locus-tag	class	description
DEJ43_RS00035	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS00060	COG1595	DNA-templated transcription, initiation
DEJ43_RS00080	COG2815	serine threonine protein kinase
DEJ43_RS00080	COG0515	serine threonine protein kinase
DEJ43_RS00085	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DEJ43_RS00120	COG1024	Enoyl-CoA hydratase
DEJ43_RS00130	COG0477	Major facilitator Superfamily
DEJ43_RS00200	COG1609	Transcriptional regulator
DEJ43_RS00220	COG3321	synthase
DEJ43_RS00220	COG0604	alcohol dehydrogenase
DEJ43_RS00220	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS00235	COG0142	geranyltranstransferase activity
DEJ43_RS00250	COG1131	(ABC) transporter
DEJ43_RS00255	COG1278	Cold shock
DEJ43_RS00310	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS00315	COG4948	Mandelate Racemase Muconate Lactonizing
DEJ43_RS00320	COG2186	Transcriptional regulator
DEJ43_RS00335	COG4948	Mandelate Racemase Muconate Lactonizing
DEJ43_RS00340	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DEJ43_RS00345	COG0395	ABC-type sugar transport system, permease component
DEJ43_RS00350	COG1175	transmembrane transport
DEJ43_RS00355	COG1653	transport
DEJ43_RS00360	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DEJ43_RS00410	COG2318	DinB family
DEJ43_RS00440	COG4555	ABC transporter
DEJ43_RS00465	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DEJ43_RS00535	COG1846	Transcriptional regulator
DEJ43_RS00550	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS00580	COG4176	ABC-type proline glycine betaine transport system permease component
DEJ43_RS00585	COG0517	IMP dehydrogenase activity
DEJ43_RS00585	COG4175	Glycine betaine
DEJ43_RS00595	COG1012	belongs to the aldehyde dehydrogenase family
DEJ43_RS00615	COG4989	oxidoreductase activity
DEJ43_RS00640	COG1595	DNA-templated transcription, initiation
DEJ43_RS00655	COG0346	lactoylglutathione lyase activity
DEJ43_RS00670	COG0435	Glutathione S-transferase
DEJ43_RS00675	COG1295	ribonuclease BN
DEJ43_RS00725	COG5006	permease, DMT superfamily
DEJ43_RS00740	COG1846	Transcriptional regulator
DEJ43_RS00755	COG4585	Histidine kinase
DEJ43_RS00760	COG2197	response regulator
DEJ43_RS00765	COG1607	acyl-coa hydrolase
DEJ43_RS00770	COG1309	transcriptional regulator
DEJ43_RS00775	COG0154	amidase activity
DEJ43_RS00785	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DEJ43_RS00790	COG1120	ATPase activity
DEJ43_RS00795	COG0577	efflux transmembrane transporter activity
DEJ43_RS00795	COG1136	(ABC) transporter
DEJ43_RS00815	COG1804	L-carnitine dehydratase bile acid-inducible protein F
DEJ43_RS00845	COG2814	Major facilitator Superfamily
DEJ43_RS00855	COG0656	L-ascorbic acid biosynthetic process
DEJ43_RS00900	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DEJ43_RS00910	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DEJ43_RS00910	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DEJ43_RS00950	COG0367	asparagine synthase
DEJ43_RS00955	COG1012	belongs to the aldehyde dehydrogenase family
DEJ43_RS00965	COG2197	response regulator
DEJ43_RS00980	COG2066	Belongs to the glutaminase family
DEJ43_RS00995	COG0328	RNA-DNA hybrid ribonuclease activity
DEJ43_RS01075	COG0252	asparaginase activity
DEJ43_RS01085	COG2356	endonuclease I
DEJ43_RS01090	COG0456	acetyltransferase
DEJ43_RS01105	COG5285	phytanoyl-CoA dioxygenase
DEJ43_RS01110	COG1191	sigma factor activity
DEJ43_RS01120	COG2226	methyltransferase
DEJ43_RS01135	COG2304	oxidoreductase activity
DEJ43_RS01145	COG2814	Major facilitator Superfamily
DEJ43_RS01150	COG0789	Transcriptional regulator
DEJ43_RS01160	COG2378	regulation of single-species biofilm formation
DEJ43_RS01200	COG2272	Belongs to the type-B carboxylesterase lipase family
DEJ43_RS01210	COG0789	Transcriptional regulator
DEJ43_RS01240	COG3152	Membrane
DEJ43_RS01245	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DEJ43_RS01265	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
DEJ43_RS01360	COG1733	regulation of RNA biosynthetic process
DEJ43_RS01370	COG1357	PFAM Pentapeptide repeats (8 copies)
DEJ43_RS01390	COG2124	cytochrome p450
DEJ43_RS01400	COG0318	PFAM AMP-dependent synthetase and ligase
DEJ43_RS01405	COG2366	antibiotic biosynthetic process
DEJ43_RS01410	COG0387	Pfam Sodium calcium exchanger
DEJ43_RS01435	COG2271	Major facilitator Superfamily
DEJ43_RS01445	COG2814	Major facilitator Superfamily
DEJ43_RS01455	COG2070	2-Nitropropane dioxygenase
DEJ43_RS01460	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DEJ43_RS01470	COG2267	carboxylic ester hydrolase activity
DEJ43_RS01475	COG0583	DNA-binding transcription factor activity
DEJ43_RS01485	COG1063	alcohol dehydrogenase
DEJ43_RS01495	COG0515	serine threonine protein kinase
DEJ43_RS01515	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS01525	COG2375	cellular response to nickel ion
DEJ43_RS01525	COG1132	(ABC) transporter
DEJ43_RS01545	COG1796	DNA polymerase
DEJ43_RS01545	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
DEJ43_RS01575	COG1716	ATPase activity
DEJ43_RS01575	COG1131	(ABC) transporter
DEJ43_RS01575	COG0842	Transport permease protein
DEJ43_RS01600	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DEJ43_RS01610	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS01645	COG0517	IMP dehydrogenase activity
DEJ43_RS01645	COG0516	GMP reductase activity
DEJ43_RS01655	COG0583	DNA-binding transcription factor activity
DEJ43_RS01695	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DEJ43_RS01735	COG0069	glutamate synthase activity
DEJ43_RS01740	COG1191	sigma factor activity
DEJ43_RS01785	COG0784	Response regulator, receiver
DEJ43_RS01785	COG5002	protein histidine kinase activity
DEJ43_RS01785	COG2205	protein histidine kinase activity
DEJ43_RS01795	COG2208	phosphoserine phosphatase activity
DEJ43_RS01795	COG2770	Histidine kinase
DEJ43_RS01805	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DEJ43_RS01875	COG0288	reversible hydration of carbon dioxide
DEJ43_RS01890	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
DEJ43_RS01895	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
DEJ43_RS01915	COG1595	DNA-templated transcription, initiation
DEJ43_RS01930	COG2376	Dihydroxyacetone kinase
DEJ43_RS01935	COG1461	Dihydroxyacetone kinase
DEJ43_RS01945	COG0310	cobalt ion transport
DEJ43_RS01950	COG1930	Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import
DEJ43_RS01960	COG1122	ATPase activity
DEJ43_RS01965	COG0446	pyridine nucleotide-disulphide oxidoreductase
DEJ43_RS01965	COG1902	pentaerythritol trinitrate reductase activity
DEJ43_RS02040	COG1686	Belongs to the peptidase S11 family
DEJ43_RS02050	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DEJ43_RS02085	COG2340	Cysteine-rich secretory protein family
DEJ43_RS02100	COG2838	Isocitrate dehydrogenase
DEJ43_RS02115	COG3387	PFAM Glycoside hydrolase 15-related
DEJ43_RS02135	COG0438	transferase activity, transferring glycosyl groups
DEJ43_RS02145	COG0438	transferase activity, transferring glycosyl groups
DEJ43_RS02205	COG3903	Transcriptional regulator
DEJ43_RS02205	COG3629	intracellular signal transduction
DEJ43_RS02215	COG3739	integral membrane protein
DEJ43_RS02220	COG1278	Cold shock
DEJ43_RS02225	COG0513	Belongs to the DEAD box helicase family
DEJ43_RS02230	COG1132	(ABC) transporter
DEJ43_RS02240	COG1136	(ABC) transporter
DEJ43_RS02240	COG0577	efflux transmembrane transporter activity
DEJ43_RS02260	COG0745	RESPONSE REGULATOR receiver
DEJ43_RS02265	COG2205	protein histidine kinase activity
DEJ43_RS02290	COG1191	sigma factor activity
DEJ43_RS02315	COG0154	amidase activity
DEJ43_RS02320	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DEJ43_RS02330	COG1024	Enoyl-CoA hydratase
DEJ43_RS02340	COG3321	synthase
DEJ43_RS02340	COG3321	synthase
DEJ43_RS02340	COG0604	alcohol dehydrogenase
DEJ43_RS02340	COG0604	alcohol dehydrogenase
DEJ43_RS02350	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DEJ43_RS02365	COG3433	isochorismatase activity
DEJ43_RS02365	COG1535	isochorismatase
DEJ43_RS02385	COG1024	Enoyl-CoA hydratase
DEJ43_RS02390	COG1024	Enoyl-CoA hydratase
DEJ43_RS02430	COG0475	glutathione-regulated potassium exporter activity
DEJ43_RS02435	COG3629	intracellular signal transduction
DEJ43_RS02435	COG3903	Transcriptional regulator
DEJ43_RS02460	COG1021	2,3-dihydroxybenzoate-AMP ligase
DEJ43_RS02470	COG2226	methyltransferase
DEJ43_RS02470	COG3433	isochorismatase activity
DEJ43_RS02470	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DEJ43_RS02475	COG1132	(ABC) transporter
DEJ43_RS02480	COG2375	cellular response to nickel ion
DEJ43_RS02480	COG1132	(ABC) transporter
DEJ43_RS02495	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DEJ43_RS02495	COG3433	isochorismatase activity
DEJ43_RS02495	COG2226	methyltransferase
DEJ43_RS02510	COG0659	secondary active sulfate transmembrane transporter activity
DEJ43_RS02525	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
DEJ43_RS02530	COG3387	PFAM Glycoside hydrolase 15-related
DEJ43_RS02535	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DEJ43_RS02540	COG0477	Major facilitator Superfamily
DEJ43_RS02560	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
DEJ43_RS02570	COG1404	Belongs to the peptidase S8 family
DEJ43_RS02620	COG1505	serine-type exopeptidase activity
DEJ43_RS02665	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DEJ43_RS02710	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS02735	COG2310	stress, protein
DEJ43_RS02770	COG3469	chitinase activity
DEJ43_RS02795	COG3852	Histidine kinase
DEJ43_RS02805	COG2755	lipolytic protein G-D-S-L family
DEJ43_RS02810	COG1428	Deoxynucleoside kinase
DEJ43_RS02915	COG0243	molybdopterin cofactor binding
DEJ43_RS02925	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
DEJ43_RS02925	COG1796	DNA polymerase
DEJ43_RS02980	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
DEJ43_RS02985	COG3119	arylsulfatase activity
DEJ43_RS02990	COG0515	serine threonine protein kinase
DEJ43_RS03010	COG2182	Extracellular solute-binding protein
DEJ43_RS03015	COG1175	transmembrane transport
DEJ43_RS03020	COG0395	ABC-type sugar transport system, permease component
DEJ43_RS03025	COG2723	6-phospho-beta-galactosidase activity
DEJ43_RS03055	COG2124	cytochrome p450
DEJ43_RS03080	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
DEJ43_RS03085	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
DEJ43_RS03110	COG1295	ribonuclease BN
DEJ43_RS03110	COG1959	2 iron, 2 sulfur cluster binding
DEJ43_RS03115	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
DEJ43_RS03120	COG1533	DNA photolyase activity
DEJ43_RS03150	COG1982	Orn Lys Arg decarboxylase major
DEJ43_RS03160	COG0367	asparagine synthase
DEJ43_RS03165	COG2308	Evidence 4 Homologs of previously reported genes of
DEJ43_RS03165	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
DEJ43_RS03185	COG4221	oxidoreductase activity
DEJ43_RS03190	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS03270	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS03290	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
DEJ43_RS03295	COG0463	Glycosyl transferase, family 2
DEJ43_RS03315	COG0464	growth
DEJ43_RS03325	COG1349	DNA-binding transcription factor activity
DEJ43_RS03340	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DEJ43_RS03355	COG0577	efflux transmembrane transporter activity
DEJ43_RS03360	COG1136	(ABC) transporter
DEJ43_RS03380	COG2226	methyltransferase
DEJ43_RS03390	COG1940	carbohydrate kinase activity
DEJ43_RS03400	COG2223	nitrite transmembrane transporter activity
DEJ43_RS03415	COG2197	response regulator
DEJ43_RS03420	COG4585	Histidine kinase
DEJ43_RS03455	COG3409	Peptidoglycan-binding domain 1 protein
DEJ43_RS03475	COG1660	Displays ATPase and GTPase activities
DEJ43_RS03500	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
DEJ43_RS03560	COG0671	phosphoesterase, PA-phosphatase related
DEJ43_RS03580	COG0640	Transcriptional regulator
DEJ43_RS03585	COG1902	pentaerythritol trinitrate reductase activity
DEJ43_RS03595	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
DEJ43_RS03610	COG2706	6-phosphogluconolactonase activity
DEJ43_RS03625	COG4941	Belongs to the sigma-70 factor family
DEJ43_RS03630	COG3795	YCII-related domain
DEJ43_RS03635	COG0723	plastoquinol--plastocyanin reductase activity
DEJ43_RS03645	COG3585	molybdate ion transport
DEJ43_RS03665	COG4566	intracellular signal transduction
DEJ43_RS03715	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DEJ43_RS03735	COG2311	Membrane
DEJ43_RS03745	COG0006	proline dipeptidase activity
DEJ43_RS03755	COG1505	serine-type exopeptidase activity
DEJ43_RS03760	COG4044	May play a role in the intracellular transport of hydrophobic ligands
DEJ43_RS03775	COG1120	ATPase activity
DEJ43_RS03780	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DEJ43_RS03785	COG1116	anion transmembrane transporter activity
DEJ43_RS03790	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DEJ43_RS03795	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DEJ43_RS03800	COG2072	flavoprotein involved in K transport
DEJ43_RS03810	COG1132	(ABC) transporter
DEJ43_RS03835	COG1132	(ABC) transporter
DEJ43_RS03840	COG1132	(ABC) transporter
DEJ43_RS03855	COG1946	Acyl-CoA thioesterase
DEJ43_RS03870	COG0386	Belongs to the glutathione peroxidase family
DEJ43_RS03875	COG2890	protein-(glutamine-N5) methyltransferase activity
DEJ43_RS03935	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
DEJ43_RS03970	COG2124	cytochrome p450
DEJ43_RS03980	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS03990	COG0242	peptide deformylase activity
DEJ43_RS04000	COG3442	glutamine amidotransferase
DEJ43_RS04005	COG0205	6-phosphofructokinase activity
DEJ43_RS04025	COG0204	Acyl-transferase
DEJ43_RS04040	COG0829	nickel cation binding
DEJ43_RS04045	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
DEJ43_RS04050	COG0830	nickel cation binding
DEJ43_RS04055	COG0804	urea catabolic process
DEJ43_RS04060	COG0832	Belongs to the urease beta subunit family
DEJ43_RS04065	COG0831	urea catabolic process
DEJ43_RS04070	COG1309	transcriptional regulator
DEJ43_RS04085	COG0740	serine-type endopeptidase activity
DEJ43_RS04110	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
DEJ43_RS04115	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DEJ43_RS04120	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
DEJ43_RS04130	COG2226	methyltransferase
DEJ43_RS04155	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DEJ43_RS04160	COG3663	DNA glycosylase
DEJ43_RS04170	COG1940	carbohydrate kinase activity
DEJ43_RS04175	COG2188	Transcriptional regulator
DEJ43_RS04180	COG1595	DNA-templated transcription, initiation
DEJ43_RS04195	COG4977	sequence-specific DNA binding
DEJ43_RS04235	COG0626	cystathionine gamma-synthase activity
DEJ43_RS04240	COG1522	sequence-specific DNA binding
DEJ43_RS04250	COG1522	sequence-specific DNA binding
DEJ43_RS04255	COG0419	ATPase involved in DNA repair
DEJ43_RS04260	COG0420	3'-5' exonuclease activity
DEJ43_RS04265	COG1739	Uncharacterized protein family UPF0029
DEJ43_RS04275	COG0318	PFAM AMP-dependent synthetase and ligase
DEJ43_RS04285	COG1832	CoA-binding protein
DEJ43_RS04305	COG0110	maltose O-acetyltransferase activity
DEJ43_RS04350	COG0183	Belongs to the thiolase family
DEJ43_RS04360	COG1968	undecaprenyl-diphosphatase activity
DEJ43_RS04365	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DEJ43_RS04375	COG0815	Transfers the fatty acyl group on membrane lipoproteins
DEJ43_RS04395	COG2318	DinB family
DEJ43_RS04410	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
DEJ43_RS04465	COG0475	glutathione-regulated potassium exporter activity
DEJ43_RS04475	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
DEJ43_RS04480	COG1605	Chorismate mutase
DEJ43_RS04485	COG0287	Prephenate dehydrogenase
DEJ43_RS04490	COG0512	Glutamine amidotransferase of anthranilate synthase
DEJ43_RS04490	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DEJ43_RS04495	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
DEJ43_RS04500	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DEJ43_RS04535	COG0667	Aldo Keto reductase
DEJ43_RS04665	COG1695	Transcriptional regulator
DEJ43_RS04700	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
DEJ43_RS04700	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
DEJ43_RS04710	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DEJ43_RS04730	COG1716	ATPase activity
DEJ43_RS04750	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
DEJ43_RS04780	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DEJ43_RS04795	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DEJ43_RS04815	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DEJ43_RS04830	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
DEJ43_RS04840	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DEJ43_RS04855	COG2018	Roadblock/LC7 domain
DEJ43_RS04895	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
DEJ43_RS04900	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
DEJ43_RS04905	COG1984	allophanate hydrolase subunit 2
DEJ43_RS04920	COG0438	transferase activity, transferring glycosyl groups
DEJ43_RS04955	COG2364	Membrane
DEJ43_RS04965	COG2270	Major facilitator Superfamily
DEJ43_RS04980	COG1216	Glycosyl transferase, family 2
DEJ43_RS05015	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS05055	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
DEJ43_RS05055	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
DEJ43_RS05080	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
DEJ43_RS05085	COG0140	phosphoribosyl-ATP diphosphatase activity
DEJ43_RS05090	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
DEJ43_RS05095	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
DEJ43_RS05095	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
DEJ43_RS05100	COG3201	nicotinamide mononucleotide transporter
DEJ43_RS05135	COG1940	carbohydrate kinase activity
DEJ43_RS05135	COG1846	Transcriptional regulator
DEJ43_RS05140	COG0738	Major facilitator superfamily
DEJ43_RS05145	COG2233	PERMEase
DEJ43_RS05160	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DEJ43_RS05175	COG0531	amino acid
DEJ43_RS05190	COG2732	(Barnase) inhibitor
DEJ43_RS05200	COG2390	Transcriptional regulator
DEJ43_RS05205	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DEJ43_RS05245	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DEJ43_RS05280	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
DEJ43_RS05305	COG0284	orotidine-5'-phosphate decarboxylase activity
DEJ43_RS05310	COG0167	dihydroorotate dehydrogenase activity
DEJ43_RS05315	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
DEJ43_RS05320	COG0505	Belongs to the CarA family
DEJ43_RS05330	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
DEJ43_RS05335	COG0540	Belongs to the ATCase OTCase family
DEJ43_RS05340	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
DEJ43_RS05350	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DEJ43_RS05355	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DEJ43_RS05360	COG0006	proline dipeptidase activity
DEJ43_RS05370	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
DEJ43_RS05375	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
DEJ43_RS05380	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
DEJ43_RS05385	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
DEJ43_RS05390	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
DEJ43_RS05395	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DEJ43_RS05405	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DEJ43_RS05410	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DEJ43_RS05430	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
DEJ43_RS05445	COG0124	histidyl-tRNA synthetase
DEJ43_RS05455	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DEJ43_RS05460	COG1196	nuclear chromosome segregation
DEJ43_RS05465	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DEJ43_RS05470	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DEJ43_RS05475	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DEJ43_RS05480	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DEJ43_RS05490	COG2255	four-way junction helicase activity
DEJ43_RS05495	COG0632	four-way junction helicase activity
DEJ43_RS05500	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
DEJ43_RS05505	COG0217	transcriptional regulatory protein
DEJ43_RS05510	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
DEJ43_RS05515	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
DEJ43_RS05525	COG0438	transferase activity, transferring glycosyl groups
DEJ43_RS05535	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DEJ43_RS05560	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DEJ43_RS05575	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DEJ43_RS05625	COG0454	-acetyltransferase
DEJ43_RS05625	COG0456	acetyltransferase
DEJ43_RS05635	COG0512	Glutamine amidotransferase of anthranilate synthase
DEJ43_RS05635	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DEJ43_RS05685	COG1648	precorrin-2 dehydrogenase activity
DEJ43_RS05685	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
DEJ43_RS05690	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
DEJ43_RS05705	COG1464	Belongs to the NlpA lipoprotein family
DEJ43_RS05710	COG2011	ABC-type metal ion transport system permease component
DEJ43_RS05715	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DEJ43_RS05740	COG0584	glycerophosphoryl diester phosphodiesterase
DEJ43_RS05745	COG0204	Acyl-transferase
DEJ43_RS05745	COG0318	PFAM AMP-dependent synthetase and ligase
DEJ43_RS05750	COG0477	Major facilitator Superfamily
DEJ43_RS05765	COG0165	Argininosuccinate lyase
DEJ43_RS05775	COG1438	arginine binding
DEJ43_RS05780	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DEJ43_RS05785	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
DEJ43_RS05790	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
DEJ43_RS05795	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
DEJ43_RS05800	COG0137	argininosuccinate synthase activity
DEJ43_RS05815	COG2813	Specifically methylates the guanine in position
DEJ43_RS05835	COG0697	spore germination
DEJ43_RS05845	COG1649	PFAM Uncharacterised BCR, COG1649
DEJ43_RS05855	COG1051	belongs to the nudix hydrolase family
DEJ43_RS05875	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DEJ43_RS05875	COG0072	phenylalanine-tRNA ligase activity
DEJ43_RS05880	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
DEJ43_RS05885	COG5002	protein histidine kinase activity
DEJ43_RS05890	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DEJ43_RS05895	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
DEJ43_RS05900	COG0291	Belongs to the bacterial ribosomal protein bL35 family
DEJ43_RS05905	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
DEJ43_RS05950	COG1012	belongs to the aldehyde dehydrogenase family
DEJ43_RS05955	COG0174	glutamine synthetase
DEJ43_RS05965	COG1113	amino acid transport
DEJ43_RS05970	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
DEJ43_RS06015	COG0517	IMP dehydrogenase activity
DEJ43_RS06015	COG4175	Glycine betaine
DEJ43_RS06020	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DEJ43_RS06040	COG2124	cytochrome p450
DEJ43_RS06050	COG0805	protein transport
DEJ43_RS06055	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
DEJ43_RS06090	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
DEJ43_RS06100	COG1609	Transcriptional regulator
DEJ43_RS06105	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
DEJ43_RS06110	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
DEJ43_RS06120	COG4122	O-methyltransferase activity
DEJ43_RS06125	COG1222	aaa ATPase
DEJ43_RS06145	COG1994	Peptidase M50
DEJ43_RS06145	COG0517	IMP dehydrogenase activity
DEJ43_RS06155	COG2197	response regulator
DEJ43_RS06165	COG0747	negative chemotaxis
DEJ43_RS06175	COG1410	methionine synthase
DEJ43_RS06175	COG0646	methionine synthase
DEJ43_RS06180	COG1414	Transcriptional regulator
DEJ43_RS06185	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DEJ43_RS06190	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
DEJ43_RS06195	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
DEJ43_RS06200	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DEJ43_RS06215	COG0215	cysteine-tRNA ligase activity
DEJ43_RS06235	COG0598	Magnesium transport protein CorA
DEJ43_RS06245	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DEJ43_RS06250	COG0667	Aldo Keto reductase
DEJ43_RS06280	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DEJ43_RS06305	COG1113	amino acid transport
DEJ43_RS06310	COG2186	Transcriptional regulator
DEJ43_RS06315	COG3265	gluconokinase activity
DEJ43_RS06355	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
DEJ43_RS06360	COG2149	membrane
DEJ43_RS06380	COG4948	Mandelate Racemase Muconate Lactonizing
DEJ43_RS06390	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS06400	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS06405	COG3876	Protein conserved in bacteria
DEJ43_RS06430	COG0789	Transcriptional regulator
DEJ43_RS06450	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS06460	COG0640	Transcriptional regulator
DEJ43_RS06505	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DEJ43_RS06550	COG2851	Citrate transporter
DEJ43_RS06555	COG0243	molybdopterin cofactor binding
DEJ43_RS06560	COG1309	transcriptional regulator
DEJ43_RS06580	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
DEJ43_RS06585	COG2188	Transcriptional regulator
DEJ43_RS06610	COG1804	L-carnitine dehydratase bile acid-inducible protein F
DEJ43_RS06625	COG2755	lipolytic protein G-D-S-L family
DEJ43_RS06640	COG0726	polysaccharide deacetylase
DEJ43_RS06650	COG1725	Transcriptional regulator
DEJ43_RS06655	COG0456	acetyltransferase
DEJ43_RS06685	COG4565	transcriptional regulatory protein
DEJ43_RS06700	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DEJ43_RS06705	COG0587	DNA-directed DNA polymerase activity
DEJ43_RS06720	COG1012	belongs to the aldehyde dehydrogenase family
DEJ43_RS06720	COG1454	alcohol dehydrogenase
DEJ43_RS06735	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DEJ43_RS06740	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DEJ43_RS06745	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DEJ43_RS06750	COG1126	abc transporter atp-binding protein
DEJ43_RS06765	COG0765	amino acid transport
DEJ43_RS06785	COG1799	cell septum assembly
DEJ43_RS06790	COG0477	Major facilitator Superfamily
DEJ43_RS06805	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
DEJ43_RS06815	COG0438	transferase activity, transferring glycosyl groups
DEJ43_RS06835	COG0411	ABC transporter
DEJ43_RS06845	COG3583	domain protein
DEJ43_RS06860	COG1160	GTP binding
DEJ43_RS06870	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
DEJ43_RS06900	COG3541	Predicted nucleotidyltransferase
DEJ43_RS06905	COG3541	Predicted nucleotidyltransferase
DEJ43_RS06930	COG1187	pseudouridine synthase activity
DEJ43_RS06935	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
DEJ43_RS06940	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
DEJ43_RS06955	COG0686	Belongs to the AlaDH PNT family
DEJ43_RS06965	COG0494	nUDIX hydrolase
DEJ43_RS06970	COG0504	CTP synthase activity
DEJ43_RS06975	COG3387	PFAM Glycoside hydrolase 15-related
DEJ43_RS07010	COG0497	DNA recombination
DEJ43_RS07015	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DEJ43_RS07035	COG1120	ATPase activity
DEJ43_RS07040	COG0647	UMP catabolic process
DEJ43_RS07075	COG2094	Belongs to the DNA glycosylase MPG family
DEJ43_RS07085	COG1881	PFAM PEBP family protein
DEJ43_RS07110	COG1119	ATPase activity
DEJ43_RS07125	COG2197	response regulator
DEJ43_RS07130	COG4585	Histidine kinase
DEJ43_RS07140	COG1716	ATPase activity
DEJ43_RS07140	COG1131	(ABC) transporter
DEJ43_RS07140	COG0842	Transport permease protein
DEJ43_RS07145	COG3830	Belongs to the UPF0237 family
DEJ43_RS07145	COG0560	Phosphoserine phosphatase
DEJ43_RS07165	COG2186	Transcriptional regulator
DEJ43_RS07180	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS07210	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DEJ43_RS07230	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
DEJ43_RS07235	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DEJ43_RS07250	COG1804	L-carnitine dehydratase bile acid-inducible protein F
DEJ43_RS07300	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
DEJ43_RS07315	COG3387	PFAM Glycoside hydrolase 15-related
DEJ43_RS07355	COG1024	Enoyl-CoA hydratase
DEJ43_RS07365	COG0488	(ABC) transporter
DEJ43_RS07400	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
DEJ43_RS07405	COG1492	cobalamin metabolic process
DEJ43_RS07420	COG1797	cobyrinic acid a,c-diamide synthase activity
DEJ43_RS07440	COG1132	(ABC) transporter
DEJ43_RS07440	COG2375	cellular response to nickel ion
DEJ43_RS07460	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
DEJ43_RS07465	COG1902	pentaerythritol trinitrate reductase activity
DEJ43_RS07495	COG0477	Major facilitator Superfamily
DEJ43_RS07505	COG3321	synthase
DEJ43_RS07505	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS07505	COG0604	alcohol dehydrogenase
DEJ43_RS07530	COG4585	Histidine kinase
DEJ43_RS07535	COG2197	response regulator
DEJ43_RS07540	COG0768	penicillin binding
DEJ43_RS07560	COG3290	protein histidine kinase activity
DEJ43_RS07575	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DEJ43_RS07580	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DEJ43_RS07585	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS07610	COG1802	Transcriptional regulator
DEJ43_RS07645	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DEJ43_RS07655	COG2171	N-acyltransferase activity
DEJ43_RS07660	COG3226	Transcriptional regulator
DEJ43_RS07665	COG2076	Multidrug Resistance protein
DEJ43_RS07675	COG2151	metal-sulfur cluster biosynthetic enzyme
DEJ43_RS07680	COG0822	iron-sulfur transferase activity
DEJ43_RS07685	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DEJ43_RS07690	COG0396	ATPase activity
DEJ43_RS07700	COG0719	Fe-S assembly protein
DEJ43_RS07740	COG0109	protoheme IX farnesyltransferase activity
DEJ43_RS07750	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DEJ43_RS07765	COG0363	glucosamine-6-phosphate deaminase activity
DEJ43_RS07780	COG0166	Belongs to the GPI family
DEJ43_RS07795	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DEJ43_RS07800	COG0149	triose-phosphate isomerase activity
DEJ43_RS07805	COG0126	phosphoglycerate kinase activity
DEJ43_RS07810	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
DEJ43_RS07820	COG1481	regulation of sporulation
DEJ43_RS07825	COG0391	Required for morphogenesis under gluconeogenic growth conditions
DEJ43_RS07830	COG1660	Displays ATPase and GTPase activities
DEJ43_RS07835	COG0322	excinuclease ABC activity
DEJ43_RS07840	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS07865	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DEJ43_RS07880	COG0477	Major facilitator Superfamily
DEJ43_RS07910	COG0556	nucleotide-excision repair
DEJ43_RS07920	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DEJ43_RS07925	COG0477	Major facilitator Superfamily
DEJ43_RS07950	COG2313	pseudouridylate synthase activity
DEJ43_RS07955	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DEJ43_RS07980	COG1733	regulation of RNA biosynthetic process
DEJ43_RS08010	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DEJ43_RS08030	COG0237	dephospho-CoA kinase activity
DEJ43_RS08045	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DEJ43_RS08045	COG0596	Alpha beta hydrolase
DEJ43_RS08045	COG2226	methyltransferase
DEJ43_RS08050	COG1643	Atp-dependent helicase
DEJ43_RS08090	COG2050	protein possibly involved in aromatic compounds catabolism
DEJ43_RS08140	COG0737	Belongs to the 5'-nucleotidase family
DEJ43_RS08160	COG0252	asparaginase activity
DEJ43_RS08165	COG1605	Chorismate mutase
DEJ43_RS08165	COG0287	Prephenate dehydrogenase
DEJ43_RS08205	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS08215	COG1024	Enoyl-CoA hydratase
DEJ43_RS08245	COG0183	Belongs to the thiolase family
DEJ43_RS08250	COG1309	transcriptional regulator
DEJ43_RS08260	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS08265	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS08270	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS08275	COG3467	pyridoxamine 5'-phosphate
DEJ43_RS08290	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DEJ43_RS08300	COG0657	acetylesterase activity
DEJ43_RS08310	COG0069	glutamate synthase activity
DEJ43_RS08310	COG0070	glutamate synthase
DEJ43_RS08310	COG0067	glutamate synthase
DEJ43_RS08345	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DEJ43_RS08350	COG1804	L-carnitine dehydratase bile acid-inducible protein F
DEJ43_RS08360	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
DEJ43_RS08370	COG0159	tryptophan synthase activity
DEJ43_RS08375	COG0133	tryptophan synthase activity
DEJ43_RS08385	COG0134	indole-3-glycerol-phosphate synthase activity
DEJ43_RS08410	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
DEJ43_RS08430	COG0107	imidazoleglycerol-phosphate synthase activity
DEJ43_RS08435	COG0251	oxidation-reduction process
DEJ43_RS08440	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
DEJ43_RS08445	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
DEJ43_RS08450	COG0131	Imidazoleglycerol-phosphate dehydratase
DEJ43_RS08455	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DEJ43_RS08460	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
DEJ43_RS08480	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DEJ43_RS08500	COG1432	Conserved Protein
DEJ43_RS08505	COG0587	DNA-directed DNA polymerase activity
DEJ43_RS08555	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
DEJ43_RS08570	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DEJ43_RS08585	COG1799	cell septum assembly
DEJ43_RS08590	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DEJ43_RS08595	COG1496	oxidoreductase activity
DEJ43_RS08610	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
DEJ43_RS08615	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DEJ43_RS08625	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
DEJ43_RS08630	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DEJ43_RS08640	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DEJ43_RS08645	COG0768	penicillin binding
DEJ43_RS08655	COG0275	rRNA processing
DEJ43_RS08665	COG0714	Associated with various cellular activities
DEJ43_RS08685	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DEJ43_RS08695	COG1132	(ABC) transporter
DEJ43_RS08705	COG1309	transcriptional regulator
DEJ43_RS08730	COG0352	thiamine-phosphate diphosphorylase activity
DEJ43_RS08745	COG2022	thiamine diphosphate biosynthetic process
DEJ43_RS08745	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DEJ43_RS08755	COG2022	thiamine diphosphate biosynthetic process
DEJ43_RS08760	COG0515	serine threonine protein kinase
DEJ43_RS08760	COG2815	serine threonine protein kinase
DEJ43_RS08765	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
DEJ43_RS08775	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
DEJ43_RS08780	COG2193	ferroxidase activity
DEJ43_RS08785	COG0243	molybdopterin cofactor binding
DEJ43_RS08790	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
DEJ43_RS08810	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DEJ43_RS08815	COG2197	response regulator
DEJ43_RS08820	COG4585	Histidine kinase
DEJ43_RS08845	COG1940	carbohydrate kinase activity
DEJ43_RS08855	COG0003	Pfam Anion-transporting ATPase
DEJ43_RS08870	COG1022	Amp-dependent synthetase and ligase
DEJ43_RS08875	COG0438	transferase activity, transferring glycosyl groups
DEJ43_RS08885	COG0534	Mate efflux family protein
DEJ43_RS08920	COG0705	Rhomboid family
DEJ43_RS08930	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DEJ43_RS08935	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DEJ43_RS08940	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
DEJ43_RS08945	COG0723	plastoquinol--plastocyanin reductase activity
DEJ43_RS08950	COG2010	Cytochrome c
DEJ43_RS08955	COG1845	cytochrome c oxidase, subunit III
DEJ43_RS08965	COG1376	ErfK ybiS ycfS ynhG family protein
DEJ43_RS08975	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
DEJ43_RS08980	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
DEJ43_RS08985	COG1104	cysteine desulfurase activity
DEJ43_RS08990	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DEJ43_RS09010	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
DEJ43_RS09015	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DEJ43_RS09020	COG2197	response regulator
DEJ43_RS09025	COG4585	Histidine kinase
DEJ43_RS09045	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DEJ43_RS09050	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DEJ43_RS09065	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
DEJ43_RS09070	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
DEJ43_RS09070	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
DEJ43_RS09115	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
DEJ43_RS09120	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DEJ43_RS09125	COG0508	dehydrogenase complex catalyzes the overall conversion of
DEJ43_RS09135	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
DEJ43_RS09145	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS09155	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS09195	COG0321	lipoyl(octanoyl) transferase activity
DEJ43_RS09200	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
DEJ43_RS09255	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DEJ43_RS09280	COG0745	RESPONSE REGULATOR receiver
DEJ43_RS09305	COG2365	Tyrosine phosphatase family
DEJ43_RS09335	COG1309	transcriptional regulator
DEJ43_RS09365	COG0366	Alpha amylase catalytic
DEJ43_RS09370	COG3833	ABC-type maltose transport systems, permease component
DEJ43_RS09375	COG1175	transmembrane transport
DEJ43_RS09380	COG2182	Extracellular solute-binding protein
DEJ43_RS09385	COG1609	Transcriptional regulator
DEJ43_RS09400	COG0531	amino acid
DEJ43_RS09415	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
DEJ43_RS09440	COG0174	glutamine synthetase
DEJ43_RS09455	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DEJ43_RS09505	COG1674	ftsk spoiiie
DEJ43_RS09540	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
DEJ43_RS09545	COG0174	glutamine synthetase
DEJ43_RS09570	COG2267	carboxylic ester hydrolase activity
DEJ43_RS09580	COG0531	amino acid
DEJ43_RS09585	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DEJ43_RS09585	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
DEJ43_RS09590	COG2814	Major facilitator Superfamily
DEJ43_RS09605	COG0477	Major facilitator Superfamily
DEJ43_RS09610	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
DEJ43_RS09630	COG1994	Peptidase M50
DEJ43_RS09675	COG1120	ATPase activity
DEJ43_RS09680	COG2822	iron ion transport
DEJ43_RS09685	COG2837	iron assimilation
DEJ43_RS09690	COG0672	)-iron permease
DEJ43_RS09710	COG1834	amidinotransferase
DEJ43_RS09720	COG2814	Major facilitator Superfamily
DEJ43_RS09730	COG3540	Alkaline phosphatase
DEJ43_RS09735	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS09750	COG2197	response regulator
DEJ43_RS09755	COG4585	Histidine kinase
DEJ43_RS09785	COG1522	sequence-specific DNA binding
DEJ43_RS09850	COG3022	response to hydroperoxide
DEJ43_RS09855	COG0800	Aldolase
DEJ43_RS09875	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DEJ43_RS09880	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DEJ43_RS09900	COG2030	dehydratase
DEJ43_RS09905	COG1131	(ABC) transporter
DEJ43_RS09915	COG4585	Histidine kinase
DEJ43_RS09920	COG2197	response regulator
DEJ43_RS09935	COG0183	Belongs to the thiolase family
DEJ43_RS09940	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS09955	COG0515	serine threonine protein kinase
DEJ43_RS09955	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DEJ43_RS09985	COG1733	regulation of RNA biosynthetic process
DEJ43_RS10030	COG0860	N-Acetylmuramoyl-L-alanine amidase
DEJ43_RS10040	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DEJ43_RS10060	COG0438	transferase activity, transferring glycosyl groups
DEJ43_RS10065	COG1309	transcriptional regulator
DEJ43_RS10110	COG3845	ABC transporter
DEJ43_RS10125	COG0183	Belongs to the thiolase family
DEJ43_RS10130	COG2124	cytochrome p450
DEJ43_RS10140	COG4122	O-methyltransferase activity
DEJ43_RS10200	COG2188	Transcriptional regulator
DEJ43_RS10475	COG1660	Displays ATPase and GTPase activities
DEJ43_RS10565	COG2890	protein-(glutamine-N5) methyltransferase activity
DEJ43_RS10775	COG1358	cellular component organization or biogenesis
DEJ43_RS10835	COG0477	Major facilitator Superfamily
DEJ43_RS10855	COG4585	Histidine kinase
DEJ43_RS10860	COG2197	response regulator
DEJ43_RS10875	COG0667	Aldo Keto reductase
DEJ43_RS10880	COG0789	Transcriptional regulator
DEJ43_RS10895	COG2205	protein histidine kinase activity
DEJ43_RS10900	COG0745	RESPONSE REGULATOR receiver
DEJ43_RS10920	COG1741	Belongs to the pirin family
DEJ43_RS10935	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DEJ43_RS10940	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DEJ43_RS10945	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DEJ43_RS10965	COG1309	transcriptional regulator
DEJ43_RS10985	COG3293	Transposase
DEJ43_RS11005	COG5297	Belongs to the glycosyl hydrolase family 6
DEJ43_RS11015	COG1764	response to oxidative stress
DEJ43_RS11020	COG2130	NADP-dependent
DEJ43_RS11050	COG0318	PFAM AMP-dependent synthetase and ligase
DEJ43_RS11055	COG1404	Belongs to the peptidase S8 family
DEJ43_RS11060	COG0477	Major facilitator Superfamily
DEJ43_RS11080	COG2249	NAD(P)H dehydrogenase (quinone) activity
DEJ43_RS11085	COG0477	Major facilitator Superfamily
DEJ43_RS11100	COG1846	Transcriptional regulator
DEJ43_RS11105	COG1764	response to oxidative stress
DEJ43_RS11110	COG3511	phospholipase C
DEJ43_RS11165	COG1070	Carbohydrate kinase
DEJ43_RS11185	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DEJ43_RS11190	COG0358	DNA primase activity
DEJ43_RS11200	COG0232	Belongs to the dGTPase family. Type 2 subfamily
DEJ43_RS11215	COG2949	membrane
DEJ43_RS11285	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DEJ43_RS11290	COG2146	nitrite reductase [NAD(P)H] activity
DEJ43_RS11290	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DEJ43_RS11295	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DEJ43_RS11295	COG2146	nitrite reductase [NAD(P)H] activity
DEJ43_RS11300	COG1309	transcriptional regulator
DEJ43_RS11310	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS11335	COG0574	Belongs to the PEP-utilizing enzyme family
DEJ43_RS11335	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DEJ43_RS11355	COG0477	Major facilitator Superfamily
DEJ43_RS11360	COG0667	Aldo Keto reductase
DEJ43_RS11375	COG0423	glycine-tRNA ligase activity
DEJ43_RS11380	COG3443	Belongs to the bacterial solute-binding protein 9 family
DEJ43_RS11380	COG0803	Belongs to the bacterial solute-binding protein 9 family
DEJ43_RS11385	COG1121	(ABC) transporter
DEJ43_RS11390	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DEJ43_RS11400	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DEJ43_RS11405	COG1381	Involved in DNA repair and RecF pathway recombination
DEJ43_RS11430	COG0277	FAD linked oxidase domain protein
DEJ43_RS11445	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DEJ43_RS11460	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DEJ43_RS11495	COG2315	Protein conserved in bacteria
DEJ43_RS11505	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
DEJ43_RS11525	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
DEJ43_RS11530	COG1234	tRNA 3'-trailer cleavage
DEJ43_RS11535	COG0537	adenosine 5'-monophosphoramidase activity
DEJ43_RS11545	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DEJ43_RS11555	COG2070	2-Nitropropane dioxygenase
DEJ43_RS11560	COG0484	heat shock protein binding
DEJ43_RS11565	COG1420	regulation of RNA biosynthetic process
DEJ43_RS11595	COG0481	GTPase activity
DEJ43_RS11600	COG0268	Binds directly to 16S ribosomal RNA
DEJ43_RS11615	COG2353	YceI-like domain
DEJ43_RS11635	COG1234	tRNA 3'-trailer cleavage
DEJ43_RS11645	COG1307	EDD domain protein, DegV family
DEJ43_RS11655	COG0495	leucyl-tRNA aminoacylation
DEJ43_RS11675	COG0477	Major facilitator Superfamily
DEJ43_RS11690	COG0588	phosphoglycerate mutase activity
DEJ43_RS11695	COG0799	negative regulation of ribosome biogenesis
DEJ43_RS11705	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
DEJ43_RS11715	COG0501	Belongs to the peptidase M48B family
DEJ43_RS11730	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
DEJ43_RS11740	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
DEJ43_RS11750	COG0463	Glycosyl transferase, family 2
DEJ43_RS11770	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
DEJ43_RS11775	COG1216	Glycosyl transferase, family 2
DEJ43_RS11780	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DEJ43_RS11785	COG0211	Belongs to the bacterial ribosomal protein bL27 family
DEJ43_RS11790	COG0261	This protein binds to 23S rRNA in the presence of protein L20
DEJ43_RS11795	COG1530	ribonuclease E activity
DEJ43_RS11820	COG0772	Belongs to the SEDS family
DEJ43_RS11825	COG0768	penicillin binding
DEJ43_RS11840	COG1077	Cell shape determining protein MreB Mrl
DEJ43_RS11845	COG0105	UTP biosynthetic process
DEJ43_RS11855	COG0285	dihydrofolate synthase activity
DEJ43_RS11870	COG2205	protein histidine kinase activity
DEJ43_RS11875	COG0745	RESPONSE REGULATOR receiver
DEJ43_RS11890	COG0525	valine-tRNA ligase activity
DEJ43_RS11900	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
DEJ43_RS11905	COG0740	serine-type endopeptidase activity
DEJ43_RS11910	COG0740	serine-type endopeptidase activity
DEJ43_RS11915	COG0544	peptidyl-prolyl cis-trans isomerase activity
DEJ43_RS11940	COG4552	Acetyltransferase involved in intracellular survival and related
DEJ43_RS11955	COG1113	amino acid transport
DEJ43_RS11965	COG1113	amino acid transport
DEJ43_RS11970	COG1113	amino acid transport
DEJ43_RS11975	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DEJ43_RS11980	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
DEJ43_RS12045	COG4266	Belongs to the allantoicase family
DEJ43_RS12050	COG0583	DNA-binding transcription factor activity
DEJ43_RS12060	COG0697	spore germination
DEJ43_RS12065	COG1846	Transcriptional regulator
DEJ43_RS12085	COG3525	Glycosyl hydrolase, family 20, catalytic domain
DEJ43_RS12095	COG0668	transmembrane transport
DEJ43_RS12105	COG1653	transport
DEJ43_RS12110	COG1175	transmembrane transport
DEJ43_RS12115	COG0395	ABC-type sugar transport system, permease component
DEJ43_RS12120	COG1486	melibiose metabolic process
DEJ43_RS12135	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DEJ43_RS12165	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
DEJ43_RS12170	COG2346	COG2346, Truncated hemoglobins
DEJ43_RS12185	COG1136	(ABC) transporter
DEJ43_RS12185	COG0577	efflux transmembrane transporter activity
DEJ43_RS12250	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DEJ43_RS12395	COG0267	Belongs to the bacterial ribosomal protein bL33 family
DEJ43_RS12400	COG2045	Belongs to the ComB family
DEJ43_RS12430	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
DEJ43_RS12435	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
DEJ43_RS12440	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
DEJ43_RS12455	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DEJ43_RS12460	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DEJ43_RS12515	COG3962	Belongs to the TPP enzyme family
DEJ43_RS12520	COG3718	enzyme involved in inositol metabolism
DEJ43_RS12545	COG2409	Drug exporters of the RND superfamily
DEJ43_RS12555	COG0475	glutathione-regulated potassium exporter activity
DEJ43_RS12555	COG0569	domain protein
DEJ43_RS12575	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DEJ43_RS12600	COG0673	inositol 2-dehydrogenase activity
DEJ43_RS12605	COG1609	Transcriptional regulator
DEJ43_RS12635	COG1472	Belongs to the glycosyl hydrolase 3 family
DEJ43_RS12660	COG0028	Belongs to the TPP enzyme family
DEJ43_RS12670	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DEJ43_RS12695	COG1946	Acyl-CoA thioesterase
DEJ43_RS12710	COG1309	transcriptional regulator
DEJ43_RS12715	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
DEJ43_RS12730	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS12740	COG0076	glutamate decarboxylase activity
DEJ43_RS12745	COG3486	L-lysine 6-monooxygenase (NADPH) activity
DEJ43_RS12770	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DEJ43_RS12780	COG0589	response to stress
DEJ43_RS12795	COG4977	sequence-specific DNA binding
DEJ43_RS12800	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
DEJ43_RS12820	COG1175	transmembrane transport
DEJ43_RS12830	COG2985	domain, Protein
DEJ43_RS12835	COG2985	domain, Protein
DEJ43_RS12845	COG3469	chitinase activity
DEJ43_RS12855	COG0745	RESPONSE REGULATOR receiver
DEJ43_RS12880	COG0406	alpha-ribazole phosphatase activity
DEJ43_RS12935	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DEJ43_RS12955	COG4585	Histidine kinase
DEJ43_RS12960	COG0318	PFAM AMP-dependent synthetase and ligase
DEJ43_RS12965	COG3397	chitin binding
DEJ43_RS13035	COG2188	Transcriptional regulator
DEJ43_RS13045	COG1940	carbohydrate kinase activity
DEJ43_RS13050	COG0673	inositol 2-dehydrogenase activity
DEJ43_RS13055	COG4702	Belongs to the UPF0303 family
DEJ43_RS13065	COG0179	Fumarylacetoacetate (FAA) hydrolase
DEJ43_RS13070	COG0706	membrane insertase activity
DEJ43_RS13090	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DEJ43_RS13095	COG3764	Sortase (surface protein transpeptidase)
DEJ43_RS13115	COG2733	membrane
DEJ43_RS13120	COG4555	ABC transporter
DEJ43_RS13135	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DEJ43_RS13180	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
DEJ43_RS13190	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
DEJ43_RS13195	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DEJ43_RS13200	COG1263	PTS System
DEJ43_RS13205	COG1263	PTS System
DEJ43_RS13210	COG1234	tRNA 3'-trailer cleavage
DEJ43_RS13230	COG1120	ATPase activity
DEJ43_RS13235	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DEJ43_RS13260	COG1113	amino acid transport
DEJ43_RS13270	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
DEJ43_RS13280	COG1335	isochorismatase
DEJ43_RS13315	COG0277	FAD linked oxidase domain protein
DEJ43_RS13325	COG3185	4-Hydroxyphenylpyruvate dioxygenase
DEJ43_RS13365	COG3654	unkown
DEJ43_RS13450	COG1529	Aldehyde oxidase and xanthine dehydrogenase
DEJ43_RS13465	COG3525	Glycosyl hydrolase, family 20, catalytic domain
DEJ43_RS13470	COG0395	ABC-type sugar transport system, permease component
DEJ43_RS13490	COG1678	Uncharacterized ACR, COG1678
DEJ43_RS13495	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DEJ43_RS13500	COG0776	regulation of translation
DEJ43_RS13510	COG3973	AAA domain
DEJ43_RS13520	COG2223	nitrite transmembrane transporter activity
DEJ43_RS13525	COG0583	DNA-binding transcription factor activity
DEJ43_RS13540	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
DEJ43_RS13545	COG0793	Belongs to the peptidase S41A family
DEJ43_RS13550	COG2177	Part of the ABC transporter FtsEX involved in
DEJ43_RS13555	COG2884	Cell division ATP-binding protein ftsE
DEJ43_RS13570	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DEJ43_RS13575	COG0515	serine threonine protein kinase
DEJ43_RS13580	COG0515	serine threonine protein kinase
DEJ43_RS13590	COG1653	transport
DEJ43_RS13595	COG1175	transmembrane transport
DEJ43_RS13600	COG0395	ABC-type sugar transport system, permease component
DEJ43_RS13605	COG1309	transcriptional regulator
DEJ43_RS13635	COG2902	Dehydrogenase
DEJ43_RS13665	COG0653	protein targeting
DEJ43_RS13675	COG3214	Protein conserved in bacteria
DEJ43_RS13680	COG2197	response regulator
DEJ43_RS13685	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DEJ43_RS13695	COG0823	Involved in the tonB-independent uptake of proteins
DEJ43_RS13700	COG5002	protein histidine kinase activity
DEJ43_RS13700	COG5000	phosphorelay sensor kinase activity
DEJ43_RS13705	COG0745	RESPONSE REGULATOR receiver
DEJ43_RS13725	COG0714	Associated with various cellular activities
DEJ43_RS13775	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
DEJ43_RS13795	COG2835	tetraacyldisaccharide 4'-kinase activity
DEJ43_RS13800	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DEJ43_RS13835	COG0391	Required for morphogenesis under gluconeogenic growth conditions
DEJ43_RS13840	COG0778	Nitroreductase
DEJ43_RS13840	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
DEJ43_RS13875	COG1316	TRANSCRIPTIONal
DEJ43_RS13890	COG1316	TRANSCRIPTIONal
DEJ43_RS13900	COG1316	TRANSCRIPTIONal
DEJ43_RS13910	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
DEJ43_RS13940	COG2205	protein histidine kinase activity
DEJ43_RS13945	COG0745	RESPONSE REGULATOR receiver
DEJ43_RS13950	COG3104	oligopeptide transport
DEJ43_RS13985	COG1191	sigma factor activity
DEJ43_RS13990	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
DEJ43_RS14000	COG0683	leucine binding
DEJ43_RS14040	COG1228	amidohydrolase
DEJ43_RS14050	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DEJ43_RS14055	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
DEJ43_RS14090	COG1737	Transcriptional regulator
DEJ43_RS14105	COG2755	lipolytic protein G-D-S-L family
DEJ43_RS14110	COG0183	Belongs to the thiolase family
DEJ43_RS14385	COG0582	viral genome integration into host DNA
DEJ43_RS14395	COG1136	(ABC) transporter
DEJ43_RS14400	COG0577	efflux transmembrane transporter activity
DEJ43_RS14400	COG1136	(ABC) transporter
DEJ43_RS14405	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
DEJ43_RS14410	COG1252	NADH dehydrogenase
DEJ43_RS14430	COG0148	phosphopyruvate hydratase activity
DEJ43_RS14445	COG2124	cytochrome p450
DEJ43_RS14480	COG2207	Transcriptional regulator
DEJ43_RS14510	COG1595	DNA-templated transcription, initiation
DEJ43_RS14585	COG0577	efflux transmembrane transporter activity
DEJ43_RS14590	COG1136	(ABC) transporter
DEJ43_RS14600	COG0477	Major facilitator Superfamily
DEJ43_RS14610	COG0789	Transcriptional regulator
DEJ43_RS14655	COG4585	Histidine kinase
DEJ43_RS14670	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
DEJ43_RS14675	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DEJ43_RS14680	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
DEJ43_RS14685	COG0193	aminoacyl-tRNA hydrolase activity
DEJ43_RS14700	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
DEJ43_RS14710	COG1309	transcriptional regulator
DEJ43_RS14720	COG4106	trans-aconitate 2-methyltransferase activity
DEJ43_RS14725	COG1846	Transcriptional regulator
DEJ43_RS14730	COG2197	response regulator
DEJ43_RS14735	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
DEJ43_RS14765	COG0488	(ABC) transporter
DEJ43_RS14785	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
DEJ43_RS14790	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
DEJ43_RS14795	COG3583	domain protein
DEJ43_RS14795	COG3584	3D domain protein
DEJ43_RS14800	COG0084	hydrolase, TatD family'
DEJ43_RS14865	COG0442	prolyl-tRNA aminoacylation
DEJ43_RS14890	COG1280	lysine exporter protein (LysE YggA)
DEJ43_RS14910	COG1122	ATPase activity
DEJ43_RS14920	COG0310	cobalt ion transport
DEJ43_RS14930	COG2409	Drug exporters of the RND superfamily
DEJ43_RS14940	COG4946	Tricorn protease homolog
DEJ43_RS14940	COG0793	Belongs to the peptidase S41A family
DEJ43_RS14960	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS14965	COG2267	carboxylic ester hydrolase activity
DEJ43_RS14970	COG2072	flavoprotein involved in K transport
DEJ43_RS14985	COG2154	pterin-4-alpha-carbinolamine dehydratase
DEJ43_RS15060	COG0315	cyclic pyranopterin monophosphate synthase activity
DEJ43_RS15070	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DEJ43_RS15075	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DEJ43_RS15085	COG3263	regulation of cellular component size
DEJ43_RS15100	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
DEJ43_RS15110	COG1970	mechanosensitive ion channel activity
DEJ43_RS15130	COG0437	4 iron, 4 sulfur cluster binding
DEJ43_RS15135	COG0243	molybdopterin cofactor binding
DEJ43_RS15145	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DEJ43_RS15155	COG2223	nitrite transmembrane transporter activity
DEJ43_RS15160	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DEJ43_RS15160	COG2146	nitrite reductase [NAD(P)H] activity
DEJ43_RS15175	COG3191	aminopeptidase activity
DEJ43_RS15205	COG1349	DNA-binding transcription factor activity
DEJ43_RS15210	COG0477	Major facilitator Superfamily
DEJ43_RS15230	COG3384	dioxygenase
DEJ43_RS15235	COG1846	Transcriptional regulator
DEJ43_RS15270	COG3409	Peptidoglycan-binding domain 1 protein
DEJ43_RS15315	COG1686	Belongs to the peptidase S11 family
DEJ43_RS15355	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
DEJ43_RS15425	COG0318	PFAM AMP-dependent synthetase and ligase
DEJ43_RS15440	COG1024	Enoyl-CoA hydratase
DEJ43_RS15465	COG1309	transcriptional regulator
DEJ43_RS15475	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS15480	COG0183	Belongs to the thiolase family
DEJ43_RS15500	COG1309	transcriptional regulator
DEJ43_RS15550	COG2207	Transcriptional regulator
DEJ43_RS15550	COG3708	Transcriptional regulator
DEJ43_RS15555	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
DEJ43_RS15565	COG0163	prenyltransferase activity
DEJ43_RS15575	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
DEJ43_RS15585	COG0583	DNA-binding transcription factor activity
DEJ43_RS15595	COG0583	DNA-binding transcription factor activity
DEJ43_RS15600	COG1902	pentaerythritol trinitrate reductase activity
DEJ43_RS15630	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DEJ43_RS15635	COG1333	cytochrome c biogenesis protein
DEJ43_RS15640	COG0785	Cytochrome C biogenesis protein
DEJ43_RS15655	COG0406	alpha-ribazole phosphatase activity
DEJ43_RS15660	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
DEJ43_RS15670	COG0531	amino acid
DEJ43_RS15675	COG0789	Transcriptional regulator
DEJ43_RS15720	COG1846	Transcriptional regulator
DEJ43_RS15730	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DEJ43_RS15740	COG1742	UPF0060 membrane protein
DEJ43_RS15750	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DEJ43_RS15775	COG1690	Belongs to the RtcB family
DEJ43_RS15790	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
DEJ43_RS15795	COG0018	arginyl-trna synthetase
DEJ43_RS15805	COG0113	porphobilinogen synthase activity
DEJ43_RS15810	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
DEJ43_RS15810	COG1648	precorrin-2 dehydrogenase activity
DEJ43_RS15815	COG0181	hydroxymethylbilane synthase activity
DEJ43_RS15820	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
DEJ43_RS15825	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
DEJ43_RS15875	COG0123	including yeast histone deacetylase and acetoin utilization protein
DEJ43_RS15880	COG2223	nitrite transmembrane transporter activity
DEJ43_RS15885	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DEJ43_RS15930	COG0180	Tryptophanyl-tRNA synthetase
DEJ43_RS15940	COG1335	isochorismatase
DEJ43_RS15945	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DEJ43_RS15955	COG0842	Transport permease protein
DEJ43_RS15955	COG1129	ABC transporter
DEJ43_RS15970	COG0515	serine threonine protein kinase
DEJ43_RS15970	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DEJ43_RS15975	COG0129	dihydroxy-acid dehydratase activity
DEJ43_RS15985	COG1082	Xylose isomerase domain protein TIM barrel
DEJ43_RS15990	COG0248	Ppx GppA phosphatase
DEJ43_RS16010	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
DEJ43_RS16020	COG0671	phosphoesterase, PA-phosphatase related
DEJ43_RS16025	COG1194	a g-specific adenine glycosylase
DEJ43_RS16030	COG1595	DNA-templated transcription, initiation
DEJ43_RS16040	COG0745	RESPONSE REGULATOR receiver
DEJ43_RS16045	COG2205	protein histidine kinase activity
DEJ43_RS16060	COG0739	heme binding
DEJ43_RS16090	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
DEJ43_RS16110	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
DEJ43_RS16115	COG0157	Belongs to the NadC ModD family
DEJ43_RS16120	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
DEJ43_RS16125	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
DEJ43_RS16135	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
DEJ43_RS16150	COG1660	Displays ATPase and GTPase activities
DEJ43_RS16155	COG2197	response regulator
DEJ43_RS16170	COG0649	NAD binding
DEJ43_RS16180	COG1732	Glycine betaine
DEJ43_RS16205	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
DEJ43_RS16205	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
DEJ43_RS16220	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DEJ43_RS16235	COG0302	gtp cyclohydrolase
DEJ43_RS16250	COG0037	tRNA processing
DEJ43_RS16260	COG2027	D-alanyl-D-alanine carboxypeptidase
DEJ43_RS16265	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
DEJ43_RS16275	COG0586	Pfam SNARE associated Golgi protein
DEJ43_RS16280	COG0393	Putative heavy-metal-binding
DEJ43_RS16290	COG0076	glutamate decarboxylase activity
DEJ43_RS16315	COG2318	DinB family
DEJ43_RS16320	COG1012	belongs to the aldehyde dehydrogenase family
DEJ43_RS16345	COG1595	DNA-templated transcription, initiation
DEJ43_RS16355	COG1289	transmembrane transporter activity
DEJ43_RS16360	COG2226	methyltransferase
DEJ43_RS16370	COG1733	regulation of RNA biosynthetic process
DEJ43_RS16395	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DEJ43_RS16405	COG2197	response regulator
DEJ43_RS16410	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DEJ43_RS16410	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DEJ43_RS16465	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DEJ43_RS16470	COG4585	Histidine kinase
DEJ43_RS16475	COG2197	response regulator
DEJ43_RS16490	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DEJ43_RS16495	COG1754	DNA topoisomerase type I activity
DEJ43_RS16495	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DEJ43_RS16535	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
DEJ43_RS16545	COG1366	Belongs to the anti-sigma-factor antagonist family
DEJ43_RS16550	COG1111	helicase
DEJ43_RS16550	COG1205	dead DEAH box helicase
DEJ43_RS16615	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DEJ43_RS16620	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
DEJ43_RS16630	COG2267	carboxylic ester hydrolase activity
DEJ43_RS16665	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DEJ43_RS16690	COG0003	Pfam Anion-transporting ATPase
DEJ43_RS16700	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
DEJ43_RS16710	COG1408	metallophosphoesterase
DEJ43_RS16755	COG2815	serine threonine protein kinase
DEJ43_RS16755	COG0515	serine threonine protein kinase
DEJ43_RS16780	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
DEJ43_RS16800	COG1595	DNA-templated transcription, initiation
DEJ43_RS16820	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
DEJ43_RS16825	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
DEJ43_RS16845	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DEJ43_RS16850	COG0693	protein deglycase activity
DEJ43_RS16860	COG2402	Toxic component of a toxin-antitoxin (TA) module. An RNase
DEJ43_RS16905	COG0583	DNA-binding transcription factor activity
DEJ43_RS16910	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS16915	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DEJ43_RS16935	COG1131	(ABC) transporter
DEJ43_RS16940	COG3559	Exporter of polyketide antibiotics
DEJ43_RS16950	COG2197	response regulator
DEJ43_RS16955	COG4585	Histidine kinase
DEJ43_RS17000	COG0477	Major facilitator Superfamily
DEJ43_RS17010	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
DEJ43_RS17015	COG0191	fructose-bisphosphate aldolase activity
DEJ43_RS17020	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DEJ43_RS17035	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
DEJ43_RS17060	COG0542	response to heat
DEJ43_RS17085	COG0789	Transcriptional regulator
DEJ43_RS17090	COG0484	heat shock protein binding
DEJ43_RS17095	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
DEJ43_RS17100	COG0443	Heat shock 70 kDa protein
DEJ43_RS17110	COG0247	lactate metabolic process
DEJ43_RS17110	COG2181	nitrate reductase activity
DEJ43_RS17130	COG0717	Belongs to the dCTP deaminase family
DEJ43_RS17140	COG2197	response regulator
DEJ43_RS17145	COG4585	Histidine kinase
DEJ43_RS17165	COG1090	epimerase
DEJ43_RS17175	COG0583	DNA-binding transcription factor activity
DEJ43_RS17185	COG0204	Acyl-transferase
DEJ43_RS17185	COG0318	PFAM AMP-dependent synthetase and ligase
DEJ43_RS17220	COG2072	flavoprotein involved in K transport
DEJ43_RS17225	COG0640	Transcriptional regulator
DEJ43_RS17230	COG1247	-acetyltransferase
DEJ43_RS17235	COG2072	flavoprotein involved in K transport
DEJ43_RS17250	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DEJ43_RS17255	COG1278	Cold shock
DEJ43_RS17260	COG0513	Belongs to the DEAD box helicase family
DEJ43_RS17280	COG0739	heme binding
DEJ43_RS17285	COG2197	response regulator
DEJ43_RS17290	COG3851	Histidine kinase
DEJ43_RS17300	COG1309	transcriptional regulator
DEJ43_RS17310	COG1595	DNA-templated transcription, initiation
DEJ43_RS17335	COG1595	DNA-templated transcription, initiation
DEJ43_RS17365	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
DEJ43_RS17385	COG0626	cystathionine gamma-synthase activity
DEJ43_RS17390	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DEJ43_RS17425	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
DEJ43_RS17460	COG1278	Cold shock
DEJ43_RS17485	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DEJ43_RS17515	COG0488	(ABC) transporter
DEJ43_RS17550	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
DEJ43_RS17580	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DEJ43_RS17585	COG0431	NADPH-dependent FMN reductase
DEJ43_RS17590	COG0589	response to stress
DEJ43_RS17630	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DEJ43_RS17685	COG2205	protein histidine kinase activity
DEJ43_RS17690	COG0745	RESPONSE REGULATOR receiver
DEJ43_RS17695	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DEJ43_RS17735	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
DEJ43_RS17750	COG0628	permease
DEJ43_RS17755	COG1741	Belongs to the pirin family
DEJ43_RS17765	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS17770	COG1362	aminopeptidase activity
DEJ43_RS17800	COG0626	cystathionine gamma-synthase activity
DEJ43_RS17805	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DEJ43_RS17825	COG2271	Major facilitator Superfamily
DEJ43_RS17840	COG0508	dehydrogenase complex catalyzes the overall conversion of
DEJ43_RS17845	COG0022	dehydrogenase e1 component
DEJ43_RS17870	COG0515	serine threonine protein kinase
DEJ43_RS17875	COG0515	serine threonine protein kinase
DEJ43_RS17890	COG1136	(ABC) transporter
DEJ43_RS17890	COG4591	ABC-type transport system involved in lipoprotein release permease component
DEJ43_RS17910	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DEJ43_RS17915	COG0303	'Molybdopterin
DEJ43_RS17925	COG0508	dehydrogenase complex catalyzes the overall conversion of
DEJ43_RS17940	COG1522	sequence-specific DNA binding
DEJ43_RS17945	COG1309	transcriptional regulator
DEJ43_RS17950	COG1250	3-hydroxyacyl-CoA dehydrogenase
DEJ43_RS17975	COG3396	Phenylacetate-CoA oxygenase
DEJ43_RS17980	COG3460	Phenylacetate-CoA oxygenase
DEJ43_RS17985	COG3396	Phenylacetate-CoA oxygenase
DEJ43_RS17990	COG2151	metal-sulfur cluster biosynthetic enzyme
DEJ43_RS17995	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DEJ43_RS18005	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DEJ43_RS18030	COG2197	response regulator
DEJ43_RS18045	COG1716	ATPase activity
DEJ43_RS18050	COG1716	ATPase activity
DEJ43_RS18065	COG0768	penicillin binding
DEJ43_RS18075	COG0515	serine threonine protein kinase
DEJ43_RS18080	COG3764	Sortase (surface protein transpeptidase)
DEJ43_RS18085	COG3764	Sortase (surface protein transpeptidase)
DEJ43_RS18095	COG3764	Sortase (surface protein transpeptidase)
DEJ43_RS18110	COG0705	Rhomboid family
DEJ43_RS18140	COG0515	serine threonine protein kinase
DEJ43_RS18165	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DEJ43_RS18170	COG0187	DNA topoisomerase II activity
DEJ43_RS18175	COG5512	Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives
DEJ43_RS18180	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DEJ43_RS18185	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
DEJ43_RS18190	COG0592	DNA-directed DNA polymerase activity
DEJ43_RS18205	COG0230	Belongs to the bacterial ribosomal protein bL34 family
DEJ43_RS18215	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
DEJ43_RS18220	COG0706	membrane insertase activity
DEJ43_RS18230	COG0357	Ribosomal RNA small subunit methyltransferase G
DEJ43_RS18235	COG1192	Involved in chromosome partitioning
DEJ43_RS18250	COG3118	belongs to the thioredoxin family
DEJ43_RS18255	COG0492	ferredoxin-NADP+ reductase activity
DEJ43_RS18265	COG1595	DNA-templated transcription, initiation
DEJ43_RS18270	COG2815	serine threonine protein kinase
DEJ43_RS18270	COG0515	serine threonine protein kinase
DEJ43_RS18285	COG0617	tRNA 3'-terminal CCA addition
DEJ43_RS18305	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DEJ43_RS18330	COG0360	Binds together with S18 to 16S ribosomal RNA
DEJ43_RS18335	COG0629	single-stranded DNA binding
DEJ43_RS18340	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DEJ43_RS18345	COG0359	binds to the 23S rRNA
DEJ43_RS18350	COG0534	Mate efflux family protein
DEJ43_RS18360	COG0305	Participates in initiation and elongation during chromosome replication
DEJ43_RS18370	COG0456	acetyltransferase
DEJ43_RS18395	COG0494	nUDIX hydrolase
DEJ43_RS18405	COG0626	cystathionine gamma-synthase activity
DEJ43_RS18410	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DEJ43_RS18415	COG1950	PFAM Membrane protein of
DEJ43_RS18420	COG0662	Cupin 2, conserved barrel domain protein
DEJ43_RS18445	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
DEJ43_RS18455	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
DEJ43_RS18460	COG1609	Transcriptional regulator
DEJ43_RS18465	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DEJ43_RS18475	COG1271	oxidase subunit
DEJ43_RS18480	COG1294	oxidase, subunit
DEJ43_RS18485	COG4988	ABC transporter
DEJ43_RS18495	COG0561	phosphatase activity
DEJ43_RS18515	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
DEJ43_RS18520	COG0789	Transcriptional regulator
DEJ43_RS18535	COG1131	(ABC) transporter
DEJ43_RS18555	COG2807	transmembrane transport
DEJ43_RS18575	COG0561	phosphatase activity
DEJ43_RS18580	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
DEJ43_RS18590	COG2837	iron assimilation
DEJ43_RS18605	COG1999	signal sequence binding
DEJ43_RS18625	COG0006	proline dipeptidase activity
DEJ43_RS18645	COG0653	protein targeting
DEJ43_RS18660	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DEJ43_RS18675	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
DEJ43_RS18685	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS18695	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS18715	COG1595	DNA-templated transcription, initiation
DEJ43_RS18720	COG0318	PFAM AMP-dependent synthetase and ligase
DEJ43_RS18725	COG0784	Response regulator, receiver
DEJ43_RS18780	COG2329	Antibiotic biosynthesis monooxygenase
DEJ43_RS18790	COG0745	RESPONSE REGULATOR receiver
DEJ43_RS18795	COG2205	protein histidine kinase activity
DEJ43_RS18805	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
DEJ43_RS18810	COG0477	Major facilitator Superfamily
DEJ43_RS18820	COG0477	Major facilitator Superfamily
DEJ43_RS18825	COG1846	Transcriptional regulator
DEJ43_RS18835	COG1309	transcriptional regulator
DEJ43_RS18855	COG1191	sigma factor activity
DEJ43_RS18860	COG1191	sigma factor activity
DEJ43_RS18890	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
DEJ43_RS18905	COG0433	COG0433 Predicted ATPase
DEJ43_RS18920	COG2267	carboxylic ester hydrolase activity
DEJ43_RS18935	COG0655	NAD(P)H dehydrogenase (quinone) activity
DEJ43_RS18940	COG1937	Protein conserved in bacteria
DEJ43_RS18960	COG3795	YCII-related domain
DEJ43_RS18965	COG2095	MarC family integral membrane protein
DEJ43_RS18985	COG0667	Aldo Keto reductase
DEJ43_RS19015	COG1136	(ABC) transporter
DEJ43_RS19035	COG1595	DNA-templated transcription, initiation
DEJ43_RS19060	COG0151	Belongs to the GarS family
DEJ43_RS19085	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
DEJ43_RS19095	COG2197	response regulator
DEJ43_RS19130	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DEJ43_RS19135	COG0047	phosphoribosylformylglycinamidine synthase activity
DEJ43_RS19140	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DEJ43_RS19175	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
DEJ43_RS19205	COG1643	Atp-dependent helicase
DEJ43_RS19215	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DEJ43_RS19215	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
DEJ43_RS19220	COG0785	Cytochrome C biogenesis protein
DEJ43_RS19250	COG0513	Belongs to the DEAD box helicase family
DEJ43_RS19270	COG1597	lipid kinase activity
DEJ43_RS19280	COG1595	DNA-templated transcription, initiation
DEJ43_RS19295	COG0789	Transcriptional regulator
DEJ43_RS19310	COG0667	Aldo Keto reductase
DEJ43_RS19320	COG0220	tRNA (guanine-N7-)-methyltransferase activity
DEJ43_RS19325	COG0579	oxidoreductase
DEJ43_RS19355	COG1252	NADH dehydrogenase
DEJ43_RS19370	COG1846	Transcriptional regulator
DEJ43_RS19395	COG2197	response regulator
DEJ43_RS19400	COG4585	Histidine kinase
DEJ43_RS19410	COG1131	(ABC) transporter
DEJ43_RS19425	COG1846	Transcriptional regulator
DEJ43_RS19465	COG0671	phosphoesterase, PA-phosphatase related
DEJ43_RS19480	COG1937	Protein conserved in bacteria
DEJ43_RS19490	COG0306	phosphate transporter
DEJ43_RS19510	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DEJ43_RS19520	COG0494	nUDIX hydrolase
DEJ43_RS19520	COG0406	alpha-ribazole phosphatase activity
DEJ43_RS19545	COG1725	Transcriptional regulator
DEJ43_RS19550	COG0456	acetyltransferase
DEJ43_RS19555	COG0737	Belongs to the 5'-nucleotidase family
DEJ43_RS19580	COG0745	RESPONSE REGULATOR receiver
DEJ43_RS19585	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DEJ43_RS19590	COG1609	Transcriptional regulator
DEJ43_RS19595	COG0745	RESPONSE REGULATOR receiver
DEJ43_RS19620	COG2897	thiosulfate sulfurtransferase activity
DEJ43_RS19660	COG3485	protocatechuate 3,4-dioxygenase
DEJ43_RS19665	COG0735	belongs to the Fur family
DEJ43_RS19675	COG1490	D-aminoacyl-tRNA deacylase activity
DEJ43_RS19685	COG4552	Acetyltransferase involved in intracellular survival and related
DEJ43_RS19710	COG3973	AAA domain
DEJ43_RS19730	COG2226	methyltransferase
DEJ43_RS19735	COG0346	lactoylglutathione lyase activity
DEJ43_RS19775	COG0438	transferase activity, transferring glycosyl groups
DEJ43_RS19795	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
DEJ43_RS19805	COG0588	phosphoglycerate mutase activity
DEJ43_RS19830	COG5002	protein histidine kinase activity
DEJ43_RS19850	COG1329	Transcriptional regulator
DEJ43_RS19855	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
DEJ43_RS19860	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
DEJ43_RS19865	COG0215	cysteine-tRNA ligase activity
DEJ43_RS19880	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
DEJ43_RS19890	COG3842	ATPase activity
DEJ43_RS19900	COG4974	Belongs to the 'phage' integrase family
DEJ43_RS19950	COG0791	NLP P60 protein
DEJ43_RS19950	COG1388	LysM domain
DEJ43_RS20055	COG2188	Transcriptional regulator
DEJ43_RS20060	COG1434	Gram-negative-bacterium-type cell wall biogenesis
DEJ43_RS20075	COG3177	Filamentation induced by cAMP protein fic
DEJ43_RS20090	COG0546	phosphoglycolate phosphatase activity
DEJ43_RS20110	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DEJ43_RS20160	COG2197	response regulator
DEJ43_RS20190	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DEJ43_RS20225	COG1653	transport
DEJ43_RS20255	COG0463	Glycosyl transferase, family 2
DEJ43_RS20275	COG0459	protein refolding
DEJ43_RS20285	COG2226	methyltransferase
DEJ43_RS20300	COG0667	Aldo Keto reductase
DEJ43_RS20320	COG1263	PTS System
DEJ43_RS20320	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DEJ43_RS20325	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
DEJ43_RS20330	COG1737	Transcriptional regulator
DEJ43_RS20345	COG3896	Chloramphenicol phosphotransferase-like protein
DEJ43_RS20395	COG4106	trans-aconitate 2-methyltransferase activity
DEJ43_RS20410	COG0736	holo-[acyl-carrier-protein] synthase activity
DEJ43_RS20420	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
DEJ43_RS20425	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DEJ43_RS20430	COG1410	methionine synthase
DEJ43_RS20430	COG0646	methionine synthase
DEJ43_RS20565	COG0438	transferase activity, transferring glycosyl groups
DEJ43_RS20610	COG1937	Protein conserved in bacteria
DEJ43_RS20630	COG3142	Participates in the control of copper homeostasis
DEJ43_RS20645	COG0346	lactoylglutathione lyase activity
DEJ43_RS20650	COG3973	AAA domain
DEJ43_RS20660	COG1061	Type III restriction enzyme res subunit
DEJ43_RS20680	COG1120	ATPase activity
DEJ43_RS20685	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DEJ43_RS20690	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DEJ43_RS20705	COG1278	Cold shock
DEJ43_RS20710	COG2107	Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
DEJ43_RS20715	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DEJ43_RS20725	COG2814	Major facilitator Superfamily
DEJ43_RS20755	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
DEJ43_RS20765	COG2252	PERMEase
DEJ43_RS20790	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
DEJ43_RS20795	COG0667	Aldo Keto reductase
DEJ43_RS20820	COG2267	carboxylic ester hydrolase activity
DEJ43_RS20830	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
DEJ43_RS20835	COG0247	lactate metabolic process
DEJ43_RS20835	COG0277	FAD linked oxidase domain protein
DEJ43_RS20850	COG0583	DNA-binding transcription factor activity
DEJ43_RS20860	COG1262	PFAM Formylglycine-generating sulfatase enzyme
DEJ43_RS20890	COG0640	Transcriptional regulator
DEJ43_RS20920	COG0697	spore germination
DEJ43_RS20950	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS20980	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
DEJ43_RS21015	COG0318	PFAM AMP-dependent synthetase and ligase
DEJ43_RS21025	COG1309	transcriptional regulator
DEJ43_RS21045	COG0259	pyridoxamine-phosphate oxidase activity
DEJ43_RS21055	COG4821	SIS domain
DEJ43_RS21065	COG0596	Alpha beta hydrolase
DEJ43_RS21065	COG2945	thiolester hydrolase activity
DEJ43_RS21095	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DEJ43_RS21105	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DEJ43_RS21120	COG4152	abc transporter atp-binding protein
DEJ43_RS21170	COG0318	PFAM AMP-dependent synthetase and ligase
DEJ43_RS21180	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS21185	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS21205	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS21230	COG2814	Major facilitator Superfamily
DEJ43_RS21235	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DEJ43_RS21240	COG1024	Enoyl-CoA hydratase
DEJ43_RS21255	COG2072	flavoprotein involved in K transport
DEJ43_RS21270	COG0515	serine threonine protein kinase
DEJ43_RS21270	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DEJ43_RS21275	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DEJ43_RS21300	COG1278	Cold shock
DEJ43_RS21305	COG1427	Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
DEJ43_RS21310	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
DEJ43_RS21320	COG2226	methyltransferase
DEJ43_RS21335	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
DEJ43_RS21350	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DEJ43_RS21355	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DEJ43_RS21360	COG0649	NAD binding
DEJ43_RS21370	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
DEJ43_RS21375	COG1034	ATP synthesis coupled electron transport
DEJ43_RS21380	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
DEJ43_RS21385	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DEJ43_RS21395	COG0713	ATP synthesis coupled electron transport
DEJ43_RS21400	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DEJ43_RS21410	COG1007	ATP synthesis coupled electron transport
DEJ43_RS21420	COG2207	Transcriptional regulator
DEJ43_RS21430	COG0179	Fumarylacetoacetate (FAA) hydrolase
DEJ43_RS21445	COG3104	oligopeptide transport
DEJ43_RS21450	COG0142	geranyltranstransferase activity
DEJ43_RS21485	COG1733	regulation of RNA biosynthetic process
DEJ43_RS21505	COG0702	epimerase
DEJ43_RS21510	COG1733	regulation of RNA biosynthetic process
DEJ43_RS21530	COG1013	pyruvate-flavodoxin oxidoreductase activity
DEJ43_RS21535	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
DEJ43_RS21535	COG0674	pyruvate-flavodoxin oxidoreductase activity
DEJ43_RS21555	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DEJ43_RS21560	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DEJ43_RS21565	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DEJ43_RS21570	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
DEJ43_RS21575	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DEJ43_RS21580	COG0839	Belongs to the complex I subunit 6 family
DEJ43_RS21585	COG0713	ATP synthesis coupled electron transport
DEJ43_RS21600	COG1007	ATP synthesis coupled electron transport
DEJ43_RS21610	COG0501	Belongs to the peptidase M48B family
DEJ43_RS21615	COG3304	Inner membrane component domain
DEJ43_RS21635	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DEJ43_RS21640	COG1666	GTP binding
DEJ43_RS21650	COG0702	epimerase
DEJ43_RS21655	COG0402	S-adenosylhomocysteine deaminase activity
DEJ43_RS21670	COG0267	Belongs to the bacterial ribosomal protein bL33 family
DEJ43_RS21675	COG2030	dehydratase
DEJ43_RS21690	COG0477	Major facilitator Superfamily
DEJ43_RS21695	COG0812	UDP-N-acetylmuramate dehydrogenase activity
DEJ43_RS21700	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DEJ43_RS21710	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
DEJ43_RS21715	COG0436	Aminotransferase
DEJ43_RS21725	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DEJ43_RS21735	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
DEJ43_RS21740	COG0081	regulation of translation
DEJ43_RS21750	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
DEJ43_RS21755	COG0222	ribosome binding
DEJ43_RS21765	COG0085	RNA polymerase activity
DEJ43_RS21770	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DEJ43_RS21895	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
DEJ43_RS21900	COG0049	tRNA binding
DEJ43_RS21905	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DEJ43_RS21910	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
DEJ43_RS21925	COG4941	Belongs to the sigma-70 factor family
DEJ43_RS21930	COG0051	transcription antitermination factor activity, RNA binding
DEJ43_RS21935	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
DEJ43_RS21940	COG0088	Forms part of the polypeptide exit tunnel
DEJ43_RS21945	COG0089	rRNA binding
DEJ43_RS21950	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
DEJ43_RS21955	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DEJ43_RS21960	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
DEJ43_RS21965	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
DEJ43_RS21970	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DEJ43_RS21975	COG0255	Belongs to the universal ribosomal protein uL29 family
DEJ43_RS21980	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
DEJ43_RS21985	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DEJ43_RS21990	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
DEJ43_RS21995	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
DEJ43_RS22000	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DEJ43_RS22010	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
DEJ43_RS22015	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
DEJ43_RS22020	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
DEJ43_RS22025	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
DEJ43_RS22030	COG1841	ribosomal large subunit assembly
DEJ43_RS22035	COG0200	Binds to the 23S rRNA
DEJ43_RS22045	COG0563	adenylate kinase activity
DEJ43_RS22060	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
DEJ43_RS22065	COG0257	Belongs to the bacterial ribosomal protein bL36 family
DEJ43_RS22070	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
DEJ43_RS22075	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
DEJ43_RS22080	COG0202	RNA polymerase activity
DEJ43_RS22085	COG0203	ribosomal protein L17
DEJ43_RS22090	COG0101	tRNA pseudouridine synthase activity
DEJ43_RS22100	COG0488	(ABC) transporter
DEJ43_RS22105	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
DEJ43_RS22110	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
DEJ43_RS22115	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DEJ43_RS22125	COG1072	(Pantothenic acid kinase))
DEJ43_RS22135	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DEJ43_RS22140	COG0736	holo-[acyl-carrier-protein] synthase activity
DEJ43_RS22155	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DEJ43_RS22165	COG0802	atpase or kinase
DEJ43_RS22185	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
DEJ43_RS22195	COG0726	polysaccharide deacetylase
DEJ43_RS22225	COG0726	polysaccharide deacetylase
DEJ43_RS22240	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
DEJ43_RS22255	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DEJ43_RS22260	COG0395	ABC-type sugar transport system, permease component
DEJ43_RS22265	COG1175	transmembrane transport
DEJ43_RS22285	COG4221	oxidoreductase activity
DEJ43_RS22310	COG1595	DNA-templated transcription, initiation
DEJ43_RS22325	COG0516	GMP reductase activity
DEJ43_RS22335	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
DEJ43_RS22350	COG0515	serine threonine protein kinase
DEJ43_RS22355	COG1012	belongs to the aldehyde dehydrogenase family
DEJ43_RS22370	COG0519	Catalyzes the synthesis of GMP from XMP
DEJ43_RS22370	COG0518	GMP synthase (glutamine-hydrolyzing) activity
DEJ43_RS22405	COG2197	response regulator
DEJ43_RS22435	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
DEJ43_RS22455	COG0714	Associated with various cellular activities
DEJ43_RS22465	COG3552	Protein containing von Willebrand factor type A (VWA) domain
DEJ43_RS22470	COG0045	succinate-CoA ligase (ADP-forming) activity
DEJ43_RS22500	COG0138	bifunctional purine biosynthesis protein purh
DEJ43_RS22525	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
DEJ43_RS22540	COG0039	L-malate dehydrogenase activity
DEJ43_RS22560	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
DEJ43_RS22565	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DEJ43_RS22570	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DEJ43_RS22585	COG0754	glutathionylspermidine amidase activity
DEJ43_RS22590	COG0726	polysaccharide deacetylase
DEJ43_RS22595	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DEJ43_RS22600	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
DEJ43_RS22610	COG1595	DNA-templated transcription, initiation
DEJ43_RS22615	COG0180	Tryptophanyl-tRNA synthetase
DEJ43_RS22640	COG1686	Belongs to the peptidase S11 family
DEJ43_RS22655	COG1408	metallophosphoesterase
DEJ43_RS22665	COG1309	transcriptional regulator
DEJ43_RS22680	COG0596	Alpha beta hydrolase
DEJ43_RS22700	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
DEJ43_RS22705	COG1053	succinate dehydrogenase
DEJ43_RS22715	COG2009	succinate dehydrogenase
DEJ43_RS22745	COG1595	DNA-templated transcription, initiation
DEJ43_RS22760	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
DEJ43_RS22760	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
DEJ43_RS22780	COG1216	Glycosyl transferase, family 2
DEJ43_RS22795	COG2089	acid synthase
DEJ43_RS22805	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
DEJ43_RS22805	COG1473	amidohydrolase
DEJ43_RS22810	COG1744	ABC transporter substrate-binding protein PnrA-like
DEJ43_RS22815	COG3845	ABC transporter
DEJ43_RS22820	COG4603	Belongs to the binding-protein-dependent transport system permease family
DEJ43_RS22825	COG1079	Belongs to the binding-protein-dependent transport system permease family
DEJ43_RS22845	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DEJ43_RS22865	COG2814	Major facilitator Superfamily
DEJ43_RS22870	COG0583	DNA-binding transcription factor activity
DEJ43_RS22885	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
DEJ43_RS22910	COG2205	protein histidine kinase activity
DEJ43_RS22915	COG0745	RESPONSE REGULATOR receiver
DEJ43_RS22920	COG1595	DNA-templated transcription, initiation
DEJ43_RS22935	COG2310	stress, protein
DEJ43_RS22940	COG1012	belongs to the aldehyde dehydrogenase family
DEJ43_RS22945	COG1012	belongs to the aldehyde dehydrogenase family
DEJ43_RS22970	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DEJ43_RS22990	COG1349	DNA-binding transcription factor activity
DEJ43_RS23000	COG4770	biotin carboxylase activity
DEJ43_RS23010	COG0424	maF-like protein
DEJ43_RS23030	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
DEJ43_RS23045	COG1024	Enoyl-CoA hydratase
DEJ43_RS23055	COG2986	histidine ammonia-lyase
DEJ43_RS23070	COG1376	ErfK ybiS ycfS ynhG family protein
DEJ43_RS23080	COG1064	alcohol dehydrogenase
DEJ43_RS23085	COG0488	(ABC) transporter
DEJ43_RS23095	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DEJ43_RS23130	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DEJ43_RS23145	COG0515	serine threonine protein kinase
DEJ43_RS23145	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DEJ43_RS23150	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DEJ43_RS23150	COG0515	serine threonine protein kinase
DEJ43_RS23155	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DEJ43_RS23165	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
DEJ43_RS23175	COG1331	Highly conserved protein containing a thioredoxin domain
DEJ43_RS23185	COG1316	TRANSCRIPTIONal
DEJ43_RS23210	COG0492	ferredoxin-NADP+ reductase activity
DEJ43_RS23215	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
DEJ43_RS23235	COG0438	transferase activity, transferring glycosyl groups
DEJ43_RS23245	COG0728	peptidoglycan biosynthetic process
DEJ43_RS23255	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
DEJ43_RS23260	COG0438	transferase activity, transferring glycosyl groups
DEJ43_RS23330	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
DEJ43_RS23370	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
DEJ43_RS23385	COG1414	Transcriptional regulator
DEJ43_RS23390	COG0251	oxidation-reduction process
DEJ43_RS23395	COG2610	gluconate transmembrane transporter activity
DEJ43_RS23470	COG2885	chlorophyll binding
DEJ43_RS23505	COG0667	Aldo Keto reductase
DEJ43_RS23510	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DEJ43_RS23515	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
DEJ43_RS23535	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DEJ43_RS23540	COG0450	alkyl hydroperoxide reductase
DEJ43_RS23555	COG1136	(ABC) transporter
DEJ43_RS23565	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
DEJ43_RS23580	COG0114	fumarate hydratase activity
DEJ43_RS23605	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
DEJ43_RS23605	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
DEJ43_RS23630	COG0778	Nitroreductase
DEJ43_RS23635	COG1722	exodeoxyribonuclease VII activity
DEJ43_RS23640	COG1570	exodeoxyribonuclease VII activity
DEJ43_RS23645	COG0531	amino acid
DEJ43_RS23650	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
DEJ43_RS23655	COG1940	carbohydrate kinase activity
DEJ43_RS23665	COG0012	GTP binding
DEJ43_RS23725	COG3903	Transcriptional regulator
DEJ43_RS23725	COG3629	intracellular signal transduction
DEJ43_RS23785	COG1842	Phage shock protein A
DEJ43_RS23810	COG1053	succinate dehydrogenase
DEJ43_RS23830	COG1217	gtp-binding protein TYPA
DEJ43_RS23840	COG0601	transmembrane transport
DEJ43_RS23845	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DEJ43_RS23850	COG0444	Belongs to the ABC transporter superfamily
DEJ43_RS23855	COG4608	Belongs to the ABC transporter superfamily
DEJ43_RS23870	COG0601	transmembrane transport
DEJ43_RS23875	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DEJ43_RS23880	COG0444	Belongs to the ABC transporter superfamily
DEJ43_RS23885	COG4608	Belongs to the ABC transporter superfamily
DEJ43_RS23905	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
DEJ43_RS23975	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DEJ43_RS23980	COG1611	Belongs to the LOG family
DEJ43_RS23985	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DEJ43_RS23995	COG0519	Catalyzes the synthesis of GMP from XMP
DEJ43_RS24000	COG1024	Enoyl-CoA hydratase
DEJ43_RS24015	COG1595	DNA-templated transcription, initiation
DEJ43_RS24025	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DEJ43_RS24030	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
DEJ43_RS24065	COG0598	Magnesium transport protein CorA
DEJ43_RS24095	COG2095	MarC family integral membrane protein
DEJ43_RS24105	COG1432	Conserved Protein
DEJ43_RS24115	COG0513	Belongs to the DEAD box helicase family
DEJ43_RS24160	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DEJ43_RS24165	COG0601	transmembrane transport
DEJ43_RS24175	COG0438	transferase activity, transferring glycosyl groups
DEJ43_RS24235	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DEJ43_RS24275	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
DEJ43_RS24330	COG3480	Lon protease (S16) C-terminal proteolytic domain
DEJ43_RS24340	COG1615	UPF0182 protein
DEJ43_RS24365	COG0753	catalase activity
DEJ43_RS24375	COG0483	inositol monophosphate 1-phosphatase activity
DEJ43_RS24385	COG2076	Multidrug Resistance protein
DEJ43_RS24395	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
DEJ43_RS24405	COG2135	peptidase activity
DEJ43_RS24415	COG1595	DNA-templated transcription, initiation
DEJ43_RS24420	COG5662	AntiSigma factor
DEJ43_RS24425	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
DEJ43_RS24425	COG2199	diguanylate cyclase activity
DEJ43_RS24440	COG0242	peptide deformylase activity
DEJ43_RS24445	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DEJ43_RS24480	COG0667	Aldo Keto reductase
DEJ43_RS24495	COG1216	Glycosyl transferase, family 2
DEJ43_RS24495	COG0463	Glycosyl transferase, family 2
DEJ43_RS24500	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DEJ43_RS24505	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DEJ43_RS24520	COG1215	transferase activity, transferring glycosyl groups
DEJ43_RS24545	COG2188	Transcriptional regulator
DEJ43_RS24550	COG2182	Extracellular solute-binding protein
DEJ43_RS24555	COG1175	transmembrane transport
DEJ43_RS24560	COG0395	ABC-type sugar transport system, permease component
DEJ43_RS24565	COG1472	Belongs to the glycosyl hydrolase 3 family
DEJ43_RS24570	COG0363	glucosamine-6-phosphate deaminase activity
DEJ43_RS24575	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS24595	COG1597	lipid kinase activity
DEJ43_RS24625	COG2515	1-aminocyclopropane-1-carboxylate deaminase
DEJ43_RS24635	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DEJ43_RS24640	COG0142	geranyltranstransferase activity
DEJ43_RS24665	COG5640	endopeptidase activity
DEJ43_RS24730	COG2226	methyltransferase
DEJ43_RS24775	COG0582	viral genome integration into host DNA
DEJ43_RS24795	COG4106	trans-aconitate 2-methyltransferase activity
DEJ43_RS24800	COG1126	abc transporter atp-binding protein
DEJ43_RS24805	COG0765	amino acid transport
DEJ43_RS24820	COG0604	alcohol dehydrogenase
DEJ43_RS24885	COG0567	Dehydrogenase, E1 component
DEJ43_RS24885	COG0508	dehydrogenase complex catalyzes the overall conversion of
DEJ43_RS24890	COG2205	protein histidine kinase activity
DEJ43_RS24895	COG0745	RESPONSE REGULATOR receiver
DEJ43_RS24940	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
DEJ43_RS24960	COG1846	Transcriptional regulator
DEJ43_RS25000	COG0791	NLP P60 protein
DEJ43_RS25000	COG3883	PFAM NLP P60 protein
DEJ43_RS25030	COG0768	penicillin binding
DEJ43_RS25040	COG2205	protein histidine kinase activity
DEJ43_RS25060	COG3285	dna ligase
DEJ43_RS25060	COG1793	dna ligase
DEJ43_RS25065	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
DEJ43_RS25075	COG0745	RESPONSE REGULATOR receiver
DEJ43_RS25080	COG0018	arginyl-trna synthetase
DEJ43_RS25080	COG0018	arginyl-trna synthetase
DEJ43_RS25085	COG0019	diaminopimelate decarboxylase activity
DEJ43_RS25090	COG0460	homoserine dehydrogenase
DEJ43_RS25095	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
DEJ43_RS25100	COG0083	homoserine kinase activity
DEJ43_RS25110	COG1316	TRANSCRIPTIONal
DEJ43_RS25115	COG0254	rRNA binding
DEJ43_RS25120	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DEJ43_RS25125	COG2890	protein-(glutamine-N5) methyltransferase activity
DEJ43_RS25135	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DEJ43_RS25140	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
DEJ43_RS25160	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DEJ43_RS25165	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
DEJ43_RS25170	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DEJ43_RS25175	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
DEJ43_RS25180	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
DEJ43_RS25185	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
DEJ43_RS25190	COG0355	proton-transporting ATP synthase activity, rotational mechanism
DEJ43_RS25205	COG2197	response regulator
DEJ43_RS25210	COG4585	Histidine kinase
DEJ43_RS25240	COG1250	3-hydroxyacyl-CoA dehydrogenase
DEJ43_RS25255	COG1637	Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
DEJ43_RS25310	COG0183	Belongs to the thiolase family
DEJ43_RS25360	COG1309	transcriptional regulator
DEJ43_RS25400	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
DEJ43_RS25400	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
DEJ43_RS25440	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DEJ43_RS25445	COG0857	belongs to the CobB CobQ family
DEJ43_RS25445	COG0280	phosphate acetyltransferase
DEJ43_RS25450	COG0205	6-phosphofructokinase activity
DEJ43_RS25475	COG2365	Tyrosine phosphatase family
DEJ43_RS25485	COG4565	transcriptional regulatory protein
DEJ43_RS25495	COG1301	dicarboxylic acid transport
DEJ43_RS25510	COG1522	sequence-specific DNA binding
DEJ43_RS25515	COG0789	Transcriptional regulator
DEJ43_RS25535	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
DEJ43_RS25545	COG0366	Alpha amylase catalytic
DEJ43_RS25550	COG0366	Alpha amylase catalytic
DEJ43_RS25585	COG0058	SHG alpha-glucan phosphorylase activity
DEJ43_RS25590	COG4585	Histidine kinase
DEJ43_RS25595	COG2197	response regulator
DEJ43_RS25615	COG1132	(ABC) transporter
DEJ43_RS25620	COG1132	(ABC) transporter
DEJ43_RS25630	COG1376	ErfK ybiS ycfS ynhG family protein
DEJ43_RS25685	COG2197	response regulator
DEJ43_RS25785	COG1760	l-serine dehydratase
DEJ43_RS25790	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
DEJ43_RS25795	COG0509	glycine decarboxylation via glycine cleavage system
DEJ43_RS25800	COG0404	The glycine cleavage system catalyzes the degradation of glycine
DEJ43_RS25825	COG4166	transmembrane transport
DEJ43_RS25845	COG2860	membrane
DEJ43_RS25865	COG0482	sulfurtransferase activity
DEJ43_RS25880	COG4221	oxidoreductase activity
DEJ43_RS25890	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
DEJ43_RS25900	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DEJ43_RS25905	COG0154	amidase activity
DEJ43_RS25915	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DEJ43_RS25965	COG2409	Drug exporters of the RND superfamily
DEJ43_RS25970	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DEJ43_RS25985	COG2197	response regulator
DEJ43_RS25990	COG2133	pyrroloquinoline quinone binding
DEJ43_RS25995	COG0667	Aldo Keto reductase
DEJ43_RS26005	COG3300	MHYT domain
DEJ43_RS26005	COG5001	Diguanylate cyclase
DEJ43_RS26015	COG0440	acetolactate synthase activity
DEJ43_RS26020	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
DEJ43_RS26025	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DEJ43_RS26050	COG0506	proline dehydrogenase activity
DEJ43_RS26055	COG1012	belongs to the aldehyde dehydrogenase family
DEJ43_RS26075	COG1695	Transcriptional regulator
DEJ43_RS26085	COG0583	DNA-binding transcription factor activity
DEJ43_RS26090	COG0473	3-isopropylmalate dehydrogenase activity
DEJ43_RS26095	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DEJ43_RS26105	COG2957	Belongs to the agmatine deiminase family
DEJ43_RS26125	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DEJ43_RS26155	COG0592	DNA-directed DNA polymerase activity
DEJ43_RS26170	COG1470	cell adhesion involved in biofilm formation
DEJ43_RS26170	COG0366	Alpha amylase catalytic
DEJ43_RS26175	COG5492	domain, Protein
DEJ43_RS26180	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
DEJ43_RS26200	COG4245	von Willebrand factor, type A
DEJ43_RS26215	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DEJ43_RS26215	COG0515	serine threonine protein kinase
DEJ43_RS26230	COG2018	Roadblock/LC7 domain
DEJ43_RS26250	COG2018	Roadblock/LC7 domain
DEJ43_RS26255	COG5002	protein histidine kinase activity
DEJ43_RS26265	COG0179	Fumarylacetoacetate (FAA) hydrolase
DEJ43_RS26270	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DEJ43_RS26305	COG1414	Transcriptional regulator
DEJ43_RS26310	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
DEJ43_RS26315	COG0066	3-isopropylmalate dehydratase activity
DEJ43_RS26325	COG0776	regulation of translation
DEJ43_RS26335	COG1920	GTP binding
DEJ43_RS26345	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
DEJ43_RS26350	COG1181	Belongs to the D-alanine--D-alanine ligase family
DEJ43_RS26370	COG0351	phosphomethylpyrimidine kinase
DEJ43_RS26375	COG0227	Belongs to the bacterial ribosomal protein bL28 family
DEJ43_RS26380	COG1461	Dihydroxyacetone kinase
DEJ43_RS26385	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DEJ43_RS26390	COG0742	ribosomal rna small subunit methyltransferase
DEJ43_RS26395	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
DEJ43_RS26410	COG0333	Belongs to the bacterial ribosomal protein bL32 family
DEJ43_RS26415	COG0571	ribonuclease III activity
DEJ43_RS26420	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
DEJ43_RS26425	COG1733	regulation of RNA biosynthetic process
DEJ43_RS26430	COG0655	NAD(P)H dehydrogenase (quinone) activity
DEJ43_RS26435	COG2340	Cysteine-rich secretory protein family
DEJ43_RS26440	COG1254	Belongs to the acylphosphatase family
DEJ43_RS26450	COG1196	nuclear chromosome segregation
DEJ43_RS26455	COG0477	Major facilitator Superfamily
DEJ43_RS26465	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
DEJ43_RS26495	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
DEJ43_RS26505	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DEJ43_RS26520	COG0228	four-way junction DNA binding
DEJ43_RS26525	COG1837	Belongs to the UPF0109 family
DEJ43_RS26530	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
DEJ43_RS26535	COG0336	Belongs to the RNA methyltransferase TrmD family
DEJ43_RS26540	COG0335	large ribosomal subunit rRNA binding
DEJ43_RS26550	COG0681	Belongs to the peptidase S26 family
DEJ43_RS26560	COG0681	Belongs to the peptidase S26 family
DEJ43_RS26575	COG0792	nuclease activity
DEJ43_RS26590	COG1191	sigma factor activity
DEJ43_RS26600	COG0739	heme binding
DEJ43_RS26605	COG0052	Belongs to the universal ribosomal protein uS2 family
DEJ43_RS26610	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
DEJ43_RS26615	COG0528	UMP kinase activity
DEJ43_RS26620	COG0233	cytoplasmic translational termination
DEJ43_RS26625	COG0575	Belongs to the CDS family
DEJ43_RS26635	COG0820	rRNA (adenine-C2-)-methyltransferase activity
DEJ43_RS26645	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
DEJ43_RS26650	COG3842	ATPase activity
DEJ43_RS26665	COG1136	(ABC) transporter
DEJ43_RS26670	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DEJ43_RS26680	COG1012	belongs to the aldehyde dehydrogenase family
DEJ43_RS26705	COG2197	response regulator
DEJ43_RS26710	COG4585	Histidine kinase
DEJ43_RS26720	COG0584	glycerophosphoryl diester phosphodiesterase
DEJ43_RS26725	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
DEJ43_RS26745	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
DEJ43_RS26750	COG3842	ATPase activity
DEJ43_RS26755	COG1176	ABC-type spermidine putrescine transport system, permease component I
DEJ43_RS26760	COG1177	transmembrane transport
DEJ43_RS26765	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DEJ43_RS26795	COG2508	Transcriptional regulator
DEJ43_RS26805	COG0697	spore germination
DEJ43_RS26810	COG1012	belongs to the aldehyde dehydrogenase family
DEJ43_RS26825	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
DEJ43_RS26830	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
DEJ43_RS26835	COG0750	zinc metalloprotease
DEJ43_RS26840	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
DEJ43_RS26855	COG0442	prolyl-tRNA aminoacylation
DEJ43_RS26860	COG0330	HflC and HflK could
DEJ43_RS26880	COG0779	Required for maturation of 30S ribosomal subunits
DEJ43_RS26895	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
DEJ43_RS26905	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DEJ43_RS26910	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DEJ43_RS26925	COG2124	cytochrome p450
DEJ43_RS26930	COG3424	synthase
DEJ43_RS26960	COG0601	transmembrane transport
DEJ43_RS26965	COG4166	transmembrane transport
DEJ43_RS26970	COG0455	bacterial-type flagellum organization
DEJ43_RS26985	COG3266	domain, Protein
DEJ43_RS26990	COG1404	Belongs to the peptidase S8 family
DEJ43_RS27010	COG1674	ftsk spoiiie
DEJ43_RS27020	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
DEJ43_RS27025	COG1185	polyribonucleotide nucleotidyltransferase activity
DEJ43_RS27030	COG0612	Peptidase, M16
DEJ43_RS27035	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
DEJ43_RS27055	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
DEJ43_RS27060	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DEJ43_RS27065	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DEJ43_RS27090	COG2208	phosphoserine phosphatase activity
DEJ43_RS27090	COG2770	Histidine kinase
DEJ43_RS27095	COG2205	protein histidine kinase activity
DEJ43_RS27095	COG3437	response regulator, receiver
DEJ43_RS27095	COG4999	Histidine kinase
DEJ43_RS27095	COG3850	Histidine kinase
DEJ43_RS27105	COG1674	ftsk spoiiie
DEJ43_RS27115	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DEJ43_RS27125	COG1546	Belongs to the CinA family
DEJ43_RS27125	COG1058	Belongs to the CinA family
DEJ43_RS27130	COG1396	sequence-specific DNA binding
DEJ43_RS27140	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS27145	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
DEJ43_RS27150	COG1201	RNA secondary structure unwinding
DEJ43_RS27190	COG1271	oxidase subunit
DEJ43_RS27195	COG2197	response regulator
DEJ43_RS27225	COG0346	lactoylglutathione lyase activity
DEJ43_RS27245	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DEJ43_RS27255	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DEJ43_RS27270	COG0765	amino acid transport
DEJ43_RS27275	COG0765	amino acid transport
DEJ43_RS27280	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DEJ43_RS27285	COG1126	abc transporter atp-binding protein
DEJ43_RS27290	COG0745	RESPONSE REGULATOR receiver
DEJ43_RS27295	COG2205	protein histidine kinase activity
DEJ43_RS27375	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DEJ43_RS27385	COG0113	porphobilinogen synthase activity
DEJ43_RS27400	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
DEJ43_RS27405	COG1764	response to oxidative stress
DEJ43_RS27410	COG1804	L-carnitine dehydratase bile acid-inducible protein F
DEJ43_RS27415	COG2197	response regulator
DEJ43_RS27420	COG4585	Histidine kinase
DEJ43_RS27425	COG0586	Pfam SNARE associated Golgi protein
DEJ43_RS27430	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DEJ43_RS27455	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
DEJ43_RS27465	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
DEJ43_RS27470	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DEJ43_RS27480	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DEJ43_RS27525	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DEJ43_RS27530	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
DEJ43_RS27535	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DEJ43_RS27575	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DEJ43_RS27590	COG0514	ATP-dependent DNA helicase (RecQ)
DEJ43_RS27610	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
DEJ43_RS27615	COG1802	Transcriptional regulator
DEJ43_RS27620	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DEJ43_RS27635	COG0187	DNA topoisomerase II activity
DEJ43_RS27640	COG4585	Histidine kinase
DEJ43_RS27645	COG2197	response regulator
DEJ43_RS27655	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DEJ43_RS27665	COG3290	protein histidine kinase activity
DEJ43_RS27680	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DEJ43_RS27685	COG0612	Peptidase, M16
DEJ43_RS27700	COG1802	Transcriptional regulator
DEJ43_RS27705	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DEJ43_RS27725	COG1435	thymidine kinase activity
DEJ43_RS27735	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
DEJ43_RS27790	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
DEJ43_RS27800	COG0745	RESPONSE REGULATOR receiver
DEJ43_RS27805	COG2205	protein histidine kinase activity
DEJ43_RS27830	COG0756	dUTP diphosphatase activity
DEJ43_RS27840	COG4591	ABC-type transport system involved in lipoprotein release permease component
DEJ43_RS27840	COG1136	(ABC) transporter
DEJ43_RS27870	COG0569	domain protein
DEJ43_RS27875	COG0531	amino acid
DEJ43_RS27880	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DEJ43_RS27910	COG3845	ABC transporter
DEJ43_RS27950	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
DEJ43_RS27980	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
DEJ43_RS28000	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
DEJ43_RS28010	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
DEJ43_RS28015	COG1396	sequence-specific DNA binding
DEJ43_RS28015	COG3800	Transcriptional regulator
DEJ43_RS28025	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
DEJ43_RS28180	COG0714	Associated with various cellular activities
DEJ43_RS28335	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
DEJ43_RS28355	COG1074	ATP-dependent DNA helicase activity
DEJ43_RS28435	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DEJ43_RS28480	COG3851	Histidine kinase
DEJ43_RS28485	COG2197	response regulator
DEJ43_RS28520	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
DEJ43_RS28530	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
DEJ43_RS28555	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
DEJ43_RS28565	COG1132	(ABC) transporter
DEJ43_RS28580	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DEJ43_RS28580	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DEJ43_RS28605	COG0302	gtp cyclohydrolase
DEJ43_RS28625	COG0602	queuosine metabolic process
DEJ43_RS28630	COG0720	synthase
DEJ43_RS28635	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
DEJ43_RS28655	COG3387	PFAM Glycoside hydrolase 15-related
DEJ43_RS28770	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DEJ43_RS28820	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DEJ43_RS28850	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
DEJ43_RS28905	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS28910	COG3321	synthase
DEJ43_RS28910	COG0604	alcohol dehydrogenase
DEJ43_RS28920	COG1136	(ABC) transporter
DEJ43_RS28930	COG2197	response regulator
DEJ43_RS28935	COG3851	Histidine kinase
DEJ43_RS28950	COG2268	Band 7 protein
DEJ43_RS28980	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DEJ43_RS28990	COG1799	cell septum assembly
DEJ43_RS29020	COG2040	homocysteine
DEJ43_RS29030	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
DEJ43_RS29085	COG2235	arginine
DEJ43_RS29090	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DEJ43_RS29095	COG0531	amino acid
DEJ43_RS29105	COG1024	Enoyl-CoA hydratase
DEJ43_RS29155	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DEJ43_RS29165	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
DEJ43_RS29175	COG1653	transport
DEJ43_RS29180	COG1175	transmembrane transport
DEJ43_RS29185	COG0395	ABC-type sugar transport system, permease component
DEJ43_RS29190	COG1940	carbohydrate kinase activity
DEJ43_RS29195	COG4213	ABC transporter substrate-binding protein
DEJ43_RS29205	COG4214	carbohydrate transport
DEJ43_RS29210	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DEJ43_RS29215	COG0531	amino acid
DEJ43_RS29225	COG1024	Enoyl-CoA hydratase
DEJ43_RS29225	COG1250	3-hydroxyacyl-CoA dehydrogenase
DEJ43_RS29230	COG0183	Belongs to the thiolase family
DEJ43_RS29235	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
DEJ43_RS29250	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
DEJ43_RS29255	COG0446	pyridine nucleotide-disulphide oxidoreductase
DEJ43_RS29265	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
DEJ43_RS29270	COG3253	May function as heme-dependent peroxidase
DEJ43_RS29280	COG3220	belongs to the UPF0276 family
DEJ43_RS29350	COG0464	growth
DEJ43_RS29365	COG2197	response regulator
DEJ43_RS29400	COG1116	anion transmembrane transporter activity
DEJ43_RS29430	COG2326	polyphosphate kinase activity
DEJ43_RS29460	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
DEJ43_RS29465	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DEJ43_RS29470	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS29495	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS29520	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DEJ43_RS29525	COG0346	lactoylglutathione lyase activity
DEJ43_RS29535	COG0504	CTP synthase activity
DEJ43_RS29650	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
DEJ43_RS29665	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
DEJ43_RS29685	COG0529	Catalyzes the synthesis of activated sulfate
DEJ43_RS29690	COG0175	sulfate reduction
DEJ43_RS29715	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS29760	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
DEJ43_RS29775	COG1162	GTPase activity
DEJ43_RS29800	COG1404	Belongs to the peptidase S8 family
DEJ43_RS29810	COG0028	Belongs to the TPP enzyme family
DEJ43_RS29830	COG1802	Transcriptional regulator
DEJ43_RS29870	COG1529	Aldehyde oxidase and xanthine dehydrogenase
DEJ43_RS29875	COG2252	PERMEase
DEJ43_RS29890	COG1309	transcriptional regulator
DEJ43_RS29895	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS29900	COG0666	response to abiotic stimulus
DEJ43_RS29930	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
DEJ43_RS29955	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DEJ43_RS29960	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS29965	COG1309	transcriptional regulator
DEJ43_RS29970	COG0745	RESPONSE REGULATOR receiver
DEJ43_RS29975	COG4770	biotin carboxylase activity
DEJ43_RS29990	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DEJ43_RS30030	COG2814	Major facilitator Superfamily
DEJ43_RS30040	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
DEJ43_RS30065	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
DEJ43_RS30095	COG0431	NADPH-dependent FMN reductase
DEJ43_RS30100	COG2132	Multicopper oxidase
DEJ43_RS30150	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DEJ43_RS30180	COG0583	DNA-binding transcription factor activity
DEJ43_RS30195	COG0640	Transcriptional regulator
DEJ43_RS30210	COG0477	Major facilitator Superfamily
DEJ43_RS30230	COG3973	AAA domain
DEJ43_RS30280	COG0148	phosphopyruvate hydratase activity
DEJ43_RS30285	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DEJ43_RS30310	COG3585	molybdate ion transport
DEJ43_RS30325	COG0259	pyridoxamine-phosphate oxidase activity
DEJ43_RS30375	COG0297	glycogen (starch) synthase activity
DEJ43_RS30395	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DEJ43_RS30425	COG0598	Magnesium transport protein CorA
DEJ43_RS30440	COG2197	response regulator
DEJ43_RS30445	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DEJ43_RS30450	COG0318	PFAM AMP-dependent synthetase and ligase
DEJ43_RS30470	COG3960	tartronate-semialdehyde synthase activity
DEJ43_RS30490	COG0753	catalase activity
DEJ43_RS30495	COG2084	Dehydrogenase
DEJ43_RS30500	COG3622	Belongs to the hyi family
DEJ43_RS30520	COG2351	hydroxyisourate hydrolase activity
DEJ43_RS30530	COG2233	PERMEase
DEJ43_RS30540	COG2233	PERMEase
DEJ43_RS30565	COG2755	lipolytic protein G-D-S-L family
DEJ43_RS30570	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
DEJ43_RS30585	COG2197	response regulator
DEJ43_RS30590	COG4585	Histidine kinase
DEJ43_RS30600	COG1136	(ABC) transporter
DEJ43_RS30600	COG0577	efflux transmembrane transporter activity
DEJ43_RS30605	COG1414	Transcriptional regulator
DEJ43_RS30610	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
DEJ43_RS30615	COG4266	Belongs to the allantoicase family
DEJ43_RS30620	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS30645	COG4585	Histidine kinase
DEJ43_RS30650	COG2197	response regulator
DEJ43_RS30660	COG0673	inositol 2-dehydrogenase activity
DEJ43_RS30665	COG2188	Transcriptional regulator
DEJ43_RS30680	COG1129	ABC transporter
DEJ43_RS30685	COG1940	carbohydrate kinase activity
DEJ43_RS30710	COG0542	response to heat
DEJ43_RS30735	COG0477	Major facilitator Superfamily
DEJ43_RS30740	COG2409	Drug exporters of the RND superfamily
DEJ43_RS30760	COG0308	aminopeptidase N
DEJ43_RS30770	COG3629	intracellular signal transduction
DEJ43_RS30770	COG3903	Transcriptional regulator
DEJ43_RS30780	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DEJ43_RS30785	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
DEJ43_RS30800	COG1126	abc transporter atp-binding protein
DEJ43_RS30805	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DEJ43_RS30810	COG0765	amino acid transport
DEJ43_RS30815	COG0765	amino acid transport
DEJ43_RS30835	COG0405	Gamma-glutamyltransferase
DEJ43_RS30850	COG2318	DinB family
DEJ43_RS30860	COG1733	regulation of RNA biosynthetic process
DEJ43_RS30885	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DEJ43_RS30890	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
DEJ43_RS30915	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
DEJ43_RS30970	COG2814	Major facilitator Superfamily
DEJ43_RS30980	COG0154	amidase activity
DEJ43_RS30985	COG0318	PFAM AMP-dependent synthetase and ligase
DEJ43_RS31010	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DEJ43_RS31015	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
DEJ43_RS31020	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DEJ43_RS31025	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DEJ43_RS31050	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
DEJ43_RS31050	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DEJ43_RS31070	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DEJ43_RS31085	COG2124	cytochrome p450
DEJ43_RS31100	COG1181	Belongs to the D-alanine--D-alanine ligase family
DEJ43_RS31145	COG2197	response regulator
DEJ43_RS31150	COG4585	Histidine kinase
DEJ43_RS31180	COG0475	glutathione-regulated potassium exporter activity
DEJ43_RS31190	COG3629	intracellular signal transduction
DEJ43_RS31195	COG0583	DNA-binding transcription factor activity
DEJ43_RS31205	COG1136	(ABC) transporter
DEJ43_RS31220	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DEJ43_RS31225	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DEJ43_RS31245	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
DEJ43_RS31270	COG0134	indole-3-glycerol-phosphate synthase activity
DEJ43_RS31275	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DEJ43_RS31280	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DEJ43_RS31285	COG0512	Glutamine amidotransferase of anthranilate synthase
DEJ43_RS31295	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
DEJ43_RS31315	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DEJ43_RS31385	COG3629	intracellular signal transduction
DEJ43_RS31385	COG3903	Transcriptional regulator
DEJ43_RS31390	COG1136	(ABC) transporter
DEJ43_RS31405	COG2255	four-way junction helicase activity
DEJ43_RS31415	COG1953	Uracil, thiamine, allantoin
DEJ43_RS31435	COG0483	inositol monophosphate 1-phosphatase activity
DEJ43_RS31445	COG0009	L-threonylcarbamoyladenylate synthase
DEJ43_RS31450	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
DEJ43_RS31460	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DEJ43_RS31465	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
DEJ43_RS31480	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DEJ43_RS31485	COG1929	Belongs to the glycerate kinase type-1 family
DEJ43_RS31520	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DEJ43_RS31540	COG0688	phosphatidylethanolamine metabolic process
DEJ43_RS31545	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS31560	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
DEJ43_RS31560	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
DEJ43_RS31565	COG0604	alcohol dehydrogenase
DEJ43_RS31590	COG0596	Alpha beta hydrolase
DEJ43_RS31630	COG2362	D-Aminopeptidase
DEJ43_RS31635	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DEJ43_RS31640	COG4946	Tricorn protease homolog
DEJ43_RS31640	COG1506	peptidase
DEJ43_RS31640	COG0823	Involved in the tonB-independent uptake of proteins
DEJ43_RS31645	COG1619	proteins homologs of microcin C7 resistance protein MccF
DEJ43_RS31655	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
DEJ43_RS31690	COG0457	Tetratricopeptide repeat
DEJ43_RS31700	COG2226	methyltransferase
DEJ43_RS31745	COG0531	amino acid
DEJ43_RS31775	COG2154	pterin-4-alpha-carbinolamine dehydratase
DEJ43_RS31780	COG2226	methyltransferase
DEJ43_RS31785	COG0702	epimerase
DEJ43_RS31795	COG4106	trans-aconitate 2-methyltransferase activity
DEJ43_RS31805	COG0656	L-ascorbic acid biosynthetic process
DEJ43_RS31815	COG0583	DNA-binding transcription factor activity
DEJ43_RS31825	COG1335	isochorismatase
DEJ43_RS31835	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DEJ43_RS31855	COG1129	ABC transporter
DEJ43_RS31860	COG1172	Belongs to the binding-protein-dependent transport system permease family
DEJ43_RS31870	COG0673	inositol 2-dehydrogenase activity
DEJ43_RS31970	COG1486	melibiose metabolic process
DEJ43_RS31975	COG3012	SEC-C Motif Domain Protein
DEJ43_RS31990	COG1793	dna ligase
DEJ43_RS32000	COG1414	Transcriptional regulator
DEJ43_RS32030	COG0488	(ABC) transporter
DEJ43_RS32055	COG1515	deoxyribonuclease V activity
DEJ43_RS32065	COG3268	Saccharopine dehydrogenase
DEJ43_RS32070	COG1804	L-carnitine dehydratase bile acid-inducible protein F
DEJ43_RS32075	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS32080	COG0183	Belongs to the thiolase family
DEJ43_RS32085	COG1250	3-hydroxyacyl-CoA dehydrogenase
DEJ43_RS32085	COG1024	Enoyl-CoA hydratase
DEJ43_RS32100	COG3568	Endonuclease Exonuclease Phosphatase
DEJ43_RS32105	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
DEJ43_RS32120	COG2936	dipeptidyl-peptidase activity
DEJ43_RS32145	COG0488	(ABC) transporter
DEJ43_RS32150	COG2045	Belongs to the ComB family
DEJ43_RS32165	COG2183	response to ionizing radiation
DEJ43_RS32175	COG4977	sequence-specific DNA binding
DEJ43_RS32185	COG1024	Enoyl-CoA hydratase
DEJ43_RS32200	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
DEJ43_RS32245	COG1388	LysM domain
DEJ43_RS32245	COG1134	teichoic acid transport
DEJ43_RS32255	COG1562	ergosterol biosynthetic process
DEJ43_RS32265	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
DEJ43_RS32275	COG1657	PFAM Prenyltransferase squalene oxidase
DEJ43_RS32280	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DEJ43_RS32300	COG2365	Tyrosine phosphatase family
DEJ43_RS32310	COG2755	lipolytic protein G-D-S-L family
DEJ43_RS32325	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DEJ43_RS32350	COG2274	protein secretion by the type I secretion system
DEJ43_RS32390	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS32410	COG2197	response regulator
DEJ43_RS32415	COG1132	(ABC) transporter
DEJ43_RS32420	COG1132	(ABC) transporter
DEJ43_RS32430	COG0515	serine threonine protein kinase
DEJ43_RS32435	COG0300	oxidoreductase activity
DEJ43_RS32440	COG0515	serine threonine protein kinase
DEJ43_RS32470	COG0477	Major facilitator Superfamily
DEJ43_RS32475	COG4251	negative regulation of phosphorylation
DEJ43_RS32480	COG0745	RESPONSE REGULATOR receiver
DEJ43_RS32495	COG0583	DNA-binding transcription factor activity
DEJ43_RS32505	COG4106	trans-aconitate 2-methyltransferase activity
DEJ43_RS32530	COG1595	DNA-templated transcription, initiation
DEJ43_RS32535	COG3209	COG3209 Rhs family protein
DEJ43_RS32550	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
DEJ43_RS32585	COG0745	RESPONSE REGULATOR receiver
DEJ43_RS32590	COG2205	protein histidine kinase activity
DEJ43_RS32605	COG0640	Transcriptional regulator
DEJ43_RS32625	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DEJ43_RS32630	COG3619	membrane
DEJ43_RS32645	COG0514	ATP-dependent DNA helicase (RecQ)
DEJ43_RS32655	COG0542	response to heat
DEJ43_RS32660	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
DEJ43_RS32665	COG2837	iron assimilation
DEJ43_RS32680	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DEJ43_RS32690	COG3591	Belongs to the peptidase S1B family
DEJ43_RS32710	COG1404	Belongs to the peptidase S8 family
DEJ43_RS32750	COG3189	MarR family transcriptional regulator
DEJ43_RS32780	COG0494	nUDIX hydrolase
DEJ43_RS32790	COG1349	DNA-binding transcription factor activity
DEJ43_RS32800	COG0789	Transcriptional regulator
DEJ43_RS32815	COG2755	lipolytic protein G-D-S-L family
DEJ43_RS32820	COG1262	PFAM Formylglycine-generating sulfatase enzyme
DEJ43_RS32825	COG2814	Major facilitator Superfamily
DEJ43_RS32830	COG3119	arylsulfatase activity
DEJ43_RS32895	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
DEJ43_RS32910	COG1733	regulation of RNA biosynthetic process
DEJ43_RS32950	COG2409	Drug exporters of the RND superfamily
DEJ43_RS32960	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DEJ43_RS32965	COG0584	glycerophosphoryl diester phosphodiesterase
DEJ43_RS32990	COG0395	ABC-type sugar transport system, permease component
DEJ43_RS32995	COG1175	transmembrane transport
DEJ43_RS33010	COG5297	Belongs to the glycosyl hydrolase family 6
DEJ43_RS33020	COG5297	Belongs to the glycosyl hydrolase family 6
DEJ43_RS33020	COG4733	cellulase activity
DEJ43_RS33035	COG1175	transmembrane transport
DEJ43_RS33040	COG0395	ABC-type sugar transport system, permease component
DEJ43_RS33080	COG1595	DNA-templated transcription, initiation
DEJ43_RS33095	COG1695	Transcriptional regulator
DEJ43_RS33105	COG0432	Pfam Uncharacterised protein family UPF0047
DEJ43_RS33115	COG3866	Pectate lyase
DEJ43_RS33120	COG2755	lipolytic protein G-D-S-L family
DEJ43_RS33150	COG0395	ABC-type sugar transport system, permease component
DEJ43_RS33165	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DEJ43_RS33170	COG1802	Transcriptional regulator
DEJ43_RS33175	COG1501	Belongs to the glycosyl hydrolase 31 family
DEJ43_RS33190	COG1472	Belongs to the glycosyl hydrolase 3 family
DEJ43_RS33205	COG0395	ABC-type sugar transport system, permease component
DEJ43_RS33220	COG1609	Transcriptional regulator
DEJ43_RS33240	COG1414	Transcriptional regulator
DEJ43_RS33245	COG3386	PFAM SMP-30 Gluconolaconase
DEJ43_RS33265	COG1175	transmembrane transport
DEJ43_RS33270	COG0395	ABC-type sugar transport system, permease component
DEJ43_RS33280	COG1556	Lactate utilization protein
DEJ43_RS33285	COG1139	Iron-sulfur cluster binding protein
DEJ43_RS33290	COG0247	lactate metabolic process
DEJ43_RS33295	COG1070	Carbohydrate kinase
DEJ43_RS33300	COG3347	Dehydrogenase
DEJ43_RS33300	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS33310	COG3254	rhamnose metabolic process
DEJ43_RS33315	COG1609	Transcriptional regulator
DEJ43_RS33350	COG1940	carbohydrate kinase activity
DEJ43_RS33370	COG1136	(ABC) transporter
DEJ43_RS33420	COG2226	methyltransferase
DEJ43_RS33425	COG2124	cytochrome p450
DEJ43_RS33440	COG3458	cephalosporin-C deacetylase activity
DEJ43_RS33470	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DEJ43_RS33475	COG0028	Belongs to the TPP enzyme family
DEJ43_RS33480	COG1335	isochorismatase
DEJ43_RS33490	COG1573	uracil-dna glycosylase
DEJ43_RS33525	COG0546	phosphoglycolate phosphatase activity
DEJ43_RS33540	COG2890	protein-(glutamine-N5) methyltransferase activity
DEJ43_RS33560	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DEJ43_RS33565	COG0227	Belongs to the bacterial ribosomal protein bL28 family
DEJ43_RS33570	COG0254	rRNA binding
DEJ43_RS33580	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DEJ43_RS33585	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
DEJ43_RS33615	COG1879	ABC-type sugar transport system periplasmic component
DEJ43_RS33625	COG1172	Belongs to the binding-protein-dependent transport system permease family
DEJ43_RS33630	COG1172	Belongs to the binding-protein-dependent transport system permease family
DEJ43_RS33640	COG4214	carbohydrate transport
DEJ43_RS33645	COG1129	ABC transporter
DEJ43_RS33655	COG1609	Transcriptional regulator
DEJ43_RS33665	COG2160	L-arabinose isomerase activity
DEJ43_RS33680	COG3507	Belongs to the glycosyl hydrolase 43 family
DEJ43_RS33685	COG1472	Belongs to the glycosyl hydrolase 3 family
DEJ43_RS33690	COG1609	Transcriptional regulator
DEJ43_RS33700	COG1175	transmembrane transport
DEJ43_RS33705	COG0395	ABC-type sugar transport system, permease component
DEJ43_RS33720	COG0673	inositol 2-dehydrogenase activity
DEJ43_RS33735	COG3693	PFAM glycoside hydrolase, family 10
DEJ43_RS33745	COG3693	PFAM glycoside hydrolase, family 10
DEJ43_RS33760	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DEJ43_RS33765	COG1522	sequence-specific DNA binding
DEJ43_RS33800	COG3119	arylsulfatase activity
DEJ43_RS33805	COG1262	PFAM Formylglycine-generating sulfatase enzyme
DEJ43_RS33815	COG0431	NADPH-dependent FMN reductase
DEJ43_RS33835	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DEJ43_RS33855	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DEJ43_RS33870	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS33875	COG1028	Short-chain dehydrogenase reductase Sdr
DEJ43_RS33880	COG0318	PFAM AMP-dependent synthetase and ligase
DEJ43_RS33885	COG0318	PFAM AMP-dependent synthetase and ligase
DEJ43_RS33890	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
DEJ43_RS33900	COG1012	belongs to the aldehyde dehydrogenase family
DEJ43_RS33910	COG2267	carboxylic ester hydrolase activity
DEJ43_RS33915	COG2072	flavoprotein involved in K transport
DEJ43_RS33925	COG3804	dihydrodipicolinate reductase
DEJ43_RS33960	COG0477	Major facilitator Superfamily
DEJ43_RS33980	COG2867	negative regulation of translational initiation
DEJ43_RS33985	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DEJ43_RS34025	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
DEJ43_RS34080	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
DEJ43_RS34095	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DEJ43_RS34100	COG3275	phosphorelay sensor kinase activity
DEJ43_RS34175	COG0745	RESPONSE REGULATOR receiver
DEJ43_RS34180	COG2205	protein histidine kinase activity
DEJ43_RS34195	COG1053	succinate dehydrogenase
DEJ43_RS34200	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
DEJ43_RS34220	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DEJ43_RS34225	COG2080	2 iron, 2 sulfur cluster binding
DEJ43_RS34230	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
DEJ43_RS34235	COG1529	Aldehyde oxidase and xanthine dehydrogenase
DEJ43_RS34305	COG1819	glycosyl
DEJ43_RS34325	COG2182	Extracellular solute-binding protein
DEJ43_RS34340	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
DEJ43_RS34345	COG0121	glutamine amidotransferase
DEJ43_RS34350	COG1262	PFAM Formylglycine-generating sulfatase enzyme
DEJ43_RS34380	COG2268	Band 7 protein
DEJ43_RS34390	COG0596	Alpha beta hydrolase
DEJ43_RS34400	COG1609	Transcriptional regulator
DEJ43_RS34410	COG0183	Belongs to the thiolase family
DEJ43_RS34415	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DEJ43_RS34465	COG1482	cell wall glycoprotein biosynthetic process
DEJ43_RS34490	COG1175	transmembrane transport
DEJ43_RS34495	COG3833	ABC-type maltose transport systems, permease component
DEJ43_RS34515	COG1132	(ABC) transporter
DEJ43_RS34540	COG1335	isochorismatase
DEJ43_RS34545	COG2259	Doxx family
DEJ43_RS34550	COG0783	Belongs to the Dps family
DEJ43_RS34555	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DEJ43_RS34585	COG1653	transport
DEJ43_RS34590	COG1175	transmembrane transport
DEJ43_RS34595	COG0395	ABC-type sugar transport system, permease component
DEJ43_RS34615	COG2508	Transcriptional regulator
DEJ43_RS34665	COG0693	protein deglycase activity
DEJ43_RS34675	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
DEJ43_RS34765	COG1126	abc transporter atp-binding protein
DEJ43_RS34770	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DEJ43_RS34775	COG0765	amino acid transport
DEJ43_RS34780	COG0765	amino acid transport
DEJ43_RS34785	COG2409	Drug exporters of the RND superfamily
DEJ43_RS34790	COG1846	Transcriptional regulator
DEJ43_RS34795	COG0702	epimerase
DEJ43_RS34830	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
DEJ43_RS34840	COG1174	glycine betaine transport
DEJ43_RS34845	COG1174	glycine betaine transport
DEJ43_RS34865	COG1609	Transcriptional regulator
DEJ43_RS34885	COG3634	alkyl hydroperoxide reductase activity
DEJ43_RS34900	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS34905	COG1960	acyl-CoA dehydrogenase activity
DEJ43_RS34920	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DEJ43_RS34925	COG0444	Belongs to the ABC transporter superfamily
DEJ43_RS35000	COG0366	Alpha amylase catalytic
DEJ43_RS35000	COG1874	Beta-galactosidase
DEJ43_RS35065	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
DEJ43_RS35075	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DEJ43_RS35080	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DEJ43_RS35090	COG2188	Transcriptional regulator
DEJ43_RS35130	COG0395	ABC-type sugar transport system, permease component
DEJ43_RS35160	COG0736	holo-[acyl-carrier-protein] synthase activity
DEJ43_RS35165	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DEJ43_RS35175	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DEJ43_RS35215	COG2814	Major facilitator Superfamily
DEJ43_RS35225	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DEJ43_RS35250	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DEJ43_RS35255	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DEJ43_RS35265	COG1309	transcriptional regulator
DEJ43_RS35270	COG1132	(ABC) transporter
DEJ43_RS35285	COG3486	L-lysine 6-monooxygenase (NADPH) activity
DEJ43_RS35290	COG4607	ABC-type enterochelin transport system periplasmic component
DEJ43_RS35295	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DEJ43_RS35305	COG1132	(ABC) transporter
DEJ43_RS35310	COG1132	(ABC) transporter
DEJ43_RS35315	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DEJ43_RS35320	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DEJ43_RS35325	COG1120	ATPase activity
DEJ43_RS35340	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DEJ43_RS35345	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
DEJ43_RS35350	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
DEJ43_RS35355	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
DEJ43_RS35405	COG0402	S-adenosylhomocysteine deaminase activity
DEJ43_RS35410	COG1802	Transcriptional regulator
DEJ43_RS35415	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DEJ43_RS35420	COG4214	carbohydrate transport
DEJ43_RS35430	COG4213	ABC transporter substrate-binding protein
DEJ43_RS35440	COG0243	molybdopterin cofactor binding
DEJ43_RS35485	COG0747	negative chemotaxis
DEJ43_RS35495	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DEJ43_RS35500	COG0444	Belongs to the ABC transporter superfamily
DEJ43_RS35510	COG2957	Belongs to the agmatine deiminase family
DEJ43_RS35535	COG2235	arginine
DEJ43_RS35545	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DEJ43_RS35560	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DEJ43_RS35590	COG0673	inositol 2-dehydrogenase activity
DEJ43_RS35595	COG2340	Cysteine-rich secretory protein family
DEJ43_RS35605	COG3903	Transcriptional regulator
DEJ43_RS35605	COG3629	intracellular signal transduction
DEJ43_RS35650	COG3795	YCII-related domain
DEJ43_RS35655	COG4941	Belongs to the sigma-70 factor family
DEJ43_RS35665	COG3938	Belongs to the proline racemase family
DEJ43_RS35675	COG4608	Belongs to the ABC transporter superfamily
DEJ43_RS35685	COG0601	transmembrane transport
DEJ43_RS35690	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DEJ43_RS35720	COG3938	Belongs to the proline racemase family
DEJ43_RS35725	COG1012	belongs to the aldehyde dehydrogenase family
DEJ43_RS35730	COG1802	Transcriptional regulator
DEJ43_RS35735	COG2015	COG2015, Alkyl sulfatase and related hydrolases
DEJ43_RS35765	COG1609	Transcriptional regulator
DEJ43_RS35770	COG0747	negative chemotaxis
DEJ43_RS35780	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DEJ43_RS35790	COG4172	Belongs to the ABC transporter superfamily
DEJ43_RS35815	COG2366	antibiotic biosynthetic process
DEJ43_RS35835	COG3903	Transcriptional regulator
DEJ43_RS35835	COG3629	intracellular signal transduction
DEJ43_RS35870	COG1686	Belongs to the peptidase S11 family
DEJ43_RS35875	COG2205	protein histidine kinase activity
DEJ43_RS35880	COG0745	RESPONSE REGULATOR receiver
DEJ43_RS35900	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
DEJ43_RS35915	COG1216	Glycosyl transferase, family 2
DEJ43_RS35925	COG4310	Domain of unknown function (DUF2172)
DEJ43_RS35940	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
DEJ43_RS35950	COG0438	transferase activity, transferring glycosyl groups
DEJ43_RS35995	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
DEJ43_RS36000	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
DEJ43_RS36115	COG1309	transcriptional regulator
DEJ43_RS36120	COG0318	PFAM AMP-dependent synthetase and ligase
DEJ43_RS36145	COG0277	FAD linked oxidase domain protein
DEJ43_RS36150	COG1597	lipid kinase activity
DEJ43_RS36160	COG0726	polysaccharide deacetylase
DEJ43_RS36180	COG0406	alpha-ribazole phosphatase activity
DEJ43_RS36185	COG1309	transcriptional regulator
DEJ43_RS36190	COG0277	FAD linked oxidase domain protein
DEJ43_RS36210	COG1755	Isoprenylcysteine carboxyl methyltransferase
DEJ43_RS36215	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DEJ43_RS36230	COG2890	protein-(glutamine-N5) methyltransferase activity
DEJ43_RS36240	COG0723	plastoquinol--plastocyanin reductase activity
DEJ43_RS36240	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DEJ43_RS36250	COG0297	glycogen (starch) synthase activity
DEJ43_RS36270	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
DEJ43_RS36285	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DEJ43_RS36290	COG3239	Fatty acid desaturase
DEJ43_RS36315	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DEJ43_RS36360	COG2018	Roadblock/LC7 domain
DEJ43_RS36370	COG1793	dna ligase
DEJ43_RS36380	COG0726	polysaccharide deacetylase
DEJ43_RS36425	COG1376	ErfK ybiS ycfS ynhG family protein
DEJ43_RS36440	COG0730	response to heat
DEJ43_RS36450	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DEJ43_RS36460	COG2814	Major facilitator Superfamily
DEJ43_RS36470	COG1473	amidohydrolase
DEJ43_RS36485	COG0477	Major facilitator Superfamily
DEJ43_RS36505	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DEJ43_RS36520	COG0542	response to heat
DEJ43_RS36545	COG4585	Histidine kinase
DEJ43_RS36550	COG2197	response regulator
DEJ43_RS36555	COG1051	belongs to the nudix hydrolase family
DEJ43_RS36580	COG0702	epimerase
DEJ43_RS36585	COG0254	rRNA binding
DEJ43_RS36615	COG5412	phage tail tape measure protein
DEJ43_RS36615	COG3953	SLT domain
DEJ43_RS36625	COG3511	phospholipase C
DEJ43_RS36630	COG1349	DNA-binding transcription factor activity
DEJ43_RS36635	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DEJ43_RS36655	COG0596	Alpha beta hydrolase
DEJ43_RS36700	COG4977	sequence-specific DNA binding
DEJ43_RS36725	COG1695	Transcriptional regulator
DEJ43_RS36730	COG1472	Belongs to the glycosyl hydrolase 3 family
DEJ43_RS36755	COG1653	transport
DEJ43_RS36760	COG1175	transmembrane transport
DEJ43_RS36765	COG0395	ABC-type sugar transport system, permease component
DEJ43_RS36770	COG0366	Alpha amylase catalytic
DEJ43_RS36775	COG4106	trans-aconitate 2-methyltransferase activity
DEJ43_RS36810	COG0395	ABC-type sugar transport system, permease component
DEJ43_RS36815	COG1175	transmembrane transport
DEJ43_RS36825	COG2188	Transcriptional regulator
DEJ43_RS36830	COG2188	Transcriptional regulator
DEJ43_RS36845	COG1136	(ABC) transporter
DEJ43_RS36845	COG0577	efflux transmembrane transporter activity
DEJ43_RS36850	COG1136	(ABC) transporter
DEJ43_RS36850	COG0577	efflux transmembrane transporter activity
DEJ43_RS36865	COG0745	RESPONSE REGULATOR receiver
DEJ43_RS36870	COG0642	Histidine kinase
DEJ43_RS36880	COG3209	COG3209 Rhs family protein
DEJ43_RS36890	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DEJ43_RS36900	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
DEJ43_RS36935	COG0714	Associated with various cellular activities
DEJ43_RS36965	COG2226	methyltransferase
DEJ43_RS36980	COG1846	Transcriptional regulator
DEJ43_RS37010	COG0667	Aldo Keto reductase
DEJ43_RS37050	COG3655	Transcriptional regulator
DEJ43_RS37155	COG1418	mRNA catabolic process
DEJ43_RS37170	COG1309	transcriptional regulator
DEJ43_RS37185	COG0110	maltose O-acetyltransferase activity
DEJ43_RS37190	COG1309	transcriptional regulator
DEJ43_RS37195	COG1020	D-alanine [D-alanyl carrier protein] ligase activity