CXR04_RS00005	SM00487	DEAD-like helicases superfamily
CXR04_RS00005	SM00490	helicase superfamily c-terminal domain
CXR04_RS00065	SM00020	Trypsin-like serine protease
CXR04_RS00095	SM00823	Phosphopantetheine attachment site
CXR04_RS00110	SM00822	CXR04_RS00110
CXR04_RS00115	SM00822	CXR04_RS00115
CXR04_RS00115	SM00823	Phosphopantetheine attachment site
CXR04_RS00115	SM00825	Beta-ketoacyl synthase
CXR04_RS00115	SM00826	CXR04_RS00115
CXR04_RS00115	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CXR04_RS00120	SM00823	Phosphopantetheine attachment site
CXR04_RS00125	SM00823	Phosphopantetheine attachment site
CXR04_RS00125	SM00825	Beta-ketoacyl synthase
CXR04_RS00125	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CXR04_RS00130	SM00822	CXR04_RS00130
CXR04_RS00130	SM00823	Phosphopantetheine attachment site
CXR04_RS00130	SM00825	Beta-ketoacyl synthase
CXR04_RS00130	SM00826	CXR04_RS00130
CXR04_RS00130	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CXR04_RS00130	SM00829	Enoylreductase
CXR04_RS00130	SM01294	CXR04_RS00130
CXR04_RS00135	SM00829	Enoylreductase
CXR04_RS00140	SM00923	MbtH-like protein
CXR04_RS00145	SM00470	ParB-like nuclease domain
CXR04_RS00165	SM00631	CXR04_RS00165
CXR04_RS00170	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS00195	SM00100	Cyclic nucleotide-monophosphate binding domain
CXR04_RS00205	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS00210	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CXR04_RS00215	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS00215	SM00448	cheY-homologous receiver domain
CXR04_RS00220	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CXR04_RS00220	SM00091	PAS domain
CXR04_RS00220	SM00387	Histidine kinase-like ATPases
CXR04_RS00225	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS00230	SM00387	Histidine kinase-like ATPases
CXR04_RS00240	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CXR04_RS00240	SM00091	PAS domain
CXR04_RS00270	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS00340	SM01217	CXR04_RS00340
CXR04_RS00345	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS00350	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS00375	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS00410	SM00829	Enoylreductase
CXR04_RS00430	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS00440	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS00460	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CXR04_RS00525	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS00605	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS00635	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS00635	SM01043	Bacterial transcriptional activator domain
CXR04_RS00645	SM00481	DNA polymerase alpha chain like domain
CXR04_RS00650	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS00705	SM00420	helix_turn_helix, Deoxyribose operon repressor
CXR04_RS00705	SM01134	CXR04_RS00705
CXR04_RS00725	SM00829	Enoylreductase
CXR04_RS00735	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CXR04_RS00735	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS00750	SM01006	Siderophore biosynthesis protein domain
CXR04_RS00755	SM00822	CXR04_RS00755
CXR04_RS00765	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CXR04_RS00775	SM00346	helix_turn_helix isocitrate lyase regulation
CXR04_RS00775	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS00810	SM01130	CXR04_RS00810
CXR04_RS00840	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS00855	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS00885	SM00344	helix_turn_helix ASNC type
CXR04_RS00905	SM00822	CXR04_RS00905
CXR04_RS00920	SM00947	Carbonic anhydrase
CXR04_RS00935	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS00940	SM00116	Domain in cystathionine beta-synthase and other proteins.
CXR04_RS00945	SM01091	Transporter associated domain
CXR04_RS01005	SM00344	helix_turn_helix ASNC type
CXR04_RS01010	SM00116	Domain in cystathionine beta-synthase and other proteins.
CXR04_RS01010	SM01240	CXR04_RS01010
CXR04_RS01080	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS01110	SM00564	beta-propeller repeat
CXR04_RS01115	SM00495	Chitin-binding domain type 3
CXR04_RS01125	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS01130	SM00495	Chitin-binding domain type 3
CXR04_RS01190	SM00060	Fibronectin type 3 domain
CXR04_RS01190	SM00636	CXR04_RS01190
CXR04_RS01190	SM00637	CXR04_RS01190
CXR04_RS01195	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS01195	SM00448	cheY-homologous receiver domain
CXR04_RS01255	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS01290	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS01310	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS01375	SM00429	ig-like, plexins, transcription factors
CXR04_RS01380	SM00429	ig-like, plexins, transcription factors
CXR04_RS01395	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS01445	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS01470	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CXR04_RS01470	SM00387	Histidine kinase-like ATPases
CXR04_RS01470	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS01475	SM00448	cheY-homologous receiver domain
CXR04_RS01475	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS01485	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS01525	SM01012	CXR04_RS01525
CXR04_RS01625	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS01630	SM00831	Cation transporter/ATPase, N-terminus
CXR04_RS01645	SM00776	CXR04_RS01645
CXR04_RS01680	SM00478	endonuclease III
CXR04_RS01680	SM01009	AlkA N-terminal domain
CXR04_RS01780	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS01790	SM00014	Acid phosphatase homologues
CXR04_RS01805	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS01845	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS01870	SM00662	RNA polymerases D
CXR04_RS01875	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
CXR04_RS01885	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS01935	SM00257	Lysin motif
CXR04_RS01940	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS01975	SM00861	Transketolase, pyrimidine binding domain
CXR04_RS02020	SM00960	Roadblock/LC7 domain
CXR04_RS02025	SM00387	Histidine kinase-like ATPases
CXR04_RS02050	SM00861	Transketolase, pyrimidine binding domain
CXR04_RS02100	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS02155	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS02170	SM00316	Ribosomal protein S1-like RNA-binding domain
CXR04_RS02170	SM00732	Likely ribonuclease with RNase H fold.
CXR04_RS02190	SM00631	CXR04_RS02190
CXR04_RS02195	SM00422	helix_turn_helix, mercury resistance
CXR04_RS02200	SM00644	CXR04_RS02200
CXR04_RS02200	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
CXR04_RS02295	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CXR04_RS02295	SM00387	Histidine kinase-like ATPases
CXR04_RS02295	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS02300	SM00448	cheY-homologous receiver domain
CXR04_RS02300	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS02310	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS02340	SM00823	Phosphopantetheine attachment site
CXR04_RS02340	SM00824	Thioesterase
CXR04_RS02345	SM00823	Phosphopantetheine attachment site
CXR04_RS02350	SM00823	Phosphopantetheine attachment site
CXR04_RS02355	SM00823	Phosphopantetheine attachment site
CXR04_RS02360	SM00823	Phosphopantetheine attachment site
CXR04_RS02365	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS02370	SM00923	MbtH-like protein
CXR04_RS02375	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CXR04_RS02375	SM00387	Histidine kinase-like ATPases
CXR04_RS02375	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS02380	SM00448	cheY-homologous receiver domain
CXR04_RS02380	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS02425	SM00470	ParB-like nuclease domain
CXR04_RS02450	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS02460	SM00387	Histidine kinase-like ATPases
CXR04_RS02465	SM00448	cheY-homologous receiver domain
CXR04_RS02465	SM00850	LytTr DNA-binding domain
CXR04_RS02520	SM00231	Coagulation factor 5/8 C-terminal domain, discoidin domain
CXR04_RS02530	SM00889	Elongation factor G, domain IV
CXR04_RS02545	SM00420	helix_turn_helix, Deoxyribose operon repressor
CXR04_RS02545	SM01134	CXR04_RS02545
CXR04_RS02565	SM01217	CXR04_RS02565
CXR04_RS02585	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS02610	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS02630	SM00758	CXR04_RS02630
CXR04_RS02635	SM01130	CXR04_RS02635
CXR04_RS02640	SM00479	CXR04_RS02640
CXR04_RS02655	SM00327	von Willebrand factor (vWF) type A domain
CXR04_RS02665	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CXR04_RS02670	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CXR04_RS02735	SM00960	Roadblock/LC7 domain
CXR04_RS02775	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS02800	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS02810	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS02850	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS02885	SM00829	Enoylreductase
CXR04_RS02915	SM00346	helix_turn_helix isocitrate lyase regulation
CXR04_RS02950	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS02965	SM01038	Beta galactosidase small chain
CXR04_RS03005	SM00346	helix_turn_helix isocitrate lyase regulation
CXR04_RS03025	SM01007	Class II Aldolase and Adducin N-terminal domain
CXR04_RS03050	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS03110	SM00822	CXR04_RS03110
CXR04_RS03110	SM00825	Beta-ketoacyl synthase
CXR04_RS03110	SM00826	CXR04_RS03110
CXR04_RS03115	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CXR04_RS03185	SM00028	Tetratricopeptide repeats
CXR04_RS03185	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS03185	SM01043	Bacterial transcriptional activator domain
CXR04_RS03195	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS03200	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS03215	SM00960	Roadblock/LC7 domain
CXR04_RS03220	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CXR04_RS03220	SM00387	Histidine kinase-like ATPases
CXR04_RS03255	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS03275	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS03295	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS03360	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CXR04_RS03360	SM00387	Histidine kinase-like ATPases
CXR04_RS03380	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS03380	SM00448	cheY-homologous receiver domain
CXR04_RS03395	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS03400	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS03410	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS03465	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS03525	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS03525	SM00895	CXR04_RS03525
CXR04_RS03705	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS03740	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS03770	SM00923	MbtH-like protein
CXR04_RS03775	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS03780	SM00823	Phosphopantetheine attachment site
CXR04_RS03785	SM00368	Leucine rich repeat, ribonuclease inhibitor type
CXR04_RS03805	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS03810	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS03870	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS03870	SM00448	cheY-homologous receiver domain
CXR04_RS03890	SM00758	CXR04_RS03890
CXR04_RS03890	SM00812	Alpha-L-fucosidase
CXR04_RS03905	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CXR04_RS03930	SM00895	CXR04_RS03930
CXR04_RS03955	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS04070	SM00860	SMI1 / KNR4 family
CXR04_RS04155	SM00470	ParB-like nuclease domain
CXR04_RS04160	SM00448	cheY-homologous receiver domain
CXR04_RS04160	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS04170	SM00998	Adenylosuccinate lyase C-terminus
CXR04_RS04175	SM01230	CXR04_RS04175
CXR04_RS04260	SM00825	Beta-ketoacyl synthase
CXR04_RS04265	SM00825	Beta-ketoacyl synthase
CXR04_RS04315	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS04315	SM01043	Bacterial transcriptional activator domain
CXR04_RS04320	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS04320	SM01043	Bacterial transcriptional activator domain
CXR04_RS04325	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS04325	SM01043	Bacterial transcriptional activator domain
CXR04_RS04345	SM00773	Proposed nucleic acid binding domain
CXR04_RS04370	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
CXR04_RS04380	SM00116	Domain in cystathionine beta-synthase and other proteins.
CXR04_RS04385	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS04385	SM00448	cheY-homologous receiver domain
CXR04_RS04390	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CXR04_RS04390	SM00387	Histidine kinase-like ATPases
CXR04_RS04400	SM00116	Domain in cystathionine beta-synthase and other proteins.
CXR04_RS04425	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS04450	SM00240	Forkhead associated domain
CXR04_RS04455	SM00028	Tetratricopeptide repeats
CXR04_RS04455	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS04485	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS04490	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS04525	SM00448	cheY-homologous receiver domain
CXR04_RS04530	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CXR04_RS04530	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CXR04_RS04530	SM00387	Histidine kinase-like ATPases
CXR04_RS04530	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS04530	SM00448	cheY-homologous receiver domain
CXR04_RS04535	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS04545	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS04670	SM00829	Enoylreductase
CXR04_RS04715	SM00560	LamG-like jellyroll fold domain
CXR04_RS04755	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS04860	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CXR04_RS04860	SM00606	Cellulose Binding Domain Type IV
CXR04_RS04885	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS04915	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS04945	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS04985	SM00849	Metallo-beta-lactamase superfamily
CXR04_RS05065	SM00567	E-Z type HEAT repeats
CXR04_RS05080	SM00829	Enoylreductase
CXR04_RS05115	SM00495	Chitin-binding domain type 3
CXR04_RS05135	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS05135	SM00478	endonuclease III
CXR04_RS05135	SM01009	AlkA N-terminal domain
CXR04_RS05180	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS05180	SM01260	CXR04_RS05180
CXR04_RS05195	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS05200	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS05230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS05230	SM00866	CXR04_RS05230
CXR04_RS05265	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS05280	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS05280	SM00866	CXR04_RS05280
CXR04_RS05320	SM00346	helix_turn_helix isocitrate lyase regulation
CXR04_RS05375	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS05375	SM00448	cheY-homologous receiver domain
CXR04_RS05380	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS05380	SM00448	cheY-homologous receiver domain
CXR04_RS05385	SM00387	Histidine kinase-like ATPases
CXR04_RS05400	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CXR04_RS05400	SM00387	Histidine kinase-like ATPases
CXR04_RS05400	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS05455	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS05455	SM00448	cheY-homologous receiver domain
CXR04_RS05480	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS05525	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CXR04_RS05535	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CXR04_RS05555	SM00344	helix_turn_helix ASNC type
CXR04_RS05585	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS05595	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS05595	SM00895	CXR04_RS05595
CXR04_RS05610	SM00872	Alpha mannosidase, middle domain
CXR04_RS05620	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS05635	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CXR04_RS05635	SM00481	DNA polymerase alpha chain like domain
CXR04_RS05635	SM00483	DNA polymerase X family
CXR04_RS05650	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS05700	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS05710	SM00450	Rhodanese Homology Domain
CXR04_RS05720	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS05760	SM00240	Forkhead associated domain
CXR04_RS05770	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS05785	SM00650	Ribosomal RNA adenine dimethylases
CXR04_RS05790	SM00479	CXR04_RS05790
CXR04_RS05800	SM00479	CXR04_RS05800
CXR04_RS05805	SM00020	Trypsin-like serine protease
CXR04_RS05850	SM00420	helix_turn_helix, Deoxyribose operon repressor
CXR04_RS05850	SM01134	CXR04_RS05850
CXR04_RS05860	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS05880	SM00855	Phosphoglycerate mutase family
CXR04_RS05985	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS05985	SM00448	cheY-homologous receiver domain
CXR04_RS05990	SM00341	Helicase and RNase D C-terminal
CXR04_RS05990	SM00474	3'-5' exonuclease
CXR04_RS06010	SM00861	Transketolase, pyrimidine binding domain
CXR04_RS06020	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS06115	SM01060	CXR04_RS06115
CXR04_RS06135	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS06140	SM00822	CXR04_RS06140
CXR04_RS06195	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS06230	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS06260	SM00062	Bacterial periplasmic substrate-binding proteins
CXR04_RS06265	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS06365	SM00644	CXR04_RS06365
CXR04_RS06365	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
CXR04_RS06370	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS06400	SM00341	Helicase and RNase D C-terminal
CXR04_RS06400	SM00487	DEAD-like helicases superfamily
CXR04_RS06400	SM00490	helicase superfamily c-terminal domain
CXR04_RS06400	SM00956	CXR04_RS06400
CXR04_RS06435	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS06450	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS06450	SM00866	CXR04_RS06450
CXR04_RS06470	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS06490	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS06495	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS06510	SM00849	Metallo-beta-lactamase superfamily
CXR04_RS06600	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS06600	SM00448	cheY-homologous receiver domain
CXR04_RS06610	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS06615	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS06640	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS06645	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS06665	SM01011	Aminopeptidase P, N-terminal domain
CXR04_RS06670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS06670	SM00895	CXR04_RS06670
CXR04_RS06675	SM01130	CXR04_RS06675
CXR04_RS06715	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS06715	SM00448	cheY-homologous receiver domain
CXR04_RS06730	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS06755	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS06755	SM00866	CXR04_RS06755
CXR04_RS06760	SM01230	CXR04_RS06760
CXR04_RS06780	SM00812	Alpha-L-fucosidase
CXR04_RS06785	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS06820	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS06850	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CXR04_RS06850	SM00387	Histidine kinase-like ATPases
CXR04_RS06850	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS06855	SM00448	cheY-homologous receiver domain
CXR04_RS06855	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS06870	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS06900	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS06935	SM00054	EF-hand, calcium binding motif
CXR04_RS06945	SM00632	CXR04_RS06945
CXR04_RS06945	SM00642	Alpha-amylase domain
CXR04_RS06945	SM01065	Starch binding domain
CXR04_RS06995	SM00822	CXR04_RS06995
CXR04_RS07000	SM00822	CXR04_RS07000
CXR04_RS07005	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS07010	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS07020	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS07035	SM00344	helix_turn_helix ASNC type
CXR04_RS07065	SM00822	CXR04_RS07065
CXR04_RS07080	SM01060	CXR04_RS07080
CXR04_RS07095	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS07115	SM00644	CXR04_RS07115
CXR04_RS07190	SM00448	cheY-homologous receiver domain
CXR04_RS07190	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS07195	SM00387	Histidine kinase-like ATPases
CXR04_RS07195	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS07200	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS07205	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS07270	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CXR04_RS07270	SM00387	Histidine kinase-like ATPases
CXR04_RS07270	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS07275	SM00448	cheY-homologous receiver domain
CXR04_RS07275	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS07305	SM00450	Rhodanese Homology Domain
CXR04_RS07325	SM00881	CoA binding domain
CXR04_RS07340	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS07340	SM00895	CXR04_RS07340
CXR04_RS07355	SM00434	DNA Topoisomerase IV
CXR04_RS07375	SM00091	PAS domain
CXR04_RS07375	SM00387	Histidine kinase-like ATPases
CXR04_RS07385	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS07405	SM00642	Alpha-amylase domain
CXR04_RS07410	SM00710	Parallel beta-helix repeats
CXR04_RS07430	SM00020	Trypsin-like serine protease
CXR04_RS07435	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS07450	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS07450	SM00895	CXR04_RS07450
CXR04_RS07480	SM00487	DEAD-like helicases superfamily
CXR04_RS07480	SM00490	helicase superfamily c-terminal domain
CXR04_RS07550	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS07575	SM01006	Siderophore biosynthesis protein domain
CXR04_RS07585	SM00487	DEAD-like helicases superfamily
CXR04_RS07585	SM00491	CXR04_RS07585
CXR04_RS07590	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CXR04_RS07590	SM00954	Region found in RelA / SpoT proteins
CXR04_RS07605	SM00729	Elongator protein 3, MiaB family, Radical SAM
CXR04_RS07650	SM00062	Bacterial periplasmic substrate-binding proteins
CXR04_RS07655	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS07660	SM00448	cheY-homologous receiver domain
CXR04_RS07660	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS07665	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CXR04_RS07665	SM00387	Histidine kinase-like ATPases
CXR04_RS07665	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS07695	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS07700	SM00487	DEAD-like helicases superfamily
CXR04_RS07700	SM00490	helicase superfamily c-terminal domain
CXR04_RS07705	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS07705	SM00448	cheY-homologous receiver domain
CXR04_RS07715	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CXR04_RS07715	SM01232	CXR04_RS07715
CXR04_RS07720	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS07735	SM00729	Elongator protein 3, MiaB family, Radical SAM
CXR04_RS07745	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS07745	SM00843	CXR04_RS07745
CXR04_RS07750	SM00448	cheY-homologous receiver domain
CXR04_RS07755	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CXR04_RS07755	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CXR04_RS07755	SM00387	Histidine kinase-like ATPases
CXR04_RS07755	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS07755	SM00448	cheY-homologous receiver domain
CXR04_RS07760	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CXR04_RS07760	SM00091	PAS domain
CXR04_RS07760	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS07780	SM00849	Metallo-beta-lactamase superfamily
CXR04_RS07785	SM01130	CXR04_RS07785
CXR04_RS07815	SM00316	Ribosomal protein S1-like RNA-binding domain
CXR04_RS07815	SM00322	K homology RNA-binding domain
CXR04_RS07820	SM01387	CXR04_RS07820
CXR04_RS07830	SM00564	beta-propeller repeat
CXR04_RS07835	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS07835	SM00564	beta-propeller repeat
CXR04_RS07840	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS07840	SM00564	beta-propeller repeat
CXR04_RS07845	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS07845	SM00564	beta-propeller repeat
CXR04_RS07870	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS07875	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS07880	SM00904	Riboflavin kinase
CXR04_RS07920	SM00316	Ribosomal protein S1-like RNA-binding domain
CXR04_RS07970	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CXR04_RS07985	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS08025	SM00014	Acid phosphatase homologues
CXR04_RS08065	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS08065	SM01043	Bacterial transcriptional activator domain
CXR04_RS08095	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS08110	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS08120	SM00344	helix_turn_helix ASNC type
CXR04_RS08130	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS08150	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CXR04_RS08150	SM00387	Histidine kinase-like ATPases
CXR04_RS08150	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS08155	SM00448	cheY-homologous receiver domain
CXR04_RS08155	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS08170	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS08180	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS08195	SM00729	Elongator protein 3, MiaB family, Radical SAM
CXR04_RS08250	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS08315	SM00946	Prolyl-tRNA synthetase, C-terminal
CXR04_RS08320	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS08320	SM00962	SRP54-type protein, GTPase domain
CXR04_RS08320	SM00963	SRP54-type protein, helical bundle domain
CXR04_RS08325	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CXR04_RS08330	SM00938	Nitrogen regulatory protein P-II
CXR04_RS08345	SM00943	Bifunctional DNA primase/polymerase, N-terminal
CXR04_RS08350	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS08350	SM00962	SRP54-type protein, GTPase domain
CXR04_RS08350	SM00963	SRP54-type protein, helical bundle domain
CXR04_RS08355	SM00968	SMC proteins Flexible Hinge Domain
CXR04_RS08375	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CXR04_RS08375	SM01232	CXR04_RS08375
CXR04_RS08380	SM00358	Double-stranded RNA binding motif
CXR04_RS08380	SM00535	Ribonuclease III family
CXR04_RS08410	SM00487	DEAD-like helicases superfamily
CXR04_RS08410	SM00490	helicase superfamily c-terminal domain
CXR04_RS08425	SM01120	CXR04_RS08425
CXR04_RS08425	SM01121	CXR04_RS08425
CXR04_RS08465	SM00563	Phosphate acyltransferases
CXR04_RS08480	SM00411	bacterial (prokaryotic) histone like domain
CXR04_RS08500	SM00346	helix_turn_helix isocitrate lyase regulation
CXR04_RS08530	SM00960	Roadblock/LC7 domain
CXR04_RS08535	SM00387	Histidine kinase-like ATPases
CXR04_RS08555	SM00960	Roadblock/LC7 domain
CXR04_RS08560	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CXR04_RS08590	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS08600	SM00917	LeuA allosteric (dimerisation) domain
CXR04_RS08615	SM01329	CXR04_RS08615
CXR04_RS08680	SM00052	Putative diguanylate phosphodiesterase
CXR04_RS08680	SM00091	PAS domain
CXR04_RS08680	SM00267	diguanylate cyclase
CXR04_RS08700	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS08705	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS08715	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS08725	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS08740	SM00845	GatB domain
CXR04_RS08760	SM00052	Putative diguanylate phosphodiesterase
CXR04_RS08760	SM00267	diguanylate cyclase
CXR04_RS08765	SM00292	breast cancer carboxy-terminal domain
CXR04_RS08765	SM00532	Ligase N family
CXR04_RS08775	SM00822	CXR04_RS08775
CXR04_RS08790	SM00644	CXR04_RS08790
CXR04_RS08805	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS08810	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS08915	SM00060	Fibronectin type 3 domain
CXR04_RS08915	SM00636	CXR04_RS08915
CXR04_RS08930	SM01091	Transporter associated domain
CXR04_RS08935	SM00116	Domain in cystathionine beta-synthase and other proteins.
CXR04_RS08950	SM01012	CXR04_RS08950
CXR04_RS08970	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS08970	SM00448	cheY-homologous receiver domain
CXR04_RS08975	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CXR04_RS08975	SM00387	Histidine kinase-like ATPases
CXR04_RS09010	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS09015	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS09020	SM00641	Glycosyl hydrolases family 25
CXR04_RS09045	SM00849	Metallo-beta-lactamase superfamily
CXR04_RS09060	SM00984	UDP binding domain
CXR04_RS09100	SM00091	PAS domain
CXR04_RS09100	SM00387	Histidine kinase-like ATPases
CXR04_RS09105	SM00448	cheY-homologous receiver domain
CXR04_RS09210	SM00829	Enoylreductase
CXR04_RS09225	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS09300	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS09310	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS09320	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS09320	SM00448	cheY-homologous receiver domain
CXR04_RS09345	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS09390	SM00636	CXR04_RS09390
CXR04_RS09395	SM00060	Fibronectin type 3 domain
CXR04_RS09395	SM00636	CXR04_RS09395
CXR04_RS09395	SM00637	CXR04_RS09395
CXR04_RS09410	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS09455	SM00226	Low molecular weight phosphatase family
CXR04_RS09470	SM00937	CXR04_RS09470
CXR04_RS09485	SM00357	Cold shock protein domain
CXR04_RS09485	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS09485	SM00959	Rho termination factor, N-terminal domain
CXR04_RS09510	SM00836	DALR anticodon binding domain
CXR04_RS09510	SM01016	Arginyl tRNA synthetase N terminal dom
CXR04_RS09515	SM00448	cheY-homologous receiver domain
CXR04_RS09580	SM00857	Resolvase, N terminal domain
CXR04_RS09595	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS09635	SM00729	Elongator protein 3, MiaB family, Radical SAM
CXR04_RS09675	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS09680	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS09785	SM01209	CXR04_RS09785
CXR04_RS09930	SM00429	ig-like, plexins, transcription factors
CXR04_RS09945	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS10120	SM01101	CXR04_RS10120
CXR04_RS10145	SM00487	DEAD-like helicases superfamily
CXR04_RS10155	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
CXR04_RS10165	SM00422	helix_turn_helix, mercury resistance
CXR04_RS10180	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS10230	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CXR04_RS10250	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS10260	SM00752	Horizontally Transferred TransMembrane Domain
CXR04_RS10280	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS10325	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS10340	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS10345	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS10355	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS10380	SM00861	Transketolase, pyrimidine binding domain
CXR04_RS10425	SM00878	Biotin carboxylase C-terminal domain
CXR04_RS10520	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS10520	SM01043	Bacterial transcriptional activator domain
CXR04_RS10525	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS10525	SM00448	cheY-homologous receiver domain
CXR04_RS10530	SM00387	Histidine kinase-like ATPases
CXR04_RS10550	SM00422	helix_turn_helix, mercury resistance
CXR04_RS10570	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS10600	SM01130	CXR04_RS10600
CXR04_RS10605	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CXR04_RS10620	SM00829	Enoylreductase
CXR04_RS10625	SM00363	S4 RNA-binding domain
CXR04_RS10675	SM00028	Tetratricopeptide repeats
CXR04_RS10680	SM00829	Enoylreductase
CXR04_RS10730	SM00960	Roadblock/LC7 domain
CXR04_RS10750	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS10755	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS10755	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS10760	SM00641	Glycosyl hydrolases family 25
CXR04_RS10790	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS10790	SM00464	Found in ATP-dependent protease La (LON)
CXR04_RS10800	SM00448	cheY-homologous receiver domain
CXR04_RS10800	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS10805	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CXR04_RS10805	SM00387	Histidine kinase-like ATPases
CXR04_RS10805	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS10810	SM00861	Transketolase, pyrimidine binding domain
CXR04_RS10835	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS10870	SM00060	Fibronectin type 3 domain
CXR04_RS10875	SM00829	Enoylreductase
CXR04_RS10880	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS10890	SM00062	Bacterial periplasmic substrate-binding proteins
CXR04_RS10895	SM00919	Malic enzyme, NAD binding domain
CXR04_RS10895	SM01274	CXR04_RS10895
CXR04_RS10950	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS10975	SM00644	CXR04_RS10975
CXR04_RS10975	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
CXR04_RS11025	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CXR04_RS11035	SM00387	Histidine kinase-like ATPases
CXR04_RS11045	SM00822	CXR04_RS11045
CXR04_RS11075	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS11075	SM00866	CXR04_RS11075
CXR04_RS11125	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CXR04_RS11130	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CXR04_RS11185	SM00116	Domain in cystathionine beta-synthase and other proteins.
CXR04_RS11200	SM00671	Sel1-like repeats.
CXR04_RS11220	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CXR04_RS11275	SM00341	Helicase and RNase D C-terminal
CXR04_RS11325	SM00450	Rhodanese Homology Domain
CXR04_RS11385	SM00487	DEAD-like helicases superfamily
CXR04_RS11385	SM00490	helicase superfamily c-terminal domain
CXR04_RS11395	SM00422	helix_turn_helix, mercury resistance
CXR04_RS11405	SM00481	DNA polymerase alpha chain like domain
CXR04_RS11450	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CXR04_RS11535	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS11540	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS11590	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS11595	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS11615	SM00838	Elongation factor G C-terminus
CXR04_RS11665	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CXR04_RS11665	SM00091	PAS domain
CXR04_RS11665	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS11680	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS11680	SM00866	CXR04_RS11680
CXR04_RS11685	SM00116	Domain in cystathionine beta-synthase and other proteins.
CXR04_RS11685	SM00924	MgtE intracellular N domain
CXR04_RS11690	SM00636	CXR04_RS11690
CXR04_RS11700	SM00422	helix_turn_helix, mercury resistance
CXR04_RS11710	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS11735	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS11745	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS11750	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS11770	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS11775	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS11810	SM00346	helix_turn_helix isocitrate lyase regulation
CXR04_RS11835	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CXR04_RS11885	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS11885	SM00448	cheY-homologous receiver domain
CXR04_RS11890	SM00450	Rhodanese Homology Domain
CXR04_RS11905	SM00450	Rhodanese Homology Domain
CXR04_RS11905	SM00849	Metallo-beta-lactamase superfamily
CXR04_RS11920	SM00257	Lysin motif
CXR04_RS11995	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS12025	SM00020	Trypsin-like serine protease
CXR04_RS12025	SM00191	Integrin alpha (beta-propellor repeats).
CXR04_RS12055	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
CXR04_RS12135	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS12150	SM00244	prohibitin homologues
CXR04_RS12165	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS12190	SM00670	Large family of predicted nucleotide-binding domains
CXR04_RS12285	SM00858	CXR04_RS12285
CXR04_RS12295	SM00060	Fibronectin type 3 domain
CXR04_RS12295	SM00636	CXR04_RS12295
CXR04_RS12305	SM00631	CXR04_RS12305
CXR04_RS12315	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS12325	SM00346	helix_turn_helix isocitrate lyase regulation
CXR04_RS12330	SM01119	CXR04_RS12330
CXR04_RS12380	SM00028	Tetratricopeptide repeats
CXR04_RS12380	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS12410	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS12465	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CXR04_RS12470	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS12475	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS12495	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS12520	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CXR04_RS12520	SM00267	diguanylate cyclase
CXR04_RS12525	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CXR04_RS12555	SM00878	Biotin carboxylase C-terminal domain
CXR04_RS12600	SM01133	CXR04_RS12600
CXR04_RS12620	SM00448	cheY-homologous receiver domain
CXR04_RS12620	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS12625	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CXR04_RS12625	SM00387	Histidine kinase-like ATPases
CXR04_RS12625	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS12680	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS12700	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CXR04_RS12740	SM00191	Integrin alpha (beta-propellor repeats).
CXR04_RS12740	SM00644	CXR04_RS12740
CXR04_RS12740	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
CXR04_RS12785	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS12860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CXR04_RS12860	SM00387	Histidine kinase-like ATPases
CXR04_RS12860	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS12950	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS12980	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS13000	SM00798	AICARFT/IMPCHase bienzyme
CXR04_RS13000	SM00851	MGS-like domain
CXR04_RS13025	SM00881	CoA binding domain
CXR04_RS13090	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS13090	SM00448	cheY-homologous receiver domain
CXR04_RS13125	SM00830	Chorismate mutase type II
CXR04_RS13170	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS13185	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS13190	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS13200	SM00984	UDP binding domain
CXR04_RS13225	SM01240	CXR04_RS13225
CXR04_RS13230	SM00116	Domain in cystathionine beta-synthase and other proteins.
CXR04_RS13230	SM01240	CXR04_RS13230
CXR04_RS13240	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS13240	SM00448	cheY-homologous receiver domain
CXR04_RS13275	SM00883	Chaperonin 10 Kd subunit
CXR04_RS13360	SM01005	Alanine racemase, C-terminal domain
CXR04_RS13410	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS13440	SM00662	RNA polymerases D
CXR04_RS13445	SM00363	S4 RNA-binding domain
CXR04_RS13445	SM01390	CXR04_RS13445
CXR04_RS13465	SM00316	Ribosomal protein S1-like RNA-binding domain
CXR04_RS13530	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CXR04_RS13535	SM01374	CXR04_RS13535
CXR04_RS13555	SM00322	K homology RNA-binding domain
CXR04_RS13570	SM01382	CXR04_RS13570
CXR04_RS13570	SM01383	CXR04_RS13570
CXR04_RS13590	SM01403	CXR04_RS13590
CXR04_RS13640	SM00838	Elongation factor G C-terminus
CXR04_RS13640	SM00889	Elongation factor G, domain IV
CXR04_RS13660	SM00663	RNA polymerase I subunit A N-terminus
CXR04_RS13700	SM00649	Ribosomal protein L11/L12
CXR04_RS13705	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CXR04_RS13705	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CXR04_RS13765	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS13765	SM00448	cheY-homologous receiver domain
CXR04_RS13785	SM00429	ig-like, plexins, transcription factors
CXR04_RS13815	SM00822	CXR04_RS13815
CXR04_RS13815	SM00823	Phosphopantetheine attachment site
CXR04_RS13815	SM00825	Beta-ketoacyl synthase
CXR04_RS13815	SM00826	CXR04_RS13815
CXR04_RS13815	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CXR04_RS13815	SM00829	Enoylreductase
CXR04_RS13820	SM00825	Beta-ketoacyl synthase
CXR04_RS13855	SM01043	Bacterial transcriptional activator domain
CXR04_RS13865	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS13895	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS13910	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS13975	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS14060	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS14060	SM00448	cheY-homologous receiver domain
CXR04_RS14165	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CXR04_RS14165	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CXR04_RS14170	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CXR04_RS14220	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS14230	SM00357	Cold shock protein domain
CXR04_RS14280	SM00857	Resolvase, N terminal domain
CXR04_RS14295	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS14305	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS14350	SM00344	helix_turn_helix ASNC type
CXR04_RS14405	SM00422	helix_turn_helix, mercury resistance
CXR04_RS14445	SM00357	Cold shock protein domain
CXR04_RS14450	SM00487	DEAD-like helicases superfamily
CXR04_RS14450	SM00490	helicase superfamily c-terminal domain
CXR04_RS14495	SM00855	Phosphoglycerate mutase family
CXR04_RS14540	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS14555	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS14590	SM00855	Phosphoglycerate mutase family
CXR04_RS14615	SM00836	DALR anticodon binding domain
CXR04_RS14615	SM01016	Arginyl tRNA synthetase N terminal dom
CXR04_RS14630	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS14650	SM01004	Delta-aminolevulinic acid dehydratase
CXR04_RS14670	SM00881	CoA binding domain
CXR04_RS14695	SM00563	Phosphate acyltransferases
CXR04_RS14705	SM01155	CXR04_RS14705
CXR04_RS14740	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS14750	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS14765	SM00776	CXR04_RS14765
CXR04_RS14810	SM00487	DEAD-like helicases superfamily
CXR04_RS14840	SM00487	DEAD-like helicases superfamily
CXR04_RS14840	SM00490	helicase superfamily c-terminal domain
CXR04_RS14870	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS14895	SM00960	Roadblock/LC7 domain
CXR04_RS14900	SM00387	Histidine kinase-like ATPases
CXR04_RS14945	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS14955	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS15005	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS15045	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS15095	SM00357	Cold shock protein domain
CXR04_RS15175	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CXR04_RS15175	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CXR04_RS15175	SM00091	PAS domain
CXR04_RS15175	SM00267	diguanylate cyclase
CXR04_RS15180	SM00903	Flavin reductase like domain
CXR04_RS15210	SM00829	Enoylreductase
CXR04_RS15220	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS15235	SM00495	Chitin-binding domain type 3
CXR04_RS15240	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CXR04_RS15285	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS15315	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS15350	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS15350	SM01043	Bacterial transcriptional activator domain
CXR04_RS15390	SM00028	Tetratricopeptide repeats
CXR04_RS15395	SM00028	Tetratricopeptide repeats
CXR04_RS15395	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS15395	SM01043	Bacterial transcriptional activator domain
CXR04_RS15405	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS15430	SM00560	LamG-like jellyroll fold domain
CXR04_RS15435	SM00487	DEAD-like helicases superfamily
CXR04_RS15435	SM00490	helicase superfamily c-terminal domain
CXR04_RS15455	SM00776	CXR04_RS15455
CXR04_RS15470	SM00344	helix_turn_helix ASNC type
CXR04_RS15490	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CXR04_RS15490	SM00606	Cellulose Binding Domain Type IV
CXR04_RS15515	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS15600	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS15600	SM00895	CXR04_RS15600
CXR04_RS15620	SM00060	Fibronectin type 3 domain
CXR04_RS15620	SM01067	Cellulose binding domain
CXR04_RS15640	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS15670	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS15670	SM00487	DEAD-like helicases superfamily
CXR04_RS15670	SM00490	helicase superfamily c-terminal domain
CXR04_RS15670	SM00847	Helicase associated domain (HA2)  Add an annotation
CXR04_RS15695	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CXR04_RS15735	SM00422	helix_turn_helix, mercury resistance
CXR04_RS15770	SM01211	CXR04_RS15770
CXR04_RS15795	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS15810	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS15810	SM00448	cheY-homologous receiver domain
CXR04_RS15820	SM00478	endonuclease III
CXR04_RS15820	SM00525	CXR04_RS15820
CXR04_RS15830	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS15845	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS15845	SM01086	C-terminal, D2-small domain, of ClpB protein
CXR04_RS15910	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS15915	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS15915	SM00448	cheY-homologous receiver domain
CXR04_RS15935	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS15985	SM00905	Dihydroneopterin aldolase
CXR04_RS16005	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS16040	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS16080	SM00014	Acid phosphatase homologues
CXR04_RS16165	SM00387	Histidine kinase-like ATPases
CXR04_RS16175	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS16175	SM00448	cheY-homologous receiver domain
CXR04_RS16190	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS16205	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS16230	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS16245	SM00014	Acid phosphatase homologues
CXR04_RS16285	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS16330	SM01209	CXR04_RS16330
CXR04_RS16330	SM01210	CXR04_RS16330
CXR04_RS16350	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS16350	SM00895	CXR04_RS16350
CXR04_RS16355	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS16365	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS16370	SM00788	Adenylosuccinate synthetase
CXR04_RS16400	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS16480	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS16480	SM01086	C-terminal, D2-small domain, of ClpB protein
CXR04_RS16490	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS16495	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS16500	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS16505	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS16515	SM00422	helix_turn_helix, mercury resistance
CXR04_RS16520	SM00271	DnaJ molecular chaperone homology domain
CXR04_RS16540	SM00191	Integrin alpha (beta-propellor repeats).
CXR04_RS16545	SM00191	Integrin alpha (beta-propellor repeats).
CXR04_RS16550	SM00191	Integrin alpha (beta-propellor repeats).
CXR04_RS16670	SM00028	Tetratricopeptide repeats
CXR04_RS16750	SM00116	Domain in cystathionine beta-synthase and other proteins.
CXR04_RS16830	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS16900	SM00116	Domain in cystathionine beta-synthase and other proteins.
CXR04_RS16900	SM01091	Transporter associated domain
CXR04_RS16910	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS16910	SM00448	cheY-homologous receiver domain
CXR04_RS16930	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS16930	SM01043	Bacterial transcriptional activator domain
CXR04_RS16940	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS16945	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS16960	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS16995	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS16995	SM00895	CXR04_RS16995
CXR04_RS17010	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS17025	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS17050	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS17115	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS17155	SM00860	SMI1 / KNR4 family
CXR04_RS17185	SM00244	prohibitin homologues
CXR04_RS17190	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS17215	SM00822	CXR04_RS17215
CXR04_RS17220	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS17225	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS17280	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS17285	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS17285	SM00895	CXR04_RS17285
CXR04_RS17320	SM00960	Roadblock/LC7 domain
CXR04_RS17325	SM00387	Histidine kinase-like ATPases
CXR04_RS17400	SM00422	helix_turn_helix, mercury resistance
CXR04_RS17410	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS17425	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CXR04_RS17425	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS17430	SM00422	helix_turn_helix, mercury resistance
CXR04_RS17465	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS17490	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS17505	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS17545	SM00495	Chitin-binding domain type 3
CXR04_RS17580	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS17580	SM01086	C-terminal, D2-small domain, of ClpB protein
CXR04_RS17585	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS17625	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS17665	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS17680	SM00448	cheY-homologous receiver domain
CXR04_RS17680	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS17700	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS17715	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CXR04_RS17715	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS17750	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS17785	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS17785	SM00895	CXR04_RS17785
CXR04_RS17795	SM00861	Transketolase, pyrimidine binding domain
CXR04_RS17805	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS17805	SM00448	cheY-homologous receiver domain
CXR04_RS17810	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS17815	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS17835	SM00829	Enoylreductase
CXR04_RS17860	SM00861	Transketolase, pyrimidine binding domain
CXR04_RS17870	SM00344	helix_turn_helix ASNC type
CXR04_RS17890	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CXR04_RS17895	SM00752	Horizontally Transferred TransMembrane Domain
CXR04_RS17930	SM00450	Rhodanese Homology Domain
CXR04_RS17950	SM00240	Forkhead associated domain
CXR04_RS17955	SM00240	Forkhead associated domain
CXR04_RS17960	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS17960	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CXR04_RS17975	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS17975	SM00740	CXR04_RS17975
CXR04_RS18030	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS18040	SM00327	von Willebrand factor (vWF) type A domain
CXR04_RS18060	SM00434	DNA Topoisomerase IV
CXR04_RS18065	SM00387	Histidine kinase-like ATPases
CXR04_RS18065	SM00433	TopoisomeraseII
CXR04_RS18080	SM01350	CXR04_RS18080
CXR04_RS18085	SM00480	DNA polymerase III beta subunit
CXR04_RS18090	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS18090	SM00760	Bacterial dnaA protein helix-turn-helix domain
CXR04_RS18110	SM01234	CXR04_RS18110
CXR04_RS18120	SM00393	Putative single-stranded nucleic acids-binding domain
CXR04_RS18135	SM00470	ParB-like nuclease domain
CXR04_RS18180	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CXR04_RS18250	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
CXR04_RS18295	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS18305	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS18315	SM00822	CXR04_RS18315
CXR04_RS18320	SM00422	helix_turn_helix, mercury resistance
CXR04_RS18330	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CXR04_RS18375	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CXR04_RS18375	SM00387	Histidine kinase-like ATPases
CXR04_RS18380	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS18400	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS18440	SM00226	Low molecular weight phosphatase family
CXR04_RS18495	SM00327	von Willebrand factor (vWF) type A domain
CXR04_RS18510	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS18525	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS18575	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS18575	SM00448	cheY-homologous receiver domain
CXR04_RS18585	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS18615	SM00873	B3/4 domain
CXR04_RS18715	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS18730	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS18750	SM00448	cheY-homologous receiver domain
CXR04_RS18750	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS18755	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CXR04_RS18755	SM00387	Histidine kinase-like ATPases
CXR04_RS18755	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS18760	SM01011	Aminopeptidase P, N-terminal domain
CXR04_RS18765	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS18770	SM00943	Bifunctional DNA primase/polymerase, N-terminal
CXR04_RS18790	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CXR04_RS18825	SM00942	Primase C terminal 1 (PriCT-1)
CXR04_RS18825	SM00943	Bifunctional DNA primase/polymerase, N-terminal
CXR04_RS18850	SM00091	PAS domain
CXR04_RS18870	SM00860	SMI1 / KNR4 family
CXR04_RS18875	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS18895	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS18930	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS18930	SM00866	CXR04_RS18930
CXR04_RS19065	SM00244	prohibitin homologues
CXR04_RS19070	SM00244	prohibitin homologues
CXR04_RS19100	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS19105	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS19150	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS19220	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS19295	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS19310	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS19355	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS19395	SM00327	von Willebrand factor (vWF) type A domain
CXR04_RS19410	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS19425	SM00448	cheY-homologous receiver domain
CXR04_RS19425	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS19430	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CXR04_RS19430	SM00387	Histidine kinase-like ATPases
CXR04_RS19430	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS19435	SM00357	Cold shock protein domain
CXR04_RS19450	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS19470	SM00825	Beta-ketoacyl synthase
CXR04_RS19475	SM00825	Beta-ketoacyl synthase
CXR04_RS19490	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS19500	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS19515	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS19555	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS19565	SM00493	CXR04_RS19565
CXR04_RS19690	SM00255	Toll - interleukin 1 - resistance
CXR04_RS19700	SM00255	Toll - interleukin 1 - resistance
CXR04_RS19710	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS19710	SM00487	DEAD-like helicases superfamily
CXR04_RS19710	SM00490	helicase superfamily c-terminal domain
CXR04_RS19715	SM00487	DEAD-like helicases superfamily
CXR04_RS19715	SM00490	helicase superfamily c-terminal domain
CXR04_RS19730	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS19750	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS19775	SM00327	von Willebrand factor (vWF) type A domain
CXR04_RS19785	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS19845	SM00849	Metallo-beta-lactamase superfamily
CXR04_RS19850	SM00100	Cyclic nucleotide-monophosphate binding domain
CXR04_RS19850	SM00419	helix_turn_helix, cAMP Regulatory protein
CXR04_RS19855	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS19865	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS19865	SM01043	Bacterial transcriptional activator domain
CXR04_RS19890	SM00829	Enoylreductase
CXR04_RS19895	SM00244	prohibitin homologues
CXR04_RS19905	SM00478	endonuclease III
CXR04_RS19905	SM00525	CXR04_RS19905
CXR04_RS19940	SM00947	Carbonic anhydrase
CXR04_RS20005	SM00487	DEAD-like helicases superfamily
CXR04_RS20005	SM00490	helicase superfamily c-terminal domain
CXR04_RS20045	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CXR04_RS20045	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CXR04_RS20045	SM00493	CXR04_RS20045
CXR04_RS20080	SM00062	Bacterial periplasmic substrate-binding proteins
CXR04_RS20095	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS20105	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CXR04_RS20255	SM01260	CXR04_RS20255
CXR04_RS20285	SM00487	DEAD-like helicases superfamily
CXR04_RS20320	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CXR04_RS20325	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CXR04_RS20340	SM00422	helix_turn_helix, mercury resistance
CXR04_RS20355	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS20380	SM00100	Cyclic nucleotide-monophosphate binding domain
CXR04_RS20380	SM00419	helix_turn_helix, cAMP Regulatory protein
CXR04_RS20385	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS20400	SM00028	Tetratricopeptide repeats
CXR04_RS20460	SM01236	CXR04_RS20460
CXR04_RS20520	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS20545	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CXR04_RS20545	SM00606	Cellulose Binding Domain Type IV
CXR04_RS20550	SM00257	Lysin motif
CXR04_RS20595	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS20600	SM00857	Resolvase, N terminal domain
CXR04_RS20645	SM00448	cheY-homologous receiver domain
CXR04_RS20645	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS20650	SM00387	Histidine kinase-like ATPases
CXR04_RS20650	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS20660	SM00100	Cyclic nucleotide-monophosphate binding domain
CXR04_RS20690	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS20700	SM00116	Domain in cystathionine beta-synthase and other proteins.
CXR04_RS20710	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS20740	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS20755	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS20795	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS20805	SM00248	ankyrin repeats
CXR04_RS20820	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS20825	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS20905	SM00450	Rhodanese Homology Domain
CXR04_RS20925	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS20930	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS20945	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS20950	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS20980	SM00448	cheY-homologous receiver domain
CXR04_RS20980	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS20985	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CXR04_RS20985	SM00387	Histidine kinase-like ATPases
CXR04_RS20985	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS21065	SM00855	Phosphoglycerate mutase family
CXR04_RS21075	SM00387	Histidine kinase-like ATPases
CXR04_RS21075	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS21080	SM00448	cheY-homologous receiver domain
CXR04_RS21080	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS21095	SM01058	CarD-like/TRCF domain
CXR04_RS21115	SM00840	CXR04_RS21115
CXR04_RS21120	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CXR04_RS21140	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS21215	SM01130	CXR04_RS21215
CXR04_RS21255	SM00420	helix_turn_helix, Deoxyribose operon repressor
CXR04_RS21255	SM01134	CXR04_RS21255
CXR04_RS21320	SM00487	DEAD-like helicases superfamily
CXR04_RS21320	SM00490	helicase superfamily c-terminal domain
CXR04_RS21330	SM00422	helix_turn_helix, mercury resistance
CXR04_RS21330	SM00871	Bacterial transcription activator, effector binding domain
CXR04_RS21365	SM00357	Cold shock protein domain
CXR04_RS21400	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS21445	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS21470	SM00633	Glycosyl hydrolase family 10
CXR04_RS21470	SM00637	CXR04_RS21470
CXR04_RS21495	SM00878	Biotin carboxylase C-terminal domain
CXR04_RS21525	SM00091	PAS domain
CXR04_RS21530	SM00529	Helix-turn-helix diphteria tox regulatory element
CXR04_RS21530	SM00899	CXR04_RS21530
CXR04_RS21545	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS21625	SM01043	Bacterial transcriptional activator domain
CXR04_RS21635	SM00943	Bifunctional DNA primase/polymerase, N-terminal
CXR04_RS21680	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS21695	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS21705	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS21720	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS21800	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS21800	SM00564	beta-propeller repeat
CXR04_RS21825	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS21840	SM00028	Tetratricopeptide repeats
CXR04_RS21840	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS21840	SM01043	Bacterial transcriptional activator domain
CXR04_RS21855	SM00028	Tetratricopeptide repeats
CXR04_RS21855	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS21855	SM01043	Bacterial transcriptional activator domain
CXR04_RS21860	SM00481	DNA polymerase alpha chain like domain
CXR04_RS21875	SM00729	Elongator protein 3, MiaB family, Radical SAM
CXR04_RS21880	SM00028	Tetratricopeptide repeats
CXR04_RS21910	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS21965	SM00422	helix_turn_helix, mercury resistance
CXR04_RS22000	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS22045	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS22095	SM00710	Parallel beta-helix repeats
CXR04_RS22130	SM00822	CXR04_RS22130
CXR04_RS22180	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS22310	SM00834	Putative regulatory protein
CXR04_RS22340	SM00852	Probable molybdopterin binding domain
CXR04_RS22350	SM00852	Probable molybdopterin binding domain
CXR04_RS22385	SM00642	Alpha-amylase domain
CXR04_RS22395	SM01217	CXR04_RS22395
CXR04_RS22425	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS22445	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS22515	SM00422	helix_turn_helix, mercury resistance
CXR04_RS22530	SM00822	CXR04_RS22530
CXR04_RS22540	SM00245	tail specific protease
CXR04_RS22595	SM00650	Ribosomal RNA adenine dimethylases
CXR04_RS22605	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS22645	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS22650	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS22650	SM00448	cheY-homologous receiver domain
CXR04_RS22655	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS22700	SM01400	CXR04_RS22700
CXR04_RS22735	SM00860	SMI1 / KNR4 family
CXR04_RS22760	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS22770	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS22785	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS22790	SM00487	DEAD-like helicases superfamily
CXR04_RS22790	SM00490	helicase superfamily c-terminal domain
CXR04_RS22790	SM00982	CXR04_RS22790
CXR04_RS22790	SM01058	CarD-like/TRCF domain
CXR04_RS22830	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS22835	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS22895	SM00257	Lysin motif
CXR04_RS22900	SM00257	Lysin motif
CXR04_RS22905	SM01192	CXR04_RS22905
CXR04_RS22905	SM01193	CXR04_RS22905
CXR04_RS22940	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS22940	SM00866	CXR04_RS22940
CXR04_RS22955	SM00828	Methyltransferase  in polyketide synthase (PKS) enzymes.
CXR04_RS22980	SM00116	Domain in cystathionine beta-synthase and other proteins.
CXR04_RS23015	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS23110	SM00448	cheY-homologous receiver domain
CXR04_RS23110	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS23115	SM00387	Histidine kinase-like ATPases
CXR04_RS23115	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS23130	SM01001	AIR carboxylase
CXR04_RS23150	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS23160	SM00257	Lysin motif
CXR04_RS23165	SM00984	UDP binding domain
CXR04_RS23185	SM00644	CXR04_RS23185
CXR04_RS23185	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
CXR04_RS23295	SM00996	S-adenosyl-L-homocysteine hydrolase
CXR04_RS23295	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CXR04_RS23325	SM00448	cheY-homologous receiver domain
CXR04_RS23325	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS23330	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CXR04_RS23330	SM00387	Histidine kinase-like ATPases
CXR04_RS23330	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS23350	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS23350	SM00448	cheY-homologous receiver domain
CXR04_RS23370	SM00957	SecA DEAD-like domain
CXR04_RS23370	SM00958	SecA preprotein cross-linking domain
CXR04_RS23440	SM00240	Forkhead associated domain
CXR04_RS23445	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS23450	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS23455	SM00937	CXR04_RS23455
CXR04_RS23470	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS23480	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CXR04_RS23480	SM00245	tail specific protease
CXR04_RS23500	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS23505	SM00100	Cyclic nucleotide-monophosphate binding domain
CXR04_RS23505	SM00419	helix_turn_helix, cAMP Regulatory protein
CXR04_RS23555	SM00606	Cellulose Binding Domain Type IV
CXR04_RS23555	SM01217	CXR04_RS23555
CXR04_RS23560	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS23585	SM00829	Enoylreductase
CXR04_RS23630	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS23650	SM00919	Malic enzyme, NAD binding domain
CXR04_RS23650	SM01274	CXR04_RS23650
CXR04_RS23660	SM00411	bacterial (prokaryotic) histone like domain
CXR04_RS23695	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CXR04_RS23700	SM00429	ig-like, plexins, transcription factors
CXR04_RS23710	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS23730	SM00429	ig-like, plexins, transcription factors
CXR04_RS23735	SM00429	ig-like, plexins, transcription factors
CXR04_RS23740	SM00487	DEAD-like helicases superfamily
CXR04_RS23760	SM00060	Fibronectin type 3 domain
CXR04_RS23780	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS23805	SM00344	helix_turn_helix ASNC type
CXR04_RS23815	SM00346	helix_turn_helix isocitrate lyase regulation
CXR04_RS23820	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS23895	SM00232	JAB/MPN domain
CXR04_RS23905	SM00849	Metallo-beta-lactamase superfamily
CXR04_RS23970	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS23995	SM00883	Chaperonin 10 Kd subunit
CXR04_RS24035	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS24050	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS24065	SM00062	Bacterial periplasmic substrate-binding proteins
CXR04_RS24095	SM00052	Putative diguanylate phosphodiesterase
CXR04_RS24095	SM00267	diguanylate cyclase
CXR04_RS24160	SM00448	cheY-homologous receiver domain
CXR04_RS24160	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS24165	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CXR04_RS24165	SM00387	Histidine kinase-like ATPases
CXR04_RS24165	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS24190	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS24195	SM00060	Fibronectin type 3 domain
CXR04_RS24195	SM01067	Cellulose binding domain
CXR04_RS24200	SM00637	CXR04_RS24200
CXR04_RS24225	SM00631	CXR04_RS24225
CXR04_RS24235	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS24240	SM00479	CXR04_RS24240
CXR04_RS24270	SM01006	Siderophore biosynthesis protein domain
CXR04_RS24315	SM00878	Biotin carboxylase C-terminal domain
CXR04_RS24365	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS24400	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS24405	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS24465	SM00327	von Willebrand factor (vWF) type A domain
CXR04_RS24510	SM00116	Domain in cystathionine beta-synthase and other proteins.
CXR04_RS24520	SM00867	YceI-like domain 
CXR04_RS24525	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS24555	SM00387	Histidine kinase-like ATPases
CXR04_RS24560	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS24560	SM00448	cheY-homologous receiver domain
CXR04_RS24575	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS24575	SM01043	Bacterial transcriptional activator domain
CXR04_RS24615	SM00458	Ricin-type beta-trefoil
CXR04_RS24630	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS24645	SM00998	Adenylosuccinate lyase C-terminus
CXR04_RS24665	SM00116	Domain in cystathionine beta-synthase and other proteins.
CXR04_RS24665	SM00924	MgtE intracellular N domain
CXR04_RS24710	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS24725	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS24750	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS24770	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS24790	SM00327	von Willebrand factor (vWF) type A domain
CXR04_RS24795	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS24795	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CXR04_RS24800	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS24810	SM00062	Bacterial periplasmic substrate-binding proteins
CXR04_RS24820	SM00507	HNH nucleases
CXR04_RS24875	SM00812	Alpha-L-fucosidase
CXR04_RS24920	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CXR04_RS24970	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CXR04_RS24970	SM01232	CXR04_RS24970
CXR04_RS24975	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS24985	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS25030	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS25030	SM00994	ClpX C4-type zinc finger
CXR04_RS25030	SM01086	C-terminal, D2-small domain, of ClpB protein
CXR04_RS25060	SM00562	CXR04_RS25060
CXR04_RS25095	SM00880	CXR04_RS25095
CXR04_RS25095	SM01118	CXR04_RS25095
CXR04_RS25100	SM00729	Elongator protein 3, MiaB family, Radical SAM
CXR04_RS25135	SM00316	Ribosomal protein S1-like RNA-binding domain
CXR04_RS25165	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CXR04_RS25215	SM00855	Phosphoglycerate mutase family
CXR04_RS25225	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS25260	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CXR04_RS25265	SM00849	Metallo-beta-lactamase superfamily
CXR04_RS25270	SM00867	YceI-like domain 
CXR04_RS25290	SM00838	Elongation factor G C-terminus
CXR04_RS25300	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS25305	SM00729	Elongator protein 3, MiaB family, Radical SAM
CXR04_RS25320	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS25330	SM00849	Metallo-beta-lactamase superfamily
CXR04_RS25340	SM00271	DnaJ molecular chaperone homology domain
CXR04_RS25395	SM00116	Domain in cystathionine beta-synthase and other proteins.
CXR04_RS25395	SM01091	Transporter associated domain
CXR04_RS25430	SM00917	LeuA allosteric (dimerisation) domain
CXR04_RS25455	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS25455	SM00448	cheY-homologous receiver domain
CXR04_RS25460	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS25460	SM00895	CXR04_RS25460
CXR04_RS25465	SM00282	Laminin G domain
CXR04_RS25465	SM00560	LamG-like jellyroll fold domain
CXR04_RS25490	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS25525	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS25525	SM01043	Bacterial transcriptional activator domain
CXR04_RS25535	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS25545	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS25600	SM00710	Parallel beta-helix repeats
CXR04_RS25605	SM00710	Parallel beta-helix repeats
CXR04_RS25625	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS25625	SM00320	WD40 repeats
CXR04_RS25640	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CXR04_RS25675	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CXR04_RS25700	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS25750	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS25750	SM01043	Bacterial transcriptional activator domain
CXR04_RS25755	SM00984	UDP binding domain
CXR04_RS25785	SM00400	zinc finger
CXR04_RS25785	SM00493	CXR04_RS25785
CXR04_RS25785	SM00766	DNA primase DnaG DnaB-binding
CXR04_RS25800	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS25820	SM00642	Alpha-amylase domain
CXR04_RS25830	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS25895	SM00849	Metallo-beta-lactamase superfamily
CXR04_RS25900	SM00829	Enoylreductase
CXR04_RS25965	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS25975	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS26105	SM00226	Low molecular weight phosphatase family
CXR04_RS26115	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS26135	SM00644	CXR04_RS26135
CXR04_RS26190	SM00829	Enoylreductase
CXR04_RS26270	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CXR04_RS26270	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS26280	SM00346	helix_turn_helix isocitrate lyase regulation
CXR04_RS26315	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS26350	SM00825	Beta-ketoacyl synthase
CXR04_RS26365	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CXR04_RS26380	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS26400	SM00966	SpoVT / AbrB like domain 
CXR04_RS26430	SM00422	helix_turn_helix, mercury resistance
CXR04_RS26495	SM00834	Putative regulatory protein
CXR04_RS26525	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS26525	SM01043	Bacterial transcriptional activator domain
CXR04_RS26565	SM00984	UDP binding domain
CXR04_RS26595	SM00849	Metallo-beta-lactamase superfamily
CXR04_RS26635	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS26705	SM00248	ankyrin repeats
CXR04_RS26720	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS26725	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS26735	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS26785	SM00646	CXR04_RS26785
CXR04_RS26800	SM00854	Bacterial capsule synthesis protein PGA_cap
CXR04_RS26825	SM00855	Phosphoglycerate mutase family
CXR04_RS26850	SM00710	Parallel beta-helix repeats
CXR04_RS26855	SM00636	CXR04_RS26855
CXR04_RS26880	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS26890	SM00422	helix_turn_helix, mercury resistance
CXR04_RS26920	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS26930	SM00422	helix_turn_helix, mercury resistance
CXR04_RS26940	SM00955	CXR04_RS26940
CXR04_RS26970	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS26995	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
CXR04_RS27060	SM00943	Bifunctional DNA primase/polymerase, N-terminal
CXR04_RS27115	SM00813	Alpha-L-arabinofuranosidase C-terminus
CXR04_RS27135	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS27200	SM00422	helix_turn_helix, mercury resistance
CXR04_RS27280	SM01230	CXR04_RS27280
CXR04_RS27295	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS27295	SM00448	cheY-homologous receiver domain
CXR04_RS27305	SM01230	CXR04_RS27305
CXR04_RS27325	SM00191	Integrin alpha (beta-propellor repeats).
CXR04_RS27335	SM00986	Uracil DNA glycosylase superfamily
CXR04_RS27335	SM00987	UreE urease accessory protein, C-terminal domain 
CXR04_RS27345	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS27400	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS27420	SM00822	CXR04_RS27420
CXR04_RS27420	SM00823	Phosphopantetheine attachment site
CXR04_RS27420	SM00825	Beta-ketoacyl synthase
CXR04_RS27420	SM00826	CXR04_RS27420
CXR04_RS27420	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CXR04_RS27420	SM00829	Enoylreductase
CXR04_RS27440	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS27455	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CXR04_RS27485	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS27490	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS27495	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS27510	SM00226	Low molecular weight phosphatase family
CXR04_RS27515	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS27525	SM01230	CXR04_RS27525
CXR04_RS27545	SM00729	Elongator protein 3, MiaB family, Radical SAM
CXR04_RS27605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS27605	SM00895	CXR04_RS27605
CXR04_RS27620	SM00320	WD40 repeats
CXR04_RS27620	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS27675	SM00387	Histidine kinase-like ATPases
CXR04_RS27680	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS27680	SM00448	cheY-homologous receiver domain
CXR04_RS27785	SM00448	cheY-homologous receiver domain
CXR04_RS27785	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS27790	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CXR04_RS27790	SM00387	Histidine kinase-like ATPases
CXR04_RS27790	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS27825	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS27895	SM00563	Phosphate acyltransferases
CXR04_RS27905	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS27905	SM00448	cheY-homologous receiver domain
CXR04_RS27945	SM00518	AP endonuclease family 2
CXR04_RS27950	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS27950	SM00740	CXR04_RS27950
CXR04_RS28015	SM00460	Transglutaminase/protease-like homologues
CXR04_RS28030	SM00947	Carbonic anhydrase
CXR04_RS28085	SM00864	Tubulin/FtsZ family, GTPase domain
CXR04_RS28085	SM00865	Tubulin/FtsZ family, C-terminal domain
CXR04_RS28130	SM00363	S4 RNA-binding domain
CXR04_RS28160	SM00481	DNA polymerase alpha chain like domain
CXR04_RS28190	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS28200	SM00464	Found in ATP-dependent protease La (LON)
CXR04_RS28265	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS28340	SM00448	cheY-homologous receiver domain
CXR04_RS28340	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS28345	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS28440	SM00637	CXR04_RS28440
CXR04_RS28475	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS28480	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS28480	SM00448	cheY-homologous receiver domain
CXR04_RS28495	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS28505	SM00830	Chorismate mutase type II
CXR04_RS28540	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CXR04_RS28540	SM00475	5'-3' exonuclease
CXR04_RS28540	SM00482	DNA polymerase A domain
CXR04_RS28605	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS28610	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS28615	SM00448	cheY-homologous receiver domain
CXR04_RS28615	SM01012	CXR04_RS28615
CXR04_RS28635	SM00487	DEAD-like helicases superfamily
CXR04_RS28635	SM00490	helicase superfamily c-terminal domain
CXR04_RS28635	SM00847	Helicase associated domain (HA2)  Add an annotation
CXR04_RS28645	SM00316	Ribosomal protein S1-like RNA-binding domain
CXR04_RS28655	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS28655	SM00448	cheY-homologous receiver domain
CXR04_RS28725	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS28775	SM00487	DEAD-like helicases superfamily
CXR04_RS28775	SM00490	helicase superfamily c-terminal domain
CXR04_RS28795	SM00849	Metallo-beta-lactamase superfamily
CXR04_RS28820	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CXR04_RS28820	SM00465	GIY-YIG type nucleases (URI domain)
CXR04_RS28840	SM00631	CXR04_RS28840
CXR04_RS28845	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CXR04_RS28880	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS28915	SM00861	Transketolase, pyrimidine binding domain
CXR04_RS28940	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS28965	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS29015	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CXR04_RS29015	SM00606	Cellulose Binding Domain Type IV
CXR04_RS29040	SM00656	CXR04_RS29040
CXR04_RS29065	SM00316	Ribosomal protein S1-like RNA-binding domain
CXR04_RS29070	SM00829	Enoylreductase
CXR04_RS29075	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS29075	SM00448	cheY-homologous receiver domain
CXR04_RS29090	SM00346	helix_turn_helix isocitrate lyase regulation
CXR04_RS29165	SM00327	von Willebrand factor (vWF) type A domain
CXR04_RS29165	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS29245	SM01007	Class II Aldolase and Adducin N-terminal domain
CXR04_RS29265	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS29320	SM00292	breast cancer carboxy-terminal domain
CXR04_RS29320	SM00479	CXR04_RS29320
CXR04_RS29325	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS29325	SM00448	cheY-homologous receiver domain
CXR04_RS29330	SM00387	Histidine kinase-like ATPases
CXR04_RS29355	SM00729	Elongator protein 3, MiaB family, Radical SAM
CXR04_RS29375	SM00363	S4 RNA-binding domain
CXR04_RS29390	SM00822	CXR04_RS29390
CXR04_RS29405	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS29405	SM00895	CXR04_RS29405
CXR04_RS29420	SM00855	Phosphoglycerate mutase family
CXR04_RS29425	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS29440	SM00240	Forkhead associated domain
CXR04_RS29440	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS29445	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CXR04_RS29445	SM00387	Histidine kinase-like ATPases
CXR04_RS29450	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS29450	SM00448	cheY-homologous receiver domain
CXR04_RS29470	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS29480	SM00244	prohibitin homologues
CXR04_RS29485	SM00507	HNH nucleases
CXR04_RS29550	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS29555	SM00363	S4 RNA-binding domain
CXR04_RS29595	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CXR04_RS29595	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CXR04_RS29620	SM00363	S4 RNA-binding domain
CXR04_RS29635	SM00563	Phosphate acyltransferases
CXR04_RS29640	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS29655	SM00257	Lysin motif
CXR04_RS29660	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS29665	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS29700	SM00014	Acid phosphatase homologues
CXR04_RS29725	SM00244	prohibitin homologues
CXR04_RS29745	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS29785	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS29785	SM00448	cheY-homologous receiver domain
CXR04_RS29800	SM00481	DNA polymerase alpha chain like domain
CXR04_RS29830	SM00028	Tetratricopeptide repeats
CXR04_RS29830	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS29830	SM01043	Bacterial transcriptional activator domain
CXR04_RS29860	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS29865	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS29880	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS29905	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS29905	SM00866	CXR04_RS29905
CXR04_RS29920	SM00829	Enoylreductase
CXR04_RS29925	SM00606	Cellulose Binding Domain Type IV
CXR04_RS29990	SM00849	Metallo-beta-lactamase superfamily
CXR04_RS30020	SM01130	CXR04_RS30020
CXR04_RS30025	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS30030	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS30105	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS30155	SM00829	Enoylreductase
CXR04_RS30165	SM00822	CXR04_RS30165
CXR04_RS30170	SM00835	Cupin
CXR04_RS30185	SM01043	Bacterial transcriptional activator domain
CXR04_RS30200	SM00861	Transketolase, pyrimidine binding domain
CXR04_RS30230	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS30230	SM00871	Bacterial transcription activator, effector binding domain
CXR04_RS30290	SM00855	Phosphoglycerate mutase family
CXR04_RS30315	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CXR04_RS30325	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS30345	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS30345	SM00895	CXR04_RS30345
CXR04_RS30365	SM00346	helix_turn_helix isocitrate lyase regulation
CXR04_RS30370	SM01018	B12 binding domain
CXR04_RS30390	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS30390	SM00448	cheY-homologous receiver domain
CXR04_RS30415	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS30440	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS30490	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CXR04_RS30495	SM00487	DEAD-like helicases superfamily
CXR04_RS30495	SM00490	helicase superfamily c-terminal domain
CXR04_RS30495	SM01142	CXR04_RS30495
CXR04_RS30515	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS30530	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CXR04_RS30530	SM00475	5'-3' exonuclease
CXR04_RS30535	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS30575	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS30575	SM00895	CXR04_RS30575
CXR04_RS30580	SM01230	CXR04_RS30580
CXR04_RS30640	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CXR04_RS30645	SM00091	PAS domain
CXR04_RS30645	SM00387	Histidine kinase-like ATPases
CXR04_RS30645	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS30655	SM00873	B3/4 domain
CXR04_RS30655	SM00874	tRNA synthetase B5 domain
CXR04_RS30655	SM00896	Ferredoxin-fold anticodon binding domain
CXR04_RS30680	SM00855	Phosphoglycerate mutase family
CXR04_RS30690	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CXR04_RS30735	SM01329	CXR04_RS30735
CXR04_RS30775	SM00327	von Willebrand factor (vWF) type A domain
CXR04_RS30785	SM00448	cheY-homologous receiver domain
CXR04_RS30785	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS30790	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CXR04_RS30790	SM00387	Histidine kinase-like ATPases
CXR04_RS30790	SM00388	His Kinase A (phosphoacceptor) domain
CXR04_RS30795	SM00563	Phosphate acyltransferases
CXR04_RS30825	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS30825	SM00930	CXR04_RS30825
CXR04_RS30860	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS30955	SM00479	CXR04_RS30955
CXR04_RS30965	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CXR04_RS30985	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS30995	SM00838	Elongation factor G C-terminus
CXR04_RS30995	SM00889	Elongation factor G, domain IV
CXR04_RS31040	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CXR04_RS31045	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS31050	SM01323	CXR04_RS31050
CXR04_RS31070	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CXR04_RS31070	SM00954	Region found in RelA / SpoT proteins
CXR04_RS31085	SM00849	Metallo-beta-lactamase superfamily
CXR04_RS31095	SM00756	CXR04_RS31095
CXR04_RS31100	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS31105	SM00363	S4 RNA-binding domain
CXR04_RS31105	SM01390	CXR04_RS31105
CXR04_RS31120	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CXR04_RS31125	SM00732	Likely ribonuclease with RNase H fold.
CXR04_RS31160	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS31165	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS31185	SM00841	Elongation factor P, C-terminal
CXR04_RS31185	SM01185	CXR04_RS31185
CXR04_RS31195	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS31220	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CXR04_RS31225	SM00851	MGS-like domain
CXR04_RS31225	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CXR04_RS31235	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CXR04_RS31245	SM00072	Guanylate kinase homologues.
CXR04_RS31250	SM01409	CXR04_RS31250
CXR04_RS31295	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS31310	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CXR04_RS31335	SM00822	CXR04_RS31335
CXR04_RS31340	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS31340	SM00895	CXR04_RS31340
CXR04_RS31345	SM00257	Lysin motif
CXR04_RS31360	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS31380	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CXR04_RS31390	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS31390	SM00448	cheY-homologous receiver domain
CXR04_RS31450	SM00947	Carbonic anhydrase
CXR04_RS31455	SM00881	CoA binding domain
CXR04_RS31475	SM00881	CoA binding domain
CXR04_RS31485	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS31485	SM00895	CXR04_RS31485
CXR04_RS31490	SM00852	Probable molybdopterin binding domain
CXR04_RS31505	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CXR04_RS31510	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CXR04_RS31535	SM01001	AIR carboxylase
CXR04_RS31560	SM00563	Phosphate acyltransferases
CXR04_RS31565	SM00482	DNA polymerase A domain
CXR04_RS31600	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CXR04_RS31635	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CXR04_RS31635	SM00606	Cellulose Binding Domain Type IV
CXR04_RS31645	SM00829	Enoylreductase
CXR04_RS31665	SM00812	Alpha-L-fucosidase
CXR04_RS31700	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CXR04_RS31700	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CXR04_RS31705	SM00422	helix_turn_helix, mercury resistance
CXR04_RS31715	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS31720	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CXR04_RS31720	SM01232	CXR04_RS31720
CXR04_RS31745	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS31755	SM00231	Coagulation factor 5/8 C-terminal domain, discoidin domain
CXR04_RS31755	SM00710	Parallel beta-helix repeats
CXR04_RS31765	SM00458	Ricin-type beta-trefoil
CXR04_RS31770	SM00758	CXR04_RS31770
CXR04_RS31775	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS31785	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS31800	SM00644	CXR04_RS31800
CXR04_RS31825	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS31830	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS31880	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS31885	SM00346	helix_turn_helix isocitrate lyase regulation
CXR04_RS31910	SM00346	helix_turn_helix isocitrate lyase regulation
CXR04_RS31935	SM01130	CXR04_RS31935
CXR04_RS31940	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CXR04_RS31945	SM00644	CXR04_RS31945
CXR04_RS31970	SM00420	helix_turn_helix, Deoxyribose operon repressor
CXR04_RS31970	SM01134	CXR04_RS31970
CXR04_RS31995	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS32005	SM00062	Bacterial periplasmic substrate-binding proteins
CXR04_RS32025	SM00487	DEAD-like helicases superfamily
CXR04_RS32025	SM00490	helicase superfamily c-terminal domain
CXR04_RS32045	SM00387	Histidine kinase-like ATPases
CXR04_RS32050	SM00960	Roadblock/LC7 domain
CXR04_RS32075	SM00487	DEAD-like helicases superfamily
CXR04_RS32075	SM00490	helicase superfamily c-terminal domain
CXR04_RS32085	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS32110	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS32115	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS32120	SM00506	Appr-1"-p processing enzyme
CXR04_RS32130	SM00020	Trypsin-like serine protease
CXR04_RS32135	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS32195	SM01007	Class II Aldolase and Adducin N-terminal domain
CXR04_RS32210	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS32245	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS32280	SM00710	Parallel beta-helix repeats
CXR04_RS32300	SM00986	Uracil DNA glycosylase superfamily
CXR04_RS32300	SM00987	UreE urease accessory protein, C-terminal domain 
CXR04_RS32345	SM00014	Acid phosphatase homologues
CXR04_RS32385	SM00873	B3/4 domain
CXR04_RS32390	SM00563	Phosphate acyltransferases
CXR04_RS32400	SM00893	Electron transfer flavoprotein domain
CXR04_RS32405	SM00893	Electron transfer flavoprotein domain
CXR04_RS32440	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS32450	SM00776	CXR04_RS32450
CXR04_RS32505	SM00387	Histidine kinase-like ATPases
CXR04_RS32510	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS32510	SM00448	cheY-homologous receiver domain
CXR04_RS32520	SM00448	cheY-homologous receiver domain
CXR04_RS32545	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS32585	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS32605	SM00420	helix_turn_helix, Deoxyribose operon repressor
CXR04_RS32605	SM01134	CXR04_RS32605
CXR04_RS32615	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS32615	SM00710	Parallel beta-helix repeats
CXR04_RS32615	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
CXR04_RS32655	SM01120	CXR04_RS32655
CXR04_RS32675	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS32690	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS32725	SM00369	Leucine-rich repeats, typical (most populated) subfamily
CXR04_RS32745	SM00644	CXR04_RS32745
CXR04_RS32760	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CXR04_RS32760	SM00331	Sigma factor PP2C-like phosphatases
CXR04_RS32805	SM00960	Roadblock/LC7 domain
CXR04_RS32885	SM00240	Forkhead associated domain
CXR04_RS32890	SM00422	helix_turn_helix, mercury resistance
CXR04_RS32900	SM00422	helix_turn_helix, mercury resistance
CXR04_RS32935	SM00327	von Willebrand factor (vWF) type A domain
CXR04_RS32970	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS32995	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS33000	SM00849	Metallo-beta-lactamase superfamily
CXR04_RS33015	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CXR04_RS33035	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS33040	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS33070	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS33100	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS33120	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS33120	SM00895	CXR04_RS33120
CXR04_RS33140	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CXR04_RS33155	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS33155	SM00448	cheY-homologous receiver domain
CXR04_RS33220	SM00823	Phosphopantetheine attachment site
CXR04_RS33220	SM00825	Beta-ketoacyl synthase
CXR04_RS33225	SM00823	Phosphopantetheine attachment site
CXR04_RS33225	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CXR04_RS33230	SM00923	MbtH-like protein
CXR04_RS33265	SM00823	Phosphopantetheine attachment site
CXR04_RS33320	SM00347	helix_turn_helix multiple antibiotic resistance protein
CXR04_RS33380	SM00822	CXR04_RS33380
CXR04_RS33395	SM00986	Uracil DNA glycosylase superfamily
CXR04_RS33395	SM00987	UreE urease accessory protein, C-terminal domain 
CXR04_RS33420	SM00854	Bacterial capsule synthesis protein PGA_cap
CXR04_RS33480	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS33490	SM00881	CoA binding domain
CXR04_RS33515	SM00344	helix_turn_helix ASNC type
CXR04_RS33550	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS33550	SM00866	CXR04_RS33550
CXR04_RS33560	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS33560	SM00448	cheY-homologous receiver domain
CXR04_RS33570	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS33580	SM00998	Adenylosuccinate lyase C-terminus
CXR04_RS33590	SM00116	Domain in cystathionine beta-synthase and other proteins.
CXR04_RS33595	SM01091	Transporter associated domain
CXR04_RS33610	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS33630	SM00729	Elongator protein 3, MiaB family, Radical SAM
CXR04_RS33630	SM00876	Biotin and Thiamin Synthesis associated domain
CXR04_RS33650	SM00530	Helix-turn-helix XRE-family like proteins 
CXR04_RS33720	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS33720	SM00448	cheY-homologous receiver domain
CXR04_RS33740	SM00563	Phosphate acyltransferases
CXR04_RS33780	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS33790	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS33790	SM00448	cheY-homologous receiver domain
CXR04_RS33810	SM00458	Ricin-type beta-trefoil
CXR04_RS33855	SM00822	CXR04_RS33855
CXR04_RS33855	SM00823	Phosphopantetheine attachment site
CXR04_RS33855	SM00825	Beta-ketoacyl synthase
CXR04_RS33855	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CXR04_RS33855	SM01294	CXR04_RS33855
CXR04_RS33860	SM00823	Phosphopantetheine attachment site
CXR04_RS33860	SM00824	Thioesterase
CXR04_RS33860	SM00825	Beta-ketoacyl synthase
CXR04_RS33860	SM00826	CXR04_RS33860
CXR04_RS33865	SM00862	Transcriptional regulatory protein, C terminal
CXR04_RS33865	SM01043	Bacterial transcriptional activator domain
CXR04_RS33900	SM00823	Phosphopantetheine attachment site
CXR04_RS33900	SM01294	CXR04_RS33900
CXR04_RS33950	SM00822	CXR04_RS33950
CXR04_RS33950	SM00823	Phosphopantetheine attachment site
CXR04_RS33950	SM00825	Beta-ketoacyl synthase
CXR04_RS33950	SM00826	CXR04_RS33950
CXR04_RS33950	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CXR04_RS33950	SM01294	CXR04_RS33950
CXR04_RS33970	SM00822	CXR04_RS33970
CXR04_RS33970	SM00823	Phosphopantetheine attachment site
CXR04_RS33970	SM00825	Beta-ketoacyl synthase
CXR04_RS33970	SM00826	CXR04_RS33970
CXR04_RS33970	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CXR04_RS33970	SM01294	CXR04_RS33970
CXR04_RS33975	SM00822	CXR04_RS33975
CXR04_RS33975	SM00823	Phosphopantetheine attachment site
CXR04_RS33975	SM00825	Beta-ketoacyl synthase
CXR04_RS33975	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CXR04_RS33975	SM01294	CXR04_RS33975
CXR04_RS33990	SM00822	CXR04_RS33990
CXR04_RS33990	SM00823	Phosphopantetheine attachment site
CXR04_RS33990	SM00825	Beta-ketoacyl synthase
CXR04_RS33990	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CXR04_RS34010	SM00822	CXR04_RS34010
CXR04_RS34010	SM00823	Phosphopantetheine attachment site
CXR04_RS34010	SM00825	Beta-ketoacyl synthase
CXR04_RS34010	SM00826	CXR04_RS34010
CXR04_RS34010	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CXR04_RS34010	SM00829	Enoylreductase
CXR04_RS34010	SM01294	CXR04_RS34010
CXR04_RS34030	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS34045	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS34105	SM00460	Transglutaminase/protease-like homologues
CXR04_RS34115	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CXR04_RS34150	SM00849	Metallo-beta-lactamase superfamily
CXR04_RS34175	SM00342	helix_turn_helix, arabinose operon control protein
CXR04_RS34200	SM00420	helix_turn_helix, Deoxyribose operon repressor
CXR04_RS34200	SM01134	CXR04_RS34200
CXR04_RS34220	SM00220	Serine/Threonine protein kinases, catalytic domain
CXR04_RS34230	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS34250	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CXR04_RS34265	SM00870	CXR04_RS34265
CXR04_RS34270	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CXR04_RS34270	SM00895	CXR04_RS34270
CXR04_RS34310	SM00421	helix_turn_helix, Lux Regulon
CXR04_RS34310	SM00448	cheY-homologous receiver domain
CXR04_RS34375	SM00420	helix_turn_helix, Deoxyribose operon repressor
CXR04_RS34375	SM01134	CXR04_RS34375
CXR04_RS34390	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS34405	SM00382	ATPases associated with a variety of cellular activities
CXR04_RS34450	SM00354	helix_turn _helix lactose operon repressor
CXR04_RS34460	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CXR04_RS34465	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CXR04_RS34485	SM00829	Enoylreductase
CXR04_RS34515	SM00422	helix_turn_helix, mercury resistance
CXR04_RS34570	SM00382	ATPases associated with a variety of cellular activities
