locus-tag	class	description
BEN82_RS00015	COG3293	Transposase
BEN82_RS00035	COG3293	Transposase
BEN82_RS00060	COG2801	Transposase and inactivated derivatives
BEN82_RS00075	COG2197	response regulator
BEN82_RS00080	COG4585	Histidine kinase
BEN82_RS00100	COG4591	ABC-type transport system involved in lipoprotein release permease component
BEN82_RS00100	COG1136	(ABC) transporter
BEN82_RS00125	COG2801	Transposase and inactivated derivatives
BEN82_RS00205	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BEN82_RS00245	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BEN82_RS00265	COG0022	dehydrogenase e1 component
BEN82_RS00270	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BEN82_RS00275	COG2124	cytochrome p450
BEN82_RS00355	COG0134	indole-3-glycerol-phosphate synthase activity
BEN82_RS00360	COG0135	phosphoribosylanthranilate isomerase activity
BEN82_RS00370	COG1960	acyl-CoA dehydrogenase activity
BEN82_RS00375	COG0662	Cupin 2, conserved barrel domain protein
BEN82_RS00380	COG0159	tryptophan synthase activity
BEN82_RS00385	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BEN82_RS00395	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BEN82_RS00405	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BEN82_RS00410	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BEN82_RS00430	COG3321	synthase
BEN82_RS00430	COG1028	Short-chain dehydrogenase reductase Sdr
BEN82_RS00430	COG0604	alcohol dehydrogenase
BEN82_RS00435	COG0702	epimerase
BEN82_RS00460	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
BEN82_RS00510	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BEN82_RS00515	COG2890	protein-(glutamine-N5) methyltransferase activity
BEN82_RS00520	COG0702	epimerase
BEN82_RS00540	COG1250	3-hydroxyacyl-CoA dehydrogenase
BEN82_RS00545	COG3246	L-lysine catabolic process to acetate
BEN82_RS00575	COG0477	Major facilitator Superfamily
BEN82_RS00600	COG4335	DNA alkylation repair
BEN82_RS00610	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BEN82_RS00610	COG0300	oxidoreductase activity
BEN82_RS00610	COG3321	synthase
BEN82_RS00610	COG4221	oxidoreductase activity
BEN82_RS00615	COG3321	synthase
BEN82_RS00615	COG0604	alcohol dehydrogenase
BEN82_RS00660	COG1404	Belongs to the peptidase S8 family
BEN82_RS00690	COG0515	serine threonine protein kinase
BEN82_RS00740	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BEN82_RS00750	COG0604	alcohol dehydrogenase
BEN82_RS00765	COG3396	Phenylacetate-CoA oxygenase
BEN82_RS00775	COG3396	Phenylacetate-CoA oxygenase
BEN82_RS00780	COG2151	metal-sulfur cluster biosynthetic enzyme
BEN82_RS00785	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BEN82_RS00790	COG1028	Short-chain dehydrogenase reductase Sdr
BEN82_RS00795	COG3483	tryptophan 2,3-dioxygenase activity
BEN82_RS00825	COG1129	ABC transporter
BEN82_RS00835	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BEN82_RS00870	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BEN82_RS00875	COG2124	cytochrome p450
BEN82_RS00895	COG3321	synthase
BEN82_RS00895	COG0604	alcohol dehydrogenase
BEN82_RS00910	COG3321	synthase
BEN82_RS00910	COG0604	alcohol dehydrogenase
BEN82_RS00925	COG0604	alcohol dehydrogenase
BEN82_RS00925	COG3321	synthase
BEN82_RS00965	COG0142	geranyltranstransferase activity
BEN82_RS00975	COG1028	Short-chain dehydrogenase reductase Sdr
BEN82_RS01025	COG2814	Major facilitator Superfamily
BEN82_RS01035	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BEN82_RS01040	COG0277	FAD linked oxidase domain protein
BEN82_RS01065	COG2318	DinB family
BEN82_RS01070	COG3570	aminoglycoside hydroxyurea antibiotic resistance kinase
BEN82_RS01080	COG4608	Belongs to the ABC transporter superfamily
BEN82_RS01085	COG0444	Belongs to the ABC transporter superfamily
BEN82_RS01090	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BEN82_RS01095	COG0601	transmembrane transport
BEN82_RS01105	COG1960	acyl-CoA dehydrogenase activity
BEN82_RS01110	COG1960	acyl-CoA dehydrogenase activity
BEN82_RS01135	COG0517	IMP dehydrogenase activity
BEN82_RS01135	COG1125	glycine betaine transport
BEN82_RS01145	COG1174	glycine betaine transport
BEN82_RS01150	COG1174	glycine betaine transport
BEN82_RS01155	COG2124	cytochrome p450
BEN82_RS01170	COG1028	Short-chain dehydrogenase reductase Sdr
BEN82_RS01185	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BEN82_RS01190	COG4608	Belongs to the ABC transporter superfamily
BEN82_RS01200	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BEN82_RS01230	COG0235	Class ii aldolase
BEN82_RS01235	COG3395	kinase activity
BEN82_RS01250	COG1349	DNA-binding transcription factor activity
BEN82_RS01270	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BEN82_RS01280	COG3971	2-oxopent-4-enoate hydratase activity
BEN82_RS01285	COG1414	Transcriptional regulator
BEN82_RS01310	COG0242	peptide deformylase activity
BEN82_RS01325	COG0110	maltose O-acetyltransferase activity
BEN82_RS01335	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BEN82_RS01340	COG1132	(ABC) transporter
BEN82_RS01345	COG1132	(ABC) transporter
BEN82_RS01370	COG1120	ATPase activity
BEN82_RS01380	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BEN82_RS01410	COG1984	allophanate hydrolase subunit 2
BEN82_RS01415	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BEN82_RS01420	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
BEN82_RS01455	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BEN82_RS01465	COG0300	oxidoreductase activity
BEN82_RS01470	COG2201	protein-glutamate methylesterase activity
BEN82_RS01500	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BEN82_RS01505	COG0590	tRNA wobble adenosine to inosine editing
BEN82_RS01510	COG1121	(ABC) transporter
BEN82_RS01515	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BEN82_RS01525	COG0803	Belongs to the bacterial solute-binding protein 9 family
BEN82_RS01535	COG4257	antibiotic catabolic process
BEN82_RS01545	COG3655	Transcriptional regulator
BEN82_RS01565	COG0464	growth
BEN82_RS01635	COG4948	Mandelate Racemase Muconate Lactonizing
BEN82_RS01640	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BEN82_RS01655	COG3119	arylsulfatase activity
BEN82_RS01685	COG0477	Major facilitator Superfamily
BEN82_RS01715	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BEN82_RS01720	COG0227	Belongs to the bacterial ribosomal protein bL28 family
BEN82_RS01725	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BEN82_RS01730	COG0254	rRNA binding
BEN82_RS01740	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BEN82_RS01765	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
BEN82_RS01795	COG0142	geranyltranstransferase activity
BEN82_RS01800	COG1796	DNA polymerase
BEN82_RS01800	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BEN82_RS01810	COG2837	iron assimilation
BEN82_RS01830	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BEN82_RS01835	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BEN82_RS01855	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BEN82_RS01860	COG0121	glutamine amidotransferase
BEN82_RS01865	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
BEN82_RS01870	COG2182	Extracellular solute-binding protein
BEN82_RS01875	COG3360	Dodecin
BEN82_RS01885	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BEN82_RS01890	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BEN82_RS01895	COG1053	succinate dehydrogenase
BEN82_RS01905	COG0583	DNA-binding transcription factor activity
BEN82_RS01970	COG3275	phosphorelay sensor kinase activity
BEN82_RS01975	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BEN82_RS01985	COG3279	Response regulator of the LytR AlgR family
BEN82_RS01990	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
BEN82_RS02020	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BEN82_RS02025	COG3693	PFAM glycoside hydrolase, family 10
BEN82_RS02045	COG1132	(ABC) transporter
BEN82_RS02055	COG1595	DNA-templated transcription, initiation
BEN82_RS02065	COG0656	L-ascorbic acid biosynthetic process
BEN82_RS02085	COG0784	Response regulator, receiver
BEN82_RS02090	COG4251	negative regulation of phosphorylation
BEN82_RS02135	COG0501	Belongs to the peptidase M48B family
BEN82_RS02140	COG2723	6-phospho-beta-galactosidase activity
BEN82_RS02145	COG0395	ABC-type sugar transport system, permease component
BEN82_RS02150	COG1175	transmembrane transport
BEN82_RS02175	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BEN82_RS02195	COG1960	acyl-CoA dehydrogenase activity
BEN82_RS02205	COG0242	peptide deformylase activity
BEN82_RS02215	COG3442	glutamine amidotransferase
BEN82_RS02220	COG0205	6-phosphofructokinase activity
BEN82_RS02230	COG2208	phosphoserine phosphatase activity
BEN82_RS02230	COG2770	Histidine kinase
BEN82_RS02240	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
BEN82_RS02240	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
BEN82_RS02245	COG0435	Glutathione S-transferase
BEN82_RS02255	COG2175	clavaminate synthase activity
BEN82_RS02270	COG1132	(ABC) transporter
BEN82_RS02300	COG0204	Acyl-transferase
BEN82_RS02305	COG4552	Acetyltransferase involved in intracellular survival and related
BEN82_RS02310	COG0829	nickel cation binding
BEN82_RS02315	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
BEN82_RS02325	COG0804	urea catabolic process
BEN82_RS02330	COG0832	Belongs to the urease beta subunit family
BEN82_RS02335	COG0831	urea catabolic process
BEN82_RS02345	COG0740	serine-type endopeptidase activity
BEN82_RS02350	COG0791	NLP P60 protein
BEN82_RS02375	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
BEN82_RS02380	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BEN82_RS02385	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
BEN82_RS02395	COG0488	(ABC) transporter
BEN82_RS02400	COG0488	(ABC) transporter
BEN82_RS02405	COG0456	acetyltransferase
BEN82_RS02425	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BEN82_RS02430	COG3663	DNA glycosylase
BEN82_RS02445	COG1940	carbohydrate kinase activity
BEN82_RS02450	COG2188	Transcriptional regulator
BEN82_RS02475	COG0626	cystathionine gamma-synthase activity
BEN82_RS02490	COG1028	Short-chain dehydrogenase reductase Sdr
BEN82_RS02500	COG1522	sequence-specific DNA binding
BEN82_RS02505	COG0419	ATPase involved in DNA repair
BEN82_RS02510	COG0420	3'-5' exonuclease activity
BEN82_RS02525	COG1595	DNA-templated transcription, initiation
BEN82_RS02545	COG1739	Uncharacterized protein family UPF0029
BEN82_RS02550	COG1832	CoA-binding protein
BEN82_RS02560	COG0110	maltose O-acetyltransferase activity
BEN82_RS02620	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BEN82_RS02640	COG1968	undecaprenyl-diphosphatase activity
BEN82_RS02650	COG1982	Orn Lys Arg decarboxylase major
BEN82_RS02700	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BEN82_RS02740	COG0154	amidase activity
BEN82_RS02750	COG4251	negative regulation of phosphorylation
BEN82_RS02770	COG0697	spore germination
BEN82_RS02785	COG0697	spore germination
BEN82_RS02805	COG0539	negative regulation of cytoplasmic translation
BEN82_RS02845	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BEN82_RS02845	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BEN82_RS02855	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BEN82_RS02875	COG1716	ATPase activity
BEN82_RS02895	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BEN82_RS02930	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BEN82_RS02940	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BEN82_RS02960	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
BEN82_RS03055	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BEN82_RS03060	COG2364	Membrane
BEN82_RS03070	COG2270	Major facilitator Superfamily
BEN82_RS03080	COG3030	protein affecting phage T7 exclusion by the F plasmid
BEN82_RS03085	COG0463	Glycosyl transferase, family 2
BEN82_RS03105	COG1960	acyl-CoA dehydrogenase activity
BEN82_RS03135	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
BEN82_RS03140	COG0140	phosphoribosyl-ATP diphosphatase activity
BEN82_RS03145	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
BEN82_RS03150	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BEN82_RS03150	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BEN82_RS03155	COG3201	nicotinamide mononucleotide transporter
BEN82_RS03170	COG1090	epimerase
BEN82_RS03175	COG1846	Transcriptional regulator
BEN82_RS03175	COG1940	carbohydrate kinase activity
BEN82_RS03180	COG0738	Major facilitator superfamily
BEN82_RS03190	COG2233	PERMEase
BEN82_RS03195	COG0697	spore germination
BEN82_RS03215	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BEN82_RS03255	COG2390	Transcriptional regulator
BEN82_RS03260	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BEN82_RS03265	COG2318	DinB family
BEN82_RS03280	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BEN82_RS03295	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BEN82_RS03305	COG1758	RNA polymerase activity
BEN82_RS03320	COG0284	orotidine-5'-phosphate decarboxylase activity
BEN82_RS03325	COG0167	dihydroorotate dehydrogenase activity
BEN82_RS03330	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BEN82_RS03335	COG0505	Belongs to the CarA family
BEN82_RS03345	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BEN82_RS03350	COG0540	Belongs to the ATCase OTCase family
BEN82_RS03355	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
BEN82_RS03365	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BEN82_RS03370	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BEN82_RS03375	COG0006	proline dipeptidase activity
BEN82_RS03385	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
BEN82_RS03390	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BEN82_RS03395	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
BEN82_RS03400	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BEN82_RS03405	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BEN82_RS03410	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BEN82_RS03415	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BEN82_RS03430	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
BEN82_RS03445	COG0124	histidyl-tRNA synthetase
BEN82_RS03455	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BEN82_RS03460	COG1196	nuclear chromosome segregation
BEN82_RS03470	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BEN82_RS03475	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BEN82_RS03480	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BEN82_RS03485	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BEN82_RS03495	COG2255	four-way junction helicase activity
BEN82_RS03500	COG0632	four-way junction helicase activity
BEN82_RS03505	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
BEN82_RS03510	COG0217	transcriptional regulatory protein
BEN82_RS03515	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
BEN82_RS03520	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
BEN82_RS03530	COG0438	transferase activity, transferring glycosyl groups
BEN82_RS03535	COG1560	Kdo2-lipid A biosynthetic process
BEN82_RS03540	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BEN82_RS03555	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BEN82_RS03560	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BEN82_RS03615	COG0456	acetyltransferase
BEN82_RS03690	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BEN82_RS03690	COG1648	precorrin-2 dehydrogenase activity
BEN82_RS03695	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
BEN82_RS03710	COG1464	Belongs to the NlpA lipoprotein family
BEN82_RS03715	COG1464	Belongs to the NlpA lipoprotein family
BEN82_RS03720	COG2011	ABC-type metal ion transport system permease component
BEN82_RS03725	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BEN82_RS03730	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BEN82_RS03755	COG0584	glycerophosphoryl diester phosphodiesterase
BEN82_RS03760	COG0204	Acyl-transferase
BEN82_RS03760	COG0318	PFAM AMP-dependent synthetase and ligase
BEN82_RS03765	COG0477	Major facilitator Superfamily
BEN82_RS03785	COG0165	Argininosuccinate lyase
BEN82_RS03795	COG0385	Bile acid
BEN82_RS03800	COG2409	Drug exporters of the RND superfamily
BEN82_RS03810	COG2197	response regulator
BEN82_RS03815	COG4585	Histidine kinase
BEN82_RS03820	COG1438	arginine binding
BEN82_RS03825	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BEN82_RS03830	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BEN82_RS03835	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
BEN82_RS03840	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BEN82_RS03865	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BEN82_RS03875	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BEN82_RS03890	COG1309	transcriptional regulator
BEN82_RS03905	COG2838	Isocitrate dehydrogenase
BEN82_RS03945	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BEN82_RS03950	COG0697	spore germination
BEN82_RS03965	COG1028	Short-chain dehydrogenase reductase Sdr
BEN82_RS03980	COG2249	NAD(P)H dehydrogenase (quinone) activity
BEN82_RS03995	COG0537	adenosine 5'-monophosphoramidase activity
BEN82_RS04015	COG1074	ATP-dependent DNA helicase activity
BEN82_RS04040	COG0072	phenylalanine-tRNA ligase activity
BEN82_RS04040	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BEN82_RS04045	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BEN82_RS04050	COG5002	protein histidine kinase activity
BEN82_RS04055	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BEN82_RS04060	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BEN82_RS04065	COG0291	Belongs to the bacterial ribosomal protein bL35 family
BEN82_RS04070	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BEN82_RS04080	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BEN82_RS04115	COG1012	belongs to the aldehyde dehydrogenase family
BEN82_RS04120	COG0174	glutamine synthetase
BEN82_RS04125	COG2186	Transcriptional regulator
BEN82_RS04130	COG0531	amino acid
BEN82_RS04135	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
BEN82_RS04160	COG4175	Glycine betaine
BEN82_RS04160	COG0517	IMP dehydrogenase activity
BEN82_RS04165	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BEN82_RS04175	COG1595	DNA-templated transcription, initiation
BEN82_RS04185	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BEN82_RS04195	COG0564	pseudouridine synthase activity
BEN82_RS04225	COG2124	cytochrome p450
BEN82_RS04240	COG0805	protein transport
BEN82_RS04245	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BEN82_RS04280	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
BEN82_RS04295	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
BEN82_RS04300	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
BEN82_RS04310	COG4122	O-methyltransferase activity
BEN82_RS04315	COG1222	aaa ATPase
BEN82_RS04335	COG1994	Peptidase M50
BEN82_RS04335	COG0517	IMP dehydrogenase activity
BEN82_RS04345	COG2197	response regulator
BEN82_RS04350	COG0747	negative chemotaxis
BEN82_RS04360	COG0646	methionine synthase
BEN82_RS04360	COG1410	methionine synthase
BEN82_RS04370	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BEN82_RS04375	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BEN82_RS04380	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BEN82_RS04395	COG0215	cysteine-tRNA ligase activity
BEN82_RS04415	COG0598	Magnesium transport protein CorA
BEN82_RS04425	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BEN82_RS04430	COG0667	Aldo Keto reductase
BEN82_RS04460	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BEN82_RS04470	COG3189	MarR family transcriptional regulator
BEN82_RS04475	COG3012	SEC-C Motif Domain Protein
BEN82_RS04485	COG3265	gluconokinase activity
BEN82_RS04525	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
BEN82_RS04530	COG2149	membrane
BEN82_RS04550	COG1960	acyl-CoA dehydrogenase activity
BEN82_RS04560	COG0318	PFAM AMP-dependent synthetase and ligase
BEN82_RS04575	COG0488	(ABC) transporter
BEN82_RS04585	COG3876	Protein conserved in bacteria
BEN82_RS04635	COG1309	transcriptional regulator
BEN82_RS04660	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
BEN82_RS04665	COG2188	Transcriptional regulator
BEN82_RS04670	COG3973	AAA domain
BEN82_RS04690	COG2755	lipolytic protein G-D-S-L family
BEN82_RS04710	COG1216	Glycosyl transferase, family 2
BEN82_RS04780	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BEN82_RS04785	COG0587	DNA-directed DNA polymerase activity
BEN82_RS04800	COG0330	HflC and HflK could
BEN82_RS04820	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BEN82_RS04825	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BEN82_RS04835	COG0765	amino acid transport
BEN82_RS04845	COG0765	amino acid transport
BEN82_RS04860	COG1799	cell septum assembly
BEN82_RS04865	COG0477	Major facilitator Superfamily
BEN82_RS04875	COG0671	phosphoesterase, PA-phosphatase related
BEN82_RS04895	COG0438	transferase activity, transferring glycosyl groups
BEN82_RS04915	COG1160	GTP binding
BEN82_RS04925	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
BEN82_RS04940	COG3541	Predicted nucleotidyltransferase
BEN82_RS04945	COG1397	ADP-ribosylglycohydrolase
BEN82_RS04955	COG1187	pseudouridine synthase activity
BEN82_RS04960	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BEN82_RS04965	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BEN82_RS04980	COG0686	Belongs to the AlaDH PNT family
BEN82_RS04990	COG0494	nUDIX hydrolase
BEN82_RS04995	COG0504	CTP synthase activity
BEN82_RS05000	COG3387	PFAM Glycoside hydrolase 15-related
BEN82_RS05010	COG3896	Chloramphenicol phosphotransferase-like protein
BEN82_RS05030	COG0497	DNA recombination
BEN82_RS05035	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BEN82_RS05055	COG0647	UMP catabolic process
BEN82_RS05090	COG2094	Belongs to the DNA glycosylase MPG family
BEN82_RS05100	COG1881	PFAM PEBP family protein
BEN82_RS05120	COG1119	ATPase activity
BEN82_RS05135	COG2197	response regulator
BEN82_RS05150	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
BEN82_RS05160	COG0842	Transport permease protein
BEN82_RS05160	COG1131	(ABC) transporter
BEN82_RS05160	COG1716	ATPase activity
BEN82_RS05165	COG0560	Phosphoserine phosphatase
BEN82_RS05165	COG3830	Belongs to the UPF0237 family
BEN82_RS05180	COG2807	transmembrane transport
BEN82_RS05185	COG2186	Transcriptional regulator
BEN82_RS05195	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BEN82_RS05205	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BEN82_RS05210	COG2261	transglycosylase associated protein
BEN82_RS05230	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
BEN82_RS05240	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BEN82_RS05245	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BEN82_RS05260	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BEN82_RS05280	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BEN82_RS05325	COG1024	Enoyl-CoA hydratase
BEN82_RS05335	COG0488	(ABC) transporter
BEN82_RS05355	COG0235	Class ii aldolase
BEN82_RS05375	COG1492	cobalamin metabolic process
BEN82_RS05390	COG1797	cobyrinic acid a,c-diamide synthase activity
BEN82_RS05420	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BEN82_RS05425	COG0456	acetyltransferase
BEN82_RS05435	COG1917	Cupin 2, conserved barrel domain protein
BEN82_RS05440	COG5285	phytanoyl-CoA dioxygenase
BEN82_RS05445	COG1902	pentaerythritol trinitrate reductase activity
BEN82_RS05475	COG4585	Histidine kinase
BEN82_RS05480	COG2197	response regulator
BEN82_RS05520	COG2171	N-acyltransferase activity
BEN82_RS05530	COG0822	iron-sulfur transferase activity
BEN82_RS05535	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BEN82_RS05540	COG0396	ATPase activity
BEN82_RS05550	COG0719	Fe-S assembly protein
BEN82_RS05565	COG1131	(ABC) transporter
BEN82_RS05575	COG1612	heme a metabolic process
BEN82_RS05590	COG0109	protoheme IX farnesyltransferase activity
BEN82_RS05595	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BEN82_RS05600	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BEN82_RS05615	COG0363	glucosamine-6-phosphate deaminase activity
BEN82_RS05620	COG0166	Belongs to the GPI family
BEN82_RS05630	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BEN82_RS05635	COG0149	triose-phosphate isomerase activity
BEN82_RS05640	COG0126	phosphoglycerate kinase activity
BEN82_RS05645	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BEN82_RS05650	COG1481	regulation of sporulation
BEN82_RS05660	COG1660	Displays ATPase and GTPase activities
BEN82_RS05665	COG0322	excinuclease ABC activity
BEN82_RS05680	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BEN82_RS05690	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BEN82_RS05695	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
BEN82_RS05715	COG0556	nucleotide-excision repair
BEN82_RS05725	COG0584	glycerophosphoryl diester phosphodiesterase
BEN82_RS05735	COG0477	Major facilitator Superfamily
BEN82_RS05785	COG1288	antiporter activity
BEN82_RS05810	COG0237	dephospho-CoA kinase activity
BEN82_RS05830	COG2226	methyltransferase
BEN82_RS05835	COG1643	Atp-dependent helicase
BEN82_RS05855	COG2050	protein possibly involved in aromatic compounds catabolism
BEN82_RS05860	COG2746	aminoglycoside 3-N-acetyltransferase activity
BEN82_RS05870	COG0559	Belongs to the binding-protein-dependent transport system permease family
BEN82_RS05910	COG0737	Belongs to the 5'-nucleotidase family
BEN82_RS05915	COG3486	L-lysine 6-monooxygenase (NADPH) activity
BEN82_RS05945	COG1605	Chorismate mutase
BEN82_RS05945	COG0287	Prephenate dehydrogenase
BEN82_RS05955	COG0513	Belongs to the DEAD box helicase family
BEN82_RS05960	COG1278	Cold shock
BEN82_RS05975	COG0069	glutamate synthase activity
BEN82_RS05975	COG0070	glutamate synthase
BEN82_RS05975	COG0067	glutamate synthase
BEN82_RS06005	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BEN82_RS06010	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BEN82_RS06020	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BEN82_RS06030	COG0159	tryptophan synthase activity
BEN82_RS06035	COG0133	tryptophan synthase activity
BEN82_RS06040	COG0134	indole-3-glycerol-phosphate synthase activity
BEN82_RS06070	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BEN82_RS06080	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BEN82_RS06085	COG0107	imidazoleglycerol-phosphate synthase activity
BEN82_RS06090	COG0251	oxidation-reduction process
BEN82_RS06095	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
BEN82_RS06100	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BEN82_RS06105	COG0131	Imidazoleglycerol-phosphate dehydratase
BEN82_RS06110	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BEN82_RS06115	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BEN82_RS06130	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BEN82_RS06135	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BEN82_RS06155	COG1432	Conserved Protein
BEN82_RS06160	COG0587	DNA-directed DNA polymerase activity
BEN82_RS06180	COG0515	serine threonine protein kinase
BEN82_RS06195	COG2153	protein acetylation
BEN82_RS06205	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BEN82_RS06215	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BEN82_RS06225	COG3599	regulation of cell shape
BEN82_RS06235	COG1799	cell septum assembly
BEN82_RS06245	COG1496	oxidoreductase activity
BEN82_RS06250	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BEN82_RS06255	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BEN82_RS06260	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BEN82_RS06270	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BEN82_RS06275	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BEN82_RS06285	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BEN82_RS06300	COG0275	rRNA processing
BEN82_RS06310	COG0714	Associated with various cellular activities
BEN82_RS06330	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BEN82_RS06335	COG1129	ABC transporter
BEN82_RS06345	COG1309	transcriptional regulator
BEN82_RS06365	COG0352	thiamine-phosphate diphosphorylase activity
BEN82_RS06375	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BEN82_RS06380	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BEN82_RS06380	COG2022	thiamine diphosphate biosynthetic process
BEN82_RS06390	COG2022	thiamine diphosphate biosynthetic process
BEN82_RS06395	COG2815	serine threonine protein kinase
BEN82_RS06395	COG0515	serine threonine protein kinase
BEN82_RS06400	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
BEN82_RS06405	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BEN82_RS06410	COG2193	ferroxidase activity
BEN82_RS06415	COG0243	molybdopterin cofactor binding
BEN82_RS06420	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
BEN82_RS06435	COG2197	response regulator
BEN82_RS06440	COG4585	Histidine kinase
BEN82_RS06465	COG1940	carbohydrate kinase activity
BEN82_RS06475	COG0003	Pfam Anion-transporting ATPase
BEN82_RS06495	COG0438	transferase activity, transferring glycosyl groups
BEN82_RS06530	COG0705	Rhomboid family
BEN82_RS06545	COG5002	protein histidine kinase activity
BEN82_RS06550	COG0745	RESPONSE REGULATOR receiver
BEN82_RS06560	COG1929	Belongs to the glycerate kinase type-1 family
BEN82_RS06565	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BEN82_RS06570	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BEN82_RS06575	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BEN82_RS06580	COG0723	plastoquinol--plastocyanin reductase activity
BEN82_RS06585	COG2010	Cytochrome c
BEN82_RS06590	COG1845	cytochrome c oxidase, subunit III
BEN82_RS06600	COG1376	ErfK ybiS ycfS ynhG family protein
BEN82_RS06610	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BEN82_RS06615	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BEN82_RS06620	COG1104	cysteine desulfurase activity
BEN82_RS06625	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BEN82_RS06650	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
BEN82_RS06655	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BEN82_RS06660	COG2197	response regulator
BEN82_RS06705	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
BEN82_RS06715	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
BEN82_RS06720	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BEN82_RS06725	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BEN82_RS06730	COG0508	dehydrogenase complex catalyzes the overall conversion of
BEN82_RS06740	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
BEN82_RS06755	COG4221	oxidoreductase activity
BEN82_RS06780	COG0456	acetyltransferase
BEN82_RS06790	COG0321	lipoyl(octanoyl) transferase activity
BEN82_RS06795	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
BEN82_RS06835	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BEN82_RS06845	COG2376	Dihydroxyacetone kinase
BEN82_RS06855	COG2326	polyphosphate kinase activity
BEN82_RS06920	COG1012	belongs to the aldehyde dehydrogenase family
BEN82_RS06950	COG0745	RESPONSE REGULATOR receiver
BEN82_RS06985	COG1309	transcriptional regulator
BEN82_RS07005	COG0366	Alpha amylase catalytic
BEN82_RS07010	COG0395	ABC-type sugar transport system, permease component
BEN82_RS07015	COG1175	transmembrane transport
BEN82_RS07020	COG2182	Extracellular solute-binding protein
BEN82_RS07025	COG1609	Transcriptional regulator
BEN82_RS07040	COG1228	amidohydrolase
BEN82_RS07045	COG0531	amino acid
BEN82_RS07060	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
BEN82_RS07120	COG2188	Transcriptional regulator
BEN82_RS07195	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
BEN82_RS07200	COG0174	glutamine synthetase
BEN82_RS07220	COG2132	Multicopper oxidase
BEN82_RS07225	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BEN82_RS07225	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
BEN82_RS07240	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
BEN82_RS07245	COG1994	Peptidase M50
BEN82_RS07290	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BEN82_RS07295	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BEN82_RS07300	COG1120	ATPase activity
BEN82_RS07320	COG1834	amidinotransferase
BEN82_RS07330	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BEN82_RS07335	COG2814	Major facilitator Superfamily
BEN82_RS07345	COG0076	glutamate decarboxylase activity
BEN82_RS07365	COG0384	phenazine biosynthesis protein PhzF
BEN82_RS07370	COG2226	methyltransferase
BEN82_RS07390	COG1733	regulation of RNA biosynthetic process
BEN82_RS07430	COG3022	response to hydroperoxide
BEN82_RS07435	COG0800	Aldolase
BEN82_RS07455	COG1131	(ABC) transporter
BEN82_RS07465	COG4585	Histidine kinase
BEN82_RS07470	COG0346	lactoylglutathione lyase activity
BEN82_RS07475	COG2197	response regulator
BEN82_RS07490	COG1960	acyl-CoA dehydrogenase activity
BEN82_RS07495	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BEN82_RS07500	COG0477	Major facilitator Superfamily
BEN82_RS07530	COG0438	transferase activity, transferring glycosyl groups
BEN82_RS07535	COG1657	PFAM Prenyltransferase squalene oxidase
BEN82_RS07550	COG3845	ABC transporter
BEN82_RS07655	COG0586	Pfam SNARE associated Golgi protein
BEN82_RS07670	COG1358	cellular component organization or biogenesis
BEN82_RS07715	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
BEN82_RS07735	COG4585	Histidine kinase
BEN82_RS07740	COG2197	response regulator
BEN82_RS07755	COG0667	Aldo Keto reductase
BEN82_RS07760	COG0789	Transcriptional regulator
BEN82_RS07775	COG1741	Belongs to the pirin family
BEN82_RS07790	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BEN82_RS07795	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BEN82_RS07800	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BEN82_RS07830	COG1764	response to oxidative stress
BEN82_RS07835	COG2130	NADP-dependent
BEN82_RS07860	COG1077	Cell shape determining protein MreB Mrl
BEN82_RS07875	COG2890	protein-(glutamine-N5) methyltransferase activity
BEN82_RS07890	COG1028	Short-chain dehydrogenase reductase Sdr
BEN82_RS07915	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BEN82_RS07940	COG0232	Belongs to the dGTPase family. Type 2 subfamily
BEN82_RS07950	COG2851	Citrate transporter
BEN82_RS07955	COG4565	transcriptional regulatory protein
BEN82_RS07960	COG3290	protein histidine kinase activity
BEN82_RS07970	COG0358	DNA primase activity
BEN82_RS07975	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BEN82_RS07995	COG1070	Carbohydrate kinase
BEN82_RS08035	COG2226	methyltransferase
BEN82_RS08045	COG1028	Short-chain dehydrogenase reductase Sdr
BEN82_RS08060	COG0832	Belongs to the urease beta subunit family
BEN82_RS08065	COG0804	urea catabolic process
BEN82_RS08070	COG0830	nickel cation binding
BEN82_RS08075	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
BEN82_RS08080	COG0829	nickel cation binding
BEN82_RS08090	COG1324	tolerance protein
BEN82_RS08105	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BEN82_RS08105	COG0574	Belongs to the PEP-utilizing enzyme family
BEN82_RS08110	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
BEN82_RS08115	COG1846	Transcriptional regulator
BEN82_RS08115	COG1940	carbohydrate kinase activity
BEN82_RS08120	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
BEN82_RS08135	COG1181	Belongs to the D-alanine--D-alanine ligase family
BEN82_RS08145	COG3467	pyridoxamine 5'-phosphate
BEN82_RS08155	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
BEN82_RS08160	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BEN82_RS08175	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BEN82_RS08185	COG0189	ligase activity
BEN82_RS08225	COG0423	glycine-tRNA ligase activity
BEN82_RS08235	COG1121	(ABC) transporter
BEN82_RS08240	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BEN82_RS08250	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BEN82_RS08255	COG1381	Involved in DNA repair and RecF pathway recombination
BEN82_RS08270	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BEN82_RS08285	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BEN82_RS08295	COG2315	Protein conserved in bacteria
BEN82_RS08305	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BEN82_RS08330	COG1486	melibiose metabolic process
BEN82_RS08355	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BEN82_RS08360	COG2515	1-aminocyclopropane-1-carboxylate deaminase
BEN82_RS08380	COG1234	tRNA 3'-trailer cleavage
BEN82_RS08385	COG0537	adenosine 5'-monophosphoramidase activity
BEN82_RS08390	COG0793	Belongs to the peptidase S41A family
BEN82_RS08390	COG4946	Tricorn protease homolog
BEN82_RS08405	COG0484	heat shock protein binding
BEN82_RS08440	COG0481	GTPase activity
BEN82_RS08445	COG0268	Binds directly to 16S ribosomal RNA
BEN82_RS08460	COG2353	YceI-like domain
BEN82_RS08475	COG1555	photosystem II stabilization
BEN82_RS08480	COG1307	EDD domain protein, DegV family
BEN82_RS08490	COG0495	leucyl-tRNA aminoacylation
BEN82_RS08515	COG0588	phosphoglycerate mutase activity
BEN82_RS08520	COG0799	negative regulation of ribosome biogenesis
BEN82_RS08530	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BEN82_RS08535	COG0501	Belongs to the peptidase M48B family
BEN82_RS08555	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BEN82_RS08565	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BEN82_RS08585	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BEN82_RS08590	COG0211	Belongs to the bacterial ribosomal protein bL27 family
BEN82_RS08595	COG0261	This protein binds to 23S rRNA in the presence of protein L20
BEN82_RS08600	COG1530	ribonuclease E activity
BEN82_RS08630	COG0772	Belongs to the SEDS family
BEN82_RS08650	COG1077	Cell shape determining protein MreB Mrl
BEN82_RS08655	COG0105	UTP biosynthetic process
BEN82_RS08665	COG0285	dihydrofolate synthase activity
BEN82_RS08670	COG0525	valine-tRNA ligase activity
BEN82_RS08680	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BEN82_RS08685	COG0740	serine-type endopeptidase activity
BEN82_RS08690	COG0740	serine-type endopeptidase activity
BEN82_RS08695	COG0544	peptidyl-prolyl cis-trans isomerase activity
BEN82_RS08715	COG3594	Acyltransferase
BEN82_RS08720	COG0475	glutathione-regulated potassium exporter activity
BEN82_RS08740	COG1113	amino acid transport
BEN82_RS08745	COG1268	BioY protein
BEN82_RS08750	COG1113	amino acid transport
BEN82_RS08755	COG1113	amino acid transport
BEN82_RS08760	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BEN82_RS08770	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
BEN82_RS08805	COG4266	Belongs to the allantoicase family
BEN82_RS08835	COG0583	DNA-binding transcription factor activity
BEN82_RS08855	COG3525	Glycosyl hydrolase, family 20, catalytic domain
BEN82_RS08870	COG0668	transmembrane transport
BEN82_RS08880	COG1486	melibiose metabolic process
BEN82_RS08900	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BEN82_RS08935	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BEN82_RS08940	COG0667	Aldo Keto reductase
BEN82_RS08960	COG1136	(ABC) transporter
BEN82_RS08995	COG0629	single-stranded DNA binding
BEN82_RS09065	COG3629	intracellular signal transduction
BEN82_RS09065	COG3903	Transcriptional regulator
BEN82_RS09095	COG1131	(ABC) transporter
BEN82_RS09110	COG3962	Belongs to the TPP enzyme family
BEN82_RS09115	COG3718	enzyme involved in inositol metabolism
BEN82_RS09160	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BEN82_RS09165	COG1472	Belongs to the glycosyl hydrolase 3 family
BEN82_RS09185	COG3960	tartronate-semialdehyde synthase activity
BEN82_RS09195	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BEN82_RS09235	COG1946	Acyl-CoA thioesterase
BEN82_RS09245	COG1309	transcriptional regulator
BEN82_RS09250	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BEN82_RS09265	COG1960	acyl-CoA dehydrogenase activity
BEN82_RS09300	COG3655	Transcriptional regulator
BEN82_RS09310	COG1028	Short-chain dehydrogenase reductase Sdr
BEN82_RS09340	COG3486	L-lysine 6-monooxygenase (NADPH) activity
BEN82_RS09365	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BEN82_RS09380	COG4977	sequence-specific DNA binding
BEN82_RS09385	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
BEN82_RS09435	COG2985	domain, Protein
BEN82_RS09450	COG0745	RESPONSE REGULATOR receiver
BEN82_RS09505	COG0709	Synthesizes selenophosphate from selenide and ATP
BEN82_RS09535	COG0012	GTP binding
BEN82_RS09550	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
BEN82_RS09555	COG0531	amino acid
BEN82_RS09560	COG1570	exodeoxyribonuclease VII activity
BEN82_RS09565	COG1722	exodeoxyribonuclease VII activity
BEN82_RS09570	COG0778	Nitroreductase
BEN82_RS09595	COG0515	serine threonine protein kinase
BEN82_RS09610	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
BEN82_RS09610	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
BEN82_RS09625	COG0114	fumarate hydratase activity
BEN82_RS09635	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BEN82_RS09650	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BEN82_RS09670	COG1136	(ABC) transporter
BEN82_RS09680	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BEN82_RS09685	COG0450	alkyl hydroperoxide reductase
BEN82_RS09705	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BEN82_RS09710	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BEN82_RS09715	COG0667	Aldo Keto reductase
BEN82_RS09730	COG3548	integral membrane protein
BEN82_RS09740	COG2304	oxidoreductase activity
BEN82_RS09745	COG0656	L-ascorbic acid biosynthetic process
BEN82_RS09750	COG2814	Major facilitator Superfamily
BEN82_RS09815	COG2894	cell division
BEN82_RS09850	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BEN82_RS09920	COG0251	oxidation-reduction process
BEN82_RS09925	COG1414	Transcriptional regulator
BEN82_RS09940	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
BEN82_RS09970	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
BEN82_RS09990	COG1331	Highly conserved protein containing a thioredoxin domain
BEN82_RS10010	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BEN82_RS10045	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BEN82_RS10055	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BEN82_RS10070	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BEN82_RS10075	COG2255	four-way junction helicase activity
BEN82_RS10100	COG2318	DinB family
BEN82_RS10105	COG1064	alcohol dehydrogenase
BEN82_RS10110	COG1136	(ABC) transporter
BEN82_RS10130	COG2986	histidine ammonia-lyase
BEN82_RS10140	COG1024	Enoyl-CoA hydratase
BEN82_RS10145	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
BEN82_RS10155	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BEN82_RS10165	COG0424	maF-like protein
BEN82_RS10175	COG4770	biotin carboxylase activity
BEN82_RS10210	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BEN82_RS10230	COG1012	belongs to the aldehyde dehydrogenase family
BEN82_RS10275	COG1595	DNA-templated transcription, initiation
BEN82_RS10280	COG0745	RESPONSE REGULATOR receiver
BEN82_RS10285	COG2205	protein histidine kinase activity
BEN82_RS10310	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BEN82_RS10335	COG0583	DNA-binding transcription factor activity
BEN82_RS10340	COG2814	Major facilitator Superfamily
BEN82_RS10380	COG1079	Belongs to the binding-protein-dependent transport system permease family
BEN82_RS10385	COG4603	Belongs to the binding-protein-dependent transport system permease family
BEN82_RS10390	COG3845	ABC transporter
BEN82_RS10395	COG1744	ABC transporter substrate-binding protein PnrA-like
BEN82_RS10425	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BEN82_RS10435	COG1473	amidohydrolase
BEN82_RS10435	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
BEN82_RS10445	COG2089	acid synthase
BEN82_RS10450	COG1083	cytidylyl-transferase
BEN82_RS10460	COG1216	Glycosyl transferase, family 2
BEN82_RS10530	COG1595	DNA-templated transcription, initiation
BEN82_RS10535	COG1215	transferase activity, transferring glycosyl groups
BEN82_RS10575	COG2009	succinate dehydrogenase
BEN82_RS10585	COG1053	succinate dehydrogenase
BEN82_RS10590	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BEN82_RS10605	COG1309	transcriptional regulator
BEN82_RS10625	COG1408	metallophosphoesterase
BEN82_RS10640	COG1295	ribonuclease BN
BEN82_RS10680	COG0180	Tryptophanyl-tRNA synthetase
BEN82_RS10715	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BEN82_RS10725	COG0754	glutathionylspermidine amidase activity
BEN82_RS10735	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BEN82_RS10740	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BEN82_RS10750	COG1609	Transcriptional regulator
BEN82_RS10755	COG2362	D-Aminopeptidase
BEN82_RS10775	COG1175	transmembrane transport
BEN82_RS10780	COG0395	ABC-type sugar transport system, permease component
BEN82_RS10810	COG4175	Glycine betaine
BEN82_RS10810	COG0517	IMP dehydrogenase activity
BEN82_RS10820	COG1012	belongs to the aldehyde dehydrogenase family
BEN82_RS10840	COG0039	L-malate dehydrogenase activity
BEN82_RS10860	COG2197	response regulator
BEN82_RS10875	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BEN82_RS10885	COG0138	bifunctional purine biosynthesis protein purh
BEN82_RS10915	COG0045	succinate-CoA ligase (ADP-forming) activity
BEN82_RS10920	COG3552	Protein containing von Willebrand factor type A (VWA) domain
BEN82_RS10925	COG2425	protein containing a von Willebrand factor type A (vWA) domain
BEN82_RS10930	COG0714	Associated with various cellular activities
BEN82_RS10945	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BEN82_RS10945	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BEN82_RS10950	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
BEN82_RS10955	COG1196	nuclear chromosome segregation
BEN82_RS10955	COG0741	lytic transglycosylase activity
BEN82_RS10955	COG0739	heme binding
BEN82_RS10960	COG2066	Belongs to the glutaminase family
BEN82_RS11005	COG0791	NLP P60 protein
BEN82_RS11025	COG1228	amidohydrolase
BEN82_RS11035	COG1846	Transcriptional regulator
BEN82_RS11035	COG0456	acetyltransferase
BEN82_RS11080	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BEN82_RS11085	COG2197	response regulator
BEN82_RS11125	COG1028	Short-chain dehydrogenase reductase Sdr
BEN82_RS11135	COG0519	Catalyzes the synthesis of GMP from XMP
BEN82_RS11135	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BEN82_RS11155	COG1012	belongs to the aldehyde dehydrogenase family
BEN82_RS11195	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BEN82_RS11205	COG0516	GMP reductase activity
BEN82_RS11215	COG1595	DNA-templated transcription, initiation
BEN82_RS11220	COG2197	response regulator
BEN82_RS11230	COG0583	DNA-binding transcription factor activity
BEN82_RS11235	COG4221	oxidoreductase activity
BEN82_RS11250	COG0726	polysaccharide deacetylase
BEN82_RS11285	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BEN82_RS11310	COG0802	atpase or kinase
BEN82_RS11315	COG2267	carboxylic ester hydrolase activity
BEN82_RS11320	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BEN82_RS11380	COG0736	holo-[acyl-carrier-protein] synthase activity
BEN82_RS11410	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BEN82_RS11425	COG1072	(Pantothenic acid kinase))
BEN82_RS11430	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BEN82_RS11435	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BEN82_RS11440	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BEN82_RS11450	COG0101	tRNA pseudouridine synthase activity
BEN82_RS11455	COG0203	ribosomal protein L17
BEN82_RS11465	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BEN82_RS11470	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BEN82_RS11475	COG0257	Belongs to the bacterial ribosomal protein bL36 family
BEN82_RS11480	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BEN82_RS11490	COG0563	adenylate kinase activity
BEN82_RS11495	COG0201	protein transport
BEN82_RS11500	COG0200	Binds to the 23S rRNA
BEN82_RS11505	COG1841	ribosomal large subunit assembly
BEN82_RS11510	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BEN82_RS11515	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BEN82_RS11520	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BEN82_RS11525	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BEN82_RS11530	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BEN82_RS11535	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BEN82_RS11540	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BEN82_RS11545	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BEN82_RS11550	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BEN82_RS11555	COG0255	Belongs to the universal ribosomal protein uL29 family
BEN82_RS11560	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BEN82_RS11565	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BEN82_RS11570	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BEN82_RS11575	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BEN82_RS11580	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BEN82_RS11585	COG0089	rRNA binding
BEN82_RS11590	COG0088	Forms part of the polypeptide exit tunnel
BEN82_RS11595	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BEN82_RS11600	COG0051	transcription antitermination factor activity, RNA binding
BEN82_RS11610	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
BEN82_RS11630	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BEN82_RS11635	COG0049	tRNA binding
BEN82_RS11640	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BEN82_RS11675	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BEN82_RS11680	COG0085	RNA polymerase activity
BEN82_RS11685	COG0222	ribosome binding
BEN82_RS11690	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BEN82_RS11700	COG0081	regulation of translation
BEN82_RS11725	COG0436	Aminotransferase
BEN82_RS11730	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BEN82_RS11740	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BEN82_RS11750	COG2030	dehydratase
BEN82_RS11755	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BEN82_RS11770	COG0402	S-adenosylhomocysteine deaminase activity
BEN82_RS11775	COG0702	epimerase
BEN82_RS11790	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BEN82_RS11795	COG2188	Transcriptional regulator
BEN82_RS11885	COG1666	GTP binding
BEN82_RS11890	COG2261	transglycosylase associated protein
BEN82_RS11895	COG3304	Inner membrane component domain
BEN82_RS11900	COG0501	Belongs to the peptidase M48B family
BEN82_RS11905	COG1007	ATP synthesis coupled electron transport
BEN82_RS11915	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BEN82_RS11920	COG0713	ATP synthesis coupled electron transport
BEN82_RS11925	COG0839	Belongs to the complex I subunit 6 family
BEN82_RS11930	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BEN82_RS11935	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
BEN82_RS11940	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BEN82_RS11945	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BEN82_RS11950	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BEN82_RS11960	COG4585	Histidine kinase
BEN82_RS11965	COG2197	response regulator
BEN82_RS11970	COG0674	pyruvate-flavodoxin oxidoreductase activity
BEN82_RS11970	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
BEN82_RS11975	COG1013	pyruvate-flavodoxin oxidoreductase activity
BEN82_RS11980	COG1733	regulation of RNA biosynthetic process
BEN82_RS11985	COG0702	epimerase
BEN82_RS11995	COG0488	(ABC) transporter
BEN82_RS12015	COG0142	geranyltranstransferase activity
BEN82_RS12020	COG3104	oligopeptide transport
BEN82_RS12035	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BEN82_RS12045	COG0561	phosphatase activity
BEN82_RS12065	COG0514	ATP-dependent DNA helicase (RecQ)
BEN82_RS12070	COG1007	ATP synthesis coupled electron transport
BEN82_RS12080	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BEN82_RS12085	COG0713	ATP synthesis coupled electron transport
BEN82_RS12090	COG0839	Belongs to the complex I subunit 6 family
BEN82_RS12095	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BEN82_RS12100	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
BEN82_RS12105	COG1034	ATP synthesis coupled electron transport
BEN82_RS12110	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
BEN82_RS12120	COG0649	NAD binding
BEN82_RS12125	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BEN82_RS12130	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BEN82_RS12155	COG2226	methyltransferase
BEN82_RS12165	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
BEN82_RS12215	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
BEN82_RS12335	COG1427	Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
BEN82_RS12340	COG1278	Cold shock
BEN82_RS12350	COG0183	Belongs to the thiolase family
BEN82_RS12380	COG3559	Exporter of polyketide antibiotics
BEN82_RS12385	COG1131	(ABC) transporter
BEN82_RS12400	COG1301	dicarboxylic acid transport
BEN82_RS12415	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
BEN82_RS12425	COG0163	prenyltransferase activity
BEN82_RS12430	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
BEN82_RS12435	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BEN82_RS12450	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BEN82_RS12460	COG0785	Cytochrome C biogenesis protein
BEN82_RS12465	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BEN82_RS12475	COG0406	alpha-ribazole phosphatase activity
BEN82_RS12480	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
BEN82_RS12525	COG0659	secondary active sulfate transmembrane transporter activity
BEN82_RS12530	COG1690	Belongs to the RtcB family
BEN82_RS12555	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
BEN82_RS12560	COG0018	arginyl-trna synthetase
BEN82_RS12565	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BEN82_RS12595	COG0113	porphobilinogen synthase activity
BEN82_RS12600	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BEN82_RS12600	COG1648	precorrin-2 dehydrogenase activity
BEN82_RS12605	COG0181	hydroxymethylbilane synthase activity
BEN82_RS12610	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
BEN82_RS12615	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
BEN82_RS12640	COG4552	Acetyltransferase involved in intracellular survival and related
BEN82_RS12665	COG0123	including yeast histone deacetylase and acetoin utilization protein
BEN82_RS12700	COG0180	Tryptophanyl-tRNA synthetase
BEN82_RS12705	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BEN82_RS12715	COG1129	ABC transporter
BEN82_RS12715	COG0842	Transport permease protein
BEN82_RS12735	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BEN82_RS12745	COG0129	dihydroxy-acid dehydratase activity
BEN82_RS12755	COG1082	Xylose isomerase domain protein TIM barrel
BEN82_RS12765	COG0248	Ppx GppA phosphatase
BEN82_RS12800	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
BEN82_RS12810	COG0671	phosphoesterase, PA-phosphatase related
BEN82_RS12820	COG1595	DNA-templated transcription, initiation
BEN82_RS12830	COG0745	RESPONSE REGULATOR receiver
BEN82_RS12835	COG2205	protein histidine kinase activity
BEN82_RS12840	COG0739	heme binding
BEN82_RS12865	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
BEN82_RS12885	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
BEN82_RS12895	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BEN82_RS12900	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
BEN82_RS12915	COG2197	response regulator
BEN82_RS12930	COG0649	NAD binding
BEN82_RS12950	COG2197	response regulator
BEN82_RS12955	COG4585	Histidine kinase
BEN82_RS12970	COG1012	belongs to the aldehyde dehydrogenase family
BEN82_RS13050	COG0477	Major facilitator Superfamily
BEN82_RS13060	COG1732	Glycine betaine
BEN82_RS13065	COG1174	glycine betaine transport
BEN82_RS13070	COG1174	glycine betaine transport
BEN82_RS13075	COG1125	glycine betaine transport
BEN82_RS13075	COG0517	IMP dehydrogenase activity
BEN82_RS13090	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BEN82_RS13105	COG0302	gtp cyclohydrolase
BEN82_RS13120	COG0037	tRNA processing
BEN82_RS13130	COG2027	D-alanyl-D-alanine carboxypeptidase
BEN82_RS13135	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
BEN82_RS13145	COG0586	Pfam SNARE associated Golgi protein
BEN82_RS13150	COG0789	Transcriptional regulator
BEN82_RS13155	COG0655	NAD(P)H dehydrogenase (quinone) activity
BEN82_RS13165	COG2318	DinB family
BEN82_RS13170	COG1012	belongs to the aldehyde dehydrogenase family
BEN82_RS13195	COG1289	transmembrane transporter activity
BEN82_RS13235	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BEN82_RS13235	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BEN82_RS13240	COG0501	Belongs to the peptidase M48B family
BEN82_RS13270	COG2186	Transcriptional regulator
BEN82_RS13275	COG2828	Protein conserved in bacteria
BEN82_RS13280	COG2159	amidohydrolase
BEN82_RS13295	COG2814	Major facilitator Superfamily
BEN82_RS13295	COG0477	Major facilitator Superfamily
BEN82_RS13310	COG0739	heme binding
BEN82_RS13340	COG0588	phosphoglycerate mutase activity
BEN82_RS13365	COG0438	transferase activity, transferring glycosyl groups
BEN82_RS13375	COG0791	NLP P60 protein
BEN82_RS13375	COG1388	LysM domain
BEN82_RS13375	COG3103	Sh3 type 3 domain protein
BEN82_RS13400	COG1309	transcriptional regulator
BEN82_RS13420	COG2226	methyltransferase
BEN82_RS13430	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BEN82_RS13480	COG1476	TRANSCRIPTIONal
BEN82_RS13500	COG0789	Transcriptional regulator
BEN82_RS13515	COG1490	D-aminoacyl-tRNA deacylase activity
BEN82_RS13520	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BEN82_RS13525	COG0735	belongs to the Fur family
BEN82_RS13530	COG3485	protocatechuate 3,4-dioxygenase
BEN82_RS13565	COG2897	thiosulfate sulfurtransferase activity
BEN82_RS13590	COG0745	RESPONSE REGULATOR receiver
BEN82_RS13595	COG1609	Transcriptional regulator
BEN82_RS13600	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BEN82_RS13605	COG0745	RESPONSE REGULATOR receiver
BEN82_RS13620	COG4214	carbohydrate transport
BEN82_RS13625	COG1129	ABC transporter
BEN82_RS13635	COG1609	Transcriptional regulator
BEN82_RS13645	COG2160	L-arabinose isomerase activity
BEN82_RS13650	COG0235	Class ii aldolase
BEN82_RS13655	COG0737	Belongs to the 5'-nucleotidase family
BEN82_RS13660	COG0456	acetyltransferase
BEN82_RS13710	COG4941	Belongs to the sigma-70 factor family
BEN82_RS13715	COG1725	Transcriptional regulator
BEN82_RS13725	COG1131	(ABC) transporter
BEN82_RS13735	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BEN82_RS13760	COG2267	carboxylic ester hydrolase activity
BEN82_RS13815	COG1595	DNA-templated transcription, initiation
BEN82_RS13855	COG3903	Transcriptional regulator
BEN82_RS13855	COG3629	intracellular signal transduction
BEN82_RS13860	COG0596	Alpha beta hydrolase
BEN82_RS13870	COG2770	Histidine kinase
BEN82_RS13870	COG2208	phosphoserine phosphatase activity
BEN82_RS13910	COG2318	DinB family
BEN82_RS13915	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BEN82_RS13945	COG0494	nUDIX hydrolase
BEN82_RS13945	COG0406	alpha-ribazole phosphatase activity
BEN82_RS13965	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BEN82_RS13970	COG0306	phosphate transporter
BEN82_RS13980	COG1937	Protein conserved in bacteria
BEN82_RS13990	COG1028	Short-chain dehydrogenase reductase Sdr
BEN82_RS14000	COG0671	phosphoesterase, PA-phosphatase related
BEN82_RS14005	COG0741	lytic transglycosylase activity
BEN82_RS14005	COG0739	heme binding
BEN82_RS14005	COG1196	nuclear chromosome segregation
BEN82_RS14025	COG2318	DinB family
BEN82_RS14035	COG0509	glycine decarboxylation via glycine cleavage system
BEN82_RS14085	COG0477	Major facilitator Superfamily
BEN82_RS14090	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BEN82_RS14095	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BEN82_RS14100	COG2124	cytochrome p450
BEN82_RS14105	COG2267	carboxylic ester hydrolase activity
BEN82_RS14120	COG0798	PFAM Bile acid sodium symporter
BEN82_RS14125	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BEN82_RS14140	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BEN82_RS14155	COG1335	isochorismatase
BEN82_RS14165	COG2197	response regulator
BEN82_RS14170	COG4585	Histidine kinase
BEN82_RS14175	COG0702	epimerase
BEN82_RS14185	COG3844	kynureninase activity
BEN82_RS14205	COG0477	Major facilitator Superfamily
BEN82_RS14210	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BEN82_RS14215	COG0191	fructose-bisphosphate aldolase activity
BEN82_RS14220	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BEN82_RS14235	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BEN82_RS14265	COG2378	regulation of single-species biofilm formation
BEN82_RS14280	COG0477	Major facilitator Superfamily
BEN82_RS14305	COG0789	Transcriptional regulator
BEN82_RS14310	COG0484	heat shock protein binding
BEN82_RS14315	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BEN82_RS14320	COG0443	Heat shock 70 kDa protein
BEN82_RS14355	COG1725	Transcriptional regulator
BEN82_RS14360	COG1131	(ABC) transporter
BEN82_RS14370	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BEN82_RS14400	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
BEN82_RS14405	COG1404	Belongs to the peptidase S8 family
BEN82_RS14410	COG1120	ATPase activity
BEN82_RS14415	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BEN82_RS14420	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BEN82_RS14455	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BEN82_RS14455	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BEN82_RS14485	COG1695	Transcriptional regulator
BEN82_RS14495	COG2814	Major facilitator Superfamily
BEN82_RS14525	COG0717	Belongs to the dCTP deaminase family
BEN82_RS14555	COG2181	nitrate reductase activity
BEN82_RS14555	COG0247	lactate metabolic process
BEN82_RS14585	COG0477	Major facilitator Superfamily
BEN82_RS14605	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BEN82_RS14635	COG2208	phosphoserine phosphatase activity
BEN82_RS14635	COG2770	Histidine kinase
BEN82_RS14640	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
BEN82_RS14645	COG1937	Protein conserved in bacteria
BEN82_RS14650	COG2268	Band 7 protein
BEN82_RS14665	COG1316	TRANSCRIPTIONal
BEN82_RS14705	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BEN82_RS14715	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
BEN82_RS14725	COG0628	permease
BEN82_RS14730	COG1741	Belongs to the pirin family
BEN82_RS14740	COG1960	acyl-CoA dehydrogenase activity
BEN82_RS14760	COG1362	aminopeptidase activity
BEN82_RS14815	COG0508	dehydrogenase complex catalyzes the overall conversion of
BEN82_RS14820	COG0022	dehydrogenase e1 component
BEN82_RS14835	COG0515	serine threonine protein kinase
BEN82_RS14840	COG0515	serine threonine protein kinase
BEN82_RS14865	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BEN82_RS14870	COG0303	'Molybdopterin
BEN82_RS14875	COG0746	molybdenum cofactor guanylyltransferase activity
BEN82_RS14895	COG1522	sequence-specific DNA binding
BEN82_RS14935	COG1733	regulation of RNA biosynthetic process
BEN82_RS14940	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BEN82_RS14950	COG1716	ATPase activity
BEN82_RS14955	COG1716	ATPase activity
BEN82_RS14975	COG0515	serine threonine protein kinase
BEN82_RS14980	COG3764	Sortase (surface protein transpeptidase)
BEN82_RS14985	COG3764	Sortase (surface protein transpeptidase)
BEN82_RS15005	COG0705	Rhomboid family
BEN82_RS15025	COG1309	transcriptional regulator
BEN82_RS15040	COG0515	serine threonine protein kinase
BEN82_RS15075	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BEN82_RS15080	COG0187	DNA topoisomerase II activity
BEN82_RS15085	COG5512	Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives
BEN82_RS15090	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BEN82_RS15095	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
BEN82_RS15100	COG0592	DNA-directed DNA polymerase activity
BEN82_RS15105	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BEN82_RS15110	COG0706	membrane insertase activity
BEN82_RS15120	COG0357	Ribosomal RNA small subunit methyltransferase G
BEN82_RS15125	COG1192	Involved in chromosome partitioning
BEN82_RS15140	COG3118	belongs to the thioredoxin family
BEN82_RS15145	COG0492	ferredoxin-NADP+ reductase activity
BEN82_RS15155	COG1595	DNA-templated transcription, initiation
BEN82_RS15160	COG2815	serine threonine protein kinase
BEN82_RS15160	COG0515	serine threonine protein kinase
BEN82_RS15175	COG0617	tRNA 3'-terminal CCA addition
BEN82_RS15200	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BEN82_RS15225	COG0360	Binds together with S18 to 16S ribosomal RNA
BEN82_RS15230	COG0629	single-stranded DNA binding
BEN82_RS15235	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BEN82_RS15240	COG0359	binds to the 23S rRNA
BEN82_RS15250	COG0305	Participates in initiation and elongation during chromosome replication
BEN82_RS15275	COG1196	nuclear chromosome segregation
BEN82_RS15285	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BEN82_RS15290	COG0110	maltose O-acetyltransferase activity
BEN82_RS15335	COG0626	cystathionine gamma-synthase activity
BEN82_RS15340	COG1950	PFAM Membrane protein of
BEN82_RS15345	COG0662	Cupin 2, conserved barrel domain protein
BEN82_RS15370	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
BEN82_RS15385	COG1609	Transcriptional regulator
BEN82_RS15390	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BEN82_RS15395	COG1271	oxidase subunit
BEN82_RS15400	COG1294	oxidase, subunit
BEN82_RS15405	COG4988	ABC transporter
BEN82_RS15415	COG0739	heme binding
BEN82_RS15415	COG1196	nuclear chromosome segregation
BEN82_RS15415	COG0741	lytic transglycosylase activity
BEN82_RS15420	COG0561	phosphatase activity
BEN82_RS15440	COG1131	(ABC) transporter
BEN82_RS15460	COG0561	phosphatase activity
BEN82_RS15465	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
BEN82_RS15470	COG0077	Prephenate dehydratase
BEN82_RS15475	COG2837	iron assimilation
BEN82_RS15490	COG1999	signal sequence binding
BEN82_RS15510	COG0006	proline dipeptidase activity
BEN82_RS15525	COG0653	protein targeting
BEN82_RS15540	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BEN82_RS15560	COG1595	DNA-templated transcription, initiation
BEN82_RS15565	COG0318	PFAM AMP-dependent synthetase and ligase
BEN82_RS15600	COG0745	RESPONSE REGULATOR receiver
BEN82_RS15610	COG0477	Major facilitator Superfamily
BEN82_RS15630	COG0477	Major facilitator Superfamily
BEN82_RS15640	COG1191	sigma factor activity
BEN82_RS15645	COG1191	sigma factor activity
BEN82_RS15675	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BEN82_RS15740	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BEN82_RS15745	COG2837	iron assimilation
BEN82_RS15755	COG0659	secondary active sulfate transmembrane transporter activity
BEN82_RS15780	COG0151	Belongs to the GarS family
BEN82_RS15795	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
BEN82_RS15805	COG2197	response regulator
BEN82_RS15840	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BEN82_RS15845	COG0047	phosphoribosylformylglycinamidine synthase activity
BEN82_RS15850	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BEN82_RS15865	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
BEN82_RS15900	COG1643	Atp-dependent helicase
BEN82_RS15935	COG0513	Belongs to the DEAD box helicase family
BEN82_RS15965	COG0542	response to heat
BEN82_RS15995	COG0667	Aldo Keto reductase
BEN82_RS16005	COG0220	tRNA (guanine-N7-)-methyltransferase activity
BEN82_RS16010	COG0579	oxidoreductase
BEN82_RS16025	COG1470	cell adhesion involved in biofilm formation
BEN82_RS16025	COG0366	Alpha amylase catalytic
BEN82_RS16105	COG0596	Alpha beta hydrolase
BEN82_RS16120	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BEN82_RS16165	COG2197	response regulator
BEN82_RS16180	COG0666	response to abiotic stimulus
BEN82_RS16190	COG1733	regulation of RNA biosynthetic process
BEN82_RS16250	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BEN82_RS16255	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BEN82_RS16300	COG2130	NADP-dependent
BEN82_RS16320	COG0596	Alpha beta hydrolase
BEN82_RS16345	COG2318	DinB family
BEN82_RS16360	COG0577	efflux transmembrane transporter activity
BEN82_RS16360	COG1136	(ABC) transporter
BEN82_RS16450	COG1408	metallophosphoesterase
BEN82_RS16470	COG0003	Pfam Anion-transporting ATPase
BEN82_RS16480	COG0251	oxidation-reduction process
BEN82_RS16490	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BEN82_RS16520	COG2267	carboxylic ester hydrolase activity
BEN82_RS16530	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
BEN82_RS16535	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BEN82_RS16540	COG0659	secondary active sulfate transmembrane transporter activity
BEN82_RS16600	COG1205	dead DEAH box helicase
BEN82_RS16600	COG1111	helicase
BEN82_RS16605	COG1366	Belongs to the anti-sigma-factor antagonist family
BEN82_RS16620	COG2890	protein-(glutamine-N5) methyltransferase activity
BEN82_RS16630	COG1754	DNA topoisomerase type I activity
BEN82_RS16630	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BEN82_RS16635	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BEN82_RS16665	COG0789	Transcriptional regulator
BEN82_RS16680	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BEN82_RS16685	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BEN82_RS16700	COG0789	Transcriptional regulator
BEN82_RS16710	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
BEN82_RS16710	COG0825	malonyl-CoA metabolic process
BEN82_RS16715	COG0318	PFAM AMP-dependent synthetase and ligase
BEN82_RS16725	COG2186	Transcriptional regulator
BEN82_RS16745	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BEN82_RS16755	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BEN82_RS16765	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BEN82_RS16795	COG1252	NADH dehydrogenase
BEN82_RS16805	COG0640	Transcriptional regulator
BEN82_RS16815	COG1316	TRANSCRIPTIONal
BEN82_RS16820	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BEN82_RS16835	COG0793	Belongs to the peptidase S41A family
BEN82_RS16840	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
BEN82_RS16855	COG5001	Diguanylate cyclase
BEN82_RS16875	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BEN82_RS16880	COG1120	ATPase activity
BEN82_RS16885	COG0783	Belongs to the Dps family
BEN82_RS16920	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BEN82_RS16925	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BEN82_RS16950	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
BEN82_RS16990	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BEN82_RS17070	COG2076	Multidrug Resistance protein
BEN82_RS17080	COG5002	protein histidine kinase activity
BEN82_RS17085	COG0745	RESPONSE REGULATOR receiver
BEN82_RS17095	COG1329	Transcriptional regulator
BEN82_RS17100	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
BEN82_RS17105	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
BEN82_RS17125	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BEN82_RS17140	COG0215	cysteine-tRNA ligase activity
BEN82_RS17155	COG1253	flavin adenine dinucleotide binding
BEN82_RS17165	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BEN82_RS17175	COG3842	ATPase activity
BEN82_RS17185	COG2814	Major facilitator Superfamily
BEN82_RS17230	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BEN82_RS17230	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BEN82_RS17240	COG3486	L-lysine 6-monooxygenase (NADPH) activity
BEN82_RS17250	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BEN82_RS17260	COG0436	Aminotransferase
BEN82_RS17270	COG0456	acetyltransferase
BEN82_RS17305	COG2770	Histidine kinase
BEN82_RS17305	COG2208	phosphoserine phosphatase activity
BEN82_RS17335	COG1278	Cold shock
BEN82_RS17340	COG0513	Belongs to the DEAD box helicase family
BEN82_RS17360	COG0301	tRNA thio-modification
BEN82_RS17380	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BEN82_RS17385	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BEN82_RS17390	COG2197	response regulator
BEN82_RS17395	COG4585	Histidine kinase
BEN82_RS17430	COG1902	pentaerythritol trinitrate reductase activity
BEN82_RS17440	COG0577	efflux transmembrane transporter activity
BEN82_RS17445	COG0577	efflux transmembrane transporter activity
BEN82_RS17445	COG1136	(ABC) transporter
BEN82_RS17470	COG2172	sigma factor antagonist activity
BEN82_RS17475	COG1366	Belongs to the anti-sigma-factor antagonist family
BEN82_RS17480	COG1366	Belongs to the anti-sigma-factor antagonist family
BEN82_RS17560	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BEN82_RS17620	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BEN82_RS17665	COG1063	alcohol dehydrogenase
BEN82_RS17680	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BEN82_RS17705	COG1105	Belongs to the carbohydrate kinase PfkB family
BEN82_RS17745	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BEN82_RS17770	COG0463	Glycosyl transferase, family 2
BEN82_RS17785	COG1278	Cold shock
BEN82_RS17825	COG0667	Aldo Keto reductase
BEN82_RS17830	COG1263	PTS System
BEN82_RS17830	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BEN82_RS17835	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
BEN82_RS17840	COG1737	Transcriptional regulator
BEN82_RS17850	COG0406	alpha-ribazole phosphatase activity
BEN82_RS17915	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BEN82_RS17935	COG2197	response regulator
BEN82_RS17940	COG4585	Histidine kinase
BEN82_RS17995	COG3973	AAA domain
BEN82_RS18065	COG1061	Type III restriction enzyme res subunit
BEN82_RS18120	COG2124	cytochrome p450
BEN82_RS18130	COG1295	ribonuclease BN
BEN82_RS18140	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BEN82_RS18145	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BEN82_RS18150	COG1120	ATPase activity
BEN82_RS18155	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BEN82_RS18160	COG0515	serine threonine protein kinase
BEN82_RS18170	COG1132	(ABC) transporter
BEN82_RS18175	COG1132	(ABC) transporter
BEN82_RS18180	COG2197	response regulator
BEN82_RS18190	COG1278	Cold shock
BEN82_RS18195	COG2107	Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
BEN82_RS18200	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BEN82_RS18210	COG2814	Major facilitator Superfamily
BEN82_RS18235	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BEN82_RS18245	COG2252	PERMEase
BEN82_RS18270	COG0667	Aldo Keto reductase
BEN82_RS18365	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BEN82_RS18375	COG2124	cytochrome p450
BEN82_RS18395	COG2205	protein histidine kinase activity
BEN82_RS18400	COG0277	FAD linked oxidase domain protein
BEN82_RS18400	COG0247	lactate metabolic process
BEN82_RS18410	COG0583	DNA-binding transcription factor activity
BEN82_RS18440	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BEN82_RS18455	COG1024	Enoyl-CoA hydratase
BEN82_RS18475	COG0259	pyridoxamine-phosphate oxidase activity
BEN82_RS18485	COG4821	SIS domain
BEN82_RS18565	COG1366	Belongs to the anti-sigma-factor antagonist family
BEN82_RS18585	COG2271	Major facilitator Superfamily
BEN82_RS18590	COG2072	flavoprotein involved in K transport
BEN82_RS18610	COG1309	transcriptional regulator
BEN82_RS18615	COG0515	serine threonine protein kinase
BEN82_RS18615	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BEN82_RS18650	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BEN82_RS18690	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
BEN82_RS18705	COG0148	phosphopyruvate hydratase activity
BEN82_RS18805	COG1278	Cold shock
BEN82_RS18835	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BEN82_RS18870	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BEN82_RS18875	COG2151	metal-sulfur cluster biosynthetic enzyme
BEN82_RS18880	COG3396	Phenylacetate-CoA oxygenase
BEN82_RS18885	COG3460	Phenylacetate-CoA oxygenase
BEN82_RS18890	COG3396	Phenylacetate-CoA oxygenase
BEN82_RS18895	COG1250	3-hydroxyacyl-CoA dehydrogenase
BEN82_RS18900	COG1024	Enoyl-CoA hydratase
BEN82_RS18905	COG0183	Belongs to the thiolase family
BEN82_RS18915	COG2050	protein possibly involved in aromatic compounds catabolism
BEN82_RS18970	COG1846	Transcriptional regulator
BEN82_RS18975	COG3384	dioxygenase
BEN82_RS18995	COG3191	aminopeptidase activity
BEN82_RS19010	COG1970	mechanosensitive ion channel activity
BEN82_RS19020	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
BEN82_RS19035	COG3263	regulation of cellular component size
BEN82_RS19045	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BEN82_RS19050	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BEN82_RS19060	COG0315	cyclic pyranopterin monophosphate synthase activity
BEN82_RS19065	COG0315	cyclic pyranopterin monophosphate synthase activity
BEN82_RS19065	COG0521	Mo-molybdopterin cofactor biosynthetic process
BEN82_RS19110	COG2197	response regulator
BEN82_RS19130	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BEN82_RS19140	COG0708	Exodeoxyribonuclease III
BEN82_RS19150	COG2072	flavoprotein involved in K transport
BEN82_RS19160	COG4221	oxidoreductase activity
BEN82_RS19170	COG4946	Tricorn protease homolog
BEN82_RS19170	COG0793	Belongs to the peptidase S41A family
BEN82_RS19180	COG2409	Drug exporters of the RND superfamily
BEN82_RS19190	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BEN82_RS19270	COG0084	hydrolase, TatD family'
BEN82_RS19275	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
BEN82_RS19280	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
BEN82_RS19285	COG0488	(ABC) transporter
BEN82_RS19330	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
BEN82_RS19335	COG2197	response regulator
BEN82_RS19345	COG4106	trans-aconitate 2-methyltransferase activity
BEN82_RS19365	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
BEN82_RS19375	COG0193	aminoacyl-tRNA hydrolase activity
BEN82_RS19380	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
BEN82_RS19400	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BEN82_RS19405	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BEN82_RS19415	COG4585	Histidine kinase
BEN82_RS19440	COG0789	Transcriptional regulator
BEN82_RS19460	COG1316	TRANSCRIPTIONal
BEN82_RS19470	COG2267	carboxylic ester hydrolase activity
BEN82_RS19510	COG0477	Major facilitator Superfamily
BEN82_RS19520	COG3629	intracellular signal transduction
BEN82_RS19520	COG3903	Transcriptional regulator
BEN82_RS19575	COG1473	amidohydrolase
BEN82_RS19585	COG3226	Transcriptional regulator
BEN82_RS19590	COG0154	amidase activity
BEN82_RS19630	COG1733	regulation of RNA biosynthetic process
BEN82_RS19685	COG0148	phosphopyruvate hydratase activity
BEN82_RS19715	COG1252	NADH dehydrogenase
BEN82_RS19720	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BEN82_RS19725	COG1136	(ABC) transporter
BEN82_RS19725	COG0577	efflux transmembrane transporter activity
BEN82_RS19730	COG1136	(ABC) transporter
BEN82_RS19750	COG1476	TRANSCRIPTIONal
BEN82_RS19770	COG0183	Belongs to the thiolase family
BEN82_RS19775	COG2755	lipolytic protein G-D-S-L family
BEN82_RS19835	COG0395	ABC-type sugar transport system, permease component
BEN82_RS19855	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BEN82_RS19865	COG1228	amidohydrolase
BEN82_RS19870	COG1191	sigma factor activity
BEN82_RS19875	COG1366	Belongs to the anti-sigma-factor antagonist family
BEN82_RS19885	COG3104	oligopeptide transport
BEN82_RS19890	COG0745	RESPONSE REGULATOR receiver
BEN82_RS19895	COG2205	protein histidine kinase activity
BEN82_RS19910	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BEN82_RS19935	COG2072	flavoprotein involved in K transport
BEN82_RS19945	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
BEN82_RS19980	COG0753	catalase activity
BEN82_RS20030	COG3046	protein related to deoxyribodipyrimidine photolyase
BEN82_RS20035	COG1316	TRANSCRIPTIONal
BEN82_RS20055	COG1316	TRANSCRIPTIONal
BEN82_RS20085	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
BEN82_RS20085	COG0778	Nitroreductase
BEN82_RS20090	COG0391	Required for morphogenesis under gluconeogenic growth conditions
BEN82_RS20125	COG1620	l-lactate permease
BEN82_RS20135	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BEN82_RS20145	COG2835	tetraacyldisaccharide 4'-kinase activity
BEN82_RS20155	COG1482	cell wall glycoprotein biosynthetic process
BEN82_RS20165	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
BEN82_RS20205	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
BEN82_RS20210	COG0714	Associated with various cellular activities
BEN82_RS20230	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
BEN82_RS20235	COG0745	RESPONSE REGULATOR receiver
BEN82_RS20240	COG5002	protein histidine kinase activity
BEN82_RS20245	COG0823	Involved in the tonB-independent uptake of proteins
BEN82_RS20255	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BEN82_RS20260	COG2197	response regulator
BEN82_RS20265	COG3214	Protein conserved in bacteria
BEN82_RS20270	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BEN82_RS20275	COG0653	protein targeting
BEN82_RS20280	COG0583	DNA-binding transcription factor activity
BEN82_RS20290	COG0583	DNA-binding transcription factor activity
BEN82_RS20310	COG2902	Dehydrogenase
BEN82_RS20325	COG2226	methyltransferase
BEN82_RS20335	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
BEN82_RS20340	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
BEN82_RS20345	COG0438	transferase activity, transferring glycosyl groups
BEN82_RS20350	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
BEN82_RS20355	COG0395	ABC-type sugar transport system, permease component
BEN82_RS20360	COG1175	transmembrane transport
BEN82_RS20365	COG1653	transport
BEN82_RS20375	COG1716	ATPase activity
BEN82_RS20380	COG0515	serine threonine protein kinase
BEN82_RS20385	COG0515	serine threonine protein kinase
BEN82_RS20390	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BEN82_RS20405	COG2884	Cell division ATP-binding protein ftsE
BEN82_RS20415	COG0793	Belongs to the peptidase S41A family
BEN82_RS20420	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
BEN82_RS20435	COG0583	DNA-binding transcription factor activity
BEN82_RS20480	COG3973	AAA domain
BEN82_RS20480	COG3973	AAA domain
BEN82_RS20490	COG0776	regulation of translation
BEN82_RS20495	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BEN82_RS20500	COG1678	Uncharacterized ACR, COG1678
BEN82_RS20515	COG1175	transmembrane transport
BEN82_RS20520	COG0395	ABC-type sugar transport system, permease component
BEN82_RS20525	COG3525	Glycosyl hydrolase, family 20, catalytic domain
BEN82_RS20540	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BEN82_RS20565	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BEN82_RS20590	COG2318	DinB family
BEN82_RS20605	COG1116	anion transmembrane transporter activity
BEN82_RS20650	COG1174	glycine betaine transport
BEN82_RS20655	COG1125	glycine betaine transport
BEN82_RS20655	COG0517	IMP dehydrogenase activity
BEN82_RS20660	COG1174	glycine betaine transport
BEN82_RS20670	COG3185	4-Hydroxyphenylpyruvate dioxygenase
BEN82_RS20680	COG0277	FAD linked oxidase domain protein
BEN82_RS20715	COG1335	isochorismatase
BEN82_RS20725	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
BEN82_RS20740	COG1113	amino acid transport
BEN82_RS20760	COG1234	tRNA 3'-trailer cleavage
BEN82_RS20770	COG1263	PTS System
BEN82_RS20775	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BEN82_RS20780	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
BEN82_RS20790	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BEN82_RS20815	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BEN82_RS20825	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BEN82_RS20840	COG1131	(ABC) transporter
BEN82_RS20855	COG2733	membrane
BEN82_RS20860	COG2271	Major facilitator Superfamily
BEN82_RS20885	COG0706	membrane insertase activity
BEN82_RS20890	COG0179	Fumarylacetoacetate (FAA) hydrolase
BEN82_RS20895	COG0673	inositol 2-dehydrogenase activity
BEN82_RS20950	COG3397	chitin binding
BEN82_RS20980	COG1126	abc transporter atp-binding protein
BEN82_RS20985	COG0765	amino acid transport
BEN82_RS20990	COG0765	amino acid transport
BEN82_RS20995	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BEN82_RS21015	COG3473	Maleate cis-trans isomerase
BEN82_RS21025	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BEN82_RS21030	COG1028	Short-chain dehydrogenase reductase Sdr
BEN82_RS21090	COG1554	hydrolase, family 65, central catalytic
BEN82_RS21140	COG1217	gtp-binding protein TYPA
BEN82_RS21150	COG0601	transmembrane transport
BEN82_RS21155	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BEN82_RS21160	COG0444	Belongs to the ABC transporter superfamily
BEN82_RS21165	COG4608	Belongs to the ABC transporter superfamily
BEN82_RS21175	COG0601	transmembrane transport
BEN82_RS21180	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BEN82_RS21190	COG4608	Belongs to the ABC transporter superfamily
BEN82_RS21215	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BEN82_RS21235	COG3250	beta-galactosidase activity
BEN82_RS21240	COG1879	ABC-type sugar transport system periplasmic component
BEN82_RS21245	COG1129	ABC transporter
BEN82_RS21255	COG1172	Belongs to the binding-protein-dependent transport system permease family
BEN82_RS21260	COG1609	Transcriptional regulator
BEN82_RS21270	COG2912	Transglutaminase-like superfamily
BEN82_RS21275	COG0456	acetyltransferase
BEN82_RS21305	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BEN82_RS21340	COG0519	Catalyzes the synthesis of GMP from XMP
BEN82_RS21350	COG1024	Enoyl-CoA hydratase
BEN82_RS21365	COG1595	DNA-templated transcription, initiation
BEN82_RS21375	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BEN82_RS21380	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BEN82_RS21420	COG0598	Magnesium transport protein CorA
BEN82_RS21430	COG2814	Major facilitator Superfamily
BEN82_RS21435	COG0613	PHP domain protein
BEN82_RS21440	COG2095	MarC family integral membrane protein
BEN82_RS21445	COG1432	Conserved Protein
BEN82_RS21455	COG0513	Belongs to the DEAD box helicase family
BEN82_RS21545	COG0210	DNA helicase
BEN82_RS21585	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BEN82_RS21640	COG3480	Lon protease (S16) C-terminal proteolytic domain
BEN82_RS21650	COG1615	UPF0182 protein
BEN82_RS21675	COG0753	catalase activity
BEN82_RS21680	COG0483	inositol monophosphate 1-phosphatase activity
BEN82_RS21690	COG2076	Multidrug Resistance protein
BEN82_RS21700	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
BEN82_RS21710	COG2135	peptidase activity
BEN82_RS21720	COG1595	DNA-templated transcription, initiation
BEN82_RS21725	COG5662	AntiSigma factor
BEN82_RS21735	COG0242	peptide deformylase activity
BEN82_RS21745	COG2124	cytochrome p450
BEN82_RS21765	COG1966	Carbon starvation protein
BEN82_RS21770	COG2188	Transcriptional regulator
BEN82_RS21775	COG2182	Extracellular solute-binding protein
BEN82_RS21780	COG1175	transmembrane transport
BEN82_RS21785	COG0395	ABC-type sugar transport system, permease component
BEN82_RS21790	COG1472	Belongs to the glycosyl hydrolase 3 family
BEN82_RS21795	COG0363	glucosamine-6-phosphate deaminase activity
BEN82_RS21810	COG1597	lipid kinase activity
BEN82_RS21825	COG2172	sigma factor antagonist activity
BEN82_RS21840	COG2515	1-aminocyclopropane-1-carboxylate deaminase
BEN82_RS21860	COG1959	2 iron, 2 sulfur cluster binding
BEN82_RS21865	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BEN82_RS21875	COG0142	geranyltranstransferase activity
BEN82_RS21925	COG4106	trans-aconitate 2-methyltransferase activity
BEN82_RS21930	COG1126	abc transporter atp-binding protein
BEN82_RS21945	COG0281	malic enzyme
BEN82_RS21950	COG0604	alcohol dehydrogenase
BEN82_RS21995	COG2255	four-way junction helicase activity
BEN82_RS22025	COG0567	Dehydrogenase, E1 component
BEN82_RS22025	COG0508	dehydrogenase complex catalyzes the overall conversion of
BEN82_RS22030	COG2205	protein histidine kinase activity
BEN82_RS22035	COG0745	RESPONSE REGULATOR receiver
BEN82_RS22055	COG1131	(ABC) transporter
BEN82_RS22065	COG1595	DNA-templated transcription, initiation
BEN82_RS22080	COG0477	Major facilitator Superfamily
BEN82_RS22085	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BEN82_RS22090	COG0726	polysaccharide deacetylase
BEN82_RS22165	COG0772	Belongs to the SEDS family
BEN82_RS22180	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
BEN82_RS22185	COG2267	carboxylic ester hydrolase activity
BEN82_RS22195	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
BEN82_RS22195	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BEN82_RS22200	COG1191	sigma factor activity
BEN82_RS22210	COG1012	belongs to the aldehyde dehydrogenase family
BEN82_RS22235	COG0018	arginyl-trna synthetase
BEN82_RS22240	COG0019	diaminopimelate decarboxylase activity
BEN82_RS22245	COG0460	homoserine dehydrogenase
BEN82_RS22250	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BEN82_RS22255	COG0083	homoserine kinase activity
BEN82_RS22265	COG1316	TRANSCRIPTIONal
BEN82_RS22270	COG0254	rRNA binding
BEN82_RS22275	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BEN82_RS22280	COG2890	protein-(glutamine-N5) methyltransferase activity
BEN82_RS22290	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BEN82_RS22295	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BEN82_RS22310	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BEN82_RS22315	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BEN82_RS22320	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BEN82_RS22325	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BEN82_RS22330	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BEN82_RS22335	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BEN82_RS22340	COG0355	proton-transporting ATP synthase activity, rotational mechanism
BEN82_RS22360	COG2197	response regulator
BEN82_RS22365	COG4585	Histidine kinase
BEN82_RS22380	COG1250	3-hydroxyacyl-CoA dehydrogenase
BEN82_RS22395	COG1637	Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
BEN82_RS22430	COG1131	(ABC) transporter
BEN82_RS22450	COG0183	Belongs to the thiolase family
BEN82_RS22480	COG1335	isochorismatase
BEN82_RS22555	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BEN82_RS22555	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BEN82_RS22600	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BEN82_RS22605	COG0857	belongs to the CobB CobQ family
BEN82_RS22605	COG0280	phosphate acetyltransferase
BEN82_RS22610	COG0205	6-phosphofructokinase activity
BEN82_RS22615	COG4565	transcriptional regulatory protein
BEN82_RS22620	COG3290	protein histidine kinase activity
BEN82_RS22625	COG1301	dicarboxylic acid transport
BEN82_RS22640	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BEN82_RS22650	COG1119	ATPase activity
BEN82_RS22665	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BEN82_RS22670	COG3281	Trehalose synthase
BEN82_RS22675	COG0366	Alpha amylase catalytic
BEN82_RS22680	COG0366	Alpha amylase catalytic
BEN82_RS22700	COG1733	regulation of RNA biosynthetic process
BEN82_RS22710	COG1132	(ABC) transporter
BEN82_RS22715	COG1132	(ABC) transporter
BEN82_RS22740	COG1376	ErfK ybiS ycfS ynhG family protein
BEN82_RS22765	COG2085	NADP oxidoreductase coenzyme F420-dependent
BEN82_RS22790	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BEN82_RS22805	COG0477	Major facilitator Superfamily
BEN82_RS22820	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
BEN82_RS22825	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
BEN82_RS22830	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
BEN82_RS22850	COG1760	l-serine dehydratase
BEN82_RS22855	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BEN82_RS22860	COG0509	glycine decarboxylation via glycine cleavage system
BEN82_RS22865	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BEN82_RS22885	COG0747	negative chemotaxis
BEN82_RS22890	COG0601	transmembrane transport
BEN82_RS22895	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BEN82_RS22900	COG0444	Belongs to the ABC transporter superfamily
BEN82_RS22905	COG4608	Belongs to the ABC transporter superfamily
BEN82_RS22910	COG2860	membrane
BEN82_RS22935	COG0482	sulfurtransferase activity
BEN82_RS22955	COG4221	oxidoreductase activity
BEN82_RS22965	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BEN82_RS22975	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BEN82_RS22980	COG0154	amidase activity
BEN82_RS22990	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BEN82_RS22995	COG2409	Drug exporters of the RND superfamily
BEN82_RS23010	COG1672	PFAM Archaeal ATPase
BEN82_RS23010	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
BEN82_RS23025	COG2133	pyrroloquinoline quinone binding
BEN82_RS23030	COG0667	Aldo Keto reductase
BEN82_RS23050	COG0440	acetolactate synthase activity
BEN82_RS23055	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BEN82_RS23065	COG2890	protein-(glutamine-N5) methyltransferase activity
BEN82_RS23085	COG3835	regulator
BEN82_RS23090	COG0506	proline dehydrogenase activity
BEN82_RS23095	COG1012	belongs to the aldehyde dehydrogenase family
BEN82_RS23110	COG0575	Belongs to the CDS family
BEN82_RS23120	COG0473	3-isopropylmalate dehydrogenase activity
BEN82_RS23125	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BEN82_RS23130	COG0831	urea catabolic process
BEN82_RS23130	COG0832	Belongs to the urease beta subunit family
BEN82_RS23135	COG0804	urea catabolic process
BEN82_RS23140	COG2957	Belongs to the agmatine deiminase family
BEN82_RS23145	COG0477	Major facilitator Superfamily
BEN82_RS23150	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BEN82_RS23180	COG4221	oxidoreductase activity
BEN82_RS23200	COG0789	Transcriptional regulator
BEN82_RS23240	COG2353	YceI-like domain
BEN82_RS23250	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BEN82_RS23270	COG2018	Roadblock/LC7 domain
BEN82_RS23290	COG2018	Roadblock/LC7 domain
BEN82_RS23305	COG0179	Fumarylacetoacetate (FAA) hydrolase
BEN82_RS23310	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BEN82_RS23355	COG1414	Transcriptional regulator
BEN82_RS23360	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
BEN82_RS23365	COG0066	3-isopropylmalate dehydratase activity
BEN82_RS23375	COG0776	regulation of translation
BEN82_RS23385	COG1920	GTP binding
BEN82_RS23395	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
BEN82_RS23400	COG1181	Belongs to the D-alanine--D-alanine ligase family
BEN82_RS23420	COG0351	phosphomethylpyrimidine kinase
BEN82_RS23425	COG0227	Belongs to the bacterial ribosomal protein bL28 family
BEN82_RS23430	COG1461	Dihydroxyacetone kinase
BEN82_RS23440	COG0742	ribosomal rna small subunit methyltransferase
BEN82_RS23445	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BEN82_RS23460	COG0333	Belongs to the bacterial ribosomal protein bL32 family
BEN82_RS23465	COG0571	ribonuclease III activity
BEN82_RS23470	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
BEN82_RS23475	COG2340	Cysteine-rich secretory protein family
BEN82_RS23480	COG1254	Belongs to the acylphosphatase family
BEN82_RS23495	COG0477	Major facilitator Superfamily
BEN82_RS23525	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
BEN82_RS23535	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BEN82_RS23550	COG0228	four-way junction DNA binding
BEN82_RS23555	COG1837	Belongs to the UPF0109 family
BEN82_RS23560	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BEN82_RS23565	COG0336	Belongs to the RNA methyltransferase TrmD family
BEN82_RS23570	COG0335	large ribosomal subunit rRNA binding
BEN82_RS23575	COG0681	Belongs to the peptidase S26 family
BEN82_RS23580	COG0681	Belongs to the peptidase S26 family
BEN82_RS23585	COG0681	Belongs to the peptidase S26 family
BEN82_RS23590	COG0681	Belongs to the peptidase S26 family
BEN82_RS23605	COG0792	nuclease activity
BEN82_RS23620	COG1191	sigma factor activity
BEN82_RS23630	COG0052	Belongs to the universal ribosomal protein uS2 family
BEN82_RS23635	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BEN82_RS23640	COG0528	UMP kinase activity
BEN82_RS23645	COG0233	cytoplasmic translational termination
BEN82_RS23655	COG0820	rRNA (adenine-C2-)-methyltransferase activity
BEN82_RS23670	COG3842	ATPase activity
BEN82_RS23695	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BEN82_RS23705	COG1012	belongs to the aldehyde dehydrogenase family
BEN82_RS23710	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BEN82_RS23725	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BEN82_RS23740	COG1012	belongs to the aldehyde dehydrogenase family
BEN82_RS23750	COG3842	ATPase activity
BEN82_RS23755	COG1176	ABC-type spermidine putrescine transport system, permease component I
BEN82_RS23760	COG1177	transmembrane transport
BEN82_RS23765	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BEN82_RS23795	COG2508	Transcriptional regulator
BEN82_RS23800	COG1012	belongs to the aldehyde dehydrogenase family
BEN82_RS23805	COG1940	carbohydrate kinase activity
BEN82_RS23815	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
BEN82_RS23820	COG0750	zinc metalloprotease
BEN82_RS23825	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
BEN82_RS23840	COG0747	negative chemotaxis
BEN82_RS23845	COG0601	transmembrane transport
BEN82_RS23850	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BEN82_RS23870	COG0442	prolyl-tRNA aminoacylation
BEN82_RS23890	COG0779	Required for maturation of 30S ribosomal subunits
BEN82_RS23905	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BEN82_RS23915	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BEN82_RS23920	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BEN82_RS23935	COG1357	PFAM Pentapeptide repeats (8 copies)
BEN82_RS23940	COG4608	Belongs to the ABC transporter superfamily
BEN82_RS23945	COG0444	Belongs to the ABC transporter superfamily
BEN82_RS23950	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BEN82_RS23955	COG0601	transmembrane transport
BEN82_RS23960	COG0747	negative chemotaxis
BEN82_RS23965	COG0455	bacterial-type flagellum organization
BEN82_RS23975	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BEN82_RS23980	COG1185	polyribonucleotide nucleotidyltransferase activity
BEN82_RS23985	COG0612	Peptidase, M16
BEN82_RS23990	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
BEN82_RS24010	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
BEN82_RS24015	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BEN82_RS24020	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BEN82_RS24050	COG2770	Histidine kinase
BEN82_RS24050	COG2208	phosphoserine phosphatase activity
BEN82_RS24055	COG2205	protein histidine kinase activity
BEN82_RS24055	COG3437	response regulator, receiver
BEN82_RS24055	COG4999	Histidine kinase
BEN82_RS24055	COG3850	Histidine kinase
BEN82_RS24065	COG1674	ftsk spoiiie
BEN82_RS24075	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BEN82_RS24085	COG1546	Belongs to the CinA family
BEN82_RS24085	COG1058	Belongs to the CinA family
BEN82_RS24090	COG1396	sequence-specific DNA binding
BEN82_RS24095	COG0783	Belongs to the Dps family
BEN82_RS24105	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
BEN82_RS24125	COG0596	Alpha beta hydrolase
BEN82_RS24130	COG1201	RNA secondary structure unwinding
BEN82_RS24155	COG0628	permease
BEN82_RS24180	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BEN82_RS24185	COG2137	regulation of response to DNA damage stimulus
BEN82_RS24205	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BEN82_RS24210	COG0765	amino acid transport
BEN82_RS24215	COG0765	amino acid transport
BEN82_RS24220	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BEN82_RS24225	COG1126	abc transporter atp-binding protein
BEN82_RS24230	COG0745	RESPONSE REGULATOR receiver
BEN82_RS24235	COG2205	protein histidine kinase activity
BEN82_RS24245	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BEN82_RS24265	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BEN82_RS24275	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
BEN82_RS24280	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BEN82_RS24290	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BEN82_RS24330	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BEN82_RS24335	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BEN82_RS24340	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BEN82_RS24360	COG0588	phosphoglycerate mutase activity
BEN82_RS24375	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BEN82_RS24410	COG1802	Transcriptional regulator
BEN82_RS24415	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BEN82_RS24450	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BEN82_RS24470	COG1175	transmembrane transport
BEN82_RS24475	COG0395	ABC-type sugar transport system, permease component
BEN82_RS24480	COG0366	Alpha amylase catalytic
BEN82_RS24490	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BEN82_RS24495	COG0612	Peptidase, M16
BEN82_RS24510	COG1802	Transcriptional regulator
BEN82_RS24515	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BEN82_RS24565	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
BEN82_RS24570	COG0483	inositol monophosphate 1-phosphatase activity
BEN82_RS24575	COG0745	RESPONSE REGULATOR receiver
BEN82_RS24580	COG2205	protein histidine kinase activity
BEN82_RS24605	COG0756	dUTP diphosphatase activity
BEN82_RS24625	COG1136	(ABC) transporter
BEN82_RS24625	COG4591	ABC-type transport system involved in lipoprotein release permease component
BEN82_RS24655	COG0569	domain protein
BEN82_RS24660	COG0531	amino acid
BEN82_RS24665	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BEN82_RS24675	COG0438	transferase activity, transferring glycosyl groups
BEN82_RS24725	COG0577	efflux transmembrane transporter activity
BEN82_RS24725	COG1136	(ABC) transporter
BEN82_RS24735	COG2197	response regulator
BEN82_RS24740	COG0438	transferase activity, transferring glycosyl groups
BEN82_RS24755	COG1063	alcohol dehydrogenase
BEN82_RS24760	COG0395	ABC-type sugar transport system, permease component
BEN82_RS24795	COG0559	Belongs to the binding-protein-dependent transport system permease family
BEN82_RS24810	COG0402	S-adenosylhomocysteine deaminase activity
BEN82_RS24815	COG2233	PERMEase
BEN82_RS24900	COG1127	ABC transporter
BEN82_RS24910	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BEN82_RS24935	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BEN82_RS24970	COG0656	L-ascorbic acid biosynthetic process
BEN82_RS24985	COG0473	3-isopropylmalate dehydrogenase activity
BEN82_RS24995	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
BEN82_RS25040	COG1028	Short-chain dehydrogenase reductase Sdr
BEN82_RS25060	COG1028	Short-chain dehydrogenase reductase Sdr
BEN82_RS25070	COG0252	asparaginase activity
BEN82_RS25075	COG1846	Transcriptional regulator
BEN82_RS25075	COG1940	carbohydrate kinase activity
BEN82_RS25080	COG1129	ABC transporter
BEN82_RS25085	COG1172	Belongs to the binding-protein-dependent transport system permease family
BEN82_RS25090	COG1172	Belongs to the binding-protein-dependent transport system permease family
BEN82_RS25095	COG4213	ABC transporter substrate-binding protein
BEN82_RS25110	COG0738	Major facilitator superfamily
BEN82_RS25115	COG3226	Transcriptional regulator
BEN82_RS25165	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BEN82_RS25190	COG0789	Transcriptional regulator
BEN82_RS25205	COG2050	protein possibly involved in aromatic compounds catabolism
BEN82_RS25215	COG3540	Alkaline phosphatase
BEN82_RS25235	COG2936	dipeptidyl-peptidase activity
BEN82_RS25250	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BEN82_RS25265	COG1309	transcriptional regulator
BEN82_RS25275	COG0747	negative chemotaxis
BEN82_RS25285	COG0601	transmembrane transport
BEN82_RS25290	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BEN82_RS25310	COG1733	regulation of RNA biosynthetic process
BEN82_RS25320	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BEN82_RS25325	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BEN82_RS25330	COG1120	ATPase activity
BEN82_RS25345	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BEN82_RS25355	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BEN82_RS25395	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
BEN82_RS25410	COG0247	lactate metabolic process
BEN82_RS25415	COG1139	Iron-sulfur cluster binding protein
BEN82_RS25420	COG1556	Lactate utilization protein
BEN82_RS25435	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
BEN82_RS25445	COG1799	cell septum assembly
BEN82_RS25480	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
BEN82_RS25500	COG2235	arginine
BEN82_RS25505	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BEN82_RS25510	COG0531	amino acid
BEN82_RS25540	COG2124	cytochrome p450
BEN82_RS25550	COG2111	Na H antiporter
BEN82_RS25550	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BEN82_RS25555	COG1006	Multisubunit Na H antiporter MnhC subunit
BEN82_RS25560	COG0651	ATP synthesis coupled electron transport
BEN82_RS25575	COG1320	monovalent cation:proton antiporter activity
BEN82_RS25580	COG2235	arginine
BEN82_RS25600	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BEN82_RS25605	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BEN82_RS25610	COG1120	ATPase activity
BEN82_RS25630	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BEN82_RS25660	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BEN82_RS25665	COG1653	transport
BEN82_RS25670	COG1175	transmembrane transport
BEN82_RS25675	COG0395	ABC-type sugar transport system, permease component
BEN82_RS25685	COG4213	ABC transporter substrate-binding protein
BEN82_RS25695	COG4214	carbohydrate transport
BEN82_RS25700	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
BEN82_RS25705	COG0531	amino acid
BEN82_RS25725	COG1250	3-hydroxyacyl-CoA dehydrogenase
BEN82_RS25725	COG1024	Enoyl-CoA hydratase
BEN82_RS25730	COG0183	Belongs to the thiolase family
BEN82_RS25750	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
BEN82_RS25755	COG0446	pyridine nucleotide-disulphide oxidoreductase
BEN82_RS25765	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
BEN82_RS25770	COG3253	May function as heme-dependent peroxidase
BEN82_RS25780	COG3220	belongs to the UPF0276 family
BEN82_RS25790	COG0726	polysaccharide deacetylase
BEN82_RS25805	COG1595	DNA-templated transcription, initiation
BEN82_RS25810	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
BEN82_RS25830	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BEN82_RS25835	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BEN82_RS25900	COG2176	DNA-directed DNA polymerase activity
BEN82_RS25900	COG5002	protein histidine kinase activity
BEN82_RS25935	COG0386	Belongs to the glutathione peroxidase family
BEN82_RS25950	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BEN82_RS25955	COG1116	anion transmembrane transporter activity
BEN82_RS25980	COG0529	Catalyzes the synthesis of activated sulfate
BEN82_RS25985	COG0175	sulfate reduction
BEN82_RS25995	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BEN82_RS26020	COG0604	alcohol dehydrogenase
BEN82_RS26025	COG1960	acyl-CoA dehydrogenase activity
BEN82_RS26045	COG2040	homocysteine
BEN82_RS26070	COG2255	four-way junction helicase activity
BEN82_RS26080	COG1120	ATPase activity
BEN82_RS26085	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BEN82_RS26095	COG2409	Drug exporters of the RND superfamily
BEN82_RS26100	COG1846	Transcriptional regulator
BEN82_RS26105	COG0702	epimerase
BEN82_RS26125	COG1595	DNA-templated transcription, initiation
BEN82_RS26165	COG2365	Tyrosine phosphatase family
BEN82_RS26175	COG1162	GTPase activity
BEN82_RS26180	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BEN82_RS26200	COG0028	Belongs to the TPP enzyme family
BEN82_RS26215	COG1028	Short-chain dehydrogenase reductase Sdr
BEN82_RS26230	COG1802	Transcriptional regulator
BEN82_RS26240	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
BEN82_RS26245	COG3835	regulator
BEN82_RS26260	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BEN82_RS26265	COG2252	PERMEase
BEN82_RS26315	COG2197	response regulator
BEN82_RS26320	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BEN82_RS26325	COG0318	PFAM AMP-dependent synthetase and ligase
BEN82_RS26335	COG3960	tartronate-semialdehyde synthase activity
BEN82_RS26340	COG0753	catalase activity
BEN82_RS26345	COG2084	Dehydrogenase
BEN82_RS26350	COG3622	Belongs to the hyi family
BEN82_RS26370	COG2351	hydroxyisourate hydrolase activity
BEN82_RS26385	COG2233	PERMEase
BEN82_RS26440	COG1609	Transcriptional regulator
BEN82_RS26460	COG1621	beta-fructofuranosidase activity
BEN82_RS26465	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BEN82_RS26470	COG3795	YCII-related domain
BEN82_RS26475	COG4941	Belongs to the sigma-70 factor family
BEN82_RS26490	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BEN82_RS26495	COG2080	2 iron, 2 sulfur cluster binding
BEN82_RS26500	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
BEN82_RS26505	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BEN82_RS26520	COG1414	Transcriptional regulator
BEN82_RS26525	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BEN82_RS26540	COG4585	Histidine kinase
BEN82_RS26545	COG2197	response regulator
BEN82_RS26560	COG0673	inositol 2-dehydrogenase activity
BEN82_RS26565	COG2188	Transcriptional regulator
BEN82_RS26575	COG1172	Belongs to the binding-protein-dependent transport system permease family
BEN82_RS26585	COG1940	carbohydrate kinase activity
BEN82_RS26595	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BEN82_RS26675	COG0464	growth
BEN82_RS26685	COG2197	response regulator
BEN82_RS26715	COG2207	Transcriptional regulator
BEN82_RS26720	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BEN82_RS26725	COG2375	cellular response to nickel ion
BEN82_RS26730	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BEN82_RS26735	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BEN82_RS26740	COG1120	ATPase activity
BEN82_RS26745	COG1132	(ABC) transporter
BEN82_RS26750	COG1132	(ABC) transporter
BEN82_RS26755	COG5183	chlorophyll binding
BEN82_RS26755	COG2133	pyrroloquinoline quinone binding
BEN82_RS26785	COG1960	acyl-CoA dehydrogenase activity
BEN82_RS26800	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BEN82_RS26835	COG1126	abc transporter atp-binding protein
BEN82_RS26840	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BEN82_RS26845	COG0765	amino acid transport
BEN82_RS26850	COG0765	amino acid transport
BEN82_RS26880	COG0405	Gamma-glutamyltransferase
BEN82_RS26905	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BEN82_RS26925	COG0095	Lipoate-protein ligase
BEN82_RS26935	COG0483	inositol monophosphate 1-phosphatase activity
BEN82_RS26950	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
BEN82_RS26965	COG0159	tryptophan synthase activity
BEN82_RS26990	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
BEN82_RS27000	COG1028	Short-chain dehydrogenase reductase Sdr
BEN82_RS27005	COG0702	epimerase
BEN82_RS27010	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BEN82_RS27025	COG0488	(ABC) transporter
BEN82_RS27040	COG0688	phosphatidylethanolamine metabolic process
BEN82_RS27055	COG2301	Belongs to the HpcH HpaI aldolase family
BEN82_RS27060	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BEN82_RS27060	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BEN82_RS27065	COG0604	alcohol dehydrogenase
BEN82_RS27075	COG1250	3-hydroxyacyl-CoA dehydrogenase
BEN82_RS27080	COG1120	ATPase activity
BEN82_RS27085	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BEN82_RS27090	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BEN82_RS27135	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BEN82_RS27145	COG1619	proteins homologs of microcin C7 resistance protein MccF
BEN82_RS27165	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BEN82_RS27190	COG3226	Transcriptional regulator
BEN82_RS27205	COG4106	trans-aconitate 2-methyltransferase activity
BEN82_RS27210	COG1597	lipid kinase activity
BEN82_RS27220	COG0693	protein deglycase activity
BEN82_RS27280	COG1140	nitrate reductase beta subunit
BEN82_RS27310	COG2154	pterin-4-alpha-carbinolamine dehydratase
BEN82_RS27335	COG1115	amino acid carrier protein
BEN82_RS27340	COG0583	DNA-binding transcription factor activity
BEN82_RS27350	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BEN82_RS27360	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BEN82_RS27365	COG1940	carbohydrate kinase activity
BEN82_RS27370	COG1129	ABC transporter
BEN82_RS27375	COG1172	Belongs to the binding-protein-dependent transport system permease family
BEN82_RS27385	COG0673	inositol 2-dehydrogenase activity
BEN82_RS27460	COG1414	Transcriptional regulator
BEN82_RS27470	COG3328	transposase activity
BEN82_RS27480	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BEN82_RS27520	COG0210	DNA helicase
BEN82_RS27580	COG1295	ribonuclease BN
BEN82_RS27600	COG1609	Transcriptional regulator
BEN82_RS27605	COG1129	ABC transporter
BEN82_RS27610	COG1172	Belongs to the binding-protein-dependent transport system permease family
BEN82_RS27615	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BEN82_RS27620	COG1869	D-ribose catabolic process
BEN82_RS27630	COG2259	Doxx family
BEN82_RS27635	COG2814	Major facilitator Superfamily
BEN82_RS27655	COG1012	belongs to the aldehyde dehydrogenase family
BEN82_RS27715	COG1846	Transcriptional regulator
BEN82_RS27760	COG0789	Transcriptional regulator
BEN82_RS27795	COG1024	Enoyl-CoA hydratase
BEN82_RS27800	COG1793	dna ligase
BEN82_RS27810	COG0254	rRNA binding
BEN82_RS27845	COG0438	transferase activity, transferring glycosyl groups
BEN82_RS27865	COG0488	(ABC) transporter
BEN82_RS27875	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BEN82_RS27875	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BEN82_RS27885	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BEN82_RS27915	COG1515	deoxyribonuclease V activity
BEN82_RS27925	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BEN82_RS27935	COG0183	Belongs to the thiolase family
BEN82_RS27940	COG1250	3-hydroxyacyl-CoA dehydrogenase
BEN82_RS27940	COG1024	Enoyl-CoA hydratase
BEN82_RS27945	COG0789	Transcriptional regulator
BEN82_RS27950	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BEN82_RS27975	COG0402	S-adenosylhomocysteine deaminase activity
BEN82_RS27980	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BEN82_RS27985	COG1802	Transcriptional regulator
BEN82_RS28000	COG2183	response to ionizing radiation
BEN82_RS28015	COG1024	Enoyl-CoA hydratase
BEN82_RS28030	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
BEN82_RS28045	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BEN82_RS28070	COG1134	teichoic acid transport
BEN82_RS28070	COG1388	LysM domain
BEN82_RS28075	COG1562	ergosterol biosynthetic process
BEN82_RS28095	COG1657	PFAM Prenyltransferase squalene oxidase
BEN82_RS28125	COG2365	Tyrosine phosphatase family
BEN82_RS28130	COG2755	lipolytic protein G-D-S-L family
BEN82_RS28200	COG3958	Transketolase
BEN82_RS28205	COG3959	Transketolase, thiamine diphosphate binding domain
BEN82_RS28225	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BEN82_RS28230	COG4521	taurine ABC transporter
BEN82_RS28265	COG0740	serine-type endopeptidase activity
BEN82_RS28270	COG0740	serine-type endopeptidase activity
BEN82_RS28315	COG2391	methyltransferase activity
BEN82_RS28320	COG1960	acyl-CoA dehydrogenase activity
BEN82_RS28325	COG1250	3-hydroxyacyl-CoA dehydrogenase
BEN82_RS28330	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BEN82_RS28335	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BEN82_RS28340	COG0583	DNA-binding transcription factor activity
BEN82_RS28345	COG0183	Belongs to the thiolase family
BEN82_RS28350	COG0477	Major facilitator Superfamily
BEN82_RS28420	COG1233	COG1233 Phytoene dehydrogenase and related
BEN82_RS28425	COG2130	NADP-dependent
BEN82_RS28430	COG2124	cytochrome p450
BEN82_RS28465	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BEN82_RS28510	COG2018	Roadblock/LC7 domain
BEN82_RS28525	COG1946	Acyl-CoA thioesterase
BEN82_RS28540	COG1132	(ABC) transporter
BEN82_RS28545	COG1132	(ABC) transporter
BEN82_RS28565	COG1132	(ABC) transporter
BEN82_RS28570	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BEN82_RS28580	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BEN82_RS28590	COG1116	anion transmembrane transporter activity
BEN82_RS28595	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BEN82_RS28600	COG0432	Pfam Uncharacterised protein family UPF0047
BEN82_RS28605	COG1609	Transcriptional regulator
BEN82_RS28615	COG1175	transmembrane transport
BEN82_RS28625	COG1472	Belongs to the glycosyl hydrolase 3 family
BEN82_RS28635	COG1309	transcriptional regulator
BEN82_RS28640	COG0477	Major facilitator Superfamily
BEN82_RS28660	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
BEN82_RS28680	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
BEN82_RS28695	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BEN82_RS28720	COG2814	Major facilitator Superfamily
BEN82_RS28725	COG2207	Transcriptional regulator
BEN82_RS28730	COG1120	ATPase activity
BEN82_RS28735	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BEN82_RS28755	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BEN82_RS28780	COG0583	DNA-binding transcription factor activity
BEN82_RS28785	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BEN82_RS28800	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BEN82_RS28805	COG0303	'Molybdopterin
BEN82_RS28810	COG0314	molybdopterin synthase activity
BEN82_RS28820	COG0243	molybdopterin cofactor binding
BEN82_RS28825	COG0076	glutamate decarboxylase activity
BEN82_RS28830	COG0071	Belongs to the small heat shock protein (HSP20) family
BEN82_RS28835	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BEN82_RS28845	COG2706	6-phosphogluconolactonase activity
BEN82_RS28860	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BEN82_RS28875	COG1902	pentaerythritol trinitrate reductase activity
BEN82_RS28880	COG0640	Transcriptional regulator
BEN82_RS28885	COG2233	PERMEase
BEN82_RS28915	COG0671	phosphoesterase, PA-phosphatase related
BEN82_RS28935	COG1846	Transcriptional regulator
BEN82_RS28950	COG0584	glycerophosphoryl diester phosphodiesterase
BEN82_RS28990	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
BEN82_RS29015	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BEN82_RS29030	COG2197	response regulator
BEN82_RS29045	COG2223	nitrite transmembrane transporter activity
BEN82_RS29055	COG1940	carbohydrate kinase activity
BEN82_RS29075	COG1349	DNA-binding transcription factor activity
BEN82_RS29095	COG3217	Mosc domain protein beta barrel domain protein
BEN82_RS29095	COG0633	Ferredoxin
BEN82_RS29110	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
BEN82_RS29120	COG0513	Belongs to the DEAD box helicase family
BEN82_RS29135	COG1028	Short-chain dehydrogenase reductase Sdr
BEN82_RS29160	COG1695	Transcriptional regulator
BEN82_RS29190	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BEN82_RS29215	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BEN82_RS29220	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BEN82_RS29225	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BEN82_RS29225	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BEN82_RS29225	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
BEN82_RS29235	COG1349	DNA-binding transcription factor activity
BEN82_RS29250	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BEN82_RS29260	COG1250	3-hydroxyacyl-CoA dehydrogenase
BEN82_RS29270	COG1960	acyl-CoA dehydrogenase activity
BEN82_RS29280	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BEN82_RS29300	COG1120	ATPase activity
BEN82_RS29315	COG0640	Transcriptional regulator
BEN82_RS29320	COG0346	lactoylglutathione lyase activity
BEN82_RS29330	COG0702	epimerase
BEN82_RS29345	COG0326	Molecular chaperone. Has ATPase activity
BEN82_RS29365	COG1131	(ABC) transporter
BEN82_RS29370	COG1562	ergosterol biosynthetic process
BEN82_RS29405	COG0667	Aldo Keto reductase
BEN82_RS29430	COG1595	DNA-templated transcription, initiation
BEN82_RS29460	COG0431	NADPH-dependent FMN reductase
BEN82_RS29465	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BEN82_RS29470	COG0328	RNA-DNA hybrid ribonuclease activity
BEN82_RS29485	COG0477	Major facilitator Superfamily
BEN82_RS29490	COG1309	transcriptional regulator
BEN82_RS29495	COG1131	(ABC) transporter
BEN82_RS29500	COG3559	Exporter of polyketide antibiotics
BEN82_RS29505	COG2267	carboxylic ester hydrolase activity
BEN82_RS29520	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BEN82_RS29530	COG1181	Belongs to the D-alanine--D-alanine ligase family
BEN82_RS29535	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BEN82_RS29590	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BEN82_RS29595	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BEN82_RS29615	COG3433	isochorismatase activity
BEN82_RS29615	COG1535	isochorismatase
BEN82_RS29620	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BEN82_RS29630	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BEN82_RS29635	COG1120	ATPase activity
BEN82_RS29670	COG3268	Saccharopine dehydrogenase
BEN82_RS29680	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BEN82_RS29695	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BEN82_RS29705	COG2197	response regulator
BEN82_RS29725	COG0475	glutathione-regulated potassium exporter activity
BEN82_RS29760	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BEN82_RS29770	COG0446	pyridine nucleotide-disulphide oxidoreductase
BEN82_RS29770	COG1902	pentaerythritol trinitrate reductase activity
BEN82_RS29790	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BEN82_RS29800	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
BEN82_RS29810	COG0713	ATP synthesis coupled electron transport
BEN82_RS29815	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BEN82_RS29820	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BEN82_RS29825	COG1007	ATP synthesis coupled electron transport
BEN82_RS29845	COG2267	carboxylic ester hydrolase activity
BEN82_RS29860	COG2084	Dehydrogenase
BEN82_RS29890	COG2356	endonuclease I
BEN82_RS29900	COG2813	Specifically methylates the guanine in position
BEN82_RS29905	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BEN82_RS29910	COG0589	response to stress
BEN82_RS29915	COG0318	PFAM AMP-dependent synthetase and ligase
BEN82_RS29965	COG0277	FAD linked oxidase domain protein
BEN82_RS30000	COG1793	dna ligase
BEN82_RS30035	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BEN82_RS30045	COG0747	negative chemotaxis
BEN82_RS30050	COG0601	transmembrane transport
BEN82_RS30055	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BEN82_RS30060	COG0444	Belongs to the ABC transporter superfamily
BEN82_RS30065	COG4608	Belongs to the ABC transporter superfamily
BEN82_RS30090	COG0657	acetylesterase activity
BEN82_RS30115	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BEN82_RS30115	COG0446	pyridine nucleotide-disulphide oxidoreductase
BEN82_RS30190	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
BEN82_RS30195	COG4585	Histidine kinase
BEN82_RS30200	COG2197	response regulator
BEN82_RS30210	COG2080	2 iron, 2 sulfur cluster binding
BEN82_RS30215	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
BEN82_RS30220	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BEN82_RS30245	COG0477	Major facilitator Superfamily
BEN82_RS30250	COG1028	Short-chain dehydrogenase reductase Sdr
BEN82_RS30270	COG1175	transmembrane transport
BEN82_RS30275	COG0395	ABC-type sugar transport system, permease component
BEN82_RS30280	COG1609	Transcriptional regulator
BEN82_RS30285	COG1874	Beta-galactosidase
BEN82_RS30290	COG1472	Belongs to the glycosyl hydrolase 3 family
BEN82_RS30325	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BEN82_RS30345	COG3629	intracellular signal transduction
BEN82_RS30355	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis