locus-tag	class	description
C1N79_RS00005	COG0604	alcohol dehydrogenase
C1N79_RS00005	COG3321	synthase
C1N79_RS00045	COG0300	oxidoreductase activity
C1N79_RS00070	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
C1N79_RS00105	COG3629	intracellular signal transduction
C1N79_RS00105	COG3903	Transcriptional regulator
C1N79_RS00110	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
C1N79_RS00155	COG0745	RESPONSE REGULATOR receiver
C1N79_RS00165	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
C1N79_RS00175	COG0154	amidase activity
C1N79_RS00240	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C1N79_RS00260	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
C1N79_RS00310	COG2867	negative regulation of translational initiation
C1N79_RS00320	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
C1N79_RS00325	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
C1N79_RS00355	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
C1N79_RS00370	COG0702	epimerase
C1N79_RS00500	COG2197	response regulator
C1N79_RS00535	COG2124	cytochrome p450
C1N79_RS00545	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS00550	COG3483	tryptophan 2,3-dioxygenase activity
C1N79_RS00600	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C1N79_RS00610	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
C1N79_RS00615	COG0022	dehydrogenase e1 component
C1N79_RS00615	COG0508	dehydrogenase complex catalyzes the overall conversion of
C1N79_RS00620	COG0508	dehydrogenase complex catalyzes the overall conversion of
C1N79_RS00635	COG2326	polyphosphate kinase activity
C1N79_RS00640	COG4109	DRTGG domain
C1N79_RS00725	COG0517	IMP dehydrogenase activity
C1N79_RS00725	COG0516	GMP reductase activity
C1N79_RS00730	COG0409	Hydrogenase expression formation protein
C1N79_RS00735	COG0309	Hydrogenase expression formation protein (HypE)
C1N79_RS00740	COG1937	Protein conserved in bacteria
C1N79_RS00750	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
C1N79_RS00755	COG0730	response to heat
C1N79_RS00760	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
C1N79_RS00785	COG0662	Cupin 2, conserved barrel domain protein
C1N79_RS00795	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
C1N79_RS00845	COG3033	Beta-eliminating lyase
C1N79_RS00860	COG2207	Transcriptional regulator
C1N79_RS00885	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
C1N79_RS00885	COG1672	PFAM Archaeal ATPase
C1N79_RS00915	COG3046	protein related to deoxyribodipyrimidine photolyase
C1N79_RS00920	COG0142	geranyltranstransferase activity
C1N79_RS00940	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
C1N79_RS00945	COG2226	methyltransferase
C1N79_RS00955	COG0300	oxidoreductase activity
C1N79_RS01010	COG0516	GMP reductase activity
C1N79_RS01010	COG0517	IMP dehydrogenase activity
C1N79_RS01015	COG1063	alcohol dehydrogenase
C1N79_RS01050	COG0589	response to stress
C1N79_RS01110	COG2197	response regulator
C1N79_RS01115	COG4585	Histidine kinase
C1N79_RS01140	COG0149	triose-phosphate isomerase activity
C1N79_RS01235	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS01255	COG2315	Protein conserved in bacteria
C1N79_RS01325	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
C1N79_RS01340	COG0829	nickel cation binding
C1N79_RS01350	COG0655	NAD(P)H dehydrogenase (quinone) activity
C1N79_RS01375	COG2226	methyltransferase
C1N79_RS01395	COG3483	tryptophan 2,3-dioxygenase activity
C1N79_RS01400	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS01405	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
C1N79_RS01410	COG2151	metal-sulfur cluster biosynthetic enzyme
C1N79_RS01415	COG3396	Phenylacetate-CoA oxygenase
C1N79_RS01425	COG3396	Phenylacetate-CoA oxygenase
C1N79_RS01450	COG0604	alcohol dehydrogenase
C1N79_RS01460	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
C1N79_RS01465	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
C1N79_RS01470	COG1595	DNA-templated transcription, initiation
C1N79_RS01515	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
C1N79_RS01525	COG3959	Transketolase, thiamine diphosphate binding domain
C1N79_RS01540	COG0604	alcohol dehydrogenase
C1N79_RS01540	COG3321	synthase
C1N79_RS01555	COG3321	synthase
C1N79_RS01555	COG0604	alcohol dehydrogenase
C1N79_RS01565	COG3321	synthase
C1N79_RS01565	COG0604	alcohol dehydrogenase
C1N79_RS01570	COG0604	alcohol dehydrogenase
C1N79_RS01570	COG3321	synthase
C1N79_RS01620	COG2124	cytochrome p450
C1N79_RS01630	COG2208	phosphoserine phosphatase activity
C1N79_RS01630	COG2770	Histidine kinase
C1N79_RS01635	COG0596	Alpha beta hydrolase
C1N79_RS01640	COG0604	alcohol dehydrogenase
C1N79_RS01640	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS01640	COG3321	synthase
C1N79_RS01645	COG0789	Transcriptional regulator
C1N79_RS01680	COG2267	carboxylic ester hydrolase activity
C1N79_RS01690	COG1309	transcriptional regulator
C1N79_RS01705	COG3631	Ketosteroid isomerase-related protein
C1N79_RS01710	COG0702	epimerase
C1N79_RS01715	COG2409	Drug exporters of the RND superfamily
C1N79_RS01720	COG4585	Histidine kinase
C1N79_RS01725	COG2197	response regulator
C1N79_RS01735	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C1N79_RS01765	COG2353	YceI-like domain
C1N79_RS01770	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
C1N79_RS01775	COG2318	DinB family
C1N79_RS01785	COG4152	abc transporter atp-binding protein
C1N79_RS01790	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS01810	COG1131	(ABC) transporter
C1N79_RS01855	COG0494	nUDIX hydrolase
C1N79_RS01870	COG0702	epimerase
C1N79_RS01890	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
C1N79_RS01905	COG0789	Transcriptional regulator
C1N79_RS01920	COG1522	sequence-specific DNA binding
C1N79_RS01925	COG1231	oxidoreductase activity
C1N79_RS01930	COG2132	Multicopper oxidase
C1N79_RS01995	COG0542	response to heat
C1N79_RS02010	COG1175	transmembrane transport
C1N79_RS02015	COG0395	ABC-type sugar transport system, permease component
C1N79_RS02030	COG2814	Major facilitator Superfamily
C1N79_RS02035	COG1063	alcohol dehydrogenase
C1N79_RS02050	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C1N79_RS02055	COG0800	Aldolase
C1N79_RS02060	COG4948	Mandelate Racemase Muconate Lactonizing
C1N79_RS02070	COG2186	Transcriptional regulator
C1N79_RS02095	COG3507	Belongs to the glycosyl hydrolase 43 family
C1N79_RS02105	COG0488	(ABC) transporter
C1N79_RS02110	COG0798	PFAM Bile acid sodium symporter
C1N79_RS02115	COG0640	Transcriptional regulator
C1N79_RS02120	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
C1N79_RS02150	COG2226	methyltransferase
C1N79_RS02160	COG3293	Transposase
C1N79_RS02170	COG1619	proteins homologs of microcin C7 resistance protein MccF
C1N79_RS02205	COG0803	Belongs to the bacterial solute-binding protein 9 family
C1N79_RS02215	COG1108	ABC-type Mn2 Zn2 transport systems permease components
C1N79_RS02220	COG1120	ATPase activity
C1N79_RS02265	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C1N79_RS02280	COG0179	Fumarylacetoacetate (FAA) hydrolase
C1N79_RS02315	COG1366	Belongs to the anti-sigma-factor antagonist family
C1N79_RS02320	COG1366	Belongs to the anti-sigma-factor antagonist family
C1N79_RS02325	COG2172	sigma factor antagonist activity
C1N79_RS02340	COG0667	Aldo Keto reductase
C1N79_RS02345	COG1733	regulation of RNA biosynthetic process
C1N79_RS02365	COG0477	Major facilitator Superfamily
C1N79_RS02375	COG4191	Histidine kinase
C1N79_RS02380	COG0572	uridine kinase
C1N79_RS02400	COG2072	flavoprotein involved in K transport
C1N79_RS02425	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C1N79_RS02430	COG1120	ATPase activity
C1N79_RS02440	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
C1N79_RS02445	COG0583	DNA-binding transcription factor activity
C1N79_RS02450	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C1N79_RS02460	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
C1N79_RS02475	COG4709	membrane
C1N79_RS02495	COG2814	Major facilitator Superfamily
C1N79_RS02505	COG1609	Transcriptional regulator
C1N79_RS02510	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
C1N79_RS02515	COG0659	secondary active sulfate transmembrane transporter activity
C1N79_RS02520	COG0789	Transcriptional regulator
C1N79_RS02600	COG1309	transcriptional regulator
C1N79_RS02655	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
C1N79_RS02655	COG2755	lipolytic protein G-D-S-L family
C1N79_RS02665	COG0666	response to abiotic stimulus
C1N79_RS02670	COG2208	phosphoserine phosphatase activity
C1N79_RS02700	COG2208	phosphoserine phosphatase activity
C1N79_RS02715	COG0714	Associated with various cellular activities
C1N79_RS02725	COG1733	regulation of RNA biosynthetic process
C1N79_RS02745	COG0596	Alpha beta hydrolase
C1N79_RS02770	COG4941	Belongs to the sigma-70 factor family
C1N79_RS02775	COG3795	YCII-related domain
C1N79_RS02790	COG1733	regulation of RNA biosynthetic process
C1N79_RS02795	COG5640	endopeptidase activity
C1N79_RS02810	COG2353	YceI-like domain
C1N79_RS02840	COG0154	amidase activity
C1N79_RS02845	COG1309	transcriptional regulator
C1N79_RS02870	COG0346	lactoylglutathione lyase activity
C1N79_RS02925	COG0395	ABC-type sugar transport system, permease component
C1N79_RS02965	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
C1N79_RS02970	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
C1N79_RS02990	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
C1N79_RS03005	COG2239	Acts as a magnesium transporter
C1N79_RS03015	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
C1N79_RS03020	COG2409	Drug exporters of the RND superfamily
C1N79_RS03060	COG3226	Transcriptional regulator
C1N79_RS03065	COG2391	methyltransferase activity
C1N79_RS03070	COG0326	Molecular chaperone. Has ATPase activity
C1N79_RS03085	COG2755	lipolytic protein G-D-S-L family
C1N79_RS03090	COG4977	sequence-specific DNA binding
C1N79_RS03135	COG2175	clavaminate synthase activity
C1N79_RS03145	COG0395	ABC-type sugar transport system, permease component
C1N79_RS03150	COG1175	transmembrane transport
C1N79_RS03170	COG1953	Uracil, thiamine, allantoin
C1N79_RS03195	COG3795	YCII-related domain
C1N79_RS03200	COG4941	Belongs to the sigma-70 factor family
C1N79_RS03215	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS03240	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
C1N79_RS03245	COG2151	metal-sulfur cluster biosynthetic enzyme
C1N79_RS03250	COG3396	Phenylacetate-CoA oxygenase
C1N79_RS03255	COG3460	Phenylacetate-CoA oxygenase
C1N79_RS03260	COG3396	Phenylacetate-CoA oxygenase
C1N79_RS03265	COG2050	protein possibly involved in aromatic compounds catabolism
C1N79_RS03315	COG5640	endopeptidase activity
C1N79_RS03320	COG1119	ATPase activity
C1N79_RS03335	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
C1N79_RS03345	COG1335	isochorismatase
C1N79_RS03400	COG0583	DNA-binding transcription factor activity
C1N79_RS03405	COG2124	cytochrome p450
C1N79_RS03425	COG3340	Belongs to the peptidase S51 family
C1N79_RS03435	COG0583	DNA-binding transcription factor activity
C1N79_RS03450	COG2814	Major facilitator Superfamily
C1N79_RS03460	COG0583	DNA-binding transcription factor activity
C1N79_RS03465	COG5640	endopeptidase activity
C1N79_RS03485	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
C1N79_RS03485	COG1017	nitric oxide dioxygenase activity
C1N79_RS03490	COG1959	2 iron, 2 sulfur cluster binding
C1N79_RS03545	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS03550	COG0028	Belongs to the TPP enzyme family
C1N79_RS03560	COG4209	transmembrane transport
C1N79_RS03565	COG0395	ABC-type sugar transport system, permease component
C1N79_RS03585	COG0110	maltose O-acetyltransferase activity
C1N79_RS03605	COG1120	ATPase activity
C1N79_RS03680	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
C1N79_RS03685	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS03710	COG0475	glutathione-regulated potassium exporter activity
C1N79_RS03740	COG1131	(ABC) transporter
C1N79_RS03745	COG0142	geranyltranstransferase activity
C1N79_RS03755	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
C1N79_RS03765	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
C1N79_RS03805	COG0456	acetyltransferase
C1N79_RS03810	COG0243	molybdopterin cofactor binding
C1N79_RS03870	COG0753	catalase activity
C1N79_RS03900	COG0009	L-threonylcarbamoyladenylate synthase
C1N79_RS03940	COG3285	dna ligase
C1N79_RS03940	COG1793	dna ligase
C1N79_RS03950	COG0181	hydroxymethylbilane synthase activity
C1N79_RS03960	COG1191	sigma factor activity
C1N79_RS03990	COG0366	Alpha amylase catalytic
C1N79_RS04005	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
C1N79_RS04010	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
C1N79_RS04040	COG2205	protein histidine kinase activity
C1N79_RS04040	COG0784	Response regulator, receiver
C1N79_RS04040	COG5002	protein histidine kinase activity
C1N79_RS04055	COG1366	Belongs to the anti-sigma-factor antagonist family
C1N79_RS04060	COG1366	Belongs to the anti-sigma-factor antagonist family
C1N79_RS04065	COG2172	sigma factor antagonist activity
C1N79_RS04120	COG1982	Orn Lys Arg decarboxylase major
C1N79_RS04175	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
C1N79_RS04205	COG2197	response regulator
C1N79_RS04210	COG2340	Cysteine-rich secretory protein family
C1N79_RS04220	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
C1N79_RS04225	COG0515	serine threonine protein kinase
C1N79_RS04225	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
C1N79_RS04230	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C1N79_RS04250	COG0667	Aldo Keto reductase
C1N79_RS04260	COG0328	RNA-DNA hybrid ribonuclease activity
C1N79_RS04275	COG0740	serine-type endopeptidase activity
C1N79_RS04280	COG0740	serine-type endopeptidase activity
C1N79_RS04285	COG1396	sequence-specific DNA binding
C1N79_RS04290	COG1191	sigma factor activity
C1N79_RS04320	COG0667	Aldo Keto reductase
C1N79_RS04325	COG0583	DNA-binding transcription factor activity
C1N79_RS04335	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
C1N79_RS04340	COG0346	lactoylglutathione lyase activity
C1N79_RS04350	COG0667	Aldo Keto reductase
C1N79_RS04360	COG1012	belongs to the aldehyde dehydrogenase family
C1N79_RS04415	COG0673	inositol 2-dehydrogenase activity
C1N79_RS04455	COG0318	PFAM AMP-dependent synthetase and ligase
C1N79_RS04460	COG2366	antibiotic biosynthetic process
C1N79_RS04465	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
C1N79_RS04480	COG0515	serine threonine protein kinase
C1N79_RS04510	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
C1N79_RS04520	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
C1N79_RS04525	COG1804	L-carnitine dehydratase bile acid-inducible protein F
C1N79_RS04540	COG2205	protein histidine kinase activity
C1N79_RS04545	COG0745	RESPONSE REGULATOR receiver
C1N79_RS04575	COG0154	amidase activity
C1N79_RS04590	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
C1N79_RS04600	COG0515	serine threonine protein kinase
C1N79_RS04610	COG1228	amidohydrolase
C1N79_RS04615	COG1959	2 iron, 2 sulfur cluster binding
C1N79_RS04620	COG2326	polyphosphate kinase activity
C1N79_RS04625	COG1733	regulation of RNA biosynthetic process
C1N79_RS04660	COG0246	Mannitol dehydrogenase
C1N79_RS04665	COG0477	Major facilitator Superfamily
C1N79_RS04670	COG1063	alcohol dehydrogenase
C1N79_RS04735	COG1132	(ABC) transporter
C1N79_RS04740	COG1132	(ABC) transporter
C1N79_RS04770	COG1509	lysine 2,3-aminomutase activity
C1N79_RS04795	COG0673	inositol 2-dehydrogenase activity
C1N79_RS04800	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
C1N79_RS04805	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
C1N79_RS04825	COG3173	Aminoglycoside phosphotransferase
C1N79_RS04865	COG2376	Dihydroxyacetone kinase
C1N79_RS04870	COG1461	Dihydroxyacetone kinase
C1N79_RS04875	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
C1N79_RS04885	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS04910	COG1902	pentaerythritol trinitrate reductase activity
C1N79_RS04910	COG0446	pyridine nucleotide-disulphide oxidoreductase
C1N79_RS04930	COG2890	protein-(glutamine-N5) methyltransferase activity
C1N79_RS04945	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
C1N79_RS04960	COG3458	cephalosporin-C deacetylase activity
C1N79_RS04965	COG2188	Transcriptional regulator
C1N79_RS04975	COG1695	Transcriptional regulator
C1N79_RS04985	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
C1N79_RS04990	COG1686	Belongs to the peptidase S11 family
C1N79_RS04995	COG2066	Belongs to the glutaminase family
C1N79_RS05005	COG1968	undecaprenyl-diphosphatase activity
C1N79_RS05025	COG1175	transmembrane transport
C1N79_RS05030	COG0395	ABC-type sugar transport system, permease component
C1N79_RS05040	COG1846	Transcriptional regulator
C1N79_RS05065	COG0137	argininosuccinate synthase activity
C1N79_RS05090	COG1175	transmembrane transport
C1N79_RS05095	COG1653	transport
C1N79_RS05100	COG1609	Transcriptional regulator
C1N79_RS05125	COG1309	transcriptional regulator
C1N79_RS05140	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS05160	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
C1N79_RS05165	COG0463	Glycosyl transferase, family 2
C1N79_RS05200	COG1349	DNA-binding transcription factor activity
C1N79_RS05250	COG1940	carbohydrate kinase activity
C1N79_RS05260	COG2813	Specifically methylates the guanine in position
C1N79_RS05270	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
C1N79_RS05315	COG0783	Belongs to the Dps family
C1N79_RS05330	COG1501	Belongs to the glycosyl hydrolase 31 family
C1N79_RS05340	COG1175	transmembrane transport
C1N79_RS05345	COG0395	ABC-type sugar transport system, permease component
C1N79_RS05350	COG2723	6-phospho-beta-galactosidase activity
C1N79_RS05380	COG2197	response regulator
C1N79_RS05385	COG4585	Histidine kinase
C1N79_RS05390	COG0445	tRNA wobble uridine modification
C1N79_RS05405	COG1660	Displays ATPase and GTPase activities
C1N79_RS05455	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
C1N79_RS05475	COG0204	Acyl-transferase
C1N79_RS05500	COG0584	glycerophosphoryl diester phosphodiesterase
C1N79_RS05540	COG0671	phosphoesterase, PA-phosphatase related
C1N79_RS05565	COG0640	Transcriptional regulator
C1N79_RS05570	COG1902	pentaerythritol trinitrate reductase activity
C1N79_RS05585	COG1960	acyl-CoA dehydrogenase activity
C1N79_RS05595	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
C1N79_RS05610	COG2706	6-phosphogluconolactonase activity
C1N79_RS05625	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
C1N79_RS05660	COG4221	oxidoreductase activity
C1N79_RS05670	COG0726	polysaccharide deacetylase
C1N79_RS05680	COG1529	Aldehyde oxidase and xanthine dehydrogenase
C1N79_RS05685	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
C1N79_RS05690	COG2080	2 iron, 2 sulfur cluster binding
C1N79_RS05700	COG4565	transcriptional regulatory protein
C1N79_RS05705	COG3290	protein histidine kinase activity
C1N79_RS05740	COG1063	alcohol dehydrogenase
C1N79_RS05750	COG0432	Pfam Uncharacterised protein family UPF0047
C1N79_RS05755	COG2072	flavoprotein involved in K transport
C1N79_RS05765	COG1132	(ABC) transporter
C1N79_RS05780	COG1132	(ABC) transporter
C1N79_RS05785	COG1132	(ABC) transporter
C1N79_RS05795	COG0254	rRNA binding
C1N79_RS05810	COG1946	Acyl-CoA thioesterase
C1N79_RS05815	COG2018	Roadblock/LC7 domain
C1N79_RS05880	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
C1N79_RS05890	COG2115	Belongs to the xylose isomerase family
C1N79_RS05895	COG1070	Carbohydrate kinase
C1N79_RS05900	COG1940	carbohydrate kinase activity
C1N79_RS05900	COG1846	Transcriptional regulator
C1N79_RS05915	COG1012	belongs to the aldehyde dehydrogenase family
C1N79_RS05920	COG1472	Belongs to the glycosyl hydrolase 3 family
C1N79_RS05930	COG0592	DNA-directed DNA polymerase activity
C1N79_RS05945	COG0714	Associated with various cellular activities
C1N79_RS05995	COG1960	acyl-CoA dehydrogenase activity
C1N79_RS06000	COG1960	acyl-CoA dehydrogenase activity
C1N79_RS06010	COG1396	sequence-specific DNA binding
C1N79_RS06010	COG3800	Transcriptional regulator
C1N79_RS06020	COG1793	dna ligase
C1N79_RS06030	COG1012	belongs to the aldehyde dehydrogenase family
C1N79_RS06040	COG3424	synthase
C1N79_RS06045	COG2124	cytochrome p450
C1N79_RS06055	COG1960	acyl-CoA dehydrogenase activity
C1N79_RS06065	COG0242	peptide deformylase activity
C1N79_RS06070	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
C1N79_RS06075	COG3442	glutamine amidotransferase
C1N79_RS06080	COG0205	6-phosphofructokinase activity
C1N79_RS06095	COG3275	phosphorelay sensor kinase activity
C1N79_RS06100	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
C1N79_RS06110	COG3279	Response regulator of the LytR AlgR family
C1N79_RS06115	COG1522	sequence-specific DNA binding
C1N79_RS06120	COG1834	amidinotransferase
C1N79_RS06125	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
C1N79_RS06135	COG0477	Major facilitator Superfamily
C1N79_RS06155	COG0829	nickel cation binding
C1N79_RS06160	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
C1N79_RS06170	COG0804	urea catabolic process
C1N79_RS06175	COG0832	Belongs to the urease beta subunit family
C1N79_RS06180	COG0831	urea catabolic process
C1N79_RS06185	COG1309	transcriptional regulator
C1N79_RS06200	COG0740	serine-type endopeptidase activity
C1N79_RS06235	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
C1N79_RS06240	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
C1N79_RS06245	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
C1N79_RS06250	COG2226	methyltransferase
C1N79_RS06270	COG0456	acetyltransferase
C1N79_RS06290	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
C1N79_RS06295	COG3663	DNA glycosylase
C1N79_RS06310	COG1131	(ABC) transporter
C1N79_RS06315	COG4585	Histidine kinase
C1N79_RS06320	COG2197	response regulator
C1N79_RS06325	COG1940	carbohydrate kinase activity
C1N79_RS06330	COG2188	Transcriptional regulator
C1N79_RS06335	COG1595	DNA-templated transcription, initiation
C1N79_RS06340	COG0596	Alpha beta hydrolase
C1N79_RS06340	COG0508	dehydrogenase complex catalyzes the overall conversion of
C1N79_RS06370	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
C1N79_RS06375	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
C1N79_RS06385	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C1N79_RS06385	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
C1N79_RS06430	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
C1N79_RS06445	COG0626	cystathionine gamma-synthase activity
C1N79_RS06460	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS06470	COG1522	sequence-specific DNA binding
C1N79_RS06475	COG0419	ATPase involved in DNA repair
C1N79_RS06480	COG0420	3'-5' exonuclease activity
C1N79_RS06485	COG1739	Uncharacterized protein family UPF0029
C1N79_RS06495	COG1832	CoA-binding protein
C1N79_RS06505	COG0640	Transcriptional regulator
C1N79_RS06525	COG0110	maltose O-acetyltransferase activity
C1N79_RS06555	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
C1N79_RS06570	COG1968	undecaprenyl-diphosphatase activity
C1N79_RS06580	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS06585	COG0815	Transfers the fatty acyl group on membrane lipoproteins
C1N79_RS06605	COG2318	DinB family
C1N79_RS06620	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
C1N79_RS06655	COG0723	plastoquinol--plastocyanin reductase activity
C1N79_RS06670	COG0697	spore germination
C1N79_RS06710	COG0384	phenazine biosynthesis protein PhzF
C1N79_RS06735	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
C1N79_RS06740	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
C1N79_RS06745	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
C1N79_RS06760	COG0725	ABC transporter, periplasmic molybdate-binding protein
C1N79_RS06780	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
C1N79_RS06780	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
C1N79_RS06790	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
C1N79_RS06830	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
C1N79_RS06860	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
C1N79_RS06870	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
C1N79_RS06875	COG1501	Belongs to the glycosyl hydrolase 31 family
C1N79_RS06885	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
C1N79_RS06890	COG3706	GGDEF domain
C1N79_RS06895	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
C1N79_RS06900	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
C1N79_RS06915	COG2018	Roadblock/LC7 domain
C1N79_RS06940	COG1414	Transcriptional regulator
C1N79_RS06955	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C1N79_RS06985	COG2814	Major facilitator Superfamily
C1N79_RS06990	COG4336	lyase activity
C1N79_RS06995	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
C1N79_RS07000	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
C1N79_RS07005	COG1984	allophanate hydrolase subunit 2
C1N79_RS07015	COG0438	transferase activity, transferring glycosyl groups
C1N79_RS07020	COG0438	transferase activity, transferring glycosyl groups
C1N79_RS07055	COG2364	Membrane
C1N79_RS07065	COG2270	Major facilitator Superfamily
C1N79_RS07080	COG1216	Glycosyl transferase, family 2
C1N79_RS07105	COG1960	acyl-CoA dehydrogenase activity
C1N79_RS07155	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
C1N79_RS07160	COG0140	phosphoribosyl-ATP diphosphatase activity
C1N79_RS07165	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
C1N79_RS07170	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
C1N79_RS07170	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
C1N79_RS07175	COG3201	nicotinamide mononucleotide transporter
C1N79_RS07195	COG2223	nitrite transmembrane transporter activity
C1N79_RS07205	COG2233	PERMEase
C1N79_RS07230	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
C1N79_RS07255	COG0531	amino acid
C1N79_RS07270	COG2390	Transcriptional regulator
C1N79_RS07275	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
C1N79_RS07285	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
C1N79_RS07300	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
C1N79_RS07310	COG1758	RNA polymerase activity
C1N79_RS07315	COG0194	GDP metabolic process
C1N79_RS07325	COG0284	orotidine-5'-phosphate decarboxylase activity
C1N79_RS07330	COG0167	dihydroorotate dehydrogenase activity
C1N79_RS07335	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
C1N79_RS07340	COG0505	Belongs to the CarA family
C1N79_RS07350	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
C1N79_RS07355	COG0540	Belongs to the ATCase OTCase family
C1N79_RS07360	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
C1N79_RS07370	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
C1N79_RS07375	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
C1N79_RS07380	COG0006	proline dipeptidase activity
C1N79_RS07390	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
C1N79_RS07395	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
C1N79_RS07400	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
C1N79_RS07405	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
C1N79_RS07420	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
C1N79_RS07425	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
C1N79_RS07445	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
C1N79_RS07460	COG0124	histidyl-tRNA synthetase
C1N79_RS07470	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
C1N79_RS07475	COG1196	nuclear chromosome segregation
C1N79_RS07495	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
C1N79_RS07505	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
C1N79_RS07510	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
C1N79_RS07515	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
C1N79_RS07525	COG2255	four-way junction helicase activity
C1N79_RS07530	COG0632	four-way junction helicase activity
C1N79_RS07535	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
C1N79_RS07540	COG0217	transcriptional regulatory protein
C1N79_RS07545	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
C1N79_RS07550	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
C1N79_RS07560	COG0438	transferase activity, transferring glycosyl groups
C1N79_RS07565	COG1560	Kdo2-lipid A biosynthetic process
C1N79_RS07570	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
C1N79_RS07590	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
C1N79_RS07605	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
C1N79_RS07630	COG0395	ABC-type sugar transport system, permease component
C1N79_RS07635	COG1175	transmembrane transport
C1N79_RS07690	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
C1N79_RS07745	COG1648	precorrin-2 dehydrogenase activity
C1N79_RS07745	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
C1N79_RS07750	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
C1N79_RS07770	COG2011	ABC-type metal ion transport system permease component
C1N79_RS07775	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
C1N79_RS07800	COG0584	glycerophosphoryl diester phosphodiesterase
C1N79_RS07805	COG0318	PFAM AMP-dependent synthetase and ligase
C1N79_RS07805	COG0204	Acyl-transferase
C1N79_RS07810	COG0477	Major facilitator Superfamily
C1N79_RS07825	COG0165	Argininosuccinate lyase
C1N79_RS07855	COG1438	arginine binding
C1N79_RS07860	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
C1N79_RS07865	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
C1N79_RS07870	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
C1N79_RS07875	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
C1N79_RS07905	COG0697	spore germination
C1N79_RS07915	COG1649	PFAM Uncharacterised BCR, COG1649
C1N79_RS07940	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
C1N79_RS07940	COG0072	phenylalanine-tRNA ligase activity
C1N79_RS07945	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
C1N79_RS07950	COG5002	protein histidine kinase activity
C1N79_RS07955	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
C1N79_RS07960	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
C1N79_RS07965	COG0291	Belongs to the bacterial ribosomal protein bL35 family
C1N79_RS07970	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
C1N79_RS08010	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS08015	COG1012	belongs to the aldehyde dehydrogenase family
C1N79_RS08020	COG0174	glutamine synthetase
C1N79_RS08030	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
C1N79_RS08055	COG4176	ABC-type proline glycine betaine transport system permease component
C1N79_RS08060	COG4175	Glycine betaine
C1N79_RS08060	COG0517	IMP dehydrogenase activity
C1N79_RS08065	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
C1N79_RS08080	COG0564	pseudouridine synthase activity
C1N79_RS08115	COG0805	protein transport
C1N79_RS08120	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
C1N79_RS08150	COG0545	Peptidyl-prolyl cis-trans isomerase
C1N79_RS08155	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
C1N79_RS08165	COG1609	Transcriptional regulator
C1N79_RS08170	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
C1N79_RS08175	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
C1N79_RS08190	COG4122	O-methyltransferase activity
C1N79_RS08195	COG1222	aaa ATPase
C1N79_RS08220	COG1994	Peptidase M50
C1N79_RS08220	COG0517	IMP dehydrogenase activity
C1N79_RS08230	COG2197	response regulator
C1N79_RS08235	COG4166	transmembrane transport
C1N79_RS08245	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
C1N79_RS08250	COG0646	methionine synthase
C1N79_RS08250	COG1410	methionine synthase
C1N79_RS08255	COG1414	Transcriptional regulator
C1N79_RS08260	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
C1N79_RS08265	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
C1N79_RS08270	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
C1N79_RS08280	COG0215	cysteine-tRNA ligase activity
C1N79_RS08295	COG0588	phosphoglycerate mutase activity
C1N79_RS08300	COG0598	Magnesium transport protein CorA
C1N79_RS08310	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C1N79_RS08315	COG0667	Aldo Keto reductase
C1N79_RS08345	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
C1N79_RS08355	COG3012	SEC-C Motif Domain Protein
C1N79_RS08360	COG2186	Transcriptional regulator
C1N79_RS08365	COG3265	gluconokinase activity
C1N79_RS08390	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
C1N79_RS08405	COG2149	membrane
C1N79_RS08445	COG0318	PFAM AMP-dependent synthetase and ligase
C1N79_RS08455	COG3876	Protein conserved in bacteria
C1N79_RS08480	COG0789	Transcriptional regulator
C1N79_RS08500	COG1960	acyl-CoA dehydrogenase activity
C1N79_RS08510	COG0640	Transcriptional regulator
C1N79_RS08515	COG0697	spore germination
C1N79_RS08530	COG3842	ATPase activity
C1N79_RS08545	COG2851	Citrate transporter
C1N79_RS08550	COG0243	molybdopterin cofactor binding
C1N79_RS08555	COG1309	transcriptional regulator
C1N79_RS08565	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
C1N79_RS08570	COG2188	Transcriptional regulator
C1N79_RS08600	COG5343	regulation of RNA biosynthetic process
C1N79_RS08605	COG1595	DNA-templated transcription, initiation
C1N79_RS08610	COG2815	serine threonine protein kinase
C1N79_RS08610	COG0515	serine threonine protein kinase
C1N79_RS08615	COG2755	lipolytic protein G-D-S-L family
C1N79_RS08620	COG0463	Glycosyl transferase, family 2
C1N79_RS08630	COG1649	PFAM Uncharacterised BCR, COG1649
C1N79_RS08630	COG0726	polysaccharide deacetylase
C1N79_RS08645	COG1725	Transcriptional regulator
C1N79_RS08665	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
C1N79_RS08665	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
C1N79_RS08680	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
C1N79_RS08680	COG0662	Cupin 2, conserved barrel domain protein
C1N79_RS08690	COG0587	DNA-directed DNA polymerase activity
C1N79_RS08715	COG1799	cell septum assembly
C1N79_RS08720	COG1960	acyl-CoA dehydrogenase activity
C1N79_RS08725	COG0477	Major facilitator Superfamily
C1N79_RS08735	COG0671	phosphoesterase, PA-phosphatase related
C1N79_RS08760	COG1160	GTP binding
C1N79_RS08770	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
C1N79_RS08785	COG0723	plastoquinol--plastocyanin reductase activity
C1N79_RS08820	COG1187	pseudouridine synthase activity
C1N79_RS08825	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
C1N79_RS08830	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
C1N79_RS08845	COG0686	Belongs to the AlaDH PNT family
C1N79_RS08855	COG0494	nUDIX hydrolase
C1N79_RS08860	COG0504	CTP synthase activity
C1N79_RS08865	COG3387	PFAM Glycoside hydrolase 15-related
C1N79_RS08875	COG0297	glycogen (starch) synthase activity
C1N79_RS08885	COG0497	DNA recombination
C1N79_RS08890	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
C1N79_RS08910	COG1120	ATPase activity
C1N79_RS08915	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C1N79_RS08920	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C1N79_RS08925	COG0647	UMP catabolic process
C1N79_RS08965	COG2094	Belongs to the DNA glycosylase MPG family
C1N79_RS08975	COG1881	PFAM PEBP family protein
C1N79_RS08995	COG1119	ATPase activity
C1N79_RS09010	COG2197	response regulator
C1N79_RS09015	COG4585	Histidine kinase
C1N79_RS09020	COG4221	oxidoreductase activity
C1N79_RS09035	COG0842	Transport permease protein
C1N79_RS09035	COG1716	ATPase activity
C1N79_RS09035	COG1131	(ABC) transporter
C1N79_RS09045	COG0560	Phosphoserine phosphatase
C1N79_RS09045	COG3830	Belongs to the UPF0237 family
C1N79_RS09050	COG0588	phosphoglycerate mutase activity
C1N79_RS09070	COG2186	Transcriptional regulator
C1N79_RS09085	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS09100	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
C1N79_RS09120	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
C1N79_RS09125	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
C1N79_RS09145	COG1804	L-carnitine dehydratase bile acid-inducible protein F
C1N79_RS09155	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
C1N79_RS09170	COG3387	PFAM Glycoside hydrolase 15-related
C1N79_RS09210	COG1024	Enoyl-CoA hydratase
C1N79_RS09225	COG0488	(ABC) transporter
C1N79_RS09245	COG0235	Class ii aldolase
C1N79_RS09260	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
C1N79_RS09265	COG1492	cobalamin metabolic process
C1N79_RS09285	COG1797	cobyrinic acid a,c-diamide synthase activity
C1N79_RS09320	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
C1N79_RS09350	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
C1N79_RS09355	COG0456	acetyltransferase
C1N79_RS09360	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
C1N79_RS09365	COG1917	Cupin 2, conserved barrel domain protein
C1N79_RS09370	COG5285	phytanoyl-CoA dioxygenase
C1N79_RS09400	COG1414	Transcriptional regulator
C1N79_RS09415	COG4585	Histidine kinase
C1N79_RS09420	COG2197	response regulator
C1N79_RS09430	COG1595	DNA-templated transcription, initiation
C1N79_RS09455	COG4677	pectinesterase activity
C1N79_RS09460	COG3866	Pectate lyase
C1N79_RS09465	COG2755	lipolytic protein G-D-S-L family
C1N79_RS09480	COG3507	Belongs to the glycosyl hydrolase 43 family
C1N79_RS09495	COG0395	ABC-type sugar transport system, permease component
C1N79_RS09515	COG1802	Transcriptional regulator
C1N79_RS09535	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
C1N79_RS09540	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
C1N79_RS09545	COG1349	DNA-binding transcription factor activity
C1N79_RS09565	COG1063	alcohol dehydrogenase
C1N79_RS09580	COG1309	transcriptional regulator
C1N79_RS09590	COG1802	Transcriptional regulator
C1N79_RS09630	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
C1N79_RS09645	COG2171	N-acyltransferase activity
C1N79_RS09650	COG3226	Transcriptional regulator
C1N79_RS09660	COG2151	metal-sulfur cluster biosynthetic enzyme
C1N79_RS09665	COG0822	iron-sulfur transferase activity
C1N79_RS09670	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
C1N79_RS09675	COG0396	ATPase activity
C1N79_RS09685	COG0719	Fe-S assembly protein
C1N79_RS09700	COG2746	aminoglycoside 3-N-acetyltransferase activity
C1N79_RS09705	COG1131	(ABC) transporter
C1N79_RS09730	COG0109	protoheme IX farnesyltransferase activity
C1N79_RS09745	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
C1N79_RS09760	COG0363	glucosamine-6-phosphate deaminase activity
C1N79_RS09770	COG0148	phosphopyruvate hydratase activity
C1N79_RS09775	COG0395	ABC-type sugar transport system, permease component
C1N79_RS09780	COG1175	transmembrane transport
C1N79_RS09785	COG1653	transport
C1N79_RS09790	COG0366	Alpha amylase catalytic
C1N79_RS09795	COG1653	transport
C1N79_RS09800	COG1695	Transcriptional regulator
C1N79_RS09805	COG1136	(ABC) transporter
C1N79_RS09815	COG0166	Belongs to the GPI family
C1N79_RS09825	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
C1N79_RS09830	COG0149	triose-phosphate isomerase activity
C1N79_RS09835	COG0126	phosphoglycerate kinase activity
C1N79_RS09840	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
C1N79_RS09850	COG1481	regulation of sporulation
C1N79_RS09855	COG0391	Required for morphogenesis under gluconeogenic growth conditions
C1N79_RS09860	COG1660	Displays ATPase and GTPase activities
C1N79_RS09865	COG0322	excinuclease ABC activity
C1N79_RS09890	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
C1N79_RS09905	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
C1N79_RS09910	COG1619	proteins homologs of microcin C7 resistance protein MccF
C1N79_RS09915	COG0387	Pfam Sodium calcium exchanger
C1N79_RS09935	COG0556	nucleotide-excision repair
C1N79_RS09945	COG0584	glycerophosphoryl diester phosphodiesterase
C1N79_RS09950	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
C1N79_RS09960	COG2313	pseudouridylate synthase activity
C1N79_RS09970	COG2226	methyltransferase
C1N79_RS09975	COG0598	Magnesium transport protein CorA
C1N79_RS10025	COG0402	S-adenosylhomocysteine deaminase activity
C1N79_RS10050	COG2267	carboxylic ester hydrolase activity
C1N79_RS10065	COG2226	methyltransferase
C1N79_RS10080	COG0237	dephospho-CoA kinase activity
C1N79_RS10090	COG0539	negative regulation of cytoplasmic translation
C1N79_RS10095	COG2226	methyltransferase
C1N79_RS10100	COG1643	Atp-dependent helicase
C1N79_RS10130	COG2050	protein possibly involved in aromatic compounds catabolism
C1N79_RS10190	COG0737	Belongs to the 5'-nucleotidase family
C1N79_RS10210	COG1605	Chorismate mutase
C1N79_RS10210	COG0287	Prephenate dehydrogenase
C1N79_RS10225	COG2304	oxidoreductase activity
C1N79_RS10245	COG0067	glutamate synthase
C1N79_RS10245	COG0069	glutamate synthase activity
C1N79_RS10245	COG0070	glutamate synthase
C1N79_RS10275	COG1804	L-carnitine dehydratase bile acid-inducible protein F
C1N79_RS10280	COG2301	Belongs to the HpcH HpaI aldolase family
C1N79_RS10285	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
C1N79_RS10295	COG0159	tryptophan synthase activity
C1N79_RS10300	COG0133	tryptophan synthase activity
C1N79_RS10310	COG0134	indole-3-glycerol-phosphate synthase activity
C1N79_RS10335	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
C1N79_RS10350	COG0107	imidazoleglycerol-phosphate synthase activity
C1N79_RS10355	COG0251	oxidation-reduction process
C1N79_RS10360	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
C1N79_RS10365	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
C1N79_RS10370	COG0131	Imidazoleglycerol-phosphate dehydratase
C1N79_RS10375	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
C1N79_RS10380	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
C1N79_RS10400	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
C1N79_RS10420	COG1432	Conserved Protein
C1N79_RS10430	COG0587	DNA-directed DNA polymerase activity
C1N79_RS10480	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
C1N79_RS10495	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
C1N79_RS10500	COG3599	regulation of cell shape
C1N79_RS10510	COG1799	cell septum assembly
C1N79_RS10520	COG1496	oxidoreductase activity
C1N79_RS10525	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
C1N79_RS10530	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
C1N79_RS10535	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
C1N79_RS10545	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
C1N79_RS10550	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
C1N79_RS10560	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
C1N79_RS10565	COG0768	penicillin binding
C1N79_RS10575	COG0275	rRNA processing
C1N79_RS10585	COG0714	Associated with various cellular activities
C1N79_RS10605	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
C1N79_RS10615	COG1129	ABC transporter
C1N79_RS10625	COG1309	transcriptional regulator
C1N79_RS10645	COG0352	thiamine-phosphate diphosphorylase activity
C1N79_RS10665	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C1N79_RS10665	COG2022	thiamine diphosphate biosynthetic process
C1N79_RS10675	COG2022	thiamine diphosphate biosynthetic process
C1N79_RS10680	COG2815	serine threonine protein kinase
C1N79_RS10680	COG0515	serine threonine protein kinase
C1N79_RS10685	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
C1N79_RS10690	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
C1N79_RS10695	COG2193	ferroxidase activity
C1N79_RS10705	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
C1N79_RS10720	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
C1N79_RS10730	COG2197	response regulator
C1N79_RS10735	COG4585	Histidine kinase
C1N79_RS10760	COG1940	carbohydrate kinase activity
C1N79_RS10770	COG0003	Pfam Anion-transporting ATPase
C1N79_RS10790	COG0438	transferase activity, transferring glycosyl groups
C1N79_RS10810	COG3103	Sh3 type 3 domain protein
C1N79_RS10810	COG0791	NLP P60 protein
C1N79_RS10810	COG1388	LysM domain
C1N79_RS10840	COG2205	protein histidine kinase activity
C1N79_RS10845	COG0745	RESPONSE REGULATOR receiver
C1N79_RS10855	COG1929	Belongs to the glycerate kinase type-1 family
C1N79_RS10860	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
C1N79_RS10865	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
C1N79_RS10870	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
C1N79_RS10875	COG0723	plastoquinol--plastocyanin reductase activity
C1N79_RS10880	COG2010	Cytochrome c
C1N79_RS10885	COG1845	cytochrome c oxidase, subunit III
C1N79_RS10895	COG1376	ErfK ybiS ycfS ynhG family protein
C1N79_RS10905	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
C1N79_RS10910	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
C1N79_RS10920	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C1N79_RS10940	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
C1N79_RS10950	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
C1N79_RS10955	COG2197	response regulator
C1N79_RS10960	COG4585	Histidine kinase
C1N79_RS10980	COG2226	methyltransferase
C1N79_RS10985	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
C1N79_RS11005	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
C1N79_RS11020	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
C1N79_RS11030	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
C1N79_RS11035	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
C1N79_RS11040	COG0508	dehydrogenase complex catalyzes the overall conversion of
C1N79_RS11050	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
C1N79_RS11075	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
C1N79_RS11100	COG0321	lipoyl(octanoyl) transferase activity
C1N79_RS11105	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
C1N79_RS11125	COG0174	glutamine synthetase
C1N79_RS11165	COG0745	RESPONSE REGULATOR receiver
C1N79_RS11185	COG2197	response regulator
C1N79_RS11235	COG0366	Alpha amylase catalytic
C1N79_RS11240	COG3833	ABC-type maltose transport systems, permease component
C1N79_RS11245	COG1175	transmembrane transport
C1N79_RS11250	COG1653	transport
C1N79_RS11255	COG1609	Transcriptional regulator
C1N79_RS11265	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
C1N79_RS11275	COG2161	toxin-antitoxin pair type II binding
C1N79_RS11280	COG4115	mRNA cleavage
C1N79_RS11295	COG0604	alcohol dehydrogenase
C1N79_RS11295	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS11295	COG3321	synthase
C1N79_RS11300	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
C1N79_RS11300	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
C1N79_RS11320	COG0174	glutamine synthetase
C1N79_RS11375	COG2814	Major facilitator Superfamily
C1N79_RS11385	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
C1N79_RS11410	COG1994	Peptidase M50
C1N79_RS11470	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C1N79_RS11475	COG1120	ATPase activity
C1N79_RS11505	COG3293	Transposase
C1N79_RS11515	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
C1N79_RS11520	COG2814	Major facilitator Superfamily
C1N79_RS11530	COG3540	Alkaline phosphatase
C1N79_RS11535	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS11585	COG0789	Transcriptional regulator
C1N79_RS11595	COG3022	response to hydroperoxide
C1N79_RS11600	COG0800	Aldolase
C1N79_RS11615	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
C1N79_RS11630	COG2030	dehydratase
C1N79_RS11635	COG1131	(ABC) transporter
C1N79_RS11645	COG4585	Histidine kinase
C1N79_RS11650	COG2197	response regulator
C1N79_RS11660	COG0477	Major facilitator Superfamily
C1N79_RS11670	COG2247	cell wall binding repeat
C1N79_RS11670	COG0860	N-Acetylmuramoyl-L-alanine amidase
C1N79_RS11695	COG0438	transferase activity, transferring glycosyl groups
C1N79_RS11700	COG1309	transcriptional regulator
C1N79_RS11720	COG3845	ABC transporter
C1N79_RS11755	COG0477	Major facilitator Superfamily
C1N79_RS11760	COG4122	O-methyltransferase activity
C1N79_RS11795	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
C1N79_RS11865	COG4585	Histidine kinase
C1N79_RS11870	COG0586	Pfam SNARE associated Golgi protein
C1N79_RS11880	COG1358	cellular component organization or biogenesis
C1N79_RS11930	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
C1N79_RS11940	COG0477	Major facilitator Superfamily
C1N79_RS11955	COG0667	Aldo Keto reductase
C1N79_RS11960	COG0789	Transcriptional regulator
C1N79_RS11990	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
C1N79_RS11995	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
C1N79_RS12000	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
C1N79_RS12040	COG1764	response to oxidative stress
C1N79_RS12045	COG2130	NADP-dependent
C1N79_RS12085	COG1129	ABC transporter
C1N79_RS12090	COG4214	carbohydrate transport
C1N79_RS12100	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
C1N79_RS12105	COG3507	Belongs to the glycosyl hydrolase 43 family
C1N79_RS12110	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
C1N79_RS12130	COG0395	ABC-type sugar transport system, permease component
C1N79_RS12135	COG1175	transmembrane transport
C1N79_RS12165	COG3386	PFAM SMP-30 Gluconolaconase
C1N79_RS12170	COG1414	Transcriptional regulator
C1N79_RS12185	COG2186	Transcriptional regulator
C1N79_RS12195	COG0318	PFAM AMP-dependent synthetase and ligase
C1N79_RS12200	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
C1N79_RS12200	COG0825	malonyl-CoA metabolic process
C1N79_RS12205	COG1404	Belongs to the peptidase S8 family
C1N79_RS12230	COG1077	Cell shape determining protein MreB Mrl
C1N79_RS12265	COG1070	Carbohydrate kinase
C1N79_RS12290	COG0358	DNA primase activity
C1N79_RS12300	COG0232	Belongs to the dGTPase family. Type 2 subfamily
C1N79_RS12310	COG2949	membrane
C1N79_RS12315	COG0243	molybdopterin cofactor binding
C1N79_RS12345	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
C1N79_RS12350	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
C1N79_RS12350	COG2146	nitrite reductase [NAD(P)H] activity
C1N79_RS12370	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
C1N79_RS12370	COG0574	Belongs to the PEP-utilizing enzyme family
C1N79_RS12405	COG0477	Major facilitator Superfamily
C1N79_RS12420	COG0423	glycine-tRNA ligase activity
C1N79_RS12425	COG0803	Belongs to the bacterial solute-binding protein 9 family
C1N79_RS12425	COG3443	Belongs to the bacterial solute-binding protein 9 family
C1N79_RS12430	COG1121	(ABC) transporter
C1N79_RS12435	COG1108	ABC-type Mn2 Zn2 transport systems permease components
C1N79_RS12445	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
C1N79_RS12450	COG1381	Involved in DNA repair and RecF pathway recombination
C1N79_RS12485	COG2197	response regulator
C1N79_RS12490	COG4585	Histidine kinase
C1N79_RS12495	COG2409	Drug exporters of the RND superfamily
C1N79_RS12545	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
C1N79_RS12570	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
C1N79_RS12580	COG2315	Protein conserved in bacteria
C1N79_RS12615	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
C1N79_RS12620	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C1N79_RS12630	COG4948	Mandelate Racemase Muconate Lactonizing
C1N79_RS12635	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
C1N79_RS12640	COG1414	Transcriptional regulator
C1N79_RS12650	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
C1N79_RS12655	COG1234	tRNA 3'-trailer cleavage
C1N79_RS12660	COG0537	adenosine 5'-monophosphoramidase activity
C1N79_RS12665	COG4946	Tricorn protease homolog
C1N79_RS12665	COG0793	Belongs to the peptidase S41A family
C1N79_RS12685	COG0484	heat shock protein binding
C1N79_RS12690	COG1420	regulation of RNA biosynthetic process
C1N79_RS12720	COG0481	GTPase activity
C1N79_RS12725	COG0268	Binds directly to 16S ribosomal RNA
C1N79_RS12740	COG2353	YceI-like domain
C1N79_RS12750	COG1234	tRNA 3'-trailer cleavage
C1N79_RS12755	COG1555	photosystem II stabilization
C1N79_RS12760	COG1307	EDD domain protein, DegV family
C1N79_RS12770	COG0495	leucyl-tRNA aminoacylation
C1N79_RS12785	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
C1N79_RS12810	COG0588	phosphoglycerate mutase activity
C1N79_RS12815	COG0799	negative regulation of ribosome biogenesis
C1N79_RS12825	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
C1N79_RS12840	COG0501	Belongs to the peptidase M48B family
C1N79_RS12855	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
C1N79_RS12865	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
C1N79_RS12880	COG1216	Glycosyl transferase, family 2
C1N79_RS12885	COG0463	Glycosyl transferase, family 2
C1N79_RS12885	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
C1N79_RS12890	COG0438	transferase activity, transferring glycosyl groups
C1N79_RS12895	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
C1N79_RS12900	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
C1N79_RS12905	COG0211	Belongs to the bacterial ribosomal protein bL27 family
C1N79_RS12910	COG0261	This protein binds to 23S rRNA in the presence of protein L20
C1N79_RS12915	COG0371	Dehydrogenase
C1N79_RS12920	COG1530	ribonuclease E activity
C1N79_RS12940	COG0772	Belongs to the SEDS family
C1N79_RS12945	COG0768	penicillin binding
C1N79_RS12960	COG1077	Cell shape determining protein MreB Mrl
C1N79_RS12965	COG0105	UTP biosynthetic process
C1N79_RS12975	COG0285	dihydrofolate synthase activity
C1N79_RS12980	COG0525	valine-tRNA ligase activity
C1N79_RS12990	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
C1N79_RS12995	COG0740	serine-type endopeptidase activity
C1N79_RS13000	COG0740	serine-type endopeptidase activity
C1N79_RS13005	COG0544	peptidyl-prolyl cis-trans isomerase activity
C1N79_RS13025	COG3594	Acyltransferase
C1N79_RS13040	COG4552	Acetyltransferase involved in intracellular survival and related
C1N79_RS13055	COG1113	amino acid transport
C1N79_RS13060	COG1268	BioY protein
C1N79_RS13065	COG1113	amino acid transport
C1N79_RS13070	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
C1N79_RS13080	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
C1N79_RS13140	COG0697	spore germination
C1N79_RS13145	COG1846	Transcriptional regulator
C1N79_RS13170	COG0668	transmembrane transport
C1N79_RS13180	COG1486	melibiose metabolic process
C1N79_RS13195	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C1N79_RS13225	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
C1N79_RS13245	COG0577	efflux transmembrane transporter activity
C1N79_RS13245	COG1136	(ABC) transporter
C1N79_RS13270	COG0629	single-stranded DNA binding
C1N79_RS13305	COG2304	oxidoreductase activity
C1N79_RS13335	COG0297	glycogen (starch) synthase activity
C1N79_RS13340	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
C1N79_RS13350	COG0728	peptidoglycan biosynthetic process
C1N79_RS13360	COG0297	glycogen (starch) synthase activity
C1N79_RS13380	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
C1N79_RS13450	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
C1N79_RS13475	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
C1N79_RS13485	COG0640	Transcriptional regulator
C1N79_RS13490	COG1595	DNA-templated transcription, initiation
C1N79_RS13500	COG1609	Transcriptional regulator
C1N79_RS13505	COG1129	ABC transporter
C1N79_RS13515	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C1N79_RS13520	COG1869	D-ribose catabolic process
C1N79_RS13535	COG0673	inositol 2-dehydrogenase activity
C1N79_RS13540	COG1609	Transcriptional regulator
C1N79_RS13550	COG0488	(ABC) transporter
C1N79_RS13565	COG1472	Belongs to the glycosyl hydrolase 3 family
C1N79_RS13615	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
C1N79_RS13620	COG2356	endonuclease I
C1N79_RS13625	COG0028	Belongs to the TPP enzyme family
C1N79_RS13655	COG1946	Acyl-CoA thioesterase
C1N79_RS13665	COG1309	transcriptional regulator
C1N79_RS13670	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
C1N79_RS13685	COG1960	acyl-CoA dehydrogenase activity
C1N79_RS13705	COG3486	L-lysine 6-monooxygenase (NADPH) activity
C1N79_RS13735	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
C1N79_RS13740	COG0589	response to stress
C1N79_RS13750	COG4977	sequence-specific DNA binding
C1N79_RS13755	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
C1N79_RS13780	COG0395	ABC-type sugar transport system, permease component
C1N79_RS13795	COG0745	RESPONSE REGULATOR receiver
C1N79_RS13805	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
C1N79_RS13845	COG1846	Transcriptional regulator
C1N79_RS13885	COG0596	Alpha beta hydrolase
C1N79_RS13885	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
C1N79_RS13905	COG0477	Major facilitator Superfamily
C1N79_RS13920	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C1N79_RS13965	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
C1N79_RS13980	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C1N79_RS13985	COG0765	amino acid transport
C1N79_RS13990	COG0765	amino acid transport
C1N79_RS13995	COG1126	abc transporter atp-binding protein
C1N79_RS14010	COG3397	chitin binding
C1N79_RS14080	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
C1N79_RS14085	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C1N79_RS14090	COG2188	Transcriptional regulator
C1N79_RS14110	COG0673	inositol 2-dehydrogenase activity
C1N79_RS14115	COG4702	Belongs to the UPF0303 family
C1N79_RS14160	COG0270	DNA (cytosine-5-)-methyltransferase activity
C1N79_RS14190	COG1074	ATP-dependent DNA helicase activity
C1N79_RS14230	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
C1N79_RS14250	COG2814	Major facilitator Superfamily
C1N79_RS14255	COG2733	membrane
C1N79_RS14285	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
C1N79_RS14325	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
C1N79_RS14335	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
C1N79_RS14340	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
C1N79_RS14345	COG1263	PTS System
C1N79_RS14350	COG1263	PTS System
C1N79_RS14355	COG1234	tRNA 3'-trailer cleavage
C1N79_RS14385	COG1113	amino acid transport
C1N79_RS14400	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
C1N79_RS14410	COG1335	isochorismatase
C1N79_RS14435	COG1714	RDD family
C1N79_RS14450	COG0277	FAD linked oxidase domain protein
C1N79_RS14460	COG3185	4-Hydroxyphenylpyruvate dioxygenase
C1N79_RS14470	COG1174	glycine betaine transport
C1N79_RS14480	COG1174	glycine betaine transport
C1N79_RS14490	COG3480	Lon protease (S16) C-terminal proteolytic domain
C1N79_RS14520	COG1529	Aldehyde oxidase and xanthine dehydrogenase
C1N79_RS14535	COG3525	Glycosyl hydrolase, family 20, catalytic domain
C1N79_RS14540	COG0395	ABC-type sugar transport system, permease component
C1N79_RS14560	COG1678	Uncharacterized ACR, COG1678
C1N79_RS14565	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
C1N79_RS14570	COG0776	regulation of translation
C1N79_RS14580	COG3973	AAA domain
C1N79_RS14605	COG2223	nitrite transmembrane transporter activity
C1N79_RS14640	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
C1N79_RS14645	COG0793	Belongs to the peptidase S41A family
C1N79_RS14655	COG2884	Cell division ATP-binding protein ftsE
C1N79_RS14670	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
C1N79_RS14675	COG0515	serine threonine protein kinase
C1N79_RS14680	COG0515	serine threonine protein kinase
C1N79_RS14695	COG1175	transmembrane transport
C1N79_RS14700	COG0395	ABC-type sugar transport system, permease component
C1N79_RS14705	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
C1N79_RS14710	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
C1N79_RS14730	COG1764	response to oxidative stress
C1N79_RS14735	COG1846	Transcriptional regulator
C1N79_RS14760	COG1134	teichoic acid transport
C1N79_RS14765	COG2902	Dehydrogenase
C1N79_RS14785	COG0653	protein targeting
C1N79_RS14795	COG3214	Protein conserved in bacteria
C1N79_RS14800	COG2197	response regulator
C1N79_RS14805	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
C1N79_RS14820	COG0823	Involved in the tonB-independent uptake of proteins
C1N79_RS14825	COG5000	phosphorelay sensor kinase activity
C1N79_RS14825	COG5002	protein histidine kinase activity
C1N79_RS14830	COG0745	RESPONSE REGULATOR receiver
C1N79_RS14835	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
C1N79_RS14855	COG0714	Associated with various cellular activities
C1N79_RS14900	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
C1N79_RS14910	COG1482	cell wall glycoprotein biosynthetic process
C1N79_RS14920	COG2835	tetraacyldisaccharide 4'-kinase activity
C1N79_RS14925	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
C1N79_RS14930	COG1620	l-lactate permease
C1N79_RS14970	COG0391	Required for morphogenesis under gluconeogenic growth conditions
C1N79_RS14975	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
C1N79_RS14975	COG0778	Nitroreductase
C1N79_RS15005	COG1316	TRANSCRIPTIONal
C1N79_RS15010	COG1316	TRANSCRIPTIONal
C1N79_RS15015	COG1316	TRANSCRIPTIONal
C1N79_RS15020	COG1316	TRANSCRIPTIONal
C1N79_RS15035	COG1316	TRANSCRIPTIONal
C1N79_RS15040	COG1316	TRANSCRIPTIONal
C1N79_RS15055	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
C1N79_RS15090	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
C1N79_RS15105	COG2205	protein histidine kinase activity
C1N79_RS15110	COG0745	RESPONSE REGULATOR receiver
C1N79_RS15115	COG3104	oligopeptide transport
C1N79_RS15125	COG1366	Belongs to the anti-sigma-factor antagonist family
C1N79_RS15130	COG1191	sigma factor activity
C1N79_RS15140	COG1228	amidohydrolase
C1N79_RS15150	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
C1N79_RS15155	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
C1N79_RS15185	COG2755	lipolytic protein G-D-S-L family
C1N79_RS15190	COG0183	Belongs to the thiolase family
C1N79_RS15230	COG1136	(ABC) transporter
C1N79_RS15235	COG0577	efflux transmembrane transporter activity
C1N79_RS15240	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
C1N79_RS15245	COG1252	NADH dehydrogenase
C1N79_RS15265	COG0148	phosphopyruvate hydratase activity
C1N79_RS15340	COG0577	efflux transmembrane transporter activity
C1N79_RS15345	COG1136	(ABC) transporter
C1N79_RS15350	COG0477	Major facilitator Superfamily
C1N79_RS15360	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
C1N79_RS15390	COG4585	Histidine kinase
C1N79_RS15405	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
C1N79_RS15410	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
C1N79_RS15415	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
C1N79_RS15420	COG0193	aminoacyl-tRNA hydrolase activity
C1N79_RS15430	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
C1N79_RS15440	COG1309	transcriptional regulator
C1N79_RS15450	COG4106	trans-aconitate 2-methyltransferase activity
C1N79_RS15460	COG2197	response regulator
C1N79_RS15470	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
C1N79_RS15515	COG0488	(ABC) transporter
C1N79_RS15520	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
C1N79_RS15525	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
C1N79_RS15535	COG0084	hydrolase, TatD family'
C1N79_RS15570	COG0310	cobalt ion transport
C1N79_RS15580	COG1122	ATPase activity
C1N79_RS15585	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
C1N79_RS15595	COG0442	prolyl-tRNA aminoacylation
C1N79_RS15600	COG2409	Drug exporters of the RND superfamily
C1N79_RS15610	COG0793	Belongs to the peptidase S41A family
C1N79_RS15610	COG4946	Tricorn protease homolog
C1N79_RS15625	COG2267	carboxylic ester hydrolase activity
C1N79_RS15630	COG2072	flavoprotein involved in K transport
C1N79_RS15660	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
C1N79_RS15665	COG0521	Mo-molybdopterin cofactor biosynthetic process
C1N79_RS15665	COG0315	cyclic pyranopterin monophosphate synthase activity
C1N79_RS15670	COG0315	cyclic pyranopterin monophosphate synthase activity
C1N79_RS15680	COG1210	Utp--glucose-1-phosphate uridylyltransferase
C1N79_RS15685	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
C1N79_RS15710	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
C1N79_RS15725	COG1970	mechanosensitive ion channel activity
C1N79_RS15740	COG3191	aminopeptidase activity
C1N79_RS15765	COG1349	DNA-binding transcription factor activity
C1N79_RS15770	COG0477	Major facilitator Superfamily
C1N79_RS15785	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
C1N79_RS15790	COG1247	-acetyltransferase
C1N79_RS15795	COG3384	dioxygenase
C1N79_RS15800	COG1846	Transcriptional regulator
C1N79_RS15820	COG1414	Transcriptional regulator
C1N79_RS15830	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
C1N79_RS15835	COG0569	domain protein
C1N79_RS15865	COG0477	Major facilitator Superfamily
C1N79_RS15885	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
C1N79_RS15935	COG2814	Major facilitator Superfamily
C1N79_RS15945	COG1309	transcriptional regulator
C1N79_RS15950	COG4257	antibiotic catabolic process
C1N79_RS15960	COG2208	phosphoserine phosphatase activity
C1N79_RS15975	COG0386	Belongs to the glutathione peroxidase family
C1N79_RS16000	COG1686	Belongs to the peptidase S11 family
C1N79_RS16015	COG0515	serine threonine protein kinase
C1N79_RS16015	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
C1N79_RS16020	COG0515	serine threonine protein kinase
C1N79_RS16020	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
C1N79_RS16065	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
C1N79_RS16085	COG3903	Transcriptional regulator
C1N79_RS16085	COG3629	intracellular signal transduction
C1N79_RS16095	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
C1N79_RS16095	COG0515	serine threonine protein kinase
C1N79_RS16105	COG1309	transcriptional regulator
C1N79_RS16110	COG1522	sequence-specific DNA binding
C1N79_RS16125	COG0259	pyridoxamine-phosphate oxidase activity
C1N79_RS16135	COG2072	flavoprotein involved in K transport
C1N79_RS16140	COG2271	Major facilitator Superfamily
C1N79_RS16165	COG1366	Belongs to the anti-sigma-factor antagonist family
C1N79_RS16230	COG2945	thiolester hydrolase activity
C1N79_RS16230	COG0596	Alpha beta hydrolase
C1N79_RS16240	COG4821	SIS domain
C1N79_RS16260	COG0259	pyridoxamine-phosphate oxidase activity
C1N79_RS16275	COG0318	PFAM AMP-dependent synthetase and ligase
C1N79_RS16290	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
C1N79_RS16305	COG0515	serine threonine protein kinase
C1N79_RS16305	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
C1N79_RS16330	COG0277	FAD linked oxidase domain protein
C1N79_RS16330	COG0247	lactate metabolic process
C1N79_RS16335	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
C1N79_RS16375	COG0667	Aldo Keto reductase
C1N79_RS16400	COG2252	PERMEase
C1N79_RS16415	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
C1N79_RS16430	COG2814	Major facilitator Superfamily
C1N79_RS16440	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
C1N79_RS16445	COG2107	Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
C1N79_RS16450	COG1278	Cold shock
C1N79_RS16485	COG1061	Type III restriction enzyme res subunit
C1N79_RS16495	COG3973	AAA domain
C1N79_RS16535	COG1737	Transcriptional regulator
C1N79_RS16540	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
C1N79_RS16570	COG0459	protein refolding
C1N79_RS16575	COG1278	Cold shock
C1N79_RS16590	COG0463	Glycosyl transferase, family 2
C1N79_RS16615	COG1940	carbohydrate kinase activity
C1N79_RS16625	COG1105	Belongs to the carbohydrate kinase PfkB family
C1N79_RS16635	COG5001	Diguanylate cyclase
C1N79_RS16635	COG3300	MHYT domain
C1N79_RS16660	COG2197	response regulator
C1N79_RS16665	COG4585	Histidine kinase
C1N79_RS16705	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C1N79_RS16705	COG0723	plastoquinol--plastocyanin reductase activity
C1N79_RS16730	COG0464	growth
C1N79_RS16820	COG3842	ATPase activity
C1N79_RS16845	COG0215	cysteine-tRNA ligase activity
C1N79_RS16850	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
C1N79_RS16855	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
C1N79_RS16865	COG1329	Transcriptional regulator
C1N79_RS16885	COG5002	protein histidine kinase activity
C1N79_RS16920	COG2318	DinB family
C1N79_RS16925	COG0222	ribosome binding
C1N79_RS16930	COG0588	phosphoglycerate mutase activity
C1N79_RS16955	COG0438	transferase activity, transferring glycosyl groups
C1N79_RS16995	COG3293	Transposase
C1N79_RS17000	COG0515	serine threonine protein kinase
C1N79_RS17000	COG2815	serine threonine protein kinase
C1N79_RS17005	COG1733	regulation of RNA biosynthetic process
C1N79_RS17010	COG2084	Dehydrogenase
C1N79_RS17025	COG0546	phosphoglycolate phosphatase activity
C1N79_RS17030	COG0546	phosphoglycolate phosphatase activity
C1N79_RS17035	COG2186	Transcriptional regulator
C1N79_RS17050	COG4552	Acetyltransferase involved in intracellular survival and related
C1N79_RS17065	COG1490	D-aminoacyl-tRNA deacylase activity
C1N79_RS17075	COG0735	belongs to the Fur family
C1N79_RS17080	COG3485	protocatechuate 3,4-dioxygenase
C1N79_RS17100	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS17120	COG2897	thiosulfate sulfurtransferase activity
C1N79_RS17145	COG0745	RESPONSE REGULATOR receiver
C1N79_RS17150	COG1609	Transcriptional regulator
C1N79_RS17155	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
C1N79_RS17160	COG0745	RESPONSE REGULATOR receiver
C1N79_RS17185	COG0737	Belongs to the 5'-nucleotidase family
C1N79_RS17190	COG0456	acetyltransferase
C1N79_RS17220	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
C1N79_RS17230	COG0494	nUDIX hydrolase
C1N79_RS17230	COG0406	alpha-ribazole phosphatase activity
C1N79_RS17250	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
C1N79_RS17255	COG0306	phosphate transporter
C1N79_RS17265	COG1937	Protein conserved in bacteria
C1N79_RS17280	COG0671	phosphoesterase, PA-phosphatase related
C1N79_RS17285	COG0741	lytic transglycosylase activity
C1N79_RS17285	COG1196	nuclear chromosome segregation
C1N79_RS17285	COG0739	heme binding
C1N79_RS17325	COG4585	Histidine kinase
C1N79_RS17330	COG2197	response regulator
C1N79_RS17370	COG1252	NADH dehydrogenase
C1N79_RS17395	COG0579	oxidoreductase
C1N79_RS17400	COG0220	tRNA (guanine-N7-)-methyltransferase activity
C1N79_RS17430	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
C1N79_RS17430	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
C1N79_RS17445	COG0513	Belongs to the DEAD box helicase family
C1N79_RS17480	COG1643	Atp-dependent helicase
C1N79_RS17520	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
C1N79_RS17560	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
C1N79_RS17565	COG0047	phosphoribosylformylglycinamidine synthase activity
C1N79_RS17570	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
C1N79_RS17600	COG3851	Histidine kinase
C1N79_RS17605	COG2197	response regulator
C1N79_RS17615	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
C1N79_RS17630	COG0151	Belongs to the GarS family
C1N79_RS17650	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS17655	COG0583	DNA-binding transcription factor activity
C1N79_RS17660	COG2409	Drug exporters of the RND superfamily
C1N79_RS17665	COG2197	response regulator
C1N79_RS17670	COG4585	Histidine kinase
C1N79_RS17680	COG2372	response to copper ion
C1N79_RS17680	COG1276	copper resistance
C1N79_RS17690	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS17750	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
C1N79_RS17785	COG1191	sigma factor activity
C1N79_RS17790	COG1191	sigma factor activity
C1N79_RS17830	COG3467	pyridoxamine 5'-phosphate
C1N79_RS17840	COG0477	Major facilitator Superfamily
C1N79_RS17845	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
C1N79_RS17855	COG2205	protein histidine kinase activity
C1N79_RS17860	COG0745	RESPONSE REGULATOR receiver
C1N79_RS17875	COG1733	regulation of RNA biosynthetic process
C1N79_RS17880	COG0768	penicillin binding
C1N79_RS17905	COG0784	Response regulator, receiver
C1N79_RS17910	COG1309	transcriptional regulator
C1N79_RS17915	COG2814	Major facilitator Superfamily
C1N79_RS17920	COG0318	PFAM AMP-dependent synthetase and ligase
C1N79_RS17925	COG1595	DNA-templated transcription, initiation
C1N79_RS17950	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
C1N79_RS17985	COG0006	proline dipeptidase activity
C1N79_RS18005	COG1999	signal sequence binding
C1N79_RS18020	COG2837	iron assimilation
C1N79_RS18025	COG0077	Prephenate dehydratase
C1N79_RS18030	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
C1N79_RS18035	COG0561	phosphatase activity
C1N79_RS18055	COG1131	(ABC) transporter
C1N79_RS18075	COG0561	phosphatase activity
C1N79_RS18080	COG0739	heme binding
C1N79_RS18090	COG4988	ABC transporter
C1N79_RS18095	COG1294	oxidase, subunit
C1N79_RS18100	COG1271	oxidase subunit
C1N79_RS18110	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
C1N79_RS18115	COG1609	Transcriptional regulator
C1N79_RS18130	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
C1N79_RS18155	COG0662	Cupin 2, conserved barrel domain protein
C1N79_RS18160	COG1950	PFAM Membrane protein of
C1N79_RS18165	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
C1N79_RS18170	COG0626	cystathionine gamma-synthase activity
C1N79_RS18195	COG2814	Major facilitator Superfamily
C1N79_RS18215	COG0305	Participates in initiation and elongation during chromosome replication
C1N79_RS18225	COG0359	binds to the 23S rRNA
C1N79_RS18230	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
C1N79_RS18235	COG0629	single-stranded DNA binding
C1N79_RS18240	COG0360	Binds together with S18 to 16S ribosomal RNA
C1N79_RS18265	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
C1N79_RS18295	COG0617	tRNA 3'-terminal CCA addition
C1N79_RS18315	COG1595	DNA-templated transcription, initiation
C1N79_RS18325	COG0492	ferredoxin-NADP+ reductase activity
C1N79_RS18330	COG3118	belongs to the thioredoxin family
C1N79_RS18345	COG1192	Involved in chromosome partitioning
C1N79_RS18350	COG0357	Ribosomal RNA small subunit methyltransferase G
C1N79_RS18360	COG0706	membrane insertase activity
C1N79_RS18365	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
C1N79_RS18370	COG0594	ribonuclease P activity
C1N79_RS18375	COG0230	Belongs to the bacterial ribosomal protein bL34 family
C1N79_RS18380	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
C1N79_RS18390	COG0592	DNA-directed DNA polymerase activity
C1N79_RS18395	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
C1N79_RS18400	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
C1N79_RS18405	COG5512	Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives
C1N79_RS18410	COG0187	DNA topoisomerase II activity
C1N79_RS18415	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
C1N79_RS18430	COG4249	Peptidase C14 caspase catalytic subunit p20
C1N79_RS18430	COG2319	Wd-40 repeat
C1N79_RS18475	COG0515	serine threonine protein kinase
C1N79_RS18495	COG0431	NADPH-dependent FMN reductase
C1N79_RS18500	COG1045	serine acetyltransferase
C1N79_RS18515	COG0151	Belongs to the GarS family
C1N79_RS18525	COG1942	4-Oxalocrotonate Tautomerase
C1N79_RS18545	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
C1N79_RS18560	COG0705	Rhomboid family
C1N79_RS18585	COG3764	Sortase (surface protein transpeptidase)
C1N79_RS18590	COG3764	Sortase (surface protein transpeptidase)
C1N79_RS18595	COG0515	serine threonine protein kinase
C1N79_RS18605	COG0768	penicillin binding
C1N79_RS18620	COG1716	ATPase activity
C1N79_RS18625	COG1716	ATPase activity
C1N79_RS18675	COG1250	3-hydroxyacyl-CoA dehydrogenase
C1N79_RS18680	COG1309	transcriptional regulator
C1N79_RS18685	COG1522	sequence-specific DNA binding
C1N79_RS18730	COG3321	synthase
C1N79_RS18730	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS18730	COG0604	alcohol dehydrogenase
C1N79_RS18745	COG0515	serine threonine protein kinase
C1N79_RS18750	COG0515	serine threonine protein kinase
C1N79_RS18770	COG0022	dehydrogenase e1 component
C1N79_RS18775	COG0508	dehydrogenase complex catalyzes the overall conversion of
C1N79_RS18795	COG2186	Transcriptional regulator
C1N79_RS18830	COG1362	aminopeptidase activity
C1N79_RS18835	COG1960	acyl-CoA dehydrogenase activity
C1N79_RS18845	COG1741	Belongs to the pirin family
C1N79_RS18860	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
C1N79_RS18880	COG0326	Molecular chaperone. Has ATPase activity
C1N79_RS18890	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
C1N79_RS18940	COG1653	transport
C1N79_RS18965	COG0366	Alpha amylase catalytic
C1N79_RS18990	COG0583	DNA-binding transcription factor activity
C1N79_RS19050	COG0513	Belongs to the DEAD box helicase family
C1N79_RS19055	COG1278	Cold shock
C1N79_RS19095	COG0475	glutathione-regulated potassium exporter activity
C1N79_RS19095	COG0569	domain protein
C1N79_RS19115	COG0640	Transcriptional regulator
C1N79_RS19170	COG0717	Belongs to the dCTP deaminase family
C1N79_RS19175	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
C1N79_RS19185	COG2181	nitrate reductase activity
C1N79_RS19185	COG0247	lactate metabolic process
C1N79_RS19190	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
C1N79_RS19195	COG0443	Heat shock 70 kDa protein
C1N79_RS19200	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
C1N79_RS19205	COG0484	heat shock protein binding
C1N79_RS19210	COG0789	Transcriptional regulator
C1N79_RS19235	COG1132	(ABC) transporter
C1N79_RS19265	COG2226	methyltransferase
C1N79_RS19270	COG0612	Peptidase, M16
C1N79_RS19285	COG4213	ABC transporter substrate-binding protein
C1N79_RS19310	COG0542	response to heat
C1N79_RS19340	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
C1N79_RS19345	COG4585	Histidine kinase
C1N79_RS19350	COG2197	response regulator
C1N79_RS19365	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
C1N79_RS19370	COG0191	fructose-bisphosphate aldolase activity
C1N79_RS19375	COG0477	Major facilitator Superfamily
C1N79_RS19390	COG3844	kynureninase activity
C1N79_RS19415	COG4585	Histidine kinase
C1N79_RS19420	COG2197	response regulator
C1N79_RS19425	COG4585	Histidine kinase
C1N79_RS19430	COG2197	response regulator
C1N79_RS19440	COG3559	Exporter of polyketide antibiotics
C1N79_RS19445	COG1131	(ABC) transporter
C1N79_RS19460	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
C1N79_RS19475	COG1595	DNA-templated transcription, initiation
C1N79_RS19490	COG1802	Transcriptional regulator
C1N79_RS19500	COG0693	protein deglycase activity
C1N79_RS19515	COG4249	Peptidase C14 caspase catalytic subunit p20
C1N79_RS19515	COG2319	Wd-40 repeat
C1N79_RS19530	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
C1N79_RS19535	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
C1N79_RS19555	COG1595	DNA-templated transcription, initiation
C1N79_RS19580	COG1585	Membrane protein implicated in regulation of membrane protease activity
C1N79_RS19600	COG3655	Transcriptional regulator
C1N79_RS19620	COG3263	regulation of cellular component size
C1N79_RS19640	COG0515	serine threonine protein kinase
C1N79_RS19650	COG1132	(ABC) transporter
C1N79_RS19655	COG1132	(ABC) transporter
C1N79_RS19660	COG2197	response regulator
C1N79_RS19665	COG1115	amino acid carrier protein
C1N79_RS19685	COG2255	four-way junction helicase activity
C1N79_RS19730	COG1609	Transcriptional regulator
C1N79_RS19790	COG1408	metallophosphoesterase
C1N79_RS19800	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
C1N79_RS19815	COG0003	Pfam Anion-transporting ATPase
C1N79_RS19830	COG0251	oxidation-reduction process
C1N79_RS19835	COG0596	Alpha beta hydrolase
C1N79_RS19845	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
C1N79_RS19875	COG2267	carboxylic ester hydrolase activity
C1N79_RS19885	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
C1N79_RS19890	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
C1N79_RS19960	COG1366	Belongs to the anti-sigma-factor antagonist family
C1N79_RS19965	COG2172	sigma factor antagonist activity
C1N79_RS19970	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
C1N79_RS19980	COG2264	protein methyltransferase activity
C1N79_RS19990	COG1754	DNA topoisomerase type I activity
C1N79_RS19990	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
C1N79_RS19995	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
C1N79_RS20000	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
C1N79_RS20020	COG3903	Transcriptional regulator
C1N79_RS20020	COG3629	intracellular signal transduction
C1N79_RS20045	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
C1N79_RS20050	COG0227	Belongs to the bacterial ribosomal protein bL28 family
C1N79_RS20055	COG0267	Belongs to the bacterial ribosomal protein bL33 family
C1N79_RS20060	COG0254	rRNA binding
C1N79_RS20070	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
C1N79_RS20095	COG1012	belongs to the aldehyde dehydrogenase family
C1N79_RS20115	COG0076	glutamate decarboxylase activity
C1N79_RS20120	COG0789	Transcriptional regulator
C1N79_RS20125	COG0393	Putative heavy-metal-binding
C1N79_RS20130	COG0586	Pfam SNARE associated Golgi protein
C1N79_RS20140	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
C1N79_RS20145	COG2027	D-alanyl-D-alanine carboxypeptidase
C1N79_RS20155	COG0037	tRNA processing
C1N79_RS20170	COG0302	gtp cyclohydrolase
C1N79_RS20185	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
C1N79_RS20210	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
C1N79_RS20210	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
C1N79_RS20235	COG0649	NAD binding
C1N79_RS20250	COG2197	response regulator
C1N79_RS20255	COG1660	Displays ATPase and GTPase activities
C1N79_RS20285	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
C1N79_RS20290	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
C1N79_RS20300	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
C1N79_RS20325	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
C1N79_RS20360	COG0739	heme binding
C1N79_RS20375	COG2205	protein histidine kinase activity
C1N79_RS20380	COG0745	RESPONSE REGULATOR receiver
C1N79_RS20390	COG1595	DNA-templated transcription, initiation
C1N79_RS20395	COG1194	a g-specific adenine glycosylase
C1N79_RS20400	COG4585	Histidine kinase
C1N79_RS20410	COG0671	phosphoesterase, PA-phosphatase related
C1N79_RS20425	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
C1N79_RS20450	COG0248	Ppx GppA phosphatase
C1N79_RS20455	COG1082	Xylose isomerase domain protein TIM barrel
C1N79_RS20460	COG1309	transcriptional regulator
C1N79_RS20465	COG0129	dihydroxy-acid dehydratase activity
C1N79_RS20470	COG0515	serine threonine protein kinase
C1N79_RS20470	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
C1N79_RS20495	COG1129	ABC transporter
C1N79_RS20495	COG0842	Transport permease protein
C1N79_RS20505	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
C1N79_RS20515	COG0180	Tryptophanyl-tRNA synthetase
C1N79_RS20540	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
C1N79_RS20550	COG2223	nitrite transmembrane transporter activity
C1N79_RS20555	COG0123	including yeast histone deacetylase and acetoin utilization protein
C1N79_RS20605	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
C1N79_RS20610	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
C1N79_RS20615	COG0181	hydroxymethylbilane synthase activity
C1N79_RS20620	COG1648	precorrin-2 dehydrogenase activity
C1N79_RS20620	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
C1N79_RS20640	COG0113	porphobilinogen synthase activity
C1N79_RS20660	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
C1N79_RS20670	COG0018	arginyl-trna synthetase
C1N79_RS20675	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
C1N79_RS20695	COG1690	Belongs to the RtcB family
C1N79_RS20705	COG1742	UPF0060 membrane protein
C1N79_RS20710	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C1N79_RS20715	COG0431	NADPH-dependent FMN reductase
C1N79_RS20720	COG0745	RESPONSE REGULATOR receiver
C1N79_RS20780	COG1695	Transcriptional regulator
C1N79_RS20785	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
C1N79_RS20790	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
C1N79_RS20805	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
C1N79_RS20810	COG0406	alpha-ribazole phosphatase activity
C1N79_RS20820	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
C1N79_RS20825	COG0785	Cytochrome C biogenesis protein
C1N79_RS20830	COG1333	cytochrome c biogenesis protein
C1N79_RS20835	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
C1N79_RS20845	COG0789	Transcriptional regulator
C1N79_RS20880	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
C1N79_RS20885	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
C1N79_RS20890	COG0163	prenyltransferase activity
C1N79_RS20900	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
C1N79_RS20905	COG1573	uracil-dna glycosylase
C1N79_RS20920	COG1301	dicarboxylic acid transport
C1N79_RS20930	COG1309	transcriptional regulator
C1N79_RS20935	COG1309	transcriptional regulator
C1N79_RS20950	COG0183	Belongs to the thiolase family
C1N79_RS20965	COG1278	Cold shock
C1N79_RS20970	COG1427	Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
C1N79_RS20980	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
C1N79_RS20980	COG0515	serine threonine protein kinase
C1N79_RS20985	COG1674	ftsk spoiiie
C1N79_RS21085	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
C1N79_RS21165	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
C1N79_RS21195	COG2226	methyltransferase
C1N79_RS21210	COG0242	peptide deformylase activity
C1N79_RS21215	COG0791	NLP P60 protein
C1N79_RS21215	COG1388	LysM domain
C1N79_RS21215	COG3103	Sh3 type 3 domain protein
C1N79_RS21225	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
C1N79_RS21230	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
C1N79_RS21235	COG0649	NAD binding
C1N79_RS21245	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
C1N79_RS21250	COG1034	ATP synthesis coupled electron transport
C1N79_RS21255	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
C1N79_RS21260	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
C1N79_RS21270	COG0713	ATP synthesis coupled electron transport
C1N79_RS21275	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
C1N79_RS21285	COG1007	ATP synthesis coupled electron transport
C1N79_RS21295	COG0514	ATP-dependent DNA helicase (RecQ)
C1N79_RS21310	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
C1N79_RS21355	COG0561	phosphatase activity
C1N79_RS21365	COG0142	geranyltranstransferase activity
C1N79_RS21375	COG1131	(ABC) transporter
C1N79_RS21415	COG0702	epimerase
C1N79_RS21420	COG2826	transposase and inactivated derivatives, IS30 family
C1N79_RS21425	COG1013	pyruvate-flavodoxin oxidoreductase activity
C1N79_RS21430	COG0674	pyruvate-flavodoxin oxidoreductase activity
C1N79_RS21430	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
C1N79_RS21450	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
C1N79_RS21455	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
C1N79_RS21460	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
C1N79_RS21465	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
C1N79_RS21470	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
C1N79_RS21480	COG0713	ATP synthesis coupled electron transport
C1N79_RS21485	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
C1N79_RS21495	COG1007	ATP synthesis coupled electron transport
C1N79_RS21500	COG0501	Belongs to the peptidase M48B family
C1N79_RS21505	COG3304	Inner membrane component domain
C1N79_RS21510	COG2261	transglycosylase associated protein
C1N79_RS21515	COG1666	GTP binding
C1N79_RS21530	COG0702	epimerase
C1N79_RS21535	COG0402	S-adenosylhomocysteine deaminase activity
C1N79_RS21550	COG0267	Belongs to the bacterial ribosomal protein bL33 family
C1N79_RS21555	COG2030	dehydratase
C1N79_RS21570	COG0477	Major facilitator Superfamily
C1N79_RS21580	COG0812	UDP-N-acetylmuramate dehydrogenase activity
C1N79_RS21585	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
C1N79_RS21600	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
C1N79_RS21605	COG0436	Aminotransferase
C1N79_RS21620	COG0250	Participates in transcription elongation, termination and antitermination
C1N79_RS21625	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
C1N79_RS21630	COG0081	regulation of translation
C1N79_RS21645	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
C1N79_RS21650	COG0222	ribosome binding
C1N79_RS21660	COG0085	RNA polymerase activity
C1N79_RS21665	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
C1N79_RS21675	COG0463	Glycosyl transferase, family 2
C1N79_RS21680	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
C1N79_RS21685	COG0049	tRNA binding
C1N79_RS21690	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
C1N79_RS21695	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
C1N79_RS21710	COG0577	efflux transmembrane transporter activity
C1N79_RS21715	COG1136	(ABC) transporter
C1N79_RS21720	COG4585	Histidine kinase
C1N79_RS21725	COG2197	response regulator
C1N79_RS21770	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS21780	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
C1N79_RS21785	COG1278	Cold shock
C1N79_RS21790	COG0513	Belongs to the DEAD box helicase family
C1N79_RS21825	COG3209	COG3209 Rhs family protein
C1N79_RS21835	COG0051	transcription antitermination factor activity, RNA binding
C1N79_RS21840	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
C1N79_RS21845	COG0088	Forms part of the polypeptide exit tunnel
C1N79_RS21850	COG0089	rRNA binding
C1N79_RS21855	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
C1N79_RS21860	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
C1N79_RS21865	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
C1N79_RS21870	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
C1N79_RS21875	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
C1N79_RS21880	COG0255	Belongs to the universal ribosomal protein uL29 family
C1N79_RS21885	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
C1N79_RS21890	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
C1N79_RS21895	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
C1N79_RS21900	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
C1N79_RS21905	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
C1N79_RS21915	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
C1N79_RS21920	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
C1N79_RS21925	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
C1N79_RS21930	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
C1N79_RS21935	COG1841	ribosomal large subunit assembly
C1N79_RS21940	COG0200	Binds to the 23S rRNA
C1N79_RS21945	COG0201	protein transport
C1N79_RS21950	COG0563	adenylate kinase activity
C1N79_RS21970	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
C1N79_RS21975	COG0257	Belongs to the bacterial ribosomal protein bL36 family
C1N79_RS21980	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
C1N79_RS21985	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
C1N79_RS21990	COG0202	RNA polymerase activity
C1N79_RS21995	COG0203	ribosomal protein L17
C1N79_RS22000	COG0101	tRNA pseudouridine synthase activity
C1N79_RS22015	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
C1N79_RS22020	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
C1N79_RS22025	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
C1N79_RS22035	COG1072	(Pantothenic acid kinase))
C1N79_RS22045	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
C1N79_RS22055	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
C1N79_RS22055	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
C1N79_RS22065	COG0736	holo-[acyl-carrier-protein] synthase activity
C1N79_RS22070	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
C1N79_RS22080	COG0802	atpase or kinase
C1N79_RS22090	COG1214	PFAM Peptidase M22, glycoprotease
C1N79_RS22090	COG0456	acetyltransferase
C1N79_RS22100	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
C1N79_RS22115	COG1609	Transcriptional regulator
C1N79_RS22120	COG1316	TRANSCRIPTIONal
C1N79_RS22130	COG0726	polysaccharide deacetylase
C1N79_RS22135	COG0726	polysaccharide deacetylase
C1N79_RS22140	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
C1N79_RS22145	COG0459	protein refolding
C1N79_RS22150	COG1278	Cold shock
C1N79_RS22155	COG4221	oxidoreductase activity
C1N79_RS22165	COG0583	DNA-binding transcription factor activity
C1N79_RS22180	COG1595	DNA-templated transcription, initiation
C1N79_RS22190	COG0516	GMP reductase activity
C1N79_RS22200	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
C1N79_RS22210	COG0515	serine threonine protein kinase
C1N79_RS22210	COG2815	serine threonine protein kinase
C1N79_RS22215	COG0515	serine threonine protein kinase
C1N79_RS22225	COG0515	serine threonine protein kinase
C1N79_RS22235	COG1012	belongs to the aldehyde dehydrogenase family
C1N79_RS22255	COG0518	GMP synthase (glutamine-hydrolyzing) activity
C1N79_RS22255	COG0519	Catalyzes the synthesis of GMP from XMP
C1N79_RS22290	COG2197	response regulator
C1N79_RS22295	COG0791	NLP P60 protein
C1N79_RS22320	COG0739	heme binding
C1N79_RS22330	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
C1N79_RS22330	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
C1N79_RS22345	COG0714	Associated with various cellular activities
C1N79_RS22350	COG2425	protein containing a von Willebrand factor type A (vWA) domain
C1N79_RS22355	COG3552	Protein containing von Willebrand factor type A (VWA) domain
C1N79_RS22375	COG0045	succinate-CoA ligase (ADP-forming) activity
C1N79_RS22405	COG0138	bifunctional purine biosynthesis protein purh
C1N79_RS22430	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
C1N79_RS22445	COG0039	L-malate dehydrogenase activity
C1N79_RS22450	COG1012	belongs to the aldehyde dehydrogenase family
C1N79_RS22460	COG0517	IMP dehydrogenase activity
C1N79_RS22460	COG4175	Glycine betaine
C1N79_RS22480	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
C1N79_RS22485	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
C1N79_RS22495	COG0754	glutathionylspermidine amidase activity
C1N79_RS22500	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
C1N79_RS22505	COG0180	Tryptophanyl-tRNA synthetase
C1N79_RS22525	COG0671	phosphoesterase, PA-phosphatase related
C1N79_RS22540	COG1295	ribonuclease BN
C1N79_RS22545	COG1686	Belongs to the peptidase S11 family
C1N79_RS22555	COG1408	metallophosphoesterase
C1N79_RS22560	COG1309	transcriptional regulator
C1N79_RS22600	COG1053	succinate dehydrogenase
C1N79_RS22610	COG2009	succinate dehydrogenase
C1N79_RS22650	COG1595	DNA-templated transcription, initiation
C1N79_RS22665	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
C1N79_RS22665	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
C1N79_RS22695	COG1216	Glycosyl transferase, family 2
C1N79_RS22705	COG1216	Glycosyl transferase, family 2
C1N79_RS22720	COG2089	acid synthase
C1N79_RS22730	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
C1N79_RS22730	COG1473	amidohydrolase
C1N79_RS22735	COG1744	ABC transporter substrate-binding protein PnrA-like
C1N79_RS22740	COG1744	ABC transporter substrate-binding protein PnrA-like
C1N79_RS22745	COG3845	ABC transporter
C1N79_RS22750	COG4603	Belongs to the binding-protein-dependent transport system permease family
C1N79_RS22755	COG1079	Belongs to the binding-protein-dependent transport system permease family
C1N79_RS22790	COG2814	Major facilitator Superfamily
C1N79_RS22795	COG0583	DNA-binding transcription factor activity
C1N79_RS22805	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
C1N79_RS22830	COG2205	protein histidine kinase activity
C1N79_RS22835	COG0745	RESPONSE REGULATOR receiver
C1N79_RS22840	COG1595	DNA-templated transcription, initiation
C1N79_RS22855	COG1012	belongs to the aldehyde dehydrogenase family
C1N79_RS22860	COG1012	belongs to the aldehyde dehydrogenase family
C1N79_RS22880	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
C1N79_RS22905	COG4770	biotin carboxylase activity
C1N79_RS22915	COG0424	maF-like protein
C1N79_RS22930	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
C1N79_RS22940	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
C1N79_RS22950	COG1024	Enoyl-CoA hydratase
C1N79_RS22960	COG2986	histidine ammonia-lyase
C1N79_RS22980	COG1064	alcohol dehydrogenase
C1N79_RS22985	COG1090	epimerase
C1N79_RS22990	COG0667	Aldo Keto reductase
C1N79_RS23000	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
C1N79_RS23025	COG2255	four-way junction helicase activity
C1N79_RS23030	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
C1N79_RS23045	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
C1N79_RS23055	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
C1N79_RS23085	COG0590	tRNA wobble adenosine to inosine editing
C1N79_RS23110	COG1331	Highly conserved protein containing a thioredoxin domain
C1N79_RS23145	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
C1N79_RS23180	COG0436	Aminotransferase
C1N79_RS23185	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
C1N79_RS23200	COG1414	Transcriptional regulator
C1N79_RS23205	COG0251	oxidation-reduction process
C1N79_RS23210	COG2610	gluconate transmembrane transporter activity
C1N79_RS23245	COG3209	COG3209 Rhs family protein
C1N79_RS23245	COG4104	PAAR repeat-containing protein
C1N79_RS23270	COG2894	cell division
C1N79_RS23300	COG3920	Histidine kinase
C1N79_RS23305	COG2197	response regulator
C1N79_RS23385	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
C1N79_RS23400	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
C1N79_RS23405	COG0450	alkyl hydroperoxide reductase
C1N79_RS23420	COG1136	(ABC) transporter
C1N79_RS23430	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
C1N79_RS23445	COG0114	fumarate hydratase activity
C1N79_RS23450	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
C1N79_RS23450	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
C1N79_RS23475	COG0778	Nitroreductase
C1N79_RS23485	COG1722	exodeoxyribonuclease VII activity
C1N79_RS23490	COG1570	exodeoxyribonuclease VII activity
C1N79_RS23500	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
C1N79_RS23515	COG0012	GTP binding
C1N79_RS23580	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
C1N79_RS23585	COG1053	succinate dehydrogenase
C1N79_RS23605	COG1217	gtp-binding protein TYPA
C1N79_RS23610	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C1N79_RS23615	COG4166	transmembrane transport
C1N79_RS23620	COG0601	transmembrane transport
C1N79_RS23625	COG0444	Belongs to the ABC transporter superfamily
C1N79_RS23630	COG4608	Belongs to the ABC transporter superfamily
C1N79_RS23635	COG4608	Belongs to the ABC transporter superfamily
C1N79_RS23640	COG0444	Belongs to the ABC transporter superfamily
C1N79_RS23645	COG0601	transmembrane transport
C1N79_RS23650	COG0747	negative chemotaxis
C1N79_RS23655	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C1N79_RS23665	COG0601	transmembrane transport
C1N79_RS23670	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C1N79_RS23675	COG0444	Belongs to the ABC transporter superfamily
C1N79_RS23695	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
C1N79_RS23715	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
C1N79_RS23715	COG0456	acetyltransferase
C1N79_RS23740	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
C1N79_RS23750	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
C1N79_RS23760	COG0519	Catalyzes the synthesis of GMP from XMP
C1N79_RS23765	COG1024	Enoyl-CoA hydratase
C1N79_RS23780	COG1595	DNA-templated transcription, initiation
C1N79_RS23790	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
C1N79_RS23795	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
C1N79_RS23820	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
C1N79_RS23830	COG0598	Magnesium transport protein CorA
C1N79_RS23840	COG2814	Major facilitator Superfamily
C1N79_RS23855	COG2095	MarC family integral membrane protein
C1N79_RS23865	COG1432	Conserved Protein
C1N79_RS23875	COG0513	Belongs to the DEAD box helicase family
C1N79_RS23950	COG0596	Alpha beta hydrolase
C1N79_RS23975	COG0210	DNA helicase
C1N79_RS23985	COG2816	NAD+ diphosphatase activity
C1N79_RS24015	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
C1N79_RS24065	COG3480	Lon protease (S16) C-terminal proteolytic domain
C1N79_RS24075	COG1615	UPF0182 protein
C1N79_RS24100	COG0753	catalase activity
C1N79_RS24110	COG0483	inositol monophosphate 1-phosphatase activity
C1N79_RS24125	COG1162	GTPase activity
C1N79_RS24130	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
C1N79_RS24140	COG2135	peptidase activity
C1N79_RS24150	COG1595	DNA-templated transcription, initiation
C1N79_RS24155	COG5662	AntiSigma factor
C1N79_RS24175	COG0242	peptide deformylase activity
C1N79_RS24185	COG2124	cytochrome p450
C1N79_RS24225	COG2188	Transcriptional regulator
C1N79_RS24230	COG2182	Extracellular solute-binding protein
C1N79_RS24235	COG1175	transmembrane transport
C1N79_RS24240	COG0395	ABC-type sugar transport system, permease component
C1N79_RS24245	COG1472	Belongs to the glycosyl hydrolase 3 family
C1N79_RS24250	COG0363	glucosamine-6-phosphate deaminase activity
C1N79_RS24255	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS24275	COG1597	lipid kinase activity
C1N79_RS24305	COG2515	1-aminocyclopropane-1-carboxylate deaminase
C1N79_RS24315	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
C1N79_RS24320	COG0142	geranyltranstransferase activity
C1N79_RS24345	COG4106	trans-aconitate 2-methyltransferase activity
C1N79_RS24350	COG1126	abc transporter atp-binding protein
C1N79_RS24370	COG0281	malic enzyme
C1N79_RS24375	COG0604	alcohol dehydrogenase
C1N79_RS24385	COG0542	response to heat
C1N79_RS24410	COG0567	Dehydrogenase, E1 component
C1N79_RS24410	COG0508	dehydrogenase complex catalyzes the overall conversion of
C1N79_RS24415	COG2205	protein histidine kinase activity
C1N79_RS24420	COG0745	RESPONSE REGULATOR receiver
C1N79_RS24430	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
C1N79_RS24475	COG0791	NLP P60 protein
C1N79_RS24475	COG3883	PFAM NLP P60 protein
C1N79_RS24485	COG1309	transcriptional regulator
C1N79_RS24515	COG2205	protein histidine kinase activity
C1N79_RS24535	COG3285	dna ligase
C1N79_RS24535	COG1793	dna ligase
C1N79_RS24540	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
C1N79_RS24560	COG3467	pyridoxamine 5'-phosphate
C1N79_RS24575	COG2867	negative regulation of translational initiation
C1N79_RS24580	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
C1N79_RS24585	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
C1N79_RS24590	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
C1N79_RS24595	COG0662	Cupin 2, conserved barrel domain protein
C1N79_RS24600	COG2329	Antibiotic biosynthesis monooxygenase
C1N79_RS24610	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C1N79_RS24630	COG0270	DNA (cytosine-5-)-methyltransferase activity
C1N79_RS24640	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
C1N79_RS24650	COG0494	nUDIX hydrolase
C1N79_RS24740	COG0018	arginyl-trna synthetase
C1N79_RS24745	COG0019	diaminopimelate decarboxylase activity
C1N79_RS24750	COG0460	homoserine dehydrogenase
C1N79_RS24755	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
C1N79_RS24760	COG0083	homoserine kinase activity
C1N79_RS24775	COG1316	TRANSCRIPTIONal
C1N79_RS24780	COG0254	rRNA binding
C1N79_RS24785	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
C1N79_RS24790	COG2890	protein-(glutamine-N5) methyltransferase activity
C1N79_RS24800	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
C1N79_RS24805	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
C1N79_RS24825	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
C1N79_RS24830	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
C1N79_RS24835	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
C1N79_RS24840	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
C1N79_RS24845	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
C1N79_RS24850	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
C1N79_RS24855	COG0355	proton-transporting ATP synthase activity, rotational mechanism
C1N79_RS24870	COG2197	response regulator
C1N79_RS24875	COG4585	Histidine kinase
C1N79_RS24905	COG1250	3-hydroxyacyl-CoA dehydrogenase
C1N79_RS24920	COG1637	Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
C1N79_RS24955	COG1131	(ABC) transporter
C1N79_RS24975	COG0183	Belongs to the thiolase family
C1N79_RS24995	COG0745	RESPONSE REGULATOR receiver
C1N79_RS25000	COG2205	protein histidine kinase activity
C1N79_RS25045	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
C1N79_RS25045	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
C1N79_RS25085	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
C1N79_RS25090	COG0857	belongs to the CobB CobQ family
C1N79_RS25090	COG0280	phosphate acetyltransferase
C1N79_RS25095	COG0205	6-phosphofructokinase activity
C1N79_RS25105	COG0395	ABC-type sugar transport system, permease component
C1N79_RS25115	COG1653	transport
C1N79_RS25120	COG4565	transcriptional regulatory protein
C1N79_RS25125	COG2205	protein histidine kinase activity
C1N79_RS25125	COG4191	Histidine kinase
C1N79_RS25125	COG0745	RESPONSE REGULATOR receiver
C1N79_RS25130	COG1301	dicarboxylic acid transport
C1N79_RS25140	COG0492	ferredoxin-NADP+ reductase activity
C1N79_RS25140	COG3118	belongs to the thioredoxin family
C1N79_RS25155	COG3281	Trehalose synthase
C1N79_RS25165	COG0366	Alpha amylase catalytic
C1N79_RS25170	COG0058	SHG alpha-glucan phosphorylase activity
C1N79_RS25185	COG1132	(ABC) transporter
C1N79_RS25190	COG1132	(ABC) transporter
C1N79_RS25195	COG1132	(ABC) transporter
C1N79_RS25200	COG1132	(ABC) transporter
C1N79_RS25205	COG3119	arylsulfatase activity
C1N79_RS25220	COG1376	ErfK ybiS ycfS ynhG family protein
C1N79_RS25250	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
C1N79_RS25255	COG3409	Peptidoglycan-binding domain 1 protein
C1N79_RS25255	COG3757	hydrolase, family 25
C1N79_RS25260	COG0477	Major facilitator Superfamily
C1N79_RS25265	COG4977	sequence-specific DNA binding
C1N79_RS25290	COG1760	l-serine dehydratase
C1N79_RS25295	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
C1N79_RS25300	COG0509	glycine decarboxylation via glycine cleavage system
C1N79_RS25305	COG0404	The glycine cleavage system catalyzes the degradation of glycine
C1N79_RS25325	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C1N79_RS25330	COG4166	transmembrane transport
C1N79_RS25340	COG0444	Belongs to the ABC transporter superfamily
C1N79_RS25345	COG4608	Belongs to the ABC transporter superfamily
C1N79_RS25350	COG2860	membrane
C1N79_RS25360	COG0789	Transcriptional regulator
C1N79_RS25395	COG0482	sulfurtransferase activity
C1N79_RS25410	COG1611	Belongs to the LOG family
C1N79_RS25425	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
C1N79_RS25440	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
C1N79_RS25445	COG0154	amidase activity
C1N79_RS25455	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
C1N79_RS25460	COG2409	Drug exporters of the RND superfamily
C1N79_RS25465	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
C1N79_RS25480	COG2197	response regulator
C1N79_RS25490	COG2133	pyrroloquinoline quinone binding
C1N79_RS25495	COG0667	Aldo Keto reductase
C1N79_RS25505	COG5001	Diguanylate cyclase
C1N79_RS25515	COG0440	acetolactate synthase activity
C1N79_RS25520	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
C1N79_RS25525	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
C1N79_RS25530	COG2508	Transcriptional regulator
C1N79_RS25535	COG0506	proline dehydrogenase activity
C1N79_RS25540	COG1012	belongs to the aldehyde dehydrogenase family
C1N79_RS25550	COG0473	3-isopropylmalate dehydrogenase activity
C1N79_RS25555	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
C1N79_RS25565	COG0832	Belongs to the urease beta subunit family
C1N79_RS25565	COG0831	urea catabolic process
C1N79_RS25570	COG0804	urea catabolic process
C1N79_RS25575	COG2957	Belongs to the agmatine deiminase family
C1N79_RS25585	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
C1N79_RS25620	COG1032	radical SAM domain protein
C1N79_RS25625	COG5492	domain, Protein
C1N79_RS25630	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
C1N79_RS25650	COG2018	Roadblock/LC7 domain
C1N79_RS25670	COG2018	Roadblock/LC7 domain
C1N79_RS25675	COG5002	protein histidine kinase activity
C1N79_RS25685	COG0179	Fumarylacetoacetate (FAA) hydrolase
C1N79_RS25690	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
C1N79_RS25730	COG1414	Transcriptional regulator
C1N79_RS25735	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
C1N79_RS25740	COG0066	3-isopropylmalate dehydratase activity
C1N79_RS25750	COG0776	regulation of translation
C1N79_RS25760	COG1920	GTP binding
C1N79_RS25770	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
C1N79_RS25775	COG1181	Belongs to the D-alanine--D-alanine ligase family
C1N79_RS25790	COG0351	phosphomethylpyrimidine kinase
C1N79_RS25795	COG0227	Belongs to the bacterial ribosomal protein bL28 family
C1N79_RS25800	COG1461	Dihydroxyacetone kinase
C1N79_RS25810	COG0742	ribosomal rna small subunit methyltransferase
C1N79_RS25815	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
C1N79_RS25830	COG0333	Belongs to the bacterial ribosomal protein bL32 family
C1N79_RS25835	COG0571	ribonuclease III activity
C1N79_RS25840	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
C1N79_RS25845	COG1733	regulation of RNA biosynthetic process
C1N79_RS25850	COG2340	Cysteine-rich secretory protein family
C1N79_RS25855	COG1254	Belongs to the acylphosphatase family
C1N79_RS25875	COG1196	nuclear chromosome segregation
C1N79_RS25880	COG0477	Major facilitator Superfamily
C1N79_RS25915	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
C1N79_RS25925	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
C1N79_RS25945	COG0228	four-way junction DNA binding
C1N79_RS25950	COG1837	Belongs to the UPF0109 family
C1N79_RS25955	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
C1N79_RS25960	COG0336	Belongs to the RNA methyltransferase TrmD family
C1N79_RS25965	COG0335	large ribosomal subunit rRNA binding
C1N79_RS25980	COG0681	Belongs to the peptidase S26 family
C1N79_RS26000	COG0792	nuclease activity
C1N79_RS26250	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
C1N79_RS26430	COG1191	sigma factor activity
C1N79_RS26445	COG0052	Belongs to the universal ribosomal protein uS2 family
C1N79_RS26450	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
C1N79_RS26455	COG0528	UMP kinase activity
C1N79_RS26460	COG0233	cytoplasmic translational termination
C1N79_RS26465	COG0575	Belongs to the CDS family
C1N79_RS26480	COG0820	rRNA (adenine-C2-)-methyltransferase activity
C1N79_RS26490	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
C1N79_RS26495	COG3842	ATPase activity
C1N79_RS26530	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
C1N79_RS26540	COG1012	belongs to the aldehyde dehydrogenase family
C1N79_RS26560	COG0584	glycerophosphoryl diester phosphodiesterase
C1N79_RS26565	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
C1N79_RS26590	COG3842	ATPase activity
C1N79_RS26595	COG1176	ABC-type spermidine putrescine transport system, permease component I
C1N79_RS26600	COG1177	transmembrane transport
C1N79_RS26605	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C1N79_RS26640	COG2508	Transcriptional regulator
C1N79_RS26645	COG1012	belongs to the aldehyde dehydrogenase family
C1N79_RS26655	COG2226	methyltransferase
C1N79_RS26660	COG1472	Belongs to the glycosyl hydrolase 3 family
C1N79_RS26670	COG4209	transmembrane transport
C1N79_RS26675	COG0395	ABC-type sugar transport system, permease component
C1N79_RS26710	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
C1N79_RS26715	COG0750	zinc metalloprotease
C1N79_RS26720	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
C1N79_RS26735	COG0442	prolyl-tRNA aminoacylation
C1N79_RS26760	COG0779	Required for maturation of 30S ribosomal subunits
C1N79_RS26775	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
C1N79_RS26785	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
C1N79_RS26790	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
C1N79_RS26805	COG0455	bacterial-type flagellum organization
C1N79_RS26820	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
C1N79_RS26825	COG1185	polyribonucleotide nucleotidyltransferase activity
C1N79_RS26830	COG0612	Peptidase, M16
C1N79_RS26835	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
C1N79_RS26855	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
C1N79_RS26860	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
C1N79_RS26865	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
C1N79_RS26900	COG2770	Histidine kinase
C1N79_RS26900	COG2208	phosphoserine phosphatase activity
C1N79_RS26910	COG3850	Histidine kinase
C1N79_RS26910	COG2205	protein histidine kinase activity
C1N79_RS26910	COG3437	response regulator, receiver
C1N79_RS26910	COG4999	Histidine kinase
C1N79_RS26920	COG1674	ftsk spoiiie
C1N79_RS26930	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
C1N79_RS26940	COG1546	Belongs to the CinA family
C1N79_RS26940	COG1058	Belongs to the CinA family
C1N79_RS26945	COG1396	sequence-specific DNA binding
C1N79_RS26950	COG0783	Belongs to the Dps family
C1N79_RS26965	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
C1N79_RS26970	COG1201	RNA secondary structure unwinding
C1N79_RS26975	COG1917	Cupin 2, conserved barrel domain protein
C1N79_RS26975	COG2207	Transcriptional regulator
C1N79_RS27000	COG0628	permease
C1N79_RS27020	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
C1N79_RS27035	COG0765	amino acid transport
C1N79_RS27040	COG0765	amino acid transport
C1N79_RS27045	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C1N79_RS27050	COG1126	abc transporter atp-binding protein
C1N79_RS27055	COG0745	RESPONSE REGULATOR receiver
C1N79_RS27060	COG2205	protein histidine kinase activity
C1N79_RS27090	COG3851	Histidine kinase
C1N79_RS27095	COG2197	response regulator
C1N79_RS27100	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
C1N79_RS27120	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
C1N79_RS27130	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
C1N79_RS27135	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
C1N79_RS27145	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
C1N79_RS27180	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
C1N79_RS27185	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
C1N79_RS27190	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
C1N79_RS27205	COG0588	phosphoglycerate mutase activity
C1N79_RS27230	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
C1N79_RS27270	COG2186	Transcriptional regulator
C1N79_RS27275	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
C1N79_RS27290	COG0187	DNA topoisomerase II activity
C1N79_RS27300	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
C1N79_RS27305	COG4565	transcriptional regulatory protein
C1N79_RS27310	COG3290	protein histidine kinase activity
C1N79_RS27335	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
C1N79_RS27340	COG0612	Peptidase, M16
C1N79_RS27355	COG1802	Transcriptional regulator
C1N79_RS27360	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1N79_RS27365	COG0045	succinate-CoA ligase (ADP-forming) activity
C1N79_RS27365	COG1042	CoA-binding domain protein
C1N79_RS27365	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
C1N79_RS27380	COG1435	thymidine kinase activity
C1N79_RS27415	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
C1N79_RS27425	COG0745	RESPONSE REGULATOR receiver
C1N79_RS27430	COG2205	protein histidine kinase activity
C1N79_RS27455	COG0756	dUTP diphosphatase activity
C1N79_RS27465	COG1136	(ABC) transporter
C1N79_RS27465	COG4591	ABC-type transport system involved in lipoprotein release permease component
C1N79_RS27495	COG0569	domain protein
C1N79_RS27500	COG0531	amino acid
C1N79_RS27505	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
C1N79_RS27515	COG3654	unkown
C1N79_RS27555	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
C1N79_RS27555	COG0515	serine threonine protein kinase
C1N79_RS27560	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
C1N79_RS27575	COG1476	TRANSCRIPTIONal
C1N79_RS27605	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
C1N79_RS27640	COG3693	PFAM glycoside hydrolase, family 10
C1N79_RS27670	COG0456	acetyltransferase
C1N79_RS27680	COG0531	amino acid
C1N79_RS27695	COG0477	Major facilitator Superfamily
C1N79_RS27700	COG1122	ATPase activity
C1N79_RS27710	COG1930	Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import
C1N79_RS27715	COG0310	cobalt ion transport
C1N79_RS27720	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
C1N79_RS27735	COG1799	cell septum assembly
C1N79_RS27765	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
C1N79_RS27775	COG2255	four-way junction helicase activity
C1N79_RS27785	COG0475	glutathione-regulated potassium exporter activity
C1N79_RS27810	COG2235	arginine
C1N79_RS27815	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
C1N79_RS27820	COG0531	amino acid
C1N79_RS27830	COG1024	Enoyl-CoA hydratase
C1N79_RS27890	COG4977	sequence-specific DNA binding
C1N79_RS27915	COG3293	Transposase
C1N79_RS27925	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
C1N79_RS27935	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
C1N79_RS27950	COG1653	transport
C1N79_RS27955	COG1175	transmembrane transport
C1N79_RS27960	COG0395	ABC-type sugar transport system, permease component
C1N79_RS27965	COG1940	carbohydrate kinase activity
C1N79_RS27970	COG4213	ABC transporter substrate-binding protein
C1N79_RS27980	COG4214	carbohydrate transport
C1N79_RS27990	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
C1N79_RS27995	COG0531	amino acid
C1N79_RS28030	COG1215	transferase activity, transferring glycosyl groups
C1N79_RS28030	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
C1N79_RS28035	COG2755	lipolytic protein G-D-S-L family
C1N79_RS28050	COG1250	3-hydroxyacyl-CoA dehydrogenase
C1N79_RS28050	COG1024	Enoyl-CoA hydratase
C1N79_RS28055	COG0183	Belongs to the thiolase family
C1N79_RS28060	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
C1N79_RS28075	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
C1N79_RS28105	COG0076	glutamate decarboxylase activity
C1N79_RS28130	COG1472	Belongs to the glycosyl hydrolase 3 family
C1N79_RS28170	COG0446	pyridine nucleotide-disulphide oxidoreductase
C1N79_RS28180	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
C1N79_RS28185	COG3253	May function as heme-dependent peroxidase
C1N79_RS28200	COG3220	belongs to the UPF0276 family
C1N79_RS28225	COG0723	plastoquinol--plastocyanin reductase activity
C1N79_RS28225	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C1N79_RS28235	COG0330	HflC and HflK could
C1N79_RS28275	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
C1N79_RS28280	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
C1N79_RS28285	COG2205	protein histidine kinase activity
C1N79_RS28290	COG0745	RESPONSE REGULATOR receiver
C1N79_RS28300	COG1174	glycine betaine transport
C1N79_RS28305	COG1174	glycine betaine transport
C1N79_RS28310	COG1732	Glycine betaine
C1N79_RS28355	COG1309	transcriptional regulator
C1N79_RS28370	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
C1N79_RS28450	COG2409	Drug exporters of the RND superfamily
C1N79_RS28470	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
C1N79_RS28490	COG0529	Catalyzes the synthesis of activated sulfate
C1N79_RS28495	COG0175	sulfate reduction
C1N79_RS28525	COG1960	acyl-CoA dehydrogenase activity
C1N79_RS28540	COG4977	sequence-specific DNA binding
C1N79_RS28540	COG1917	Cupin 2, conserved barrel domain protein
C1N79_RS28560	COG1131	(ABC) transporter
C1N79_RS28600	COG0714	Associated with various cellular activities
C1N79_RS28615	COG2040	homocysteine
C1N79_RS28630	COG2197	response regulator
C1N79_RS28640	COG2755	lipolytic protein G-D-S-L family
C1N79_RS28655	COG1309	transcriptional regulator
C1N79_RS28675	COG0277	FAD linked oxidase domain protein
C1N79_RS28685	COG1162	GTPase activity
C1N79_RS28695	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
C1N79_RS28720	COG0028	Belongs to the TPP enzyme family
C1N79_RS28740	COG1802	Transcriptional regulator
C1N79_RS28745	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
C1N79_RS28755	COG2197	response regulator
C1N79_RS28760	COG3851	Histidine kinase
C1N79_RS28790	COG3835	regulator
C1N79_RS28800	COG2252	PERMEase
C1N79_RS28820	COG0726	polysaccharide deacetylase
C1N79_RS28830	COG2192	nodulation
C1N79_RS28845	COG0859	PFAM glycosyl transferase family 9
C1N79_RS28850	COG0438	transferase activity, transferring glycosyl groups
C1N79_RS28855	COG0297	glycogen (starch) synthase activity
C1N79_RS28860	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
C1N79_RS28865	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
C1N79_RS28865	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
C1N79_RS28905	COG1595	DNA-templated transcription, initiation
C1N79_RS28940	COG2197	response regulator
C1N79_RS28945	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
C1N79_RS28950	COG0318	PFAM AMP-dependent synthetase and ligase
C1N79_RS28960	COG3960	tartronate-semialdehyde synthase activity
C1N79_RS28975	COG0753	catalase activity
C1N79_RS28980	COG2084	Dehydrogenase
C1N79_RS28985	COG3622	Belongs to the hyi family
C1N79_RS29005	COG2351	hydroxyisourate hydrolase activity
C1N79_RS29015	COG2233	PERMEase
C1N79_RS29025	COG2233	PERMEase
C1N79_RS29040	COG0406	alpha-ribazole phosphatase activity
C1N79_RS29065	COG4264	IucA IucC family
C1N79_RS29080	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
C1N79_RS29095	COG1414	Transcriptional regulator
C1N79_RS29100	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
C1N79_RS29105	COG4266	Belongs to the allantoicase family
C1N79_RS29110	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS29130	COG2197	response regulator
C1N79_RS29135	COG0673	inositol 2-dehydrogenase activity
C1N79_RS29140	COG2188	Transcriptional regulator
C1N79_RS29160	COG1940	carbohydrate kinase activity
C1N79_RS29170	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
C1N79_RS29185	COG1250	3-hydroxyacyl-CoA dehydrogenase
C1N79_RS29190	COG3246	L-lysine catabolic process to acetate
C1N79_RS29210	COG2267	carboxylic ester hydrolase activity
C1N79_RS29220	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
C1N79_RS29240	COG0726	polysaccharide deacetylase
C1N79_RS29290	COG1366	Belongs to the anti-sigma-factor antagonist family
C1N79_RS29300	COG0248	Ppx GppA phosphatase
C1N79_RS29310	COG0531	amino acid
C1N79_RS29315	COG2235	arginine
C1N79_RS29320	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
C1N79_RS29325	COG0549	Belongs to the carbamate kinase family
C1N79_RS29340	COG0490	domain, Protein
C1N79_RS29340	COG2985	domain, Protein
C1N79_RS29345	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
C1N79_RS29345	COG4651	solute:proton antiporter activity
C1N79_RS29355	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
C1N79_RS29365	COG1454	alcohol dehydrogenase
C1N79_RS29365	COG1012	belongs to the aldehyde dehydrogenase family
C1N79_RS29375	COG0516	GMP reductase activity
C1N79_RS29375	COG0517	IMP dehydrogenase activity
C1N79_RS29385	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
C1N79_RS29385	COG0574	Belongs to the PEP-utilizing enzyme family
C1N79_RS29400	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
C1N79_RS29410	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
C1N79_RS29455	COG0517	IMP dehydrogenase activity
C1N79_RS29490	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
C1N79_RS29500	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
C1N79_RS29515	COG2175	clavaminate synthase activity
C1N79_RS29520	COG1132	(ABC) transporter
C1N79_RS29525	COG0510	thiamine kinase activity
C1N79_RS29535	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
C1N79_RS29565	COG2197	response regulator
C1N79_RS29570	COG4585	Histidine kinase
C1N79_RS29610	COG3903	Transcriptional regulator
C1N79_RS29610	COG3629	intracellular signal transduction
C1N79_RS29615	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
C1N79_RS29620	COG4122	O-methyltransferase activity
C1N79_RS29625	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
C1N79_RS29630	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
C1N79_RS29630	COG0512	Glutamine amidotransferase of anthranilate synthase
C1N79_RS29635	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
C1N79_RS29640	COG0134	indole-3-glycerol-phosphate synthase activity
C1N79_RS29645	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
C1N79_RS29650	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
C1N79_RS29655	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
C1N79_RS29675	COG0405	Gamma-glutamyltransferase
C1N79_RS29680	COG0542	response to heat
C1N79_RS29700	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
C1N79_RS29715	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
C1N79_RS29725	COG1953	Uracil, thiamine, allantoin
C1N79_RS29745	COG3851	Histidine kinase
C1N79_RS29750	COG2197	response regulator
C1N79_RS29755	COG0095	Lipoate-protein ligase
C1N79_RS29775	COG0483	inositol monophosphate 1-phosphatase activity
C1N79_RS29780	COG2249	NAD(P)H dehydrogenase (quinone) activity
C1N79_RS29795	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
C1N79_RS29810	COG0601	transmembrane transport
C1N79_RS29815	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C1N79_RS29820	COG0444	Belongs to the ABC transporter superfamily
C1N79_RS29830	COG3540	Alkaline phosphatase
C1N79_RS29845	COG0640	Transcriptional regulator
C1N79_RS29865	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
C1N79_RS29875	COG1929	Belongs to the glycerate kinase type-1 family
C1N79_RS29885	COG0688	phosphatidylethanolamine metabolic process
C1N79_RS29890	COG1960	acyl-CoA dehydrogenase activity
C1N79_RS29900	COG2301	Belongs to the HpcH HpaI aldolase family
C1N79_RS29905	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
C1N79_RS29905	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
C1N79_RS29910	COG0604	alcohol dehydrogenase
C1N79_RS29920	COG1250	3-hydroxyacyl-CoA dehydrogenase
C1N79_RS29935	COG0596	Alpha beta hydrolase
C1N79_RS29955	COG1366	Belongs to the anti-sigma-factor antagonist family
C1N79_RS29955	COG2172	sigma factor antagonist activity
C1N79_RS29955	COG2208	phosphoserine phosphatase activity
C1N79_RS29960	COG2226	methyltransferase
C1N79_RS29965	COG2362	D-Aminopeptidase
C1N79_RS29970	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
C1N79_RS29975	COG0823	Involved in the tonB-independent uptake of proteins
C1N79_RS29975	COG1506	peptidase
C1N79_RS29975	COG4946	Tricorn protease homolog
C1N79_RS29980	COG1619	proteins homologs of microcin C7 resistance protein MccF
C1N79_RS30010	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C1N79_RS30025	COG1793	dna ligase
C1N79_RS30025	COG3285	dna ligase
C1N79_RS30090	COG1597	lipid kinase activity
C1N79_RS30095	COG0488	(ABC) transporter
C1N79_RS30110	COG0693	protein deglycase activity
C1N79_RS30120	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
C1N79_RS30175	COG0531	amino acid
C1N79_RS30205	COG1140	nitrate reductase beta subunit
C1N79_RS30235	COG2154	pterin-4-alpha-carbinolamine dehydratase
C1N79_RS30240	COG4106	trans-aconitate 2-methyltransferase activity
C1N79_RS30240	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
C1N79_RS30245	COG3401	FG-GAP repeat protein
C1N79_RS30260	COG5297	Belongs to the glycosyl hydrolase family 6
C1N79_RS30260	COG4733	cellulase activity
C1N79_RS30270	COG5297	Belongs to the glycosyl hydrolase family 6
C1N79_RS30280	COG0656	L-ascorbic acid biosynthetic process
C1N79_RS30305	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
C1N79_RS30315	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
C1N79_RS30320	COG3383	formate dehydrogenase (NAD+) activity
C1N79_RS30325	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
C1N79_RS30335	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
C1N79_RS30350	COG1129	ABC transporter
C1N79_RS30355	COG1172	Belongs to the binding-protein-dependent transport system permease family
C1N79_RS30365	COG0673	inositol 2-dehydrogenase activity
C1N79_RS30385	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
C1N79_RS30420	COG2223	nitrite transmembrane transporter activity
C1N79_RS30430	COG1804	L-carnitine dehydratase bile acid-inducible protein F
C1N79_RS30440	COG0045	succinate-CoA ligase (ADP-forming) activity
C1N79_RS30450	COG1012	belongs to the aldehyde dehydrogenase family
C1N79_RS30465	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
C1N79_RS30485	COG0714	Associated with various cellular activities
C1N79_RS30490	COG3552	Protein containing von Willebrand factor type A (VWA) domain
C1N79_RS30505	COG4632	Exopolysaccharide biosynthesis protein
C1N79_RS30505	COG5434	Belongs to the glycosyl hydrolase 28 family
C1N79_RS30525	COG0210	DNA helicase
C1N79_RS30540	COG0747	negative chemotaxis
C1N79_RS30545	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C1N79_RS30570	COG0297	glycogen (starch) synthase activity
C1N79_RS30590	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
C1N79_RS30610	COG0477	Major facilitator Superfamily
C1N79_RS30620	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
C1N79_RS30625	COG1082	Xylose isomerase domain protein TIM barrel
C1N79_RS30625	COG3185	4-Hydroxyphenylpyruvate dioxygenase
C1N79_RS30635	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
C1N79_RS30640	COG0166	Belongs to the GPI family
C1N79_RS30655	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
C1N79_RS30685	COG1486	melibiose metabolic process
C1N79_RS30695	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
C1N79_RS30725	COG0477	Major facilitator Superfamily
C1N79_RS30730	COG3511	phospholipase C
C1N79_RS30760	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
C1N79_RS30765	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
C1N79_RS30770	COG3485	protocatechuate 3,4-dioxygenase
C1N79_RS30775	COG3485	protocatechuate 3,4-dioxygenase
C1N79_RS30780	COG0183	Belongs to the thiolase family
C1N79_RS30800	COG1470	cell adhesion involved in biofilm formation
C1N79_RS30810	COG1793	dna ligase
C1N79_RS30815	COG0488	(ABC) transporter
C1N79_RS30855	COG1834	amidinotransferase
C1N79_RS30860	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
C1N79_RS30865	COG0488	(ABC) transporter
C1N79_RS30890	COG1515	deoxyribonuclease V activity
C1N79_RS30900	COG3268	Saccharopine dehydrogenase
C1N79_RS30905	COG1804	L-carnitine dehydratase bile acid-inducible protein F
C1N79_RS30910	COG0183	Belongs to the thiolase family
C1N79_RS30915	COG1250	3-hydroxyacyl-CoA dehydrogenase
C1N79_RS30915	COG1024	Enoyl-CoA hydratase
C1N79_RS30930	COG1113	amino acid transport
C1N79_RS30945	COG2936	dipeptidyl-peptidase activity
C1N79_RS30955	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
C1N79_RS30975	COG0488	(ABC) transporter
C1N79_RS30980	COG2183	response to ionizing radiation
C1N79_RS31000	COG1024	Enoyl-CoA hydratase
C1N79_RS31010	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
C1N79_RS31055	COG1134	teichoic acid transport
C1N79_RS31060	COG1562	ergosterol biosynthetic process
C1N79_RS31070	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
C1N79_RS31080	COG1657	PFAM Prenyltransferase squalene oxidase
C1N79_RS31095	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
C1N79_RS31100	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
C1N79_RS31120	COG2365	Tyrosine phosphatase family
C1N79_RS31130	COG2755	lipolytic protein G-D-S-L family
C1N79_RS31175	COG1063	alcohol dehydrogenase
C1N79_RS31180	COG0156	8-amino-7-oxononanoate synthase activity
C1N79_RS31185	COG0583	DNA-binding transcription factor activity
C1N79_RS31215	COG2111	Na H antiporter
C1N79_RS31215	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
C1N79_RS31220	COG1006	Multisubunit Na H antiporter MnhC subunit
C1N79_RS31225	COG0651	ATP synthesis coupled electron transport
C1N79_RS31240	COG1320	monovalent cation:proton antiporter activity
C1N79_RS31255	COG0174	glutamine synthetase
C1N79_RS31275	COG2267	carboxylic ester hydrolase activity
C1N79_RS31280	COG0183	Belongs to the thiolase family
C1N79_RS31285	COG0318	PFAM AMP-dependent synthetase and ligase
C1N79_RS31325	COG0494	nUDIX hydrolase
C1N79_RS31330	COG2188	Transcriptional regulator
C1N79_RS31335	COG3962	Belongs to the TPP enzyme family
C1N79_RS31340	COG3718	enzyme involved in inositol metabolism
C1N79_RS31350	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C1N79_RS31375	COG2764	glyoxalase bleomycin resistance protein dioxygenase
C1N79_RS31380	COG0673	inositol 2-dehydrogenase activity
C1N79_RS31385	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS31395	COG1609	Transcriptional regulator
C1N79_RS31405	COG0673	inositol 2-dehydrogenase activity
C1N79_RS31415	COG0385	Bile acid
C1N79_RS31430	COG2197	response regulator
C1N79_RS31455	COG2124	cytochrome p450
C1N79_RS31465	COG2838	Isocitrate dehydrogenase
C1N79_RS31470	COG0668	transmembrane transport
C1N79_RS31480	COG1132	(ABC) transporter
C1N79_RS31490	COG0366	Alpha amylase catalytic
C1N79_RS31495	COG0395	ABC-type sugar transport system, permease component
C1N79_RS31500	COG1175	transmembrane transport
C1N79_RS31505	COG1653	transport
C1N79_RS31530	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C1N79_RS31535	COG0404	The glycine cleavage system catalyzes the degradation of glycine
C1N79_RS31535	COG0446	pyridine nucleotide-disulphide oxidoreductase
C1N79_RS31550	COG3938	Belongs to the proline racemase family
C1N79_RS31555	COG1802	Transcriptional regulator
C1N79_RS31560	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C1N79_RS31565	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
C1N79_RS31575	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
C1N79_RS31580	COG4106	trans-aconitate 2-methyltransferase activity
C1N79_RS31590	COG2267	carboxylic ester hydrolase activity
C1N79_RS31595	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
C1N79_RS31605	COG0019	diaminopimelate decarboxylase activity
C1N79_RS31615	COG4865	methylaspartate mutase activity
C1N79_RS31625	COG0477	Major facilitator Superfamily
C1N79_RS31645	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
C1N79_RS31655	COG0667	Aldo Keto reductase
C1N79_RS31695	COG0604	alcohol dehydrogenase
C1N79_RS31695	COG3321	synthase
C1N79_RS31700	COG3321	synthase
C1N79_RS31700	COG0604	alcohol dehydrogenase
C1N79_RS31705	COG0604	alcohol dehydrogenase
C1N79_RS31705	COG3321	synthase
C1N79_RS31720	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
C1N79_RS31735	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
C1N79_RS31760	COG0297	glycogen (starch) synthase activity
C1N79_RS31765	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
C1N79_RS31805	COG1609	Transcriptional regulator
C1N79_RS31810	COG1653	transport
C1N79_RS31815	COG1175	transmembrane transport
C1N79_RS31820	COG0395	ABC-type sugar transport system, permease component
C1N79_RS31850	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
C1N79_RS31885	COG0531	amino acid
C1N79_RS31895	COG0726	polysaccharide deacetylase
C1N79_RS31940	COG0583	DNA-binding transcription factor activity
C1N79_RS31950	COG1053	succinate dehydrogenase
C1N79_RS31955	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
C1N79_RS31980	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C1N79_RS31990	COG3360	Dodecin
C1N79_RS32005	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
C1N79_RS32010	COG0121	glutamine amidotransferase
C1N79_RS32015	COG1262	PFAM Formylglycine-generating sulfatase enzyme
C1N79_RS32025	COG3572	ergothioneine biosynthetic process
C1N79_RS32055	COG3293	Transposase
C1N79_RS32075	COG0596	Alpha beta hydrolase
C1N79_RS32080	COG3629	intracellular signal transduction
C1N79_RS32080	COG3903	Transcriptional regulator
C1N79_RS32100	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
C1N79_RS32125	COG0583	DNA-binding transcription factor activity
C1N79_RS32140	COG1609	Transcriptional regulator
C1N79_RS32145	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
C1N79_RS32155	COG0242	peptide deformylase activity
C1N79_RS32170	COG1683	Conserved Protein
C1N79_RS32210	COG1846	Transcriptional regulator
C1N79_RS32215	COG2409	Drug exporters of the RND superfamily
C1N79_RS32230	COG0668	transmembrane transport
C1N79_RS32270	COG3540	Alkaline phosphatase
C1N79_RS32295	COG1136	(ABC) transporter
C1N79_RS32295	COG0577	efflux transmembrane transporter activity
C1N79_RS32300	COG1556	Lactate utilization protein
C1N79_RS32305	COG1139	Iron-sulfur cluster binding protein
C1N79_RS32310	COG0247	lactate metabolic process
C1N79_RS32315	COG1070	Carbohydrate kinase
C1N79_RS32320	COG3347	Dehydrogenase
C1N79_RS32320	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS32325	COG4952	isomerase
C1N79_RS32330	COG1129	ABC transporter
C1N79_RS32335	COG1172	Belongs to the binding-protein-dependent transport system permease family
C1N79_RS32340	COG1172	Belongs to the binding-protein-dependent transport system permease family
C1N79_RS32355	COG1609	Transcriptional regulator
C1N79_RS32370	COG1357	PFAM Pentapeptide repeats (8 copies)
C1N79_RS32380	COG1309	transcriptional regulator
C1N79_RS32425	COG1796	DNA polymerase
C1N79_RS32425	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
C1N79_RS32430	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS32460	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
C1N79_RS32500	COG2124	cytochrome p450
C1N79_RS32520	COG0435	Glutathione S-transferase
C1N79_RS32540	COG0667	Aldo Keto reductase
C1N79_RS32575	COG1304	FMN binding
C1N79_RS32590	COG2890	protein-(glutamine-N5) methyltransferase activity
C1N79_RS32605	COG0248	Ppx GppA phosphatase
C1N79_RS32650	COG0517	IMP dehydrogenase activity
C1N79_RS32690	COG1132	(ABC) transporter
C1N79_RS32720	COG2182	Extracellular solute-binding protein
C1N79_RS32725	COG0395	ABC-type sugar transport system, permease component
C1N79_RS32730	COG1175	transmembrane transport
C1N79_RS32735	COG1940	carbohydrate kinase activity
C1N79_RS32735	COG1846	Transcriptional regulator
C1N79_RS32765	COG1309	transcriptional regulator
C1N79_RS32840	COG0673	inositol 2-dehydrogenase activity
C1N79_RS32855	COG2508	Transcriptional regulator
C1N79_RS32860	COG0410	ABC transporter
C1N79_RS32865	COG0411	ABC transporter
C1N79_RS32910	COG1132	(ABC) transporter
C1N79_RS32955	COG1529	Aldehyde oxidase and xanthine dehydrogenase
C1N79_RS32960	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
C1N79_RS32965	COG2080	2 iron, 2 sulfur cluster binding
C1N79_RS32975	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS32980	COG1295	ribonuclease BN
C1N79_RS33010	COG0477	Major facilitator Superfamily
C1N79_RS33025	COG3290	protein histidine kinase activity
C1N79_RS33065	COG0277	FAD linked oxidase domain protein
C1N79_RS33070	COG1597	lipid kinase activity
C1N79_RS33095	COG0395	ABC-type sugar transport system, permease component
C1N79_RS33100	COG1175	transmembrane transport
C1N79_RS33110	COG1609	Transcriptional regulator
C1N79_RS33165	COG2264	protein methyltransferase activity
C1N79_RS33185	COG4608	Belongs to the ABC transporter superfamily
C1N79_RS33205	COG3397	chitin binding
C1N79_RS33255	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
C1N79_RS33260	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
C1N79_RS33275	COG1595	DNA-templated transcription, initiation
C1N79_RS33295	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
C1N79_RS33300	COG1937	Protein conserved in bacteria
C1N79_RS33305	COG0730	response to heat
C1N79_RS33315	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
C1N79_RS33350	COG2235	arginine
C1N79_RS33405	COG0505	Belongs to the CarA family
C1N79_RS33435	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
C1N79_RS33440	COG1191	sigma factor activity
C1N79_RS33460	COG0783	Belongs to the Dps family
C1N79_RS33465	COG0655	NAD(P)H dehydrogenase (quinone) activity
C1N79_RS33505	COG4232	protein-disulfide reductase activity
C1N79_RS33510	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
C1N79_RS33510	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
C1N79_RS33530	COG2018	Roadblock/LC7 domain
C1N79_RS33545	COG2124	cytochrome p450
C1N79_RS33550	COG2124	cytochrome p450
C1N79_RS33560	COG2186	Transcriptional regulator
C1N79_RS33570	COG2376	Dihydroxyacetone kinase
C1N79_RS33575	COG0698	ribose 5-phosphate isomerase
C1N79_RS33580	COG0149	triose-phosphate isomerase activity
C1N79_RS33585	COG1082	Xylose isomerase domain protein TIM barrel
C1N79_RS33590	COG2084	Dehydrogenase
C1N79_RS33595	COG3340	Belongs to the peptidase S51 family
C1N79_RS33610	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
C1N79_RS33615	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
C1N79_RS33620	COG0267	Belongs to the bacterial ribosomal protein bL33 family
C1N79_RS33625	COG0142	geranyltranstransferase activity
C1N79_RS33635	COG0142	geranyltranstransferase activity
C1N79_RS33675	COG0789	Transcriptional regulator
C1N79_RS33715	COG0745	RESPONSE REGULATOR receiver
C1N79_RS33720	COG2205	protein histidine kinase activity
C1N79_RS33725	COG2340	Cysteine-rich secretory protein family
C1N79_RS33730	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
C1N79_RS33735	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
C1N79_RS33750	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
C1N79_RS33775	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
C1N79_RS33780	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
C1N79_RS33790	COG0438	transferase activity, transferring glycosyl groups
C1N79_RS33810	COG0667	Aldo Keto reductase
C1N79_RS33825	COG1196	nuclear chromosome segregation
C1N79_RS33825	COG0741	lytic transglycosylase activity
C1N79_RS33825	COG0739	heme binding
C1N79_RS33835	COG1309	transcriptional regulator
C1N79_RS33840	COG0318	PFAM AMP-dependent synthetase and ligase
C1N79_RS33845	COG1960	acyl-CoA dehydrogenase activity
C1N79_RS33850	COG2015	COG2015, Alkyl sulfatase and related hydrolases
C1N79_RS33870	COG0673	inositol 2-dehydrogenase activity
C1N79_RS33880	COG1278	Cold shock
C1N79_RS33895	COG3386	PFAM SMP-30 Gluconolaconase
C1N79_RS33910	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
C1N79_RS33920	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
C1N79_RS33950	COG3486	L-lysine 6-monooxygenase (NADPH) activity
C1N79_RS33955	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C1N79_RS33960	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C1N79_RS33965	COG1120	ATPase activity
C1N79_RS33970	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
C1N79_RS33975	COG1132	(ABC) transporter
C1N79_RS33985	COG1132	(ABC) transporter
C1N79_RS33990	COG2382	esterase
C1N79_RS34015	COG4106	trans-aconitate 2-methyltransferase activity
C1N79_RS34025	COG0477	Major facilitator Superfamily
C1N79_RS34040	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
C1N79_RS34055	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
C1N79_RS34070	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS34075	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS34090	COG0028	Belongs to the TPP enzyme family
C1N79_RS34095	COG1804	L-carnitine dehydratase bile acid-inducible protein F
C1N79_RS34180	COG0604	alcohol dehydrogenase
C1N79_RS34180	COG3321	synthase
C1N79_RS34180	COG3321	synthase
C1N79_RS34180	COG0604	alcohol dehydrogenase
C1N79_RS34210	COG2124	cytochrome p450
C1N79_RS34215	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
C1N79_RS34220	COG0604	alcohol dehydrogenase
C1N79_RS34230	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C1N79_RS34315	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
C1N79_RS34330	COG0667	Aldo Keto reductase
C1N79_RS34335	COG0366	Alpha amylase catalytic
C1N79_RS34335	COG1470	cell adhesion involved in biofilm formation
C1N79_RS34340	COG1609	Transcriptional regulator
C1N79_RS34365	COG2375	cellular response to nickel ion
C1N79_RS34390	COG1984	allophanate hydrolase subunit 2
C1N79_RS34395	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
C1N79_RS34400	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
C1N79_RS34415	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
C1N79_RS34425	COG0667	Aldo Keto reductase
C1N79_RS34430	COG2770	Histidine kinase
C1N79_RS34430	COG2208	phosphoserine phosphatase activity
C1N79_RS34435	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
C1N79_RS34450	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
C1N79_RS34455	COG4247	3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase)
C1N79_RS34465	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
C1N79_RS34475	COG2814	Major facilitator Superfamily
C1N79_RS34480	COG0384	phenazine biosynthesis protein PhzF
C1N79_RS34485	COG1609	Transcriptional regulator
C1N79_RS34495	COG0402	S-adenosylhomocysteine deaminase activity
C1N79_RS34520	COG4221	oxidoreductase activity
C1N79_RS34550	COG1595	DNA-templated transcription, initiation
C1N79_RS34580	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C1N79_RS34585	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
C1N79_RS34615	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
C1N79_RS34630	COG0667	Aldo Keto reductase
C1N79_RS34650	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
C1N79_RS34655	COG0739	heme binding
C1N79_RS34680	COG0583	DNA-binding transcription factor activity
C1N79_RS34705	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C1N79_RS34710	COG0747	negative chemotaxis
C1N79_RS34730	COG0523	cobalamin synthesis protein
C1N79_RS34740	COG0778	Nitroreductase
C1N79_RS34810	COG1595	DNA-templated transcription, initiation
C1N79_RS34865	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
C1N79_RS34880	COG2723	6-phospho-beta-galactosidase activity
C1N79_RS34885	COG3833	ABC-type maltose transport systems, permease component
C1N79_RS34890	COG1175	transmembrane transport
C1N79_RS34895	COG2182	Extracellular solute-binding protein
C1N79_RS34955	COG2197	response regulator
C1N79_RS34960	COG1132	(ABC) transporter
C1N79_RS34965	COG1132	(ABC) transporter
C1N79_RS34975	COG0515	serine threonine protein kinase
C1N79_RS35015	COG3226	Transcriptional regulator
C1N79_RS35020	COG0738	Major facilitator superfamily
C1N79_RS35035	COG4221	oxidoreductase activity
C1N79_RS35040	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
C1N79_RS35070	COG0583	DNA-binding transcription factor activity
C1N79_RS35075	COG1136	(ABC) transporter
C1N79_RS35110	COG2814	Major facilitator Superfamily
C1N79_RS35115	COG4585	Histidine kinase
C1N79_RS35120	COG2197	response regulator
C1N79_RS35130	COG0745	RESPONSE REGULATOR receiver
C1N79_RS35135	COG5002	protein histidine kinase activity
C1N79_RS35150	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
C1N79_RS35170	COG1309	transcriptional regulator
C1N79_RS35180	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS35215	COG2205	protein histidine kinase activity
C1N79_RS35220	COG0745	RESPONSE REGULATOR receiver
C1N79_RS35230	COG1131	(ABC) transporter
C1N79_RS35245	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C1N79_RS35250	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C1N79_RS35255	COG1120	ATPase activity
C1N79_RS35260	COG1132	(ABC) transporter
C1N79_RS35265	COG1132	(ABC) transporter
C1N79_RS35275	COG0644	oxidoreductase
C1N79_RS35335	COG2249	NAD(P)H dehydrogenase (quinone) activity
C1N79_RS35380	COG0583	DNA-binding transcription factor activity
C1N79_RS35405	COG1959	2 iron, 2 sulfur cluster binding
C1N79_RS35425	COG2197	response regulator
C1N79_RS35430	COG4585	Histidine kinase
C1N79_RS35455	COG0477	Major facilitator Superfamily
C1N79_RS35465	COG1609	Transcriptional regulator
C1N79_RS35485	COG4585	Histidine kinase
C1N79_RS35490	COG2197	response regulator
C1N79_RS35500	COG1132	(ABC) transporter
C1N79_RS35530	COG3250	beta-galactosidase activity
C1N79_RS35535	COG0395	ABC-type sugar transport system, permease component
C1N79_RS35540	COG1175	transmembrane transport
C1N79_RS35550	COG1609	Transcriptional regulator
C1N79_RS35555	COG1028	Short-chain dehydrogenase reductase Sdr
C1N79_RS35560	COG1802	Transcriptional regulator
C1N79_RS35565	COG4948	Mandelate Racemase Muconate Lactonizing
C1N79_RS35595	COG1309	transcriptional regulator
C1N79_RS35610	COG1309	transcriptional regulator
C1N79_RS35615	COG0300	oxidoreductase activity
C1N79_RS35635	COG0583	DNA-binding transcription factor activity
C1N79_RS35655	COG0604	alcohol dehydrogenase
C1N79_RS35695	COG2826	transposase and inactivated derivatives, IS30 family
C1N79_RS35730	COG0702	epimerase
C1N79_RS35745	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
C1N79_RS35775	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
C1N79_RS35780	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
C1N79_RS35790	COG2867	negative regulation of translational initiation