP domain SRIM_RS01125 PF00072 Response regulator receiver domain SRIM_RS01125 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS01145 PF13411 MerR HTH family regulatory protein SRIM_RS01145 PF07739 TipAS antibiotic-recognition domain SRIM_RS01150 PF05721 Phytanoyl-CoA dioxygenase (PhyH) SRIM_RS01155 PF00975 Thioesterase domain SRIM_RS01155 PF00501 AMP-binding enzyme SRIM_RS01155 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS01155 PF00668 Condensation domain SRIM_RS01155 PF00550 Phosphopantetheine attachment site SRIM_RS01165 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS01165 PF00501 AMP-binding enzyme SRIM_RS01170 PF00291 Pyridoxal-phosphate dependent enzyme SRIM_RS01185 PF00668 Condensation domain SRIM_RS01185 PF00501 AMP-binding enzyme SRIM_RS01185 PF00975 Thioesterase domain SRIM_RS01185 PF00550 Phosphopantetheine attachment site SRIM_RS01185 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS01190 PF03621 MbtH-like protein SRIM_RS01195 PF00550 Phosphopantetheine attachment site SRIM_RS01195 PF00975 Thioesterase domain SRIM_RS01195 PF00668 Condensation domain SRIM_RS01195 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS01195 PF00501 AMP-binding enzyme SRIM_RS01200 PF00501 AMP-binding enzyme SRIM_RS01200 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS01200 PF00668 Condensation domain SRIM_RS01200 PF00550 Phosphopantetheine attachment site SRIM_RS01200 PF00975 Thioesterase domain SRIM_RS01205 PF00067 Cytochrome P450 SRIM_RS01235 PF01142 tRNA pseudouridine synthase D (TruD) SRIM_RS01240 PF05199 GMC oxidoreductase SRIM_RS01240 PF00732 GMC oxidoreductase SRIM_RS01250 PF00202 Aminotransferase class-III SRIM_RS01260 PF08028 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS01260 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS01260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS01280 PF00561 alpha/beta hydrolase fold SRIM_RS01290 PF07859 alpha/beta hydrolase fold SRIM_RS01350 PF00067 Cytochrome P450 SRIM_RS01355 PF00067 Cytochrome P450 SRIM_RS01360 PF17760 UvrA interaction domain SRIM_RS01360 PF17755 UvrA DNA-binding domain SRIM_RS01360 PF00005 ABC transporter SRIM_RS01365 PF02909 Tetracyclin repressor-like, C-terminal domain SRIM_RS01365 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS01385 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SRIM_RS01385 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SRIM_RS01395 PF01494 FAD binding domain SRIM_RS01405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SRIM_RS01410 PF01022 Bacterial regulatory protein, arsR family SRIM_RS01415 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS01415 PF13305 Tetracyclin repressor-like, C-terminal domain SRIM_RS01420 PF00561 alpha/beta hydrolase fold SRIM_RS01430 PF04542 Sigma-70 region 2 SRIM_RS01430 PF04539 Sigma-70 region 3 SRIM_RS01430 PF04545 Sigma-70, region 4 SRIM_RS01450 PF00005 ABC transporter SRIM_RS01455 PF00501 AMP-binding enzyme SRIM_RS01455 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS01455 PF00668 Condensation domain SRIM_RS01455 PF00550 Phosphopantetheine attachment site SRIM_RS01460 PF00668 Condensation domain SRIM_RS01460 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS01460 PF00501 AMP-binding enzyme SRIM_RS01460 PF00550 Phosphopantetheine attachment site SRIM_RS01465 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS01465 PF00501 AMP-binding enzyme SRIM_RS01465 PF00550 Phosphopantetheine attachment site SRIM_RS01465 PF00975 Thioesterase domain SRIM_RS01465 PF00668 Condensation domain SRIM_RS01470 PF00672 HAMP domain SRIM_RS01470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS01470 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS01475 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS01475 PF00072 Response regulator receiver domain SRIM_RS01485 PF00912 Transglycosylase SRIM_RS01485 PF00905 Penicillin binding protein transpeptidase domain SRIM_RS01495 PF12671 Putative amidase domain SRIM_RS01500 PF00128 Alpha amylase, catalytic domain SRIM_RS01505 PF12592 Protein of unknown function (DUF3763) SRIM_RS01505 PF07728 AAA domain (dynein-related subfamily) SRIM_RS01505 PF17868 AAA lid domain SRIM_RS01510 PF05762 VWA domain containing CoxE-like protein SRIM_RS01525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SRIM_RS01540 PF01032 FecCD transport family SRIM_RS01545 PF01032 FecCD transport family SRIM_RS01550 PF01565 FAD binding domain SRIM_RS01550 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SRIM_RS01560 PF07690 Major Facilitator Superfamily SRIM_RS01570 PF07690 Major Facilitator Superfamily SRIM_RS01580 PF00550 Phosphopantetheine attachment site SRIM_RS01580 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS01580 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS01580 PF00668 Condensation domain SRIM_RS01580 PF00698 Acyl transferase domain SRIM_RS01580 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS01585 PF16350 FAD dependent oxidoreductase central domain SRIM_RS01585 PF01571 Aminomethyltransferase folate-binding domain SRIM_RS01585 PF08669 Glycine cleavage T-protein C-terminal barrel domain SRIM_RS01585 PF01266 FAD dependent oxidoreductase SRIM_RS01590 PF00975 Thioesterase domain SRIM_RS01595 PF00501 AMP-binding enzyme SRIM_RS01595 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS01600 PF00550 Phosphopantetheine attachment site SRIM_RS01605 PF02195 ParB-like nuclease domain SRIM_RS01610 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SRIM_RS01620 PF00106 short chain dehydrogenase SRIM_RS01625 PF01425 Amidase SRIM_RS01635 PF03129 Anticodon binding domain SRIM_RS01635 PF02824 TGS domain SRIM_RS01635 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SRIM_RS01635 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SRIM_RS01670 PF00107 Zinc-binding dehydrogenase SRIM_RS01670 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS01690 PF07681 DoxX SRIM_RS01705 PF04055 Radical SAM superfamily SRIM_RS01735 PF01494 FAD binding domain SRIM_RS01745 PF01636 Phosphotransferase enzyme family SRIM_RS01765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS01765 PF03466 LysR substrate binding domain SRIM_RS01780 PF03704 Bacterial transcriptional activator domain SRIM_RS01780 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS01780 PF00931 NB-ARC domain SRIM_RS01795 PF02668 Taurine catabolism dioxygenase TauD, TfdA family SRIM_RS01800 PF01925 Sulfite exporter TauE/SafE SRIM_RS01805 PF01070 FMN-dependent dehydrogenase SRIM_RS01810 PF00155 Aminotransferase class I and II SRIM_RS01810 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS01835 PF04542 Sigma-70 region 2 SRIM_RS01835 PF04539 Sigma-70 region 3 SRIM_RS01835 PF04545 Sigma-70, region 4 SRIM_RS01840 PF01740 STAS domain SRIM_RS01840 PF08678 Rsbr N terminal SRIM_RS01845 PF01740 STAS domain SRIM_RS01850 PF13581 Histidine kinase-like ATPase domain SRIM_RS01860 PF07228 Stage II sporulation protein E (SpoIIE) SRIM_RS01860 PF00672 HAMP domain SRIM_RS01890 PF02525 Flavodoxin-like fold SRIM_RS01895 PF04542 Sigma-70 region 2 SRIM_RS01895 PF08281 Sigma-70, region 4 SRIM_RS01900 PF01177 Asp/Glu/Hydantoin racemase SRIM_RS01910 PF03466 LysR substrate binding domain SRIM_RS01910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS01915 PF02333 Phytase SRIM_RS01925 PF07690 Major Facilitator Superfamily SRIM_RS01955 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS01955 PF13185 GAF domain SRIM_RS01995 PF13649 Methyltransferase domain SRIM_RS02020 PF04072 Leucine carboxyl methyltransferase SRIM_RS02025 PF01979 Amidohydrolase family SRIM_RS02040 PF03756 A-factor biosynthesis hotdog domain SRIM_RS02050 PF00391 PEP-utilising enzyme, mobile domain SRIM_RS02050 PF01370 NAD dependent epimerase/dehydratase family SRIM_RS02060 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SRIM_RS02060 PF00391 PEP-utilising enzyme, mobile domain SRIM_RS02065 PF00067 Cytochrome P450 SRIM_RS02085 PF00106 short chain dehydrogenase SRIM_RS02090 PF00561 alpha/beta hydrolase fold SRIM_RS02135 PF00293 NUDIX domain SRIM_RS02150 PF05977 Transmembrane secretion effector SRIM_RS02170 PF00550 Phosphopantetheine attachment site SRIM_RS02170 PF07993 Male sterility protein SRIM_RS02170 PF00501 AMP-binding enzyme SRIM_RS02205 PF01337 Barstar (barnase inhibitor) SRIM_RS02235 PF00732 GMC oxidoreductase SRIM_RS02235 PF05199 GMC oxidoreductase SRIM_RS02240 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS02240 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS02240 PF00698 Acyl transferase domain SRIM_RS02240 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS02240 PF08659 KR domain SRIM_RS02240 PF00550 Phosphopantetheine attachment site SRIM_RS02240 PF14765 Polyketide synthase dehydratase SRIM_RS02240 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS02240 PF00107 Zinc-binding dehydrogenase SRIM_RS02255 PF01494 FAD binding domain SRIM_RS02260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS02260 PF03466 LysR substrate binding domain SRIM_RS02280 PF03704 Bacterial transcriptional activator domain SRIM_RS02290 PF00067 Cytochrome P450 SRIM_RS02305 PF13537 Glutamine amidotransferase domain SRIM_RS02305 PF00733 Asparagine synthase SRIM_RS02330 PF12464 Maltose acetyltransferase SRIM_RS02330 PF14602 Hexapeptide repeat of succinyl-transferase SRIM_RS02350 PF00106 short chain dehydrogenase SRIM_RS02370 PF00795 Carbon-nitrogen hydrolase SRIM_RS02380 PF01569 PAP2 superfamily SRIM_RS02405 PF04185 Phosphoesterase family SRIM_RS02405 PF05506 Domain of unknown function (DUF756) SRIM_RS02420 PF13556 PucR C-terminal helix-turn-helix domain SRIM_RS02420 PF07905 Purine catabolism regulatory protein-like family SRIM_RS02430 PF00106 short chain dehydrogenase SRIM_RS02440 PF00067 Cytochrome P450 SRIM_RS02445 PF12697 Alpha/beta hydrolase family SRIM_RS02455 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS02455 PF14759 Reductase C-terminal SRIM_RS02460 PF00067 Cytochrome P450 SRIM_RS02505 PF00011 Hsp20/alpha crystallin family SRIM_RS02555 PF17103 Stealth protein CR4, conserved region 4 SRIM_RS02555 PF11380 Stealth protein CR2, conserved region 2 SRIM_RS02555 PF17102 Stealth protein CR3, conserved region 3 SRIM_RS02555 PF00534 Glycosyl transferases group 1 SRIM_RS02555 PF17101 Stealth protein CR1, conserved region 1 SRIM_RS02565 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS02565 PF00072 Response regulator receiver domain SRIM_RS02570 PF07730 Histidine kinase SRIM_RS02575 PF01774 UreD urease accessory protein SRIM_RS02585 PF00072 Response regulator receiver domain SRIM_RS02585 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS02615 PF00553 Cellulose binding domain SRIM_RS02615 PF01341 Glycosyl hydrolases family 6 SRIM_RS02620 PF03816 Cell envelope-related transcriptional attenuator domain SRIM_RS02640 PF00041 Fibronectin type III domain SRIM_RS02640 PF00704 Glycosyl hydrolases family 18 SRIM_RS02655 PF00005 ABC transporter SRIM_RS02680 PF00561 alpha/beta hydrolase fold SRIM_RS02685 PF00075 RNase H SRIM_RS02695 PF14525 AraC-binding-like domain SRIM_RS02695 PF12833 Helix-turn-helix domain SRIM_RS02700 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS02700 PF00107 Zinc-binding dehydrogenase SRIM_RS02720 PF00696 Amino acid kinase family SRIM_RS02720 PF13840 ACT domain SRIM_RS02725 PF01118 Semialdehyde dehydrogenase, NAD binding domain SRIM_RS02725 PF02774 Semialdehyde dehydrogenase, dimerisation domain SRIM_RS02730 PF01965 DJ-1/PfpI family SRIM_RS02730 PF12833 Helix-turn-helix domain SRIM_RS02735 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS02735 PF00072 Response regulator receiver domain SRIM_RS02740 PF00171 Aldehyde dehydrogenase family SRIM_RS02745 PF00465 Iron-containing alcohol dehydrogenase SRIM_RS02785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SRIM_RS02795 PF01238 Phosphomannose isomerase type I SRIM_RS02800 PF00348 Polyprenyl synthetase SRIM_RS02810 PF00005 ABC transporter SRIM_RS02820 PF13249 Squalene-hopene cyclase N-terminal domain SRIM_RS02820 PF13243 Squalene-hopene cyclase C-terminal domain SRIM_RS02850 PF00072 Response regulator receiver domain SRIM_RS02850 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS02875 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SRIM_RS02875 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SRIM_RS02880 PF00501 AMP-binding enzyme SRIM_RS02880 PF00550 Phosphopantetheine attachment site SRIM_RS02880 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS02880 PF00668 Condensation domain SRIM_RS02885 PF00668 Condensation domain SRIM_RS02885 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS02885 PF00501 AMP-binding enzyme SRIM_RS02885 PF00975 Thioesterase domain SRIM_RS02885 PF00550 Phosphopantetheine attachment site SRIM_RS02890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS02890 PF03466 LysR substrate binding domain SRIM_RS02900 PF02954 Bacterial regulatory protein, Fis family SRIM_RS02920 PF00106 short chain dehydrogenase SRIM_RS02925 PF05139 Erythromycin esterase SRIM_RS02940 PF00455 DeoR C terminal sensor domain SRIM_RS02940 PF08220 DeoR-like helix-turn-helix domain SRIM_RS02950 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS02955 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS02960 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS02960 PF00107 Zinc-binding dehydrogenase SRIM_RS02985 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS02990 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS02995 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS03005 PF01547 Bacterial extracellular solute-binding protein SRIM_RS03030 PF00067 Cytochrome P450 SRIM_RS03035 PF00550 Phosphopantetheine attachment site SRIM_RS03035 PF00698 Acyl transferase domain SRIM_RS03035 PF00668 Condensation domain SRIM_RS03035 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS03035 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS03035 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS03040 PF00975 Thioesterase domain SRIM_RS03040 PF00550 Phosphopantetheine attachment site SRIM_RS03040 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS03040 PF00501 AMP-binding enzyme SRIM_RS03040 PF00668 Condensation domain SRIM_RS03050 PF08241 Methyltransferase domain SRIM_RS03055 PF00067 Cytochrome P450 SRIM_RS03065 PF04545 Sigma-70, region 4 SRIM_RS03065 PF04539 Sigma-70 region 3 SRIM_RS03065 PF04542 Sigma-70 region 2 SRIM_RS03080 PF00135 Carboxylesterase family SRIM_RS03085 PF10996 Beta-Casp domain SRIM_RS03085 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SRIM_RS03085 PF00753 Metallo-beta-lactamase superfamily SRIM_RS03095 PF02585 GlcNAc-PI de-N-acetylase SRIM_RS03110 PF03781 Sulfatase-modifying factor enzyme 1 SRIM_RS03115 PF00689 Cation transporting ATPase, C-terminus SRIM_RS03125 PF13280 WYL domain SRIM_RS03125 PF08279 HTH domain SRIM_RS03140 PF00668 Condensation domain SRIM_RS03140 PF00501 AMP-binding enzyme SRIM_RS03140 PF00975 Thioesterase domain SRIM_RS03140 PF00550 Phosphopantetheine attachment site SRIM_RS03140 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS03190 PF00005 ABC transporter SRIM_RS03205 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SRIM_RS03205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SRIM_RS03210 PF01261 Xylose isomerase-like TIM barrel SRIM_RS03215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SRIM_RS03215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SRIM_RS03215 PF00205 Thiamine pyrophosphate enzyme, central domain SRIM_RS03220 PF00117 Glutamine amidotransferase class-I SRIM_RS03220 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SRIM_RS03230 PF00561 alpha/beta hydrolase fold SRIM_RS03245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS03245 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS03245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS03255 PF01327 Polypeptide deformylase SRIM_RS03260 PF08245 Mur ligase middle domain SRIM_RS03260 PF08353 Domain of unknown function (DUF1727) SRIM_RS03265 PF07685 CobB/CobQ-like glutamine amidotransferase domain SRIM_RS03270 PF00365 Phosphofructokinase SRIM_RS03275 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) SRIM_RS03275 PF05425 Copper resistance protein D SRIM_RS03310 PF12697 Alpha/beta hydrolase family SRIM_RS03315 PF07690 Major Facilitator Superfamily SRIM_RS03320 PF01156 Inosine-uridine preferring nucleoside hydrolase SRIM_RS03325 PF04679 ATP dependent DNA ligase C terminal region SRIM_RS03325 PF01068 ATP dependent DNA ligase domain SRIM_RS03330 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS03335 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS03340 PF01547 Bacterial extracellular solute-binding protein SRIM_RS03350 PF01380 SIS domain SRIM_RS03355 PF00356 Bacterial regulatory proteins, lacI family SRIM_RS03370 PF01757 Acyltransferase family SRIM_RS03390 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS03390 PF00107 Zinc-binding dehydrogenase SRIM_RS03395 PF07228 Stage II sporulation protein E (SpoIIE) SRIM_RS03395 PF13581 Histidine kinase-like ATPase domain SRIM_RS03395 PF13466 STAS domain SRIM_RS03395 PF08448 PAS fold SRIM_RS03415 PF03704 Bacterial transcriptional activator domain SRIM_RS03415 PF00931 NB-ARC domain SRIM_RS03415 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS03420 PF00291 Pyridoxal-phosphate dependent enzyme SRIM_RS03425 PF02423 Ornithine cyclodeaminase/mu-crystallin family SRIM_RS03435 PF01053 Cys/Met metabolism PLP-dependent enzyme SRIM_RS03440 PF03594 Benzoate membrane transport protein SRIM_RS03445 PF07687 Peptidase dimerisation domain SRIM_RS03445 PF01546 Peptidase family M20/M25/M40 SRIM_RS03450 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS03460 PF01370 NAD dependent epimerase/dehydratase family SRIM_RS03475 PF02983 Alpha-lytic protease prodomain SRIM_RS03475 PF00089 Trypsin SRIM_RS03485 PF00561 alpha/beta hydrolase fold SRIM_RS03510 PF08267 Cobalamin-independent synthase, N-terminal domain SRIM_RS03510 PF01717 Cobalamin-independent synthase, Catalytic domain SRIM_RS03515 PF01553 Acyltransferase SRIM_RS03520 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS03520 PF00931 NB-ARC domain SRIM_RS03520 PF03704 Bacterial transcriptional activator domain SRIM_RS03525 PF00171 Aldehyde dehydrogenase family SRIM_RS03530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SRIM_RS03530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SRIM_RS03535 PF00465 Iron-containing alcohol dehydrogenase SRIM_RS03550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SRIM_RS03550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SRIM_RS03560 PF03358 NADPH-dependent FMN reductase SRIM_RS03580 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS03580 PF00107 Zinc-binding dehydrogenase SRIM_RS03585 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS03610 PF00561 alpha/beta hydrolase fold SRIM_RS03630 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS03630 PF00668 Condensation domain SRIM_RS03630 PF00550 Phosphopantetheine attachment site SRIM_RS03630 PF00501 AMP-binding enzyme SRIM_RS03635 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS03635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS03635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS03640 PF00501 AMP-binding enzyme SRIM_RS03640 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS03640 PF00550 Phosphopantetheine attachment site SRIM_RS03640 PF07993 Male sterility protein SRIM_RS03640 PF00668 Condensation domain SRIM_RS03645 PF00550 Phosphopantetheine attachment site SRIM_RS03645 PF00501 AMP-binding enzyme SRIM_RS03645 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS03645 PF00668 Condensation domain SRIM_RS03650 PF00501 AMP-binding enzyme SRIM_RS03650 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS03650 PF00668 Condensation domain SRIM_RS03650 PF00550 Phosphopantetheine attachment site SRIM_RS03655 PF01425 Amidase SRIM_RS03660 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS03670 PF01774 UreD urease accessory protein SRIM_RS03675 PF02492 CobW/HypB/UreG, nucleotide-binding domain SRIM_RS03680 PF01730 UreF SRIM_RS03685 PF00449 Urease alpha-subunit, N-terminal domain SRIM_RS03685 PF01979 Amidohydrolase family SRIM_RS03690 PF00699 Urease beta subunit SRIM_RS03695 PF00547 Urease, gamma subunit SRIM_RS03700 PF01483 Proprotein convertase P-domain SRIM_RS03700 PF04389 Peptidase family M28 SRIM_RS03725 PF00574 Clp protease SRIM_RS03735 PF00877 NlpC/P60 family SRIM_RS03765 PF00155 Aminotransferase class I and II SRIM_RS03770 PF04055 Radical SAM superfamily SRIM_RS03770 PF06968 Biotin and Thiamin Synthesis associated domain SRIM_RS03775 PF00202 Aminotransferase class-III SRIM_RS03785 PF01209 ubiE/COQ5 methyltransferase family SRIM_RS03805 PF12704 MacB-like periplasmic core domain SRIM_RS03805 PF00005 ABC transporter SRIM_RS03805 PF02687 FtsX-like permease family SRIM_RS03810 PF02687 FtsX-like permease family SRIM_RS03810 PF12704 MacB-like periplasmic core domain SRIM_RS03815 PF00296 Luciferase-like monooxygenase SRIM_RS03825 PF01595 Cyclin M transmembrane N-terminal domain SRIM_RS03825 PF03471 Transporter associated domain SRIM_RS03825 PF00571 CBS domain SRIM_RS03830 PF01595 Cyclin M transmembrane N-terminal domain SRIM_RS03830 PF00571 CBS domain SRIM_RS03855 PF03466 LysR substrate binding domain SRIM_RS03855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS03870 PF10397 Adenylosuccinate lyase C-terminus SRIM_RS03870 PF00206 Lyase SRIM_RS03875 PF03167 Uracil DNA glycosylase superfamily SRIM_RS03880 PF08946 Osmosensory transporter coiled coil SRIM_RS03880 PF00083 Sugar (and other) transporter SRIM_RS03890 PF00480 ROK family SRIM_RS03905 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS03905 PF07702 UTRA domain SRIM_RS03910 PF04542 Sigma-70 region 2 SRIM_RS03910 PF08281 Sigma-70, region 4 SRIM_RS03910 PF12680 SnoaL-like domain SRIM_RS03915 PF12697 Alpha/beta hydrolase family SRIM_RS03930 PF02983 Alpha-lytic protease prodomain SRIM_RS03935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS03935 PF03466 LysR substrate binding domain SRIM_RS03950 PF01209 ubiE/COQ5 methyltransferase family SRIM_RS03955 PF00581 Rhodanese-like domain SRIM_RS03960 PF01037 Lrp/AsnC ligand binding domain SRIM_RS03965 PF13476 AAA domain SRIM_RS03970 PF00149 Calcineurin-like phosphoesterase SRIM_RS03970 PF12320 Type 5 capsule protein repressor C-terminal domain SRIM_RS03985 PF00005 ABC transporter SRIM_RS03985 PF00664 ABC transporter transmembrane region SRIM_RS03995 PF00324 Amino acid permease SRIM_RS04005 PF02467 Transcription factor WhiB SRIM_RS04015 PF10502 Signal peptidase, peptidase S26 SRIM_RS04025 PF07993 Male sterility protein SRIM_RS04025 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS04025 PF00501 AMP-binding enzyme SRIM_RS04025 PF00668 Condensation domain SRIM_RS04025 PF00550 Phosphopantetheine attachment site SRIM_RS04075 PF00248 Aldo/keto reductase family SRIM_RS04100 PF04324 BFD-like [2Fe-2S] binding domain SRIM_RS04100 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS04100 PF13806 Rieske-like [2Fe-2S] domain SRIM_RS04100 PF18267 Rubredoxin NAD+ reductase C-terminal domain SRIM_RS04100 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SRIM_RS04100 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SRIM_RS04115 PF04055 Radical SAM superfamily SRIM_RS04120 PF02901 Pyruvate formate lyase-like SRIM_RS04120 PF01228 Glycine radical SRIM_RS04130 PF12900 Pyridoxamine 5'-phosphate oxidase SRIM_RS04135 PF07730 Histidine kinase SRIM_RS04135 PF13185 GAF domain SRIM_RS04135 PF13492 GAF domain SRIM_RS04135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS04140 PF00478 IMP dehydrogenase / GMP reductase domain SRIM_RS04140 PF00571 CBS domain SRIM_RS04145 PF00072 Response regulator receiver domain SRIM_RS04145 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS04150 PF02613 Nitrate reductase delta subunit SRIM_RS04150 PF00384 Molybdopterin oxidoreductase SRIM_RS04150 PF02665 Nitrate reductase gamma subunit SRIM_RS04160 PF13247 4Fe-4S dicluster domain SRIM_RS04160 PF14711 Respiratory nitrate reductase beta C-terminal SRIM_RS04165 PF01568 Molydopterin dinucleotide binding domain SRIM_RS04165 PF00384 Molybdopterin oxidoreductase SRIM_RS04170 PF01593 Flavin containing amine oxidoreductase SRIM_RS04175 PF07690 Major Facilitator Superfamily SRIM_RS04180 PF02665 Nitrate reductase gamma subunit SRIM_RS04185 PF02613 Nitrate reductase delta subunit SRIM_RS04190 PF13247 4Fe-4S dicluster domain SRIM_RS04190 PF14711 Respiratory nitrate reductase beta C-terminal SRIM_RS04195 PF01568 Molydopterin dinucleotide binding domain SRIM_RS04195 PF00384 Molybdopterin oxidoreductase SRIM_RS04200 PF04055 Radical SAM superfamily SRIM_RS04200 PF13186 Iron-sulfur cluster-binding domain SRIM_RS04205 PF00583 Acetyltransferase (GNAT) family SRIM_RS04210 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SRIM_RS04210 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SRIM_RS04215 PF01070 FMN-dependent dehydrogenase SRIM_RS04225 PF00501 AMP-binding enzyme SRIM_RS04225 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS04225 PF00668 Condensation domain SRIM_RS04225 PF00550 Phosphopantetheine attachment site SRIM_RS04225 PF00975 Thioesterase domain SRIM_RS04235 PF00975 Thioesterase domain SRIM_RS04235 PF00668 Condensation domain SRIM_RS04235 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS04235 PF00550 Phosphopantetheine attachment site SRIM_RS04235 PF00501 AMP-binding enzyme SRIM_RS04250 PF00975 Thioesterase domain SRIM_RS04250 PF00501 AMP-binding enzyme SRIM_RS04250 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS04250 PF00668 Condensation domain SRIM_RS04250 PF08241 Methyltransferase domain SRIM_RS04250 PF00391 PEP-utilising enzyme, mobile domain SRIM_RS04250 PF00550 Phosphopantetheine attachment site SRIM_RS04260 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS04260 PF00698 Acyl transferase domain SRIM_RS04260 PF00668 Condensation domain SRIM_RS04260 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS04260 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS04260 PF00550 Phosphopantetheine attachment site SRIM_RS04265 PF00550 Phosphopantetheine attachment site SRIM_RS04265 PF00668 Condensation domain SRIM_RS04265 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS04265 PF00501 AMP-binding enzyme SRIM_RS04270 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS04270 PF00107 Zinc-binding dehydrogenase SRIM_RS04280 PF00202 Aminotransferase class-III SRIM_RS04285 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SRIM_RS04290 PF07676 WD40-like Beta Propeller Repeat SRIM_RS04300 PF10282 Lactonase, 7-bladed beta-propeller SRIM_RS04305 PF01740 STAS domain SRIM_RS04305 PF00916 Sulfate permease family SRIM_RS04310 PF00781 Diacylglycerol kinase catalytic domain SRIM_RS04315 PF01494 FAD binding domain SRIM_RS04320 PF01047 MarR family SRIM_RS04335 PF12800 4Fe-4S binding domain SRIM_RS04335 PF13247 4Fe-4S dicluster domain SRIM_RS04340 PF00384 Molybdopterin oxidoreductase SRIM_RS04340 PF01568 Molydopterin dinucleotide binding domain SRIM_RS04340 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SRIM_RS04345 PF01276 Orn/Lys/Arg decarboxylase, major domain SRIM_RS04345 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SRIM_RS04350 PF00857 Isochorismatase family SRIM_RS04375 PF00144 Beta-lactamase SRIM_RS04380 PF09186 Domain of unknown function (DUF1949) SRIM_RS04380 PF01205 Uncharacterized protein family UPF0029 SRIM_RS04385 PF13380 CoA binding domain SRIM_RS04420 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS04425 PF00067 Cytochrome P450 SRIM_RS04430 PF11258 Protein of unknown function (DUF3048) N-terminal domain SRIM_RS04430 PF17479 Protein of unknown function (DUF3048) C-terminal domain SRIM_RS04440 PF00132 Bacterial transferase hexapeptide (six repeats) SRIM_RS04470 PF00106 short chain dehydrogenase SRIM_RS04495 PF02541 Ppx/GppA phosphatase family SRIM_RS04500 PF01740 STAS domain SRIM_RS04510 PF04679 ATP dependent DNA ligase C terminal region SRIM_RS04510 PF01068 ATP dependent DNA ligase domain SRIM_RS04510 PF13298 DNA polymerase Ligase (LigD) SRIM_RS04515 PF00132 Bacterial transferase hexapeptide (six repeats) SRIM_RS04530 PF09335 SNARE associated Golgi protein SRIM_RS04555 PF03143 Elongation factor Tu C-terminal domain SRIM_RS04555 PF00009 Elongation factor Tu GTP binding domain SRIM_RS04555 PF03144 Elongation factor Tu domain 2 SRIM_RS04570 PF02673 Bacitracin resistance protein BacA SRIM_RS04590 PF00672 HAMP domain SRIM_RS04590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS04590 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS04595 PF00072 Response regulator receiver domain SRIM_RS04595 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS04600 PF13439 Glycosyltransferase Family 4 SRIM_RS04600 PF00534 Glycosyl transferases group 1 SRIM_RS04605 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS04615 PF13411 MerR HTH family regulatory protein SRIM_RS04620 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SRIM_RS04620 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS04650 PF04542 Sigma-70 region 2 SRIM_RS04650 PF08281 Sigma-70, region 4 SRIM_RS04665 PF04542 Sigma-70 region 2 SRIM_RS04665 PF08281 Sigma-70, region 4 SRIM_RS04670 PF03795 YCII-related domain SRIM_RS04700 PF03466 LysR substrate binding domain SRIM_RS04700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS04715 PF00679 Elongation factor G C-terminus SRIM_RS04715 PF14492 Elongation Factor G, domain II SRIM_RS04715 PF03764 Elongation factor G, domain IV SRIM_RS04715 PF00009 Elongation factor Tu GTP binding domain SRIM_RS04715 PF03144 Elongation factor Tu domain 2 SRIM_RS04740 PF13532 2OG-Fe(II) oxygenase superfamily SRIM_RS04760 PF01613 Flavin reductase like domain SRIM_RS04765 PF13229 Right handed beta helix region SRIM_RS04775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS04775 PF03466 LysR substrate binding domain SRIM_RS04785 PF02868 Thermolysin metallopeptidase, alpha-helical domain SRIM_RS04785 PF01447 Thermolysin metallopeptidase, catalytic domain SRIM_RS04785 PF07504 Fungalysin/Thermolysin Propeptide Motif SRIM_RS04785 PF01483 Proprotein convertase P-domain SRIM_RS04805 PF00672 HAMP domain SRIM_RS04805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS04805 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS04810 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase SRIM_RS04815 PF07729 FCD domain SRIM_RS04815 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS04820 PF18496 Collagenase G catalytic helper subdomain SRIM_RS04820 PF01752 Collagenase SRIM_RS04820 PF08453 Peptidase family M9 N-terminal SRIM_RS04825 PF13520 Amino acid permease SRIM_RS04830 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SRIM_RS04835 PF00291 Pyridoxal-phosphate dependent enzyme SRIM_RS04840 PF00266 Aminotransferase class-V SRIM_RS04855 PF04542 Sigma-70 region 2 SRIM_RS04855 PF04539 Sigma-70 region 3 SRIM_RS04855 PF04545 Sigma-70, region 4 SRIM_RS04860 PF00199 Catalase SRIM_RS04860 PF06628 Catalase-related immune-responsive SRIM_RS04860 PF18011 C-terminal domain found in long catalases SRIM_RS04875 PF18844 Bacterial archaeo-eukaryotic release factor family 2 SRIM_RS04885 PF13520 Amino acid permease SRIM_RS04890 PF00561 alpha/beta hydrolase fold SRIM_RS04930 PF00140 Sigma-70 factor, region 1.2 SRIM_RS04930 PF04542 Sigma-70 region 2 SRIM_RS04930 PF04539 Sigma-70 region 3 SRIM_RS04930 PF04545 Sigma-70, region 4 SRIM_RS04935 PF01804 Penicillin amidase SRIM_RS04945 PF01546 Peptidase family M20/M25/M40 SRIM_RS04945 PF07687 Peptidase dimerisation domain SRIM_RS04950 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase SRIM_RS04955 PF00255 Glutathione peroxidase SRIM_RS04965 PF07730 Histidine kinase SRIM_RS04965 PF13185 GAF domain SRIM_RS04965 PF13492 GAF domain SRIM_RS04965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS04970 PF02040 Arsenical pump membrane protein SRIM_RS04975 PF00583 Acetyltransferase (GNAT) family SRIM_RS04980 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS04985 PF01022 Bacterial regulatory protein, arsR family SRIM_RS04995 PF00005 ABC transporter SRIM_RS04995 PF00664 ABC transporter transmembrane region SRIM_RS05005 PF00795 Carbon-nitrogen hydrolase SRIM_RS05010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SRIM_RS05015 PF01494 FAD binding domain SRIM_RS05030 PF03167 Uracil DNA glycosylase superfamily SRIM_RS05035 PF00248 Aldo/keto reductase family SRIM_RS05060 PF01425 Amidase SRIM_RS05085 PF00106 short chain dehydrogenase SRIM_RS05095 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS05105 PF07478 D-ala D-ala ligase C-terminus SRIM_RS05105 PF01820 D-ala D-ala ligase N-terminus SRIM_RS05110 PF01638 HxlR-like helix-turn-helix SRIM_RS05115 PF00155 Aminotransferase class I and II SRIM_RS05135 PF07676 WD40-like Beta Propeller Repeat SRIM_RS05135 PF00326 Prolyl oligopeptidase family SRIM_RS05155 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS05155 PF00501 AMP-binding enzyme SRIM_RS05160 PF01039 Carboxyl transferase domain SRIM_RS05160 PF17848 Acetyl-coA carboxylase zinc finger domain SRIM_RS05165 PF04229 GrpB protein SRIM_RS05170 PF03466 LysR substrate binding domain SRIM_RS05170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS05175 PF00892 EamA-like transporter family SRIM_RS05180 PF13302 Acetyltransferase (GNAT) domain SRIM_RS05185 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS05185 PF00155 Aminotransferase class I and II SRIM_RS05200 PF00892 EamA-like transporter family SRIM_RS05215 PF03551 Transcriptional regulator PadR-like family SRIM_RS05225 PF00376 MerR family regulatory protein SRIM_RS05225 PF09278 MerR, DNA binding SRIM_RS05235 PF02567 Phenazine biosynthesis-like protein SRIM_RS05260 PF02347 Glycine cleavage system P-protein SRIM_RS05270 PF00817 impB/mucB/samB family SRIM_RS05270 PF11799 impB/mucB/samB family C-terminal domain SRIM_RS05275 PF13411 MerR HTH family regulatory protein SRIM_RS05280 PF02577 Bifunctional nuclease SRIM_RS05285 PF00376 MerR family regulatory protein SRIM_RS05290 PF00498 FHA domain SRIM_RS05295 PF05949 Bacterial protein of unknown function (DUF881) SRIM_RS05300 PF06947 Protein of unknown function (DUF1290) SRIM_RS05305 PF05949 Bacterial protein of unknown function (DUF881) SRIM_RS05310 PF00483 Nucleotidyl transferase SRIM_RS05315 PF01066 CDP-alcohol phosphatidyltransferase SRIM_RS05335 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SRIM_RS05335 PF00367 phosphotransferase system, EIIB SRIM_RS05340 PF02896 PEP-utilising enzyme, TIM barrel domain SRIM_RS05340 PF00391 PEP-utilising enzyme, mobile domain SRIM_RS05340 PF05524 PEP-utilising enzyme, N-terminal SRIM_RS05350 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS05350 PF00501 AMP-binding enzyme SRIM_RS05355 PF16338 Domain of unknown function (DUF4968) SRIM_RS05355 PF17137 Domain of unknown function (DUF5110) SRIM_RS05355 PF13802 Galactose mutarotase-like SRIM_RS05355 PF01055 Glycosyl hydrolases family 31 SRIM_RS05360 PF00891 O-methyltransferase domain SRIM_RS05365 PF01427 D-ala-D-ala dipeptidase SRIM_RS05375 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SRIM_RS05375 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SRIM_RS05380 PF05231 MASE1 SRIM_RS05380 PF00563 EAL domain SRIM_RS05380 PF08447 PAS fold SRIM_RS05380 PF08448 PAS fold SRIM_RS05380 PF13426 PAS domain SRIM_RS05380 PF00990 Diguanylate cyclase, GGDEF domain SRIM_RS05385 PF00230 Major intrinsic protein SRIM_RS05390 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SRIM_RS05390 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SRIM_RS05395 PF03129 Anticodon binding domain SRIM_RS05395 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SRIM_RS05420 PF14759 Reductase C-terminal SRIM_RS05420 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS05445 PF00355 Rieske [2Fe-2S] domain SRIM_RS05455 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS05455 PF00107 Zinc-binding dehydrogenase SRIM_RS05460 PF01266 FAD dependent oxidoreductase SRIM_RS05460 PF16350 FAD dependent oxidoreductase central domain SRIM_RS05460 PF01571 Aminomethyltransferase folate-binding domain SRIM_RS05460 PF08669 Glycine cleavage T-protein C-terminal barrel domain SRIM_RS05465 PF01266 FAD dependent oxidoreductase SRIM_RS05470 PF00355 Rieske [2Fe-2S] domain SRIM_RS05470 PF00848 Ring hydroxylating alpha subunit (catalytic domain) SRIM_RS05490 PF01470 Pyroglutamyl peptidase SRIM_RS05510 PF03746 LamB/YcsF family SRIM_RS05515 PF02682 Carboxyltransferase domain, subdomain C and D SRIM_RS05520 PF02626 Carboxyltransferase domain, subdomain A and B SRIM_RS05525 PF05378 Hydantoinase/oxoprolinase N-terminal region SRIM_RS05525 PF01968 Hydantoinase/oxoprolinase SRIM_RS05540 PF13593 SBF-like CPA transporter family (DUF4137) SRIM_RS05545 PF13579 Glycosyl transferase 4-like domain SRIM_RS05545 PF00534 Glycosyl transferases group 1 SRIM_RS05550 PF13439 Glycosyltransferase Family 4 SRIM_RS05550 PF00534 Glycosyl transferases group 1 SRIM_RS05590 PF01593 Flavin containing amine oxidoreductase SRIM_RS05600 PF00067 Cytochrome P450 SRIM_RS05635 PF00106 short chain dehydrogenase SRIM_RS05640 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS05675 PF00378 Enoyl-CoA hydratase/isomerase SRIM_RS05680 PF00501 AMP-binding enzyme SRIM_RS05680 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS05685 PF00067 Cytochrome P450 SRIM_RS05690 PF01817 Chorismate mutase type II SRIM_RS05705 PF04542 Sigma-70 region 2 SRIM_RS05705 PF08281 Sigma-70, region 4 SRIM_RS05705 PF12680 SnoaL-like domain SRIM_RS05720 PF14535 AMP-binding enzyme C-terminal domain SRIM_RS05720 PF00501 AMP-binding enzyme SRIM_RS05725 PF13302 Acetyltransferase (GNAT) domain SRIM_RS05735 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS05735 PF00501 AMP-binding enzyme SRIM_RS05740 PF01804 Penicillin amidase SRIM_RS05745 PF00501 AMP-binding enzyme SRIM_RS05745 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS05750 PF03060 Nitronate monooxygenase SRIM_RS05765 PF03793 PASTA domain SRIM_RS05765 PF00069 Protein kinase domain SRIM_RS05770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS05770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS05770 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS05800 PF00733 Asparagine synthase SRIM_RS05800 PF13537 Glutamine amidotransferase domain SRIM_RS05810 PF04978 Protein of unknown function (DUF664) SRIM_RS05825 PF07228 Stage II sporulation protein E (SpoIIE) SRIM_RS05825 PF13581 Histidine kinase-like ATPase domain SRIM_RS05825 PF13466 STAS domain SRIM_RS05825 PF08448 PAS fold SRIM_RS05835 PF06964 Alpha-L-arabinofuranosidase C-terminal domain SRIM_RS05835 PF02018 Carbohydrate binding domain SRIM_RS05840 PF13378 Enolase C-terminal domain-like SRIM_RS05840 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SRIM_RS05845 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS05845 PF00107 Zinc-binding dehydrogenase SRIM_RS05855 PF13407 Periplasmic binding protein domain SRIM_RS05860 PF00005 ABC transporter SRIM_RS05865 PF02653 Branched-chain amino acid transport system / permease component SRIM_RS05880 PF08450 SMP-30/Gluconolactonase/LRE-like region SRIM_RS05885 PF09339 IclR helix-turn-helix domain SRIM_RS05885 PF01614 Bacterial transcriptional regulator SRIM_RS05890 PF08659 KR domain SRIM_RS05890 PF00550 Phosphopantetheine attachment site SRIM_RS05890 PF00698 Acyl transferase domain SRIM_RS05890 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS05890 PF14765 Polyketide synthase dehydratase SRIM_RS05890 PF09277 Erythronolide synthase, docking SRIM_RS05890 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS05890 PF08990 Erythronolide synthase docking SRIM_RS05890 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS05890 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS05895 PF18665 Tetracyclin repressor-like, C-terminal domain SRIM_RS05895 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS05915 PF00561 alpha/beta hydrolase fold SRIM_RS05930 PF02350 UDP-N-acetylglucosamine 2-epimerase SRIM_RS05960 PF01042 Endoribonuclease L-PSP SRIM_RS05965 PF13280 WYL domain SRIM_RS05970 PF02733 Dak1 domain SRIM_RS05975 PF02734 DAK2 domain SRIM_RS05985 PF00361 Proton-conducting membrane transporter SRIM_RS05990 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SRIM_RS05995 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter SRIM_RS06015 PF01022 Bacterial regulatory protein, arsR family SRIM_RS06050 PF14013 MT0933-like antitoxin protein SRIM_RS06060 PF00171 Aldehyde dehydrogenase family SRIM_RS06065 PF07063 Domain of unknown function (DUF1338) SRIM_RS06070 PF01266 FAD dependent oxidoreductase SRIM_RS06070 PF16350 FAD dependent oxidoreductase central domain SRIM_RS06070 PF01571 Aminomethyltransferase folate-binding domain SRIM_RS06070 PF08669 Glycine cleavage T-protein C-terminal barrel domain SRIM_RS06110 PF13344 Haloacid dehalogenase-like hydrolase SRIM_RS06110 PF00293 NUDIX domain SRIM_RS06120 PF01177 Asp/Glu/Hydantoin racemase SRIM_RS06125 PF00535 Glycosyl transferase family 2 SRIM_RS06130 PF02342 TerD domain SRIM_RS06155 PF00571 CBS domain SRIM_RS06155 PF00478 IMP dehydrogenase / GMP reductase domain SRIM_RS06165 PF00004 ATPase family associated with various cellular activities (AAA) SRIM_RS06165 PF17866 AAA lid domain SRIM_RS06175 PF00455 DeoR C terminal sensor domain SRIM_RS06175 PF08220 DeoR-like helix-turn-helix domain SRIM_RS06180 PF00291 Pyridoxal-phosphate dependent enzyme SRIM_RS06200 PF16925 Tetracyclin repressor-like, C-terminal domain SRIM_RS06200 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS06225 PF00480 ROK family SRIM_RS06245 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS06245 PF00072 Response regulator receiver domain SRIM_RS06250 PF07730 Histidine kinase SRIM_RS06255 PF01494 FAD binding domain SRIM_RS06260 PF07687 Peptidase dimerisation domain SRIM_RS06260 PF01546 Peptidase family M20/M25/M40 SRIM_RS06265 PF00293 NUDIX domain SRIM_RS06275 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS06280 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS06290 PF16499 Alpha galactosidase A SRIM_RS06290 PF17801 Alpha galactosidase C-terminal beta sandwich domain SRIM_RS06295 PF13191 AAA ATPase domain SRIM_RS06295 PF00069 Protein kinase domain SRIM_RS06300 PF00480 ROK family SRIM_RS06305 PF00356 Bacterial regulatory proteins, lacI family SRIM_RS06325 PF13538 UvrD-like helicase C-terminal domain SRIM_RS06340 PF12894 Anaphase-promoting complex subunit 4 WD40 domain SRIM_RS06340 PF00400 WD domain, G-beta repeat SRIM_RS06345 PF04978 Protein of unknown function (DUF664) SRIM_RS06370 PF04545 Sigma-70, region 4 SRIM_RS06370 PF04539 Sigma-70 region 3 SRIM_RS06370 PF04542 Sigma-70 region 2 SRIM_RS06380 PF01012 Electron transfer flavoprotein domain SRIM_RS06380 PF00766 Electron transfer flavoprotein FAD-binding domain SRIM_RS06385 PF01012 Electron transfer flavoprotein domain SRIM_RS06410 PF01212 Beta-eliminating lyase SRIM_RS06425 PF03009 Glycerophosphoryl diester phosphodiesterase family SRIM_RS06450 PF01569 PAP2 superfamily SRIM_RS06455 PF13419 Haloacid dehalogenase-like hydrolase SRIM_RS06475 PF00004 ATPase family associated with various cellular activities (AAA) SRIM_RS06475 PF17866 AAA lid domain SRIM_RS06490 PF00571 CBS domain SRIM_RS06490 PF01595 Cyclin M transmembrane N-terminal domain SRIM_RS06495 PF01595 Cyclin M transmembrane N-terminal domain SRIM_RS06495 PF00571 CBS domain SRIM_RS06495 PF03471 Transporter associated domain SRIM_RS06505 PF01634 ATP phosphoribosyltransferase SRIM_RS06505 PF08029 HisG, C-terminal domain SRIM_RS06510 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SRIM_RS06515 PF00885 6,7-dimethyl-8-ribityllumazine synthase SRIM_RS06520 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SRIM_RS06520 PF00925 GTP cyclohydrolase II SRIM_RS06525 PF04973 Nicotinamide mononucleotide transporter SRIM_RS06530 PF00677 Lumazine binding domain SRIM_RS06535 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SRIM_RS06535 PF01872 RibD C-terminal domain SRIM_RS06540 PF05368 NmrA-like family SRIM_RS06545 PF00480 ROK family SRIM_RS06550 PF07690 Major Facilitator Superfamily SRIM_RS06560 PF00860 Permease family SRIM_RS06575 PF01593 Flavin containing amine oxidoreductase SRIM_RS06580 PF00795 Carbon-nitrogen hydrolase SRIM_RS06600 PF13520 Amino acid permease SRIM_RS06605 PF00478 IMP dehydrogenase / GMP reductase domain SRIM_RS06605 PF00571 CBS domain SRIM_RS06615 PF00571 CBS domain SRIM_RS06615 PF01595 Cyclin M transmembrane N-terminal domain SRIM_RS06620 PF00571 CBS domain SRIM_RS06620 PF01595 Cyclin M transmembrane N-terminal domain SRIM_RS06620 PF03471 Transporter associated domain SRIM_RS06635 PF00545 ribonuclease SRIM_RS06640 PF04198 Putative sugar-binding domain SRIM_RS06645 PF00834 Ribulose-phosphate 3 epimerase family SRIM_RS06650 PF01029 NusB family SRIM_RS06650 PF01189 16S rRNA methyltransferase RsmB/F SRIM_RS06655 PF00551 Formyl transferase SRIM_RS06655 PF02911 Formyl transferase, C-terminal domain SRIM_RS06665 PF17764 3′ DNA-binding domain (3′BD) SRIM_RS06690 PF02773 S-adenosylmethionine synthetase, C-terminal domain SRIM_RS06690 PF00438 S-adenosylmethionine synthetase, N-terminal domain SRIM_RS06690 PF02772 S-adenosylmethionine synthetase, central domain SRIM_RS06695 PF02441 Flavoprotein SRIM_RS06695 PF04127 DNA / pantothenate metabolism flavoprotein SRIM_RS06700 PF01192 RNA polymerase Rpb6 SRIM_RS06705 PF00625 Guanylate kinase SRIM_RS06715 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SRIM_RS06720 PF01180 Dihydroorotate dehydrogenase SRIM_RS06725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SRIM_RS06725 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SRIM_RS06725 PF02142 MGS-like domain SRIM_RS06730 PF00117 Glutamine amidotransferase class-I SRIM_RS06730 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SRIM_RS06740 PF01979 Amidohydrolase family SRIM_RS06745 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SRIM_RS06745 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SRIM_RS06750 PF00156 Phosphoribosyl transferase domain SRIM_RS06760 PF01029 NusB family SRIM_RS06765 PF08207 Elongation factor P (EF-P) KOW-like domain SRIM_RS06765 PF09285 Elongation factor P, C-terminal SRIM_RS06765 PF01132 Elongation factor P (EF-P) OB domain SRIM_RS06770 PF00557 Metallopeptidase family M24 SRIM_RS06770 PF01321 Creatinase/Prolidase N-terminal domain SRIM_RS06780 PF01220 Dehydroquinase class II SRIM_RS06785 PF01761 3-dehydroquinate synthase SRIM_RS06790 PF01202 Shikimate kinase SRIM_RS06795 PF01264 Chorismate synthase SRIM_RS06800 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SRIM_RS06800 PF01488 Shikimate / quinate 5-dehydrogenase SRIM_RS06800 PF08501 Shikimate dehydrogenase substrate binding domain SRIM_RS06810 PF03652 Holliday junction resolvase SRIM_RS06815 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SRIM_RS06815 PF02272 DHHA1 domain SRIM_RS06815 PF01411 tRNA synthetases class II (A) SRIM_RS06830 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS06835 PF01479 S4 domain SRIM_RS06835 PF00163 Ribosomal protein S4/S9 N-terminal domain SRIM_RS06845 PF00004 ATPase family associated with various cellular activities (AAA) SRIM_RS06845 PF16193 AAA C-terminal domain SRIM_RS06845 PF12002 MgsA AAA+ ATPase C terminal SRIM_RS06855 PF03129 Anticodon binding domain SRIM_RS06855 PF13393 Histidyl-tRNA synthetase SRIM_RS06860 PF00753 Metallo-beta-lactamase superfamily SRIM_RS06865 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SRIM_RS06870 PF03993 Domain of Unknown Function (DUF349) SRIM_RS06875 PF13291 ACT domain SRIM_RS06875 PF02824 TGS domain SRIM_RS06875 PF04607 Region found in RelA / SpoT proteins SRIM_RS06880 PF00156 Phosphoribosyl transferase domain SRIM_RS06885 PF02355 Protein export membrane protein SRIM_RS06885 PF07549 SecD/SecF GG Motif SRIM_RS06890 PF07549 SecD/SecF GG Motif SRIM_RS06890 PF02355 Protein export membrane protein SRIM_RS06895 PF02699 Preprotein translocase subunit SRIM_RS06900 PF17864 RuvB AAA lid domain SRIM_RS06900 PF05496 Holliday junction DNA helicase RuvB P-loop domain SRIM_RS06900 PF05491 RuvB C-terminal winged helix domain SRIM_RS06905 PF01330 RuvA N terminal domain SRIM_RS06905 PF07499 RuvA, C-terminal domain SRIM_RS06910 PF02075 Crossover junction endodeoxyribonuclease RuvC SRIM_RS06915 PF01709 Transcriptional regulator SRIM_RS06920 PF01174 SNO glutamine amidotransferase family SRIM_RS06925 PF01680 SOR/SNZ family SRIM_RS06940 PF13439 Glycosyltransferase Family 4 SRIM_RS06945 PF03279 Bacterial lipid A biosynthesis acyltransferase SRIM_RS06950 PF01066 CDP-alcohol phosphatidyltransferase SRIM_RS06955 PF14492 Elongation Factor G, domain II SRIM_RS06955 PF00679 Elongation factor G C-terminus SRIM_RS06955 PF03144 Elongation factor Tu domain 2 SRIM_RS06955 PF00009 Elongation factor Tu GTP binding domain SRIM_RS06955 PF03764 Elongation factor G, domain IV SRIM_RS06975 PF01230 HIT domain SRIM_RS06980 PF03129 Anticodon binding domain SRIM_RS06980 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SRIM_RS06980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SRIM_RS06995 PF00929 Exonuclease SRIM_RS07020 PF04686 Streptomyces sporulation and cell division protein, SsgA SRIM_RS07055 PF04715 Anthranilate synthase component I, N terminal region SRIM_RS07055 PF00425 chorismate binding enzyme SRIM_RS07105 PF00069 Protein kinase domain SRIM_RS07105 PF00400 WD domain, G-beta repeat SRIM_RS07115 PF00588 SpoU rRNA Methylase family SRIM_RS07120 PF14824 Sirohaem biosynthesis protein central SRIM_RS07120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SRIM_RS07120 PF10414 Sirohaem synthase dimerisation region SRIM_RS07125 PF02277 Phosphoribosyltransferase SRIM_RS07130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SRIM_RS07140 PF03180 NLPA lipoprotein SRIM_RS07145 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS07150 PF00005 ABC transporter SRIM_RS07150 PF09383 NIL domain SRIM_RS07155 PF13419 Haloacid dehalogenase-like hydrolase SRIM_RS07175 PF03009 Glycerophosphoryl diester phosphodiesterase family SRIM_RS07180 PF01553 Acyltransferase SRIM_RS07180 PF00501 AMP-binding enzyme SRIM_RS07185 PF00149 Calcineurin-like phosphoesterase SRIM_RS07185 PF02872 5'-nucleotidase, C-terminal domain SRIM_RS07190 PF07690 Major Facilitator Superfamily SRIM_RS07200 PF00206 Lyase SRIM_RS07200 PF14698 Argininosuccinate lyase C-terminal SRIM_RS07205 PF00764 Arginosuccinate synthase SRIM_RS07210 PF04343 Protein of unknown function, DUF488 SRIM_RS07260 PF01979 Amidohydrolase family SRIM_RS07265 PF01316 Arginine repressor, DNA binding domain SRIM_RS07265 PF02863 Arginine repressor, C-terminal domain SRIM_RS07270 PF00202 Aminotransferase class-III SRIM_RS07275 PF00696 Amino acid kinase family SRIM_RS07280 PF01960 ArgJ family SRIM_RS07285 PF01118 Semialdehyde dehydrogenase, NAD binding domain SRIM_RS07285 PF02774 Semialdehyde dehydrogenase, dimerisation domain SRIM_RS07320 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS07320 PF17754 MftR C-terminal domain SRIM_RS07325 PF01494 FAD binding domain SRIM_RS07330 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS07330 PF00072 Response regulator receiver domain SRIM_RS07335 PF07730 Histidine kinase SRIM_RS07350 PF03971 Monomeric isocitrate dehydrogenase SRIM_RS07355 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS07355 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS07380 PF12680 SnoaL-like domain SRIM_RS07380 PF08281 Sigma-70, region 4 SRIM_RS07380 PF04542 Sigma-70 region 2 SRIM_RS07395 PF00459 Inositol monophosphatase family SRIM_RS07415 PF01547 Bacterial extracellular solute-binding protein SRIM_RS07420 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS07425 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS07430 PF00294 pfkB family carbohydrate kinase SRIM_RS07435 PF02056 Family 4 glycosyl hydrolase SRIM_RS07435 PF11975 Family 4 glycosyl hydrolase C-terminal domain SRIM_RS07450 PF00892 EamA-like transporter family SRIM_RS07460 PF02638 Glycosyl hydrolase-like 10 SRIM_RS07465 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SRIM_RS07465 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SRIM_RS07490 PF03484 tRNA synthetase B5 domain SRIM_RS07490 PF03147 Ferredoxin-fold anticodon binding domain SRIM_RS07490 PF01588 Putative tRNA binding domain SRIM_RS07490 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SRIM_RS07490 PF03483 B3/4 domain SRIM_RS07495 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SRIM_RS07495 PF01409 tRNA synthetases class II core domain (F) SRIM_RS07500 PF18698 Histidine kinase sensor domain SRIM_RS07500 PF00672 HAMP domain SRIM_RS07500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS07500 PF00989 PAS fold SRIM_RS07500 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS07505 PF08032 RNA 2'-O ribose methyltransferase substrate binding SRIM_RS07505 PF00588 SpoU rRNA Methylase family SRIM_RS07510 PF00453 Ribosomal protein L20 SRIM_RS07515 PF01632 Ribosomal protein L35 SRIM_RS07520 PF00707 Translation initiation factor IF-3, C-terminal domain SRIM_RS07520 PF05198 Translation initiation factor IF-3, N-terminal domain SRIM_RS07530 PF00230 Major intrinsic protein SRIM_RS07540 PF00082 Subtilase family SRIM_RS07565 PF00171 Aldehyde dehydrogenase family SRIM_RS07570 PF03951 Glutamine synthetase, beta-Grasp domain SRIM_RS07570 PF00120 Glutamine synthetase, catalytic domain SRIM_RS07575 PF07729 FCD domain SRIM_RS07575 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS07580 PF13520 Amino acid permease SRIM_RS07585 PF07722 Peptidase C26 SRIM_RS07590 PF03466 LysR substrate binding domain SRIM_RS07590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS07605 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS07610 PF00005 ABC transporter SRIM_RS07610 PF00571 CBS domain SRIM_RS07615 PF01367 5'-3' exonuclease, C-terminal SAM fold SRIM_RS07615 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SRIM_RS07620 PF08021 Siderophore-interacting FAD-binding domain SRIM_RS07620 PF04954 Siderophore-interacting protein SRIM_RS07630 PF13847 Methyltransferase domain SRIM_RS07635 PF00270 DEAD/DEAH box helicase SRIM_RS07635 PF08148 DSHCT (NUC185) domain SRIM_RS07635 PF00271 Helicase conserved C-terminal domain SRIM_RS07640 PF00902 Sec-independent protein translocase protein (TatC) SRIM_RS07645 PF02416 mttA/Hcf106 family SRIM_RS07665 PF13280 WYL domain SRIM_RS07670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SRIM_RS07680 PF03136 Pup-ligase protein SRIM_RS07690 PF00356 Bacterial regulatory proteins, lacI family SRIM_RS07695 PF00227 Proteasome subunit SRIM_RS07700 PF00227 Proteasome subunit SRIM_RS07705 PF05639 Pup-like protein SRIM_RS07710 PF03136 Pup-ligase protein SRIM_RS07715 PF00004 ATPase family associated with various cellular activities (AAA) SRIM_RS07715 PF16450 Proteasomal ATPase OB C-terminal domain SRIM_RS07715 PF17758 Proteasomal ATPase OB N-terminal domain SRIM_RS07730 PF08704 tRNA methyltransferase complex GCD14 subunit SRIM_RS07735 PF00571 CBS domain SRIM_RS07735 PF02163 Peptidase family M50 SRIM_RS07745 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS07745 PF00072 Response regulator receiver domain SRIM_RS07755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SRIM_RS07760 PF13419 Haloacid dehalogenase-like hydrolase SRIM_RS07765 PF02310 B12 binding domain SRIM_RS07765 PF02607 B12 binding domain SRIM_RS07765 PF02965 Vitamin B12 dependent methionine synthase, activation domain SRIM_RS07765 PF00809 Pterin binding enzyme SRIM_RS07765 PF02574 Homocysteine S-methyltransferase SRIM_RS07770 PF01614 Bacterial transcriptional regulator SRIM_RS07770 PF09339 IclR helix-turn-helix domain SRIM_RS07775 PF00230 Major intrinsic protein SRIM_RS07780 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SRIM_RS07780 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SRIM_RS07785 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SRIM_RS07785 PF01266 FAD dependent oxidoreductase SRIM_RS07790 PF05199 GMC oxidoreductase SRIM_RS07790 PF00732 GMC oxidoreductase SRIM_RS07795 PF03079 ARD/ARD' family SRIM_RS07805 PF00596 Class II Aldolase and Adducin N-terminal domain SRIM_RS07810 PF01048 Phosphorylase superfamily SRIM_RS07815 PF01979 Amidohydrolase family SRIM_RS07820 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS07820 PF07729 FCD domain SRIM_RS07840 PF00248 Aldo/keto reductase family SRIM_RS07845 PF02653 Branched-chain amino acid transport system / permease component SRIM_RS07850 PF00005 ABC transporter SRIM_RS07865 PF13378 Enolase C-terminal domain-like SRIM_RS07865 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SRIM_RS07875 PF00144 Beta-lactamase SRIM_RS07890 PF01406 tRNA synthetases class I (C) catalytic domain SRIM_RS07910 PF01544 CorA-like Mg2+ transporter protein SRIM_RS07920 PF00296 Luciferase-like monooxygenase SRIM_RS07925 PF00248 Aldo/keto reductase family SRIM_RS07945 PF03777 ChpA-C SRIM_RS07950 PF03777 ChpA-C SRIM_RS07955 PF01546 Peptidase family M20/M25/M40 SRIM_RS07955 PF07687 Peptidase dimerisation domain SRIM_RS08010 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SRIM_RS08050 PF00005 ABC transporter SRIM_RS08055 PF00067 Cytochrome P450 SRIM_RS08080 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS08080 PF00072 Response regulator receiver domain SRIM_RS08085 PF18698 Histidine kinase sensor domain SRIM_RS08085 PF00672 HAMP domain SRIM_RS08085 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS08085 PF00989 PAS fold SRIM_RS08085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS08090 PF01636 Phosphotransferase enzyme family SRIM_RS08110 PF02728 Copper amine oxidase, N3 domain SRIM_RS08110 PF01179 Copper amine oxidase, enzyme domain SRIM_RS08125 PF00890 FAD binding domain SRIM_RS08150 PF00293 NUDIX domain SRIM_RS08155 PF02656 Domain of unknown function (DUF202) SRIM_RS08170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS08170 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS08170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS08175 PF01047 MarR family SRIM_RS08175 PF00583 Acetyltransferase (GNAT) family SRIM_RS08180 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS08180 PF08361 MAATS-type transcriptional repressor, C-terminal region SRIM_RS08185 PF00501 AMP-binding enzyme SRIM_RS08185 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS08190 PF00106 short chain dehydrogenase SRIM_RS08195 PF07075 Protein of unknown function (DUF1343) SRIM_RS08200 PF00083 Sugar (and other) transporter SRIM_RS08200 PF07690 Major Facilitator Superfamily SRIM_RS08220 PF01425 Amidase SRIM_RS08230 PF01575 MaoC like domain SRIM_RS08240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS08240 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS08240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS08275 PF00107 Zinc-binding dehydrogenase SRIM_RS08275 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS08280 PF00171 Aldehyde dehydrogenase family SRIM_RS08290 PF13847 Methyltransferase domain SRIM_RS08290 PF03551 Transcriptional regulator PadR-like family SRIM_RS08300 PF03600 Citrate transporter SRIM_RS08305 PF04209 homogentisate 1,2-dioxygenase SRIM_RS08310 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS08310 PF07702 UTRA domain SRIM_RS08315 PF05908 Poly-gamma-glutamate hydrolase SRIM_RS08320 PF00083 Sugar (and other) transporter SRIM_RS08330 PF02515 CoA-transferase family III SRIM_RS08340 PF10099 Anti-sigma-K factor rskA SRIM_RS08345 PF04545 Sigma-70, region 4 SRIM_RS08345 PF04542 Sigma-70 region 2 SRIM_RS08360 PF03824 High-affinity nickel-transport protein SRIM_RS08365 PF03793 PASTA domain SRIM_RS08365 PF00069 Protein kinase domain SRIM_RS08370 PF13472 GDSL-like Lipase/Acylhydrolase family SRIM_RS08385 PF00535 Glycosyl transferase family 2 SRIM_RS08390 PF00535 Glycosyl transferase family 2 SRIM_RS08395 PF01522 Polysaccharide deacetylase SRIM_RS08425 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS08455 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SRIM_RS08455 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SRIM_RS08460 PF06276 Ferric iron reductase FhuF-like transporter SRIM_RS08460 PF04183 IucA / IucC family SRIM_RS08475 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading SRIM_RS08475 PF18416 N-acetylglucosamine binding protein domain 2 SRIM_RS08485 PF11799 impB/mucB/samB family C-terminal domain SRIM_RS08485 PF00817 impB/mucB/samB family SRIM_RS08490 PF14579 Helix-hairpin-helix motif SRIM_RS08490 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SRIM_RS08490 PF07733 Bacterial DNA polymerase III alpha NTPase domain SRIM_RS08490 PF02811 PHP domain SRIM_RS08510 PF00183 Hsp90 protein SRIM_RS08510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS08515 PF10011 Predicted membrane protein (DUF2254) SRIM_RS08520 PF00720 Subtilisin inhibitor-like SRIM_RS08525 PF00156 Phosphoribosyl transferase domain SRIM_RS08525 PF05139 Erythromycin esterase SRIM_RS08530 PF02983 Alpha-lytic protease prodomain SRIM_RS08530 PF00089 Trypsin SRIM_RS08540 PF00089 Trypsin SRIM_RS08540 PF02983 Alpha-lytic protease prodomain SRIM_RS08550 PF00296 Luciferase-like monooxygenase SRIM_RS08555 PF00296 Luciferase-like monooxygenase SRIM_RS08565 PF04472 Cell division protein SepF SRIM_RS08570 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS08570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS08570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS08575 PF07690 Major Facilitator Superfamily SRIM_RS08585 PF01569 PAP2 superfamily SRIM_RS08600 PF00741 Gas vesicle protein SRIM_RS08620 PF03364 Polyketide cyclase / dehydrase and lipid transport SRIM_RS08625 PF00741 Gas vesicle protein SRIM_RS08635 PF00741 Gas vesicle protein SRIM_RS08640 PF05121 Gas vesicle protein K SRIM_RS08640 PF00741 Gas vesicle protein SRIM_RS08645 PF00115 Cytochrome C and Quinol oxidase polypeptide I SRIM_RS08680 PF00005 ABC transporter SRIM_RS08680 PF12399 Branched-chain amino acid ATP-binding cassette transporter SRIM_RS08685 PF00005 ABC transporter SRIM_RS08690 PF03990 G5-linked-Ubiquitin-like domain SRIM_RS08690 PF07501 G5 domain SRIM_RS08690 PF06737 Transglycosylase-like domain SRIM_RS08695 PF06737 Transglycosylase-like domain SRIM_RS08710 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SRIM_RS08710 PF01926 50S ribosome-binding GTPase SRIM_RS08720 PF02224 Cytidylate kinase SRIM_RS08725 PF02153 Prephenate dehydrogenase SRIM_RS08745 PF10127 RNA repair pathway DNA polymerase beta family SRIM_RS08755 PF00849 RNA pseudouridylate synthase SRIM_RS08755 PF01479 S4 domain SRIM_RS08760 PF04079 Segregation and condensation complex subunit ScpB SRIM_RS08765 PF02616 Segregation and condensation protein ScpA SRIM_RS08775 PF13614 AAA domain SRIM_RS08780 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SRIM_RS08780 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SRIM_RS08790 PF00293 NUDIX domain SRIM_RS08795 PF00117 Glutamine amidotransferase class-I SRIM_RS08795 PF06418 CTP synthase N-terminus SRIM_RS08800 PF00723 Glycosyl hydrolases family 15 SRIM_RS08805 PF00652 Ricin-type beta-trefoil lectin domain SRIM_RS08805 PF16483 Beta-1,3-glucanase SRIM_RS08815 PF00356 Bacterial regulatory proteins, lacI family SRIM_RS08830 PF13579 Glycosyl transferase 4-like domain SRIM_RS08830 PF00534 Glycosyl transferases group 1 SRIM_RS08840 PF02463 RecF/RecN/SMC N terminal domain SRIM_RS08860 PF01513 ATP-NAD kinase SRIM_RS08865 PF01479 S4 domain SRIM_RS08865 PF01728 FtsJ-like methyltransferase SRIM_RS08880 PF00005 ABC transporter SRIM_RS08885 PF01032 FecCD transport family SRIM_RS08890 PF01032 FecCD transport family SRIM_RS08905 PF18407 GCN5-related N-acetyltransferase like domain SRIM_RS08905 PF13344 Haloacid dehalogenase-like hydrolase SRIM_RS08915 PF00282 Pyridoxal-dependent decarboxylase conserved domain SRIM_RS08920 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) SRIM_RS08930 PF06276 Ferric iron reductase FhuF-like transporter SRIM_RS08930 PF04183 IucA / IucC family SRIM_RS08960 PF02245 Methylpurine-DNA glycosylase (MPG) SRIM_RS08970 PF01161 Phosphatidylethanolamine-binding protein SRIM_RS08985 PF01145 SPFH domain / Band 7 family SRIM_RS08995 PF00005 ABC transporter SRIM_RS09010 PF03777 ChpA-C SRIM_RS09015 PF00072 Response regulator receiver domain SRIM_RS09015 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS09020 PF13492 GAF domain SRIM_RS09020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS09020 PF07730 Histidine kinase SRIM_RS09030 PF02547 Queuosine biosynthesis protein SRIM_RS09035 PF01996 F420-0:Gamma-glutamyl ligase SRIM_RS09035 PF00881 Nitroreductase family SRIM_RS09045 PF00498 FHA domain SRIM_RS09045 PF00005 ABC transporter SRIM_RS09045 PF01061 ABC-2 type transporter SRIM_RS09060 PF00300 Histidine phosphatase superfamily (branch 1) SRIM_RS09070 PF07690 Major Facilitator Superfamily SRIM_RS09075 PF07729 FCD domain SRIM_RS09075 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS09100 PF01479 S4 domain SRIM_RS09100 PF00579 tRNA synthetases class I (W and Y) SRIM_RS09105 PF04226 Transglycosylase associated protein SRIM_RS09120 PF04055 Radical SAM superfamily SRIM_RS09120 PF06463 Molybdenum Cofactor Synthesis C SRIM_RS09125 PF00474 Sodium:solute symporter family SRIM_RS09140 PF00082 Subtilase family SRIM_RS09145 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain SRIM_RS09150 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS09160 PF04116 Fatty acid hydroxylase superfamily SRIM_RS09165 PF00533 BRCA1 C Terminus (BRCT) domain SRIM_RS09165 PF01653 NAD-dependent DNA ligase adenylation domain SRIM_RS09165 PF03120 NAD-dependent DNA ligase OB-fold domain SRIM_RS09165 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SRIM_RS09165 PF12826 Helix-hairpin-helix motif SRIM_RS09180 PF00723 Glycosyl hydrolases family 15 SRIM_RS09210 PF03780 Asp23 family, cell envelope-related function SRIM_RS09220 PF00378 Enoyl-CoA hydratase/isomerase SRIM_RS09230 PF00005 ABC transporter SRIM_RS09230 PF16326 ABC transporter C-terminal domain SRIM_RS09230 PF12848 ABC transporter SRIM_RS09235 PF04228 Putative neutral zinc metallopeptidase SRIM_RS09255 PF00596 Class II Aldolase and Adducin N-terminal domain SRIM_RS09260 PF01183 Glycosyl hydrolases family 25 SRIM_RS09265 PF01384 Phosphate transporter family SRIM_RS09275 PF03186 CobD/Cbib protein SRIM_RS09285 PF13519 von Willebrand factor type A domain SRIM_RS09285 PF17863 AAA lid domain SRIM_RS09285 PF07728 AAA domain (dynein-related subfamily) SRIM_RS09290 PF12557 Cob(I)alamin adenosyltransferase N terminal SRIM_RS09290 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP SRIM_RS09295 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SRIM_RS09295 PF07685 CobB/CobQ-like glutamine amidotransferase domain SRIM_RS09315 PF00155 Aminotransferase class I and II SRIM_RS09320 PF01758 Sodium Bile acid symporter family SRIM_RS09325 PF01979 Amidohydrolase family SRIM_RS09330 PF00583 Acetyltransferase (GNAT) family SRIM_RS09335 PF00202 Aminotransferase class-III SRIM_RS09340 PF06339 Ectoine synthase SRIM_RS09345 PF05721 Phytanoyl-CoA dioxygenase (PhyH) SRIM_RS09360 PF00561 alpha/beta hydrolase fold SRIM_RS09380 PF00583 Acetyltransferase (GNAT) family SRIM_RS09385 PF00171 Aldehyde dehydrogenase family SRIM_RS09390 PF01614 Bacterial transcriptional regulator SRIM_RS09390 PF09339 IclR helix-turn-helix domain SRIM_RS09395 PF07730 Histidine kinase SRIM_RS09400 PF00072 Response regulator receiver domain SRIM_RS09400 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS09425 PF00701 Dihydrodipicolinate synthetase family SRIM_RS09430 PF01370 NAD dependent epimerase/dehydratase family SRIM_RS09435 PF04226 Transglycosylase associated protein SRIM_RS09440 PF02342 TerD domain SRIM_RS09445 PF00561 alpha/beta hydrolase fold SRIM_RS09470 PF00296 Luciferase-like monooxygenase SRIM_RS09500 PF00701 Dihydrodipicolinate synthetase family SRIM_RS09520 PF14602 Hexapeptide repeat of succinyl-transferase SRIM_RS09520 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle SRIM_RS09530 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS09535 PF00893 Small Multidrug Resistance protein SRIM_RS09555 PF01883 Iron-sulfur cluster assembly protein SRIM_RS09560 PF01592 NifU-like N terminal domain SRIM_RS09565 PF00266 Aminotransferase class-V SRIM_RS09570 PF00005 ABC transporter SRIM_RS09580 PF01458 Uncharacterized protein family (UPF0051) SRIM_RS09585 PF01458 Uncharacterized protein family (UPF0051) SRIM_RS09595 PF13732 Domain of unknown function (DUF4162) SRIM_RS09595 PF00005 ABC transporter SRIM_RS09605 PF02628 Cytochrome oxidase assembly protein SRIM_RS09620 PF01040 UbiA prenyltransferase family SRIM_RS09625 PF00456 Transketolase, thiamine diphosphate binding domain SRIM_RS09625 PF02779 Transketolase, pyrimidine binding domain SRIM_RS09625 PF02780 Transketolase, C-terminal domain SRIM_RS09630 PF00923 Transaldolase/Fructose-6-phosphate aldolase SRIM_RS09635 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SRIM_RS09635 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SRIM_RS09645 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SRIM_RS09655 PF00342 Phosphoglucose isomerase SRIM_RS09665 PF03840 Preprotein translocase SecG subunit SRIM_RS09675 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SRIM_RS09675 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SRIM_RS09680 PF00246 Zinc carboxypeptidase SRIM_RS09685 PF00583 Acetyltransferase (GNAT) family SRIM_RS09690 PF02650 WhiA C-terminal HTH domain SRIM_RS09690 PF10298 WhiA N-terminal LAGLIDADG-like domain SRIM_RS09690 PF14527 WhiA LAGLIDADG-like domain SRIM_RS09695 PF01933 Uncharacterised protein family UPF0052 SRIM_RS09700 PF03668 P-loop ATPase protein family SRIM_RS09705 PF02151 UvrB/uvrC motif SRIM_RS09705 PF08459 UvrC Helix-hairpin-helix N-terminal SRIM_RS09705 PF01541 GIY-YIG catalytic domain SRIM_RS09725 PF01910 Thiamine-binding protein SRIM_RS09745 PF00083 Sugar (and other) transporter SRIM_RS09750 PF16912 Glucose dehydrogenase C-terminus SRIM_RS09750 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS09755 PF00356 Bacterial regulatory proteins, lacI family SRIM_RS09765 PF00005 ABC transporter SRIM_RS09765 PF17755 UvrA DNA-binding domain SRIM_RS09765 PF17760 UvrA interaction domain SRIM_RS09775 PF01494 FAD binding domain SRIM_RS09795 PF03741 Integral membrane protein TerC family SRIM_RS09805 PF02342 TerD domain SRIM_RS09810 PF00271 Helicase conserved C-terminal domain SRIM_RS09810 PF04851 Type III restriction enzyme, res subunit SRIM_RS09810 PF02151 UvrB/uvrC motif SRIM_RS09810 PF12344 Ultra-violet resistance protein B SRIM_RS09810 PF17757 UvrB interaction domain SRIM_RS09815 PF03009 Glycerophosphoryl diester phosphodiesterase family SRIM_RS09820 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SRIM_RS09820 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SRIM_RS09860 PF04434 SWIM zinc finger SRIM_RS09865 PF12419 SNF2 Helicase protein SRIM_RS09865 PF00271 Helicase conserved C-terminal domain SRIM_RS09865 PF00176 SNF2 family N-terminal domain SRIM_RS09890 PF01121 Dephospho-CoA kinase SRIM_RS09910 PF00575 S1 RNA binding domain SRIM_RS09915 PF01209 ubiE/COQ5 methyltransferase family SRIM_RS09920 PF00270 DEAD/DEAH box helicase SRIM_RS09920 PF04408 Helicase associated domain (HA2) SRIM_RS09920 PF00271 Helicase conserved C-terminal domain SRIM_RS09920 PF08482 ATP-dependent helicase C-terminal SRIM_RS09945 PF01367 5'-3' exonuclease, C-terminal SAM fold SRIM_RS09945 PF00476 DNA polymerase family A SRIM_RS09945 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SRIM_RS09950 PF01568 Molydopterin dinucleotide binding domain SRIM_RS09950 PF00384 Molybdopterin oxidoreductase SRIM_RS09955 PF03061 Thioesterase superfamily SRIM_RS09960 PF13458 Periplasmic binding protein SRIM_RS09965 PF02653 Branched-chain amino acid transport system / permease component SRIM_RS09970 PF02653 Branched-chain amino acid transport system / permease component SRIM_RS09970 PF11862 Domain of unknown function (DUF3382) SRIM_RS09975 PF00005 ABC transporter SRIM_RS09975 PF12399 Branched-chain amino acid ATP-binding cassette transporter SRIM_RS09980 PF00005 ABC transporter SRIM_RS09985 PF00072 Response regulator receiver domain SRIM_RS09985 PF03861 ANTAR domain SRIM_RS10000 PF00224 Pyruvate kinase, barrel domain SRIM_RS10000 PF02887 Pyruvate kinase, alpha/beta domain SRIM_RS10010 PF02872 5'-nucleotidase, C-terminal domain SRIM_RS10010 PF00149 Calcineurin-like phosphoesterase SRIM_RS10015 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) SRIM_RS10020 PF00282 Pyridoxal-dependent decarboxylase conserved domain SRIM_RS10025 PF11838 ERAP1-like C-terminal domain SRIM_RS10025 PF01433 Peptidase family M1 domain SRIM_RS10040 PF17974 Galactose-binding domain-like SRIM_RS10040 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase SRIM_RS10040 PF18080 Galactose mutarotase-like fold domain SRIM_RS10040 PF08305 NPCBM/NEW2 domain SRIM_RS10040 PF17451 Glycosyl hydrolase 101 beta sandwich domain SRIM_RS10040 PF12905 Endo-alpha-N-acetylgalactosaminidase SRIM_RS10050 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS10050 PF00072 Response regulator receiver domain SRIM_RS10055 PF00089 Trypsin SRIM_RS10070 PF17866 AAA lid domain SRIM_RS10070 PF00004 ATPase family associated with various cellular activities (AAA) SRIM_RS10090 PF12538 DNA transporter SRIM_RS10090 PF01580 FtsK/SpoIIIE family SRIM_RS10100 PF04542 Sigma-70 region 2 SRIM_RS10100 PF04545 Sigma-70, region 4 SRIM_RS10105 PF00561 alpha/beta hydrolase fold SRIM_RS10110 PF00753 Metallo-beta-lactamase superfamily SRIM_RS10110 PF16123 Hydroxyacylglutathione hydrolase C-terminus SRIM_RS10125 PF01243 Pyridoxamine 5'-phosphate oxidase SRIM_RS10135 PF01047 MarR family SRIM_RS10140 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SRIM_RS10140 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS10145 PF00310 Glutamine amidotransferases class-II SRIM_RS10145 PF01493 GXGXG motif SRIM_RS10145 PF01645 Conserved region in glutamate synthase SRIM_RS10145 PF04898 Glutamate synthase central domain SRIM_RS10155 PF00356 Bacterial regulatory proteins, lacI family SRIM_RS10160 PF03747 ADP-ribosylglycohydrolase SRIM_RS10180 PF02515 CoA-transferase family III SRIM_RS10185 PF03328 HpcH/HpaI aldolase/citrate lyase family SRIM_RS10190 PF01790 Prolipoprotein diacylglyceryl transferase SRIM_RS10200 PF00290 Tryptophan synthase alpha chain SRIM_RS10205 PF00291 Pyridoxal-phosphate dependent enzyme SRIM_RS10215 PF00218 Indole-3-glycerol phosphate synthase SRIM_RS10235 PF04715 Anthranilate synthase component I, N terminal region SRIM_RS10235 PF00425 chorismate binding enzyme SRIM_RS10240 PF01502 Phosphoribosyl-AMP cyclohydrolase SRIM_RS10250 PF00206 Lyase SRIM_RS10250 PF02655 ATP-grasp domain SRIM_RS10260 PF01168 Alanine racemase, N-terminal domain SRIM_RS10265 PF00291 Pyridoxal-phosphate dependent enzyme SRIM_RS10270 PF00156 Phosphoribosyl transferase domain SRIM_RS10275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS10275 PF03466 LysR substrate binding domain SRIM_RS10285 PF00890 FAD binding domain SRIM_RS10285 PF02910 Fumarate reductase flavoprotein C-term SRIM_RS10290 PF13085 2Fe-2S iron-sulfur cluster binding domain SRIM_RS10305 PF00977 Histidine biosynthesis protein SRIM_RS10310 PF01042 Endoribonuclease L-PSP SRIM_RS10315 PF00977 Histidine biosynthesis protein SRIM_RS10320 PF00117 Glutamine amidotransferase class-I SRIM_RS10330 PF00475 Imidazoleglycerol-phosphate dehydratase SRIM_RS10335 PF00155 Aminotransferase class I and II SRIM_RS10340 PF00815 Histidinol dehydrogenase SRIM_RS10355 PF04073 Aminoacyl-tRNA editing domain SRIM_RS10370 PF00005 ABC transporter SRIM_RS10370 PF13732 Domain of unknown function (DUF4162) SRIM_RS10375 PF01936 NYN domain SRIM_RS10385 PF14579 Helix-hairpin-helix motif SRIM_RS10385 PF02811 PHP domain SRIM_RS10385 PF07733 Bacterial DNA polymerase III alpha NTPase domain SRIM_RS10385 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SRIM_RS10415 PF09423 PhoD-like phosphatase SRIM_RS10415 PF16655 PhoD-like phosphatase, N-terminal domain SRIM_RS10430 PF00999 Sodium/hydrogen exchanger family SRIM_RS10435 PF00849 RNA pseudouridylate synthase SRIM_RS10440 PF01252 Signal peptidase (SPase) II SRIM_RS10445 PF01258 Prokaryotic dksA/traR C4-type zinc finger SRIM_RS10450 PF00133 tRNA synthetases class I (I, L, M and V) SRIM_RS10450 PF08264 Anticodon-binding domain of tRNA SRIM_RS10455 PF05103 DivIVA protein SRIM_RS10465 PF04472 Cell division protein SepF SRIM_RS10470 PF01168 Alanine racemase, N-terminal domain SRIM_RS10475 PF02578 Multi-copper polyphenol oxidoreductase laccase SRIM_RS10480 PF00091 Tubulin/FtsZ family, GTPase domain SRIM_RS10480 PF12327 FtsZ family, C-terminal domain SRIM_RS10485 PF08478 POTRA domain, FtsQ-type SRIM_RS10490 PF04101 Glycosyltransferase family 28 C-terminal domain SRIM_RS10490 PF03033 Glycosyltransferase family 28 N-terminal domain SRIM_RS10495 PF01098 Cell cycle protein SRIM_RS10500 PF02875 Mur ligase family, glutamate ligase domain SRIM_RS10500 PF08245 Mur ligase middle domain SRIM_RS10505 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SRIM_RS10505 PF00953 Glycosyl transferase family 4 SRIM_RS10510 PF01225 Mur ligase family, catalytic domain SRIM_RS10510 PF08245 Mur ligase middle domain SRIM_RS10510 PF02875 Mur ligase family, glutamate ligase domain SRIM_RS10515 PF08245 Mur ligase middle domain SRIM_RS10515 PF02875 Mur ligase family, glutamate ligase domain SRIM_RS10515 PF01225 Mur ligase family, catalytic domain SRIM_RS10520 PF00905 Penicillin binding protein transpeptidase domain SRIM_RS10520 PF03717 Penicillin-binding Protein dimerisation domain SRIM_RS10530 PF01795 MraW methylase family SRIM_RS10535 PF00484 Carbonic anhydrase SRIM_RS10540 PF07726 ATPase family associated with various cellular activities (AAA) SRIM_RS10540 PF17863 AAA lid domain SRIM_RS10570 PF00664 ABC transporter transmembrane region SRIM_RS10570 PF00005 ABC transporter SRIM_RS10580 PF08359 YsiA-like protein, C-terminal region SRIM_RS10580 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS10590 PF01593 Flavin containing amine oxidoreductase SRIM_RS10600 PF02219 Methylenetetrahydrofolate reductase SRIM_RS10605 PF02581 Thiamine monophosphate synthase SRIM_RS10615 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS10615 PF14759 Reductase C-terminal SRIM_RS10620 PF01266 FAD dependent oxidoreductase SRIM_RS10620 PF05690 Thiazole biosynthesis protein ThiG SRIM_RS10630 PF05690 Thiazole biosynthesis protein ThiG SRIM_RS10635 PF03793 PASTA domain SRIM_RS10635 PF00069 Protein kinase domain SRIM_RS10640 PF01261 Xylose isomerase-like TIM barrel SRIM_RS10650 PF00174 Oxidoreductase molybdopterin binding domain SRIM_RS10655 PF00210 Ferritin-like domain SRIM_RS10665 PF01474 Class-II DAHP synthetase family SRIM_RS10670 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS10675 PF12697 Alpha/beta hydrolase family SRIM_RS10680 PF00117 Glutamine amidotransferase class-I SRIM_RS10680 PF00425 chorismate binding enzyme SRIM_RS10685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SRIM_RS10685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SRIM_RS10690 PF00365 Phosphofructokinase SRIM_RS10695 PF00072 Response regulator receiver domain SRIM_RS10695 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS10710 PF12146 Serine aminopeptidase, S33 SRIM_RS10730 PF00480 ROK family SRIM_RS10735 PF17230 Family of unknown function (DUF5304) SRIM_RS10740 PF02374 Anion-transporting ATPase SRIM_RS10740 PF17886 HSP20-like domain found in ArsA SRIM_RS10755 PF00501 AMP-binding enzyme SRIM_RS10760 PF00534 Glycosyl transferases group 1 SRIM_RS10760 PF13439 Glycosyltransferase Family 4 SRIM_RS10775 PF00877 NlpC/P60 family SRIM_RS10780 PF00877 NlpC/P60 family SRIM_RS10795 PF01694 Rhomboid family SRIM_RS10805 PF00266 Aminotransferase class-V SRIM_RS10810 PF02885 Glycosyl transferase family, helical bundle domain SRIM_RS10810 PF00591 Glycosyl transferase family, a/b domain SRIM_RS10815 PF13631 Cytochrome b(N-terminal)/b6/petB SRIM_RS10820 PF00355 Rieske [2Fe-2S] domain SRIM_RS10825 PF00034 Cytochrome c SRIM_RS10825 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SRIM_RS10830 PF00510 Cytochrome c oxidase subunit III SRIM_RS10840 PF03734 L,D-transpeptidase catalytic domain SRIM_RS10840 PF17964 Bacterial Ig domain SRIM_RS10845 PF12270 Cytochrome c oxidase subunit IV SRIM_RS10850 PF00115 Cytochrome C and Quinol oxidase polypeptide I SRIM_RS10855 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SRIM_RS10860 PF00266 Aminotransferase class-V SRIM_RS10865 PF00294 pfkB family carbohydrate kinase SRIM_RS10880 PF01521 Iron-sulphur cluster biosynthesis SRIM_RS10885 PF02445 Quinolinate synthetase A protein SRIM_RS10890 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SRIM_RS10900 PF00873 AcrB/AcrD/AcrF family SRIM_RS10905 PF00072 Response regulator receiver domain SRIM_RS10905 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS10910 PF07730 Histidine kinase SRIM_RS10925 PF11241 Protein of unknown function (DUF3043) SRIM_RS10930 PF13649 Methyltransferase domain SRIM_RS10935 PF00664 ABC transporter transmembrane region SRIM_RS10935 PF00005 ABC transporter SRIM_RS10940 PF13180 PDZ domain SRIM_RS10960 PF02277 Phosphoribosyltransferase SRIM_RS10965 PF09924 Uncharacterised conserved protein (DUF2156) SRIM_RS10965 PF00152 tRNA synthetases class II (D, K and N) SRIM_RS10965 PF01336 OB-fold nucleic acid binding domain SRIM_RS10965 PF16995 Transmembrane region of lysyl-tRNA synthetase SRIM_RS10980 PF02654 Cobalamin-5-phosphate synthase SRIM_RS11005 PF13439 Glycosyltransferase Family 4 SRIM_RS11005 PF00534 Glycosyl transferases group 1 SRIM_RS11015 PF00883 Cytosol aminopeptidase family, catalytic domain SRIM_RS11015 PF02789 Cytosol aminopeptidase family, N-terminal domain SRIM_RS11020 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS11020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SRIM_RS11025 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SRIM_RS11025 PF00364 Biotin-requiring enzyme SRIM_RS11025 PF02817 e3 binding domain SRIM_RS11030 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS11030 PF07729 FCD domain SRIM_RS11035 PF17831 Pyruvate dehydrogenase E1 component middle domain SRIM_RS11035 PF00456 Transketolase, thiamine diphosphate binding domain SRIM_RS11060 PF08338 Domain of unknown function (DUF1731) SRIM_RS11060 PF01370 NAD dependent epimerase/dehydratase family SRIM_RS11065 PF01593 Flavin containing amine oxidoreductase SRIM_RS11080 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family SRIM_RS11080 PF04055 Radical SAM superfamily SRIM_RS11100 PF00120 Glutamine synthetase, catalytic domain SRIM_RS11100 PF03951 Glutamine synthetase, beta-Grasp domain SRIM_RS11125 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS11125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS11125 PF00672 HAMP domain SRIM_RS11130 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS11130 PF00072 Response regulator receiver domain SRIM_RS11135 PF00501 AMP-binding enzyme SRIM_RS11135 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS11140 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SRIM_RS11140 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SRIM_RS11150 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SRIM_RS11150 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SRIM_RS11155 PF00089 Trypsin SRIM_RS11170 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS11185 PF07730 Histidine kinase SRIM_RS11185 PF13492 GAF domain SRIM_RS11185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS11190 PF00072 Response regulator receiver domain SRIM_RS11190 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS11210 PF00111 2Fe-2S iron-sulfur cluster binding domain SRIM_RS11215 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS11230 PF17967 Pullulanase N2 domain SRIM_RS11230 PF18494 Pullulanase Ins domain SRIM_RS11230 PF03714 Bacterial pullanase-associated domain SRIM_RS11230 PF11852 Domain of unknown function (DUF3372) SRIM_RS11230 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SRIM_RS11235 PF00128 Alpha amylase, catalytic domain SRIM_RS11235 PF02806 Alpha amylase, C-terminal all-beta domain SRIM_RS11235 PF00686 Starch binding domain SRIM_RS11240 PF00067 Cytochrome P450 SRIM_RS11270 PF08003 Protein of unknown function (DUF1698) SRIM_RS11290 PF00356 Bacterial regulatory proteins, lacI family SRIM_RS11295 PF00128 Alpha amylase, catalytic domain SRIM_RS11300 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS11305 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS11310 PF13416 Bacterial extracellular solute-binding protein SRIM_RS11315 PF00128 Alpha amylase, catalytic domain SRIM_RS11320 PF00356 Bacterial regulatory proteins, lacI family SRIM_RS11330 PF03710 Glutamate-ammonia ligase adenylyltransferase SRIM_RS11330 PF08335 GlnD PII-uridylyltransferase SRIM_RS11335 PF03951 Glutamine synthetase, beta-Grasp domain SRIM_RS11335 PF00120 Glutamine synthetase, catalytic domain SRIM_RS11360 PF00394 Multicopper oxidase SRIM_RS11360 PF07731 Multicopper oxidase SRIM_RS11360 PF07732 Multicopper oxidase SRIM_RS11365 PF02540 NAD synthase SRIM_RS11365 PF00795 Carbon-nitrogen hydrolase SRIM_RS11375 PF07690 Major Facilitator Superfamily SRIM_RS11385 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS11385 PF16859 Tetracyclin repressor-like, C-terminal domain SRIM_RS11390 PF07690 Major Facilitator Superfamily SRIM_RS11395 PF02548 Ketopantoate hydroxymethyltransferase SRIM_RS11400 PF05437 Branched-chain amino acid transport protein (AzlD) SRIM_RS11410 PF01037 Lrp/AsnC ligand binding domain SRIM_RS11415 PF13732 Domain of unknown function (DUF4162) SRIM_RS11415 PF00005 ABC transporter SRIM_RS11425 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS11460 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS11465 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS11475 PF00754 F5/8 type C domain SRIM_RS11475 PF13088 BNR repeat-like domain SRIM_RS11475 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase SRIM_RS11490 PF00557 Metallopeptidase family M24 SRIM_RS11495 PF01126 Heme oxygenase SRIM_RS11500 PF02567 Phenazine biosynthesis-like protein SRIM_RS11515 PF01497 Periplasmic binding protein SRIM_RS11520 PF01032 FecCD transport family SRIM_RS11525 PF00005 ABC transporter SRIM_RS11530 PF09375 Imelysin SRIM_RS11530 PF13473 Cupredoxin-like domain SRIM_RS11535 PF10518 TAT (twin-arginine translocation) pathway signal sequence SRIM_RS11535 PF04261 Dyp-type peroxidase family SRIM_RS11540 PF03239 Iron permease FTR1 family SRIM_RS11555 PF16859 Tetracyclin repressor-like, C-terminal domain SRIM_RS11555 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS11575 PF00144 Beta-lactamase SRIM_RS11580 PF07690 Major Facilitator Superfamily SRIM_RS11585 PF09423 PhoD-like phosphatase SRIM_RS11585 PF16655 PhoD-like phosphatase, N-terminal domain SRIM_RS11595 PF00106 short chain dehydrogenase SRIM_RS11605 PF08241 Methyltransferase domain SRIM_RS11610 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase SRIM_RS11615 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SRIM_RS11640 PF13186 Iron-sulfur cluster-binding domain SRIM_RS11640 PF04055 Radical SAM superfamily SRIM_RS11750 PF02467 Transcription factor WhiB SRIM_RS11765 PF02467 Transcription factor WhiB SRIM_RS11785 PF00216 Bacterial DNA-binding protein SRIM_RS12140 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS12140 PF03704 Bacterial transcriptional activator domain SRIM_RS12140 PF00931 NB-ARC domain SRIM_RS12145 PF01156 Inosine-uridine preferring nucleoside hydrolase SRIM_RS12155 PF13411 MerR HTH family regulatory protein SRIM_RS12165 PF00575 S1 RNA binding domain SRIM_RS12165 PF00773 RNB domain SRIM_RS12165 PF17876 Cold shock domain SRIM_RS12170 PF03883 Peroxide stress protein YaaA SRIM_RS12175 PF01081 KDPG and KHG aldolase SRIM_RS12180 PF14864 Alkyl sulfatase C-terminal SRIM_RS12180 PF14863 Alkyl sulfatase dimerisation SRIM_RS12180 PF00753 Metallo-beta-lactamase superfamily SRIM_RS12185 PF00300 Histidine phosphatase superfamily (branch 1) SRIM_RS12185 PF13456 Reverse transcriptase-like SRIM_RS12195 PF01784 NIF3 (NGG1p interacting factor 3) SRIM_RS12220 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS12220 PF00107 Zinc-binding dehydrogenase SRIM_RS12225 PF01575 MaoC like domain SRIM_RS12230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS12230 PF07730 Histidine kinase SRIM_RS12270 PF00072 Response regulator receiver domain SRIM_RS12270 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS12275 PF01597 Glycine cleavage H-protein SRIM_RS12285 PF07690 Major Facilitator Superfamily SRIM_RS12290 PF00108 Thiolase, N-terminal domain SRIM_RS12290 PF02803 Thiolase, C-terminal domain SRIM_RS12295 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS12295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS12295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS12300 PF17843 MycE methyltransferase N-terminal SRIM_RS12305 PF01520 N-acetylmuramoyl-L-alanine amidase SRIM_RS12315 PF00296 Luciferase-like monooxygenase SRIM_RS12340 PF08241 Methyltransferase domain SRIM_RS12350 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS12350 PF17925 Tetracyclin repressor-like, C-terminal domain SRIM_RS12355 PF00005 ABC transporter SRIM_RS12360 PF00664 ABC transporter transmembrane region SRIM_RS12360 PF00005 ABC transporter SRIM_RS12370 PF00069 Protein kinase domain SRIM_RS12380 PF00171 Aldehyde dehydrogenase family SRIM_RS12390 PF13249 Squalene-hopene cyclase N-terminal domain SRIM_RS12390 PF13243 Squalene-hopene cyclase C-terminal domain SRIM_RS12405 PF00005 ABC transporter SRIM_RS12430 PF04978 Protein of unknown function (DUF664) SRIM_RS12440 PF00108 Thiolase, N-terminal domain SRIM_RS12440 PF02803 Thiolase, C-terminal domain SRIM_RS12445 PF00067 Cytochrome P450 SRIM_RS12470 PF00115 Cytochrome C and Quinol oxidase polypeptide I SRIM_RS12485 PF00248 Aldo/keto reductase family SRIM_RS12495 PF08946 Osmosensory transporter coiled coil SRIM_RS12495 PF00083 Sugar (and other) transporter SRIM_RS12530 PF00583 Acetyltransferase (GNAT) family SRIM_RS12535 PF07690 Major Facilitator Superfamily SRIM_RS12540 PF01520 N-acetylmuramoyl-L-alanine amidase SRIM_RS12540 PF01471 Putative peptidoglycan binding domain SRIM_RS12545 PF13419 Haloacid dehalogenase-like hydrolase SRIM_RS12570 PF07681 DoxX SRIM_RS12590 PF00582 Universal stress protein family SRIM_RS12620 PF00561 alpha/beta hydrolase fold SRIM_RS12635 PF04542 Sigma-70 region 2 SRIM_RS12635 PF08281 Sigma-70, region 4 SRIM_RS12645 PF00403 Heavy-metal-associated domain SRIM_RS12655 PF00067 Cytochrome P450 SRIM_RS12665 PF00005 ABC transporter SRIM_RS12670 PF01032 FecCD transport family SRIM_RS12680 PF03824 High-affinity nickel-transport protein SRIM_RS12690 PF07681 DoxX SRIM_RS12715 PF13378 Enolase C-terminal domain-like SRIM_RS12715 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SRIM_RS12730 PF01596 O-methyltransferase SRIM_RS12735 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS12735 PF00072 Response regulator receiver domain SRIM_RS12740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS12740 PF07730 Histidine kinase SRIM_RS12745 PF09335 SNARE associated Golgi protein SRIM_RS12765 PF02342 TerD domain SRIM_RS12770 PF02342 TerD domain SRIM_RS12780 PF02342 TerD domain SRIM_RS12785 PF02342 TerD domain SRIM_RS12790 PF00578 AhpC/TSA family SRIM_RS12795 PF11253 Protein of unknown function (DUF3052) SRIM_RS12800 PF00456 Transketolase, thiamine diphosphate binding domain SRIM_RS12800 PF17831 Pyruvate dehydrogenase E1 component middle domain SRIM_RS12815 PF07690 Major Facilitator Superfamily SRIM_RS12820 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS12820 PF17754 MftR C-terminal domain SRIM_RS12835 PF07730 Histidine kinase SRIM_RS12840 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS12840 PF00072 Response regulator receiver domain SRIM_RS12855 PF00248 Aldo/keto reductase family SRIM_RS12860 PF13411 MerR HTH family regulatory protein SRIM_RS12870 PF02678 Pirin SRIM_RS12870 PF17954 Quercetinase C-terminal cupin domain SRIM_RS12875 PF17853 GGDEF-like domain SRIM_RS12875 PF13556 PucR C-terminal helix-turn-helix domain SRIM_RS12880 PF00698 Acyl transferase domain SRIM_RS12885 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SRIM_RS12885 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SRIM_RS12890 PF00550 Phosphopantetheine attachment site SRIM_RS12895 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS12895 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS12925 PF07691 PA14 domain SRIM_RS12925 PF01915 Glycosyl hydrolase family 3 C-terminal domain SRIM_RS12925 PF00933 Glycosyl hydrolase family 3 N terminal domain SRIM_RS12925 PF14310 Fibronectin type III-like domain SRIM_RS12930 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS12930 PF08361 MAATS-type transcriptional repressor, C-terminal region SRIM_RS12945 PF00294 pfkB family carbohydrate kinase SRIM_RS12950 PF13407 Periplasmic binding protein domain SRIM_RS12955 PF02653 Branched-chain amino acid transport system / permease component SRIM_RS12970 PF02566 OsmC-like protein SRIM_RS12975 PF00107 Zinc-binding dehydrogenase SRIM_RS12975 PF16884 N-terminal domain of oxidoreductase SRIM_RS12985 PF01323 DSBA-like thioredoxin domain SRIM_RS12995 PF07690 Major Facilitator Superfamily SRIM_RS13005 PF07905 Purine catabolism regulatory protein-like family SRIM_RS13005 PF13556 PucR C-terminal helix-turn-helix domain SRIM_RS13020 PF00534 Glycosyl transferases group 1 SRIM_RS13020 PF13439 Glycosyltransferase Family 4 SRIM_RS13025 PF08241 Methyltransferase domain SRIM_RS13030 PF11847 Alpha-(1->3)-arabinofuranosyltransferase SRIM_RS13040 PF03551 Transcriptional regulator PadR-like family SRIM_RS13040 PF13847 Methyltransferase domain SRIM_RS13060 PF17755 UvrA DNA-binding domain SRIM_RS13060 PF17760 UvrA interaction domain SRIM_RS13060 PF00005 ABC transporter SRIM_RS13075 PF00300 Histidine phosphatase superfamily (branch 1) SRIM_RS13080 PF00085 Thioredoxin SRIM_RS13085 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SRIM_RS13085 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SRIM_RS13085 PF01799 [2Fe-2S] binding domain SRIM_RS13095 PF17853 GGDEF-like domain SRIM_RS13095 PF05651 Putative sugar diacid recognition SRIM_RS13095 PF13556 PucR C-terminal helix-turn-helix domain SRIM_RS13105 PF00534 Glycosyl transferases group 1 SRIM_RS13105 PF13439 Glycosyltransferase Family 4 SRIM_RS13140 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SRIM_RS13140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SRIM_RS13145 PF04542 Sigma-70 region 2 SRIM_RS13145 PF00140 Sigma-70 factor, region 1.2 SRIM_RS13145 PF04545 Sigma-70, region 4 SRIM_RS13145 PF04539 Sigma-70 region 3 SRIM_RS13150 PF08278 DNA primase DnaG DnaB-binding SRIM_RS13150 PF01807 CHC2 zinc finger SRIM_RS13150 PF08275 DNA primase catalytic core, N-terminal domain SRIM_RS13150 PF13662 Toprim domain SRIM_RS13150 PF10410 DnaB-helicase binding domain of primase SRIM_RS13155 PF00291 Pyridoxal-phosphate dependent enzyme SRIM_RS13160 PF14759 Reductase C-terminal SRIM_RS13160 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS13165 PF01966 HD domain SRIM_RS13165 PF13286 Phosphohydrolase-associated domain SRIM_RS13175 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SRIM_RS13175 PF00384 Molybdopterin oxidoreductase SRIM_RS13175 PF01568 Molydopterin dinucleotide binding domain SRIM_RS13190 PF00962 Adenosine/AMP deaminase SRIM_RS13230 PF11806 Domain of unknown function (DUF3327) SRIM_RS13230 PF00756 Putative esterase SRIM_RS13260 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SRIM_RS13260 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SRIM_RS13265 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS13275 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS13275 PF00072 Response regulator receiver domain SRIM_RS13285 PF04324 BFD-like [2Fe-2S] binding domain SRIM_RS13285 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SRIM_RS13285 PF18267 Rubredoxin NAD+ reductase C-terminal domain SRIM_RS13285 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SRIM_RS13285 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS13290 PF18267 Rubredoxin NAD+ reductase C-terminal domain SRIM_RS13290 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SRIM_RS13290 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SRIM_RS13290 PF04324 BFD-like [2Fe-2S] binding domain SRIM_RS13290 PF13806 Rieske-like [2Fe-2S] domain SRIM_RS13290 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS13300 PF00106 short chain dehydrogenase SRIM_RS13310 PF13520 Amino acid permease SRIM_RS13320 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal SRIM_RS13320 PF00775 Dioxygenase SRIM_RS13350 PF07690 Major Facilitator Superfamily SRIM_RS13355 PF00561 alpha/beta hydrolase fold SRIM_RS13360 PF00376 MerR family regulatory protein SRIM_RS13360 PF09278 MerR, DNA binding SRIM_RS13375 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS13380 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS13390 PF02668 Taurine catabolism dioxygenase TauD, TfdA family SRIM_RS13400 PF00391 PEP-utilising enzyme, mobile domain SRIM_RS13400 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SRIM_RS13400 PF02896 PEP-utilising enzyme, TIM barrel domain SRIM_RS13405 PF01207 Dihydrouridine synthase (Dus) SRIM_RS13410 PF07690 Major Facilitator Superfamily SRIM_RS13420 PF07690 Major Facilitator Superfamily SRIM_RS13425 PF00248 Aldo/keto reductase family SRIM_RS13440 PF00072 Response regulator receiver domain SRIM_RS13440 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS13455 PF03129 Anticodon binding domain SRIM_RS13455 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SRIM_RS13460 PF01297 Zinc-uptake complex component A periplasmic SRIM_RS13460 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SRIM_RS13465 PF00005 ABC transporter SRIM_RS13470 PF00950 ABC 3 transport family SRIM_RS13475 PF01475 Ferric uptake regulator family SRIM_RS13480 PF01255 Putative undecaprenyl diphosphate synthase SRIM_RS13485 PF02565 Recombination protein O C terminal SRIM_RS13485 PF11967 Recombination protein O N terminal SRIM_RS13495 PF08502 LeuA allosteric (dimerisation) domain SRIM_RS13495 PF00682 HMGL-like SRIM_RS13500 PF16485 Protealysin propeptide SRIM_RS13500 PF02868 Thermolysin metallopeptidase, alpha-helical domain SRIM_RS13500 PF01447 Thermolysin metallopeptidase, catalytic domain SRIM_RS13510 PF00232 Glycosyl hydrolase family 1 SRIM_RS13520 PF01926 50S ribosome-binding GTPase SRIM_RS13520 PF07650 KH domain SRIM_RS13525 PF00999 Sodium/hydrogen exchanger family SRIM_RS13535 PF01070 FMN-dependent dehydrogenase SRIM_RS13540 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS13545 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS13545 PF00501 AMP-binding enzyme SRIM_RS13580 PF07690 Major Facilitator Superfamily SRIM_RS13585 PF00571 CBS domain SRIM_RS13585 PF03471 Transporter associated domain SRIM_RS13585 PF01595 Cyclin M transmembrane N-terminal domain SRIM_RS13590 PF02130 Uncharacterized protein family UPF0054 SRIM_RS13595 PF02562 PhoH-like protein SRIM_RS13600 PF00294 pfkB family carbohydrate kinase SRIM_RS13605 PF11975 Family 4 glycosyl hydrolase C-terminal domain SRIM_RS13605 PF02056 Family 4 glycosyl hydrolase SRIM_RS13615 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS13615 PF00107 Zinc-binding dehydrogenase SRIM_RS13620 PF13378 Enolase C-terminal domain-like SRIM_RS13620 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SRIM_RS13630 PF12706 Beta-lactamase superfamily domain SRIM_RS13630 PF00753 Metallo-beta-lactamase superfamily SRIM_RS13635 PF01230 HIT domain SRIM_RS13650 PF04452 RNA methyltransferase SRIM_RS13655 PF03060 Nitronate monooxygenase SRIM_RS13660 PF00684 DnaJ central domain SRIM_RS13660 PF00226 DnaJ domain SRIM_RS13660 PF01556 DnaJ C terminal domain SRIM_RS13665 PF01628 HrcA protein C terminal domain SRIM_RS13685 PF04055 Radical SAM superfamily SRIM_RS13695 PF00072 Response regulator receiver domain SRIM_RS13695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS13695 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS13695 PF09308 LuxQ, periplasmic SRIM_RS13700 PF00072 Response regulator receiver domain SRIM_RS13705 PF00501 AMP-binding enzyme SRIM_RS13715 PF00679 Elongation factor G C-terminus SRIM_RS13715 PF06421 GTP-binding protein LepA C-terminus SRIM_RS13715 PF03144 Elongation factor Tu domain 2 SRIM_RS13715 PF00009 Elongation factor Tu GTP binding domain SRIM_RS13720 PF01649 Ribosomal protein S20 SRIM_RS13745 PF02082 Transcriptional regulator SRIM_RS13750 PF12849 PBP superfamily domain SRIM_RS13755 PF00753 Metallo-beta-lactamase superfamily SRIM_RS13760 PF10531 SLBB domain SRIM_RS13765 PF02645 Uncharacterised protein, DegV family COG1307 SRIM_RS13775 PF13603 Leucyl-tRNA synthetase, Domain 2 SRIM_RS13775 PF08264 Anticodon-binding domain of tRNA SRIM_RS13775 PF09334 tRNA synthetases class I (M) SRIM_RS13785 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SRIM_RS13785 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SRIM_RS13785 PF10531 SLBB domain SRIM_RS13800 PF09594 Glycosyltransferase family 87 SRIM_RS13805 PF07732 Multicopper oxidase SRIM_RS13805 PF07731 Multicopper oxidase SRIM_RS13825 PF00300 Histidine phosphatase superfamily (branch 1) SRIM_RS13840 PF01467 Cytidylyltransferase-like SRIM_RS13855 PF01435 Peptidase family M48 SRIM_RS13870 PF00171 Aldehyde dehydrogenase family SRIM_RS13880 PF01472 PUA domain SRIM_RS13880 PF00696 Amino acid kinase family SRIM_RS13885 PF01926 50S ribosome-binding GTPase SRIM_RS13885 PF09269 Domain of unknown function (DUF1967) SRIM_RS13885 PF01018 GTP1/OBG SRIM_RS13890 PF01016 Ribosomal L27 protein SRIM_RS13895 PF00829 Ribosomal prokaryotic L21 protein SRIM_RS13900 PF10150 Ribonuclease E/G family SRIM_RS13920 PF05235 CHAD domain SRIM_RS13920 PF01928 CYTH domain SRIM_RS13930 PF00266 Aminotransferase class-V SRIM_RS13940 PF01098 Cell cycle protein SRIM_RS13945 PF03717 Penicillin-binding Protein dimerisation domain SRIM_RS13945 PF00905 Penicillin binding protein transpeptidase domain SRIM_RS13955 PF04085 rod shape-determining protein MreC SRIM_RS13965 PF00334 Nucleoside diphosphate kinase SRIM_RS13975 PF02875 Mur ligase family, glutamate ligase domain SRIM_RS13975 PF08245 Mur ligase middle domain SRIM_RS13980 PF00905 Penicillin binding protein transpeptidase domain SRIM_RS13990 PF00133 tRNA synthetases class I (I, L, M and V) SRIM_RS13990 PF10458 Valyl tRNA synthetase tRNA binding arm SRIM_RS13990 PF08264 Anticodon-binding domain of tRNA SRIM_RS14005 PF06689 ClpX C4-type zinc finger SRIM_RS14005 PF10431 C-terminal, D2-small domain, of ClpB protein SRIM_RS14005 PF07724 AAA domain (Cdc48 subfamily) SRIM_RS14010 PF00574 Clp protease SRIM_RS14015 PF00574 Clp protease SRIM_RS14020 PF05698 Bacterial trigger factor protein (TF) C-terminus SRIM_RS14020 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SRIM_RS14020 PF05697 Bacterial trigger factor protein (TF) SRIM_RS14035 PF03960 ArsC family SRIM_RS14045 PF01757 Acyltransferase family SRIM_RS14050 PF00005 ABC transporter SRIM_RS14055 PF00999 Sodium/hydrogen exchanger family SRIM_RS14070 PF13530 Sterol carrier protein domain SRIM_RS14070 PF17668 Acetyltransferase (GNAT) domain SRIM_RS14075 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SRIM_RS14075 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SRIM_RS14075 PF06827 Zinc finger found in FPG and IleRS SRIM_RS14080 PF02502 Ribose/Galactose Isomerase SRIM_RS14090 PF00069 Protein kinase domain SRIM_RS14100 PF02632 BioY family SRIM_RS14105 PF00324 Amino acid permease SRIM_RS14110 PF00324 Amino acid permease SRIM_RS14115 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SRIM_RS14115 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SRIM_RS14120 PF01323 DSBA-like thioredoxin domain SRIM_RS14125 PF11838 ERAP1-like C-terminal domain SRIM_RS14125 PF01433 Peptidase family M1 domain SRIM_RS14140 PF00082 Subtilase family SRIM_RS14145 PF01118 Semialdehyde dehydrogenase, NAD binding domain SRIM_RS14145 PF02774 Semialdehyde dehydrogenase, dimerisation domain SRIM_RS14155 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system SRIM_RS14170 PF11838 ERAP1-like C-terminal domain SRIM_RS14170 PF01433 Peptidase family M1 domain SRIM_RS14175 PF03561 Allantoicase repeat SRIM_RS14180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS14180 PF03466 LysR substrate binding domain SRIM_RS14185 PF03405 Fatty acid desaturase SRIM_RS14200 PF02446 4-alpha-glucanotransferase SRIM_RS14210 PF00041 Fibronectin type III domain SRIM_RS14210 PF00754 F5/8 type C domain SRIM_RS14210 PF00963 Cohesin domain SRIM_RS14210 PF07555 beta-N-acetylglucosaminidase SRIM_RS14210 PF02838 Glycosyl hydrolase family 20, domain 2 SRIM_RS14220 PF00924 Mechanosensitive ion channel SRIM_RS14250 PF00111 2Fe-2S iron-sulfur cluster binding domain SRIM_RS14250 PF01799 [2Fe-2S] binding domain SRIM_RS14250 PF10518 TAT (twin-arginine translocation) pathway signal sequence SRIM_RS14255 PF00941 FAD binding domain in molybdopterin dehydrogenase SRIM_RS14255 PF03450 CO dehydrogenase flavoprotein C-terminal domain SRIM_RS14260 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SRIM_RS14260 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SRIM_RS14290 PF00480 ROK family SRIM_RS14295 PF13416 Bacterial extracellular solute-binding protein SRIM_RS14300 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS14305 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS14310 PF02056 Family 4 glycosyl hydrolase SRIM_RS14310 PF11975 Family 4 glycosyl hydrolase C-terminal domain SRIM_RS14325 PF00497 Bacterial extracellular solute-binding proteins, family 3 SRIM_RS14335 PF16919 Protein kinase G rubredoxin domain SRIM_RS14335 PF00069 Protein kinase domain SRIM_RS14335 PF16918 Protein kinase G tetratricopeptide repeat SRIM_RS14360 PF01152 Bacterial-like globin SRIM_RS14375 PF00005 ABC transporter SRIM_RS14375 PF12848 ABC transporter SRIM_RS14385 PF00436 Single-strand binding protein family SRIM_RS14390 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SRIM_RS14390 PF01926 50S ribosome-binding GTPase SRIM_RS14415 PF03621 MbtH-like protein SRIM_RS14445 PF01494 FAD binding domain SRIM_RS14480 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading SRIM_RS14525 PF00005 ABC transporter SRIM_RS14530 PF17885 Styrene monooxygenase A putative substrate binding domain SRIM_RS14540 PF00171 Aldehyde dehydrogenase family SRIM_RS14545 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SRIM_RS14545 PF00205 Thiamine pyrophosphate enzyme, central domain SRIM_RS14545 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SRIM_RS14550 PF04962 KduI/IolB family SRIM_RS14560 PF00294 pfkB family carbohydrate kinase SRIM_RS14570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SRIM_RS14570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SRIM_RS14575 PF01261 Xylose isomerase-like TIM barrel SRIM_RS14580 PF00083 Sugar (and other) transporter SRIM_RS14595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SRIM_RS14595 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SRIM_RS14605 PF00999 Sodium/hydrogen exchanger family SRIM_RS14605 PF02080 TrkA-C domain SRIM_RS14605 PF02254 TrkA-N domain SRIM_RS14615 PF00403 Heavy-metal-associated domain SRIM_RS14620 PF00285 Citrate synthase, C-terminal domain SRIM_RS14625 PF14490 Helix-hairpin-helix containing domain SRIM_RS14625 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SRIM_RS14625 PF13538 UvrD-like helicase C-terminal domain SRIM_RS14640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SRIM_RS14640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SRIM_RS14645 PF00356 Bacterial regulatory proteins, lacI family SRIM_RS14660 PF01915 Glycosyl hydrolase family 3 C-terminal domain SRIM_RS14660 PF00933 Glycosyl hydrolase family 3 N terminal domain SRIM_RS14670 PF05576 PS-10 peptidase S37 SRIM_RS14675 PF00005 ABC transporter SRIM_RS14675 PF00664 ABC transporter transmembrane region SRIM_RS14695 PF00005 ABC transporter SRIM_RS14695 PF00664 ABC transporter transmembrane region SRIM_RS14705 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS14705 PF08359 YsiA-like protein, C-terminal region SRIM_RS14710 PF00390 Malic enzyme, N-terminal domain SRIM_RS14710 PF03949 Malic enzyme, NAD binding domain SRIM_RS14755 PF00491 Arginase family SRIM_RS14760 PF15698 Phosphatase SRIM_RS14770 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS14770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS14770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS14775 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS14780 PF01039 Carboxyl transferase domain SRIM_RS14785 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SRIM_RS14785 PF00364 Biotin-requiring enzyme SRIM_RS14785 PF00289 Biotin carboxylase, N-terminal domain SRIM_RS14785 PF02785 Biotin carboxylase C-terminal domain SRIM_RS14790 PF00682 HMGL-like SRIM_RS14795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS14795 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS14795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS14800 PF00728 Glycosyl hydrolase family 20, catalytic domain SRIM_RS14800 PF02838 Glycosyl hydrolase family 20, domain 2 SRIM_RS14810 PF01380 SIS domain SRIM_RS14815 PF00582 Universal stress protein family SRIM_RS14825 PF01965 DJ-1/PfpI family SRIM_RS14825 PF12833 Helix-turn-helix domain SRIM_RS14830 PF00929 Exonuclease SRIM_RS14840 PF13460 NAD(P)H-binding SRIM_RS14855 PF01341 Glycosyl hydrolases family 6 SRIM_RS14855 PF00041 Fibronectin type III domain SRIM_RS14855 PF00553 Cellulose binding domain SRIM_RS14860 PF00356 Bacterial regulatory proteins, lacI family SRIM_RS14870 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS14875 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS14880 PF00232 Glycosyl hydrolase family 1 SRIM_RS14885 PF02839 Carbohydrate binding domain SRIM_RS14890 PF00672 HAMP domain SRIM_RS14890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS14890 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS14890 PF16750 Sensor domain of 2-component histidine kinase SRIM_RS14895 PF00072 Response regulator receiver domain SRIM_RS14895 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS14920 PF00300 Histidine phosphatase superfamily (branch 1) SRIM_RS14965 PF03707 Bacterial signalling protein N terminal repeat SRIM_RS14965 PF00990 Diguanylate cyclase, GGDEF domain SRIM_RS14965 PF00563 EAL domain SRIM_RS14970 PF00296 Luciferase-like monooxygenase SRIM_RS14980 PF17645 Arylmalonate decarboxylase SRIM_RS14985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SRIM_RS14985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SRIM_RS14990 PF01425 Amidase SRIM_RS15005 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS15010 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS15015 PF00005 ABC transporter SRIM_RS15030 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading SRIM_RS15030 PF18416 N-acetylglucosamine binding protein domain 2 SRIM_RS15035 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading SRIM_RS15035 PF18416 N-acetylglucosamine binding protein domain 2 SRIM_RS15045 PF00877 NlpC/P60 family SRIM_RS15065 PF07729 FCD domain SRIM_RS15065 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS15080 PF01341 Glycosyl hydrolases family 6 SRIM_RS15080 PF00553 Cellulose binding domain SRIM_RS15100 PF13344 Haloacid dehalogenase-like hydrolase SRIM_RS15105 PF01547 Bacterial extracellular solute-binding protein SRIM_RS15110 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS15115 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS15120 PF08402 TOBE domain SRIM_RS15120 PF00005 ABC transporter SRIM_RS15135 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS15135 PF07702 UTRA domain SRIM_RS15145 PF01047 MarR family SRIM_RS15145 PF00480 ROK family SRIM_RS15150 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SRIM_RS15150 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SRIM_RS15155 PF03928 Haem-degrading SRIM_RS15165 PF01557 Fumarylacetoacetate (FAA) hydrolase family SRIM_RS15170 PF02096 60Kd inner membrane protein SRIM_RS15170 PF14849 YidC periplasmic domain SRIM_RS15190 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SRIM_RS15190 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SRIM_RS15200 PF00474 Sodium:solute symporter family SRIM_RS15210 PF04203 Sortase domain SRIM_RS15215 PF04286 Protein of unknown function (DUF445) SRIM_RS15230 PF00005 ABC transporter SRIM_RS15230 PF13732 Domain of unknown function (DUF4162) SRIM_RS15245 PF00912 Transglycosylase SRIM_RS15245 PF00905 Penicillin binding protein transpeptidase domain SRIM_RS15250 PF00893 Small Multidrug Resistance protein SRIM_RS15255 PF00166 Chaperonin 10 Kd subunit SRIM_RS15265 PF00578 AhpC/TSA family SRIM_RS15270 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS15270 PF00672 HAMP domain SRIM_RS15270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS15280 PF08946 Osmosensory transporter coiled coil SRIM_RS15280 PF00083 Sugar (and other) transporter SRIM_RS15300 PF01725 Ham1 family SRIM_RS15315 PF03725 3' exoribonuclease family, domain 2 SRIM_RS15315 PF01138 3' exoribonuclease family, domain 1 SRIM_RS15320 PF00367 phosphotransferase system, EIIB SRIM_RS15325 PF02378 Phosphotransferase system, EIIC SRIM_RS15330 PF02378 Phosphotransferase system, EIIC SRIM_RS15335 PF12706 Beta-lactamase superfamily domain SRIM_RS15340 PF00291 Pyridoxal-phosphate dependent enzyme SRIM_RS15345 PF02597 ThiS family SRIM_RS15355 PF00005 ABC transporter SRIM_RS15360 PF01032 FecCD transport family SRIM_RS15365 PF01497 Periplasmic binding protein SRIM_RS15370 PF14464 Prokaryotic homologs of the JAB domain SRIM_RS15375 PF00324 Amino acid permease SRIM_RS15385 PF02617 ATP-dependent Clp protease adaptor protein ClpS SRIM_RS15390 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SRIM_RS15390 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SRIM_RS15395 PF00857 Isochorismatase family SRIM_RS15405 PF00801 PKD domain SRIM_RS15405 PF05547 Immune inhibitor A peptidase M6 SRIM_RS15425 PF04686 Streptomyces sporulation and cell division protein, SsgA SRIM_RS15435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SRIM_RS15435 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS15440 PF16320 Ribosomal protein L7/L12 dimerisation domain SRIM_RS15440 PF00542 Ribosomal protein L7/L12 C-terminal domain SRIM_RS15445 PF01565 FAD binding domain SRIM_RS15445 PF02913 FAD linked oxidases, C-terminal domain SRIM_RS15450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SRIM_RS15460 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS15465 PF00005 ABC transporter SRIM_RS15465 PF00571 CBS domain SRIM_RS15470 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS15475 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SRIM_RS15490 PF04851 Type III restriction enzyme, res subunit SRIM_RS15495 PF07690 Major Facilitator Superfamily SRIM_RS15500 PF01339 CheB methylesterase SRIM_RS15500 PF00072 Response regulator receiver domain SRIM_RS15515 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SRIM_RS15515 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SRIM_RS15520 PF00111 2Fe-2S iron-sulfur cluster binding domain SRIM_RS15520 PF01799 [2Fe-2S] binding domain SRIM_RS15525 PF03450 CO dehydrogenase flavoprotein C-terminal domain SRIM_RS15525 PF00941 FAD binding domain in molybdopterin dehydrogenase SRIM_RS15530 PF00728 Glycosyl hydrolase family 20, catalytic domain SRIM_RS15530 PF02838 Glycosyl hydrolase family 20, domain 2 SRIM_RS15530 PF07691 PA14 domain SRIM_RS15535 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS15540 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS15560 PF07690 Major Facilitator Superfamily SRIM_RS15570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS15570 PF03466 LysR substrate binding domain SRIM_RS15575 PF02622 Uncharacterized ACR, COG1678 SRIM_RS15580 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SRIM_RS15585 PF00216 Bacterial DNA-binding protein SRIM_RS15590 PF00390 Malic enzyme, N-terminal domain SRIM_RS15590 PF03949 Malic enzyme, NAD binding domain SRIM_RS15595 PF13538 UvrD-like helicase C-terminal domain SRIM_RS15605 PF04545 Sigma-70, region 4 SRIM_RS15605 PF04542 Sigma-70 region 2 SRIM_RS15625 PF07690 Major Facilitator Superfamily SRIM_RS15655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS15655 PF03466 LysR substrate binding domain SRIM_RS15670 PF01668 SmpB protein SRIM_RS15675 PF03572 Peptidase family S41 SRIM_RS15675 PF00595 PDZ domain SRIM_RS15680 PF02687 FtsX-like permease family SRIM_RS15680 PF18075 FtsX extracellular domain SRIM_RS15685 PF00005 ABC transporter SRIM_RS15700 PF03462 PCRF domain SRIM_RS15700 PF00472 RF-1 domain SRIM_RS15705 PF00069 Protein kinase domain SRIM_RS15710 PF00069 Protein kinase domain SRIM_RS15715 PF01580 FtsK/SpoIIIE family SRIM_RS15720 PF01547 Bacterial extracellular solute-binding protein SRIM_RS15725 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS15730 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS15740 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SRIM_RS15745 PF00535 Glycosyl transferase family 2 SRIM_RS15750 PF01370 NAD dependent epimerase/dehydratase family SRIM_RS15755 PF00535 Glycosyl transferase family 2 SRIM_RS15760 PF13439 Glycosyltransferase Family 4 SRIM_RS15760 PF00534 Glycosyl transferases group 1 SRIM_RS15765 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SRIM_RS15775 PF00535 Glycosyl transferase family 2 SRIM_RS15790 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS15790 PF16859 Tetracyclin repressor-like, C-terminal domain SRIM_RS15800 PF00005 ABC transporter SRIM_RS15805 PF05088 Bacterial NAD-glutamate dehydrogenase SRIM_RS15830 PF07516 SecA Wing and Scaffold domain SRIM_RS15830 PF01043 SecA preprotein cross-linking domain SRIM_RS15830 PF07517 SecA DEAD-like domain SRIM_RS15845 PF00072 Response regulator receiver domain SRIM_RS15845 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS15850 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SRIM_RS15850 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SRIM_RS15860 PF10646 Sporulation and spore germination SRIM_RS15860 PF10647 Lipoprotein LpqB beta-propeller domain SRIM_RS15865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS15865 PF00672 HAMP domain SRIM_RS15865 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS15870 PF00072 Response regulator receiver domain SRIM_RS15870 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS15875 PF01008 Initiation factor 2 subunit family SRIM_RS15895 PF17863 AAA lid domain SRIM_RS15895 PF07726 ATPase family associated with various cellular activities (AAA) SRIM_RS15935 PF05221 S-adenosyl-L-homocysteine hydrolase SRIM_RS15935 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SRIM_RS15955 PF01238 Phosphomannose isomerase type I SRIM_RS15965 PF03966 Trm112p-like protein SRIM_RS15970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SRIM_RS15970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SRIM_RS15970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SRIM_RS15970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SRIM_RS15975 PF02652 L-lactate permease SRIM_RS15995 PF00534 Glycosyl transferases group 1 SRIM_RS15995 PF00535 Glycosyl transferase family 2 SRIM_RS16000 PF02467 Transcription factor WhiB SRIM_RS16010 PF01933 Uncharacterised protein family UPF0052 SRIM_RS16015 PF01996 F420-0:Gamma-glutamyl ligase SRIM_RS16015 PF00881 Nitroreductase family SRIM_RS16025 PF00483 Nucleotidyl transferase SRIM_RS16060 PF07690 Major Facilitator Superfamily SRIM_RS16080 PF03061 Thioesterase superfamily SRIM_RS16085 PF03816 Cell envelope-related transcriptional attenuator domain SRIM_RS16110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS16110 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS16110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS16115 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SRIM_RS16115 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SRIM_RS16115 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SRIM_RS16130 PF00731 AIR carboxylase SRIM_RS16135 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SRIM_RS16135 PF02222 ATP-grasp domain SRIM_RS16150 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS16150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS16155 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS16155 PF00072 Response regulator receiver domain SRIM_RS16160 PF00854 POT family SRIM_RS16190 PF01740 STAS domain SRIM_RS16195 PF04542 Sigma-70 region 2 SRIM_RS16195 PF04545 Sigma-70, region 4 SRIM_RS16195 PF04539 Sigma-70 region 3 SRIM_RS16200 PF13649 Methyltransferase domain SRIM_RS16205 PF07730 Histidine kinase SRIM_RS16205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS16205 PF05231 MASE1 SRIM_RS16210 PF00072 Response regulator receiver domain SRIM_RS16210 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS16220 PF01979 Amidohydrolase family SRIM_RS16225 PF01979 Amidohydrolase family SRIM_RS16230 PF01546 Peptidase family M20/M25/M40 SRIM_RS16235 PF17391 Urocanase N-terminal domain SRIM_RS16235 PF01175 Urocanase Rossmann-like domain SRIM_RS16235 PF17392 Urocanase C-terminal domain SRIM_RS16245 PF05544 Proline racemase SRIM_RS16250 PF00701 Dihydrodipicolinate synthetase family SRIM_RS16255 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS16255 PF04324 BFD-like [2Fe-2S] binding domain SRIM_RS16260 PF01266 FAD dependent oxidoreductase SRIM_RS16260 PF05690 Thiazole biosynthesis protein ThiG SRIM_RS16265 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SRIM_RS16265 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SRIM_RS16290 PF00561 alpha/beta hydrolase fold SRIM_RS16305 PF00356 Bacterial regulatory proteins, lacI family SRIM_RS16320 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin SRIM_RS16330 PF00291 Pyridoxal-phosphate dependent enzyme SRIM_RS16330 PF00571 CBS domain SRIM_RS16335 PF13472 GDSL-like Lipase/Acylhydrolase family SRIM_RS16340 PF02803 Thiolase, C-terminal domain SRIM_RS16340 PF00108 Thiolase, N-terminal domain SRIM_RS16385 PF03777 ChpA-C SRIM_RS16410 PF00005 ABC transporter SRIM_RS16415 PF02687 FtsX-like permease family SRIM_RS16415 PF12704 MacB-like periplasmic core domain SRIM_RS16430 PF02541 Ppx/GppA phosphatase family SRIM_RS16445 PF03952 Enolase, N-terminal domain SRIM_RS16445 PF00113 Enolase, C-terminal TIM barrel domain SRIM_RS16450 PF06737 Transglycosylase-like domain SRIM_RS16455 PF06737 Transglycosylase-like domain SRIM_RS16460 PF00067 Cytochrome P450 SRIM_RS16470 PF03466 LysR substrate binding domain SRIM_RS16470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS16475 PF07690 Major Facilitator Superfamily SRIM_RS16480 PF03819 MazG nucleotide pyrophosphohydrolase domain SRIM_RS16510 PF02559 CarD-like/TRCF domain SRIM_RS16510 PF00270 DEAD/DEAH box helicase SRIM_RS16510 PF17757 UvrB interaction domain SRIM_RS16510 PF03461 TRCF domain SRIM_RS16510 PF00271 Helicase conserved C-terminal domain SRIM_RS16515 PF07690 Major Facilitator Superfamily SRIM_RS16525 PF03816 Cell envelope-related transcriptional attenuator domain SRIM_RS16550 PF07730 Histidine kinase SRIM_RS16565 PF12804 MobA-like NTP transferase domain SRIM_RS16565 PF00132 Bacterial transferase hexapeptide (six repeats) SRIM_RS16570 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SRIM_RS16570 PF14572 Phosphoribosyl synthetase-associated domain SRIM_RS16575 PF14693 Ribosomal protein TL5, C-terminal domain SRIM_RS16575 PF01386 Ribosomal L25p family SRIM_RS16580 PF01195 Peptidyl-tRNA hydrolase SRIM_RS16595 PF00311 Phosphoenolpyruvate carboxylase SRIM_RS16605 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS16605 PF17932 Tetracyclin repressor-like, C-terminal domain SRIM_RS16615 PF13649 Methyltransferase domain SRIM_RS16620 PF01047 MarR family SRIM_RS16630 PF08533 Beta-galactosidase C-terminal domain SRIM_RS16630 PF08532 Beta-galactosidase trimerisation domain SRIM_RS16630 PF02449 Beta-galactosidase SRIM_RS16635 PF00072 Response regulator receiver domain SRIM_RS16635 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS16640 PF08544 GHMP kinases C terminal SRIM_RS16640 PF00288 GHMP kinases N terminal domain SRIM_RS16640 PF10509 Galactokinase galactose-binding signature SRIM_RS16645 PF16363 GDP-mannose 4,6 dehydratase SRIM_RS16650 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SRIM_RS16650 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SRIM_RS16655 PF00474 Sodium:solute symporter family SRIM_RS16665 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS16665 PF00072 Response regulator receiver domain SRIM_RS16670 PF00005 ABC transporter SRIM_RS16670 PF12848 ABC transporter SRIM_RS16670 PF16326 ABC transporter C-terminal domain SRIM_RS16680 PF08544 GHMP kinases C terminal SRIM_RS16680 PF00288 GHMP kinases N terminal domain SRIM_RS16685 PF00398 Ribosomal RNA adenine dimethylase SRIM_RS16690 PF03990 G5-linked-Ubiquitin-like domain SRIM_RS16690 PF07501 G5 domain SRIM_RS16690 PF06725 3D domain SRIM_RS16695 PF01026 TatD related DNase SRIM_RS16705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SRIM_RS16710 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase SRIM_RS16710 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase SRIM_RS16720 PF00905 Penicillin binding protein transpeptidase domain SRIM_RS16720 PF03717 Penicillin-binding Protein dimerisation domain SRIM_RS16740 PF00144 Beta-lactamase SRIM_RS16745 PF00005 ABC transporter SRIM_RS16755 PF01891 Cobalt uptake substrate-specific transmembrane region SRIM_RS16755 PF13190 PDGLE domain SRIM_RS16760 PF07690 Major Facilitator Superfamily SRIM_RS16765 PF00144 Beta-lactamase SRIM_RS16770 PF03176 MMPL family SRIM_RS16775 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS16775 PF16859 Tetracyclin repressor-like, C-terminal domain SRIM_RS16780 PF07676 WD40-like Beta Propeller Repeat SRIM_RS16780 PF03572 Peptidase family S41 SRIM_RS16780 PF14684 Tricorn protease C1 domain SRIM_RS16780 PF14685 Tricorn protease PDZ domain SRIM_RS16800 PF00561 alpha/beta hydrolase fold SRIM_RS16805 PF00743 Flavin-binding monooxygenase-like SRIM_RS16815 PF00857 Isochorismatase family SRIM_RS16820 PF01042 Endoribonuclease L-PSP SRIM_RS16825 PF01638 HxlR-like helix-turn-helix SRIM_RS16890 PF03372 Endonuclease/Exonuclease/phosphatase family SRIM_RS16910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS16910 PF00672 HAMP domain SRIM_RS16910 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS16920 PF07739 TipAS antibiotic-recognition domain SRIM_RS16920 PF13411 MerR HTH family regulatory protein SRIM_RS16925 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase SRIM_RS16925 PF03033 Glycosyltransferase family 28 N-terminal domain SRIM_RS16945 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS16950 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS16960 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SRIM_RS16960 PF00356 Bacterial regulatory proteins, lacI family SRIM_RS16965 PF01476 LysM domain SRIM_RS16965 PF08525 Opacity-associated protein A N-terminal motif SRIM_RS16965 PF01551 Peptidase family M23 SRIM_RS16985 PF13302 Acetyltransferase (GNAT) domain SRIM_RS16990 PF00994 Probable molybdopterin binding domain SRIM_RS16995 PF01967 MoaC family SRIM_RS17000 PF00994 Probable molybdopterin binding domain SRIM_RS17000 PF03454 MoeA C-terminal region (domain IV) SRIM_RS17000 PF03453 MoeA N-terminal region (domain I and II) SRIM_RS17005 PF00483 Nucleotidyl transferase SRIM_RS17010 PF01812 5-formyltetrahydrofolate cyclo-ligase family SRIM_RS17015 PF01804 Penicillin amidase SRIM_RS17020 PF00999 Sodium/hydrogen exchanger family SRIM_RS17020 PF03471 Transporter associated domain SRIM_RS17020 PF02080 TrkA-C domain SRIM_RS17025 PF02660 Glycerol-3-phosphate acyltransferase SRIM_RS17035 PF01048 Phosphorylase superfamily SRIM_RS17040 PF01741 Large-conductance mechanosensitive channel, MscL SRIM_RS17050 PF01965 DJ-1/PfpI family SRIM_RS17060 PF16177 Acetyl-coenzyme A synthetase N-terminus SRIM_RS17060 PF00501 AMP-binding enzyme SRIM_RS17060 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS17065 PF07690 Major Facilitator Superfamily SRIM_RS17075 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS17075 PF07702 UTRA domain SRIM_RS17080 PF01925 Sulfite exporter TauE/SafE SRIM_RS17095 PF13411 MerR HTH family regulatory protein SRIM_RS17105 PF07687 Peptidase dimerisation domain SRIM_RS17105 PF01546 Peptidase family M20/M25/M40 SRIM_RS17120 PF03576 Peptidase family S58 SRIM_RS17135 PF02515 CoA-transferase family III SRIM_RS17145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SRIM_RS17145 PF02378 Phosphotransferase system, EIIC SRIM_RS17150 PF00294 pfkB family carbohydrate kinase SRIM_RS17155 PF08220 DeoR-like helix-turn-helix domain SRIM_RS17155 PF00455 DeoR C terminal sensor domain SRIM_RS17160 PF04545 Sigma-70, region 4 SRIM_RS17160 PF04539 Sigma-70 region 3 SRIM_RS17160 PF04542 Sigma-70 region 2 SRIM_RS17160 PF00140 Sigma-70 factor, region 1.2 SRIM_RS17185 PF01047 MarR family SRIM_RS17190 PF07690 Major Facilitator Superfamily SRIM_RS17215 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS17235 PF01494 FAD binding domain SRIM_RS17255 PF16363 GDP-mannose 4,6 dehydratase SRIM_RS17260 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS17265 PF03756 A-factor biosynthesis hotdog domain SRIM_RS17285 PF07690 Major Facilitator Superfamily SRIM_RS17295 PF00484 Carbonic anhydrase SRIM_RS17300 PF00916 Sulfate permease family SRIM_RS17300 PF01740 STAS domain SRIM_RS17390 PF01464 Transglycosylase SLT domain SRIM_RS17575 PF01580 FtsK/SpoIIIE family SRIM_RS17575 PF09397 Ftsk gamma domain SRIM_RS17575 PF17854 FtsK alpha domain SRIM_RS17610 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS17610 PF07702 UTRA domain SRIM_RS17820 PF04545 Sigma-70, region 4 SRIM_RS17820 PF04542 Sigma-70 region 2 SRIM_RS17840 PF00271 Helicase conserved C-terminal domain SRIM_RS17840 PF09382 RQC domain SRIM_RS17840 PF16124 RecQ zinc-binding SRIM_RS17840 PF00570 HRDC domain SRIM_RS17840 PF00270 DEAD/DEAH box helicase SRIM_RS17870 PF00672 HAMP domain SRIM_RS17870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS17870 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS17905 PF00768 D-alanyl-D-alanine carboxypeptidase SRIM_RS17905 PF07943 Penicillin-binding protein 5, C-terminal domain SRIM_RS17930 PF00155 Aminotransferase class I and II SRIM_RS17945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SRIM_RS17950 PF00005 ABC transporter SRIM_RS17950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SRIM_RS17960 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS17960 PF12911 N-terminal TM domain of oligopeptide transport permease C SRIM_RS17965 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS17970 PF03747 ADP-ribosylglycohydrolase SRIM_RS17985 PF04055 Radical SAM superfamily SRIM_RS17990 PF00296 Luciferase-like monooxygenase SRIM_RS18025 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS18040 PF00171 Aldehyde dehydrogenase family SRIM_RS18045 PF07969 Amidohydrolase family SRIM_RS18055 PF00296 Luciferase-like monooxygenase SRIM_RS18075 PF00931 NB-ARC domain SRIM_RS18075 PF03704 Bacterial transcriptional activator domain SRIM_RS18075 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS18095 PF00501 AMP-binding enzyme SRIM_RS18095 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS18105 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS18105 PF00501 AMP-binding enzyme SRIM_RS18120 PF00378 Enoyl-CoA hydratase/isomerase SRIM_RS18140 PF00069 Protein kinase domain SRIM_RS18140 PF13360 PQQ-like domain SRIM_RS18150 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS18160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS18160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS18185 PF00561 alpha/beta hydrolase fold SRIM_RS18240 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region SRIM_RS18240 PF01243 Pyridoxamine 5'-phosphate oxidase SRIM_RS18270 PF13380 CoA binding domain SRIM_RS18270 PF13607 Succinyl-CoA ligase like flavodoxin domain SRIM_RS18275 PF00378 Enoyl-CoA hydratase/isomerase SRIM_RS18280 PF01613 Flavin reductase like domain SRIM_RS18285 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS18285 PF00107 Zinc-binding dehydrogenase SRIM_RS18290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS18290 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS18290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS18295 PF00106 short chain dehydrogenase SRIM_RS18310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS18310 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS18310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS18315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS18315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS18315 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS18325 PF03466 LysR substrate binding domain SRIM_RS18325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS18330 PF07690 Major Facilitator Superfamily SRIM_RS18340 PF00069 Protein kinase domain SRIM_RS18340 PF03793 PASTA domain SRIM_RS18345 PF00144 Beta-lactamase SRIM_RS18350 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SRIM_RS18350 PF01266 FAD dependent oxidoreductase SRIM_RS18355 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SRIM_RS18355 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SRIM_RS18355 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SRIM_RS18365 PF00478 IMP dehydrogenase / GMP reductase domain SRIM_RS18375 PF00571 CBS domain SRIM_RS18375 PF00478 IMP dehydrogenase / GMP reductase domain SRIM_RS18380 PF04542 Sigma-70 region 2 SRIM_RS18380 PF04545 Sigma-70, region 4 SRIM_RS18385 PF00072 Response regulator receiver domain SRIM_RS18385 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS18390 PF02467 Transcription factor WhiB SRIM_RS18395 PF03466 LysR substrate binding domain SRIM_RS18395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS18405 PF00106 short chain dehydrogenase SRIM_RS18415 PF00356 Bacterial regulatory proteins, lacI family SRIM_RS18425 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS18430 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS18435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SRIM_RS18435 PF01842 ACT domain SRIM_RS18435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SRIM_RS18440 PF00118 TCP-1/cpn60 chaperonin family SRIM_RS18445 PF00166 Chaperonin 10 Kd subunit SRIM_RS18450 PF00072 Response regulator receiver domain SRIM_RS18450 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS18455 PF00672 HAMP domain SRIM_RS18455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS18455 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS18460 PF03816 Cell envelope-related transcriptional attenuator domain SRIM_RS18460 PF13399 LytR cell envelope-related transcriptional attenuator SRIM_RS18465 PF01098 Cell cycle protein SRIM_RS18470 PF18096 THUMP domain-like SRIM_RS18485 PF00814 Glycoprotease family SRIM_RS18495 PF00814 Glycoprotease family SRIM_RS18510 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SRIM_RS18520 PF00842 Alanine racemase, C-terminal domain SRIM_RS18520 PF01168 Alanine racemase, N-terminal domain SRIM_RS18525 PF01256 Carbohydrate kinase SRIM_RS18525 PF03853 YjeF-related protein N-terminus SRIM_RS18530 PF01648 4'-phosphopantetheinyl transferase superfamily SRIM_RS18535 PF01380 SIS domain SRIM_RS18540 PF00485 Phosphoribulokinase / Uridine kinase family SRIM_RS18550 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SRIM_RS18550 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SRIM_RS18550 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SRIM_RS18550 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SRIM_RS18555 PF00380 Ribosomal protein S9/S16 SRIM_RS18560 PF00572 Ribosomal protein L13 SRIM_RS18570 PF00005 ABC transporter SRIM_RS18570 PF12848 ABC transporter SRIM_RS18580 PF01416 tRNA pseudouridine synthase SRIM_RS18585 PF01196 Ribosomal protein L17 SRIM_RS18590 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SRIM_RS18590 PF01000 RNA polymerase Rpb3/RpoA insert domain SRIM_RS18590 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SRIM_RS18595 PF00411 Ribosomal protein S11 SRIM_RS18600 PF00416 Ribosomal protein S13/S18 SRIM_RS18605 PF00444 Ribosomal protein L36 SRIM_RS18610 PF01176 Translation initiation factor 1A / IF-1 SRIM_RS18615 PF00557 Metallopeptidase family M24 SRIM_RS18620 PF05191 Adenylate kinase, active site lid SRIM_RS18625 PF00344 SecY translocase SRIM_RS18630 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SRIM_RS18635 PF00327 Ribosomal protein L30p/L7e SRIM_RS18640 PF03719 Ribosomal protein S5, C-terminal domain SRIM_RS18640 PF00333 Ribosomal protein S5, N-terminal domain SRIM_RS18645 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SRIM_RS18650 PF00347 Ribosomal protein L6 SRIM_RS18655 PF00410 Ribosomal protein S8 SRIM_RS18660 PF00253 Ribosomal protein S14p/S29e SRIM_RS18665 PF00673 ribosomal L5P family C-terminus SRIM_RS18665 PF00281 Ribosomal protein L5 SRIM_RS18670 PF00467 KOW motif SRIM_RS18670 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SRIM_RS18675 PF00238 Ribosomal protein L14p/L23e SRIM_RS18680 PF00366 Ribosomal protein S17 SRIM_RS18685 PF00831 Ribosomal L29 protein SRIM_RS18690 PF00252 Ribosomal protein L16p/L10e SRIM_RS18695 PF07650 KH domain SRIM_RS18695 PF00189 Ribosomal protein S3, C-terminal domain SRIM_RS18700 PF00237 Ribosomal protein L22p/L17e SRIM_RS18705 PF00203 Ribosomal protein S19 SRIM_RS18710 PF00181 Ribosomal Proteins L2, RNA binding domain SRIM_RS18710 PF03947 Ribosomal Proteins L2, C-terminal domain SRIM_RS18715 PF00276 Ribosomal protein L23 SRIM_RS18720 PF00573 Ribosomal protein L4/L1 family SRIM_RS18725 PF00297 Ribosomal protein L3 SRIM_RS18730 PF00338 Ribosomal protein S10p/S20e SRIM_RS18755 PF02261 Aspartate decarboxylase SRIM_RS18760 PF03143 Elongation factor Tu C-terminal domain SRIM_RS18760 PF00009 Elongation factor Tu GTP binding domain SRIM_RS18760 PF03144 Elongation factor Tu domain 2 SRIM_RS18765 PF03144 Elongation factor Tu domain 2 SRIM_RS18765 PF00679 Elongation factor G C-terminus SRIM_RS18765 PF14492 Elongation Factor G, domain II SRIM_RS18765 PF03764 Elongation factor G, domain IV SRIM_RS18765 PF00009 Elongation factor Tu GTP binding domain SRIM_RS18770 PF00177 Ribosomal protein S7p/S5e SRIM_RS18775 PF00164 Ribosomal protein S12/S23 SRIM_RS18785 PF05000 RNA polymerase Rpb1, domain 4 SRIM_RS18785 PF04997 RNA polymerase Rpb1, domain 1 SRIM_RS18785 PF04998 RNA polymerase Rpb1, domain 5 SRIM_RS18785 PF04983 RNA polymerase Rpb1, domain 3 SRIM_RS18785 PF00623 RNA polymerase Rpb1, domain 2 SRIM_RS18790 PF04563 RNA polymerase beta subunit SRIM_RS18790 PF04561 RNA polymerase Rpb2, domain 2 SRIM_RS18790 PF04565 RNA polymerase Rpb2, domain 3 SRIM_RS18790 PF10385 RNA polymerase beta subunit external 1 domain SRIM_RS18790 PF00562 RNA polymerase Rpb2, domain 6 SRIM_RS18790 PF04560 RNA polymerase Rpb2, domain 7 SRIM_RS18795 PF16320 Ribosomal protein L7/L12 dimerisation domain SRIM_RS18795 PF00542 Ribosomal protein L7/L12 C-terminal domain SRIM_RS18800 PF00466 Ribosomal protein L10 SRIM_RS18810 PF00687 Ribosomal protein L1p/L10e family SRIM_RS18815 PF00298 Ribosomal protein L11, RNA binding domain SRIM_RS18815 PF03946 Ribosomal protein L11, N-terminal domain SRIM_RS18820 PF02357 Transcription termination factor nusG SRIM_RS18825 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SRIM_RS18835 PF00155 Aminotransferase class I and II SRIM_RS18840 PF00962 Adenosine/AMP deaminase SRIM_RS18845 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SRIM_RS18845 PF01565 FAD binding domain SRIM_RS18855 PF13452 N-terminal half of MaoC dehydratase SRIM_RS18860 PF00471 Ribosomal protein L33 SRIM_RS18880 PF13460 NAD(P)H-binding SRIM_RS18890 PF04461 Protein of unknown function (DUF520) SRIM_RS18900 PF03733 Inner membrane component domain SRIM_RS18905 PF01435 Peptidase family M48 SRIM_RS18910 PF00361 Proton-conducting membrane transporter SRIM_RS18915 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus SRIM_RS18915 PF00361 Proton-conducting membrane transporter SRIM_RS18920 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus SRIM_RS18920 PF00361 Proton-conducting membrane transporter SRIM_RS18920 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SRIM_RS18925 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SRIM_RS18930 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SRIM_RS18935 PF00037 4Fe-4S binding domain SRIM_RS18940 PF00146 NADH dehydrogenase SRIM_RS18945 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SRIM_RS18950 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SRIM_RS18955 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 SRIM_RS18985 PF00072 Response regulator receiver domain SRIM_RS18985 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS18990 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SRIM_RS18990 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SRIM_RS18990 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SRIM_RS18995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SRIM_RS19000 PF00892 EamA-like transporter family SRIM_RS19005 PF01483 Proprotein convertase P-domain SRIM_RS19005 PF04389 Peptidase family M28 SRIM_RS19015 PF00005 ABC transporter SRIM_RS19025 PF00348 Polyprenyl synthetase SRIM_RS19030 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS19060 PF00361 Proton-conducting membrane transporter SRIM_RS19065 PF00361 Proton-conducting membrane transporter SRIM_RS19070 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SRIM_RS19070 PF00361 Proton-conducting membrane transporter SRIM_RS19075 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SRIM_RS19080 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SRIM_RS19085 PF12838 4Fe-4S dicluster domain SRIM_RS19090 PF00146 NADH dehydrogenase SRIM_RS19095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SRIM_RS19095 PF00384 Molybdopterin oxidoreductase SRIM_RS19095 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SRIM_RS19095 PF01568 Molydopterin dinucleotide binding domain SRIM_RS19100 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SRIM_RS19100 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SRIM_RS19100 PF10531 SLBB domain SRIM_RS19110 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SRIM_RS19115 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SRIM_RS19120 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SRIM_RS19125 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 SRIM_RS19130 PF00877 NlpC/P60 family SRIM_RS19150 PF01494 FAD binding domain SRIM_RS19160 PF01209 ubiE/COQ5 methyltransferase family SRIM_RS19175 PF04055 Radical SAM superfamily SRIM_RS19180 PF00069 Protein kinase domain SRIM_RS19180 PF00400 WD domain, G-beta repeat SRIM_RS19185 PF00756 Putative esterase SRIM_RS19190 PF02621 Menaquinone biosynthesis SRIM_RS19195 PF00313 'Cold-shock' DNA-binding domain SRIM_RS19210 PF00501 AMP-binding enzyme SRIM_RS19220 PF08362 YcdC-like protein, C-terminal region SRIM_RS19220 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS19225 PF00561 alpha/beta hydrolase fold SRIM_RS19235 PF00375 Sodium:dicarboxylate symporter family SRIM_RS19250 PF04055 Radical SAM superfamily SRIM_RS19265 PF02441 Flavoprotein SRIM_RS19270 PF01694 Rhomboid family SRIM_RS19280 PF01040 UbiA prenyltransferase family SRIM_RS19285 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SRIM_RS19300 PF03171 2OG-Fe(II) oxygenase superfamily SRIM_RS19300 PF14226 non-haem dioxygenase in morphine synthesis N-terminal SRIM_RS19330 PF01578 Cytochrome C assembly protein SRIM_RS19335 PF05140 ResB-like family SRIM_RS19340 PF02683 Cytochrome C biogenesis protein transmembrane region SRIM_RS19355 PF00300 Histidine phosphatase superfamily (branch 1) SRIM_RS19360 PF00202 Aminotransferase class-III SRIM_RS19370 PF11954 Domain of unknown function (DUF3471) SRIM_RS19370 PF00144 Beta-lactamase SRIM_RS19400 PF01494 FAD binding domain SRIM_RS19410 PF02694 Uncharacterised BCR, YnfA/UPF0060 family SRIM_RS19415 PF00106 short chain dehydrogenase SRIM_RS19430 PF01139 tRNA-splicing ligase RtcB SRIM_RS19480 PF03633 Glycosyl hydrolase family 65, C-terminal domain SRIM_RS19480 PF03632 Glycosyl hydrolase family 65 central catalytic domain SRIM_RS19480 PF03636 Glycosyl hydrolase family 65, N-terminal domain SRIM_RS19485 PF13419 Haloacid dehalogenase-like hydrolase SRIM_RS19495 PF01921 tRNA synthetases class I (K) SRIM_RS19500 PF03485 Arginyl tRNA synthetase N terminal domain SRIM_RS19500 PF05746 DALR anticodon binding domain SRIM_RS19500 PF00750 tRNA synthetases class I (R) SRIM_RS19525 PF07690 Major Facilitator Superfamily SRIM_RS19550 PF00089 Trypsin SRIM_RS19555 PF00089 Trypsin SRIM_RS19560 PF00490 Delta-aminolevulinic acid dehydratase SRIM_RS19565 PF14824 Sirohaem biosynthesis protein central SRIM_RS19565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SRIM_RS19565 PF10414 Sirohaem synthase dimerisation region SRIM_RS19570 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SRIM_RS19570 PF03900 Porphobilinogen deaminase, C-terminal domain SRIM_RS19575 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SRIM_RS19575 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SRIM_RS19575 PF01488 Shikimate / quinate 5-dehydrogenase SRIM_RS19580 PF02629 CoA binding domain SRIM_RS19580 PF06971 Putative DNA-binding protein N-terminus SRIM_RS19600 PF04542 Sigma-70 region 2 SRIM_RS19600 PF08281 Sigma-70, region 4 SRIM_RS19610 PF01553 Acyltransferase SRIM_RS19615 PF01370 NAD dependent epimerase/dehydratase family SRIM_RS19625 PF12728 Helix-turn-helix domain SRIM_RS19635 PF00850 Histone deacetylase domain SRIM_RS19640 PF13419 Haloacid dehalogenase-like hydrolase SRIM_RS19670 PF13466 STAS domain SRIM_RS19670 PF07228 Stage II sporulation protein E (SpoIIE) SRIM_RS19670 PF08448 PAS fold SRIM_RS19670 PF13581 Histidine kinase-like ATPase domain SRIM_RS19675 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SRIM_RS19675 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SRIM_RS19675 PF18267 Rubredoxin NAD+ reductase C-terminal domain SRIM_RS19675 PF04324 BFD-like [2Fe-2S] binding domain SRIM_RS19675 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS19700 PF01266 FAD dependent oxidoreductase SRIM_RS19705 PF02390 Putative methyltransferase SRIM_RS19740 PF00248 Aldo/keto reductase family SRIM_RS19745 PF07690 Major Facilitator Superfamily SRIM_RS19820 PF02698 DUF218 domain SRIM_RS19845 PF12307 Protein of unknown function (DUF3631) SRIM_RS19870 PF00270 DEAD/DEAH box helicase SRIM_RS19870 PF00271 Helicase conserved C-terminal domain SRIM_RS19905 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold SRIM_RS19905 PF00271 Helicase conserved C-terminal domain SRIM_RS19905 PF04408 Helicase associated domain (HA2) SRIM_RS19905 PF11898 Domain of unknown function (DUF3418) SRIM_RS19905 PF00270 DEAD/DEAH box helicase SRIM_RS19930 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SRIM_RS19930 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SRIM_RS19940 PF00586 AIR synthase related protein, N-terminal domain SRIM_RS19940 PF02769 AIR synthase related protein, C-terminal domain SRIM_RS19945 PF00156 Phosphoribosyl transferase domain SRIM_RS19960 PF07690 Major Facilitator Superfamily SRIM_RS19965 PF02769 AIR synthase related protein, C-terminal domain SRIM_RS19965 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SRIM_RS19965 PF00586 AIR synthase related protein, N-terminal domain SRIM_RS19975 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase SRIM_RS20000 PF13732 Domain of unknown function (DUF4162) SRIM_RS20000 PF00005 ABC transporter SRIM_RS20010 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term SRIM_RS20010 PF00672 HAMP domain SRIM_RS20010 PF07730 Histidine kinase SRIM_RS20010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS20015 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS20015 PF00072 Response regulator receiver domain SRIM_RS20025 PF01259 SAICAR synthetase SRIM_RS20030 PF07690 Major Facilitator Superfamily SRIM_RS20035 PF03466 LysR substrate binding domain SRIM_RS20035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS20050 PF02843 Phosphoribosylglycinamide synthetase, C domain SRIM_RS20050 PF02844 Phosphoribosylglycinamide synthetase, N domain SRIM_RS20050 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SRIM_RS20065 PF07729 FCD domain SRIM_RS20065 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS20070 PF00202 Aminotransferase class-III SRIM_RS20080 PF01965 DJ-1/PfpI family SRIM_RS20090 PF00400 WD domain, G-beta repeat SRIM_RS20090 PF00069 Protein kinase domain SRIM_RS20100 PF18766 SWI2/SNF2 ATPase SRIM_RS20100 PF11867 Domain of unknown function (DUF3387) SRIM_RS20100 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SRIM_RS20120 PF01420 Type I restriction modification DNA specificity domain SRIM_RS20125 PF02384 N-6 DNA Methylase SRIM_RS20140 PF00709 Adenylosuccinate synthetase SRIM_RS20155 PF00005 ABC transporter SRIM_RS20155 PF13732 Domain of unknown function (DUF4162) SRIM_RS20175 PF00072 Response regulator receiver domain SRIM_RS20175 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS20180 PF07730 Histidine kinase SRIM_RS20185 PF07859 alpha/beta hydrolase fold SRIM_RS20190 PF00266 Aminotransferase class-V SRIM_RS20195 PF03301 Tryptophan 2,3-dioxygenase SRIM_RS20205 PF01116 Fructose-bisphosphate aldolase class-II SRIM_RS20210 PF00156 Phosphoribosyl transferase domain SRIM_RS20240 PF00155 Aminotransferase class I and II SRIM_RS20260 PF02861 Clp amino terminal domain, pathogenicity island component SRIM_RS20260 PF10431 C-terminal, D2-small domain, of ClpB protein SRIM_RS20260 PF07724 AAA domain (Cdc48 subfamily) SRIM_RS20260 PF00004 ATPase family associated with various cellular activities (AAA) SRIM_RS20260 PF17871 AAA lid domain SRIM_RS20280 PF13411 MerR HTH family regulatory protein SRIM_RS20285 PF00226 DnaJ domain SRIM_RS20285 PF01556 DnaJ C terminal domain SRIM_RS20285 PF00684 DnaJ central domain SRIM_RS20290 PF01025 GrpE SRIM_RS20295 PF00012 Hsp70 protein SRIM_RS20300 PF02754 Cysteine-rich domain SRIM_RS20300 PF13183 4Fe-4S dicluster domain SRIM_RS20315 PF12833 Helix-turn-helix domain SRIM_RS20315 PF14525 AraC-binding-like domain SRIM_RS20335 PF00692 dUTPase SRIM_RS20350 PF14659 Phage integrase, N-terminal SAM-like domain SRIM_RS20350 PF00589 Phage integrase family SRIM_RS20380 PF01580 FtsK/SpoIIIE family SRIM_RS20390 PF05729 NACHT domain SRIM_RS20390 PF00805 Pentapeptide repeats (8 copies) SRIM_RS20390 PF00400 WD domain, G-beta repeat SRIM_RS20395 PF13305 Tetracyclin repressor-like, C-terminal domain SRIM_RS20395 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS20415 PF00550 Phosphopantetheine attachment site SRIM_RS20415 PF14765 Polyketide synthase dehydratase SRIM_RS20415 PF08659 KR domain SRIM_RS20415 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS20415 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS20415 PF00698 Acyl transferase domain SRIM_RS20415 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS20430 PF00376 MerR family regulatory protein SRIM_RS20430 PF09278 MerR, DNA binding SRIM_RS20440 PF00768 D-alanyl-D-alanine carboxypeptidase SRIM_RS20445 PF06480 FtsH Extracellular SRIM_RS20445 PF17862 AAA+ lid domain SRIM_RS20445 PF01434 Peptidase family M41 SRIM_RS20445 PF00004 ATPase family associated with various cellular activities (AAA) SRIM_RS20455 PF03704 Bacterial transcriptional activator domain SRIM_RS20455 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS20465 PF13732 Domain of unknown function (DUF4162) SRIM_RS20465 PF00005 ABC transporter SRIM_RS20470 PF03621 MbtH-like protein SRIM_RS20475 PF00975 Thioesterase domain SRIM_RS20475 PF00668 Condensation domain SRIM_RS20475 PF00501 AMP-binding enzyme SRIM_RS20475 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS20475 PF00550 Phosphopantetheine attachment site SRIM_RS20480 PF00501 AMP-binding enzyme SRIM_RS20480 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS20480 PF00550 Phosphopantetheine attachment site SRIM_RS20480 PF00668 Condensation domain SRIM_RS20485 PF00291 Pyridoxal-phosphate dependent enzyme SRIM_RS20490 PF02423 Ornithine cyclodeaminase/mu-crystallin family SRIM_RS20495 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS20495 PF00072 Response regulator receiver domain SRIM_RS20510 PF00550 Phosphopantetheine attachment site SRIM_RS20515 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SRIM_RS20515 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SRIM_RS20525 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SRIM_RS20525 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SRIM_RS20540 PF00583 Acetyltransferase (GNAT) family SRIM_RS20545 PF07690 Major Facilitator Superfamily SRIM_RS20555 PF00245 Alkaline phosphatase SRIM_RS20565 PF02342 TerD domain SRIM_RS20585 PF03816 Cell envelope-related transcriptional attenuator domain SRIM_RS20590 PF02514 CobN/Magnesium Chelatase SRIM_RS20600 PF02570 Precorrin-8X methylmutase SRIM_RS20605 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SRIM_RS20630 PF02571 Precorrin-6x reductase CbiJ/CobK SRIM_RS20635 PF01888 CbiD SRIM_RS20640 PF00857 Isochorismatase family SRIM_RS20645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SRIM_RS20650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SRIM_RS20660 PF01545 Cation efflux family SRIM_RS20660 PF16916 Dimerisation domain of Zinc Transporter SRIM_RS20665 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS20665 PF00107 Zinc-binding dehydrogenase SRIM_RS20675 PF00005 ABC transporter SRIM_RS20675 PF00571 CBS domain SRIM_RS20685 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS20690 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS20705 PF00575 S1 RNA binding domain SRIM_RS20710 PF07690 Major Facilitator Superfamily SRIM_RS20715 PF08241 Methyltransferase domain SRIM_RS20720 PF09334 tRNA synthetases class I (M) SRIM_RS20735 PF02938 GAD domain SRIM_RS20735 PF00152 tRNA synthetases class II (D, K and N) SRIM_RS20735 PF01336 OB-fold nucleic acid binding domain SRIM_RS20745 PF01594 AI-2E family transporter SRIM_RS20750 PF02678 Pirin SRIM_RS20750 PF05726 Pirin C-terminal cupin domain SRIM_RS20765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS20765 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS20765 PF12806 Acetyl-CoA dehydrogenase C-terminal like SRIM_RS20765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS20770 PF02127 Aminopeptidase I zinc metalloprotease (M18) SRIM_RS20775 PF00931 NB-ARC domain SRIM_RS20775 PF03704 Bacterial transcriptional activator domain SRIM_RS20775 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS20825 PF00578 AhpC/TSA family SRIM_RS20825 PF02683 Cytochrome C biogenesis protein transmembrane region SRIM_RS20825 PF17991 Thioredoxin like C-terminal domain SRIM_RS20840 PF00795 Carbon-nitrogen hydrolase SRIM_RS20850 PF07690 Major Facilitator Superfamily SRIM_RS20855 PF07729 FCD domain SRIM_RS20855 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS20865 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SRIM_RS20865 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SRIM_RS20865 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SRIM_RS20880 PF07690 Major Facilitator Superfamily SRIM_RS20885 PF01494 FAD binding domain SRIM_RS20925 PF00293 NUDIX domain SRIM_RS20935 PF02817 e3 binding domain SRIM_RS20935 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SRIM_RS20935 PF00364 Biotin-requiring enzyme SRIM_RS20940 PF02779 Transketolase, pyrimidine binding domain SRIM_RS20940 PF02780 Transketolase, C-terminal domain SRIM_RS20945 PF00676 Dehydrogenase E1 component SRIM_RS20950 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS20950 PF00072 Response regulator receiver domain SRIM_RS20960 PF01636 Phosphotransferase enzyme family SRIM_RS20965 PF00069 Protein kinase domain SRIM_RS20965 PF03793 PASTA domain SRIM_RS20970 PF00069 Protein kinase domain SRIM_RS20970 PF03793 PASTA domain SRIM_RS20975 PF10759 Protein of unknown function (DUF2587) SRIM_RS20985 PF00550 Phosphopantetheine attachment site SRIM_RS20985 PF14765 Polyketide synthase dehydratase SRIM_RS20985 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS20985 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS20985 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS20985 PF00698 Acyl transferase domain SRIM_RS20985 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS20985 PF08659 KR domain SRIM_RS20990 PF07885 Ion channel SRIM_RS20990 PF02254 TrkA-N domain SRIM_RS20995 PF00994 Probable molybdopterin binding domain SRIM_RS20995 PF03454 MoeA C-terminal region (domain IV) SRIM_RS20995 PF03453 MoeA N-terminal region (domain I and II) SRIM_RS21000 PF12804 MobA-like NTP transferase domain SRIM_RS21005 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SRIM_RS21005 PF00364 Biotin-requiring enzyme SRIM_RS21005 PF02817 e3 binding domain SRIM_RS21010 PF02779 Transketolase, pyrimidine binding domain SRIM_RS21010 PF02780 Transketolase, C-terminal domain SRIM_RS21015 PF00676 Dehydrogenase E1 component SRIM_RS21020 PF01037 Lrp/AsnC ligand binding domain SRIM_RS21020 PF13404 AsnC-type helix-turn-helix domain SRIM_RS21025 PF17932 Tetracyclin repressor-like, C-terminal domain SRIM_RS21025 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS21030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SRIM_RS21030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SRIM_RS21030 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain SRIM_RS21055 PF05138 Phenylacetic acid catabolic protein SRIM_RS21060 PF06243 Phenylacetic acid degradation B SRIM_RS21065 PF05138 Phenylacetic acid catabolic protein SRIM_RS21070 PF01883 Iron-sulfur cluster assembly protein SRIM_RS21075 PF00175 Oxidoreductase NAD-binding domain SRIM_RS21075 PF00111 2Fe-2S iron-sulfur cluster binding domain SRIM_RS21075 PF00970 Oxidoreductase FAD-binding domain SRIM_RS21085 PF00581 Rhodanese-like domain SRIM_RS21110 PF01638 HxlR-like helix-turn-helix SRIM_RS21115 PF02525 Flavodoxin-like fold SRIM_RS21120 PF00072 Response regulator receiver domain SRIM_RS21120 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS21125 PF07730 Histidine kinase SRIM_RS21130 PF07690 Major Facilitator Superfamily SRIM_RS21135 PF03466 LysR substrate binding domain SRIM_RS21135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS21145 PF00498 FHA domain SRIM_RS21145 PF12401 Protein of unknown function (DUF2662) SRIM_RS21150 PF16697 Inner membrane component of T3SS, cytoplasmic domain SRIM_RS21160 PF01098 Cell cycle protein SRIM_RS21165 PF00905 Penicillin binding protein transpeptidase domain SRIM_RS21170 PF00069 Protein kinase domain SRIM_RS21170 PF03793 PASTA domain SRIM_RS21175 PF04203 Sortase domain SRIM_RS21180 PF04203 Sortase domain SRIM_RS21185 PF00117 Glutamine amidotransferase class-I SRIM_RS21195 PF04203 Sortase domain SRIM_RS21205 PF06781 Cell division protein CrgA SRIM_RS21210 PF01694 Rhomboid family SRIM_RS21215 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SRIM_RS21220 PF17258 Family of unknown function (DUF5324) SRIM_RS21235 PF00069 Protein kinase domain SRIM_RS21255 PF12089 Transmembrane domain of unknown function (DUF3566) SRIM_RS21260 PF03989 DNA gyrase C-terminal domain, beta-propeller SRIM_RS21260 PF00521 DNA gyrase/topoisomerase IV, subunit A SRIM_RS21265 PF00204 DNA gyrase B SRIM_RS21265 PF00986 DNA gyrase B subunit, carboxyl terminus SRIM_RS21265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS21265 PF01751 Toprim domain SRIM_RS21270 PF05258 Dna[CI] antecedent, DciA SRIM_RS21275 PF02463 RecF/RecN/SMC N terminal domain SRIM_RS21280 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SRIM_RS21280 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SRIM_RS21285 PF00712 DNA polymerase III beta subunit, N-terminal domain SRIM_RS21285 PF02768 DNA polymerase III beta subunit, C-terminal domain SRIM_RS21285 PF02767 DNA polymerase III beta subunit, central domain SRIM_RS21290 PF08299 Bacterial dnaA protein helix-turn-helix SRIM_RS21290 PF00308 Bacterial dnaA protein SRIM_RS21295 PF00468 Ribosomal protein L34 SRIM_RS21300 PF00825 Ribonuclease P SRIM_RS21305 PF01809 Putative membrane protein insertion efficiency factor SRIM_RS21310 PF02096 60Kd inner membrane protein SRIM_RS21320 PF02527 rRNA small subunit methyltransferase G SRIM_RS21325 PF13614 AAA domain SRIM_RS21330 PF17762 HTH domain found in ParB protein SRIM_RS21330 PF02195 ParB-like nuclease domain SRIM_RS21340 PF00085 Thioredoxin SRIM_RS21345 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS21355 PF08281 Sigma-70, region 4 SRIM_RS21355 PF04542 Sigma-70 region 2 SRIM_RS21365 PF03793 PASTA domain SRIM_RS21365 PF00069 Protein kinase domain SRIM_RS21370 PF03023 Lipid II flippase MurJ SRIM_RS21380 PF01743 Poly A polymerase head domain SRIM_RS21380 PF12627 Probable RNA and SrmB- binding site of polymerase A SRIM_RS21380 PF13735 tRNA nucleotidyltransferase domain 2 putative SRIM_RS21390 PF07690 Major Facilitator Superfamily SRIM_RS21395 PF01658 Myo-inositol-1-phosphate synthase SRIM_RS21400 PF03551 Transcriptional regulator PadR-like family SRIM_RS21400 PF10400 Virulence activator alpha C-term SRIM_RS21405 PF00905 Penicillin binding protein transpeptidase domain SRIM_RS21405 PF00912 Transglycosylase SRIM_RS21430 PF01250 Ribosomal protein S6 SRIM_RS21435 PF00436 Single-strand binding protein family SRIM_RS21440 PF01084 Ribosomal protein S18 SRIM_RS21445 PF01281 Ribosomal protein L9, N-terminal domain SRIM_RS21445 PF03948 Ribosomal protein L9, C-terminal domain SRIM_RS21455 PF01554 MatE SRIM_RS21460 PF00772 DnaB-like helicase N terminal domain SRIM_RS21460 PF03796 DnaB-like helicase C terminal domain SRIM_RS21465 PF01494 FAD binding domain SRIM_RS21470 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS21470 PF00107 Zinc-binding dehydrogenase SRIM_RS21475 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS21480 PF01327 Polypeptide deformylase SRIM_RS21505 PF06445 GyrI-like small molecule binding domain SRIM_RS21505 PF13411 MerR HTH family regulatory protein SRIM_RS21520 PF00144 Beta-lactamase SRIM_RS21525 PF00266 Aminotransferase class-V SRIM_RS21540 PF01047 MarR family SRIM_RS21545 PF07690 Major Facilitator Superfamily SRIM_RS21565 PF00970 Oxidoreductase FAD-binding domain SRIM_RS21565 PF00111 2Fe-2S iron-sulfur cluster binding domain SRIM_RS21565 PF00175 Oxidoreductase NAD-binding domain SRIM_RS21575 PF00293 NUDIX domain SRIM_RS21580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS21580 PF03466 LysR substrate binding domain SRIM_RS21585 PF01053 Cys/Met metabolism PLP-dependent enzyme SRIM_RS21590 PF01451 Low molecular weight phosphotyrosine protein phosphatase SRIM_RS21595 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV SRIM_RS21600 PF07883 Cupin domain SRIM_RS21615 PF04686 Streptomyces sporulation and cell division protein, SsgA SRIM_RS21625 PF13667 ThiC-associated domain SRIM_RS21625 PF01964 Radical SAM ThiC family SRIM_RS21645 PF00149 Calcineurin-like phosphoesterase SRIM_RS21650 PF00356 Bacterial regulatory proteins, lacI family SRIM_RS21650 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SRIM_RS21655 PF00155 Aminotransferase class I and II SRIM_RS21665 PF01654 Cytochrome bd terminal oxidase subunit I SRIM_RS21670 PF02322 Cytochrome bd terminal oxidase subunit II SRIM_RS21675 PF00005 ABC transporter SRIM_RS21675 PF00664 ABC transporter transmembrane region SRIM_RS21680 PF07730 Histidine kinase SRIM_RS21680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS21680 PF13185 GAF domain SRIM_RS21680 PF13492 GAF domain SRIM_RS21685 PF01551 Peptidase family M23 SRIM_RS21685 PF08525 Opacity-associated protein A N-terminal motif SRIM_RS21685 PF01476 LysM domain SRIM_RS21695 PF00296 Luciferase-like monooxygenase SRIM_RS21700 PF01435 Peptidase family M48 SRIM_RS21725 PF03055 Retinal pigment epithelial membrane protein SRIM_RS21740 PF13411 MerR HTH family regulatory protein SRIM_RS21750 PF00561 alpha/beta hydrolase fold SRIM_RS21750 PF00106 short chain dehydrogenase SRIM_RS21760 PF00005 ABC transporter SRIM_RS21760 PF13732 Domain of unknown function (DUF4162) SRIM_RS21770 PF00005 ABC transporter SRIM_RS21800 PF13411 MerR HTH family regulatory protein SRIM_RS21805 PF04075 F420H(2)-dependent quinone reductase SRIM_RS21810 PF07690 Major Facilitator Superfamily SRIM_RS21815 PF07729 FCD domain SRIM_RS21815 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS21820 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SRIM_RS21820 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SRIM_RS21830 PF07739 TipAS antibiotic-recognition domain SRIM_RS21830 PF13411 MerR HTH family regulatory protein SRIM_RS21840 PF07690 Major Facilitator Superfamily SRIM_RS21865 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SRIM_RS21865 PF02403 Seryl-tRNA synthetase N-terminal domain SRIM_RS21870 PF00800 Prephenate dehydratase SRIM_RS21870 PF01842 ACT domain SRIM_RS21875 PF04261 Dyp-type peroxidase family SRIM_RS21880 PF04234 CopC domain SRIM_RS21890 PF02630 SCO1/SenC SRIM_RS21915 PF05195 Aminopeptidase P, N-terminal domain SRIM_RS21915 PF00557 Metallopeptidase family M24 SRIM_RS21940 PF02810 SEC-C motif SRIM_RS21940 PF07517 SecA DEAD-like domain SRIM_RS21940 PF01043 SecA preprotein cross-linking domain SRIM_RS21940 PF07516 SecA Wing and Scaffold domain SRIM_RS21950 PF03009 Glycerophosphoryl diester phosphodiesterase family SRIM_RS21955 PF13180 PDZ domain SRIM_RS21975 PF12307 Protein of unknown function (DUF3631) SRIM_RS22005 PF00436 Single-strand binding protein family SRIM_RS22070 PF00990 Diguanylate cyclase, GGDEF domain SRIM_RS22090 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS22090 PF07702 UTRA domain SRIM_RS22095 PF02441 Flavoprotein SRIM_RS22095 PF04127 DNA / pantothenate metabolism flavoprotein SRIM_RS22115 PF00931 NB-ARC domain SRIM_RS22115 PF13176 Tetratricopeptide repeat SRIM_RS22150 PF08281 Sigma-70, region 4 SRIM_RS22150 PF04542 Sigma-70 region 2 SRIM_RS22205 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS22205 PF00501 AMP-binding enzyme SRIM_RS22245 PF02525 Flavodoxin-like fold SRIM_RS22250 PF01965 DJ-1/PfpI family SRIM_RS22250 PF12833 Helix-turn-helix domain SRIM_RS22265 PF03358 NADPH-dependent FMN reductase SRIM_RS22270 PF00072 Response regulator receiver domain SRIM_RS22270 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS22275 PF00672 HAMP domain SRIM_RS22275 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS22275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS22285 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase SRIM_RS22290 PF07690 Major Facilitator Superfamily SRIM_RS22300 PF03777 ChpA-C SRIM_RS22310 PF07690 Major Facilitator Superfamily SRIM_RS22315 PF01047 MarR family SRIM_RS22335 PF02909 Tetracyclin repressor-like, C-terminal domain SRIM_RS22335 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS22340 PF01494 FAD binding domain SRIM_RS22360 PF07702 UTRA domain SRIM_RS22360 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS22370 PF13936 Helix-turn-helix domain SRIM_RS22390 PF00132 Bacterial transferase hexapeptide (six repeats) SRIM_RS22425 PF08281 Sigma-70, region 4 SRIM_RS22425 PF04542 Sigma-70 region 2 SRIM_RS22425 PF12680 SnoaL-like domain SRIM_RS22430 PF03466 LysR substrate binding domain SRIM_RS22430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS22455 PF04542 Sigma-70 region 2 SRIM_RS22455 PF04545 Sigma-70, region 4 SRIM_RS22455 PF04539 Sigma-70 region 3 SRIM_RS22460 PF04542 Sigma-70 region 2 SRIM_RS22460 PF04539 Sigma-70 region 3 SRIM_RS22460 PF04545 Sigma-70, region 4 SRIM_RS22465 PF07876 Stress responsive A/B Barrel Domain SRIM_RS22475 PF01022 Bacterial regulatory protein, arsR family SRIM_RS22480 PF00690 Cation transporter/ATPase, N-terminus SRIM_RS22480 PF00689 Cation transporting ATPase, C-terminus SRIM_RS22495 PF09900 Predicted membrane protein (DUF2127) SRIM_RS22505 PF05726 Pirin C-terminal cupin domain SRIM_RS22505 PF02678 Pirin SRIM_RS22510 PF12833 Helix-turn-helix domain SRIM_RS22515 PF07859 alpha/beta hydrolase fold SRIM_RS22525 PF14437 MafB19-like deaminase SRIM_RS22575 PF02492 CobW/HypB/UreG, nucleotide-binding domain SRIM_RS22575 PF07683 Cobalamin synthesis protein cobW C-terminal domain SRIM_RS22580 PF01783 Ribosomal L32p protein family SRIM_RS22595 PF01425 Amidase SRIM_RS22610 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin SRIM_RS22615 PF00480 ROK family SRIM_RS22625 PF00291 Pyridoxal-phosphate dependent enzyme SRIM_RS22635 PF00732 GMC oxidoreductase SRIM_RS22635 PF05199 GMC oxidoreductase SRIM_RS22645 PF00202 Aminotransferase class-III SRIM_RS22650 PF01593 Flavin containing amine oxidoreductase SRIM_RS22655 PF00535 Glycosyl transferase family 2 SRIM_RS22660 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SRIM_RS22665 PF13530 Sterol carrier protein domain SRIM_RS22665 PF17668 Acetyltransferase (GNAT) domain SRIM_RS22675 PF02342 TerD domain SRIM_RS22680 PF12848 ABC transporter SRIM_RS22680 PF00005 ABC transporter SRIM_RS22695 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS22705 PF00356 Bacterial regulatory proteins, lacI family SRIM_RS22705 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SRIM_RS22710 PF00795 Carbon-nitrogen hydrolase SRIM_RS22715 PF02272 DHHA1 domain SRIM_RS22715 PF01411 tRNA synthetases class II (A) SRIM_RS22715 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SRIM_RS22720 PF00814 Glycoprotease family SRIM_RS22750 PF01979 Amidohydrolase family SRIM_RS22760 PF00005 ABC transporter SRIM_RS22770 PF04542 Sigma-70 region 2 SRIM_RS22770 PF08281 Sigma-70, region 4 SRIM_RS22775 PF02525 Flavodoxin-like fold SRIM_RS22805 PF12169 DNA polymerase III subunits gamma and tau domain III SRIM_RS22810 PF02575 YbaB/EbfC DNA-binding family SRIM_RS22815 PF02132 RecR protein SRIM_RS22815 PF00633 Helix-hairpin-helix motif SRIM_RS22815 PF13662 Toprim domain SRIM_RS22825 PF01842 ACT domain SRIM_RS22825 PF13840 ACT domain SRIM_RS22825 PF00696 Amino acid kinase family SRIM_RS22830 PF02774 Semialdehyde dehydrogenase, dimerisation domain SRIM_RS22830 PF01118 Semialdehyde dehydrogenase, NAD binding domain SRIM_RS22835 PF08281 Sigma-70, region 4 SRIM_RS22835 PF04542 Sigma-70 region 2 SRIM_RS22850 PF00805 Pentapeptide repeats (8 copies) SRIM_RS22855 PF00326 Prolyl oligopeptidase family SRIM_RS22870 PF00875 DNA photolyase SRIM_RS22870 PF03441 FAD binding domain of DNA photolyase SRIM_RS22885 PF01593 Flavin containing amine oxidoreductase SRIM_RS22895 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS22895 PF00072 Response regulator receiver domain SRIM_RS22930 PF00171 Aldehyde dehydrogenase family SRIM_RS22935 PF00205 Thiamine pyrophosphate enzyme, central domain SRIM_RS22935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SRIM_RS22935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SRIM_RS22950 PF00067 Cytochrome P450 SRIM_RS22955 PF00550 Phosphopantetheine attachment site SRIM_RS22965 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS22965 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS22970 PF00069 Protein kinase domain SRIM_RS22985 PF00491 Arginase family SRIM_RS22990 PF13452 N-terminal half of MaoC dehydratase SRIM_RS22995 PF00501 AMP-binding enzyme SRIM_RS22995 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS23000 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS23000 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS23010 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase SRIM_RS23070 PF10518 TAT (twin-arginine translocation) pathway signal sequence SRIM_RS23070 PF00149 Calcineurin-like phosphoesterase SRIM_RS23080 PF00905 Penicillin binding protein transpeptidase domain SRIM_RS23080 PF00912 Transglycosylase SRIM_RS23090 PF02374 Anion-transporting ATPase SRIM_RS23090 PF17886 HSP20-like domain found in ArsA SRIM_RS23095 PF02374 Anion-transporting ATPase SRIM_RS23115 PF00753 Metallo-beta-lactamase superfamily SRIM_RS23115 PF16123 Hydroxyacylglutathione hydrolase C-terminus SRIM_RS23125 PF04371 Porphyromonas-type peptidyl-arginine deiminase SRIM_RS23130 PF00027 Cyclic nucleotide-binding domain SRIM_RS23130 PF13545 Crp-like helix-turn-helix domain SRIM_RS23135 PF10576 Iron-sulfur binding domain of endonuclease III SRIM_RS23135 PF00633 Helix-hairpin-helix motif SRIM_RS23135 PF00730 HhH-GPD superfamily base excision DNA repair protein SRIM_RS23140 PF00293 NUDIX domain SRIM_RS23145 PF02674 Colicin V production protein SRIM_RS23150 PF00561 alpha/beta hydrolase fold SRIM_RS23160 PF06965 Na+/H+ antiporter 1 SRIM_RS23165 PF16177 Acetyl-coenzyme A synthetase N-terminus SRIM_RS23165 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS23165 PF00501 AMP-binding enzyme SRIM_RS23170 PF00484 Carbonic anhydrase SRIM_RS23180 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SRIM_RS23200 PF00437 Type II/IV secretion system protein SRIM_RS23230 PF07883 Cupin domain SRIM_RS23240 PF00270 DEAD/DEAH box helicase SRIM_RS23240 PF09369 Domain of unknown function (DUF1998) SRIM_RS23240 PF00271 Helicase conserved C-terminal domain SRIM_RS23245 PF01740 STAS domain SRIM_RS23255 PF03030 Inorganic H+ pyrophosphatase SRIM_RS23265 PF05175 Methyltransferase small domain SRIM_RS23265 PF17827 PrmC N-terminal domain SRIM_RS23285 PF01131 DNA topoisomerase SRIM_RS23285 PF13368 Topoisomerase C-terminal repeat SRIM_RS23285 PF01751 Toprim domain SRIM_RS23295 PF02223 Thymidylate kinase SRIM_RS23300 PF12169 DNA polymerase III subunits gamma and tau domain III SRIM_RS23305 PF00561 alpha/beta hydrolase fold SRIM_RS23315 PF01804 Penicillin amidase SRIM_RS23320 PF00005 ABC transporter SRIM_RS23320 PF00664 ABC transporter transmembrane region SRIM_RS23325 PF00501 AMP-binding enzyme SRIM_RS23325 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS23325 PF00550 Phosphopantetheine attachment site SRIM_RS23325 PF00668 Condensation domain SRIM_RS23330 PF00550 Phosphopantetheine attachment site SRIM_RS23330 PF00668 Condensation domain SRIM_RS23330 PF00501 AMP-binding enzyme SRIM_RS23330 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS23330 PF07993 Male sterility protein SRIM_RS23335 PF00975 Thioesterase domain SRIM_RS23335 PF00501 AMP-binding enzyme SRIM_RS23335 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS23335 PF00550 Phosphopantetheine attachment site SRIM_RS23335 PF00668 Condensation domain SRIM_RS23340 PF03621 MbtH-like protein SRIM_RS23345 PF00975 Thioesterase domain SRIM_RS23350 PF18125 RlmM ferredoxin-like domain SRIM_RS23350 PF01728 FtsJ-like methyltransferase SRIM_RS23360 PF03807 NADP oxidoreductase coenzyme F420-dependent SRIM_RS23360 PF14748 Pyrroline-5-carboxylate reductase dimerisation SRIM_RS23370 PF01425 Amidase SRIM_RS23385 PF03009 Glycerophosphoryl diester phosphodiesterase family SRIM_RS23390 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS23390 PF00072 Response regulator receiver domain SRIM_RS23405 PF00005 ABC transporter SRIM_RS23415 PF00797 N-acetyltransferase SRIM_RS23425 PF08220 DeoR-like helix-turn-helix domain SRIM_RS23425 PF00455 DeoR C terminal sensor domain SRIM_RS23435 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS23440 PF07859 alpha/beta hydrolase fold SRIM_RS23445 PF01612 3'-5' exonuclease SRIM_RS23445 PF00476 DNA polymerase family A SRIM_RS23445 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SRIM_RS23445 PF01367 5'-3' exonuclease, C-terminal SAM fold SRIM_RS23450 PF13443 Cro/C1-type HTH DNA-binding domain SRIM_RS23465 PF02540 NAD synthase SRIM_RS23465 PF00795 Carbon-nitrogen hydrolase SRIM_RS23475 PF00253 Ribosomal protein S14p/S29e SRIM_RS23480 PF00830 Ribosomal L28 family SRIM_RS23485 PF00471 Ribosomal protein L33 SRIM_RS23490 PF01197 Ribosomal protein L31 SRIM_RS23495 PF07683 Cobalamin synthesis protein cobW C-terminal domain SRIM_RS23495 PF02492 CobW/HypB/UreG, nucleotide-binding domain SRIM_RS23500 PF01084 Ribosomal protein S18 SRIM_RS23520 PF00171 Aldehyde dehydrogenase family SRIM_RS23525 PF04978 Protein of unknown function (DUF664) SRIM_RS23545 PF00282 Pyridoxal-dependent decarboxylase conserved domain SRIM_RS23550 PF03358 NADPH-dependent FMN reductase SRIM_RS23555 PF00891 O-methyltransferase domain SRIM_RS23585 PF01810 LysE type translocator SRIM_RS23590 PF07739 TipAS antibiotic-recognition domain SRIM_RS23590 PF13411 MerR HTH family regulatory protein SRIM_RS23595 PF01906 Putative heavy-metal-binding SRIM_RS23600 PF09335 SNARE associated Golgi protein SRIM_RS23610 PF00719 Inorganic pyrophosphatase SRIM_RS23615 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family SRIM_RS23625 PF01171 PP-loop family SRIM_RS23625 PF09179 TilS substrate binding domain SRIM_RS23630 PF00156 Phosphoribosyl transferase domain SRIM_RS23635 PF01434 Peptidase family M41 SRIM_RS23635 PF06480 FtsH Extracellular SRIM_RS23635 PF17862 AAA+ lid domain SRIM_RS23635 PF00004 ATPase family associated with various cellular activities (AAA) SRIM_RS23640 PF01227 GTP cyclohydrolase I SRIM_RS23650 PF16995 Transmembrane region of lysyl-tRNA synthetase SRIM_RS23650 PF09924 Uncharacterised conserved protein (DUF2156) SRIM_RS23650 PF01336 OB-fold nucleic acid binding domain SRIM_RS23650 PF00152 tRNA synthetases class II (D, K and N) SRIM_RS23665 PF02152 Dihydroneopterin aldolase SRIM_RS23670 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SRIM_RS23680 PF00005 ABC transporter SRIM_RS23680 PF00571 CBS domain SRIM_RS23685 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS23690 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS23695 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SRIM_RS23705 PF07690 Major Facilitator Superfamily SRIM_RS23710 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS23710 PF17754 MftR C-terminal domain SRIM_RS23720 PF13977 BetI-type transcriptional repressor, C-terminal SRIM_RS23720 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS23725 PF13302 Acetyltransferase (GNAT) domain SRIM_RS23735 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SRIM_RS23745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS23745 PF07730 Histidine kinase SRIM_RS23745 PF05384 Sensor protein DegS SRIM_RS23750 PF00072 Response regulator receiver domain SRIM_RS23750 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS23755 PF00891 O-methyltransferase domain SRIM_RS23765 PF01022 Bacterial regulatory protein, arsR family SRIM_RS23780 PF02569 Pantoate-beta-alanine ligase SRIM_RS23785 PF00890 FAD binding domain SRIM_RS23785 PF02910 Fumarate reductase flavoprotein C-term SRIM_RS23790 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SRIM_RS23790 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SRIM_RS23795 PF03309 Type III pantothenate kinase SRIM_RS23815 PF00583 Acetyltransferase (GNAT) family SRIM_RS23820 PF11774 Lsr2 SRIM_RS23830 PF17871 AAA lid domain SRIM_RS23830 PF02861 Clp amino terminal domain, pathogenicity island component SRIM_RS23830 PF07724 AAA domain (Cdc48 subfamily) SRIM_RS23830 PF10431 C-terminal, D2-small domain, of ClpB protein SRIM_RS23830 PF00004 ATPase family associated with various cellular activities (AAA) SRIM_RS23840 PF01551 Peptidase family M23 SRIM_RS23840 PF10145 Phage-related minor tail protein SRIM_RS23840 PF01464 Transglycosylase SLT domain SRIM_RS23845 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS23845 PF08361 MAATS-type transcriptional repressor, C-terminal region SRIM_RS23850 PF07690 Major Facilitator Superfamily SRIM_RS23855 PF12833 Helix-turn-helix domain SRIM_RS23855 PF00072 Response regulator receiver domain SRIM_RS23860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SRIM_RS23865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS23865 PF00672 HAMP domain SRIM_RS23865 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS23870 PF00072 Response regulator receiver domain SRIM_RS23870 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS23880 PF08281 Sigma-70, region 4 SRIM_RS23880 PF04542 Sigma-70 region 2 SRIM_RS23885 PF00633 Helix-hairpin-helix motif SRIM_RS23885 PF00730 HhH-GPD superfamily base excision DNA repair protein SRIM_RS23885 PF10576 Iron-sulfur binding domain of endonuclease III SRIM_RS23895 PF01569 PAP2 superfamily SRIM_RS23910 PF02457 DisA bacterial checkpoint controller nucleotide-binding SRIM_RS23910 PF10635 DisA bacterial checkpoint controller linker region SRIM_RS23910 PF12826 Helix-hairpin-helix motif SRIM_RS23915 PF18073 Rubredoxin metal binding domain SRIM_RS23930 PF02541 Ppx/GppA phosphatase family SRIM_RS23935 PF01261 Xylose isomerase-like TIM barrel SRIM_RS23945 PF00920 Dehydratase family SRIM_RS23950 PF00400 WD domain, G-beta repeat SRIM_RS23950 PF00069 Protein kinase domain SRIM_RS23975 PF08241 Methyltransferase domain SRIM_RS23980 PF11838 ERAP1-like C-terminal domain SRIM_RS23980 PF01433 Peptidase family M1 domain SRIM_RS23985 PF00916 Sulfate permease family SRIM_RS23985 PF01740 STAS domain SRIM_RS24005 PF14748 Pyrroline-5-carboxylate reductase dimerisation SRIM_RS24005 PF03807 NADP oxidoreductase coenzyme F420-dependent SRIM_RS24010 PF00579 tRNA synthetases class I (W and Y) SRIM_RS24090 PF00877 NlpC/P60 family SRIM_RS24095 PF01569 PAP2 superfamily SRIM_RS24105 PF01565 FAD binding domain SRIM_RS24105 PF08031 Berberine and berberine like SRIM_RS24125 PF02583 Metal-sensitive transcriptional repressor SRIM_RS24135 PF01384 Phosphate transporter family SRIM_RS24140 PF00005 ABC transporter SRIM_RS24145 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS24150 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS24155 PF12849 PBP superfamily domain SRIM_RS24160 PF00877 NlpC/P60 family SRIM_RS24170 PF10724 Protein of unknown function (DUF2516) SRIM_RS24180 PF01381 Helix-turn-helix SRIM_RS24185 PF00067 Cytochrome P450 SRIM_RS24190 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS24190 PF00107 Zinc-binding dehydrogenase SRIM_RS24195 PF01638 HxlR-like helix-turn-helix SRIM_RS24205 PF13302 Acetyltransferase (GNAT) domain SRIM_RS24225 PF17760 UvrA interaction domain SRIM_RS24225 PF17755 UvrA DNA-binding domain SRIM_RS24225 PF00005 ABC transporter SRIM_RS24235 PF17827 PrmC N-terminal domain SRIM_RS24235 PF13649 Methyltransferase domain SRIM_RS24240 PF03055 Retinal pigment epithelial membrane protein SRIM_RS24250 PF01638 HxlR-like helix-turn-helix SRIM_RS24265 PF17668 Acetyltransferase (GNAT) domain SRIM_RS24265 PF13530 Sterol carrier protein domain SRIM_RS24280 PF02580 D-Tyr-tRNA(Tyr) deacylase SRIM_RS24285 PF01571 Aminomethyltransferase folate-binding domain SRIM_RS24285 PF08669 Glycine cleavage T-protein C-terminal barrel domain SRIM_RS24290 PF01475 Ferric uptake regulator family SRIM_RS24300 PF00005 ABC transporter SRIM_RS24305 PF01032 FecCD transport family SRIM_RS24310 PF08768 Domain of unknown function (DUF1794) SRIM_RS24325 PF07210 Protein of unknown function (DUF1416) SRIM_RS24330 PF00581 Rhodanese-like domain SRIM_RS24350 PF00664 ABC transporter transmembrane region SRIM_RS24350 PF00005 ABC transporter SRIM_RS24355 PF00664 ABC transporter transmembrane region SRIM_RS24355 PF00005 ABC transporter SRIM_RS24365 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS24370 PF00356 Bacterial regulatory proteins, lacI family SRIM_RS24375 PF13180 PDZ domain SRIM_RS24385 PF00072 Response regulator receiver domain SRIM_RS24385 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS24390 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS24390 PF00672 HAMP domain SRIM_RS24390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS24400 PF13460 NAD(P)H-binding SRIM_RS24445 PF02872 5'-nucleotidase, C-terminal domain SRIM_RS24445 PF17936 Bacterial Ig domain SRIM_RS24445 PF00149 Calcineurin-like phosphoesterase SRIM_RS24450 PF00583 Acetyltransferase (GNAT) family SRIM_RS24470 PF17941 Polyphosphate kinase C-terminal domain 1 SRIM_RS24470 PF13089 Polyphosphate kinase N-terminal domain SRIM_RS24470 PF02503 Polyphosphate kinase middle domain SRIM_RS24470 PF13090 Polyphosphate kinase C-terminal domain 2 SRIM_RS24480 PF00300 Histidine phosphatase superfamily (branch 1) SRIM_RS24480 PF00293 NUDIX domain SRIM_RS24485 PF00011 Hsp20/alpha crystallin family SRIM_RS24490 PF00248 Aldo/keto reductase family SRIM_RS24505 PF13439 Glycosyltransferase Family 4 SRIM_RS24505 PF00534 Glycosyl transferases group 1 SRIM_RS24510 PF10722 Putative bacterial sensory transduction regulator SRIM_RS24520 PF00300 Histidine phosphatase superfamily (branch 1) SRIM_RS24525 PF13537 Glutamine amidotransferase domain SRIM_RS24525 PF00733 Asparagine synthase SRIM_RS24540 PF01895 PhoU domain SRIM_RS24545 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS24545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS24550 PF00072 Response regulator receiver domain SRIM_RS24550 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS24560 PF02559 CarD-like/TRCF domain SRIM_RS24565 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SRIM_RS24570 PF02542 YgbB family SRIM_RS24575 PF01243 Pyridoxamine 5'-phosphate oxidase SRIM_RS24580 PF09190 DALR domain SRIM_RS24580 PF01406 tRNA synthetases class I (C) catalytic domain SRIM_RS24585 PF00588 SpoU rRNA Methylase family SRIM_RS24585 PF08032 RNA 2'-O ribose methyltransferase substrate binding SRIM_RS24595 PF00483 Nucleotidyl transferase SRIM_RS24605 PF17912 MalK OB fold domain SRIM_RS24605 PF00005 ABC transporter SRIM_RS24620 PF06445 GyrI-like small molecule binding domain SRIM_RS24620 PF12833 Helix-turn-helix domain SRIM_RS24625 PF01321 Creatinase/Prolidase N-terminal domain SRIM_RS24625 PF00557 Metallopeptidase family M24 SRIM_RS24630 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS24630 PF00107 Zinc-binding dehydrogenase SRIM_RS24635 PF01593 Flavin containing amine oxidoreductase SRIM_RS24655 PF00156 Phosphoribosyl transferase domain SRIM_RS24655 PF05139 Erythromycin esterase SRIM_RS24665 PF02342 TerD domain SRIM_RS24670 PF00472 RF-1 domain SRIM_RS24670 PF03462 PCRF domain SRIM_RS24675 PF01613 Flavin reductase like domain SRIM_RS24680 PF00990 Diguanylate cyclase, GGDEF domain SRIM_RS24680 PF00563 EAL domain SRIM_RS24680 PF03707 Bacterial signalling protein N terminal repeat SRIM_RS24690 PF00294 pfkB family carbohydrate kinase SRIM_RS24695 PF01979 Amidohydrolase family SRIM_RS24700 PF00480 ROK family SRIM_RS24720 PF00982 Glycosyltransferase family 20 SRIM_RS24725 PF00535 Glycosyl transferase family 2 SRIM_RS24730 PF00291 Pyridoxal-phosphate dependent enzyme SRIM_RS24735 PF02597 ThiS family SRIM_RS24740 PF00313 'Cold-shock' DNA-binding domain SRIM_RS24745 PF00118 TCP-1/cpn60 chaperonin family SRIM_RS24750 PF00106 short chain dehydrogenase SRIM_RS24755 PF01235 Sodium:alanine symporter family SRIM_RS24760 PF00367 phosphotransferase system, EIIB SRIM_RS24760 PF02378 Phosphotransferase system, EIIC SRIM_RS24765 PF01380 SIS domain SRIM_RS24770 PF13580 SIS domain SRIM_RS24785 PF07690 Major Facilitator Superfamily SRIM_RS24805 PF03932 CutC family SRIM_RS24810 PF13538 UvrD-like helicase C-terminal domain SRIM_RS24820 PF09594 Glycosyltransferase family 87 SRIM_RS24825 PF04851 Type III restriction enzyme, res subunit SRIM_RS24825 PF00271 Helicase conserved C-terminal domain SRIM_RS24845 PF01497 Periplasmic binding protein SRIM_RS24850 PF00005 ABC transporter SRIM_RS24855 PF01032 FecCD transport family SRIM_RS24860 PF01032 FecCD transport family SRIM_RS24875 PF00313 'Cold-shock' DNA-binding domain SRIM_RS24880 PF02621 Menaquinone biosynthesis SRIM_RS24885 PF01048 Phosphorylase superfamily SRIM_RS24895 PF07690 Major Facilitator Superfamily SRIM_RS24900 PF11228 Protein of unknown function (DUF3027) SRIM_RS24925 PF00860 Permease family SRIM_RS24935 PF01047 MarR family SRIM_RS24950 PF00248 Aldo/keto reductase family SRIM_RS24960 PF00248 Aldo/keto reductase family SRIM_RS24985 PF00005 ABC transporter SRIM_RS24985 PF13732 Domain of unknown function (DUF4162) SRIM_RS24995 PF00266 Aminotransferase class-V SRIM_RS25000 PF13280 WYL domain SRIM_RS25000 PF08279 HTH domain SRIM_RS25005 PF01565 FAD binding domain SRIM_RS25005 PF08031 Berberine and berberine like SRIM_RS25010 PF02913 FAD linked oxidases, C-terminal domain SRIM_RS25010 PF01565 FAD binding domain SRIM_RS25010 PF13183 4Fe-4S dicluster domain SRIM_RS25015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS25015 PF03466 LysR substrate binding domain SRIM_RS25020 PF00892 EamA-like transporter family SRIM_RS25030 PF00067 Cytochrome P450 SRIM_RS25040 PF13732 Domain of unknown function (DUF4162) SRIM_RS25040 PF00005 ABC transporter SRIM_RS25055 PF08608 Wyosine base formation SRIM_RS25055 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain SRIM_RS25065 PF01039 Carboxyl transferase domain SRIM_RS25070 PF00289 Biotin carboxylase, N-terminal domain SRIM_RS25070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SRIM_RS25070 PF00364 Biotin-requiring enzyme SRIM_RS25070 PF02785 Biotin carboxylase C-terminal domain SRIM_RS25075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS25075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS25075 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS25080 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS25080 PF00501 AMP-binding enzyme SRIM_RS25085 PF00378 Enoyl-CoA hydratase/isomerase SRIM_RS25090 PF13977 BetI-type transcriptional repressor, C-terminal SRIM_RS25090 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS25105 PF00285 Citrate synthase, C-terminal domain SRIM_RS25110 PF01243 Pyridoxamine 5'-phosphate oxidase SRIM_RS25110 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region SRIM_RS25120 PF13580 SIS domain SRIM_RS25125 PF18357 Diphteria toxin repressor SH3 domain SRIM_RS25125 PF02742 Iron dependent repressor, metal binding and dimerisation domain SRIM_RS25125 PF01325 Iron dependent repressor, N-terminal DNA binding domain SRIM_RS25150 PF00005 ABC transporter SRIM_RS25180 PF00551 Formyl transferase SRIM_RS25195 PF01740 STAS domain SRIM_RS25200 PF07730 Histidine kinase SRIM_RS25205 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS25205 PF00072 Response regulator receiver domain SRIM_RS25220 PF00069 Protein kinase domain SRIM_RS25225 PF00171 Aldehyde dehydrogenase family SRIM_RS25230 PF05199 GMC oxidoreductase SRIM_RS25245 PF00117 Glutamine amidotransferase class-I SRIM_RS25245 PF00958 GMP synthase C terminal domain SRIM_RS25245 PF02540 NAD synthase SRIM_RS25260 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SRIM_RS25260 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SRIM_RS25270 PF00596 Class II Aldolase and Adducin N-terminal domain SRIM_RS25305 PF00069 Protein kinase domain SRIM_RS25305 PF03793 PASTA domain SRIM_RS25320 PF00072 Response regulator receiver domain SRIM_RS25320 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS25325 PF07690 Major Facilitator Superfamily SRIM_RS25330 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS25360 PF13411 MerR HTH family regulatory protein SRIM_RS25360 PF07739 TipAS antibiotic-recognition domain SRIM_RS25370 PF00107 Zinc-binding dehydrogenase SRIM_RS25370 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS25375 PF00144 Beta-lactamase SRIM_RS25410 PF00877 NlpC/P60 family SRIM_RS25415 PF00580 UvrD/REP helicase N-terminal domain SRIM_RS25415 PF13361 UvrD-like helicase C-terminal domain SRIM_RS25420 PF01551 Peptidase family M23 SRIM_RS25425 PF00561 alpha/beta hydrolase fold SRIM_RS25430 PF02310 B12 binding domain SRIM_RS25445 PF07728 AAA domain (dynein-related subfamily) SRIM_RS25455 PF05762 VWA domain containing CoxE-like protein SRIM_RS25470 PF00549 CoA-ligase SRIM_RS25470 PF08442 ATP-grasp domain SRIM_RS25475 PF00549 CoA-ligase SRIM_RS25475 PF02629 CoA binding domain SRIM_RS25495 PF00551 Formyl transferase SRIM_RS25500 PF01808 AICARFT/IMPCHase bienzyme SRIM_RS25500 PF02142 MGS-like domain SRIM_RS25510 PF06271 RDD family SRIM_RS25515 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SRIM_RS25515 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SRIM_RS25525 PF00180 Isocitrate/isopropylmalate dehydrogenase SRIM_RS25550 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SRIM_RS25550 PF00056 lactate/malate dehydrogenase, NAD binding domain SRIM_RS25575 PF01381 Helix-turn-helix SRIM_RS25600 PF00171 Aldehyde dehydrogenase family SRIM_RS25605 PF05199 GMC oxidoreductase SRIM_RS25605 PF00732 GMC oxidoreductase SRIM_RS25610 PF00571 CBS domain SRIM_RS25610 PF00005 ABC transporter SRIM_RS25620 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS25630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS25630 PF07730 Histidine kinase SRIM_RS25645 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS25645 PF00072 Response regulator receiver domain SRIM_RS25670 PF00155 Aminotransferase class I and II SRIM_RS25670 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS25675 PF02627 Carboxymuconolactone decarboxylase family SRIM_RS25690 PF02861 Clp amino terminal domain, pathogenicity island component SRIM_RS25700 PF02627 Carboxymuconolactone decarboxylase family SRIM_RS25705 PF02627 Carboxymuconolactone decarboxylase family SRIM_RS25710 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS25710 PF00155 Aminotransferase class I and II SRIM_RS25725 PF03738 Glutathionylspermidine synthase preATP-grasp SRIM_RS25730 PF00202 Aminotransferase class-III SRIM_RS25735 PF00464 Serine hydroxymethyltransferase SRIM_RS25740 PF00067 Cytochrome P450 SRIM_RS25745 PF00579 tRNA synthetases class I (W and Y) SRIM_RS25755 PF00106 short chain dehydrogenase SRIM_RS25760 PF01565 FAD binding domain SRIM_RS25765 PF01569 PAP2 superfamily SRIM_RS25770 PF01040 UbiA prenyltransferase family SRIM_RS25775 PF03631 Virulence factor BrkB SRIM_RS25795 PF00082 Subtilase family SRIM_RS25805 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS25810 PF00561 alpha/beta hydrolase fold SRIM_RS25815 PF13411 MerR HTH family regulatory protein SRIM_RS25825 PF13085 2Fe-2S iron-sulfur cluster binding domain SRIM_RS25830 PF00890 FAD binding domain SRIM_RS25830 PF02910 Fumarate reductase flavoprotein C-term SRIM_RS25840 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SRIM_RS25850 PF07691 PA14 domain SRIM_RS25850 PF02838 Glycosyl hydrolase family 20, domain 2 SRIM_RS25850 PF00728 Glycosyl hydrolase family 20, catalytic domain SRIM_RS25875 PF12802 MarR family SRIM_RS25880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SRIM_RS25880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SRIM_RS25880 PF00205 Thiamine pyrophosphate enzyme, central domain SRIM_RS25905 PF07729 FCD domain SRIM_RS25905 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS25915 PF02447 GntP family permease SRIM_RS25935 PF01494 FAD binding domain SRIM_RS25940 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS25940 PF02909 Tetracyclin repressor-like, C-terminal domain SRIM_RS25945 PF01757 Acyltransferase family SRIM_RS25955 PF00535 Glycosyl transferase family 2 SRIM_RS25965 PF02348 Cytidylyltransferase SRIM_RS25970 PF03102 NeuB family SRIM_RS25970 PF08666 SAF domain SRIM_RS25980 PF01546 Peptidase family M20/M25/M40 SRIM_RS25980 PF04107 Glutamate-cysteine ligase family 2(GCS2) SRIM_RS25985 PF02608 ABC transporter substrate-binding protein PnrA-like SRIM_RS25990 PF00005 ABC transporter SRIM_RS25995 PF02653 Branched-chain amino acid transport system / permease component SRIM_RS26000 PF02653 Branched-chain amino acid transport system / permease component SRIM_RS26005 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SRIM_RS26010 PF00591 Glycosyl transferase family, a/b domain SRIM_RS26010 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SRIM_RS26010 PF02885 Glycosyl transferase family, helical bundle domain SRIM_RS26030 PF07690 Major Facilitator Superfamily SRIM_RS26035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS26035 PF03466 LysR substrate binding domain SRIM_RS26050 PF00962 Adenosine/AMP deaminase SRIM_RS26080 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS26080 PF00072 Response regulator receiver domain SRIM_RS26085 PF04542 Sigma-70 region 2 SRIM_RS26085 PF08281 Sigma-70, region 4 SRIM_RS26100 PF00171 Aldehyde dehydrogenase family SRIM_RS26105 PF00171 Aldehyde dehydrogenase family SRIM_RS26110 PF01791 DeoC/LacD family aldolase SRIM_RS26140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SRIM_RS26140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SRIM_RS26140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SRIM_RS26140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SRIM_RS26145 PF01048 Phosphorylase superfamily SRIM_RS26155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SRIM_RS26155 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS26160 PF08220 DeoR-like helix-turn-helix domain SRIM_RS26160 PF00455 DeoR C terminal sensor domain SRIM_RS26165 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS26175 PF13460 NAD(P)H-binding SRIM_RS26180 PF00364 Biotin-requiring enzyme SRIM_RS26180 PF00289 Biotin carboxylase, N-terminal domain SRIM_RS26180 PF02785 Biotin carboxylase C-terminal domain SRIM_RS26180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SRIM_RS26210 PF08361 MAATS-type transcriptional repressor, C-terminal region SRIM_RS26210 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS26220 PF02545 Maf-like protein SRIM_RS26225 PF00905 Penicillin binding protein transpeptidase domain SRIM_RS26240 PF01039 Carboxyl transferase domain SRIM_RS26245 PF03099 Biotin/lipoate A/B protein ligase family SRIM_RS26245 PF02237 Biotin protein ligase C terminal domain SRIM_RS26245 PF08279 HTH domain SRIM_RS26250 PF00211 Adenylate and Guanylate cyclase catalytic domain SRIM_RS26250 PF16701 Adenylate cyclase regulatory domain SRIM_RS26255 PF00378 Enoyl-CoA hydratase/isomerase SRIM_RS26260 PF00990 Diguanylate cyclase, GGDEF domain SRIM_RS26265 PF00221 Aromatic amino acid lyase SRIM_RS26290 PF00144 Beta-lactamase SRIM_RS26305 PF00144 Beta-lactamase SRIM_RS26310 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS26310 PF02909 Tetracyclin repressor-like, C-terminal domain SRIM_RS26320 PF01625 Peptide methionine sulfoxide reductase SRIM_RS26330 PF01053 Cys/Met metabolism PLP-dependent enzyme SRIM_RS26340 PF08281 Sigma-70, region 4 SRIM_RS26340 PF04542 Sigma-70 region 2 SRIM_RS26345 PF05491 RuvB C-terminal winged helix domain SRIM_RS26345 PF17864 RuvB AAA lid domain SRIM_RS26345 PF05496 Holliday junction DNA helicase RuvB P-loop domain SRIM_RS26350 PF13291 ACT domain SRIM_RS26350 PF00291 Pyridoxal-phosphate dependent enzyme SRIM_RS26360 PF01061 ABC-2 type transporter SRIM_RS26365 PF01272 Transcription elongation factor, GreA/GreB, C-term SRIM_RS26365 PF03449 Transcription elongation factor, N-terminal SRIM_RS26375 PF02585 GlcNAc-PI de-N-acetylase SRIM_RS26395 PF03190 Protein of unknown function, DUF255 SRIM_RS26400 PF00107 Zinc-binding dehydrogenase SRIM_RS26400 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS26405 PF13411 MerR HTH family regulatory protein SRIM_RS26415 PF03006 Haemolysin-III related SRIM_RS26420 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain SRIM_RS26420 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain SRIM_RS26430 PF00155 Aminotransferase class I and II SRIM_RS26440 PF07969 Amidohydrolase family SRIM_RS26450 PF00294 pfkB family carbohydrate kinase SRIM_RS26455 PF01614 Bacterial transcriptional regulator SRIM_RS26455 PF09339 IclR helix-turn-helix domain SRIM_RS26460 PF01042 Endoribonuclease L-PSP SRIM_RS26465 PF02447 GntP family permease SRIM_RS26495 PF00246 Zinc carboxypeptidase SRIM_RS26505 PF02018 Carbohydrate binding domain SRIM_RS26505 PF00704 Glycosyl hydrolases family 18 SRIM_RS26505 PF00041 Fibronectin type III domain SRIM_RS26520 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SRIM_RS26535 PF00437 Type II/IV secretion system protein SRIM_RS26565 PF00691 OmpA family SRIM_RS26575 PF07690 Major Facilitator Superfamily SRIM_RS26610 PF00248 Aldo/keto reductase family SRIM_RS26615 PF01255 Putative undecaprenyl diphosphate synthase SRIM_RS26620 PF02562 PhoH-like protein SRIM_RS26620 PF13638 PIN domain SRIM_RS26630 PF01594 AI-2E family transporter SRIM_RS26640 PF02627 Carboxymuconolactone decarboxylase family SRIM_RS26645 PF00578 AhpC/TSA family SRIM_RS26650 PF11774 Lsr2 SRIM_RS26655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS26655 PF03466 LysR substrate binding domain SRIM_RS26670 PF00005 ABC transporter SRIM_RS26685 PF00005 ABC transporter SRIM_RS26700 PF00912 Transglycosylase SRIM_RS26700 PF00905 Penicillin binding protein transpeptidase domain SRIM_RS26705 PF00199 Catalase SRIM_RS26705 PF06628 Catalase-related immune-responsive SRIM_RS26715 PF05175 Methyltransferase small domain SRIM_RS26715 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus SRIM_RS26725 PF10415 Fumarase C C-terminus SRIM_RS26725 PF00206 Lyase SRIM_RS26730 PF05681 Fumarate hydratase (Fumerase) SRIM_RS26730 PF05683 Fumarase C-terminus SRIM_RS26740 PF02467 Transcription factor WhiB SRIM_RS26745 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded SRIM_RS26755 PF00881 Nitroreductase family SRIM_RS26760 PF02609 Exonuclease VII small subunit SRIM_RS26765 PF02601 Exonuclease VII, large subunit SRIM_RS26765 PF13742 OB-fold nucleic acid binding domain SRIM_RS26775 PF02401 LytB protein SRIM_RS26780 PF00480 ROK family SRIM_RS26790 PF01926 50S ribosome-binding GTPase SRIM_RS26790 PF06071 Protein of unknown function (DUF933) SRIM_RS26820 PF00561 alpha/beta hydrolase fold SRIM_RS26820 PF00364 Biotin-requiring enzyme SRIM_RS26830 PF00155 Aminotransferase class I and II SRIM_RS26830 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS26835 PF13520 Amino acid permease SRIM_RS26845 PF00293 NUDIX domain SRIM_RS26860 PF13183 4Fe-4S dicluster domain SRIM_RS26860 PF13085 2Fe-2S iron-sulfur cluster binding domain SRIM_RS26865 PF00890 FAD binding domain SRIM_RS26865 PF02910 Fumarate reductase flavoprotein C-term SRIM_RS26885 PF00679 Elongation factor G C-terminus SRIM_RS26885 PF14492 Elongation Factor G, domain II SRIM_RS26885 PF00009 Elongation factor Tu GTP binding domain SRIM_RS26885 PF03144 Elongation factor Tu domain 2 SRIM_RS26890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SRIM_RS26895 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS26900 PF12911 N-terminal TM domain of oligopeptide transport permease C SRIM_RS26900 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS26905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SRIM_RS26905 PF00005 ABC transporter SRIM_RS26910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SRIM_RS26910 PF00005 ABC transporter SRIM_RS26940 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS26945 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS26945 PF12911 N-terminal TM domain of oligopeptide transport permease C SRIM_RS26950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SRIM_RS26950 PF00005 ABC transporter SRIM_RS26955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SRIM_RS26955 PF00005 ABC transporter SRIM_RS26965 PF00005 ABC transporter SRIM_RS26965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SRIM_RS26970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SRIM_RS26970 PF00005 ABC transporter SRIM_RS26975 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS26980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SRIM_RS26985 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS26985 PF12911 N-terminal TM domain of oligopeptide transport permease C SRIM_RS26995 PF00326 Prolyl oligopeptidase family SRIM_RS26995 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region SRIM_RS27005 PF02585 GlcNAc-PI de-N-acetylase SRIM_RS27020 PF00144 Beta-lactamase SRIM_RS27025 PF00005 ABC transporter SRIM_RS27035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS27035 PF07730 Histidine kinase SRIM_RS27040 PF00072 Response regulator receiver domain SRIM_RS27040 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS27060 PF00037 4Fe-4S binding domain SRIM_RS27065 PF00155 Aminotransferase class I and II SRIM_RS27080 PF01546 Peptidase family M20/M25/M40 SRIM_RS27080 PF07687 Peptidase dimerisation domain SRIM_RS27085 PF03641 Possible lysine decarboxylase SRIM_RS27090 PF00809 Pterin binding enzyme SRIM_RS27100 PF13302 Acetyltransferase (GNAT) domain SRIM_RS27100 PF03352 Methyladenine glycosylase SRIM_RS27100 PF00117 Glutamine amidotransferase class-I SRIM_RS27100 PF00958 GMP synthase C terminal domain SRIM_RS27100 PF13673 Acetyltransferase (GNAT) domain SRIM_RS27105 PF00378 Enoyl-CoA hydratase/isomerase SRIM_RS27115 PF01596 O-methyltransferase SRIM_RS27120 PF04542 Sigma-70 region 2 SRIM_RS27120 PF08281 Sigma-70, region 4 SRIM_RS27130 PF13180 PDZ domain SRIM_RS27135 PF02416 mttA/Hcf106 family SRIM_RS27145 PF01883 Iron-sulfur cluster assembly protein SRIM_RS27145 PF10609 NUBPL iron-transfer P-loop NTPase SRIM_RS27170 PF01544 CorA-like Mg2+ transporter protein SRIM_RS27180 PF07690 Major Facilitator Superfamily SRIM_RS27195 PF01914 MarC family integral membrane protein SRIM_RS27205 PF01936 NYN domain SRIM_RS27215 PF00271 Helicase conserved C-terminal domain SRIM_RS27215 PF00270 DEAD/DEAH box helicase SRIM_RS27245 PF08386 TAP-like protein SRIM_RS27245 PF00561 alpha/beta hydrolase fold SRIM_RS27255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SRIM_RS27260 PF12911 N-terminal TM domain of oligopeptide transport permease C SRIM_RS27260 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS27265 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS27270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SRIM_RS27270 PF00005 ABC transporter SRIM_RS27295 PF00581 Rhodanese-like domain SRIM_RS27295 PF00899 ThiF family SRIM_RS27310 PF00580 UvrD/REP helicase N-terminal domain SRIM_RS27310 PF13361 UvrD-like helicase C-terminal domain SRIM_RS27315 PF13361 UvrD-like helicase C-terminal domain SRIM_RS27315 PF00580 UvrD/REP helicase N-terminal domain SRIM_RS27320 PF01546 Peptidase family M20/M25/M40 SRIM_RS27330 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain SRIM_RS27330 PF09297 NADH pyrophosphatase zinc ribbon domain SRIM_RS27330 PF00293 NUDIX domain SRIM_RS27340 PF00462 Glutaredoxin SRIM_RS27345 PF13361 UvrD-like helicase C-terminal domain SRIM_RS27345 PF00580 UvrD/REP helicase N-terminal domain SRIM_RS27345 PF00570 HRDC domain SRIM_RS27355 PF02178 AT hook motif SRIM_RS27355 PF02467 Transcription factor WhiB SRIM_RS27370 PF03109 ABC1 family SRIM_RS27385 PF02342 TerD domain SRIM_RS27415 PF02391 MoaE protein SRIM_RS27425 PF05362 Lon protease (S16) C-terminal proteolytic domain SRIM_RS27425 PF13180 PDZ domain SRIM_RS27435 PF03699 Uncharacterised protein family (UPF0182) SRIM_RS27465 PF00199 Catalase SRIM_RS27465 PF06628 Catalase-related immune-responsive SRIM_RS27475 PF00459 Inositol monophosphatase family SRIM_RS27485 PF00893 Small Multidrug Resistance protein SRIM_RS27495 PF03193 RsgA GTPase SRIM_RS27500 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SRIM_RS27510 PF02586 SOS response associated peptidase (SRAP) SRIM_RS27520 PF06114 IrrE N-terminal-like domain SRIM_RS27520 PF01381 Helix-turn-helix SRIM_RS27520 PF09856 Predicted transcriptional regulator (DUF2083) SRIM_RS27525 PF08281 Sigma-70, region 4 SRIM_RS27525 PF04542 Sigma-70 region 2 SRIM_RS27530 PF13490 Putative zinc-finger SRIM_RS27540 PF01327 Polypeptide deformylase SRIM_RS27545 PF00905 Penicillin binding protein transpeptidase domain SRIM_RS27545 PF00912 Transglycosylase SRIM_RS27550 PF00268 Ribonucleotide reductase, small chain SRIM_RS27555 PF00317 Ribonucleotide reductase, all-alpha domain SRIM_RS27555 PF02867 Ribonucleotide reductase, barrel domain SRIM_RS27555 PF03477 ATP cone domain SRIM_RS27575 PF00474 Sodium:solute symporter family SRIM_RS27590 PF02554 Carbon starvation protein CstA SRIM_RS27590 PF13722 5TM C-terminal transporter carbon starvation CstA SRIM_RS27595 PF07702 UTRA domain SRIM_RS27595 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS27600 PF01547 Bacterial extracellular solute-binding protein SRIM_RS27605 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS27610 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS27615 PF00933 Glycosyl hydrolase family 3 N terminal domain SRIM_RS27615 PF01915 Glycosyl hydrolase family 3 C-terminal domain SRIM_RS27620 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SRIM_RS27625 PF01380 SIS domain SRIM_RS27640 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS27645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS27645 PF12282 Signal transduction histidine kinase SRIM_RS27645 PF07568 Histidine kinase SRIM_RS27650 PF02467 Transcription factor WhiB SRIM_RS27655 PF00781 Diacylglycerol kinase catalytic domain SRIM_RS27665 PF04545 Sigma-70, region 4 SRIM_RS27665 PF04539 Sigma-70 region 3 SRIM_RS27665 PF04542 Sigma-70 region 2 SRIM_RS27670 PF13581 Histidine kinase-like ATPase domain SRIM_RS27685 PF00999 Sodium/hydrogen exchanger family SRIM_RS27705 PF12833 Helix-turn-helix domain SRIM_RS27710 PF04960 Glutaminase SRIM_RS27725 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SRIM_RS27725 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SRIM_RS27730 PF00403 Heavy-metal-associated domain SRIM_RS27740 PF07690 Major Facilitator Superfamily SRIM_RS27745 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS27750 PF01494 FAD binding domain SRIM_RS27755 PF01544 CorA-like Mg2+ transporter protein SRIM_RS27760 PF07690 Major Facilitator Superfamily SRIM_RS27765 PF07729 FCD domain SRIM_RS27765 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS27770 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SRIM_RS27775 PF02641 Uncharacterized ACR, COG1993 SRIM_RS27780 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SRIM_RS27800 PF02031 Streptomyces extracellular neutral proteinase (M7) family SRIM_RS27805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS27805 PF03466 LysR substrate binding domain SRIM_RS27810 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS27810 PF00931 NB-ARC domain SRIM_RS27810 PF03704 Bacterial transcriptional activator domain SRIM_RS27815 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS27815 PF00931 NB-ARC domain SRIM_RS27815 PF03704 Bacterial transcriptional activator domain SRIM_RS27840 PF08448 PAS fold SRIM_RS27840 PF03705 CheR methyltransferase, all-alpha domain SRIM_RS27840 PF01739 CheR methyltransferase, SAM binding domain SRIM_RS27840 PF01339 CheB methylesterase SRIM_RS27845 PF00072 Response regulator receiver domain SRIM_RS27845 PF01339 CheB methylesterase SRIM_RS27850 PF09055 Nickel-containing superoxide dismutase SRIM_RS27870 PF00005 ABC transporter SRIM_RS27875 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS27880 PF00497 Bacterial extracellular solute-binding proteins, family 3 SRIM_RS27885 PF00390 Malic enzyme, N-terminal domain SRIM_RS27885 PF03949 Malic enzyme, NAD binding domain SRIM_RS27895 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS27895 PF00107 Zinc-binding dehydrogenase SRIM_RS27900 PF05962 HutD SRIM_RS27910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS27910 PF03466 LysR substrate binding domain SRIM_RS28000 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SRIM_RS28000 PF00676 Dehydrogenase E1 component SRIM_RS28000 PF16870 2-oxoglutarate dehydrogenase C-terminal SRIM_RS28000 PF02779 Transketolase, pyrimidine binding domain SRIM_RS28000 PF16078 2-oxoglutarate dehydrogenase N-terminus SRIM_RS28005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS28005 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS28005 PF00672 HAMP domain SRIM_RS28010 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS28010 PF00072 Response regulator receiver domain SRIM_RS28025 PF02190 ATP-dependent protease La (LON) substrate-binding domain SRIM_RS28025 PF05362 Lon protease (S16) C-terminal proteolytic domain SRIM_RS28025 PF00004 ATPase family associated with various cellular activities (AAA) SRIM_RS28035 PF01183 Glycosyl hydrolases family 25 SRIM_RS28045 PF00067 Cytochrome P450 SRIM_RS28050 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS28060 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS28060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS28090 PF00877 NlpC/P60 family SRIM_RS28095 PF02018 Carbohydrate binding domain SRIM_RS28095 PF00704 Glycosyl hydrolases family 18 SRIM_RS28095 PF00041 Fibronectin type III domain SRIM_RS28105 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS28110 PF11583 P-aminobenzoate N-oxygenase AurF SRIM_RS28120 PF00005 ABC transporter SRIM_RS28130 PF00905 Penicillin binding protein transpeptidase domain SRIM_RS28135 PF01098 Cell cycle protein SRIM_RS28140 PF00067 Cytochrome P450 SRIM_RS28160 PF00067 Cytochrome P450 SRIM_RS28175 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS28175 PF00550 Phosphopantetheine attachment site SRIM_RS28175 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS28175 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS28175 PF00668 Condensation domain SRIM_RS28175 PF00698 Acyl transferase domain SRIM_RS28180 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SRIM_RS28180 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SRIM_RS28190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS28190 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS28190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS28205 PF07690 Major Facilitator Superfamily SRIM_RS28210 PF00550 Phosphopantetheine attachment site SRIM_RS28210 PF07993 Male sterility protein SRIM_RS28210 PF00668 Condensation domain SRIM_RS28210 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS28210 PF00501 AMP-binding enzyme SRIM_RS28220 PF00975 Thioesterase domain SRIM_RS28220 PF00550 Phosphopantetheine attachment site SRIM_RS28220 PF00668 Condensation domain SRIM_RS28220 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS28220 PF00501 AMP-binding enzyme SRIM_RS28245 PF00072 Response regulator receiver domain SRIM_RS28245 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS28250 PF00750 tRNA synthetases class I (R) SRIM_RS28250 PF05746 DALR anticodon binding domain SRIM_RS28250 PF03485 Arginyl tRNA synthetase N terminal domain SRIM_RS28255 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SRIM_RS28255 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SRIM_RS28260 PF01842 ACT domain SRIM_RS28260 PF00742 Homoserine dehydrogenase SRIM_RS28260 PF03447 Homoserine dehydrogenase, NAD binding domain SRIM_RS28265 PF00291 Pyridoxal-phosphate dependent enzyme SRIM_RS28270 PF00288 GHMP kinases N terminal domain SRIM_RS28270 PF08544 GHMP kinases C terminal SRIM_RS28275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SRIM_RS28275 PF07498 Rho termination factor, N-terminal domain SRIM_RS28275 PF07497 Rho termination factor, RNA-binding domain SRIM_RS28280 PF03816 Cell envelope-related transcriptional attenuator domain SRIM_RS28285 PF01197 Ribosomal protein L31 SRIM_RS28290 PF03462 PCRF domain SRIM_RS28290 PF00472 RF-1 domain SRIM_RS28295 PF17827 PrmC N-terminal domain SRIM_RS28295 PF13649 Methyltransferase domain SRIM_RS28300 PF01300 Telomere recombination SRIM_RS28305 PF01451 Low molecular weight phosphotyrosine protein phosphatase SRIM_RS28310 PF00464 Serine hydroxymethyltransferase SRIM_RS28315 PF00953 Glycosyl transferase family 4 SRIM_RS28325 PF00119 ATP synthase A chain SRIM_RS28330 PF00137 ATP synthase subunit C SRIM_RS28335 PF00430 ATP synthase B/B' CF(0) SRIM_RS28340 PF00213 ATP synthase delta (OSCP) subunit SRIM_RS28345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SRIM_RS28345 PF02874 ATP synthase alpha/beta family, beta-barrel domain SRIM_RS28345 PF00306 ATP synthase alpha/beta chain, C terminal domain SRIM_RS28350 PF00231 ATP synthase SRIM_RS28355 PF02874 ATP synthase alpha/beta family, beta-barrel domain SRIM_RS28355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SRIM_RS28360 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SRIM_RS28370 PF00553 Cellulose binding domain SRIM_RS28370 PF00041 Fibronectin type III domain SRIM_RS28370 PF00704 Glycosyl hydrolases family 18 SRIM_RS28375 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS28375 PF00072 Response regulator receiver domain SRIM_RS28380 PF00672 HAMP domain SRIM_RS28380 PF07730 Histidine kinase SRIM_RS28380 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term SRIM_RS28380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS28390 PF01923 Cobalamin adenosyltransferase SRIM_RS28400 PF00005 ABC transporter SRIM_RS28400 PF13732 Domain of unknown function (DUF4162) SRIM_RS28405 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS28410 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SRIM_RS28410 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SRIM_RS28425 PF01939 Endonuclease NucS SRIM_RS28450 PF00005 ABC transporter SRIM_RS28460 PF00005 ABC transporter SRIM_RS28480 PF02803 Thiolase, C-terminal domain SRIM_RS28480 PF00108 Thiolase, N-terminal domain SRIM_RS28500 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS28500 PF00072 Response regulator receiver domain SRIM_RS28505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS28505 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS28505 PF00672 HAMP domain SRIM_RS28535 PF01910 Thiamine-binding protein SRIM_RS28555 PF12823 Domain of unknown function (DUF3817) SRIM_RS28560 PF01642 Methylmalonyl-CoA mutase SRIM_RS28560 PF02310 B12 binding domain SRIM_RS28565 PF02355 Protein export membrane protein SRIM_RS28565 PF07549 SecD/SecF GG Motif SRIM_RS28575 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS28575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS28575 PF00672 HAMP domain SRIM_RS28585 PF03033 Glycosyltransferase family 28 N-terminal domain SRIM_RS28585 PF04101 Glycosyltransferase family 28 C-terminal domain SRIM_RS28590 PF16363 GDP-mannose 4,6 dehydratase SRIM_RS28595 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS28595 PF16859 Tetracyclin repressor-like, C-terminal domain SRIM_RS28600 PF00085 Thioredoxin SRIM_RS28640 PF02887 Pyruvate kinase, alpha/beta domain SRIM_RS28640 PF00224 Pyruvate kinase, barrel domain SRIM_RS28645 PF00871 Acetokinase family SRIM_RS28650 PF07085 DRTGG domain SRIM_RS28650 PF01515 Phosphate acetyl/butaryl transferase SRIM_RS28655 PF00365 Phosphofructokinase SRIM_RS28680 PF06628 Catalase-related immune-responsive SRIM_RS28680 PF00199 Catalase SRIM_RS28685 PF03631 Virulence factor BrkB SRIM_RS28690 PF02687 FtsX-like permease family SRIM_RS28690 PF12704 MacB-like periplasmic core domain SRIM_RS28695 PF02687 FtsX-like permease family SRIM_RS28695 PF00005 ABC transporter SRIM_RS28695 PF12704 MacB-like periplasmic core domain SRIM_RS28700 PF01323 DSBA-like thioredoxin domain SRIM_RS28710 PF00400 WD domain, G-beta repeat SRIM_RS28710 PF12894 Anaphase-promoting complex subunit 4 WD40 domain SRIM_RS28715 PF02983 Alpha-lytic protease prodomain SRIM_RS28720 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS28725 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS28735 PF00072 Response regulator receiver domain SRIM_RS28735 PF08279 HTH domain SRIM_RS28740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS28740 PF17203 Single cache domain 3 SRIM_RS28740 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SRIM_RS28745 PF00375 Sodium:dicarboxylate symporter family SRIM_RS28750 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS28755 PF07690 Major Facilitator Superfamily SRIM_RS28770 PF00248 Aldo/keto reductase family SRIM_RS28775 PF00128 Alpha amylase, catalytic domain SRIM_RS28775 PF02806 Alpha amylase, C-terminal all-beta domain SRIM_RS28775 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SRIM_RS28780 PF18085 Maltokinase N-terminal cap domain SRIM_RS28780 PF01636 Phosphotransferase enzyme family SRIM_RS28785 PF00128 Alpha amylase, catalytic domain SRIM_RS28785 PF16657 Maltogenic Amylase, C-terminal domain SRIM_RS28790 PF11896 Domain of unknown function (DUF3416) SRIM_RS28795 PF00082 Subtilase family SRIM_RS28795 PF05922 Peptidase inhibitor I9 SRIM_RS28800 PF00343 Carbohydrate phosphorylase SRIM_RS28800 PF11897 Protein of unknown function (DUF3417) SRIM_RS28810 PF01965 DJ-1/PfpI family SRIM_RS28815 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS28815 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS28815 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS28815 PF08990 Erythronolide synthase docking SRIM_RS28815 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS28815 PF00698 Acyl transferase domain SRIM_RS28815 PF14765 Polyketide synthase dehydratase SRIM_RS28815 PF00550 Phosphopantetheine attachment site SRIM_RS28815 PF08659 KR domain SRIM_RS28825 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS28825 PF00072 Response regulator receiver domain SRIM_RS28830 PF02868 Thermolysin metallopeptidase, alpha-helical domain SRIM_RS28830 PF01447 Thermolysin metallopeptidase, catalytic domain SRIM_RS28830 PF07504 Fungalysin/Thermolysin Propeptide Motif SRIM_RS28830 PF01483 Proprotein convertase P-domain SRIM_RS28835 PF07504 Fungalysin/Thermolysin Propeptide Motif SRIM_RS28835 PF01483 Proprotein convertase P-domain SRIM_RS28835 PF01447 Thermolysin metallopeptidase, catalytic domain SRIM_RS28835 PF02868 Thermolysin metallopeptidase, alpha-helical domain SRIM_RS28840 PF04978 Protein of unknown function (DUF664) SRIM_RS28845 PF08281 Sigma-70, region 4 SRIM_RS28845 PF12680 SnoaL-like domain SRIM_RS28845 PF04542 Sigma-70 region 2 SRIM_RS28850 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS28855 PF00135 Carboxylesterase family SRIM_RS28860 PF01494 FAD binding domain SRIM_RS28865 PF07690 Major Facilitator Superfamily SRIM_RS28870 PF00664 ABC transporter transmembrane region SRIM_RS28870 PF00005 ABC transporter SRIM_RS28875 PF00005 ABC transporter SRIM_RS28875 PF00664 ABC transporter transmembrane region SRIM_RS28880 PF00128 Alpha amylase, catalytic domain SRIM_RS28880 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SRIM_RS28885 PF03734 L,D-transpeptidase catalytic domain SRIM_RS28885 PF17964 Bacterial Ig domain SRIM_RS28895 PF00378 Enoyl-CoA hydratase/isomerase SRIM_RS28910 PF06965 Na+/H+ antiporter 1 SRIM_RS28910 PF13462 Thioredoxin SRIM_RS28915 PF02683 Cytochrome C biogenesis protein transmembrane region SRIM_RS28935 PF02540 NAD synthase SRIM_RS28975 PF03313 Serine dehydratase alpha chain SRIM_RS28975 PF03315 Serine dehydratase beta chain SRIM_RS28980 PF13520 Amino acid permease SRIM_RS28985 PF00464 Serine hydroxymethyltransferase SRIM_RS28990 PF01597 Glycine cleavage H-protein SRIM_RS28995 PF08669 Glycine cleavage T-protein C-terminal barrel domain SRIM_RS28995 PF01571 Aminomethyltransferase folate-binding domain SRIM_RS29020 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS29020 PF12911 N-terminal TM domain of oligopeptide transport permease C SRIM_RS29025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SRIM_RS29030 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS29035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SRIM_RS29035 PF00005 ABC transporter SRIM_RS29040 PF00005 ABC transporter SRIM_RS29040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SRIM_RS29050 PF11838 ERAP1-like C-terminal domain SRIM_RS29050 PF01433 Peptidase family M1 domain SRIM_RS29060 PF03458 UPF0126 domain SRIM_RS29085 PF00931 NB-ARC domain SRIM_RS29085 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS29085 PF03704 Bacterial transcriptional activator domain SRIM_RS29090 PF00561 alpha/beta hydrolase fold SRIM_RS29095 PF00266 Aminotransferase class-V SRIM_RS29115 PF00248 Aldo/keto reductase family SRIM_RS29125 PF03023 Lipid II flippase MurJ SRIM_RS29130 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SRIM_RS29130 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SRIM_RS29140 PF00106 short chain dehydrogenase SRIM_RS29150 PF03120 NAD-dependent DNA ligase OB-fold domain SRIM_RS29150 PF12826 Helix-hairpin-helix motif SRIM_RS29150 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SRIM_RS29150 PF00533 BRCA1 C Terminus (BRCT) domain SRIM_RS29150 PF01653 NAD-dependent DNA ligase adenylation domain SRIM_RS29155 PF03707 Bacterial signalling protein N terminal repeat SRIM_RS29155 PF00563 EAL domain SRIM_RS29155 PF00990 Diguanylate cyclase, GGDEF domain SRIM_RS29160 PF02686 Glu-tRNAGln amidotransferase C subunit SRIM_RS29165 PF01425 Amidase SRIM_RS29175 PF02637 GatB domain SRIM_RS29175 PF02934 GatB/GatE catalytic domain SRIM_RS29180 PF00041 Fibronectin type III domain SRIM_RS29180 PF02018 Carbohydrate binding domain SRIM_RS29180 PF00704 Glycosyl hydrolases family 18 SRIM_RS29185 PF01565 FAD binding domain SRIM_RS29185 PF08031 Berberine and berberine like SRIM_RS29215 PF04185 Phosphoesterase family SRIM_RS29215 PF05506 Domain of unknown function (DUF756) SRIM_RS29220 PF03176 MMPL family SRIM_RS29235 PF00072 Response regulator receiver domain SRIM_RS29235 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS29245 PF07995 Glucose / Sorbosone dehydrogenase SRIM_RS29250 PF00248 Aldo/keto reductase family SRIM_RS29255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SRIM_RS29265 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SRIM_RS29265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SRIM_RS29265 PF00205 Thiamine pyrophosphate enzyme, central domain SRIM_RS29270 PF10369 Small subunit of acetolactate synthase SRIM_RS29275 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SRIM_RS29275 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SRIM_RS29280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SRIM_RS29280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SRIM_RS29280 PF01842 ACT domain SRIM_RS29295 PF05651 Putative sugar diacid recognition SRIM_RS29295 PF17853 GGDEF-like domain SRIM_RS29295 PF13556 PucR C-terminal helix-turn-helix domain SRIM_RS29300 PF01619 Proline dehydrogenase SRIM_RS29305 PF00171 Aldehyde dehydrogenase family SRIM_RS29315 PF16656 Purple acid Phosphatase, N-terminal domain SRIM_RS29315 PF00149 Calcineurin-like phosphoesterase SRIM_RS29320 PF00180 Isocitrate/isopropylmalate dehydrogenase SRIM_RS29325 PF01063 Amino-transferase class IV SRIM_RS29330 PF04371 Porphyromonas-type peptidyl-arginine deiminase SRIM_RS29335 PF13977 BetI-type transcriptional repressor, C-terminal SRIM_RS29335 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS29345 PF00083 Sugar (and other) transporter SRIM_RS29350 PF08502 LeuA allosteric (dimerisation) domain SRIM_RS29350 PF00682 HMGL-like SRIM_RS29355 PF04264 YceI-like domain SRIM_RS29360 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain SRIM_RS29360 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain SRIM_RS29360 PF02278 Polysaccharide lyase family 8, super-sandwich domain SRIM_RS29365 PF01039 Carboxyl transferase domain SRIM_RS29380 PF07690 Major Facilitator Superfamily SRIM_RS29385 PF02734 DAK2 domain SRIM_RS29385 PF02733 Dak1 domain SRIM_RS29400 PF03259 Roadblock/LC7 domain SRIM_RS29420 PF03259 Roadblock/LC7 domain SRIM_RS29435 PF01557 Fumarylacetoacetate (FAA) hydrolase family SRIM_RS29440 PF00749 tRNA synthetases class I (E and Q), catalytic domain SRIM_RS29530 PF09339 IclR helix-turn-helix domain SRIM_RS29530 PF01614 Bacterial transcriptional regulator SRIM_RS29535 PF00330 Aconitase family (aconitate hydratase) SRIM_RS29540 PF00694 Aconitase C-terminal domain SRIM_RS29550 PF00216 Bacterial DNA-binding protein SRIM_RS29560 PF01983 Guanylyl transferase CofC like SRIM_RS29570 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SRIM_RS29570 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SRIM_RS29575 PF01820 D-ala D-ala ligase N-terminus SRIM_RS29575 PF07478 D-ala D-ala ligase C-terminus SRIM_RS29590 PF00586 AIR synthase related protein, N-terminal domain SRIM_RS29590 PF02769 AIR synthase related protein, C-terminal domain SRIM_RS29595 PF08543 Phosphomethylpyrimidine kinase SRIM_RS29600 PF00830 Ribosomal L28 family SRIM_RS29605 PF13684 Dihydroxyacetone kinase family SRIM_RS29605 PF02734 DAK2 domain SRIM_RS29610 PF00270 DEAD/DEAH box helicase SRIM_RS29610 PF17191 RecG wedge domain SRIM_RS29610 PF00271 Helicase conserved C-terminal domain SRIM_RS29620 PF01467 Cytidylyltransferase-like SRIM_RS29630 PF02620 Large ribosomal RNA subunit accumulation protein YceD SRIM_RS29635 PF01783 Ribosomal L32p protein family SRIM_RS29640 PF00035 Double-stranded RNA binding motif SRIM_RS29640 PF14622 Ribonuclease-III-like SRIM_RS29645 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SRIM_RS29645 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SRIM_RS29650 PF01638 HxlR-like helix-turn-helix SRIM_RS29655 PF03358 NADPH-dependent FMN reductase SRIM_RS29670 PF00708 Acylphosphatase SRIM_RS29680 PF06470 SMC proteins Flexible Hinge Domain SRIM_RS29680 PF02463 RecF/RecN/SMC N terminal domain SRIM_RS29685 PF00083 Sugar (and other) transporter SRIM_RS29695 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin SRIM_RS29700 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS29705 PF00448 SRP54-type protein, GTPase domain SRIM_RS29705 PF02881 SRP54-type protein, helical bundle domain SRIM_RS29725 PF00543 Nitrogen regulatory protein P-II SRIM_RS29730 PF08335 GlnD PII-uridylyltransferase SRIM_RS29730 PF01966 HD domain SRIM_RS29730 PF01909 Nucleotidyltransferase domain SRIM_RS29735 PF02978 Signal peptide binding domain SRIM_RS29735 PF00448 SRP54-type protein, GTPase domain SRIM_RS29735 PF02881 SRP54-type protein, helical bundle domain SRIM_RS29740 PF01676 Metalloenzyme superfamily SRIM_RS29750 PF00155 Aminotransferase class I and II SRIM_RS29755 PF02126 Phosphotriesterase family SRIM_RS29760 PF10797 Protein of unknown function SRIM_RS29765 PF10941 Protein of unknown function DUF2620 SRIM_RS29790 PF00886 Ribosomal protein S16 SRIM_RS29800 PF05239 PRC-barrel domain SRIM_RS29800 PF01782 RimM N-terminal domain SRIM_RS29805 PF01746 tRNA (Guanine-1)-methyltransferase SRIM_RS29810 PF01245 Ribosomal protein L19 SRIM_RS29820 PF10502 Signal peptidase, peptidase S26 SRIM_RS29825 PF10502 Signal peptidase, peptidase S26 SRIM_RS29830 PF10502 Signal peptidase, peptidase S26 SRIM_RS29835 PF10502 Signal peptidase, peptidase S26 SRIM_RS29840 PF00293 NUDIX domain SRIM_RS29845 PF10611 Protein of unknown function (DUF2469) SRIM_RS29850 PF02021 Uncharacterised protein family UPF0102 SRIM_RS29855 PF01078 Magnesium chelatase, subunit ChlI SRIM_RS29855 PF13335 Magnesium chelatase, subunit ChlI C-terminal SRIM_RS29860 PF17782 DprA winged helix domain SRIM_RS29860 PF02481 DNA recombination-mediator protein A SRIM_RS29865 PF04539 Sigma-70 region 3 SRIM_RS29865 PF04545 Sigma-70, region 4 SRIM_RS29865 PF04542 Sigma-70 region 2 SRIM_RS29880 PF00318 Ribosomal protein S2 SRIM_RS29885 PF00889 Elongation factor TS SRIM_RS29890 PF00696 Amino acid kinase family SRIM_RS29895 PF01765 Ribosome recycling factor SRIM_RS29905 PF04055 Radical SAM superfamily SRIM_RS29915 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS29920 PF00005 ABC transporter SRIM_RS29920 PF08402 TOBE domain SRIM_RS29940 PF00005 ABC transporter SRIM_RS29945 PF00202 Aminotransferase class-III SRIM_RS29955 PF00171 Aldehyde dehydrogenase family SRIM_RS29980 PF00962 Adenosine/AMP deaminase SRIM_RS29995 PF00171 Aldehyde dehydrogenase family SRIM_RS30005 PF00005 ABC transporter SRIM_RS30005 PF08402 TOBE domain SRIM_RS30010 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS30015 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS30020 PF01266 FAD dependent oxidoreductase SRIM_RS30030 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS30035 PF00483 Nucleotidyl transferase SRIM_RS30040 PF16363 GDP-mannose 4,6 dehydratase SRIM_RS30045 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SRIM_RS30050 PF03559 NDP-hexose 2,3-dehydratase SRIM_RS30055 PF08421 Putative zinc binding domain SRIM_RS30055 PF08484 C-methyltransferase C-terminal domain SRIM_RS30060 PF06722 Protein of unknown function (DUF1205) SRIM_RS30065 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SRIM_RS30085 PF00202 Aminotransferase class-III SRIM_RS30105 PF00171 Aldehyde dehydrogenase family SRIM_RS30110 PF07730 Histidine kinase SRIM_RS30115 PF00072 Response regulator receiver domain SRIM_RS30115 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS30120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS30120 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS30120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS30130 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SRIM_RS30130 PF13288 DXP reductoisomerase C-terminal domain SRIM_RS30130 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SRIM_RS30135 PF02163 Peptidase family M50 SRIM_RS30135 PF17820 PDZ domain SRIM_RS30140 PF04551 GcpE protein SRIM_RS30155 PF04073 Aminoacyl-tRNA editing domain SRIM_RS30155 PF03129 Anticodon binding domain SRIM_RS30155 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SRIM_RS30160 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase SRIM_RS30175 PF17384 RimP C-terminal SH3 domain SRIM_RS30175 PF02576 RimP N-terminal domain SRIM_RS30180 PF13184 NusA-like KH domain SRIM_RS30180 PF08529 NusA N-terminal domain SRIM_RS30190 PF00009 Elongation factor Tu GTP binding domain SRIM_RS30190 PF04760 Translation initiation factor IF-2, N-terminal region SRIM_RS30190 PF11987 Translation-initiation factor 2 SRIM_RS30200 PF02033 Ribosome-binding factor A SRIM_RS30205 PF01509 TruB family pseudouridylate synthase (N terminal domain) SRIM_RS30205 PF09142 tRNA Pseudouridine synthase II, C terminal SRIM_RS30205 PF16198 tRNA pseudouridylate synthase B C-terminal domain SRIM_RS30210 PF06574 FAD synthetase SRIM_RS30210 PF01687 Riboflavin kinase SRIM_RS30215 PF10609 NUBPL iron-transfer P-loop NTPase SRIM_RS30230 PF05108 Type VII secretion system ESX-1, transport TM domain B SRIM_RS30245 PF05922 Peptidase inhibitor I9 SRIM_RS30245 PF00082 Subtilase family SRIM_RS30260 PF00082 Subtilase family SRIM_RS30335 PF01580 FtsK/SpoIIIE family SRIM_RS30345 PF00312 Ribosomal protein S15 SRIM_RS30350 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SRIM_RS30350 PF00575 S1 RNA binding domain SRIM_RS30350 PF00013 KH domain SRIM_RS30350 PF01138 3' exoribonuclease family, domain 1 SRIM_RS30355 PF00675 Insulinase (Peptidase family M16) SRIM_RS30355 PF05193 Peptidase M16 inactive domain SRIM_RS30360 PF05173 Dihydrodipicolinate reductase, C-terminus SRIM_RS30360 PF01113 Dihydrodipicolinate reductase, N-terminus SRIM_RS30380 PF02511 Thymidylate synthase complementing protein SRIM_RS30385 PF00701 Dihydrodipicolinate synthetase family SRIM_RS30390 PF17770 Ribonuclease J C-terminal domain SRIM_RS30390 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SRIM_RS30390 PF12706 Beta-lactamase superfamily domain SRIM_RS30410 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SRIM_RS30420 PF00672 HAMP domain SRIM_RS30420 PF07228 Stage II sporulation protein E (SpoIIE) SRIM_RS30425 PF00672 HAMP domain SRIM_RS30425 PF01627 Hpt domain SRIM_RS30425 PF00072 Response regulator receiver domain SRIM_RS30425 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS30425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS30425 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SRIM_RS30430 PF00072 Response regulator receiver domain SRIM_RS30435 PF01580 FtsK/SpoIIIE family SRIM_RS30435 PF17854 FtsK alpha domain SRIM_RS30435 PF09397 Ftsk gamma domain SRIM_RS30445 PF04055 Radical SAM superfamily SRIM_RS30445 PF18693 TRAM domain SRIM_RS30445 PF00919 Uncharacterized protein family UPF0004 SRIM_RS30450 PF01066 CDP-alcohol phosphatidyltransferase SRIM_RS30455 PF02464 Competence-damaged protein SRIM_RS30455 PF18146 Damage-inducible protein CinA KH domain SRIM_RS30455 PF00994 Probable molybdopterin binding domain SRIM_RS30465 PF00210 Ferritin-like domain SRIM_RS30485 PF03900 Porphobilinogen deaminase, C-terminal domain SRIM_RS30485 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SRIM_RS30495 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SRIM_RS30495 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SRIM_RS30500 PF08494 DEAD/H associated SRIM_RS30500 PF00270 DEAD/DEAH box helicase SRIM_RS30500 PF00271 Helicase conserved C-terminal domain SRIM_RS30505 PF12833 Helix-turn-helix domain SRIM_RS30505 PF02311 AraC-like ligand binding domain SRIM_RS30530 PF01594 AI-2E family transporter SRIM_RS30535 PF03176 MMPL family SRIM_RS30540 PF00154 recA bacterial DNA recombination protein SRIM_RS30545 PF02631 RecX family SRIM_RS30555 PF00581 Rhodanese-like domain SRIM_RS30570 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS30575 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS30580 PF00497 Bacterial extracellular solute-binding proteins, family 3 SRIM_RS30585 PF00005 ABC transporter SRIM_RS30590 PF00072 Response regulator receiver domain SRIM_RS30590 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS30595 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS30595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS30595 PF00672 HAMP domain SRIM_RS30600 PF00313 'Cold-shock' DNA-binding domain SRIM_RS30605 PF00271 Helicase conserved C-terminal domain SRIM_RS30605 PF00270 DEAD/DEAH box helicase SRIM_RS30605 PF12300 ATP-dependent RNA helicase RhlB SRIM_RS30615 PF04055 Radical SAM superfamily SRIM_RS30615 PF00919 Uncharacterized protein family UPF0004 SRIM_RS30645 PF01678 Diaminopimelate epimerase SRIM_RS30650 PF02824 TGS domain SRIM_RS30650 PF04607 Region found in RelA / SpoT proteins SRIM_RS30650 PF13291 ACT domain SRIM_RS30660 PF16360 GTP-binding GTPase Middle Region SRIM_RS30660 PF13167 GTP-binding GTPase N-terminal SRIM_RS30660 PF01926 50S ribosome-binding GTPase SRIM_RS30670 PF00202 Aminotransferase class-III SRIM_RS30675 PF06276 Ferric iron reductase FhuF-like transporter SRIM_RS30675 PF04183 IucA / IucC family SRIM_RS30685 PF06276 Ferric iron reductase FhuF-like transporter SRIM_RS30685 PF04183 IucA / IucC family SRIM_RS30690 PF13307 Helicase C-terminal domain SRIM_RS30695 PF01726 LexA DNA binding domain SRIM_RS30695 PF00717 Peptidase S24-like SRIM_RS30700 PF03477 ATP cone domain SRIM_RS30705 PF08471 Class II vitamin B12-dependent ribonucleotide reductase SRIM_RS30705 PF02867 Ribonucleotide reductase, barrel domain SRIM_RS30720 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS30720 PF13977 BetI-type transcriptional repressor, C-terminal SRIM_RS30725 PF01425 Amidase SRIM_RS30740 PF00005 ABC transporter SRIM_RS30755 PF01351 Ribonuclease HII SRIM_RS30770 PF16124 RecQ zinc-binding SRIM_RS30770 PF00570 HRDC domain SRIM_RS30770 PF00271 Helicase conserved C-terminal domain SRIM_RS30770 PF00270 DEAD/DEAH box helicase SRIM_RS30770 PF09382 RQC domain SRIM_RS30785 PF00293 NUDIX domain SRIM_RS30790 PF00005 ABC transporter SRIM_RS30795 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS30795 PF07729 FCD domain SRIM_RS30800 PF04545 Sigma-70, region 4 SRIM_RS30800 PF04542 Sigma-70 region 2 SRIM_RS30800 PF04539 Sigma-70 region 3 SRIM_RS30800 PF00140 Sigma-70 factor, region 1.2 SRIM_RS30805 PF00089 Trypsin SRIM_RS30815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS30815 PF01751 Toprim domain SRIM_RS30815 PF00986 DNA gyrase B subunit, carboxyl terminus SRIM_RS30815 PF00204 DNA gyrase B SRIM_RS30825 PF07730 Histidine kinase SRIM_RS30830 PF00072 Response regulator receiver domain SRIM_RS30830 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS30835 PF12431 Transcriptional regulator SRIM_RS30835 PF00072 Response regulator receiver domain SRIM_RS30840 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SRIM_RS30840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS30840 PF00989 PAS fold SRIM_RS30840 PF17203 Single cache domain 3 SRIM_RS30850 PF01546 Peptidase family M20/M25/M40 SRIM_RS30850 PF07687 Peptidase dimerisation domain SRIM_RS30860 PF00285 Citrate synthase, C-terminal domain SRIM_RS30865 PF00285 Citrate synthase, C-terminal domain SRIM_RS30870 PF02492 CobW/HypB/UreG, nucleotide-binding domain SRIM_RS30870 PF07683 Cobalamin synthesis protein cobW C-terminal domain SRIM_RS30875 PF03989 DNA gyrase C-terminal domain, beta-propeller SRIM_RS30875 PF00521 DNA gyrase/topoisomerase IV, subunit A SRIM_RS30880 PF05193 Peptidase M16 inactive domain SRIM_RS30880 PF00675 Insulinase (Peptidase family M16) SRIM_RS30895 PF01551 Peptidase family M23 SRIM_RS30900 PF07729 FCD domain SRIM_RS30900 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS30905 PF00381 PTS HPr component phosphorylation site SRIM_RS30910 PF13607 Succinyl-CoA ligase like flavodoxin domain SRIM_RS30910 PF13380 CoA binding domain SRIM_RS30925 PF00265 Thymidine kinase SRIM_RS30935 PF00581 Rhodanese-like domain SRIM_RS30940 PF11268 Protein of unknown function (DUF3071) SRIM_RS30950 PF04030 D-arabinono-1,4-lactone oxidase SRIM_RS30950 PF01565 FAD binding domain SRIM_RS30960 PF00762 Ferrochelatase SRIM_RS30965 PF00459 Inositol monophosphatase family SRIM_RS30975 PF00072 Response regulator receiver domain SRIM_RS30975 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS30980 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS30980 PF00672 HAMP domain SRIM_RS30980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS31005 PF00692 dUTPase SRIM_RS31020 PF03814 Potassium-transporting ATPase A subunit SRIM_RS31030 PF02669 K+-transporting ATPase, c chain SRIM_RS31040 PF00005 ABC transporter SRIM_RS31040 PF02687 FtsX-like permease family SRIM_RS31040 PF12704 MacB-like periplasmic core domain SRIM_RS31050 PF13493 Domain of unknown function (DUF4118) SRIM_RS31050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS31050 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS31050 PF02702 Osmosensitive K+ channel His kinase sensor domain SRIM_RS31050 PF00582 Universal stress protein family SRIM_RS31055 PF00072 Response regulator receiver domain SRIM_RS31055 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS31070 PF02080 TrkA-C domain SRIM_RS31070 PF02254 TrkA-N domain SRIM_RS31075 PF02080 TrkA-C domain SRIM_RS31075 PF02254 TrkA-N domain SRIM_RS31105 PF13520 Amino acid permease SRIM_RS31110 PF01938 TRAM domain SRIM_RS31110 PF05958 tRNA (Uracil-5-)-methyltransferase SRIM_RS31125 PF00501 AMP-binding enzyme SRIM_RS31125 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS31125 PF00668 Condensation domain SRIM_RS31125 PF00550 Phosphopantetheine attachment site SRIM_RS31125 PF00975 Thioesterase domain SRIM_RS31130 PF00550 Phosphopantetheine attachment site SRIM_RS31130 PF00501 AMP-binding enzyme SRIM_RS31130 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS31130 PF00975 Thioesterase domain SRIM_RS31130 PF00668 Condensation domain SRIM_RS31135 PF00550 Phosphopantetheine attachment site SRIM_RS31135 PF00668 Condensation domain SRIM_RS31135 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS31135 PF00501 AMP-binding enzyme SRIM_RS31140 PF00975 Thioesterase domain SRIM_RS31140 PF00501 AMP-binding enzyme SRIM_RS31140 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS31140 PF00668 Condensation domain SRIM_RS31140 PF00550 Phosphopantetheine attachment site SRIM_RS31145 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SRIM_RS31145 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SRIM_RS31150 PF01474 Class-II DAHP synthetase family SRIM_RS31155 PF00425 chorismate binding enzyme SRIM_RS31155 PF04715 Anthranilate synthase component I, N terminal region SRIM_RS31160 PF00117 Glutamine amidotransferase class-I SRIM_RS31160 PF02885 Glycosyl transferase family, helical bundle domain SRIM_RS31160 PF00591 Glycosyl transferase family, a/b domain SRIM_RS31165 PF00155 Aminotransferase class I and II SRIM_RS31165 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS31170 PF00591 Glycosyl transferase family, a/b domain SRIM_RS31170 PF02885 Glycosyl transferase family, helical bundle domain SRIM_RS31175 PF00218 Indole-3-glycerol phosphate synthase SRIM_RS31180 PF08502 LeuA allosteric (dimerisation) domain SRIM_RS31180 PF00682 HMGL-like SRIM_RS31190 PF01613 Flavin reductase like domain SRIM_RS31200 PF04820 Tryptophan halogenase SRIM_RS31205 PF00975 Thioesterase domain SRIM_RS31210 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS31210 PF00668 Condensation domain SRIM_RS31210 PF00550 Phosphopantetheine attachment site SRIM_RS31210 PF00501 AMP-binding enzyme SRIM_RS31215 PF00550 Phosphopantetheine attachment site SRIM_RS31215 PF07993 Male sterility protein SRIM_RS31215 PF00668 Condensation domain SRIM_RS31215 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS31215 PF00501 AMP-binding enzyme SRIM_RS31220 PF00550 Phosphopantetheine attachment site SRIM_RS31220 PF00501 AMP-binding enzyme SRIM_RS31220 PF00975 Thioesterase domain SRIM_RS31220 PF00668 Condensation domain SRIM_RS31220 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS31235 PF00005 ABC transporter SRIM_RS31235 PF02687 FtsX-like permease family SRIM_RS31235 PF12704 MacB-like periplasmic core domain SRIM_RS31245 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS31245 PF00072 Response regulator receiver domain SRIM_RS31255 PF02668 Taurine catabolism dioxygenase TauD, TfdA family SRIM_RS31260 PF00155 Aminotransferase class I and II SRIM_RS31265 PF00694 Aconitase C-terminal domain SRIM_RS31270 PF00330 Aconitase family (aconitate hydratase) SRIM_RS31285 PF00005 ABC transporter SRIM_RS31285 PF08402 TOBE domain SRIM_RS31325 PF00067 Cytochrome P450 SRIM_RS31330 PF00155 Aminotransferase class I and II SRIM_RS31350 PF00067 Cytochrome P450 SRIM_RS31390 PF04101 Glycosyltransferase family 28 C-terminal domain SRIM_RS31390 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase SRIM_RS31395 PF00005 ABC transporter SRIM_RS31400 PF01497 Periplasmic binding protein SRIM_RS31410 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS31410 PF00975 Thioesterase domain SRIM_RS31410 PF00501 AMP-binding enzyme SRIM_RS31410 PF00550 Phosphopantetheine attachment site SRIM_RS31410 PF00668 Condensation domain SRIM_RS31415 PF07690 Major Facilitator Superfamily SRIM_RS31420 PF11806 Domain of unknown function (DUF3327) SRIM_RS31420 PF00756 Putative esterase SRIM_RS31425 PF01032 FecCD transport family SRIM_RS31430 PF00106 short chain dehydrogenase SRIM_RS31435 PF00425 chorismate binding enzyme SRIM_RS31440 PF00501 AMP-binding enzyme SRIM_RS31440 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS31445 PF00857 Isochorismatase family SRIM_RS31445 PF00550 Phosphopantetheine attachment site SRIM_RS31450 PF00857 Isochorismatase family SRIM_RS31450 PF00550 Phosphopantetheine attachment site SRIM_RS31460 PF13519 von Willebrand factor type A domain SRIM_RS31470 PF11066 Protein of unknown function (DUF2867) SRIM_RS31470 PF13460 NAD(P)H-binding SRIM_RS31475 PF00144 Beta-lactamase SRIM_RS31480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS31480 PF03466 LysR substrate binding domain SRIM_RS31485 PF00484 Carbonic anhydrase SRIM_RS31490 PF02560 Cyanate lyase C-terminal domain SRIM_RS31500 PF00561 alpha/beta hydrolase fold SRIM_RS31505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SRIM_RS31505 PF02142 MGS-like domain SRIM_RS31505 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SRIM_RS31515 PF00291 Pyridoxal-phosphate dependent enzyme SRIM_RS31520 PF13378 Enolase C-terminal domain-like SRIM_RS31520 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SRIM_RS31525 PF07690 Major Facilitator Superfamily SRIM_RS31535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SRIM_RS31540 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS31545 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS31545 PF12911 N-terminal TM domain of oligopeptide transport permease C SRIM_RS31550 PF00005 ABC transporter SRIM_RS31550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SRIM_RS31560 PF01636 Phosphotransferase enzyme family SRIM_RS31570 PF00072 Response regulator receiver domain SRIM_RS31570 PF01339 CheB methylesterase SRIM_RS31590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS31590 PF03466 LysR substrate binding domain SRIM_RS31595 PF07690 Major Facilitator Superfamily SRIM_RS31610 PF00155 Aminotransferase class I and II SRIM_RS31615 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS31615 PF00501 AMP-binding enzyme SRIM_RS31620 PF00221 Aromatic amino acid lyase SRIM_RS31635 PF02142 MGS-like domain SRIM_RS31635 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SRIM_RS31635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SRIM_RS31640 PF00355 Rieske [2Fe-2S] domain SRIM_RS31655 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SRIM_RS31655 PF02142 MGS-like domain SRIM_RS31655 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SRIM_RS31660 PF06508 Queuosine biosynthesis protein QueC SRIM_RS31670 PF04055 Radical SAM superfamily SRIM_RS31675 PF01227 GTP cyclohydrolase I SRIM_RS31685 PF01544 CorA-like Mg2+ transporter protein SRIM_RS31690 PF04472 Cell division protein SepF SRIM_RS31730 PF07228 Stage II sporulation protein E (SpoIIE) SRIM_RS31730 PF00672 HAMP domain SRIM_RS31745 PF00149 Calcineurin-like phosphoesterase SRIM_RS31755 PF00156 Phosphoribosyl transferase domain SRIM_RS31755 PF05139 Erythromycin esterase SRIM_RS31765 PF00664 ABC transporter transmembrane region SRIM_RS31765 PF00005 ABC transporter SRIM_RS31770 PF14028 Lantibiotic biosynthesis dehydratase C-term SRIM_RS31770 PF04738 Lantibiotic dehydratase, N terminus SRIM_RS31785 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS31785 PF00072 Response regulator receiver domain SRIM_RS31860 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SRIM_RS31860 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SRIM_RS31865 PF13520 Amino acid permease SRIM_RS31870 PF00378 Enoyl-CoA hydratase/isomerase SRIM_RS31875 PF01494 FAD binding domain SRIM_RS31880 PF03756 A-factor biosynthesis hotdog domain SRIM_RS31885 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS31890 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS31895 PF13419 Haloacid dehalogenase-like hydrolase SRIM_RS31905 PF00501 AMP-binding enzyme SRIM_RS31905 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS31910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS31910 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS31910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS31920 PF00378 Enoyl-CoA hydratase/isomerase SRIM_RS31925 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SRIM_RS31925 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SRIM_RS31930 PF00378 Enoyl-CoA hydratase/isomerase SRIM_RS31935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS31935 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS31935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS31940 PF00171 Aldehyde dehydrogenase family SRIM_RS31945 PF09856 Predicted transcriptional regulator (DUF2083) SRIM_RS31945 PF06114 IrrE N-terminal-like domain SRIM_RS31945 PF01381 Helix-turn-helix SRIM_RS31960 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS31960 PF00107 Zinc-binding dehydrogenase SRIM_RS31970 PF00202 Aminotransferase class-III SRIM_RS31980 PF00455 DeoR C terminal sensor domain SRIM_RS31980 PF08220 DeoR-like helix-turn-helix domain SRIM_RS31985 PF07690 Major Facilitator Superfamily SRIM_RS32000 PF00929 Exonuclease SRIM_RS32005 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SRIM_RS32020 PF12697 Alpha/beta hydrolase family SRIM_RS32030 PF01032 FecCD transport family SRIM_RS32035 PF01497 Periplasmic binding protein SRIM_RS32040 PF00005 ABC transporter SRIM_RS32050 PF00330 Aconitase family (aconitate hydratase) SRIM_RS32050 PF00694 Aconitase C-terminal domain SRIM_RS32065 PF01547 Bacterial extracellular solute-binding protein SRIM_RS32070 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS32085 PF13407 Periplasmic binding protein domain SRIM_RS32090 PF00005 ABC transporter SRIM_RS32095 PF02653 Branched-chain amino acid transport system / permease component SRIM_RS32100 PF02780 Transketolase, C-terminal domain SRIM_RS32100 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SRIM_RS32100 PF02779 Transketolase, pyrimidine binding domain SRIM_RS32105 PF13520 Amino acid permease SRIM_RS32115 PF00293 NUDIX domain SRIM_RS32115 PF03099 Biotin/lipoate A/B protein ligase family SRIM_RS32120 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SRIM_RS32120 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SRIM_RS32120 PF00378 Enoyl-CoA hydratase/isomerase SRIM_RS32125 PF02803 Thiolase, C-terminal domain SRIM_RS32125 PF00108 Thiolase, N-terminal domain SRIM_RS32135 PF01612 3'-5' exonuclease SRIM_RS32135 PF00570 HRDC domain SRIM_RS32150 PF01208 Uroporphyrinogen decarboxylase (URO-D) SRIM_RS32155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SRIM_RS32155 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS32160 PF00171 Aldehyde dehydrogenase family SRIM_RS32170 PF02803 Thiolase, C-terminal domain SRIM_RS32170 PF00108 Thiolase, N-terminal domain SRIM_RS32180 PF01593 Flavin containing amine oxidoreductase SRIM_RS32185 PF06778 Chlorite dismutase SRIM_RS32190 PF00561 alpha/beta hydrolase fold SRIM_RS32210 PF05114 Protein of unknown function (DUF692) SRIM_RS32215 PF01810 LysE type translocator SRIM_RS32225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS32225 PF03466 LysR substrate binding domain SRIM_RS32230 PF17074 Darcynin, domain of unknown function SRIM_RS32245 PF13732 Domain of unknown function (DUF4162) SRIM_RS32245 PF00005 ABC transporter SRIM_RS32275 PF00005 ABC transporter SRIM_RS32280 PF02687 FtsX-like permease family SRIM_RS32285 PF07730 Histidine kinase SRIM_RS32290 PF00072 Response regulator receiver domain SRIM_RS32290 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS32295 PF08245 Mur ligase middle domain SRIM_RS32295 PF01225 Mur ligase family, catalytic domain SRIM_RS32295 PF02875 Mur ligase family, glutamate ligase domain SRIM_RS32300 PF01641 SelR domain SRIM_RS32305 PF00149 Calcineurin-like phosphoesterase SRIM_RS32310 PF17853 GGDEF-like domain SRIM_RS32310 PF13556 PucR C-terminal helix-turn-helix domain SRIM_RS32315 PF01965 DJ-1/PfpI family SRIM_RS32320 PF11941 Domain of unknown function (DUF3459) SRIM_RS32320 PF00128 Alpha amylase, catalytic domain SRIM_RS32345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SRIM_RS32345 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS32350 PF03466 LysR substrate binding domain SRIM_RS32350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS32355 PF04951 D-aminopeptidase SRIM_RS32360 PF00128 Alpha amylase, catalytic domain SRIM_RS32365 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SRIM_RS32365 PF00128 Alpha amylase, catalytic domain SRIM_RS32390 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS32405 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS32410 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS32415 PF01547 Bacterial extracellular solute-binding protein SRIM_RS32420 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase SRIM_RS32425 PF05922 Peptidase inhibitor I9 SRIM_RS32425 PF00082 Subtilase family SRIM_RS32430 PF00535 Glycosyl transferase family 2 SRIM_RS32440 PF01467 Cytidylyltransferase-like SRIM_RS32440 PF00294 pfkB family carbohydrate kinase SRIM_RS32445 PF13580 SIS domain SRIM_RS32450 PF00534 Glycosyl transferases group 1 SRIM_RS32450 PF13439 Glycosyltransferase Family 4 SRIM_RS32475 PF02543 Carbamoyltransferase N-terminus SRIM_RS32475 PF16861 Carbamoyltransferase C-terminus SRIM_RS32480 PF16363 GDP-mannose 4,6 dehydratase SRIM_RS32490 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SRIM_RS32520 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SRIM_RS32520 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SRIM_RS32545 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS32550 PF00005 ABC transporter SRIM_RS32565 PF00009 Elongation factor Tu GTP binding domain SRIM_RS32570 PF01507 Phosphoadenosine phosphosulfate reductase family SRIM_RS32580 PF01507 Phosphoadenosine phosphosulfate reductase family SRIM_RS32590 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SRIM_RS32590 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SRIM_RS32615 PF18158 Adaptive response protein AidB N-terminal domain SRIM_RS32615 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS32615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS32665 PF09339 IclR helix-turn-helix domain SRIM_RS32665 PF01614 Bacterial transcriptional regulator SRIM_RS32670 PF01144 Coenzyme A transferase SRIM_RS32675 PF01144 Coenzyme A transferase SRIM_RS32680 PF00108 Thiolase, N-terminal domain SRIM_RS32680 PF02803 Thiolase, C-terminal domain SRIM_RS32685 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal SRIM_RS32685 PF00775 Dioxygenase SRIM_RS32690 PF00775 Dioxygenase SRIM_RS32690 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal SRIM_RS32695 PF10397 Adenylosuccinate lyase C-terminus SRIM_RS32695 PF00206 Lyase SRIM_RS32700 PF02627 Carboxymuconolactone decarboxylase family SRIM_RS32705 PF01494 FAD binding domain SRIM_RS32710 PF00557 Metallopeptidase family M24 SRIM_RS32720 PF01068 ATP dependent DNA ligase domain SRIM_RS32720 PF13298 DNA polymerase Ligase (LigD) SRIM_RS32720 PF04679 ATP dependent DNA ligase C terminal region SRIM_RS32735 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SRIM_RS32735 PF00205 Thiamine pyrophosphate enzyme, central domain SRIM_RS32735 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SRIM_RS32740 PF13419 Haloacid dehalogenase-like hydrolase SRIM_RS32750 PF13823 Alcohol dehydrogenase GroES-associated SRIM_RS32750 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS32750 PF00107 Zinc-binding dehydrogenase SRIM_RS32770 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS32785 PF00931 NB-ARC domain SRIM_RS32785 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS32785 PF03704 Bacterial transcriptional activator domain SRIM_RS32790 PF00271 Helicase conserved C-terminal domain SRIM_RS32820 PF03193 RsgA GTPase SRIM_RS32825 PF02805 Metal binding domain of Ada SRIM_RS32825 PF06029 AlkA N-terminal domain SRIM_RS32825 PF00730 HhH-GPD superfamily base excision DNA repair protein SRIM_RS32825 PF12833 Helix-turn-helix domain SRIM_RS32835 PF00205 Thiamine pyrophosphate enzyme, central domain SRIM_RS32835 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SRIM_RS32835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SRIM_RS32855 PF07729 FCD domain SRIM_RS32855 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS32870 PF13556 PucR C-terminal helix-turn-helix domain SRIM_RS32870 PF17853 GGDEF-like domain SRIM_RS32875 PF00941 FAD binding domain in molybdopterin dehydrogenase SRIM_RS32875 PF03450 CO dehydrogenase flavoprotein C-terminal domain SRIM_RS32880 PF00111 2Fe-2S iron-sulfur cluster binding domain SRIM_RS32880 PF01799 [2Fe-2S] binding domain SRIM_RS32885 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SRIM_RS32885 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SRIM_RS32890 PF00860 Permease family SRIM_RS32905 PF07690 Major Facilitator Superfamily SRIM_RS32910 PF01638 HxlR-like helix-turn-helix SRIM_RS32920 PF00689 Cation transporting ATPase, C-terminus SRIM_RS32920 PF00690 Cation transporter/ATPase, N-terminus SRIM_RS32925 PF02308 MgtC family SRIM_RS32930 PF17668 Acetyltransferase (GNAT) domain SRIM_RS32930 PF13530 Sterol carrier protein domain SRIM_RS32935 PF03466 LysR substrate binding domain SRIM_RS32935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS32950 PF13185 GAF domain SRIM_RS32950 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS32955 PF00501 AMP-binding enzyme SRIM_RS32955 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS32960 PF00501 AMP-binding enzyme SRIM_RS32960 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS32975 PF00583 Acetyltransferase (GNAT) family SRIM_RS32990 PF00005 ABC transporter SRIM_RS33000 PF00199 Catalase SRIM_RS33000 PF06628 Catalase-related immune-responsive SRIM_RS33010 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SRIM_RS33010 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SRIM_RS33015 PF01261 Xylose isomerase-like TIM barrel SRIM_RS33035 PF00576 HIUase/Transthyretin family SRIM_RS33040 PF01014 Uricase SRIM_RS33045 PF00860 Permease family SRIM_RS33050 PF01979 Amidohydrolase family SRIM_RS33055 PF00860 Permease family SRIM_RS33060 PF01374 Glycosyl hydrolase family 46 SRIM_RS33075 PF01494 FAD binding domain SRIM_RS33080 PF03606 C4-dicarboxylate anaerobic carrier SRIM_RS33090 PF01274 Malate synthase SRIM_RS33105 PF01614 Bacterial transcriptional regulator SRIM_RS33105 PF09339 IclR helix-turn-helix domain SRIM_RS33110 PF01979 Amidohydrolase family SRIM_RS33115 PF04229 GrpB protein SRIM_RS33115 PF01121 Dephospho-CoA kinase SRIM_RS33140 PF07555 beta-N-acetylglucosaminidase SRIM_RS33140 PF00041 Fibronectin type III domain SRIM_RS33140 PF00754 F5/8 type C domain SRIM_RS33140 PF00963 Cohesin domain SRIM_RS33140 PF02838 Glycosyl hydrolase family 20, domain 2 SRIM_RS33155 PF00545 ribonuclease SRIM_RS33160 PF01081 KDPG and KHG aldolase SRIM_RS33165 PF00067 Cytochrome P450 SRIM_RS33170 PF00497 Bacterial extracellular solute-binding proteins, family 3 SRIM_RS33175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SRIM_RS33180 PF13411 MerR HTH family regulatory protein SRIM_RS33185 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS33185 PF07702 UTRA domain SRIM_RS33190 PF13407 Periplasmic binding protein domain SRIM_RS33200 PF02653 Branched-chain amino acid transport system / permease component SRIM_RS33205 PF00005 ABC transporter SRIM_RS33210 PF00480 ROK family SRIM_RS33225 PF03466 LysR substrate binding domain SRIM_RS33225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS33230 PF01042 Endoribonuclease L-PSP SRIM_RS33255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS33255 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS33255 PF02702 Osmosensitive K+ channel His kinase sensor domain SRIM_RS33255 PF00582 Universal stress protein family SRIM_RS33255 PF13493 Domain of unknown function (DUF4118) SRIM_RS33265 PF07690 Major Facilitator Superfamily SRIM_RS33290 PF03664 Glycosyl hydrolase family 62 SRIM_RS33290 PF00652 Ricin-type beta-trefoil lectin domain SRIM_RS33295 PF03442 Carbohydrate binding domain X2 SRIM_RS33295 PF00942 Cellulose binding domain SRIM_RS33300 PF10431 C-terminal, D2-small domain, of ClpB protein SRIM_RS33300 PF02861 Clp amino terminal domain, pathogenicity island component SRIM_RS33300 PF17871 AAA lid domain SRIM_RS33300 PF00004 ATPase family associated with various cellular activities (AAA) SRIM_RS33300 PF07724 AAA domain (Cdc48 subfamily) SRIM_RS33305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS33305 PF03466 LysR substrate binding domain SRIM_RS33310 PF00459 Inositol monophosphatase family SRIM_RS33320 PF02627 Carboxymuconolactone decarboxylase family SRIM_RS33350 PF00005 ABC transporter SRIM_RS33355 PF00497 Bacterial extracellular solute-binding proteins, family 3 SRIM_RS33360 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS33365 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS33375 PF00042 Globin SRIM_RS33375 PF00970 Oxidoreductase FAD-binding domain SRIM_RS33375 PF00175 Oxidoreductase NAD-binding domain SRIM_RS33380 PF02082 Transcriptional regulator SRIM_RS33400 PF00135 Carboxylesterase family SRIM_RS33420 PF01425 Amidase SRIM_RS33430 PF00857 Isochorismatase family SRIM_RS33435 PF07690 Major Facilitator Superfamily SRIM_RS33460 PF00355 Rieske [2Fe-2S] domain SRIM_RS33460 PF01266 FAD dependent oxidoreductase SRIM_RS33470 PF00795 Carbon-nitrogen hydrolase SRIM_RS33475 PF00202 Aminotransferase class-III SRIM_RS33480 PF00313 'Cold-shock' DNA-binding domain SRIM_RS33485 PF00107 Zinc-binding dehydrogenase SRIM_RS33485 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS33495 PF02342 TerD domain SRIM_RS33500 PF02342 TerD domain SRIM_RS33505 PF01979 Amidohydrolase family SRIM_RS33515 PF01266 FAD dependent oxidoreductase SRIM_RS33525 PF03099 Biotin/lipoate A/B protein ligase family SRIM_RS33525 PF10437 Bacterial lipoate protein ligase C-terminus SRIM_RS33530 PF02146 Sir2 family SRIM_RS33540 PF00459 Inositol monophosphatase family SRIM_RS33555 PF00175 Oxidoreductase NAD-binding domain SRIM_RS33555 PF00111 2Fe-2S iron-sulfur cluster binding domain SRIM_RS33575 PF01661 Macro domain SRIM_RS33585 PF02805 Metal binding domain of Ada SRIM_RS33585 PF06029 AlkA N-terminal domain SRIM_RS33585 PF00730 HhH-GPD superfamily base excision DNA repair protein SRIM_RS33585 PF12833 Helix-turn-helix domain SRIM_RS33590 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SRIM_RS33590 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SRIM_RS33610 PF00264 Common central domain of tyrosinase SRIM_RS33625 PF02028 BCCT, betaine/carnitine/choline family transporter SRIM_RS33630 PF02595 Glycerate kinase family SRIM_RS33640 PF02666 Phosphatidylserine decarboxylase SRIM_RS33645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS33645 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS33645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS33655 PF03328 HpcH/HpaI aldolase/citrate lyase family SRIM_RS33660 PF02310 B12 binding domain SRIM_RS33660 PF01642 Methylmalonyl-CoA mutase SRIM_RS33665 PF00107 Zinc-binding dehydrogenase SRIM_RS33665 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS33670 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS33670 PF17754 MftR C-terminal domain SRIM_RS33675 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SRIM_RS33675 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SRIM_RS33685 PF00583 Acetyltransferase (GNAT) family SRIM_RS33695 PF07739 TipAS antibiotic-recognition domain SRIM_RS33695 PF13411 MerR HTH family regulatory protein SRIM_RS33700 PF04055 Radical SAM superfamily SRIM_RS33720 PF12833 Helix-turn-helix domain SRIM_RS33725 PF08448 PAS fold SRIM_RS33725 PF13581 Histidine kinase-like ATPase domain SRIM_RS33725 PF07228 Stage II sporulation protein E (SpoIIE) SRIM_RS33725 PF13466 STAS domain SRIM_RS33740 PF04951 D-aminopeptidase SRIM_RS33745 PF07687 Peptidase dimerisation domain SRIM_RS33745 PF01546 Peptidase family M20/M25/M40 SRIM_RS33755 PF17676 LD-carboxypeptidase C-terminal domain SRIM_RS33755 PF02016 LD-carboxypeptidase N-terminal domain SRIM_RS33770 PF00067 Cytochrome P450 SRIM_RS33790 PF02515 CoA-transferase family III SRIM_RS33795 PF13302 Acetyltransferase (GNAT) domain SRIM_RS33810 PF00491 Arginase family SRIM_RS33825 PF13427 Domain of unknown function (DUF4111) SRIM_RS33825 PF18765 Polymerase beta, Nucleotidyltransferase SRIM_RS33835 PF00067 Cytochrome P450 SRIM_RS33850 PF08990 Erythronolide synthase docking SRIM_RS33850 PF09277 Erythronolide synthase, docking SRIM_RS33850 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS33850 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS33850 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS33850 PF08659 KR domain SRIM_RS33850 PF00550 Phosphopantetheine attachment site SRIM_RS33850 PF14765 Polyketide synthase dehydratase SRIM_RS33850 PF00698 Acyl transferase domain SRIM_RS33850 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS33865 PF01209 ubiE/COQ5 methyltransferase family SRIM_RS33870 PF01569 PAP2 superfamily SRIM_RS33875 PF00571 CBS domain SRIM_RS33885 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SRIM_RS33885 PF13378 Enolase C-terminal domain-like SRIM_RS33890 PF04542 Sigma-70 region 2 SRIM_RS33890 PF04539 Sigma-70 region 3 SRIM_RS33890 PF04545 Sigma-70, region 4 SRIM_RS33915 PF12706 Beta-lactamase superfamily domain SRIM_RS33925 PF12706 Beta-lactamase superfamily domain SRIM_RS33930 PF03466 LysR substrate binding domain SRIM_RS33930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS33935 PF00296 Luciferase-like monooxygenase SRIM_RS33940 PF08028 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS33940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS33940 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS33945 PF03358 NADPH-dependent FMN reductase SRIM_RS33955 PF00296 Luciferase-like monooxygenase SRIM_RS33965 PF13520 Amino acid permease SRIM_RS33975 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS33980 PF13411 MerR HTH family regulatory protein SRIM_RS33985 PF01494 FAD binding domain SRIM_RS34010 PF08281 Sigma-70, region 4 SRIM_RS34010 PF04542 Sigma-70 region 2 SRIM_RS34015 PF01134 Glucose inhibited division protein A SRIM_RS34020 PF01329 Pterin 4 alpha carbinolamine dehydratase SRIM_RS34025 PF03631 Virulence factor BrkB SRIM_RS34030 PF04542 Sigma-70 region 2 SRIM_RS34030 PF08281 Sigma-70, region 4 SRIM_RS34075 PF00248 Aldo/keto reductase family SRIM_RS34085 PF00501 AMP-binding enzyme SRIM_RS34105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS34105 PF03466 LysR substrate binding domain SRIM_RS34110 PF13593 SBF-like CPA transporter family (DUF4137) SRIM_RS34115 PF03144 Elongation factor Tu domain 2 SRIM_RS34115 PF03143 Elongation factor Tu C-terminal domain SRIM_RS34115 PF00009 Elongation factor Tu GTP binding domain SRIM_RS34135 PF13859 BNR repeat-like domain SRIM_RS34135 PF14873 N-terminal domain of BNR-repeat neuraminidase SRIM_RS34140 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS34140 PF00107 Zinc-binding dehydrogenase SRIM_RS34150 PF02634 FdhD/NarQ family SRIM_RS34155 PF01494 FAD binding domain SRIM_RS34160 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS34160 PF07729 FCD domain SRIM_RS34175 PF04954 Siderophore-interacting protein SRIM_RS34175 PF08021 Siderophore-interacting FAD-binding domain SRIM_RS34180 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS34205 PF01817 Chorismate mutase type II SRIM_RS34205 PF02153 Prephenate dehydrogenase SRIM_RS34215 PF07690 Major Facilitator Superfamily SRIM_RS34220 PF13607 Succinyl-CoA ligase like flavodoxin domain SRIM_RS34220 PF13380 CoA binding domain SRIM_RS34225 PF02515 CoA-transferase family III SRIM_RS34230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SRIM_RS34230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SRIM_RS34230 PF00205 Thiamine pyrophosphate enzyme, central domain SRIM_RS34245 PF18152 DAHP synthase ferredoxin-like domain SRIM_RS34245 PF00793 DAHP synthetase I family SRIM_RS34255 PF02195 ParB-like nuclease domain SRIM_RS34260 PF00005 ABC transporter SRIM_RS34260 PF00664 ABC transporter transmembrane region SRIM_RS34265 PF00550 Phosphopantetheine attachment site SRIM_RS34265 PF00501 AMP-binding enzyme SRIM_RS34265 PF00668 Condensation domain SRIM_RS34265 PF07993 Male sterility protein SRIM_RS34265 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS34270 PF00501 AMP-binding enzyme SRIM_RS34270 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS34270 PF00668 Condensation domain SRIM_RS34270 PF00550 Phosphopantetheine attachment site SRIM_RS34275 PF00668 Condensation domain SRIM_RS34275 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS34275 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS34275 PF00668 Condensation domain SRIM_RS34275 PF00501 AMP-binding enzyme SRIM_RS34275 PF00501 AMP-binding enzyme SRIM_RS34275 PF00550 Phosphopantetheine attachment site SRIM_RS34275 PF00550 Phosphopantetheine attachment site SRIM_RS34280 PF00668 Condensation domain SRIM_RS34280 PF00550 Phosphopantetheine attachment site SRIM_RS34280 PF00975 Thioesterase domain SRIM_RS34280 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS34280 PF00501 AMP-binding enzyme SRIM_RS34285 PF03621 MbtH-like protein SRIM_RS34290 PF00999 Sodium/hydrogen exchanger family SRIM_RS34295 PF04820 Tryptophan halogenase SRIM_RS34300 PF00067 Cytochrome P450 SRIM_RS34305 PF00067 Cytochrome P450 SRIM_RS34315 PF01070 FMN-dependent dehydrogenase SRIM_RS34320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SRIM_RS34325 PF00155 Aminotransferase class I and II SRIM_RS34330 PF02153 Prephenate dehydrogenase SRIM_RS34335 PF04542 Sigma-70 region 2 SRIM_RS34335 PF08281 Sigma-70, region 4 SRIM_RS34335 PF12680 SnoaL-like domain SRIM_RS34360 PF04185 Phosphoesterase family SRIM_RS34360 PF05506 Domain of unknown function (DUF756) SRIM_RS34365 PF01112 Asparaginase SRIM_RS34370 PF01553 Acyltransferase SRIM_RS34385 PF00975 Thioesterase domain SRIM_RS34400 PF00072 Response regulator receiver domain SRIM_RS34400 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS34405 PF00067 Cytochrome P450 SRIM_RS34425 PF03734 L,D-transpeptidase catalytic domain SRIM_RS34425 PF17964 Bacterial Ig domain SRIM_RS34440 PF00171 Aldehyde dehydrogenase family SRIM_RS34445 PF00501 AMP-binding enzyme SRIM_RS34445 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS34460 PF00069 Protein kinase domain SRIM_RS34460 PF03793 PASTA domain SRIM_RS34480 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading SRIM_RS34490 PF03466 LysR substrate binding domain SRIM_RS34490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS34505 PF02310 B12 binding domain SRIM_RS34505 PF01642 Methylmalonyl-CoA mutase SRIM_RS34510 PF01642 Methylmalonyl-CoA mutase SRIM_RS34535 PF00266 Aminotransferase class-V SRIM_RS34540 PF13847 Methyltransferase domain SRIM_RS34540 PF03551 Transcriptional regulator PadR-like family SRIM_RS34545 PF00206 Lyase SRIM_RS34545 PF10397 Adenylosuccinate lyase C-terminus SRIM_RS34565 PF00732 GMC oxidoreductase SRIM_RS34565 PF05199 GMC oxidoreductase SRIM_RS34575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS34575 PF00672 HAMP domain SRIM_RS34575 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS34580 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS34580 PF00072 Response regulator receiver domain SRIM_RS34585 PF01522 Polysaccharide deacetylase SRIM_RS34590 PF04686 Streptomyces sporulation and cell division protein, SsgA SRIM_RS34605 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS34605 PF13977 BetI-type transcriptional repressor, C-terminal SRIM_RS34615 PF00248 Aldo/keto reductase family SRIM_RS34625 PF04686 Streptomyces sporulation and cell division protein, SsgA SRIM_RS34650 PF01047 MarR family SRIM_RS34660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS34660 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS34660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS34665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS34665 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS34665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS34675 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS34675 PF17932 Tetracyclin repressor-like, C-terminal domain SRIM_RS34680 PF02803 Thiolase, C-terminal domain SRIM_RS34680 PF00108 Thiolase, N-terminal domain SRIM_RS34695 PF01144 Coenzyme A transferase SRIM_RS34700 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SRIM_RS34700 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SRIM_RS34700 PF00378 Enoyl-CoA hydratase/isomerase SRIM_RS34710 PF00106 short chain dehydrogenase SRIM_RS34715 PF00106 short chain dehydrogenase SRIM_RS34725 PF00753 Metallo-beta-lactamase superfamily SRIM_RS34745 PF07690 Major Facilitator Superfamily SRIM_RS34765 PF13613 Helix-turn-helix of DDE superfamily endonuclease SRIM_RS34765 PF01609 Transposase DDE domain SRIM_RS34775 PF08220 DeoR-like helix-turn-helix domain SRIM_RS34775 PF00455 DeoR C terminal sensor domain SRIM_RS34780 PF01116 Fructose-bisphosphate aldolase class-II SRIM_RS34785 PF01380 SIS domain SRIM_RS34790 PF00083 Sugar (and other) transporter SRIM_RS34815 PF00067 Cytochrome P450 SRIM_RS34820 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS34825 PF13302 Acetyltransferase (GNAT) domain SRIM_RS34830 PF04493 Endonuclease V SRIM_RS34835 PF03435 Saccharopine dehydrogenase NADP binding domain SRIM_RS34840 PF00701 Dihydrodipicolinate synthetase family SRIM_RS34845 PF07690 Major Facilitator Superfamily SRIM_RS34855 PF02308 MgtC family SRIM_RS34860 PF02515 CoA-transferase family III SRIM_RS34865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS34865 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS34865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS34870 PF02803 Thiolase, C-terminal domain SRIM_RS34870 PF00108 Thiolase, N-terminal domain SRIM_RS34875 PF00378 Enoyl-CoA hydratase/isomerase SRIM_RS34875 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SRIM_RS34875 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SRIM_RS34880 PF00270 DEAD/DEAH box helicase SRIM_RS34880 PF13749 Putative ATP-dependent DNA helicase recG C-terminal SRIM_RS34880 PF17191 RecG wedge domain SRIM_RS34890 PF00324 Amino acid permease SRIM_RS34895 PF07690 Major Facilitator Superfamily SRIM_RS34910 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS34910 PF00072 Response regulator receiver domain SRIM_RS34915 PF03372 Endonuclease/Exonuclease/phosphatase family SRIM_RS34925 PF01433 Peptidase family M1 domain SRIM_RS34925 PF11838 ERAP1-like C-terminal domain SRIM_RS34930 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SRIM_RS34930 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SRIM_RS34940 PF02028 BCCT, betaine/carnitine/choline family transporter SRIM_RS34945 PF01266 FAD dependent oxidoreductase SRIM_RS34965 PF16921 Tex protein YqgF-like domain SRIM_RS34965 PF09371 Tex-like protein N-terminal domain SRIM_RS34965 PF17674 HHH domain SRIM_RS34965 PF00575 S1 RNA binding domain SRIM_RS34980 PF12833 Helix-turn-helix domain SRIM_RS34980 PF01965 DJ-1/PfpI family SRIM_RS34985 PF01965 DJ-1/PfpI family SRIM_RS35000 PF00378 Enoyl-CoA hydratase/isomerase SRIM_RS35005 PF00005 ABC transporter SRIM_RS35005 PF12848 ABC transporter SRIM_RS35015 PF01047 MarR family SRIM_RS35035 PF00293 NUDIX domain SRIM_RS35040 PF01545 Cation efflux family SRIM_RS35075 PF00005 ABC transporter SRIM_RS35090 PF01593 Flavin containing amine oxidoreductase SRIM_RS35095 PF00348 Polyprenyl synthetase SRIM_RS35100 PF13249 Squalene-hopene cyclase N-terminal domain SRIM_RS35100 PF13243 Squalene-hopene cyclase C-terminal domain SRIM_RS35110 PF06463 Molybdenum Cofactor Synthesis C SRIM_RS35110 PF04055 Radical SAM superfamily SRIM_RS35115 PF04551 GcpE protein SRIM_RS35120 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SRIM_RS35120 PF02780 Transketolase, C-terminal domain SRIM_RS35120 PF02779 Transketolase, pyrimidine binding domain SRIM_RS35125 PF00202 Aminotransferase class-III SRIM_RS35135 PF13350 Tyrosine phosphatase family SRIM_RS35140 PF13472 GDSL-like Lipase/Acylhydrolase family SRIM_RS35150 PF01381 Helix-turn-helix SRIM_RS35165 PF01494 FAD binding domain SRIM_RS35175 PF12706 Beta-lactamase superfamily domain SRIM_RS35180 PF04226 Transglycosylase associated protein SRIM_RS35195 PF07690 Major Facilitator Superfamily SRIM_RS35200 PF00067 Cytochrome P450 SRIM_RS35205 PF00733 Asparagine synthase SRIM_RS35205 PF13537 Glutamine amidotransferase domain SRIM_RS35210 PF02195 ParB-like nuclease domain SRIM_RS35215 PF00291 Pyridoxal-phosphate dependent enzyme SRIM_RS35220 PF00132 Bacterial transferase hexapeptide (six repeats) SRIM_RS35235 PF03259 Roadblock/LC7 domain SRIM_RS35255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS35255 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS35255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS35260 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SRIM_RS35260 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SRIM_RS35265 PF01979 Amidohydrolase family SRIM_RS35270 PF12146 Serine aminopeptidase, S33 SRIM_RS35275 PF02779 Transketolase, pyrimidine binding domain SRIM_RS35280 PF00456 Transketolase, thiamine diphosphate binding domain SRIM_RS35285 PF00376 MerR family regulatory protein SRIM_RS35285 PF09278 MerR, DNA binding SRIM_RS35310 PF00067 Cytochrome P450 SRIM_RS35315 PF07943 Penicillin-binding protein 5, C-terminal domain SRIM_RS35315 PF00768 D-alanyl-D-alanine carboxypeptidase SRIM_RS35335 PF00149 Calcineurin-like phosphoesterase SRIM_RS35345 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SRIM_RS35345 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SRIM_RS35350 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SRIM_RS35350 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SRIM_RS35355 PF05853 beta-keto acid cleavage enzyme SRIM_RS35370 PF00120 Glutamine synthetase, catalytic domain SRIM_RS35370 PF03951 Glutamine synthetase, beta-Grasp domain SRIM_RS35385 PF03466 LysR substrate binding domain SRIM_RS35385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS35395 PF09363 XFP C-terminal domain SRIM_RS35395 PF09364 XFP N-terminal domain SRIM_RS35395 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase SRIM_RS35405 PF00480 ROK family SRIM_RS35415 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS35420 PF12911 N-terminal TM domain of oligopeptide transport permease C SRIM_RS35420 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS35425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SRIM_RS35425 PF00005 ABC transporter SRIM_RS35435 PF00171 Aldehyde dehydrogenase family SRIM_RS35445 PF13411 MerR HTH family regulatory protein SRIM_RS35450 PF13466 STAS domain SRIM_RS35450 PF08448 PAS fold SRIM_RS35450 PF13581 Histidine kinase-like ATPase domain SRIM_RS35450 PF07228 Stage II sporulation protein E (SpoIIE) SRIM_RS35460 PF09348 Domain of unknown function (DUF1990) SRIM_RS35475 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SRIM_RS35475 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SRIM_RS35480 PF12833 Helix-turn-helix domain SRIM_RS35480 PF01965 DJ-1/PfpI family SRIM_RS35485 PF00378 Enoyl-CoA hydratase/isomerase SRIM_RS35490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS35490 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS35490 PF18158 Adaptive response protein AidB N-terminal domain SRIM_RS35495 PF01252 Signal peptidase (SPase) II SRIM_RS35505 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase SRIM_RS35520 PF00005 ABC transporter SRIM_RS35520 PF03459 TOBE domain SRIM_RS35525 PF11574 Protein of unknown function (DUF3235) SRIM_RS35525 PF06737 Transglycosylase-like domain SRIM_RS35530 PF01757 Acyltransferase family SRIM_RS35545 PF06827 Zinc finger found in FPG and IleRS SRIM_RS35545 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SRIM_RS35560 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS35560 PF00501 AMP-binding enzyme SRIM_RS35565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS35565 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS35565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS35570 PF03466 LysR substrate binding domain SRIM_RS35570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS35585 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS35585 PF16912 Glucose dehydrogenase C-terminus SRIM_RS35590 PF02502 Ribose/Galactose Isomerase SRIM_RS35595 PF00121 Triosephosphate isomerase SRIM_RS35600 PF00171 Aldehyde dehydrogenase family SRIM_RS35610 PF02342 TerD domain SRIM_RS35615 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase SRIM_RS35625 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS35630 PF00579 tRNA synthetases class I (W and Y) SRIM_RS35635 PF00400 WD domain, G-beta repeat SRIM_RS35635 PF12894 Anaphase-promoting complex subunit 4 WD40 domain SRIM_RS35640 PF00067 Cytochrome P450 SRIM_RS35650 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS35650 PF14759 Reductase C-terminal SRIM_RS35655 PF17755 UvrA DNA-binding domain SRIM_RS35670 PF13520 Amino acid permease SRIM_RS35675 PF07311 Dodecin SRIM_RS35685 PF12399 Branched-chain amino acid ATP-binding cassette transporter SRIM_RS35685 PF00005 ABC transporter SRIM_RS35700 PF00933 Glycosyl hydrolase family 3 N terminal domain SRIM_RS35725 PF00067 Cytochrome P450 SRIM_RS35725 PF00175 Oxidoreductase NAD-binding domain SRIM_RS35725 PF00258 Flavodoxin SRIM_RS35725 PF00667 FAD binding domain SRIM_RS35730 PF01494 FAD binding domain SRIM_RS35750 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SRIM_RS35750 PF00128 Alpha amylase, catalytic domain SRIM_RS35780 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS35785 PF00456 Transketolase, thiamine diphosphate binding domain SRIM_RS35805 PF00756 Putative esterase SRIM_RS35805 PF08310 LGFP repeat SRIM_RS35810 PF00388 Phosphatidylinositol-specific phospholipase C, X domain SRIM_RS35830 PF00067 Cytochrome P450 SRIM_RS35840 PF10017 Histidine-specific methyltransferase, SAM-dependent SRIM_RS35850 PF03781 Sulfatase-modifying factor enzyme 1 SRIM_RS35850 PF12867 DinB superfamily SRIM_RS35855 PF04107 Glutamate-cysteine ligase family 2(GCS2) SRIM_RS35865 PF00501 AMP-binding enzyme SRIM_RS35865 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS35885 PF00561 alpha/beta hydrolase fold SRIM_RS35890 PF01209 ubiE/COQ5 methyltransferase family SRIM_RS35925 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS35925 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS35925 PF00550 Phosphopantetheine attachment site SRIM_RS35925 PF00698 Acyl transferase domain SRIM_RS35925 PF08659 KR domain SRIM_RS35925 PF00107 Zinc-binding dehydrogenase SRIM_RS35925 PF14765 Polyketide synthase dehydratase SRIM_RS35925 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS35925 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS35930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS35930 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS35930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS35935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS35935 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS35935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS35940 PF01494 FAD binding domain SRIM_RS35945 PF08361 MAATS-type transcriptional repressor, C-terminal region SRIM_RS35945 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS35965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SRIM_RS35970 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS35975 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS35975 PF12911 N-terminal TM domain of oligopeptide transport permease C SRIM_RS35980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SRIM_RS35980 PF00005 ABC transporter SRIM_RS35985 PF00005 ABC transporter SRIM_RS36000 PF00501 AMP-binding enzyme SRIM_RS36000 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS36005 PF00067 Cytochrome P450 SRIM_RS36010 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS36010 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS36020 PF00221 Aromatic amino acid lyase SRIM_RS36025 PF00455 DeoR C terminal sensor domain SRIM_RS36025 PF08220 DeoR-like helix-turn-helix domain SRIM_RS36030 PF07690 Major Facilitator Superfamily SRIM_RS36035 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SRIM_RS36035 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SRIM_RS36040 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SRIM_RS36050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SRIM_RS36050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SRIM_RS36050 PF01842 ACT domain SRIM_RS36060 PF00152 tRNA synthetases class II (D, K and N) SRIM_RS36060 PF01336 OB-fold nucleic acid binding domain SRIM_RS36060 PF16995 Transmembrane region of lysyl-tRNA synthetase SRIM_RS36060 PF09924 Uncharacterised conserved protein (DUF2156) SRIM_RS36065 PF17964 Bacterial Ig domain SRIM_RS36065 PF03734 L,D-transpeptidase catalytic domain SRIM_RS36075 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS36080 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS36085 PF00005 ABC transporter SRIM_RS36090 PF14256 YwiC-like protein SRIM_RS36110 PF00561 alpha/beta hydrolase fold SRIM_RS36130 PF00480 ROK family SRIM_RS36140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SRIM_RS36140 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SRIM_RS36145 PF01261 Xylose isomerase-like TIM barrel SRIM_RS36150 PF05448 Acetyl xylan esterase (AXE1) SRIM_RS36155 PF00005 ABC transporter SRIM_RS36160 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS36165 PF00497 Bacterial extracellular solute-binding proteins, family 3 SRIM_RS36170 PF02574 Homocysteine S-methyltransferase SRIM_RS36175 PF04264 YceI-like domain SRIM_RS36180 PF02929 Beta galactosidase small chain SRIM_RS36180 PF16353 Domain of unknown function(DUF4981) SRIM_RS36180 PF02837 Glycosyl hydrolases family 2, sugar binding domain SRIM_RS36180 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SRIM_RS36200 PF00176 SNF2 family N-terminal domain SRIM_RS36200 PF00271 Helicase conserved C-terminal domain SRIM_RS36200 PF12419 SNF2 Helicase protein SRIM_RS36225 PF08241 Methyltransferase domain SRIM_RS36230 PF08548 Peptidase M10 serralysin C terminal SRIM_RS36230 PF12708 Pectate lyase superfamily protein SRIM_RS36230 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) SRIM_RS36235 PF01596 O-methyltransferase SRIM_RS36255 PF03259 Roadblock/LC7 domain SRIM_RS36285 PF00550 Phosphopantetheine attachment site SRIM_RS36290 PF00155 Aminotransferase class I and II SRIM_RS36300 PF00205 Thiamine pyrophosphate enzyme, central domain SRIM_RS36300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SRIM_RS36300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SRIM_RS36305 PF00501 AMP-binding enzyme SRIM_RS36305 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS36315 PF00271 Helicase conserved C-terminal domain SRIM_RS36315 PF08148 DSHCT (NUC185) domain SRIM_RS36315 PF00270 DEAD/DEAH box helicase SRIM_RS36325 PF00005 ABC transporter SRIM_RS36325 PF00664 ABC transporter transmembrane region SRIM_RS36330 PF00005 ABC transporter SRIM_RS36330 PF00664 ABC transporter transmembrane region SRIM_RS36340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SRIM_RS36345 PF02806 Alpha amylase, C-terminal all-beta domain SRIM_RS36345 PF00128 Alpha amylase, catalytic domain SRIM_RS36360 PF00664 ABC transporter transmembrane region SRIM_RS36360 PF00005 ABC transporter SRIM_RS36385 PF02929 Beta galactosidase small chain SRIM_RS36385 PF16353 Domain of unknown function(DUF4981) SRIM_RS36385 PF00703 Glycosyl hydrolases family 2 SRIM_RS36385 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SRIM_RS36385 PF02837 Glycosyl hydrolases family 2, sugar binding domain SRIM_RS36390 PF02589 LUD domain SRIM_RS36395 PF02589 LUD domain SRIM_RS36395 PF13183 4Fe-4S dicluster domain SRIM_RS36395 PF11870 Domain of unknown function (DUF3390) SRIM_RS36400 PF02754 Cysteine-rich domain SRIM_RS36405 PF00083 Sugar (and other) transporter SRIM_RS36410 PF00891 O-methyltransferase domain SRIM_RS36410 PF16864 Dimerisation domain SRIM_RS36435 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS36440 PF00296 Luciferase-like monooxygenase SRIM_RS36450 PF00005 ABC transporter SRIM_RS36455 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS36460 PF01894 Uncharacterised protein family UPF0047 SRIM_RS36485 PF13087 AAA domain SRIM_RS36485 PF13091 PLD-like domain SRIM_RS36520 PF02668 Taurine catabolism dioxygenase TauD, TfdA family SRIM_RS36535 PF14765 Polyketide synthase dehydratase SRIM_RS36535 PF00550 Phosphopantetheine attachment site SRIM_RS36535 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS36535 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS36535 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS36535 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS36535 PF00668 Condensation domain SRIM_RS36535 PF08659 KR domain SRIM_RS36535 PF00501 AMP-binding enzyme SRIM_RS36540 PF00975 Thioesterase domain SRIM_RS36540 PF00550 Phosphopantetheine attachment site SRIM_RS36540 PF00668 Condensation domain SRIM_RS36540 PF00501 AMP-binding enzyme SRIM_RS36540 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS36545 PF00501 AMP-binding enzyme SRIM_RS36545 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS36545 PF00668 Condensation domain SRIM_RS36545 PF00550 Phosphopantetheine attachment site SRIM_RS36545 PF00975 Thioesterase domain SRIM_RS36550 PF04679 ATP dependent DNA ligase C terminal region SRIM_RS36550 PF01068 ATP dependent DNA ligase domain SRIM_RS36555 PF13298 DNA polymerase Ligase (LigD) SRIM_RS36555 PF01068 ATP dependent DNA ligase domain SRIM_RS36555 PF04679 ATP dependent DNA ligase C terminal region SRIM_RS36565 PF04542 Sigma-70 region 2 SRIM_RS36565 PF08281 Sigma-70, region 4 SRIM_RS36580 PF13419 Haloacid dehalogenase-like hydrolase SRIM_RS36590 PF04143 Sulphur transport SRIM_RS36600 PF10282 Lactonase, 7-bladed beta-propeller SRIM_RS36610 PF01869 BadF/BadG/BcrA/BcrD ATPase family SRIM_RS36620 PF03167 Uracil DNA glycosylase superfamily SRIM_RS36640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SRIM_RS36650 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SRIM_RS36650 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SRIM_RS36665 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS36670 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS36670 PF00202 Aminotransferase class-III SRIM_RS36670 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS36670 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS36670 PF00550 Phosphopantetheine attachment site SRIM_RS36670 PF00501 AMP-binding enzyme SRIM_RS36670 PF00668 Condensation domain SRIM_RS36670 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS36675 PF00501 AMP-binding enzyme SRIM_RS36675 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS36675 PF00668 Condensation domain SRIM_RS36675 PF00550 Phosphopantetheine attachment site SRIM_RS36675 PF00975 Thioesterase domain SRIM_RS36690 PF00291 Pyridoxal-phosphate dependent enzyme SRIM_RS36695 PF04107 Glutamate-cysteine ligase family 2(GCS2) SRIM_RS36700 PF03777 ChpA-C SRIM_RS36705 PF02868 Thermolysin metallopeptidase, alpha-helical domain SRIM_RS36705 PF07504 Fungalysin/Thermolysin Propeptide Motif SRIM_RS36705 PF01447 Thermolysin metallopeptidase, catalytic domain SRIM_RS36705 PF03413 Peptidase propeptide and YPEB domain SRIM_RS36710 PF03704 Bacterial transcriptional activator domain SRIM_RS36710 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS36715 PF00550 Phosphopantetheine attachment site SRIM_RS36725 PF07993 Male sterility protein SRIM_RS36725 PF00550 Phosphopantetheine attachment site SRIM_RS36735 PF00709 Adenylosuccinate synthetase SRIM_RS36740 PF03641 Possible lysine decarboxylase SRIM_RS36745 PF00067 Cytochrome P450 SRIM_RS36750 PF03737 Aldolase/RraA SRIM_RS36755 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SRIM_RS36755 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SRIM_RS36765 PF13302 Acetyltransferase (GNAT) domain SRIM_RS36770 PF07690 Major Facilitator Superfamily SRIM_RS36780 PF04107 Glutamate-cysteine ligase family 2(GCS2) SRIM_RS36785 PF12697 Alpha/beta hydrolase family SRIM_RS36790 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS36790 PF00501 AMP-binding enzyme SRIM_RS36795 PF00571 CBS domain SRIM_RS36795 PF00478 IMP dehydrogenase / GMP reductase domain SRIM_RS36805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SRIM_RS36805 PF00005 ABC transporter SRIM_RS36810 PF01554 MatE SRIM_RS36830 PF13443 Cro/C1-type HTH DNA-binding domain SRIM_RS36850 PF07690 Major Facilitator Superfamily SRIM_RS36855 PF01022 Bacterial regulatory protein, arsR family SRIM_RS36870 PF00892 EamA-like transporter family SRIM_RS36880 PF00571 CBS domain SRIM_RS36895 PF13631 Cytochrome b(N-terminal)/b6/petB SRIM_RS36905 PF00115 Cytochrome C and Quinol oxidase polypeptide I SRIM_RS36920 PF00067 Cytochrome P450 SRIM_RS36935 PF01022 Bacterial regulatory protein, arsR family SRIM_RS36940 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRIM_RS36945 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS36945 PF17934 Tetracyclin repressor-like, C-terminal domain SRIM_RS36960 PF03109 ABC1 family SRIM_RS36975 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS36975 PF00107 Zinc-binding dehydrogenase SRIM_RS36975 PF08659 KR domain SRIM_RS36975 PF00698 Acyl transferase domain SRIM_RS36975 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS36975 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS36975 PF14765 Polyketide synthase dehydratase SRIM_RS36975 PF00550 Phosphopantetheine attachment site SRIM_RS36975 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS36985 PF00005 ABC transporter SRIM_RS36995 PF00348 Polyprenyl synthetase SRIM_RS37015 PF00106 short chain dehydrogenase SRIM_RS37050 PF00296 Luciferase-like monooxygenase SRIM_RS37060 PF13649 Methyltransferase domain SRIM_RS37065 PF00202 Aminotransferase class-III SRIM_RS37070 PF00465 Iron-containing alcohol dehydrogenase SRIM_RS37090 PF00005 ABC transporter SRIM_RS37105 PF00069 Protein kinase domain SRIM_RS37110 PF00535 Glycosyl transferase family 2 SRIM_RS37115 PF00483 Nucleotidyl transferase SRIM_RS37165 PF13472 GDSL-like Lipase/Acylhydrolase family SRIM_RS37175 PF00089 Trypsin SRIM_RS37190 PF01548 Transposase SRIM_RS37190 PF02371 Transposase IS116/IS110/IS902 family SRIM_RS37200 PF03372 Endonuclease/Exonuclease/phosphatase family SRIM_RS37210 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS37210 PF00072 Response regulator receiver domain SRIM_RS37215 PF13649 Methyltransferase domain SRIM_RS37220 PF00704 Glycosyl hydrolases family 18 SRIM_RS37235 PF13180 PDZ domain SRIM_RS37270 PF13613 Helix-turn-helix of DDE superfamily endonuclease SRIM_RS37270 PF01609 Transposase DDE domain SRIM_RS37335 PF03595 Voltage-dependent anion channel SRIM_RS37340 PF02665 Nitrate reductase gamma subunit SRIM_RS37340 PF02613 Nitrate reductase delta subunit SRIM_RS37340 PF00384 Molybdopterin oxidoreductase SRIM_RS37345 PF02613 Nitrate reductase delta subunit SRIM_RS37350 PF14711 Respiratory nitrate reductase beta C-terminal SRIM_RS37350 PF13247 4Fe-4S dicluster domain SRIM_RS37355 PF01568 Molydopterin dinucleotide binding domain SRIM_RS37355 PF00384 Molybdopterin oxidoreductase SRIM_RS37385 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS37400 PF00145 C-5 cytosine-specific DNA methylase SRIM_RS37500 PF01609 Transposase DDE domain SRIM_RS37500 PF13613 Helix-turn-helix of DDE superfamily endonuclease SRIM_RS37575 PF00877 NlpC/P60 family SRIM_RS37645 PF07478 D-ala D-ala ligase C-terminus SRIM_RS37645 PF01820 D-ala D-ala ligase N-terminus SRIM_RS37665 PF14765 Polyketide synthase dehydratase SRIM_RS37665 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS37665 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS37665 PF00107 Zinc-binding dehydrogenase SRIM_RS37665 PF08659 KR domain SRIM_RS37665 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS37665 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS37665 PF00550 Phosphopantetheine attachment site SRIM_RS37665 PF00698 Acyl transferase domain SRIM_RS37675 PF01726 LexA DNA binding domain SRIM_RS37675 PF00717 Peptidase S24-like SRIM_RS37705 PF01348 Type II intron maturase SRIM_RS37705 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SRIM_RS37715 PF13340 Putative transposase of IS4/5 family (DUF4096) SRIM_RS37750 PF02467 Transcription factor WhiB SRIM_RS37775 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS37775 PF08361 MAATS-type transcriptional repressor, C-terminal region SRIM_RS37860 PF00293 NUDIX domain SRIM_RS37910 PF03780 Asp23 family, cell envelope-related function SRIM_RS37940 PF01548 Transposase SRIM_RS37940 PF02371 Transposase IS116/IS110/IS902 family SRIM_RS37945 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SRIM_RS37945 PF01348 Type II intron maturase SRIM_RS38010 PF00487 Fatty acid desaturase SRIM_RS38015 PF00175 Oxidoreductase NAD-binding domain SRIM_RS38015 PF00970 Oxidoreductase FAD-binding domain SRIM_RS38015 PF00111 2Fe-2S iron-sulfur cluster binding domain SRIM_RS38135 PF03777 ChpA-C SRIM_RS38145 PF01740 STAS domain SRIM_RS38215 PF10672 S-adenosylmethionine-dependent methyltransferase SRIM_RS38215 PF02926 THUMP domain SRIM_RS38215 PF01170 Putative RNA methylase family UPF0020 SRIM_RS38230 PF00986 DNA gyrase B subunit, carboxyl terminus SRIM_RS38230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS38230 PF00204 DNA gyrase B SRIM_RS38230 PF01751 Toprim domain SRIM_RS38260 PF04075 F420H(2)-dependent quinone reductase SRIM_RS38275 PF13649 Methyltransferase domain SRIM_RS38280 PF00067 Cytochrome P450 SRIM_RS38310 PF00072 Response regulator receiver domain SRIM_RS38310 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS38315 PF00679 Elongation factor G C-terminus SRIM_RS38315 PF03764 Elongation factor G, domain IV SRIM_RS38315 PF00009 Elongation factor Tu GTP binding domain SRIM_RS38320 PF00891 O-methyltransferase domain SRIM_RS38320 PF16864 Dimerisation domain SRIM_RS38325 PF01494 FAD binding domain SRIM_RS38330 PF01243 Pyridoxamine 5'-phosphate oxidase SRIM_RS38335 PF00155 Aminotransferase class I and II SRIM_RS38340 PF00550 Phosphopantetheine attachment site SRIM_RS38340 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS38340 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS38340 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS38340 PF00668 Condensation domain SRIM_RS38340 PF00698 Acyl transferase domain SRIM_RS38350 PF04199 Putative cyclase SRIM_RS38360 PF01494 FAD binding domain SRIM_RS38365 PF10604 Polyketide cyclase / dehydrase and lipid transport SRIM_RS38370 PF00106 short chain dehydrogenase SRIM_RS38380 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS38380 PF00501 AMP-binding enzyme SRIM_RS38385 PF00891 O-methyltransferase domain SRIM_RS38390 PF01494 FAD binding domain SRIM_RS38395 PF13537 Glutamine amidotransferase domain SRIM_RS38395 PF00733 Asparagine synthase SRIM_RS38400 PF00550 Phosphopantetheine attachment site SRIM_RS38405 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS38405 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS38410 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS38410 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS38420 PF07690 Major Facilitator Superfamily SRIM_RS38425 PF03704 Bacterial transcriptional activator domain SRIM_RS38425 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS38435 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SRIM_RS38435 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SRIM_RS38440 PF03450 CO dehydrogenase flavoprotein C-terminal domain SRIM_RS38440 PF00941 FAD binding domain in molybdopterin dehydrogenase SRIM_RS38445 PF10518 TAT (twin-arginine translocation) pathway signal sequence SRIM_RS38445 PF01799 [2Fe-2S] binding domain SRIM_RS38445 PF00111 2Fe-2S iron-sulfur cluster binding domain SRIM_RS38450 PF01381 Helix-turn-helix SRIM_RS38450 PF09856 Predicted transcriptional regulator (DUF2083) SRIM_RS38450 PF06114 IrrE N-terminal-like domain SRIM_RS38455 PF03972 MmgE/PrpD family SRIM_RS38465 PF00285 Citrate synthase, C-terminal domain SRIM_RS38470 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SRIM_RS38470 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SRIM_RS38475 PF01274 Malate synthase SRIM_RS38480 PF00463 Isocitrate lyase family SRIM_RS38485 PF03595 Voltage-dependent anion channel SRIM_RS38490 PF00384 Molybdopterin oxidoreductase SRIM_RS38490 PF02613 Nitrate reductase delta subunit SRIM_RS38490 PF02665 Nitrate reductase gamma subunit SRIM_RS38500 PF13247 4Fe-4S dicluster domain SRIM_RS38500 PF14711 Respiratory nitrate reductase beta C-terminal SRIM_RS38505 PF01568 Molydopterin dinucleotide binding domain SRIM_RS38505 PF00384 Molybdopterin oxidoreductase SRIM_RS38510 PF13411 MerR HTH family regulatory protein SRIM_RS38510 PF07739 TipAS antibiotic-recognition domain SRIM_RS38515 PF00041 Fibronectin type III domain SRIM_RS38515 PF00704 Glycosyl hydrolases family 18 SRIM_RS38525 PF00005 ABC transporter SRIM_RS38525 PF13732 Domain of unknown function (DUF4162) SRIM_RS38530 PF00723 Glycosyl hydrolases family 15 SRIM_RS38535 PF01565 FAD binding domain SRIM_RS38535 PF13183 4Fe-4S dicluster domain SRIM_RS38535 PF02913 FAD linked oxidases, C-terminal domain SRIM_RS38560 PF04542 Sigma-70 region 2 SRIM_RS38560 PF12680 SnoaL-like domain SRIM_RS38560 PF08281 Sigma-70, region 4 SRIM_RS38610 PF00005 ABC transporter SRIM_RS38610 PF00664 ABC transporter transmembrane region SRIM_RS38620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS38620 PF03466 LysR substrate binding domain SRIM_RS38625 PF02311 AraC-like ligand binding domain SRIM_RS38625 PF12833 Helix-turn-helix domain SRIM_RS38635 PF01451 Low molecular weight phosphotyrosine protein phosphatase SRIM_RS38640 PF01758 Sodium Bile acid symporter family SRIM_RS38645 PF01022 Bacterial regulatory protein, arsR family SRIM_RS38650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SRIM_RS38665 PF00248 Aldo/keto reductase family SRIM_RS38670 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS38670 PF00107 Zinc-binding dehydrogenase SRIM_RS38675 PF12833 Helix-turn-helix domain SRIM_RS38695 PF00155 Aminotransferase class I and II SRIM_RS38700 PF00156 Phosphoribosyl transferase domain SRIM_RS38700 PF01738 Dienelactone hydrolase family SRIM_RS38705 PF00156 Phosphoribosyl transferase domain SRIM_RS38705 PF05139 Erythromycin esterase SRIM_RS38710 PF00156 Phosphoribosyl transferase domain SRIM_RS38710 PF05139 Erythromycin esterase SRIM_RS38725 PF12833 Helix-turn-helix domain SRIM_RS38725 PF01965 DJ-1/PfpI family SRIM_RS38805 PF02401 LytB protein SRIM_RS38810 PF01032 FecCD transport family SRIM_RS38815 PF01032 FecCD transport family SRIM_RS38820 PF01497 Periplasmic binding protein SRIM_RS38825 PF00857 Isochorismatase family SRIM_RS38825 PF00550 Phosphopantetheine attachment site SRIM_RS38830 PF00668 Condensation domain SRIM_RS38830 PF00975 Thioesterase domain SRIM_RS38830 PF00550 Phosphopantetheine attachment site SRIM_RS38830 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS38830 PF00501 AMP-binding enzyme SRIM_RS38845 PF07690 Major Facilitator Superfamily SRIM_RS38850 PF11806 Domain of unknown function (DUF3327) SRIM_RS38850 PF00756 Putative esterase SRIM_RS38860 PF00561 alpha/beta hydrolase fold SRIM_RS38870 PF00398 Ribosomal RNA adenine dimethylase SRIM_RS38880 PF01032 FecCD transport family SRIM_RS38885 PF01032 FecCD transport family SRIM_RS38890 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SRIM_RS38895 PF04321 RmlD substrate binding domain SRIM_RS38900 PF16363 GDP-mannose 4,6 dehydratase SRIM_RS38905 PF00483 Nucleotidyl transferase SRIM_RS38910 PF00664 ABC transporter transmembrane region SRIM_RS38910 PF00005 ABC transporter SRIM_RS38915 PF06722 Protein of unknown function (DUF1205) SRIM_RS38920 PF00756 Putative esterase SRIM_RS38920 PF11806 Domain of unknown function (DUF3327) SRIM_RS38925 PF01497 Periplasmic binding protein SRIM_RS38930 PF00667 FAD binding domain SRIM_RS38930 PF00258 Flavodoxin SRIM_RS38930 PF00175 Oxidoreductase NAD-binding domain SRIM_RS38930 PF00067 Cytochrome P450 SRIM_RS38950 PF01494 FAD binding domain SRIM_RS38955 PF12680 SnoaL-like domain SRIM_RS38955 PF08281 Sigma-70, region 4 SRIM_RS38955 PF04542 Sigma-70 region 2 SRIM_RS38960 PF02627 Carboxymuconolactone decarboxylase family SRIM_RS38965 PF00561 alpha/beta hydrolase fold SRIM_RS38970 PF02839 Carbohydrate binding domain SRIM_RS38985 PF16363 GDP-mannose 4,6 dehydratase SRIM_RS38990 PF00975 Thioesterase domain SRIM_RS39015 PF14765 Polyketide synthase dehydratase SRIM_RS39015 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS39015 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS39015 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS39015 PF00698 Acyl transferase domain SRIM_RS39015 PF00550 Phosphopantetheine attachment site SRIM_RS39015 PF08659 KR domain SRIM_RS39020 PF00698 Acyl transferase domain SRIM_RS39020 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS39020 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS39020 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS39020 PF08659 KR domain SRIM_RS39020 PF00550 Phosphopantetheine attachment site SRIM_RS39020 PF14765 Polyketide synthase dehydratase SRIM_RS39020 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS39025 PF00550 Phosphopantetheine attachment site SRIM_RS39025 PF00698 Acyl transferase domain SRIM_RS39025 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS39025 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS39025 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS39025 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS39025 PF08659 KR domain SRIM_RS39025 PF14765 Polyketide synthase dehydratase SRIM_RS39030 PF08659 KR domain SRIM_RS39030 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS39030 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS39030 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS39030 PF00698 Acyl transferase domain SRIM_RS39030 PF00550 Phosphopantetheine attachment site SRIM_RS39030 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS39030 PF14765 Polyketide synthase dehydratase SRIM_RS39035 PF13350 Tyrosine phosphatase family SRIM_RS39040 PF00732 GMC oxidoreductase SRIM_RS39040 PF05199 GMC oxidoreductase SRIM_RS39050 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SRIM_RS39055 PF00067 Cytochrome P450 SRIM_RS39060 PF06902 Divergent 4Fe-4S mono-cluster SRIM_RS39065 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS39065 PF14765 Polyketide synthase dehydratase SRIM_RS39065 PF00550 Phosphopantetheine attachment site SRIM_RS39065 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS39065 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS39065 PF00698 Acyl transferase domain SRIM_RS39065 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS39065 PF08659 KR domain SRIM_RS39075 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS39075 PF00107 Zinc-binding dehydrogenase SRIM_RS39095 PF12802 MarR family SRIM_RS39115 PF04545 Sigma-70, region 4 SRIM_RS39115 PF04542 Sigma-70 region 2 SRIM_RS39125 PF00348 Polyprenyl synthetase SRIM_RS39155 PF03060 Nitronate monooxygenase SRIM_RS39205 PF03976 Polyphosphate kinase 2 (PPK2) SRIM_RS39210 PF00689 Cation transporting ATPase, C-terminus SRIM_RS39210 PF00690 Cation transporter/ATPase, N-terminus SRIM_RS39225 PF00571 CBS domain SRIM_RS39225 PF00478 IMP dehydrogenase / GMP reductase domain SRIM_RS39230 PF00582 Universal stress protein family SRIM_RS39235 PF00583 Acetyltransferase (GNAT) family SRIM_RS39235 PF13607 Succinyl-CoA ligase like flavodoxin domain SRIM_RS39235 PF13380 CoA binding domain SRIM_RS39240 PF13419 Haloacid dehalogenase-like hydrolase SRIM_RS39245 PF01455 HupF/HypC family SRIM_RS39250 PF07503 HypF finger SRIM_RS39250 PF01300 Telomere recombination SRIM_RS39250 PF17788 HypF Kae1-like domain SRIM_RS39250 PF00708 Acylphosphatase SRIM_RS39260 PF00582 Universal stress protein family SRIM_RS39265 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS39265 PF00072 Response regulator receiver domain SRIM_RS39275 PF02769 AIR synthase related protein, C-terminal domain SRIM_RS39275 PF00586 AIR synthase related protein, N-terminal domain SRIM_RS39280 PF01924 Hydrogenase formation hypA family SRIM_RS39285 PF00478 IMP dehydrogenase / GMP reductase domain SRIM_RS39285 PF00571 CBS domain SRIM_RS39300 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B SRIM_RS39300 PF00175 Oxidoreductase NAD-binding domain SRIM_RS39315 PF03976 Polyphosphate kinase 2 (PPK2) SRIM_RS39320 PF00144 Beta-lactamase SRIM_RS39325 PF13520 Amino acid permease SRIM_RS39330 PF07730 Histidine kinase SRIM_RS39330 PF13185 GAF domain SRIM_RS39330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS39330 PF13492 GAF domain SRIM_RS39360 PF00067 Cytochrome P450 SRIM_RS39365 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS39365 PF00698 Acyl transferase domain SRIM_RS39365 PF08659 KR domain SRIM_RS39365 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS39365 PF14765 Polyketide synthase dehydratase SRIM_RS39365 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS39365 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS39365 PF00550 Phosphopantetheine attachment site SRIM_RS39370 PF00067 Cytochrome P450 SRIM_RS39375 PF14765 Polyketide synthase dehydratase SRIM_RS39375 PF00550 Phosphopantetheine attachment site SRIM_RS39375 PF08659 KR domain SRIM_RS39375 PF00698 Acyl transferase domain SRIM_RS39375 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS39375 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS39375 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS39380 PF08990 Erythronolide synthase docking SRIM_RS39380 PF00698 Acyl transferase domain SRIM_RS39380 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS39380 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS39380 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS39380 PF00550 Phosphopantetheine attachment site SRIM_RS39380 PF00975 Thioesterase domain SRIM_RS39390 PF03358 NADPH-dependent FMN reductase SRIM_RS39430 PF00313 'Cold-shock' DNA-binding domain SRIM_RS39440 PF00106 short chain dehydrogenase SRIM_RS39445 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS39475 PF00171 Aldehyde dehydrogenase family SRIM_RS39500 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS39515 PF03952 Enolase, N-terminal domain SRIM_RS39515 PF00113 Enolase, C-terminal TIM barrel domain SRIM_RS39525 PF07685 CobB/CobQ-like glutamine amidotransferase domain SRIM_RS39525 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SRIM_RS39530 PF00795 Carbon-nitrogen hydrolase SRIM_RS39555 PF17754 MftR C-terminal domain SRIM_RS39555 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS39560 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS39560 PF00107 Zinc-binding dehydrogenase SRIM_RS39570 PF00553 Cellulose binding domain SRIM_RS39570 PF00041 Fibronectin type III domain SRIM_RS39570 PF00704 Glycosyl hydrolases family 18 SRIM_RS39575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS39575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS39575 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS39590 PF01636 Phosphotransferase enzyme family SRIM_RS39600 PF01037 Lrp/AsnC ligand binding domain SRIM_RS39610 PF00535 Glycosyl transferase family 2 SRIM_RS39610 PF00795 Carbon-nitrogen hydrolase SRIM_RS39615 PF00535 Glycosyl transferase family 2 SRIM_RS39620 PF00296 Luciferase-like monooxygenase SRIM_RS39640 PF13397 RNA polymerase-binding protein SRIM_RS39650 PF00296 Luciferase-like monooxygenase SRIM_RS39660 PF00155 Aminotransferase class I and II SRIM_RS39660 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS39695 PF00144 Beta-lactamase SRIM_RS39715 PF13466 STAS domain SRIM_RS39715 PF08448 PAS fold SRIM_RS39715 PF13581 Histidine kinase-like ATPase domain SRIM_RS39715 PF07228 Stage II sporulation protein E (SpoIIE) SRIM_RS39745 PF00501 AMP-binding enzyme SRIM_RS39745 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS39745 PF00668 Condensation domain SRIM_RS39745 PF00550 Phosphopantetheine attachment site SRIM_RS39750 PF03621 MbtH-like protein SRIM_RS39770 PF00144 Beta-lactamase SRIM_RS39790 PF02735 Ku70/Ku80 beta-barrel domain SRIM_RS39795 PF04679 ATP dependent DNA ligase C terminal region SRIM_RS39795 PF01068 ATP dependent DNA ligase domain SRIM_RS39795 PF13298 DNA polymerase Ligase (LigD) SRIM_RS39800 PF02031 Streptomyces extracellular neutral proteinase (M7) family SRIM_RS39815 PF05430 S-adenosyl-L-methionine-dependent methyltransferase SRIM_RS39815 PF01266 FAD dependent oxidoreductase SRIM_RS39835 PF01593 Flavin containing amine oxidoreductase SRIM_RS39840 PF01593 Flavin containing amine oxidoreductase SRIM_RS39845 PF00348 Polyprenyl synthetase SRIM_RS39850 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS39850 PF00072 Response regulator receiver domain SRIM_RS39860 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS39860 PF00698 Acyl transferase domain SRIM_RS39860 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS39860 PF00550 Phosphopantetheine attachment site SRIM_RS39860 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS39860 PF00668 Condensation domain SRIM_RS39865 PF00550 Phosphopantetheine attachment site SRIM_RS39865 PF00668 Condensation domain SRIM_RS39865 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS39865 PF00501 AMP-binding enzyme SRIM_RS39865 PF00202 Aminotransferase class-III SRIM_RS39865 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS39865 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS39865 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS39870 PF00313 'Cold-shock' DNA-binding domain SRIM_RS39875 PF00107 Zinc-binding dehydrogenase SRIM_RS39875 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS39885 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS39885 PF00155 Aminotransferase class I and II SRIM_RS39900 PF00005 ABC transporter SRIM_RS39910 PF04075 F420H(2)-dependent quinone reductase SRIM_RS39920 PF03900 Porphobilinogen deaminase, C-terminal domain SRIM_RS39920 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SRIM_RS39935 PF00768 D-alanyl-D-alanine carboxypeptidase SRIM_RS39940 PF00188 Cysteine-rich secretory protein family SRIM_RS39945 PF02195 ParB-like nuclease domain SRIM_RS39950 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS39950 PF13305 Tetracyclin repressor-like, C-terminal domain SRIM_RS39970 PF01757 Acyltransferase family SRIM_RS39980 PF00881 Nitroreductase family SRIM_RS40020 PF06902 Divergent 4Fe-4S mono-cluster SRIM_RS40025 PF00067 Cytochrome P450 SRIM_RS40030 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS40030 PF16859 Tetracyclin repressor-like, C-terminal domain SRIM_RS40040 PF01381 Helix-turn-helix SRIM_RS40040 PF08671 Anti-repressor SinI SRIM_RS40045 PF00596 Class II Aldolase and Adducin N-terminal domain SRIM_RS40050 PF00701 Dihydrodipicolinate synthetase family SRIM_RS40075 PF13460 NAD(P)H-binding SRIM_RS40090 PF01965 DJ-1/PfpI family SRIM_RS40110 PF00128 Alpha amylase, catalytic domain SRIM_RS40110 PF11941 Domain of unknown function (DUF3459) SRIM_RS40115 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS40120 PF00528 Binding-protein-dependent transport system inner membrane component SRIM_RS40125 PF13416 Bacterial extracellular solute-binding protein SRIM_RS40130 PF00356 Bacterial regulatory proteins, lacI family SRIM_RS40135 PF03330 Lytic transglycolase SRIM_RS40150 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS40155 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS40155 PF00107 Zinc-binding dehydrogenase SRIM_RS40160 PF00005 ABC transporter SRIM_RS40165 PF00005 ABC transporter SRIM_RS40180 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS40190 PF00561 alpha/beta hydrolase fold SRIM_RS40200 PF03485 Arginyl tRNA synthetase N terminal domain SRIM_RS40200 PF00750 tRNA synthetases class I (R) SRIM_RS40200 PF05746 DALR anticodon binding domain SRIM_RS40225 PF13649 Methyltransferase domain SRIM_RS40235 PF13581 Histidine kinase-like ATPase domain SRIM_RS40235 PF08448 PAS fold SRIM_RS40235 PF07228 Stage II sporulation protein E (SpoIIE) SRIM_RS40235 PF13466 STAS domain SRIM_RS40240 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SRIM_RS40240 PF00072 Response regulator receiver domain SRIM_RS40240 PF01627 Hpt domain SRIM_RS40240 PF00512 His Kinase A (phospho-acceptor) domain SRIM_RS40240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRIM_RS40240 PF00672 HAMP domain SRIM_RS40260 PF02585 GlcNAc-PI de-N-acetylase SRIM_RS40275 PF00135 Carboxylesterase family SRIM_RS40290 PF00211 Adenylate and Guanylate cyclase catalytic domain SRIM_RS40290 PF13191 AAA ATPase domain SRIM_RS40305 PF00067 Cytochrome P450 SRIM_RS40315 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS40315 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS40320 PF13537 Glutamine amidotransferase domain SRIM_RS40320 PF00733 Asparagine synthase SRIM_RS40325 PF03176 MMPL family SRIM_RS40345 PF00668 Condensation domain SRIM_RS40345 PF00501 AMP-binding enzyme SRIM_RS40345 PF07993 Male sterility protein SRIM_RS40345 PF00550 Phosphopantetheine attachment site SRIM_RS40345 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS40350 PF00067 Cytochrome P450 SRIM_RS40355 PF00067 Cytochrome P450 SRIM_RS40365 PF01161 Phosphatidylethanolamine-binding protein SRIM_RS40385 PF10604 Polyketide cyclase / dehydrase and lipid transport SRIM_RS40400 PF01244 Membrane dipeptidase (Peptidase family M19) SRIM_RS40415 PF13378 Enolase C-terminal domain-like SRIM_RS40415 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SRIM_RS40420 PF00144 Beta-lactamase SRIM_RS40430 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS40465 PF01494 FAD binding domain SRIM_RS40475 PF00293 NUDIX domain SRIM_RS40485 PF07690 Major Facilitator Superfamily SRIM_RS40505 PF00144 Beta-lactamase SRIM_RS40510 PF03466 LysR substrate binding domain SRIM_RS40510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS40530 PF06441 Epoxide hydrolase N terminus SRIM_RS40550 PF18029 Glyoxalase-like domain SRIM_RS40550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SRIM_RS40570 PF00144 Beta-lactamase SRIM_RS40610 PF00067 Cytochrome P450 SRIM_RS40615 PF00067 Cytochrome P450 SRIM_RS40715 PF16295 Tetracyclin repressor-like, C-terminal domain SRIM_RS40715 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS40920 PF01609 Transposase DDE domain SRIM_RS40920 PF13613 Helix-turn-helix of DDE superfamily endonuclease SRIM_RS40930 PF00296 Luciferase-like monooxygenase SRIM_RS40935 PF03358 NADPH-dependent FMN reductase SRIM_RS40940 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS40940 PF08028 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS40940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS40945 PF00296 Luciferase-like monooxygenase SRIM_RS40955 PF03466 LysR substrate binding domain SRIM_RS40955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRIM_RS40960 PF04264 YceI-like domain SRIM_RS40965 PF01433 Peptidase family M1 domain SRIM_RS40965 PF11838 ERAP1-like C-terminal domain SRIM_RS40985 PF00704 Glycosyl hydrolases family 18 SRIM_RS40990 PF01483 Proprotein convertase P-domain SRIM_RS40990 PF07504 Fungalysin/Thermolysin Propeptide Motif SRIM_RS40990 PF01447 Thermolysin metallopeptidase, catalytic domain SRIM_RS40990 PF02868 Thermolysin metallopeptidase, alpha-helical domain SRIM_RS40995 PF13427 Domain of unknown function (DUF4111) SRIM_RS40995 PF01909 Nucleotidyltransferase domain SRIM_RS41005 PF02225 PA domain SRIM_RS41005 PF04389 Peptidase family M28 SRIM_RS41070 PF00196 Bacterial regulatory proteins, luxR family SRIM_RS41075 PF00106 short chain dehydrogenase SRIM_RS41080 PF01494 FAD binding domain SRIM_RS41085 PF00550 Phosphopantetheine attachment site SRIM_RS41085 PF00975 Thioesterase domain SRIM_RS41085 PF00668 Condensation domain SRIM_RS41085 PF00501 AMP-binding enzyme SRIM_RS41085 PF00975 Thioesterase domain SRIM_RS41085 PF00550 Phosphopantetheine attachment site SRIM_RS41085 PF00668 Condensation domain SRIM_RS41085 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS41085 PF00501 AMP-binding enzyme SRIM_RS41085 PF13193 AMP-binding enzyme C-terminal domain SRIM_RS41195 PF01138 3' exoribonuclease family, domain 1 SRIM_RS41195 PF00013 KH domain SRIM_RS41195 PF03725 3' exoribonuclease family, domain 2 SRIM_RS41195 PF00575 S1 RNA binding domain SRIM_RS41195 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SRIM_RS41230 PF03704 Bacterial transcriptional activator domain SRIM_RS41230 PF00931 NB-ARC domain SRIM_RS41230 PF00486 Transcriptional regulatory protein, C terminal SRIM_RS41375 PF00067 Cytochrome P450 SRIM_RS41380 PF08240 Alcohol dehydrogenase GroES-like domain SRIM_RS41380 PF00107 Zinc-binding dehydrogenase SRIM_RS41380 PF00698 Acyl transferase domain SRIM_RS41380 PF16197 Ketoacyl-synthetase C-terminal extension SRIM_RS41380 PF00109 Beta-ketoacyl synthase, N-terminal domain SRIM_RS41380 PF14765 Polyketide synthase dehydratase SRIM_RS41380 PF00550 Phosphopantetheine attachment site SRIM_RS41380 PF08659 KR domain SRIM_RS41380 PF02801 Beta-ketoacyl synthase, C-terminal domain SRIM_RS41405 PF00589 Phage integrase family SRIM_RS41405 PF02899 Phage integrase, N-terminal SAM-like domain SRIM_RS41420 PF00665 Integrase core domain SRIM_RS41425 PF02195 ParB-like nuclease domain SRIM_RS41425 PF17762 HTH domain found in ParB protein SRIM_RS41430 PF13614 AAA domain SRIM_RS41500 PF00990 Diguanylate cyclase, GGDEF domain SRIM_RS41545 PF03668 P-loop ATPase protein family SRIM_RS41670 PF00392 Bacterial regulatory proteins, gntR family SRIM_RS41670 PF07702 UTRA domain SRIM_RS41810 PF16859 Tetracyclin repressor-like, C-terminal domain SRIM_RS41810 PF00440 Bacterial regulatory proteins, tetR family SRIM_RS41865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRIM_RS41865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRIM_RS41865 PF02770 Acyl-CoA dehydrogenase, middle domain SRIM_RS41870 PF00202 Aminotransferase class-III SRIM_RS41875 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SRIM_RS41875 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SRIM_RS41945 PF03793 PASTA domain SRIM_RS41945 PF00069 Protein kinase domain SRIM_RS41985 PF02661 Fic/DOC family SRIM_RS41985 PF13784 Fic/DOC family N-terminal SRIM_RS42110 PF02735 Ku70/Ku80 beta-barrel domain SRIM_RS42155 PF00580 UvrD/REP helicase N-terminal domain SRIM_RS42155 PF12705 PD-(D/E)XK nuclease superfamily SRIM_RS42155 PF13361 UvrD-like helicase C-terminal domain