locus-tag	class	description
FYM93_RS00065	COG2124	cytochrome p450
FYM93_RS00070	COG1024	Enoyl-CoA hydratase
FYM93_RS00080	COG1119	ATPase activity
FYM93_RS00085	COG0142	geranyltranstransferase activity
FYM93_RS00095	COG0784	Response regulator, receiver
FYM93_RS00105	COG4251	negative regulation of phosphorylation
FYM93_RS00125	COG0583	DNA-binding transcription factor activity
FYM93_RS00140	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
FYM93_RS00200	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS00225	COG2271	Major facilitator Superfamily
FYM93_RS00230	COG0477	Major facilitator Superfamily
FYM93_RS00250	COG0318	PFAM AMP-dependent synthetase and ligase
FYM93_RS00540	COG1309	transcriptional regulator
FYM93_RS00560	COG1733	regulation of RNA biosynthetic process
FYM93_RS00565	COG0702	epimerase
FYM93_RS00615	COG0745	RESPONSE REGULATOR receiver
FYM93_RS00620	COG2205	protein histidine kinase activity
FYM93_RS00650	COG1278	Cold shock
FYM93_RS00760	COG2197	response regulator
FYM93_RS00775	COG0107	imidazoleglycerol-phosphate synthase activity
FYM93_RS00780	COG1063	alcohol dehydrogenase
FYM93_RS00795	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FYM93_RS00945	COG1181	Belongs to the D-alanine--D-alanine ligase family
FYM93_RS00975	COG0561	phosphatase activity
FYM93_RS00995	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
FYM93_RS01000	COG3845	ABC transporter
FYM93_RS01005	COG1122	ATPase activity
FYM93_RS01020	COG0667	Aldo Keto reductase
FYM93_RS01030	COG2801	Transposase and inactivated derivatives
FYM93_RS01045	COG3655	Transcriptional regulator
FYM93_RS01075	COG1136	(ABC) transporter
FYM93_RS01090	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS01095	COG1309	transcriptional regulator
FYM93_RS01125	COG2207	Transcriptional regulator
FYM93_RS01155	COG3479	Phenolic acid decarboxylase
FYM93_RS01190	COG1595	DNA-templated transcription, initiation
FYM93_RS01220	COG2124	cytochrome p450
FYM93_RS01240	COG1819	glycosyl
FYM93_RS01255	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS01290	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FYM93_RS01300	COG0431	NADPH-dependent FMN reductase
FYM93_RS01360	COG1501	Belongs to the glycosyl hydrolase 31 family
FYM93_RS01370	COG1175	transmembrane transport
FYM93_RS01375	COG0395	ABC-type sugar transport system, permease component
FYM93_RS01410	COG2353	YceI-like domain
FYM93_RS01415	COG2353	YceI-like domain
FYM93_RS01425	COG2267	carboxylic ester hydrolase activity
FYM93_RS01455	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FYM93_RS01460	COG3938	Belongs to the proline racemase family
FYM93_RS01465	COG1012	belongs to the aldehyde dehydrogenase family
FYM93_RS01495	COG3291	Pkd domain containing protein
FYM93_RS01500	COG0006	proline dipeptidase activity
FYM93_RS01600	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
FYM93_RS01605	COG3483	tryptophan 2,3-dioxygenase activity
FYM93_RS01635	COG0515	serine threonine protein kinase
FYM93_RS01635	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYM93_RS01640	COG2135	peptidase activity
FYM93_RS01685	COG2197	response regulator
FYM93_RS01690	COG4585	Histidine kinase
FYM93_RS01710	COG2205	protein histidine kinase activity
FYM93_RS01740	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FYM93_RS01750	COG0019	diaminopimelate decarboxylase activity
FYM93_RS01755	COG4264	IucA IucC family
FYM93_RS01765	COG0745	RESPONSE REGULATOR receiver
FYM93_RS01770	COG2205	protein histidine kinase activity
FYM93_RS01835	COG1172	Belongs to the binding-protein-dependent transport system permease family
FYM93_RS01840	COG1129	ABC transporter
FYM93_RS01850	COG2160	L-arabinose isomerase activity
FYM93_RS01865	COG1609	Transcriptional regulator
FYM93_RS01875	COG3266	domain, Protein
FYM93_RS01875	COG0515	serine threonine protein kinase
FYM93_RS01895	COG0151	Belongs to the GarS family
FYM93_RS02045	COG0583	DNA-binding transcription factor activity
FYM93_RS02060	COG2318	DinB family
FYM93_RS02065	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
FYM93_RS02065	COG5479	isomerase activity
FYM93_RS02085	COG0412	Dienelactone hydrolase
FYM93_RS02105	COG4257	antibiotic catabolic process
FYM93_RS02110	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS02120	COG0372	Belongs to the citrate synthase family
FYM93_RS02175	COG1595	DNA-templated transcription, initiation
FYM93_RS02180	COG2318	DinB family
FYM93_RS02200	COG5002	protein histidine kinase activity
FYM93_RS02240	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FYM93_RS02260	COG0318	PFAM AMP-dependent synthetase and ligase
FYM93_RS02265	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYM93_RS02275	COG0318	PFAM AMP-dependent synthetase and ligase
FYM93_RS02280	COG3380	Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers
FYM93_RS02310	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FYM93_RS02320	COG0673	inositol 2-dehydrogenase activity
FYM93_RS02405	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FYM93_RS02420	COG0367	asparagine synthase
FYM93_RS02430	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FYM93_RS02435	COG0456	acetyltransferase
FYM93_RS02445	COG1131	(ABC) transporter
FYM93_RS02455	COG3251	PFAM MbtH domain protein
FYM93_RS02485	COG2072	flavoprotein involved in K transport
FYM93_RS02510	COG0445	tRNA wobble uridine modification
FYM93_RS02515	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FYM93_RS02545	COG2706	6-phosphogluconolactonase activity
FYM93_RS02555	COG3387	PFAM Glycoside hydrolase 15-related
FYM93_RS02560	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FYM93_RS02565	COG3265	gluconokinase activity
FYM93_RS02595	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FYM93_RS02595	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FYM93_RS02605	COG0730	response to heat
FYM93_RS02620	COG5297	Belongs to the glycosyl hydrolase family 6
FYM93_RS02625	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
FYM93_RS02635	COG0477	Major facilitator Superfamily
FYM93_RS02660	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS02675	COG1309	transcriptional regulator
FYM93_RS02700	COG2814	Major facilitator Superfamily
FYM93_RS02715	COG1366	Belongs to the anti-sigma-factor antagonist family
FYM93_RS02720	COG1366	Belongs to the anti-sigma-factor antagonist family
FYM93_RS02725	COG2172	sigma factor antagonist activity
FYM93_RS02770	COG0248	Ppx GppA phosphatase
FYM93_RS02795	COG3469	chitinase activity
FYM93_RS02805	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
FYM93_RS02815	COG2814	Major facilitator Superfamily
FYM93_RS02865	COG2197	response regulator
FYM93_RS02870	COG4585	Histidine kinase
FYM93_RS02925	COG2045	Belongs to the ComB family
FYM93_RS02940	COG2172	sigma factor antagonist activity
FYM93_RS02940	COG2208	phosphoserine phosphatase activity
FYM93_RS02940	COG1366	Belongs to the anti-sigma-factor antagonist family
FYM93_RS02945	COG0590	tRNA wobble adenosine to inosine editing
FYM93_RS02960	COG0583	DNA-binding transcription factor activity
FYM93_RS02965	COG3387	PFAM Glycoside hydrolase 15-related
FYM93_RS02980	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
FYM93_RS02995	COG0586	Pfam SNARE associated Golgi protein
FYM93_RS03000	COG0671	phosphoesterase, PA-phosphatase related
FYM93_RS03010	COG2814	Major facilitator Superfamily
FYM93_RS03015	COG1335	isochorismatase
FYM93_RS03030	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
FYM93_RS03060	COG0572	uridine kinase
FYM93_RS03110	COG1309	transcriptional regulator
FYM93_RS03130	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FYM93_RS03165	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS03200	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
FYM93_RS03245	COG0300	oxidoreductase activity
FYM93_RS03250	COG4948	Mandelate Racemase Muconate Lactonizing
FYM93_RS03255	COG0247	lactate metabolic process
FYM93_RS03255	COG0277	FAD linked oxidase domain protein
FYM93_RS03305	COG2274	protein secretion by the type I secretion system
FYM93_RS03330	COG4221	oxidoreductase activity
FYM93_RS03350	COG2890	protein-(glutamine-N5) methyltransferase activity
FYM93_RS03365	COG0596	Alpha beta hydrolase
FYM93_RS03375	COG4974	Belongs to the 'phage' integrase family
FYM93_RS03410	COG0583	DNA-binding transcription factor activity
FYM93_RS03415	COG2814	Major facilitator Superfamily
FYM93_RS03430	COG1733	regulation of RNA biosynthetic process
FYM93_RS03490	COG0667	Aldo Keto reductase
FYM93_RS03515	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
FYM93_RS03520	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FYM93_RS03525	COG3629	intracellular signal transduction
FYM93_RS03535	COG0657	acetylesterase activity
FYM93_RS03570	COG2124	cytochrome p450
FYM93_RS03590	COG0435	Glutathione S-transferase
FYM93_RS03620	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FYM93_RS03625	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
FYM93_RS03630	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYM93_RS03640	COG2111	Na H antiporter
FYM93_RS03670	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
FYM93_RS03670	COG1796	DNA polymerase
FYM93_RS03675	COG0546	phosphoglycolate phosphatase activity
FYM93_RS03720	COG2706	6-phosphogluconolactonase activity
FYM93_RS03730	COG1309	transcriptional regulator
FYM93_RS03740	COG1357	PFAM Pentapeptide repeats (8 copies)
FYM93_RS03760	COG0247	lactate metabolic process
FYM93_RS03765	COG1139	Iron-sulfur cluster binding protein
FYM93_RS03770	COG1556	Lactate utilization protein
FYM93_RS03790	COG1174	glycine betaine transport
FYM93_RS03795	COG0542	response to heat
FYM93_RS03815	COG1191	sigma factor activity
FYM93_RS03895	COG1090	epimerase
FYM93_RS03910	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FYM93_RS03920	COG0640	Transcriptional regulator
FYM93_RS03940	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYM93_RS03940	COG0515	serine threonine protein kinase
FYM93_RS03945	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS03965	COG1609	Transcriptional regulator
FYM93_RS03980	COG0726	polysaccharide deacetylase
FYM93_RS03985	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
FYM93_RS03990	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FYM93_RS04015	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FYM93_RS04020	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FYM93_RS04030	COG3251	PFAM MbtH domain protein
FYM93_RS04040	COG3340	Belongs to the peptidase S51 family
FYM93_RS04050	COG2197	response regulator
FYM93_RS04075	COG2124	cytochrome p450
FYM93_RS04125	COG0326	Molecular chaperone. Has ATPase activity
FYM93_RS04130	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FYM93_RS04135	COG1993	acr, cog1993
FYM93_RS04140	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FYM93_RS04175	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FYM93_RS04180	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
FYM93_RS04180	COG3608	succinylglutamate desuccinylase aspartoacylase
FYM93_RS04200	COG3608	succinylglutamate desuccinylase aspartoacylase
FYM93_RS04200	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
FYM93_RS04210	COG0242	peptide deformylase activity
FYM93_RS04220	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FYM93_RS04280	COG1262	PFAM Formylglycine-generating sulfatase enzyme
FYM93_RS04285	COG0121	glutamine amidotransferase
FYM93_RS04290	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
FYM93_RS04295	COG2182	Extracellular solute-binding protein
FYM93_RS04300	COG3360	Dodecin
FYM93_RS04310	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FYM93_RS04340	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FYM93_RS04345	COG1053	succinate dehydrogenase
FYM93_RS04355	COG0583	DNA-binding transcription factor activity
FYM93_RS04395	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
FYM93_RS04395	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FYM93_RS04415	COG0531	amino acid
FYM93_RS04430	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FYM93_RS04490	COG3537	Alpha-1,2-mannosidase
FYM93_RS04510	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FYM93_RS04520	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
FYM93_RS04555	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
FYM93_RS04560	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
FYM93_RS04615	COG0667	Aldo Keto reductase
FYM93_RS04645	COG0601	transmembrane transport
FYM93_RS04655	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS04690	COG2308	Evidence 4 Homologs of previously reported genes of
FYM93_RS04690	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
FYM93_RS04715	COG1132	(ABC) transporter
FYM93_RS04735	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
FYM93_RS04755	COG1278	Cold shock
FYM93_RS04760	COG0513	Belongs to the DEAD box helicase family
FYM93_RS04820	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
FYM93_RS04820	COG0235	Class ii aldolase
FYM93_RS04825	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
FYM93_RS04845	COG3415	Transposase
FYM93_RS04845	COG2801	Transposase and inactivated derivatives
FYM93_RS04895	COG4221	oxidoreductase activity
FYM93_RS04895	COG3321	synthase
FYM93_RS04895	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS04895	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FYM93_RS04905	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FYM93_RS04925	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FYM93_RS04935	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FYM93_RS04950	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
FYM93_RS04955	COG2079	MmgE PrpD family protein
FYM93_RS04990	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FYM93_RS05055	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FYM93_RS05060	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
FYM93_RS05065	COG2080	2 iron, 2 sulfur cluster binding
FYM93_RS05070	COG1132	(ABC) transporter
FYM93_RS05080	COG1024	Enoyl-CoA hydratase
FYM93_RS05110	COG0531	amino acid
FYM93_RS05115	COG0668	transmembrane transport
FYM93_RS05125	COG2838	Isocitrate dehydrogenase
FYM93_RS05140	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FYM93_RS05155	COG2124	cytochrome p450
FYM93_RS05210	COG2267	carboxylic ester hydrolase activity
FYM93_RS05270	COG2197	response regulator
FYM93_RS05280	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FYM93_RS05285	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FYM93_RS05295	COG1126	abc transporter atp-binding protein
FYM93_RS05310	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
FYM93_RS05315	COG0531	amino acid
FYM93_RS05325	COG0702	epimerase
FYM93_RS05330	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FYM93_RS05335	COG2197	response regulator
FYM93_RS05340	COG4585	Histidine kinase
FYM93_RS05350	COG1136	(ABC) transporter
FYM93_RS05350	COG0577	efflux transmembrane transporter activity
FYM93_RS05355	COG3275	phosphorelay sensor kinase activity
FYM93_RS05370	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FYM93_RS05375	COG1584	GPR1 FUN34 yaaH family protein
FYM93_RS05380	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FYM93_RS05385	COG0154	amidase activity
FYM93_RS05415	COG0673	inositol 2-dehydrogenase activity
FYM93_RS05420	COG0673	inositol 2-dehydrogenase activity
FYM93_RS05450	COG2124	cytochrome p450
FYM93_RS05475	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FYM93_RS05515	COG0667	Aldo Keto reductase
FYM93_RS05525	COG0318	PFAM AMP-dependent synthetase and ligase
FYM93_RS05530	COG0183	Belongs to the thiolase family
FYM93_RS05535	COG2267	carboxylic ester hydrolase activity
FYM93_RS05560	COG0561	phosphatase activity
FYM93_RS05570	COG0174	glutamine synthetase
FYM93_RS05595	COG3629	intracellular signal transduction
FYM93_RS05595	COG3903	Transcriptional regulator
FYM93_RS05625	COG3629	intracellular signal transduction
FYM93_RS05625	COG3903	Transcriptional regulator
FYM93_RS05645	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
FYM93_RS05655	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS05675	COG3959	Transketolase, thiamine diphosphate binding domain
FYM93_RS05680	COG3958	Transketolase
FYM93_RS05695	COG0583	DNA-binding transcription factor activity
FYM93_RS05700	COG0156	8-amino-7-oxononanoate synthase activity
FYM93_RS05705	COG1063	alcohol dehydrogenase
FYM93_RS05760	COG1473	amidohydrolase
FYM93_RS05775	COG0842	Transport permease protein
FYM93_RS05780	COG1131	(ABC) transporter
FYM93_RS05820	COG2755	lipolytic protein G-D-S-L family
FYM93_RS05825	COG2365	Tyrosine phosphatase family
FYM93_RS05845	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
FYM93_RS05850	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
FYM93_RS05865	COG1657	PFAM Prenyltransferase squalene oxidase
FYM93_RS05875	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
FYM93_RS05885	COG1562	ergosterol biosynthetic process
FYM93_RS05890	COG1134	teichoic acid transport
FYM93_RS05935	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
FYM93_RS05950	COG1024	Enoyl-CoA hydratase
FYM93_RS05965	COG4977	sequence-specific DNA binding
FYM93_RS05970	COG2183	response to ionizing radiation
FYM93_RS05980	COG0488	(ABC) transporter
FYM93_RS05990	COG2936	dipeptidyl-peptidase activity
FYM93_RS06005	COG1113	amino acid transport
FYM93_RS06015	COG1024	Enoyl-CoA hydratase
FYM93_RS06015	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYM93_RS06020	COG0183	Belongs to the thiolase family
FYM93_RS06025	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYM93_RS06030	COG3268	Saccharopine dehydrogenase
FYM93_RS06040	COG1515	deoxyribonuclease V activity
FYM93_RS06075	COG0488	(ABC) transporter
FYM93_RS06080	COG1834	amidinotransferase
FYM93_RS06110	COG1793	dna ligase
FYM93_RS06130	COG0477	Major facilitator Superfamily
FYM93_RS06135	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
FYM93_RS06165	COG3511	phospholipase C
FYM93_RS06190	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FYM93_RS06195	COG1486	melibiose metabolic process
FYM93_RS06215	COG0789	Transcriptional regulator
FYM93_RS06220	COG0667	Aldo Keto reductase
FYM93_RS06235	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FYM93_RS06250	COG0166	Belongs to the GPI family
FYM93_RS06255	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
FYM93_RS06260	COG0588	phosphoglycerate mutase activity
FYM93_RS06280	COG3467	pyridoxamine 5'-phosphate
FYM93_RS06315	COG2723	6-phospho-beta-galactosidase activity
FYM93_RS06320	COG0395	ABC-type sugar transport system, permease component
FYM93_RS06325	COG1175	transmembrane transport
FYM93_RS06330	COG2182	Extracellular solute-binding protein
FYM93_RS06365	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FYM93_RS06380	COG4106	trans-aconitate 2-methyltransferase activity
FYM93_RS06405	COG0028	Belongs to the TPP enzyme family
FYM93_RS06405	COG4032	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
FYM93_RS06455	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FYM93_RS06460	COG0006	proline dipeptidase activity
FYM93_RS06475	COG0156	8-amino-7-oxononanoate synthase activity
FYM93_RS06485	COG4569	acetaldehyde dehydrogenase (acetylating) activity
FYM93_RS06490	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FYM93_RS06495	COG2423	ornithine cyclodeaminase activity
FYM93_RS06510	COG0569	domain protein
FYM93_RS06510	COG0475	glutathione-regulated potassium exporter activity
FYM93_RS06540	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FYM93_RS06545	COG3251	PFAM MbtH domain protein
FYM93_RS06555	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FYM93_RS06620	COG1335	isochorismatase
FYM93_RS06630	COG3537	Alpha-1,2-mannosidase
FYM93_RS06640	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FYM93_RS06645	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FYM93_RS06650	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS06655	COG1846	Transcriptional regulator
FYM93_RS06685	COG0656	L-ascorbic acid biosynthetic process
FYM93_RS06700	COG4221	oxidoreductase activity
FYM93_RS06715	COG4106	trans-aconitate 2-methyltransferase activity
FYM93_RS06720	COG2154	pterin-4-alpha-carbinolamine dehydratase
FYM93_RS06750	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
FYM93_RS06775	COG0028	Belongs to the TPP enzyme family
FYM93_RS06785	COG0693	protein deglycase activity
FYM93_RS06795	COG0488	(ABC) transporter
FYM93_RS06805	COG1597	lipid kinase activity
FYM93_RS06870	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FYM93_RS06875	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FYM93_RS06900	COG1619	proteins homologs of microcin C7 resistance protein MccF
FYM93_RS06910	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FYM93_RS06915	COG2362	D-Aminopeptidase
FYM93_RS06920	COG0038	chloride channel
FYM93_RS06935	COG2172	sigma factor antagonist activity
FYM93_RS06935	COG2208	phosphoserine phosphatase activity
FYM93_RS06935	COG1366	Belongs to the anti-sigma-factor antagonist family
FYM93_RS06965	COG1295	ribonuclease BN
FYM93_RS06980	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYM93_RS06990	COG0604	alcohol dehydrogenase
FYM93_RS06995	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FYM93_RS06995	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FYM93_RS07000	COG2301	Belongs to the HpcH HpaI aldolase family
FYM93_RS07010	COG1960	acyl-CoA dehydrogenase activity
FYM93_RS07015	COG0688	phosphatidylethanolamine metabolic process
FYM93_RS07025	COG1929	Belongs to the glycerate kinase type-1 family
FYM93_RS07040	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FYM93_RS07050	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FYM93_RS07105	COG0318	PFAM AMP-dependent synthetase and ligase
FYM93_RS07150	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
FYM93_RS07155	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
FYM93_RS07160	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
FYM93_RS07170	COG0531	amino acid
FYM93_RS07180	COG0095	Lipoate-protein ligase
FYM93_RS07215	COG0542	response to heat
FYM93_RS07285	COG1953	Uracil, thiamine, allantoin
FYM93_RS07295	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FYM93_RS07310	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FYM93_RS07330	COG0542	response to heat
FYM93_RS07335	COG0405	Gamma-glutamyltransferase
FYM93_RS07360	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYM93_RS07380	COG1725	Transcriptional regulator
FYM93_RS07385	COG1131	(ABC) transporter
FYM93_RS07455	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FYM93_RS07470	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FYM93_RS07475	COG0017	Asparaginyl-tRNA synthetase
FYM93_RS07480	COG0069	glutamate synthase activity
FYM93_RS07490	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FYM93_RS07505	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FYM93_RS07515	COG1940	carbohydrate kinase activity
FYM93_RS07520	COG1129	ABC transporter
FYM93_RS07535	COG2188	Transcriptional regulator
FYM93_RS07540	COG0673	inositol 2-dehydrogenase activity
FYM93_RS07575	COG4266	Belongs to the allantoicase family
FYM93_RS07580	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FYM93_RS07585	COG1414	Transcriptional regulator
FYM93_RS07605	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FYM93_RS07615	COG2091	lysine biosynthetic process via aminoadipic acid
FYM93_RS07635	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FYM93_RS07645	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FYM93_RS07650	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FYM93_RS07660	COG0017	Asparaginyl-tRNA synthetase
FYM93_RS07680	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FYM93_RS07710	COG0384	phenazine biosynthesis protein PhzF
FYM93_RS07725	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FYM93_RS07770	COG1733	regulation of RNA biosynthetic process
FYM93_RS07775	COG0436	Aminotransferase
FYM93_RS07785	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
FYM93_RS07790	COG1012	belongs to the aldehyde dehydrogenase family
FYM93_RS07795	COG1063	alcohol dehydrogenase
FYM93_RS07810	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
FYM93_RS07815	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FYM93_RS07845	COG0367	asparagine synthase
FYM93_RS07860	COG1454	alcohol dehydrogenase
FYM93_RS07865	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FYM93_RS07890	COG2368	4-hydroxyphenylacetate
FYM93_RS07910	COG4555	ABC transporter
FYM93_RS07940	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS07945	COG0406	alpha-ribazole phosphatase activity
FYM93_RS07975	COG2233	PERMEase
FYM93_RS07990	COG2351	hydroxyisourate hydrolase activity
FYM93_RS08010	COG3622	Belongs to the hyi family
FYM93_RS08015	COG2084	Dehydrogenase
FYM93_RS08020	COG0753	catalase activity
FYM93_RS08030	COG3960	tartronate-semialdehyde synthase activity
FYM93_RS08040	COG0318	PFAM AMP-dependent synthetase and ligase
FYM93_RS08045	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FYM93_RS08050	COG2197	response regulator
FYM93_RS08065	COG2249	NAD(P)H dehydrogenase (quinone) activity
FYM93_RS08080	COG1653	transport
FYM93_RS08095	COG0515	serine threonine protein kinase
FYM93_RS08105	COG0726	polysaccharide deacetylase
FYM93_RS08125	COG2252	PERMEase
FYM93_RS08130	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FYM93_RS08160	COG1802	Transcriptional regulator
FYM93_RS08175	COG0028	Belongs to the TPP enzyme family
FYM93_RS08195	COG2267	carboxylic ester hydrolase activity
FYM93_RS08205	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FYM93_RS08225	COG1162	GTPase activity
FYM93_RS08235	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FYM93_RS08245	COG0473	3-isopropylmalate dehydrogenase activity
FYM93_RS08245	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FYM93_RS08260	COG0583	DNA-binding transcription factor activity
FYM93_RS08265	COG2814	Major facilitator Superfamily
FYM93_RS08270	COG1942	4-Oxalocrotonate Tautomerase
FYM93_RS08310	COG2040	homocysteine
FYM93_RS08325	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
FYM93_RS08350	COG1960	acyl-CoA dehydrogenase activity
FYM93_RS08365	COG0456	acetyltransferase
FYM93_RS08370	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FYM93_RS08380	COG0175	sulfate reduction
FYM93_RS08385	COG0529	Catalyzes the synthesis of activated sulfate
FYM93_RS08410	COG1116	anion transmembrane transporter activity
FYM93_RS08410	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FYM93_RS08430	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FYM93_RS08505	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FYM93_RS08575	COG1174	glycine betaine transport
FYM93_RS08585	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FYM93_RS08590	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FYM93_RS08625	COG2326	polyphosphate kinase activity
FYM93_RS08630	COG0723	plastoquinol--plastocyanin reductase activity
FYM93_RS08630	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYM93_RS08645	COG4152	abc transporter atp-binding protein
FYM93_RS08660	COG3220	belongs to the UPF0276 family
FYM93_RS08675	COG3253	May function as heme-dependent peroxidase
FYM93_RS08685	COG0446	pyridine nucleotide-disulphide oxidoreductase
FYM93_RS08695	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
FYM93_RS08710	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
FYM93_RS08715	COG0183	Belongs to the thiolase family
FYM93_RS08720	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYM93_RS08720	COG1024	Enoyl-CoA hydratase
FYM93_RS08735	COG0531	amino acid
FYM93_RS08740	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
FYM93_RS08745	COG4214	carbohydrate transport
FYM93_RS08755	COG4213	ABC transporter substrate-binding protein
FYM93_RS08760	COG1940	carbohydrate kinase activity
FYM93_RS08765	COG0395	ABC-type sugar transport system, permease component
FYM93_RS08770	COG1175	transmembrane transport
FYM93_RS08775	COG1653	transport
FYM93_RS08825	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FYM93_RS08845	COG1522	sequence-specific DNA binding
FYM93_RS08850	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FYM93_RS08865	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FYM93_RS08865	COG1017	nitric oxide dioxygenase activity
FYM93_RS08875	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS08915	COG1472	Belongs to the glycosyl hydrolase 3 family
FYM93_RS08920	COG0395	ABC-type sugar transport system, permease component
FYM93_RS08925	COG1175	transmembrane transport
FYM93_RS08930	COG2182	Extracellular solute-binding protein
FYM93_RS08935	COG2188	Transcriptional regulator
FYM93_RS08950	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FYM93_RS08960	COG0477	Major facilitator Superfamily
FYM93_RS08965	COG0477	Major facilitator Superfamily
FYM93_RS08970	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FYM93_RS08985	COG0318	PFAM AMP-dependent synthetase and ligase
FYM93_RS09000	COG1012	belongs to the aldehyde dehydrogenase family
FYM93_RS09010	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FYM93_RS09035	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FYM93_RS09040	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FYM93_RS09045	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FYM93_RS09055	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FYM93_RS09060	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FYM93_RS09065	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FYM93_RS09070	COG2814	Major facilitator Superfamily
FYM93_RS09085	COG3629	intracellular signal transduction
FYM93_RS09090	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FYM93_RS09155	COG1024	Enoyl-CoA hydratase
FYM93_RS09165	COG0531	amino acid
FYM93_RS09170	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FYM93_RS09175	COG2235	arginine
FYM93_RS09190	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FYM93_RS09220	COG1799	cell septum assembly
FYM93_RS09270	COG0300	oxidoreductase activity
FYM93_RS09335	COG1846	Transcriptional regulator
FYM93_RS09340	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FYM93_RS09415	COG3903	Transcriptional regulator
FYM93_RS09415	COG3629	intracellular signal transduction
FYM93_RS09430	COG1024	Enoyl-CoA hydratase
FYM93_RS09490	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FYM93_RS09515	COG1309	transcriptional regulator
FYM93_RS09525	COG0667	Aldo Keto reductase
FYM93_RS09530	COG3321	synthase
FYM93_RS09530	COG0604	alcohol dehydrogenase
FYM93_RS09575	COG1857	crispr-associated protein
FYM93_RS09590	COG1518	maintenance of DNA repeat elements
FYM93_RS09600	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FYM93_RS09605	COG0531	amino acid
FYM93_RS09610	COG0569	domain protein
FYM93_RS09645	COG0756	dUTP diphosphatase activity
FYM93_RS09670	COG2205	protein histidine kinase activity
FYM93_RS09675	COG0745	RESPONSE REGULATOR receiver
FYM93_RS09685	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
FYM93_RS09720	COG1435	thymidine kinase activity
FYM93_RS09740	COG0045	succinate-CoA ligase (ADP-forming) activity
FYM93_RS09740	COG1042	CoA-binding domain protein
FYM93_RS09740	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FYM93_RS09750	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYM93_RS09755	COG1802	Transcriptional regulator
FYM93_RS09770	COG0612	Peptidase, M16
FYM93_RS09775	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FYM93_RS09785	COG0372	Belongs to the citrate synthase family
FYM93_RS09790	COG0372	Belongs to the citrate synthase family
FYM93_RS09800	COG3290	protein histidine kinase activity
FYM93_RS09810	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYM93_RS09820	COG4565	transcriptional regulatory protein
FYM93_RS09825	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FYM93_RS09835	COG2197	response regulator
FYM93_RS09855	COG0187	DNA topoisomerase II activity
FYM93_RS09870	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FYM93_RS09875	COG2186	Transcriptional regulator
FYM93_RS09910	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
FYM93_RS09945	COG0588	phosphoglycerate mutase activity
FYM93_RS09965	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FYM93_RS09970	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FYM93_RS09975	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FYM93_RS10005	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FYM93_RS10015	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FYM93_RS10020	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
FYM93_RS10030	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
FYM93_RS10045	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FYM93_RS10050	COG3433	isochorismatase activity
FYM93_RS10050	COG2226	methyltransferase
FYM93_RS10050	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FYM93_RS10065	COG1280	lysine exporter protein (LysE YggA)
FYM93_RS10105	COG2205	protein histidine kinase activity
FYM93_RS10110	COG0745	RESPONSE REGULATOR receiver
FYM93_RS10115	COG1126	abc transporter atp-binding protein
FYM93_RS10120	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYM93_RS10125	COG0765	amino acid transport
FYM93_RS10130	COG0765	amino acid transport
FYM93_RS10150	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FYM93_RS10160	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FYM93_RS10205	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FYM93_RS10210	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FYM93_RS10215	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FYM93_RS10240	COG1201	RNA secondary structure unwinding
FYM93_RS10245	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FYM93_RS10255	COG0783	Belongs to the Dps family
FYM93_RS10260	COG1396	sequence-specific DNA binding
FYM93_RS10265	COG1058	Belongs to the CinA family
FYM93_RS10265	COG1546	Belongs to the CinA family
FYM93_RS10275	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FYM93_RS10285	COG1674	ftsk spoiiie
FYM93_RS10295	COG2205	protein histidine kinase activity
FYM93_RS10295	COG0784	Response regulator, receiver
FYM93_RS10305	COG2770	Histidine kinase
FYM93_RS10305	COG2208	phosphoserine phosphatase activity
FYM93_RS10340	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
FYM93_RS10345	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FYM93_RS10350	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
FYM93_RS10370	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
FYM93_RS10375	COG0612	Peptidase, M16
FYM93_RS10380	COG1185	polyribonucleotide nucleotidyltransferase activity
FYM93_RS10385	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
FYM93_RS10405	COG1674	ftsk spoiiie
FYM93_RS10435	COG1404	Belongs to the peptidase S8 family
FYM93_RS10455	COG3266	domain, Protein
FYM93_RS10470	COG0455	bacterial-type flagellum organization
FYM93_RS10485	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FYM93_RS10490	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
FYM93_RS10515	COG0779	Required for maturation of 30S ribosomal subunits
FYM93_RS10550	COG0442	prolyl-tRNA aminoacylation
FYM93_RS10555	COG1247	-acetyltransferase
FYM93_RS10580	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
FYM93_RS10585	COG0750	zinc metalloprotease
FYM93_RS10590	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FYM93_RS10605	COG1733	regulation of RNA biosynthetic process
FYM93_RS10610	COG0702	epimerase
FYM93_RS10625	COG2508	Transcriptional regulator
FYM93_RS10655	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYM93_RS10660	COG1177	transmembrane transport
FYM93_RS10670	COG3842	ATPase activity
FYM93_RS10695	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FYM93_RS10700	COG0584	glycerophosphoryl diester phosphodiesterase
FYM93_RS10710	COG0784	Response regulator, receiver
FYM93_RS10710	COG5002	protein histidine kinase activity
FYM93_RS10710	COG2198	Histidine kinase
FYM93_RS10720	COG2172	sigma factor antagonist activity
FYM93_RS10725	COG1366	Belongs to the anti-sigma-factor antagonist family
FYM93_RS10730	COG1366	Belongs to the anti-sigma-factor antagonist family
FYM93_RS10750	COG1653	transport
FYM93_RS10755	COG1175	transmembrane transport
FYM93_RS10760	COG0395	ABC-type sugar transport system, permease component
FYM93_RS10770	COG1012	belongs to the aldehyde dehydrogenase family
FYM93_RS10780	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FYM93_RS10785	COG4181	ATPase activity
FYM93_RS10805	COG3842	ATPase activity
FYM93_RS10810	COG4208	sulfate ABC transporter
FYM93_RS10820	COG0820	rRNA (adenine-C2-)-methyltransferase activity
FYM93_RS10830	COG0575	Belongs to the CDS family
FYM93_RS10835	COG0233	cytoplasmic translational termination
FYM93_RS10840	COG0528	UMP kinase activity
FYM93_RS10845	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
FYM93_RS10850	COG0052	Belongs to the universal ribosomal protein uS2 family
FYM93_RS10855	COG4942	peptidase
FYM93_RS10865	COG1191	sigma factor activity
FYM93_RS10880	COG0792	nuclease activity
FYM93_RS10900	COG0681	Belongs to the peptidase S26 family
FYM93_RS10915	COG0335	large ribosomal subunit rRNA binding
FYM93_RS10920	COG0336	Belongs to the RNA methyltransferase TrmD family
FYM93_RS10925	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FYM93_RS10930	COG1837	Belongs to the UPF0109 family
FYM93_RS10935	COG0228	four-way junction DNA binding
FYM93_RS10950	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FYM93_RS10960	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
FYM93_RS10990	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
FYM93_RS11005	COG0477	Major facilitator Superfamily
FYM93_RS11025	COG1254	Belongs to the acylphosphatase family
FYM93_RS11040	COG1733	regulation of RNA biosynthetic process
FYM93_RS11045	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FYM93_RS11050	COG0571	ribonuclease III activity
FYM93_RS11055	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FYM93_RS11070	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
FYM93_RS11075	COG0742	ribosomal rna small subunit methyltransferase
FYM93_RS11085	COG0326	Molecular chaperone. Has ATPase activity
FYM93_RS11095	COG1461	Dihydroxyacetone kinase
FYM93_RS11100	COG0227	Belongs to the bacterial ribosomal protein bL28 family
FYM93_RS11115	COG0351	phosphomethylpyrimidine kinase
FYM93_RS11135	COG1181	Belongs to the D-alanine--D-alanine ligase family
FYM93_RS11140	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
FYM93_RS11150	COG1920	GTP binding
FYM93_RS11160	COG0776	regulation of translation
FYM93_RS11170	COG0066	3-isopropylmalate dehydratase activity
FYM93_RS11175	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
FYM93_RS11180	COG1414	Transcriptional regulator
FYM93_RS11225	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FYM93_RS11230	COG0179	Fumarylacetoacetate (FAA) hydrolase
FYM93_RS11240	COG5002	protein histidine kinase activity
FYM93_RS11245	COG2018	Roadblock/LC7 domain
FYM93_RS11265	COG2018	Roadblock/LC7 domain
FYM93_RS11285	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FYM93_RS11290	COG2353	YceI-like domain
FYM93_RS11330	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FYM93_RS11335	COG0477	Major facilitator Superfamily
FYM93_RS11355	COG2957	Belongs to the agmatine deiminase family
FYM93_RS11360	COG0804	urea catabolic process
FYM93_RS11365	COG0832	Belongs to the urease beta subunit family
FYM93_RS11365	COG0831	urea catabolic process
FYM93_RS11370	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FYM93_RS11375	COG0473	3-isopropylmalate dehydrogenase activity
FYM93_RS11390	COG2130	NADP-dependent
FYM93_RS11395	COG1012	belongs to the aldehyde dehydrogenase family
FYM93_RS11405	COG3835	regulator
FYM93_RS11415	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FYM93_RS11420	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FYM93_RS11425	COG0440	acetolactate synthase activity
FYM93_RS11450	COG0667	Aldo Keto reductase
FYM93_RS11475	COG2409	Drug exporters of the RND superfamily
FYM93_RS11480	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FYM93_RS11490	COG0154	amidase activity
FYM93_RS11495	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FYM93_RS11515	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FYM93_RS11525	COG4221	oxidoreductase activity
FYM93_RS11530	COG1611	Belongs to the LOG family
FYM93_RS11545	COG0482	sulfurtransferase activity
FYM93_RS11585	COG0583	DNA-binding transcription factor activity
FYM93_RS11605	COG2860	membrane
FYM93_RS11610	COG0308	aminopeptidase N
FYM93_RS11625	COG0601	transmembrane transport
FYM93_RS11630	COG0747	negative chemotaxis
FYM93_RS11635	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYM93_RS11655	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FYM93_RS11660	COG0509	glycine decarboxylation via glycine cleavage system
FYM93_RS11665	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FYM93_RS11670	COG1760	l-serine dehydratase
FYM93_RS11715	COG1024	Enoyl-CoA hydratase
FYM93_RS11725	COG1376	ErfK ybiS ycfS ynhG family protein
FYM93_RS11760	COG1132	(ABC) transporter
FYM93_RS11765	COG1132	(ABC) transporter
FYM93_RS11770	COG1131	(ABC) transporter
FYM93_RS11780	COG4585	Histidine kinase
FYM93_RS11785	COG2197	response regulator
FYM93_RS11790	COG1132	(ABC) transporter
FYM93_RS11795	COG1132	(ABC) transporter
FYM93_RS11810	COG0058	SHG alpha-glucan phosphorylase activity
FYM93_RS11815	COG0366	Alpha amylase catalytic
FYM93_RS11825	COG3281	Trehalose synthase
FYM93_RS11830	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
FYM93_RS11840	COG3118	belongs to the thioredoxin family
FYM93_RS11855	COG0477	Major facilitator Superfamily
FYM93_RS11865	COG1301	dicarboxylic acid transport
FYM93_RS11870	COG3290	protein histidine kinase activity
FYM93_RS11875	COG4565	transcriptional regulatory protein
FYM93_RS11885	COG1175	transmembrane transport
FYM93_RS11890	COG0395	ABC-type sugar transport system, permease component
FYM93_RS11900	COG0205	6-phosphofructokinase activity
FYM93_RS11905	COG0857	belongs to the CobB CobQ family
FYM93_RS11905	COG0280	phosphate acetyltransferase
FYM93_RS11910	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FYM93_RS11945	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FYM93_RS11945	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FYM93_RS12010	COG0183	Belongs to the thiolase family
FYM93_RS12065	COG1637	Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
FYM93_RS12080	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYM93_RS12110	COG4585	Histidine kinase
FYM93_RS12115	COG2197	response regulator
FYM93_RS12135	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FYM93_RS12140	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
FYM93_RS12145	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
FYM93_RS12150	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
FYM93_RS12155	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FYM93_RS12160	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
FYM93_RS12165	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FYM93_RS12180	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FYM93_RS12185	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FYM93_RS12190	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FYM93_RS12200	COG2890	protein-(glutamine-N5) methyltransferase activity
FYM93_RS12205	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
FYM93_RS12210	COG0254	rRNA binding
FYM93_RS12225	COG0083	homoserine kinase activity
FYM93_RS12230	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
FYM93_RS12235	COG0460	homoserine dehydrogenase
FYM93_RS12240	COG0019	diaminopimelate decarboxylase activity
FYM93_RS12245	COG0018	arginyl-trna synthetase
FYM93_RS12275	COG0436	Aminotransferase
FYM93_RS12280	COG4566	intracellular signal transduction
FYM93_RS12285	COG1720	tRNA m6t6A37 methyltransferase activity
FYM93_RS12305	COG0626	cystathionine gamma-synthase activity
FYM93_RS12315	COG1720	tRNA m6t6A37 methyltransferase activity
FYM93_RS12345	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
FYM93_RS12350	COG3629	intracellular signal transduction
FYM93_RS12350	COG3903	Transcriptional regulator
FYM93_RS12360	COG1609	Transcriptional regulator
FYM93_RS12365	COG4209	transmembrane transport
FYM93_RS12370	COG0395	ABC-type sugar transport system, permease component
FYM93_RS12380	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FYM93_RS12390	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
FYM93_RS12395	COG1793	dna ligase
FYM93_RS12395	COG3285	dna ligase
FYM93_RS12415	COG2205	protein histidine kinase activity
FYM93_RS12425	COG0768	penicillin binding
FYM93_RS12460	COG1309	transcriptional regulator
FYM93_RS12515	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FYM93_RS12530	COG0745	RESPONSE REGULATOR receiver
FYM93_RS12535	COG2205	protein histidine kinase activity
FYM93_RS12560	COG0604	alcohol dehydrogenase
FYM93_RS12565	COG0281	malic enzyme
FYM93_RS12585	COG1126	abc transporter atp-binding protein
FYM93_RS12590	COG4106	trans-aconitate 2-methyltransferase activity
FYM93_RS12640	COG0142	geranyltranstransferase activity
FYM93_RS12645	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FYM93_RS12650	COG2515	1-aminocyclopropane-1-carboxylate deaminase
FYM93_RS12665	COG2172	sigma factor antagonist activity
FYM93_RS12680	COG1597	lipid kinase activity
FYM93_RS12695	COG0363	glucosamine-6-phosphate deaminase activity
FYM93_RS12700	COG2188	Transcriptional regulator
FYM93_RS12730	COG4977	sequence-specific DNA binding
FYM93_RS12735	COG2124	cytochrome p450
FYM93_RS12745	COG0242	peptide deformylase activity
FYM93_RS12755	COG5662	AntiSigma factor
FYM93_RS12760	COG1595	DNA-templated transcription, initiation
FYM93_RS12770	COG2135	peptidase activity
FYM93_RS12780	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
FYM93_RS12790	COG2076	Multidrug Resistance protein
FYM93_RS12805	COG0483	inositol monophosphate 1-phosphatase activity
FYM93_RS12815	COG0753	catalase activity
FYM93_RS12840	COG1615	UPF0182 protein
FYM93_RS12850	COG3480	Lon protease (S16) C-terminal proteolytic domain
FYM93_RS12900	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FYM93_RS12905	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FYM93_RS12950	COG0210	DNA helicase
FYM93_RS12980	COG1846	Transcriptional regulator
FYM93_RS13010	COG4172	Belongs to the ABC transporter superfamily
FYM93_RS13015	COG0601	transmembrane transport
FYM93_RS13020	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYM93_RS13075	COG1432	Conserved Protein
FYM93_RS13080	COG2095	MarC family integral membrane protein
FYM93_RS13095	COG2814	Major facilitator Superfamily
FYM93_RS13105	COG0598	Magnesium transport protein CorA
FYM93_RS13140	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FYM93_RS13145	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FYM93_RS13155	COG1595	DNA-templated transcription, initiation
FYM93_RS13170	COG1024	Enoyl-CoA hydratase
FYM93_RS13175	COG0519	Catalyzes the synthesis of GMP from XMP
FYM93_RS13185	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FYM93_RS13190	COG1611	Belongs to the LOG family
FYM93_RS13195	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FYM93_RS13230	COG2197	response regulator
FYM93_RS13235	COG4585	Histidine kinase
FYM93_RS13245	COG1131	(ABC) transporter
FYM93_RS13260	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FYM93_RS13275	COG4608	Belongs to the ABC transporter superfamily
FYM93_RS13280	COG0444	Belongs to the ABC transporter superfamily
FYM93_RS13285	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYM93_RS13290	COG0601	transmembrane transport
FYM93_RS13295	COG4166	transmembrane transport
FYM93_RS13300	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYM93_RS13305	COG0747	negative chemotaxis
FYM93_RS13315	COG0444	Belongs to the ABC transporter superfamily
FYM93_RS13320	COG4608	Belongs to the ABC transporter superfamily
FYM93_RS13325	COG0346	lactoylglutathione lyase activity
FYM93_RS13340	COG0444	Belongs to the ABC transporter superfamily
FYM93_RS13345	COG0601	transmembrane transport
FYM93_RS13350	COG0747	negative chemotaxis
FYM93_RS13360	COG1217	gtp-binding protein TYPA
FYM93_RS13380	COG1053	succinate dehydrogenase
FYM93_RS13465	COG0012	GTP binding
FYM93_RS13480	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
FYM93_RS13485	COG1570	exodeoxyribonuclease VII activity
FYM93_RS13490	COG1722	exodeoxyribonuclease VII activity
FYM93_RS13495	COG0778	Nitroreductase
FYM93_RS13520	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
FYM93_RS13520	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
FYM93_RS13525	COG0114	fumarate hydratase activity
FYM93_RS13540	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FYM93_RS13550	COG1136	(ABC) transporter
FYM93_RS13565	COG0450	alkyl hydroperoxide reductase
FYM93_RS13570	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYM93_RS13585	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
FYM93_RS13595	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FYM93_RS13600	COG2226	methyltransferase
FYM93_RS13610	COG2885	chlorophyll binding
FYM93_RS13630	COG2197	response regulator
FYM93_RS13665	COG2894	cell division
FYM93_RS13735	COG0251	oxidation-reduction process
FYM93_RS13740	COG1414	Transcriptional regulator
FYM93_RS13755	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
FYM93_RS13770	COG0436	Aminotransferase
FYM93_RS13795	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
FYM93_RS13810	COG1309	transcriptional regulator
FYM93_RS13825	COG1331	Highly conserved protein containing a thioredoxin domain
FYM93_RS13835	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FYM93_RS13845	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FYM93_RS13850	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FYM93_RS13855	COG2255	four-way junction helicase activity
FYM93_RS13880	COG0501	Belongs to the peptidase M48B family
FYM93_RS13895	COG1064	alcohol dehydrogenase
FYM93_RS13905	COG1136	(ABC) transporter
FYM93_RS13940	COG2986	histidine ammonia-lyase
FYM93_RS13950	COG1024	Enoyl-CoA hydratase
FYM93_RS13960	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
FYM93_RS13970	COG2267	carboxylic ester hydrolase activity
FYM93_RS13990	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FYM93_RS14000	COG0424	maF-like protein
FYM93_RS14010	COG4770	biotin carboxylase activity
FYM93_RS14035	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FYM93_RS14045	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
FYM93_RS14050	COG1012	belongs to the aldehyde dehydrogenase family
FYM93_RS14055	COG1012	belongs to the aldehyde dehydrogenase family
FYM93_RS14070	COG1595	DNA-templated transcription, initiation
FYM93_RS14075	COG0745	RESPONSE REGULATOR receiver
FYM93_RS14080	COG2205	protein histidine kinase activity
FYM93_RS14105	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FYM93_RS14115	COG0583	DNA-binding transcription factor activity
FYM93_RS14120	COG2814	Major facilitator Superfamily
FYM93_RS14155	COG1079	Belongs to the binding-protein-dependent transport system permease family
FYM93_RS14160	COG4603	Belongs to the binding-protein-dependent transport system permease family
FYM93_RS14165	COG3845	ABC transporter
FYM93_RS14170	COG1744	ABC transporter substrate-binding protein PnrA-like
FYM93_RS14175	COG1473	amidohydrolase
FYM93_RS14175	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
FYM93_RS14195	COG2089	acid synthase
FYM93_RS14210	COG1216	Glycosyl transferase, family 2
FYM93_RS14240	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FYM93_RS14240	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FYM93_RS14255	COG1595	DNA-templated transcription, initiation
FYM93_RS14285	COG3525	Glycosyl hydrolase, family 20, catalytic domain
FYM93_RS14295	COG2009	succinate dehydrogenase
FYM93_RS14305	COG1053	succinate dehydrogenase
FYM93_RS14325	COG1309	transcriptional regulator
FYM93_RS14350	COG1295	ribonuclease BN
FYM93_RS14365	COG0180	Tryptophanyl-tRNA synthetase
FYM93_RS14370	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FYM93_RS14375	COG0754	glutathionylspermidine amidase activity
FYM93_RS14395	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYM93_RS14400	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYM93_RS14415	COG4176	ABC-type proline glycine betaine transport system permease component
FYM93_RS14420	COG0517	IMP dehydrogenase activity
FYM93_RS14420	COG4175	Glycine betaine
FYM93_RS14430	COG1012	belongs to the aldehyde dehydrogenase family
FYM93_RS14440	COG0477	Major facilitator Superfamily
FYM93_RS14445	COG0039	L-malate dehydrogenase activity
FYM93_RS14460	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
FYM93_RS14475	COG2815	serine threonine protein kinase
FYM93_RS14475	COG0515	serine threonine protein kinase
FYM93_RS14485	COG0138	bifunctional purine biosynthesis protein purh
FYM93_RS14515	COG0045	succinate-CoA ligase (ADP-forming) activity
FYM93_RS14525	COG3552	Protein containing von Willebrand factor type A (VWA) domain
FYM93_RS14540	COG0714	Associated with various cellular activities
FYM93_RS14555	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FYM93_RS14555	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FYM93_RS14565	COG0739	heme binding
FYM93_RS14590	COG2197	response regulator
FYM93_RS14635	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FYM93_RS14635	COG0519	Catalyzes the synthesis of GMP from XMP
FYM93_RS14650	COG1012	belongs to the aldehyde dehydrogenase family
FYM93_RS14655	COG0515	serine threonine protein kinase
FYM93_RS14660	COG0515	serine threonine protein kinase
FYM93_RS14665	COG0515	serine threonine protein kinase
FYM93_RS14665	COG2815	serine threonine protein kinase
FYM93_RS14670	COG0515	serine threonine protein kinase
FYM93_RS14675	COG2815	serine threonine protein kinase
FYM93_RS14675	COG0515	serine threonine protein kinase
FYM93_RS14685	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FYM93_RS14700	COG0516	GMP reductase activity
FYM93_RS14710	COG1595	DNA-templated transcription, initiation
FYM93_RS14725	COG0583	DNA-binding transcription factor activity
FYM93_RS14735	COG4221	oxidoreductase activity
FYM93_RS14745	COG0459	protein refolding
FYM93_RS14755	COG0726	polysaccharide deacetylase
FYM93_RS14760	COG0726	polysaccharide deacetylase
FYM93_RS14780	COG1653	transport
FYM93_RS14785	COG1175	transmembrane transport
FYM93_RS14805	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
FYM93_RS14825	COG0802	atpase or kinase
FYM93_RS14835	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FYM93_RS14845	COG0736	holo-[acyl-carrier-protein] synthase activity
FYM93_RS14850	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS14855	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FYM93_RS14865	COG1072	(Pantothenic acid kinase))
FYM93_RS14870	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FYM93_RS14875	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
FYM93_RS14880	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
FYM93_RS14890	COG0101	tRNA pseudouridine synthase activity
FYM93_RS14895	COG0203	ribosomal protein L17
FYM93_RS14900	COG0202	RNA polymerase activity
FYM93_RS14905	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FYM93_RS14910	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FYM93_RS14915	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FYM93_RS14920	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FYM93_RS14930	COG0563	adenylate kinase activity
FYM93_RS14940	COG0200	Binds to the 23S rRNA
FYM93_RS14945	COG1841	ribosomal large subunit assembly
FYM93_RS14950	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
FYM93_RS14955	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
FYM93_RS14960	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
FYM93_RS14965	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
FYM93_RS14975	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
FYM93_RS14980	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
FYM93_RS14985	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
FYM93_RS14990	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
FYM93_RS14995	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
FYM93_RS15000	COG0255	Belongs to the universal ribosomal protein uL29 family
FYM93_RS15005	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
FYM93_RS15010	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
FYM93_RS15015	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
FYM93_RS15020	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
FYM93_RS15025	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
FYM93_RS15030	COG0089	rRNA binding
FYM93_RS15035	COG0088	Forms part of the polypeptide exit tunnel
FYM93_RS15040	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
FYM93_RS15045	COG0051	transcription antitermination factor activity, RNA binding
FYM93_RS15055	COG1511	domain protein
FYM93_RS15110	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FYM93_RS15115	COG0049	tRNA binding
FYM93_RS15120	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
FYM93_RS15155	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FYM93_RS15160	COG0085	RNA polymerase activity
FYM93_RS15170	COG0222	ribosome binding
FYM93_RS15175	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
FYM93_RS15185	COG0081	regulation of translation
FYM93_RS15190	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
FYM93_RS15195	COG0250	Participates in transcription elongation, termination and antitermination
FYM93_RS15210	COG0436	Aminotransferase
FYM93_RS15215	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FYM93_RS15220	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FYM93_RS15250	COG0477	Major facilitator Superfamily
FYM93_RS15265	COG2030	dehydratase
FYM93_RS15270	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FYM93_RS15290	COG0702	epimerase
FYM93_RS15310	COG1595	DNA-templated transcription, initiation
FYM93_RS15325	COG1666	GTP binding
FYM93_RS15330	COG2261	transglycosylase associated protein
FYM93_RS15345	COG0501	Belongs to the peptidase M48B family
FYM93_RS15350	COG1007	ATP synthesis coupled electron transport
FYM93_RS15355	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYM93_RS15365	COG0713	ATP synthesis coupled electron transport
FYM93_RS15370	COG0839	Belongs to the complex I subunit 6 family
FYM93_RS15375	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYM93_RS15380	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
FYM93_RS15385	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYM93_RS15390	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYM93_RS15395	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYM93_RS15410	COG2197	response regulator
FYM93_RS15415	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
FYM93_RS15415	COG0674	pyruvate-flavodoxin oxidoreductase activity
FYM93_RS15420	COG1013	pyruvate-flavodoxin oxidoreductase activity
FYM93_RS15425	COG0702	epimerase
FYM93_RS15460	COG0142	geranyltranstransferase activity
FYM93_RS15465	COG3953	SLT domain
FYM93_RS15465	COG5412	phage tail tape measure protein
FYM93_RS15470	COG0561	phosphatase activity
FYM93_RS15475	COG0492	ferredoxin-NADP+ reductase activity
FYM93_RS15505	COG1007	ATP synthesis coupled electron transport
FYM93_RS15515	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FYM93_RS15520	COG0713	ATP synthesis coupled electron transport
FYM93_RS15525	COG0839	Belongs to the complex I subunit 6 family
FYM93_RS15530	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYM93_RS15535	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
FYM93_RS15540	COG1034	ATP synthesis coupled electron transport
FYM93_RS15545	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
FYM93_RS15555	COG0649	NAD binding
FYM93_RS15560	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYM93_RS15565	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYM93_RS15580	COG0242	peptide deformylase activity
FYM93_RS15600	COG2226	methyltransferase
FYM93_RS15610	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
FYM93_RS15630	COG1427	Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
FYM93_RS15635	COG1278	Cold shock
FYM93_RS15640	COG2226	methyltransferase
FYM93_RS15655	COG3629	intracellular signal transduction
FYM93_RS15705	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
FYM93_RS15715	COG1309	transcriptional regulator
FYM93_RS15730	COG1573	uracil-dna glycosylase
FYM93_RS15735	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
FYM93_RS15745	COG0163	prenyltransferase activity
FYM93_RS15755	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FYM93_RS15805	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FYM93_RS15810	COG1333	cytochrome c biogenesis protein
FYM93_RS15815	COG0785	Cytochrome C biogenesis protein
FYM93_RS15830	COG0406	alpha-ribazole phosphatase activity
FYM93_RS15835	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
FYM93_RS15865	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FYM93_RS15890	COG1191	sigma factor activity
FYM93_RS15905	COG0515	serine threonine protein kinase
FYM93_RS15905	COG2815	serine threonine protein kinase
FYM93_RS15940	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
FYM93_RS15940	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FYM93_RS15945	COG2205	protein histidine kinase activity
FYM93_RS15950	COG0745	RESPONSE REGULATOR receiver
FYM93_RS15960	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FYM93_RS15965	COG1742	UPF0060 membrane protein
FYM93_RS15990	COG1690	Belongs to the RtcB family
FYM93_RS16025	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
FYM93_RS16030	COG0018	arginyl-trna synthetase
FYM93_RS16070	COG2910	NAD(P)H-binding
FYM93_RS16075	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FYM93_RS16080	COG0113	porphobilinogen synthase activity
FYM93_RS16125	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FYM93_RS16125	COG1648	precorrin-2 dehydrogenase activity
FYM93_RS16130	COG0181	hydroxymethylbilane synthase activity
FYM93_RS16135	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
FYM93_RS16140	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
FYM93_RS16190	COG0123	including yeast histone deacetylase and acetoin utilization protein
FYM93_RS16195	COG0738	Major facilitator superfamily
FYM93_RS16235	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FYM93_RS16250	COG0842	Transport permease protein
FYM93_RS16250	COG1129	ABC transporter
FYM93_RS16265	COG4991	sh3 domain protein
FYM93_RS16270	COG0515	serine threonine protein kinase
FYM93_RS16270	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYM93_RS16275	COG0129	dihydroxy-acid dehydratase activity
FYM93_RS16285	COG1082	Xylose isomerase domain protein TIM barrel
FYM93_RS16290	COG0248	Ppx GppA phosphatase
FYM93_RS16315	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
FYM93_RS16325	COG1194	a g-specific adenine glycosylase
FYM93_RS16330	COG1595	DNA-templated transcription, initiation
FYM93_RS16340	COG0745	RESPONSE REGULATOR receiver
FYM93_RS16345	COG2205	protein histidine kinase activity
FYM93_RS16355	COG2814	Major facilitator Superfamily
FYM93_RS16360	COG0789	Transcriptional regulator
FYM93_RS16375	COG0739	heme binding
FYM93_RS16410	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FYM93_RS16430	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
FYM93_RS16440	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FYM93_RS16445	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
FYM93_RS16460	COG2197	response regulator
FYM93_RS16475	COG0649	NAD binding
FYM93_RS16505	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FYM93_RS16520	COG0302	gtp cyclohydrolase
FYM93_RS16535	COG0037	tRNA processing
FYM93_RS16545	COG2027	D-alanyl-D-alanine carboxypeptidase
FYM93_RS16550	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FYM93_RS16560	COG0586	Pfam SNARE associated Golgi protein
FYM93_RS16565	COG0393	Putative heavy-metal-binding
FYM93_RS16570	COG0789	Transcriptional regulator
FYM93_RS16575	COG0076	glutamate decarboxylase activity
FYM93_RS16580	COG2318	DinB family
FYM93_RS16585	COG1012	belongs to the aldehyde dehydrogenase family
FYM93_RS16630	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FYM93_RS16630	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FYM93_RS16635	COG3629	intracellular signal transduction
FYM93_RS16635	COG3903	Transcriptional regulator
FYM93_RS16675	COG0367	asparagine synthase
FYM93_RS16695	COG2124	cytochrome p450
FYM93_RS16700	COG0583	DNA-binding transcription factor activity
FYM93_RS16705	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FYM93_RS16715	COG1013	pyruvate-flavodoxin oxidoreductase activity
FYM93_RS16720	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
FYM93_RS16720	COG0674	pyruvate-flavodoxin oxidoreductase activity
FYM93_RS16745	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
FYM93_RS16750	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FYM93_RS16750	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FYM93_RS16760	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYM93_RS16805	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FYM93_RS16810	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FYM93_RS16810	COG1754	DNA topoisomerase type I activity
FYM93_RS16830	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
FYM93_RS16835	COG2172	sigma factor antagonist activity
FYM93_RS16840	COG1366	Belongs to the anti-sigma-factor antagonist family
FYM93_RS16905	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FYM93_RS16920	COG2267	carboxylic ester hydrolase activity
FYM93_RS16955	COG2801	Transposase and inactivated derivatives
FYM93_RS16955	COG3415	Transposase
FYM93_RS16960	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FYM93_RS16985	COG0003	Pfam Anion-transporting ATPase
FYM93_RS17010	COG1408	metallophosphoesterase
FYM93_RS17030	COG1309	transcriptional regulator
FYM93_RS17035	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYM93_RS17055	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
FYM93_RS17055	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FYM93_RS17070	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FYM93_RS17085	COG1937	Protein conserved in bacteria
FYM93_RS17115	COG1595	DNA-templated transcription, initiation
FYM93_RS17135	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
FYM93_RS17140	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
FYM93_RS17155	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FYM93_RS17160	COG1802	Transcriptional regulator
FYM93_RS17170	COG0737	Belongs to the 5'-nucleotidase family
FYM93_RS17175	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
FYM93_RS17195	COG1131	(ABC) transporter
FYM93_RS17200	COG3559	Exporter of polyketide antibiotics
FYM93_RS17210	COG2197	response regulator
FYM93_RS17215	COG4585	Histidine kinase
FYM93_RS17220	COG2197	response regulator
FYM93_RS17225	COG4585	Histidine kinase
FYM93_RS17245	COG3844	kynureninase activity
FYM93_RS17250	COG3483	tryptophan 2,3-dioxygenase activity
FYM93_RS17260	COG0477	Major facilitator Superfamily
FYM93_RS17270	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
FYM93_RS17285	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
FYM93_RS17310	COG0542	response to heat
FYM93_RS17340	COG4213	ABC transporter substrate-binding protein
FYM93_RS17345	COG0789	Transcriptional regulator
FYM93_RS17350	COG0484	heat shock protein binding
FYM93_RS17355	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FYM93_RS17360	COG0443	Heat shock 70 kDa protein
FYM93_RS17365	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FYM93_RS17370	COG2181	nitrate reductase activity
FYM93_RS17370	COG0247	lactate metabolic process
FYM93_RS17385	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
FYM93_RS17390	COG0717	Belongs to the dCTP deaminase family
FYM93_RS17415	COG3693	PFAM glycoside hydrolase, family 10
FYM93_RS17425	COG1595	DNA-templated transcription, initiation
FYM93_RS17465	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYM93_RS17475	COG0385	Bile acid
FYM93_RS17515	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FYM93_RS17525	COG1278	Cold shock
FYM93_RS17570	COG3629	intracellular signal transduction
FYM93_RS17570	COG3903	Transcriptional regulator
FYM93_RS17590	COG1595	DNA-templated transcription, initiation
FYM93_RS17605	COG2188	Transcriptional regulator
FYM93_RS17630	COG0701	Predicted permease
FYM93_RS17640	COG2255	four-way junction helicase activity
FYM93_RS17680	COG0366	Alpha amylase catalytic
FYM93_RS17685	COG1957	nucleoside hydrolase
FYM93_RS17740	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FYM93_RS17750	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FYM93_RS17760	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
FYM93_RS17775	COG1741	Belongs to the pirin family
FYM93_RS17785	COG1960	acyl-CoA dehydrogenase activity
FYM93_RS17790	COG1362	aminopeptidase activity
FYM93_RS17825	COG2271	Major facilitator Superfamily
FYM93_RS17860	COG0508	dehydrogenase complex catalyzes the overall conversion of
FYM93_RS17865	COG0022	dehydrogenase e1 component
FYM93_RS17880	COG0515	serine threonine protein kinase
FYM93_RS17885	COG0515	serine threonine protein kinase
FYM93_RS17900	COG0604	alcohol dehydrogenase
FYM93_RS17900	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS17900	COG3321	synthase
FYM93_RS17905	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FYM93_RS17910	COG0303	'Molybdopterin
FYM93_RS17915	COG0746	molybdenum cofactor guanylyltransferase activity
FYM93_RS17935	COG1522	sequence-specific DNA binding
FYM93_RS17945	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYM93_RS17970	COG3396	Phenylacetate-CoA oxygenase
FYM93_RS17975	COG3460	Phenylacetate-CoA oxygenase
FYM93_RS17980	COG3396	Phenylacetate-CoA oxygenase
FYM93_RS17985	COG2151	metal-sulfur cluster biosynthetic enzyme
FYM93_RS17990	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FYM93_RS18020	COG0477	Major facilitator Superfamily
FYM93_RS18060	COG1716	ATPase activity
FYM93_RS18065	COG1716	ATPase activity
FYM93_RS18070	COG3266	domain, Protein
FYM93_RS18070	COG0631	protein serine/threonine phosphatase activity
FYM93_RS18080	COG0768	penicillin binding
FYM93_RS18090	COG0515	serine threonine protein kinase
FYM93_RS18095	COG3764	Sortase (surface protein transpeptidase)
FYM93_RS18100	COG3764	Sortase (surface protein transpeptidase)
FYM93_RS18115	COG3764	Sortase (surface protein transpeptidase)
FYM93_RS18130	COG0705	Rhomboid family
FYM93_RS18160	COG0515	serine threonine protein kinase
FYM93_RS18195	COG4249	Peptidase C14 caspase catalytic subunit p20
FYM93_RS18195	COG2319	Wd-40 repeat
FYM93_RS18220	COG3266	domain, Protein
FYM93_RS18225	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FYM93_RS18230	COG0187	DNA topoisomerase II activity
FYM93_RS18235	COG5512	Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives
FYM93_RS18240	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
FYM93_RS18245	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
FYM93_RS18250	COG0592	DNA-directed DNA polymerase activity
FYM93_RS18260	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
FYM93_RS18265	COG0230	Belongs to the bacterial ribosomal protein bL34 family
FYM93_RS18270	COG0594	ribonuclease P activity
FYM93_RS18275	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
FYM93_RS18280	COG0706	membrane insertase activity
FYM93_RS18290	COG0357	Ribosomal RNA small subunit methyltransferase G
FYM93_RS18295	COG1192	Involved in chromosome partitioning
FYM93_RS18310	COG3118	belongs to the thioredoxin family
FYM93_RS18315	COG0492	ferredoxin-NADP+ reductase activity
FYM93_RS18325	COG1595	DNA-templated transcription, initiation
FYM93_RS18330	COG0515	serine threonine protein kinase
FYM93_RS18330	COG2815	serine threonine protein kinase
FYM93_RS18345	COG0617	tRNA 3'-terminal CCA addition
FYM93_RS18355	COG1260	myo-inositol-1-phosphate synthase
FYM93_RS18365	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FYM93_RS18390	COG0360	Binds together with S18 to 16S ribosomal RNA
FYM93_RS18395	COG0629	single-stranded DNA binding
FYM93_RS18400	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
FYM93_RS18405	COG0359	binds to the 23S rRNA
FYM93_RS18415	COG0305	Participates in initiation and elongation during chromosome replication
FYM93_RS18450	COG2814	Major facilitator Superfamily
FYM93_RS18475	COG0626	cystathionine gamma-synthase activity
FYM93_RS18480	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FYM93_RS18485	COG1950	PFAM Membrane protein of
FYM93_RS18490	COG0662	Cupin 2, conserved barrel domain protein
FYM93_RS18500	COG1414	Transcriptional regulator
FYM93_RS18515	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
FYM93_RS18530	COG1609	Transcriptional regulator
FYM93_RS18535	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FYM93_RS18540	COG1271	oxidase subunit
FYM93_RS18545	COG1294	oxidase, subunit
FYM93_RS18550	COG4988	ABC transporter
FYM93_RS18555	COG0561	phosphatase activity
FYM93_RS18565	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
FYM93_RS18580	COG1131	(ABC) transporter
FYM93_RS18605	COG0561	phosphatase activity
FYM93_RS18610	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FYM93_RS18620	COG2837	iron assimilation
FYM93_RS18635	COG1999	signal sequence binding
FYM93_RS18660	COG0006	proline dipeptidase activity
FYM93_RS18680	COG0653	protein targeting
FYM93_RS18695	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FYM93_RS18745	COG1595	DNA-templated transcription, initiation
FYM93_RS18750	COG0318	PFAM AMP-dependent synthetase and ligase
FYM93_RS18785	COG1672	PFAM Archaeal ATPase
FYM93_RS18785	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
FYM93_RS18815	COG0745	RESPONSE REGULATOR receiver
FYM93_RS18820	COG2205	protein histidine kinase activity
FYM93_RS18825	COG0463	Glycosyl transferase, family 2
FYM93_RS18830	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
FYM93_RS18840	COG3467	pyridoxamine 5'-phosphate
FYM93_RS18875	COG1191	sigma factor activity
FYM93_RS18880	COG1191	sigma factor activity
FYM93_RS18915	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
FYM93_RS18930	COG0433	COG0433 Predicted ATPase
FYM93_RS18960	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS18980	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FYM93_RS19115	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FYM93_RS19195	COG0151	Belongs to the GarS family
FYM93_RS19210	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
FYM93_RS19220	COG2197	response regulator
FYM93_RS19255	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FYM93_RS19260	COG0047	phosphoribosylformylglycinamidine synthase activity
FYM93_RS19265	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FYM93_RS19290	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
FYM93_RS19320	COG1643	Atp-dependent helicase
FYM93_RS19365	COG0513	Belongs to the DEAD box helicase family
FYM93_RS19395	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
FYM93_RS19400	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FYM93_RS19400	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FYM93_RS19425	COG0220	tRNA (guanine-N7-)-methyltransferase activity
FYM93_RS19430	COG0579	oxidoreductase
FYM93_RS19460	COG1252	NADH dehydrogenase
FYM93_RS19560	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS19565	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS19575	COG0791	NLP P60 protein
FYM93_RS19580	COG0671	phosphoesterase, PA-phosphatase related
FYM93_RS19585	COG0277	FAD linked oxidase domain protein
FYM93_RS19605	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FYM93_RS19640	COG0306	phosphate transporter
FYM93_RS19650	COG1937	Protein conserved in bacteria
FYM93_RS19660	COG0406	alpha-ribazole phosphatase activity
FYM93_RS19660	COG0494	nUDIX hydrolase
FYM93_RS19670	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FYM93_RS19680	COG1131	(ABC) transporter
FYM93_RS19685	COG1725	Transcriptional regulator
FYM93_RS19690	COG0456	acetyltransferase
FYM93_RS19695	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FYM93_RS19705	COG0745	RESPONSE REGULATOR receiver
FYM93_RS19715	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FYM93_RS19720	COG1609	Transcriptional regulator
FYM93_RS19725	COG0745	RESPONSE REGULATOR receiver
FYM93_RS19790	COG2897	thiosulfate sulfurtransferase activity
FYM93_RS19810	COG3485	protocatechuate 3,4-dioxygenase
FYM93_RS19820	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FYM93_RS19825	COG1490	D-aminoacyl-tRNA deacylase activity
FYM93_RS19835	COG4552	Acetyltransferase involved in intracellular survival and related
FYM93_RS19840	COG2188	Transcriptional regulator
FYM93_RS19850	COG1802	Transcriptional regulator
FYM93_RS19855	COG0546	phosphoglycolate phosphatase activity
FYM93_RS19865	COG1309	transcriptional regulator
FYM93_RS19875	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FYM93_RS19885	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FYM93_RS19910	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
FYM93_RS19930	COG2204	response regulator
FYM93_RS19935	COG3883	PFAM NLP P60 protein
FYM93_RS19935	COG0791	NLP P60 protein
FYM93_RS19945	COG0438	transferase activity, transferring glycosyl groups
FYM93_RS19975	COG0588	phosphoglycerate mutase activity
FYM93_RS19990	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FYM93_RS19995	COG0798	PFAM Bile acid sodium symporter
FYM93_RS20000	COG0640	Transcriptional regulator
FYM93_RS20015	COG5002	protein histidine kinase activity
FYM93_RS20035	COG1329	Transcriptional regulator
FYM93_RS20040	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
FYM93_RS20045	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
FYM93_RS20075	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FYM93_RS20080	COG0215	cysteine-tRNA ligase activity
FYM93_RS20085	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FYM93_RS20095	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FYM93_RS20105	COG3842	ATPase activity
FYM93_RS20115	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYM93_RS20120	COG2329	Antibiotic biosynthesis monooxygenase
FYM93_RS20125	COG0662	Cupin 2, conserved barrel domain protein
FYM93_RS20135	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FYM93_RS20140	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FYM93_RS20145	COG2867	negative regulation of translational initiation
FYM93_RS20220	COG3300	MHYT domain
FYM93_RS20220	COG5001	Diguanylate cyclase
FYM93_RS20250	COG1653	transport
FYM93_RS20265	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
FYM93_RS20270	COG0463	Glycosyl transferase, family 2
FYM93_RS20275	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
FYM93_RS20285	COG1278	Cold shock
FYM93_RS20290	COG0459	protein refolding
FYM93_RS20305	COG4106	trans-aconitate 2-methyltransferase activity
FYM93_RS20310	COG1263	PTS System
FYM93_RS20310	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYM93_RS20315	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
FYM93_RS20320	COG1737	Transcriptional regulator
FYM93_RS20370	COG2268	Band 7 protein
FYM93_RS20380	COG3973	AAA domain
FYM93_RS20395	COG1061	Type III restriction enzyme res subunit
FYM93_RS20420	COG1278	Cold shock
FYM93_RS20425	COG2107	Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
FYM93_RS20430	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FYM93_RS20440	COG2814	Major facilitator Superfamily
FYM93_RS20465	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FYM93_RS20475	COG2252	PERMEase
FYM93_RS20505	COG0667	Aldo Keto reductase
FYM93_RS20550	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
FYM93_RS20555	COG0277	FAD linked oxidase domain protein
FYM93_RS20555	COG0247	lactate metabolic process
FYM93_RS20590	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FYM93_RS20605	COG0318	PFAM AMP-dependent synthetase and ligase
FYM93_RS20630	COG0259	pyridoxamine-phosphate oxidase activity
FYM93_RS20650	COG4821	SIS domain
FYM93_RS20670	COG1595	DNA-templated transcription, initiation
FYM93_RS20760	COG0318	PFAM AMP-dependent synthetase and ligase
FYM93_RS20770	COG1960	acyl-CoA dehydrogenase activity
FYM93_RS20775	COG1960	acyl-CoA dehydrogenase activity
FYM93_RS20795	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS20800	COG1960	acyl-CoA dehydrogenase activity
FYM93_RS20830	COG1024	Enoyl-CoA hydratase
FYM93_RS20840	COG2072	flavoprotein involved in K transport
FYM93_RS20855	COG0259	pyridoxamine-phosphate oxidase activity
FYM93_RS20870	COG1960	acyl-CoA dehydrogenase activity
FYM93_RS20880	COG1280	lysine exporter protein (LysE YggA)
FYM93_RS20885	COG1522	sequence-specific DNA binding
FYM93_RS20890	COG1309	transcriptional regulator
FYM93_RS20935	COG3629	intracellular signal transduction
FYM93_RS20935	COG3903	Transcriptional regulator
FYM93_RS20965	COG1012	belongs to the aldehyde dehydrogenase family
FYM93_RS20980	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
FYM93_RS21025	COG1686	Belongs to the peptidase S11 family
FYM93_RS21050	COG0386	Belongs to the glutathione peroxidase family
FYM93_RS21055	COG0640	Transcriptional regulator
FYM93_RS21075	COG1523	belongs to the glycosyl hydrolase 13 family
FYM93_RS21110	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FYM93_RS21190	COG0598	Magnesium transport protein CorA
FYM93_RS21240	COG4974	Belongs to the 'phage' integrase family
FYM93_RS21280	COG1846	Transcriptional regulator
FYM93_RS21285	COG3384	dioxygenase
FYM93_RS21290	COG1247	-acetyltransferase
FYM93_RS21325	COG1376	ErfK ybiS ycfS ynhG family protein
FYM93_RS21350	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
FYM93_RS21360	COG0477	Major facilitator Superfamily
FYM93_RS21375	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FYM93_RS21380	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FYM93_RS21390	COG0315	cyclic pyranopterin monophosphate synthase activity
FYM93_RS21395	COG0521	Mo-molybdopterin cofactor biosynthetic process
FYM93_RS21395	COG0315	cyclic pyranopterin monophosphate synthase activity
FYM93_RS21400	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FYM93_RS21415	COG0454	-acetyltransferase
FYM93_RS21420	COG0708	Exodeoxyribonuclease III
FYM93_RS21425	COG0789	Transcriptional regulator
FYM93_RS21430	COG2072	flavoprotein involved in K transport
FYM93_RS21435	COG2267	carboxylic ester hydrolase activity
FYM93_RS21440	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS21450	COG0793	Belongs to the peptidase S41A family
FYM93_RS21450	COG4946	Tricorn protease homolog
FYM93_RS21460	COG2409	Drug exporters of the RND superfamily
FYM93_RS21480	COG0442	prolyl-tRNA aminoacylation
FYM93_RS21510	COG1122	ATPase activity
FYM93_RS21520	COG0310	cobalt ion transport
FYM93_RS21555	COG0084	hydrolase, TatD family'
FYM93_RS21565	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FYM93_RS21570	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
FYM93_RS21580	COG0488	(ABC) transporter
FYM93_RS21620	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
FYM93_RS21630	COG2197	response regulator
FYM93_RS21640	COG4106	trans-aconitate 2-methyltransferase activity
FYM93_RS21660	COG1309	transcriptional regulator
FYM93_RS21670	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
FYM93_RS21680	COG0193	aminoacyl-tRNA hydrolase activity
FYM93_RS21685	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
FYM93_RS21690	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FYM93_RS21695	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FYM93_RS21710	COG4585	Histidine kinase
FYM93_RS21740	COG1136	(ABC) transporter
FYM93_RS21745	COG0577	efflux transmembrane transporter activity
FYM93_RS21805	COG2124	cytochrome p450
FYM93_RS21815	COG1652	LysM domain
FYM93_RS21825	COG0148	phosphopyruvate hydratase activity
FYM93_RS21845	COG1252	NADH dehydrogenase
FYM93_RS21850	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FYM93_RS21855	COG0577	efflux transmembrane transporter activity
FYM93_RS21860	COG0577	efflux transmembrane transporter activity
FYM93_RS21860	COG1136	(ABC) transporter
FYM93_RS21890	COG0183	Belongs to the thiolase family
FYM93_RS21895	COG2755	lipolytic protein G-D-S-L family
FYM93_RS21945	COG0789	Transcriptional regulator
FYM93_RS21990	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
FYM93_RS21995	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FYM93_RS22005	COG1228	amidohydrolase
FYM93_RS22010	COG1191	sigma factor activity
FYM93_RS22015	COG1366	Belongs to the anti-sigma-factor antagonist family
FYM93_RS22045	COG3104	oligopeptide transport
FYM93_RS22050	COG0745	RESPONSE REGULATOR receiver
FYM93_RS22055	COG2205	protein histidine kinase activity
FYM93_RS22070	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FYM93_RS22095	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
FYM93_RS22115	COG1316	TRANSCRIPTIONal
FYM93_RS22125	COG1316	TRANSCRIPTIONal
FYM93_RS22135	COG1316	TRANSCRIPTIONal
FYM93_RS22140	COG1316	TRANSCRIPTIONal
FYM93_RS22145	COG1316	TRANSCRIPTIONal
FYM93_RS22165	COG0778	Nitroreductase
FYM93_RS22165	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
FYM93_RS22170	COG0391	Required for morphogenesis under gluconeogenic growth conditions
FYM93_RS22220	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FYM93_RS22225	COG2835	tetraacyldisaccharide 4'-kinase activity
FYM93_RS22235	COG1482	cell wall glycoprotein biosynthetic process
FYM93_RS22245	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
FYM93_RS22290	COG0714	Associated with various cellular activities
FYM93_RS22310	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
FYM93_RS22315	COG0745	RESPONSE REGULATOR receiver
FYM93_RS22320	COG5000	phosphorelay sensor kinase activity
FYM93_RS22320	COG5002	protein histidine kinase activity
FYM93_RS22325	COG0823	Involved in the tonB-independent uptake of proteins
FYM93_RS22335	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FYM93_RS22340	COG2197	response regulator
FYM93_RS22345	COG3214	Protein conserved in bacteria
FYM93_RS22355	COG0653	protein targeting
FYM93_RS22380	COG2902	Dehydrogenase
FYM93_RS22390	COG1215	transferase activity, transferring glycosyl groups
FYM93_RS22395	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
FYM93_RS22400	COG1134	teichoic acid transport
FYM93_RS22410	COG1309	transcriptional regulator
FYM93_RS22425	COG1215	transferase activity, transferring glycosyl groups
FYM93_RS22440	COG1846	Transcriptional regulator
FYM93_RS22445	COG1764	response to oxidative stress
FYM93_RS22450	COG0463	Glycosyl transferase, family 2
FYM93_RS22450	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
FYM93_RS22455	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
FYM93_RS22460	COG1216	Glycosyl transferase, family 2
FYM93_RS22485	COG0395	ABC-type sugar transport system, permease component
FYM93_RS22490	COG1175	transmembrane transport
FYM93_RS22495	COG1653	transport
FYM93_RS22500	COG1674	ftsk spoiiie
FYM93_RS22505	COG0515	serine threonine protein kinase
FYM93_RS22510	COG0515	serine threonine protein kinase
FYM93_RS22515	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
FYM93_RS22530	COG2884	Cell division ATP-binding protein ftsE
FYM93_RS22535	COG2177	Part of the ABC transporter FtsEX involved in
FYM93_RS22540	COG0793	Belongs to the peptidase S41A family
FYM93_RS22545	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
FYM93_RS22560	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FYM93_RS22565	COG0277	FAD linked oxidase domain protein
FYM93_RS22575	COG3973	AAA domain
FYM93_RS22585	COG0776	regulation of translation
FYM93_RS22590	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FYM93_RS22595	COG1678	Uncharacterized ACR, COG1678
FYM93_RS22605	COG3525	Glycosyl hydrolase, family 20, catalytic domain
FYM93_RS22645	COG1181	Belongs to the D-alanine--D-alanine ligase family
FYM93_RS22705	COG3185	4-Hydroxyphenylpyruvate dioxygenase
FYM93_RS22715	COG0277	FAD linked oxidase domain protein
FYM93_RS22755	COG1335	isochorismatase
FYM93_RS22765	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FYM93_RS22780	COG1113	amino acid transport
FYM93_RS22820	COG1263	PTS System
FYM93_RS22825	COG1263	PTS System
FYM93_RS22830	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYM93_RS22835	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
FYM93_RS22850	COG1131	(ABC) transporter
FYM93_RS22865	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FYM93_RS22905	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FYM93_RS22915	COG2733	membrane
FYM93_RS22930	COG0071	Belongs to the small heat shock protein (HSP20) family
FYM93_RS22940	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FYM93_RS23020	COG3764	Sortase (surface protein transpeptidase)
FYM93_RS23040	COG0706	membrane insertase activity
FYM93_RS23055	COG4702	Belongs to the UPF0303 family
FYM93_RS23060	COG0673	inositol 2-dehydrogenase activity
FYM93_RS23080	COG2188	Transcriptional regulator
FYM93_RS23090	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FYM93_RS23130	COG2186	Transcriptional regulator
FYM93_RS23150	COG3397	chitin binding
FYM93_RS23165	COG1126	abc transporter atp-binding protein
FYM93_RS23170	COG0765	amino acid transport
FYM93_RS23175	COG0765	amino acid transport
FYM93_RS23180	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYM93_RS23185	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FYM93_RS23200	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FYM93_RS23250	COG0406	alpha-ribazole phosphatase activity
FYM93_RS23275	COG0745	RESPONSE REGULATOR receiver
FYM93_RS23285	COG3979	chitinase
FYM93_RS23315	COG0589	response to stress
FYM93_RS23325	COG4977	sequence-specific DNA binding
FYM93_RS23330	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
FYM93_RS23340	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FYM93_RS23365	COG3486	L-lysine 6-monooxygenase (NADPH) activity
FYM93_RS23370	COG0076	glutamate decarboxylase activity
FYM93_RS23375	COG2375	cellular response to nickel ion
FYM93_RS23375	COG1132	(ABC) transporter
FYM93_RS23385	COG1960	acyl-CoA dehydrogenase activity
FYM93_RS23400	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FYM93_RS23405	COG1309	transcriptional regulator
FYM93_RS23415	COG1946	Acyl-CoA thioesterase
FYM93_RS23440	COG0028	Belongs to the TPP enzyme family
FYM93_RS23475	COG1472	Belongs to the glycosyl hydrolase 3 family
FYM93_RS23490	COG1609	Transcriptional regulator
FYM93_RS23495	COG0673	inositol 2-dehydrogenase activity
FYM93_RS23510	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS23550	COG4941	Belongs to the sigma-70 factor family
FYM93_RS23560	COG1869	D-ribose catabolic process
FYM93_RS23565	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYM93_RS23575	COG1129	ABC transporter
FYM93_RS23585	COG0604	alcohol dehydrogenase
FYM93_RS23590	COG1902	pentaerythritol trinitrate reductase activity
FYM93_RS23595	COG1846	Transcriptional regulator
FYM93_RS23610	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FYM93_RS23635	COG1063	alcohol dehydrogenase
FYM93_RS23645	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYM93_RS23655	COG3718	enzyme involved in inositol metabolism
FYM93_RS23660	COG3962	Belongs to the TPP enzyme family
FYM93_RS23675	COG1131	(ABC) transporter
FYM93_RS23740	COG2304	oxidoreductase activity
FYM93_RS23750	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FYM93_RS23775	COG0629	single-stranded DNA binding
FYM93_RS23845	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYM93_RS23865	COG1486	melibiose metabolic process
FYM93_RS23870	COG0395	ABC-type sugar transport system, permease component
FYM93_RS23875	COG1175	transmembrane transport
FYM93_RS23895	COG0668	transmembrane transport
FYM93_RS23930	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYM93_RS23955	COG1595	DNA-templated transcription, initiation
FYM93_RS24010	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
FYM93_RS24020	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FYM93_RS24030	COG1113	amino acid transport
FYM93_RS24045	COG1116	anion transmembrane transporter activity
FYM93_RS24050	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYM93_RS24060	COG1940	carbohydrate kinase activity
FYM93_RS24070	COG1113	amino acid transport
FYM93_RS24075	COG0698	ribose 5-phosphate isomerase
FYM93_RS24105	COG3594	Acyltransferase
FYM93_RS24135	COG0544	peptidyl-prolyl cis-trans isomerase activity
FYM93_RS24140	COG0740	serine-type endopeptidase activity
FYM93_RS24145	COG0740	serine-type endopeptidase activity
FYM93_RS24150	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
FYM93_RS24160	COG0525	valine-tRNA ligase activity
FYM93_RS24165	COG0285	dihydrofolate synthase activity
FYM93_RS24175	COG0105	UTP biosynthetic process
FYM93_RS24180	COG1077	Cell shape determining protein MreB Mrl
FYM93_RS24195	COG0768	penicillin binding
FYM93_RS24200	COG0772	Belongs to the SEDS family
FYM93_RS24255	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FYM93_RS24260	COG0211	Belongs to the bacterial ribosomal protein bL27 family
FYM93_RS24265	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FYM93_RS24270	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FYM93_RS24275	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
FYM93_RS24280	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
FYM93_RS24290	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
FYM93_RS24305	COG0501	Belongs to the peptidase M48B family
FYM93_RS24315	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
FYM93_RS24325	COG0799	negative regulation of ribosome biogenesis
FYM93_RS24330	COG0588	phosphoglycerate mutase activity
FYM93_RS24355	COG0495	leucyl-tRNA aminoacylation
FYM93_RS24365	COG1307	EDD domain protein, DegV family
FYM93_RS24370	COG1555	photosystem II stabilization
FYM93_RS24385	COG2353	YceI-like domain
FYM93_RS24400	COG0268	Binds directly to 16S ribosomal RNA
FYM93_RS24410	COG0481	GTPase activity
FYM93_RS24445	COG1420	regulation of RNA biosynthetic process
FYM93_RS24450	COG0484	heat shock protein binding
FYM93_RS24475	COG0793	Belongs to the peptidase S41A family
FYM93_RS24475	COG4946	Tricorn protease homolog
FYM93_RS24485	COG0537	adenosine 5'-monophosphoramidase activity
FYM93_RS24490	COG1234	tRNA 3'-trailer cleavage
FYM93_RS24495	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FYM93_RS24510	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
FYM93_RS24520	COG2315	Protein conserved in bacteria
FYM93_RS24525	COG1619	proteins homologs of microcin C7 resistance protein MccF
FYM93_RS24560	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FYM93_RS24590	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FYM93_RS24615	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FYM93_RS24620	COG4608	Belongs to the ABC transporter superfamily
FYM93_RS24625	COG0444	Belongs to the ABC transporter superfamily
FYM93_RS24635	COG0747	negative chemotaxis
FYM93_RS24650	COG5297	Belongs to the glycosyl hydrolase family 6
FYM93_RS24660	COG1381	Involved in DNA repair and RecF pathway recombination
FYM93_RS24665	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FYM93_RS24675	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FYM93_RS24680	COG1121	(ABC) transporter
FYM93_RS24690	COG0423	glycine-tRNA ligase activity
FYM93_RS24700	COG0667	Aldo Keto reductase
FYM93_RS24715	COG0477	Major facilitator Superfamily
FYM93_RS24745	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
FYM93_RS24750	COG1940	carbohydrate kinase activity
FYM93_RS24750	COG1846	Transcriptional regulator
FYM93_RS24755	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FYM93_RS24755	COG0574	Belongs to the PEP-utilizing enzyme family
FYM93_RS24775	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FYM93_RS24890	COG1175	transmembrane transport
FYM93_RS24895	COG0395	ABC-type sugar transport system, permease component
FYM93_RS24920	COG2949	membrane
FYM93_RS24925	COG0232	Belongs to the dGTPase family. Type 2 subfamily
FYM93_RS24935	COG0358	DNA primase activity
FYM93_RS24940	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FYM93_RS24955	COG1070	Carbohydrate kinase
FYM93_RS25000	COG1077	Cell shape determining protein MreB Mrl
FYM93_RS25025	COG1404	Belongs to the peptidase S8 family
FYM93_RS25030	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
FYM93_RS25030	COG0825	malonyl-CoA metabolic process
FYM93_RS25035	COG0318	PFAM AMP-dependent synthetase and ligase
FYM93_RS25090	COG0477	Major facilitator Superfamily
FYM93_RS25115	COG2130	NADP-dependent
FYM93_RS25135	COG1335	isochorismatase
FYM93_RS25140	COG1335	isochorismatase
FYM93_RS25170	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FYM93_RS25175	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FYM93_RS25180	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FYM93_RS25215	COG0789	Transcriptional regulator
FYM93_RS25220	COG0667	Aldo Keto reductase
FYM93_RS25235	COG1309	transcriptional regulator
FYM93_RS25240	COG0477	Major facilitator Superfamily
FYM93_RS25245	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FYM93_RS25290	COG1358	cellular component organization or biogenesis
FYM93_RS25305	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FYM93_RS25345	COG3973	AAA domain
FYM93_RS25415	COG0583	DNA-binding transcription factor activity
FYM93_RS25430	COG4122	O-methyltransferase activity
FYM93_RS25440	COG0477	Major facilitator Superfamily
FYM93_RS25450	COG0183	Belongs to the thiolase family
FYM93_RS25455	COG2124	cytochrome p450
FYM93_RS25460	COG3619	membrane
FYM93_RS25465	COG0741	lytic transglycosylase activity
FYM93_RS25475	COG3845	ABC transporter
FYM93_RS25540	COG1309	transcriptional regulator
FYM93_RS25545	COG0438	transferase activity, transferring glycosyl groups
FYM93_RS25565	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FYM93_RS25575	COG0860	N-Acetylmuramoyl-L-alanine amidase
FYM93_RS25575	COG2247	cell wall binding repeat
FYM93_RS25585	COG0477	Major facilitator Superfamily
FYM93_RS25600	COG2197	response regulator
FYM93_RS25605	COG4585	Histidine kinase
FYM93_RS25615	COG1131	(ABC) transporter
FYM93_RS25620	COG2030	dehydratase
FYM93_RS25630	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS25640	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FYM93_RS25655	COG0800	Aldolase
FYM93_RS25675	COG3022	response to hydroperoxide
FYM93_RS25680	COG0557	exoribonuclease II activity
FYM93_RS25775	COG2259	Doxx family
FYM93_RS25785	COG1686	Belongs to the peptidase S11 family
FYM93_RS25795	COG2814	Major facilitator Superfamily
FYM93_RS25800	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FYM93_RS25820	COG0672	)-iron permease
FYM93_RS25825	COG2837	iron assimilation
FYM93_RS25880	COG1994	Peptidase M50
FYM93_RS25905	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
FYM93_RS25910	COG0477	Major facilitator Superfamily
FYM93_RS25925	COG2814	Major facilitator Superfamily
FYM93_RS25995	COG0583	DNA-binding transcription factor activity
FYM93_RS26005	COG0596	Alpha beta hydrolase
FYM93_RS26025	COG1959	2 iron, 2 sulfur cluster binding
FYM93_RS26030	COG1017	nitric oxide dioxygenase activity
FYM93_RS26030	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FYM93_RS26035	COG0174	glutamine synthetase
FYM93_RS26050	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
FYM93_RS26060	COG1609	Transcriptional regulator
FYM93_RS26065	COG1653	transport
FYM93_RS26070	COG1175	transmembrane transport
FYM93_RS26075	COG3833	ABC-type maltose transport systems, permease component
FYM93_RS26080	COG0366	Alpha amylase catalytic
FYM93_RS26095	COG1309	transcriptional regulator
FYM93_RS26120	COG2197	response regulator
FYM93_RS26135	COG0745	RESPONSE REGULATOR receiver
FYM93_RS26165	COG0501	Belongs to the peptidase M48B family
FYM93_RS26185	COG0174	glutamine synthetase
FYM93_RS26205	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FYM93_RS26210	COG0321	lipoyl(octanoyl) transferase activity
FYM93_RS26225	COG0456	acetyltransferase
FYM93_RS26225	COG0454	-acetyltransferase
FYM93_RS26250	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FYM93_RS26265	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FYM93_RS26270	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FYM93_RS26275	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
FYM93_RS26295	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
FYM93_RS26315	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FYM93_RS26340	COG4585	Histidine kinase
FYM93_RS26345	COG2197	response regulator
FYM93_RS26350	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FYM93_RS26355	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
FYM93_RS26385	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYM93_RS26395	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FYM93_RS26400	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FYM93_RS26410	COG1376	ErfK ybiS ycfS ynhG family protein
FYM93_RS26420	COG1845	cytochrome c oxidase, subunit III
FYM93_RS26425	COG2010	Cytochrome c
FYM93_RS26430	COG0723	plastoquinol--plastocyanin reductase activity
FYM93_RS26435	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FYM93_RS26440	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FYM93_RS26445	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FYM93_RS26475	COG0791	NLP P60 protein
FYM93_RS26475	COG3883	PFAM NLP P60 protein
FYM93_RS26490	COG0534	Mate efflux family protein
FYM93_RS26500	COG0438	transferase activity, transferring glycosyl groups
FYM93_RS26520	COG0003	Pfam Anion-transporting ATPase
FYM93_RS26530	COG1940	carbohydrate kinase activity
FYM93_RS26555	COG4585	Histidine kinase
FYM93_RS26565	COG0205	6-phosphofructokinase activity
FYM93_RS26580	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
FYM93_RS26590	COG2193	ferroxidase activity
FYM93_RS26595	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FYM93_RS26600	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
FYM93_RS26605	COG0515	serine threonine protein kinase
FYM93_RS26605	COG2815	serine threonine protein kinase
FYM93_RS26610	COG2022	thiamine diphosphate biosynthetic process
FYM93_RS26620	COG2022	thiamine diphosphate biosynthetic process
FYM93_RS26620	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYM93_RS26640	COG0352	thiamine-phosphate diphosphorylase activity
FYM93_RS26665	COG1309	transcriptional regulator
FYM93_RS26670	COG1511	domain protein
FYM93_RS26675	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
FYM93_RS26705	COG0714	Associated with various cellular activities
FYM93_RS26715	COG0275	rRNA processing
FYM93_RS26730	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FYM93_RS26740	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FYM93_RS26745	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
FYM93_RS26755	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
FYM93_RS26760	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FYM93_RS26765	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FYM93_RS26770	COG1496	oxidoreductase activity
FYM93_RS26780	COG1799	cell septum assembly
FYM93_RS26790	COG3599	regulation of cell shape
FYM93_RS26795	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FYM93_RS26810	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
FYM93_RS26820	COG2153	protein acetylation
FYM93_RS26865	COG0587	DNA-directed DNA polymerase activity
FYM93_RS26915	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FYM93_RS26920	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FYM93_RS26925	COG0131	Imidazoleglycerol-phosphate dehydratase
FYM93_RS26930	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FYM93_RS26935	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
FYM93_RS26940	COG0251	oxidation-reduction process
FYM93_RS26945	COG0107	imidazoleglycerol-phosphate synthase activity
FYM93_RS26960	COG0346	lactoylglutathione lyase activity
FYM93_RS26970	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FYM93_RS26995	COG0134	indole-3-glycerol-phosphate synthase activity
FYM93_RS27005	COG0133	tryptophan synthase activity
FYM93_RS27010	COG0159	tryptophan synthase activity
FYM93_RS27020	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
FYM93_RS27030	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYM93_RS27035	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYM93_RS27065	COG0070	glutamate synthase
FYM93_RS27065	COG0069	glutamate synthase activity
FYM93_RS27065	COG0067	glutamate synthase
FYM93_RS27085	COG1960	acyl-CoA dehydrogenase activity
FYM93_RS27090	COG1960	acyl-CoA dehydrogenase activity
FYM93_RS27095	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS27100	COG1309	transcriptional regulator
FYM93_RS27125	COG1024	Enoyl-CoA hydratase
FYM93_RS27135	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS27155	COG0287	Prephenate dehydrogenase
FYM93_RS27155	COG1605	Chorismate mutase
FYM93_RS27220	COG0683	leucine binding
FYM93_RS27225	COG2050	protein possibly involved in aromatic compounds catabolism
FYM93_RS27260	COG1643	Atp-dependent helicase
FYM93_RS27265	COG2226	methyltransferase
FYM93_RS27270	COG0539	negative regulation of cytoplasmic translation
FYM93_RS27285	COG0237	dephospho-CoA kinase activity
FYM93_RS27300	COG2226	methyltransferase
FYM93_RS27375	COG0598	Magnesium transport protein CorA
FYM93_RS27380	COG2226	methyltransferase
FYM93_RS27385	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
FYM93_RS27385	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
FYM93_RS27390	COG2313	pseudouridylate synthase activity
FYM93_RS27395	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FYM93_RS27400	COG0584	glycerophosphoryl diester phosphodiesterase
FYM93_RS27410	COG0556	nucleotide-excision repair
FYM93_RS27430	COG0387	Pfam Sodium calcium exchanger
FYM93_RS27435	COG0477	Major facilitator Superfamily
FYM93_RS27440	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FYM93_RS27445	COG1126	abc transporter atp-binding protein
FYM93_RS27450	COG0765	amino acid transport
FYM93_RS27455	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYM93_RS27470	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FYM93_RS27480	COG1609	Transcriptional regulator
FYM93_RS27495	COG0322	excinuclease ABC activity
FYM93_RS27500	COG1660	Displays ATPase and GTPase activities
FYM93_RS27510	COG1481	regulation of sporulation
FYM93_RS27515	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FYM93_RS27520	COG0126	phosphoglycerate kinase activity
FYM93_RS27525	COG0149	triose-phosphate isomerase activity
FYM93_RS27530	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FYM93_RS27545	COG0166	Belongs to the GPI family
FYM93_RS27555	COG0363	glucosamine-6-phosphate deaminase activity
FYM93_RS27570	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FYM93_RS27585	COG0109	protoheme IX farnesyltransferase activity
FYM93_RS27610	COG1131	(ABC) transporter
FYM93_RS27615	COG2746	aminoglycoside 3-N-acetyltransferase activity
FYM93_RS27630	COG0719	Fe-S assembly protein
FYM93_RS27640	COG0396	ATPase activity
FYM93_RS27645	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FYM93_RS27650	COG0822	iron-sulfur transferase activity
FYM93_RS27665	COG3226	Transcriptional regulator
FYM93_RS27670	COG2171	N-acyltransferase activity
FYM93_RS27680	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FYM93_RS27735	COG0395	ABC-type sugar transport system, permease component
FYM93_RS27740	COG1175	transmembrane transport
FYM93_RS27750	COG1349	DNA-binding transcription factor activity
FYM93_RS27790	COG1414	Transcriptional regulator
FYM93_RS27805	COG0156	8-amino-7-oxononanoate synthase activity
FYM93_RS27810	COG5285	phytanoyl-CoA dioxygenase
FYM93_RS27815	COG1917	Cupin 2, conserved barrel domain protein
FYM93_RS27820	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FYM93_RS27825	COG0456	acetyltransferase
FYM93_RS27830	COG2318	DinB family
FYM93_RS27835	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FYM93_RS27845	COG0765	amino acid transport
FYM93_RS27870	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
FYM93_RS27905	COG1797	cobyrinic acid a,c-diamide synthase activity
FYM93_RS27925	COG1492	cobalamin metabolic process
FYM93_RS27930	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
FYM93_RS27950	COG0235	Class ii aldolase
FYM93_RS27970	COG0488	(ABC) transporter
FYM93_RS27980	COG1024	Enoyl-CoA hydratase
FYM93_RS27990	COG1302	Protein conserved in bacteria
FYM93_RS28020	COG3387	PFAM Glycoside hydrolase 15-related
FYM93_RS28035	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FYM93_RS28045	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYM93_RS28050	COG1404	Belongs to the peptidase S8 family
FYM93_RS28060	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FYM93_RS28065	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FYM93_RS28085	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FYM93_RS28130	COG2186	Transcriptional regulator
FYM93_RS28145	COG0588	phosphoglycerate mutase activity
FYM93_RS28150	COG3830	Belongs to the UPF0237 family
FYM93_RS28150	COG0560	Phosphoserine phosphatase
FYM93_RS28155	COG1716	ATPase activity
FYM93_RS28155	COG1131	(ABC) transporter
FYM93_RS28155	COG0842	Transport permease protein
FYM93_RS28165	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
FYM93_RS28170	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS28175	COG4585	Histidine kinase
FYM93_RS28180	COG2197	response regulator
FYM93_RS28195	COG1119	ATPase activity
FYM93_RS28215	COG1881	PFAM PEBP family protein
FYM93_RS28225	COG2094	Belongs to the DNA glycosylase MPG family
FYM93_RS28255	COG0647	UMP catabolic process
FYM93_RS28260	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYM93_RS28265	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYM93_RS28270	COG1120	ATPase activity
FYM93_RS28290	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FYM93_RS28295	COG0497	DNA recombination
FYM93_RS28320	COG3387	PFAM Glycoside hydrolase 15-related
FYM93_RS28325	COG0504	CTP synthase activity
FYM93_RS28330	COG0494	nUDIX hydrolase
FYM93_RS28340	COG0686	Belongs to the AlaDH PNT family
FYM93_RS28355	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
FYM93_RS28360	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
FYM93_RS28365	COG1187	pseudouridine synthase activity
FYM93_RS28375	COG3541	Predicted nucleotidyltransferase
FYM93_RS28400	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
FYM93_RS28410	COG1160	GTP binding
FYM93_RS28425	COG1652	LysM domain
FYM93_RS28430	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FYM93_RS28440	COG0671	phosphoesterase, PA-phosphatase related
FYM93_RS28455	COG0477	Major facilitator Superfamily
FYM93_RS28460	COG1960	acyl-CoA dehydrogenase activity
FYM93_RS28465	COG1799	cell septum assembly
FYM93_RS28475	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYM93_RS28480	COG0765	amino acid transport
FYM93_RS28490	COG1126	abc transporter atp-binding protein
FYM93_RS28515	COG0587	DNA-directed DNA polymerase activity
FYM93_RS28545	COG2264	protein methyltransferase activity
FYM93_RS28560	COG1725	Transcriptional regulator
FYM93_RS28585	COG1649	PFAM Uncharacterised BCR, COG1649
FYM93_RS28585	COG0726	polysaccharide deacetylase
FYM93_RS28590	COG1216	Glycosyl transferase, family 2
FYM93_RS28605	COG2755	lipolytic protein G-D-S-L family
FYM93_RS28615	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYM93_RS28630	COG2188	Transcriptional regulator
FYM93_RS28635	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
FYM93_RS28645	COG1309	transcriptional regulator
FYM93_RS28650	COG0243	molybdopterin cofactor binding
FYM93_RS28675	COG0640	Transcriptional regulator
FYM93_RS28685	COG1960	acyl-CoA dehydrogenase activity
FYM93_RS28730	COG3876	Protein conserved in bacteria
FYM93_RS28740	COG0318	PFAM AMP-dependent synthetase and ligase
FYM93_RS28760	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
FYM93_RS28790	COG3265	gluconokinase activity
FYM93_RS28795	COG2186	Transcriptional regulator
FYM93_RS28800	COG3012	SEC-C Motif Domain Protein
FYM93_RS28815	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
FYM93_RS28815	COG1796	DNA polymerase
FYM93_RS28855	COG0667	Aldo Keto reductase
FYM93_RS28860	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FYM93_RS28865	COG0598	Magnesium transport protein CorA
FYM93_RS28870	COG0406	alpha-ribazole phosphatase activity
FYM93_RS28885	COG0215	cysteine-tRNA ligase activity
FYM93_RS28895	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FYM93_RS28900	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FYM93_RS28905	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FYM93_RS28910	COG1414	Transcriptional regulator
FYM93_RS28915	COG1410	methionine synthase
FYM93_RS28915	COG0646	methionine synthase
FYM93_RS28925	COG0747	negative chemotaxis
FYM93_RS28930	COG2197	response regulator
FYM93_RS28940	COG1994	Peptidase M50
FYM93_RS28940	COG0517	IMP dehydrogenase activity
FYM93_RS28965	COG1222	aaa ATPase
FYM93_RS28970	COG4122	O-methyltransferase activity
FYM93_RS28985	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
FYM93_RS28990	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
FYM93_RS28995	COG1609	Transcriptional regulator
FYM93_RS29005	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
FYM93_RS29010	COG0545	Peptidyl-prolyl cis-trans isomerase
FYM93_RS29040	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FYM93_RS29045	COG0805	protein transport
FYM93_RS29080	COG0564	pseudouridine synthase activity
FYM93_RS29100	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FYM93_RS29105	COG4175	Glycine betaine
FYM93_RS29105	COG0517	IMP dehydrogenase activity
FYM93_RS29110	COG4176	ABC-type proline glycine betaine transport system permease component
FYM93_RS29120	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FYM93_RS29135	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FYM93_RS29140	COG2186	Transcriptional regulator
FYM93_RS29145	COG0174	glutamine synthetase
FYM93_RS29150	COG1012	belongs to the aldehyde dehydrogenase family
FYM93_RS29190	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
FYM93_RS29195	COG0291	Belongs to the bacterial ribosomal protein bL35 family
FYM93_RS29200	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
FYM93_RS29205	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FYM93_RS29210	COG5002	protein histidine kinase activity
FYM93_RS29215	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
FYM93_RS29220	COG0072	phenylalanine-tRNA ligase activity
FYM93_RS29220	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FYM93_RS29250	COG1649	PFAM Uncharacterised BCR, COG1649
FYM93_RS29285	COG0463	Glycosyl transferase, family 2
FYM93_RS29315	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FYM93_RS29320	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
FYM93_RS29325	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FYM93_RS29330	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FYM93_RS29335	COG1438	arginine binding
FYM93_RS29350	COG1132	(ABC) transporter
FYM93_RS29375	COG0745	RESPONSE REGULATOR receiver
FYM93_RS29380	COG2205	protein histidine kinase activity
FYM93_RS29395	COG0137	argininosuccinate synthase activity
FYM93_RS29400	COG0165	Argininosuccinate lyase
FYM93_RS29415	COG0477	Major facilitator Superfamily
FYM93_RS29420	COG2132	Multicopper oxidase
FYM93_RS29450	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FYM93_RS29455	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FYM93_RS29460	COG2011	ABC-type metal ion transport system permease component
FYM93_RS29465	COG1464	Belongs to the NlpA lipoprotein family
FYM93_RS29480	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
FYM93_RS29485	COG1648	precorrin-2 dehydrogenase activity
FYM93_RS29485	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FYM93_RS29530	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FYM93_RS29590	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FYM93_RS29605	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FYM93_RS29625	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FYM93_RS29630	COG1560	Kdo2-lipid A biosynthetic process
FYM93_RS29635	COG0438	transferase activity, transferring glycosyl groups
FYM93_RS29645	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
FYM93_RS29650	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
FYM93_RS29655	COG0217	transcriptional regulatory protein
FYM93_RS29660	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
FYM93_RS29665	COG0632	four-way junction helicase activity
FYM93_RS29670	COG2255	four-way junction helicase activity
FYM93_RS29685	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FYM93_RS29690	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FYM93_RS29695	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FYM93_RS29705	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FYM93_RS29710	COG1196	nuclear chromosome segregation
FYM93_RS29715	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FYM93_RS29725	COG0124	histidyl-tRNA synthetase
FYM93_RS29740	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
FYM93_RS29760	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FYM93_RS29765	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FYM93_RS29770	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FYM93_RS29775	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FYM93_RS29780	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
FYM93_RS29785	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FYM93_RS29790	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
FYM93_RS29800	COG0006	proline dipeptidase activity
FYM93_RS29805	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FYM93_RS29810	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FYM93_RS29820	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
FYM93_RS29825	COG0540	Belongs to the ATCase OTCase family
FYM93_RS29830	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FYM93_RS29840	COG0505	Belongs to the CarA family
FYM93_RS29845	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FYM93_RS29850	COG0167	dihydroorotate dehydrogenase activity
FYM93_RS29855	COG0284	orotidine-5'-phosphate decarboxylase activity
FYM93_RS29865	COG0194	GDP metabolic process
FYM93_RS29880	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
FYM93_RS29885	COG0539	negative regulation of cytoplasmic translation
FYM93_RS29900	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FYM93_RS29915	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FYM93_RS29920	COG2390	Transcriptional regulator
FYM93_RS29935	COG3629	intracellular signal transduction
FYM93_RS29935	COG3903	Transcriptional regulator
FYM93_RS29955	COG0531	amino acid
FYM93_RS29965	COG2188	Transcriptional regulator
FYM93_RS29975	COG1176	ABC-type spermidine putrescine transport system, permease component I
FYM93_RS29985	COG3842	ATPase activity
FYM93_RS29990	COG0546	phosphoglycolate phosphatase activity
FYM93_RS30015	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FYM93_RS30035	COG2233	PERMEase
FYM93_RS30045	COG0738	Major facilitator superfamily
FYM93_RS30065	COG3201	nicotinamide mononucleotide transporter
FYM93_RS30070	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FYM93_RS30070	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FYM93_RS30075	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
FYM93_RS30080	COG0140	phosphoribosyl-ATP diphosphatase activity
FYM93_RS30085	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
FYM93_RS30135	COG1960	acyl-CoA dehydrogenase activity
FYM93_RS30160	COG1216	Glycosyl transferase, family 2
FYM93_RS30175	COG2270	Major facilitator Superfamily
FYM93_RS30185	COG2364	Membrane
FYM93_RS30225	COG0438	transferase activity, transferring glycosyl groups
FYM93_RS30235	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYM93_RS30240	COG1984	allophanate hydrolase subunit 2
FYM93_RS30245	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FYM93_RS30250	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
FYM93_RS30255	COG4336	lyase activity
FYM93_RS30260	COG2814	Major facilitator Superfamily
FYM93_RS30285	COG1414	Transcriptional regulator
FYM93_RS30305	COG2018	Roadblock/LC7 domain
FYM93_RS30350	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FYM93_RS30360	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FYM93_RS30395	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FYM93_RS30415	COG1716	ATPase activity
FYM93_RS30435	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FYM93_RS30445	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FYM93_RS30445	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FYM93_RS30520	COG0509	glycine decarboxylation via glycine cleavage system
FYM93_RS30555	COG0697	spore germination
FYM93_RS30570	COG0697	spore germination
FYM93_RS30610	COG0747	negative chemotaxis
FYM93_RS30615	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
FYM93_RS30630	COG2318	DinB family
FYM93_RS30645	COG0673	inositol 2-dehydrogenase activity
FYM93_RS30650	COG0815	Transfers the fatty acyl group on membrane lipoproteins
FYM93_RS30675	COG0183	Belongs to the thiolase family
FYM93_RS30690	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FYM93_RS30715	COG3321	synthase
FYM93_RS30715	COG0604	alcohol dehydrogenase
FYM93_RS30730	COG0596	Alpha beta hydrolase
FYM93_RS30735	COG1819	glycosyl
FYM93_RS30760	COG0110	maltose O-acetyltransferase activity
FYM93_RS30785	COG0640	Transcriptional regulator
FYM93_RS30790	COG0531	amino acid
FYM93_RS30795	COG1832	CoA-binding protein
FYM93_RS30810	COG1739	Uncharacterized protein family UPF0029
FYM93_RS30815	COG0420	3'-5' exonuclease activity
FYM93_RS30820	COG0419	ATPase involved in DNA repair
FYM93_RS30855	COG0626	cystathionine gamma-synthase activity
FYM93_RS30875	COG2267	carboxylic ester hydrolase activity
FYM93_RS30885	COG1595	DNA-templated transcription, initiation
FYM93_RS30890	COG2188	Transcriptional regulator
FYM93_RS30900	COG1940	carbohydrate kinase activity
FYM93_RS30905	COG2197	response regulator
FYM93_RS30910	COG4585	Histidine kinase
FYM93_RS30930	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FYM93_RS30950	COG0456	acetyltransferase
FYM93_RS30975	COG2226	methyltransferase
FYM93_RS30980	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FYM93_RS30985	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FYM93_RS30990	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FYM93_RS31025	COG0740	serine-type endopeptidase activity
FYM93_RS31035	COG0831	urea catabolic process
FYM93_RS31040	COG0832	Belongs to the urease beta subunit family
FYM93_RS31045	COG0804	urea catabolic process
FYM93_RS31055	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
FYM93_RS31060	COG0829	nickel cation binding
FYM93_RS31065	COG0204	Acyl-transferase
FYM93_RS31075	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FYM93_RS31080	COG1834	amidinotransferase
FYM93_RS31085	COG1522	sequence-specific DNA binding
FYM93_RS31100	COG0205	6-phosphofructokinase activity
FYM93_RS31105	COG3442	glutamine amidotransferase
FYM93_RS31115	COG0242	peptide deformylase activity
FYM93_RS31125	COG1960	acyl-CoA dehydrogenase activity
FYM93_RS31135	COG2124	cytochrome p450
FYM93_RS31140	COG3424	synthase
FYM93_RS31160	COG1793	dna ligase
FYM93_RS31175	COG1960	acyl-CoA dehydrogenase activity
FYM93_RS31180	COG1960	acyl-CoA dehydrogenase activity
FYM93_RS31215	COG0586	Pfam SNARE associated Golgi protein
FYM93_RS31290	COG0464	growth
FYM93_RS31305	COG2197	response regulator
FYM93_RS31315	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FYM93_RS31320	COG2423	ornithine cyclodeaminase activity
FYM93_RS31350	COG3903	Transcriptional regulator
FYM93_RS31350	COG3629	intracellular signal transduction
FYM93_RS31375	COG3959	Transketolase, thiamine diphosphate binding domain
FYM93_RS31385	COG0443	Heat shock 70 kDa protein
FYM93_RS31395	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FYM93_RS31400	COG0300	oxidoreductase activity
FYM93_RS31400	COG0318	PFAM AMP-dependent synthetase and ligase
FYM93_RS31400	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FYM93_RS31400	COG3321	synthase
FYM93_RS31400	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS31405	COG0318	PFAM AMP-dependent synthetase and ligase
FYM93_RS31410	COG3251	PFAM MbtH domain protein
FYM93_RS31415	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FYM93_RS31450	COG2264	protein methyltransferase activity
FYM93_RS31455	COG0477	Major facilitator Superfamily
FYM93_RS31480	COG0367	asparagine synthase
FYM93_RS31490	COG2986	histidine ammonia-lyase
FYM93_RS31495	COG2197	response regulator
FYM93_RS31505	COG4865	methylaspartate mutase activity
FYM93_RS31525	COG1350	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
FYM93_RS31535	COG1960	acyl-CoA dehydrogenase activity
FYM93_RS31540	COG0662	Cupin 2, conserved barrel domain protein
FYM93_RS31550	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FYM93_RS31560	COG0512	Glutamine amidotransferase of anthranilate synthase
FYM93_RS31560	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FYM93_RS31570	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYM93_RS31645	COG0714	Associated with various cellular activities
FYM93_RS31665	COG0583	DNA-binding transcription factor activity
FYM93_RS31670	COG1408	metallophosphoesterase
FYM93_RS31700	COG1278	Cold shock
FYM93_RS31730	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
FYM93_RS31755	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS31765	COG0475	glutathione-regulated potassium exporter activity
FYM93_RS31775	COG0477	Major facilitator Superfamily
FYM93_RS31800	COG1012	belongs to the aldehyde dehydrogenase family
FYM93_RS31825	COG1940	carbohydrate kinase activity
FYM93_RS31875	COG2018	Roadblock/LC7 domain
FYM93_RS31885	COG1946	Acyl-CoA thioesterase
FYM93_RS31900	COG0254	rRNA binding
FYM93_RS31910	COG1132	(ABC) transporter
FYM93_RS31915	COG1132	(ABC) transporter
FYM93_RS31945	COG1132	(ABC) transporter
FYM93_RS31955	COG2072	flavoprotein involved in K transport
FYM93_RS31960	COG0432	Pfam Uncharacterised protein family UPF0047
FYM93_RS31970	COG1472	Belongs to the glycosyl hydrolase 3 family
FYM93_RS31995	COG0477	Major facilitator Superfamily
FYM93_RS32000	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FYM93_RS32015	COG2706	6-phosphogluconolactonase activity
FYM93_RS32030	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
FYM93_RS32050	COG1960	acyl-CoA dehydrogenase activity
FYM93_RS32070	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FYM93_RS32075	COG1902	pentaerythritol trinitrate reductase activity
FYM93_RS32080	COG0640	Transcriptional regulator
FYM93_RS32095	COG1309	transcriptional regulator
FYM93_RS32115	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYM93_RS32150	COG0584	glycerophosphoryl diester phosphodiesterase
FYM93_RS32200	COG2086	electron transfer activity
FYM93_RS32205	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
FYM93_RS32230	COG3345	alpha-galactosidase
FYM93_RS32250	COG1660	Displays ATPase and GTPase activities
FYM93_RS32255	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FYM93_RS32265	COG0445	tRNA wobble uridine modification
FYM93_RS32290	COG0180	Tryptophanyl-tRNA synthetase
FYM93_RS32335	COG1595	DNA-templated transcription, initiation
FYM93_RS32345	COG1349	DNA-binding transcription factor activity
FYM93_RS32360	COG2813	Specifically methylates the guanine in position
FYM93_RS32380	COG1940	carbohydrate kinase activity
FYM93_RS32425	COG1349	DNA-binding transcription factor activity
FYM93_RS32460	COG1215	transferase activity, transferring glycosyl groups
FYM93_RS32465	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FYM93_RS32490	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS32515	COG4106	trans-aconitate 2-methyltransferase activity
FYM93_RS32550	COG3469	chitinase activity
FYM93_RS32560	COG1309	transcriptional regulator
FYM93_RS32565	COG2409	Drug exporters of the RND superfamily
FYM93_RS32570	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FYM93_RS32585	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FYM93_RS32600	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FYM93_RS32635	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FYM93_RS32640	COG1993	acr, cog1993
FYM93_RS32645	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FYM93_RS32650	COG1968	undecaprenyl-diphosphatase activity
FYM93_RS32670	COG2066	Belongs to the glutaminase family
FYM93_RS32685	COG1686	Belongs to the peptidase S11 family
FYM93_RS32690	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FYM93_RS32705	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FYM93_RS32725	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FYM93_RS32740	COG2890	protein-(glutamine-N5) methyltransferase activity
FYM93_RS32765	COG1902	pentaerythritol trinitrate reductase activity
FYM93_RS32765	COG0446	pyridine nucleotide-disulphide oxidoreductase
FYM93_RS32780	COG5297	Belongs to the glycosyl hydrolase family 6
FYM93_RS32780	COG4733	cellulase activity
FYM93_RS32790	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
FYM93_RS32795	COG1461	Dihydroxyacetone kinase
FYM93_RS32800	COG2376	Dihydroxyacetone kinase
FYM93_RS32840	COG0464	growth
FYM93_RS32860	COG1674	ftsk spoiiie
FYM93_RS32885	COG1960	acyl-CoA dehydrogenase activity
FYM93_RS32910	COG0656	L-ascorbic acid biosynthetic process
FYM93_RS32920	COG0583	DNA-binding transcription factor activity
FYM93_RS32930	COG0443	Heat shock 70 kDa protein
FYM93_RS32935	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FYM93_RS32940	COG0484	heat shock protein binding
FYM93_RS32950	COG0542	response to heat
FYM93_RS32975	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS32980	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FYM93_RS32985	COG4989	oxidoreductase activity
FYM93_RS32995	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYM93_RS33000	COG0561	phosphatase activity
FYM93_RS33005	COG0494	nUDIX hydrolase
FYM93_RS33020	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FYM93_RS33045	COG1131	(ABC) transporter
FYM93_RS33050	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FYM93_RS33055	COG0662	Cupin 2, conserved barrel domain protein
FYM93_RS33060	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
FYM93_RS33070	COG2070	2-Nitropropane dioxygenase
FYM93_RS33080	COG0318	PFAM AMP-dependent synthetase and ligase
FYM93_RS33105	COG1024	Enoyl-CoA hydratase
FYM93_RS33145	COG0510	thiamine kinase activity
FYM93_RS33165	COG3511	phospholipase C
FYM93_RS33170	COG0673	inositol 2-dehydrogenase activity
FYM93_RS33180	COG0367	asparagine synthase
FYM93_RS33225	COG3250	beta-galactosidase activity
FYM93_RS33230	COG0531	amino acid
FYM93_RS33260	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FYM93_RS33270	COG0583	DNA-binding transcription factor activity
FYM93_RS33275	COG0667	Aldo Keto reductase
FYM93_RS33300	COG1191	sigma factor activity
FYM93_RS33325	COG0328	RNA-DNA hybrid ribonuclease activity
FYM93_RS33330	COG0667	Aldo Keto reductase
FYM93_RS33400	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FYM93_RS33440	COG5002	protein histidine kinase activity
FYM93_RS33490	COG1252	NADH dehydrogenase
FYM93_RS33505	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
FYM93_RS33510	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
FYM93_RS33515	COG3281	Trehalose synthase
FYM93_RS33525	COG0366	Alpha amylase catalytic
FYM93_RS33565	COG0842	Transport permease protein
FYM93_RS33575	COG0181	hydroxymethylbilane synthase activity
FYM93_RS33580	COG1793	dna ligase
FYM93_RS33605	COG2208	phosphoserine phosphatase activity
FYM93_RS33620	COG0656	L-ascorbic acid biosynthetic process
FYM93_RS33640	COG0596	Alpha beta hydrolase
FYM93_RS33665	COG0009	L-threonylcarbamoyladenylate synthase
FYM93_RS33685	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
FYM93_RS33710	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
FYM93_RS33715	COG0673	inositol 2-dehydrogenase activity
FYM93_RS33820	COG0437	4 iron, 4 sulfur cluster binding
FYM93_RS33840	COG0477	Major facilitator Superfamily
FYM93_RS33845	COG0586	Pfam SNARE associated Golgi protein
FYM93_RS33850	COG0667	Aldo Keto reductase
FYM93_RS33895	COG0438	transferase activity, transferring glycosyl groups
FYM93_RS33905	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FYM93_RS33910	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FYM93_RS33950	COG0628	permease
FYM93_RS33960	COG1285	pathogenesis
FYM93_RS33970	COG1024	Enoyl-CoA hydratase
FYM93_RS33970	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FYM93_RS33975	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
FYM93_RS33980	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
FYM93_RS33985	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
FYM93_RS33990	COG0298	carbon dioxide binding
FYM93_RS34005	COG0375	protein maturation
FYM93_RS34025	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
FYM93_RS34060	COG0701	Predicted permease
FYM93_RS34075	COG0589	response to stress
FYM93_RS34080	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
FYM93_RS34095	COG0517	IMP dehydrogenase activity
FYM93_RS34095	COG0516	GMP reductase activity
FYM93_RS34110	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
FYM93_RS34185	COG0640	Transcriptional regulator
FYM93_RS34190	COG1316	TRANSCRIPTIONal
FYM93_RS34205	COG1090	epimerase
FYM93_RS34210	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FYM93_RS34215	COG2409	Drug exporters of the RND superfamily
FYM93_RS34235	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FYM93_RS34245	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FYM93_RS34275	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FYM93_RS34290	COG0745	RESPONSE REGULATOR receiver
FYM93_RS34295	COG5002	protein histidine kinase activity
FYM93_RS34315	COG0768	penicillin binding
FYM93_RS34320	COG2172	sigma factor antagonist activity
FYM93_RS34320	COG1366	Belongs to the anti-sigma-factor antagonist family
FYM93_RS34320	COG2208	phosphoserine phosphatase activity
FYM93_RS34340	COG2080	2 iron, 2 sulfur cluster binding
FYM93_RS34345	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
FYM93_RS34350	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FYM93_RS34370	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FYM93_RS34385	COG2755	lipolytic protein G-D-S-L family
FYM93_RS34390	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYM93_RS34415	COG1584	GPR1 FUN34 yaaH family protein
FYM93_RS34445	COG4585	Histidine kinase
FYM93_RS34450	COG2197	response regulator
FYM93_RS34460	COG0583	DNA-binding transcription factor activity
FYM93_RS34470	COG0640	Transcriptional regulator
FYM93_RS34490	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
FYM93_RS34490	COG0617	tRNA 3'-terminal CCA addition
FYM93_RS34490	COG0517	IMP dehydrogenase activity
FYM93_RS34495	COG0589	response to stress
FYM93_RS34500	COG1228	amidohydrolase
FYM93_RS34560	COG2755	lipolytic protein G-D-S-L family
FYM93_RS34585	COG3979	chitinase
FYM93_RS34595	COG1177	transmembrane transport
FYM93_RS34600	COG1176	ABC-type spermidine putrescine transport system, permease component I
FYM93_RS34605	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FYM93_RS34610	COG3842	ATPase activity
FYM93_RS34630	COG1132	(ABC) transporter
FYM93_RS34660	COG0277	FAD linked oxidase domain protein
FYM93_RS34665	COG1597	lipid kinase activity
FYM93_RS34680	COG2837	iron assimilation
FYM93_RS34685	COG0542	response to heat
FYM93_RS34690	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FYM93_RS34720	COG1396	sequence-specific DNA binding
FYM93_RS34795	COG1131	(ABC) transporter
FYM93_RS34850	COG2873	o-acetylhomoserine
FYM93_RS34870	COG2132	Multicopper oxidase
FYM93_RS34875	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FYM93_RS34875	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FYM93_RS34875	COG1703	isobutyryl-CoA mutase activity
FYM93_RS34895	COG0604	alcohol dehydrogenase
FYM93_RS34900	COG0778	Nitroreductase
FYM93_RS34900	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
FYM93_RS34905	COG2226	methyltransferase
FYM93_RS34930	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FYM93_RS34980	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FYM93_RS35020	COG0477	Major facilitator Superfamily
FYM93_RS35045	COG0110	maltose O-acetyltransferase activity
FYM93_RS35155	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FYM93_RS35160	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FYM93_RS35165	COG4948	Mandelate Racemase Muconate Lactonizing
FYM93_RS35185	COG3896	Chloramphenicol phosphotransferase-like protein
FYM93_RS35235	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FYM93_RS35240	COG0405	Gamma-glutamyltransferase
FYM93_RS35245	COG1609	Transcriptional regulator
FYM93_RS35255	COG1879	ABC-type sugar transport system periplasmic component
FYM93_RS35260	COG1129	ABC transporter
FYM93_RS35265	COG1172	Belongs to the binding-protein-dependent transport system permease family
FYM93_RS35275	COG1609	Transcriptional regulator
FYM93_RS35295	COG4977	sequence-specific DNA binding
FYM93_RS35310	COG1136	(ABC) transporter
FYM93_RS35315	COG0577	efflux transmembrane transporter activity
FYM93_RS35355	COG1278	Cold shock
FYM93_RS35365	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FYM93_RS35380	COG0640	Transcriptional regulator
FYM93_RS35385	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS35385	COG3321	synthase
FYM93_RS35385	COG0604	alcohol dehydrogenase
FYM93_RS35435	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
FYM93_RS35505	COG2814	Major facilitator Superfamily
FYM93_RS35515	COG4260	virion core protein, lumpy skin disease virus
FYM93_RS35525	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
FYM93_RS35555	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYM93_RS35585	COG0702	epimerase
FYM93_RS35590	COG1846	Transcriptional regulator
FYM93_RS35595	COG2409	Drug exporters of the RND superfamily
FYM93_RS35605	COG0789	Transcriptional regulator
FYM93_RS35610	COG3046	protein related to deoxyribodipyrimidine photolyase
FYM93_RS35625	COG0076	glutamate decarboxylase activity
FYM93_RS35665	COG0702	epimerase
FYM93_RS35670	COG3631	Ketosteroid isomerase-related protein
FYM93_RS35725	COG0702	epimerase
FYM93_RS35730	COG1733	regulation of RNA biosynthetic process
FYM93_RS35735	COG1418	mRNA catabolic process
FYM93_RS35745	COG0277	FAD linked oxidase domain protein
FYM93_RS35750	COG1309	transcriptional regulator
FYM93_RS35775	COG1175	transmembrane transport
FYM93_RS35780	COG0395	ABC-type sugar transport system, permease component
FYM93_RS35785	COG0366	Alpha amylase catalytic
FYM93_RS35795	COG2124	cytochrome p450
FYM93_RS35815	COG3251	PFAM MbtH domain protein
FYM93_RS35825	COG2814	Major facilitator Superfamily
FYM93_RS35875	COG3321	synthase
FYM93_RS35875	COG0604	alcohol dehydrogenase
FYM93_RS35895	COG0604	alcohol dehydrogenase
FYM93_RS35905	COG2124	cytochrome p450
FYM93_RS35915	COG3629	intracellular signal transduction
FYM93_RS35955	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FYM93_RS35965	COG0667	Aldo Keto reductase
FYM93_RS35990	COG1309	transcriptional regulator
FYM93_RS36030	COG0395	ABC-type sugar transport system, permease component
FYM93_RS36035	COG1175	transmembrane transport
FYM93_RS36045	COG1609	Transcriptional regulator
FYM93_RS36110	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FYM93_RS36115	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FYM93_RS36130	COG1595	DNA-templated transcription, initiation
FYM93_RS36175	COG1349	DNA-binding transcription factor activity
FYM93_RS36190	COG3693	PFAM glycoside hydrolase, family 10
FYM93_RS36205	COG3979	chitinase
FYM93_RS36215	COG0583	DNA-binding transcription factor activity
FYM93_RS36225	COG1960	acyl-CoA dehydrogenase activity
FYM93_RS36230	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYM93_RS36235	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYM93_RS36245	COG4977	sequence-specific DNA binding
FYM93_RS36265	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
FYM93_RS36355	COG1191	sigma factor activity
FYM93_RS36405	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
FYM93_RS36420	COG0009	L-threonylcarbamoyladenylate synthase
FYM93_RS36440	COG1366	Belongs to the anti-sigma-factor antagonist family
FYM93_RS36445	COG1366	Belongs to the anti-sigma-factor antagonist family
FYM93_RS36450	COG2172	sigma factor antagonist activity
FYM93_RS36470	COG1295	ribonuclease BN
FYM93_RS36485	COG0028	Belongs to the TPP enzyme family
FYM93_RS36490	COG0069	glutamate synthase activity
FYM93_RS36505	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS36510	COG1959	2 iron, 2 sulfur cluster binding
FYM93_RS36520	COG1733	regulation of RNA biosynthetic process
FYM93_RS36530	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
FYM93_RS36545	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FYM93_RS36585	COG0275	rRNA processing
FYM93_RS36620	COG0535	radical SAM domain protein
FYM93_RS36625	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FYM93_RS36630	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FYM93_RS36665	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FYM93_RS36690	COG1349	DNA-binding transcription factor activity
FYM93_RS36695	COG1105	Belongs to the carbohydrate kinase PfkB family
FYM93_RS36700	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYM93_RS36700	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYM93_RS36700	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYM93_RS36775	COG3851	Histidine kinase
FYM93_RS36780	COG2197	response regulator
FYM93_RS36840	COG0604	alcohol dehydrogenase
FYM93_RS36875	COG2197	response regulator
FYM93_RS36950	COG2197	response regulator
FYM93_RS36955	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FYM93_RS36970	COG1309	transcriptional regulator
FYM93_RS36990	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
FYM93_RS37000	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
FYM93_RS37015	COG0142	geranyltranstransferase activity
FYM93_RS37050	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS37085	COG3321	synthase
FYM93_RS37085	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS37085	COG0604	alcohol dehydrogenase
FYM93_RS37090	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
FYM93_RS37095	COG1846	Transcriptional regulator
FYM93_RS37115	COG0667	Aldo Keto reductase
FYM93_RS37120	COG1309	transcriptional regulator
FYM93_RS37160	COG4977	sequence-specific DNA binding
FYM93_RS37170	COG0702	epimerase
FYM93_RS37315	COG0318	PFAM AMP-dependent synthetase and ligase
FYM93_RS37335	COG0477	Major facilitator Superfamily
FYM93_RS37340	COG2271	Major facilitator Superfamily
FYM93_RS37365	COG1028	Short-chain dehydrogenase reductase Sdr
FYM93_RS37425	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
FYM93_RS37440	COG0583	DNA-binding transcription factor activity
FYM93_RS37460	COG4251	negative regulation of phosphorylation
FYM93_RS37470	COG0784	Response regulator, receiver
FYM93_RS37480	COG0142	geranyltranstransferase activity
FYM93_RS37485	COG1119	ATPase activity
FYM93_RS37495	COG1024	Enoyl-CoA hydratase
FYM93_RS37500	COG2124	cytochrome p450