SROS_RS00005	SM00382	ATPases associated with a variety of cellular activities
SROS_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
SROS_RS00010	SM00480	DNA polymerase III beta subunit
SROS_RS00020	SM01350	SROS_RS00020
SROS_RS00035	SM00387	Histidine kinase-like ATPases
SROS_RS00035	SM00433	TopoisomeraseII
SROS_RS00040	SM00434	DNA Topoisomerase IV
SROS_RS00140	SM00327	von Willebrand factor (vWF) type A domain
SROS_RS00155	SM00382	ATPases associated with a variety of cellular activities
SROS_RS00160	SM00028	Tetratricopeptide repeats
SROS_RS00200	SM00382	ATPases associated with a variety of cellular activities
SROS_RS00250	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS00350	SM00387	Histidine kinase-like ATPases
SROS_RS00355	SM00421	helix_turn_helix, Lux Regulon
SROS_RS00355	SM00448	cheY-homologous receiver domain
SROS_RS00390	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS00415	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS00440	SM00382	ATPases associated with a variety of cellular activities
SROS_RS00445	SM00421	helix_turn_helix, Lux Regulon
SROS_RS00445	SM00448	cheY-homologous receiver domain
SROS_RS00500	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS00500	SM00387	Histidine kinase-like ATPases
SROS_RS00500	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS00505	SM00448	cheY-homologous receiver domain
SROS_RS00505	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS00545	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS00545	SM00740	SROS_RS00545
SROS_RS00550	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS00565	SM00331	Sigma factor PP2C-like phosphatases
SROS_RS00565	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SROS_RS00570	SM00240	Forkhead associated domain
SROS_RS00575	SM00240	Forkhead associated domain
SROS_RS00585	SM00116	Domain in cystathionine beta-synthase and other proteins.
SROS_RS00590	SM00116	Domain in cystathionine beta-synthase and other proteins.
SROS_RS00590	SM01091	Transporter associated domain
SROS_RS00615	SM00450	Rhodanese Homology Domain
SROS_RS00630	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SROS_RS00630	SM00091	PAS domain
SROS_RS00630	SM00387	Histidine kinase-like ATPases
SROS_RS00630	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS00650	SM00448	cheY-homologous receiver domain
SROS_RS00650	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS00655	SM00387	Histidine kinase-like ATPases
SROS_RS00655	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS00700	SM00357	Cold shock protein domain
SROS_RS00715	SM00829	Enoylreductase
SROS_RS00755	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS00755	SM00866	SROS_RS00755
SROS_RS00770	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS00770	SM00866	SROS_RS00770
SROS_RS00795	SM00248	ankyrin repeats
SROS_RS00825	SM00867	YceI-like domain 
SROS_RS00860	SM00344	helix_turn_helix ASNC type
SROS_RS00925	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS00930	SM00867	YceI-like domain 
SROS_RS00955	SM00421	helix_turn_helix, Lux Regulon
SROS_RS00955	SM00448	cheY-homologous receiver domain
SROS_RS00960	SM00387	Histidine kinase-like ATPases
SROS_RS01015	SM00382	ATPases associated with a variety of cellular activities
SROS_RS01055	SM00422	helix_turn_helix, mercury resistance
SROS_RS01055	SM00871	Bacterial transcription activator, effector binding domain
SROS_RS01090	SM00421	helix_turn_helix, Lux Regulon
SROS_RS01090	SM00448	cheY-homologous receiver domain
SROS_RS01165	SM00331	Sigma factor PP2C-like phosphatases
SROS_RS01190	SM00564	beta-propeller repeat
SROS_RS01215	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS01215	SM00387	Histidine kinase-like ATPases
SROS_RS01215	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS01220	SM00448	cheY-homologous receiver domain
SROS_RS01220	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS01255	SM00382	ATPases associated with a variety of cellular activities
SROS_RS01270	SM00506	Appr-1"-p processing enzyme
SROS_RS01275	SM00382	ATPases associated with a variety of cellular activities
SROS_RS01285	SM00387	Histidine kinase-like ATPases
SROS_RS01290	SM00421	helix_turn_helix, Lux Regulon
SROS_RS01290	SM00448	cheY-homologous receiver domain
SROS_RS01300	SM00421	helix_turn_helix, Lux Regulon
SROS_RS01300	SM00448	cheY-homologous receiver domain
SROS_RS01320	SM00495	Chitin-binding domain type 3
SROS_RS01400	SM00354	helix_turn _helix lactose operon repressor
SROS_RS01420	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS01420	SM00387	Histidine kinase-like ATPases
SROS_RS01420	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS01425	SM00448	cheY-homologous receiver domain
SROS_RS01425	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS01440	SM00382	ATPases associated with a variety of cellular activities
SROS_RS01475	SM00320	WD40 repeats
SROS_RS01580	SM00870	SROS_RS01580
SROS_RS01645	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS01675	SM00387	Histidine kinase-like ATPases
SROS_RS01680	SM00960	Roadblock/LC7 domain
SROS_RS01700	SM00960	Roadblock/LC7 domain
SROS_RS01730	SM00244	prohibitin homologues
SROS_RS01735	SM00487	DEAD-like helicases superfamily
SROS_RS01735	SM00490	helicase superfamily c-terminal domain
SROS_RS01745	SM00829	Enoylreductase
SROS_RS01765	SM00984	UDP binding domain
SROS_RS01815	SM01209	SROS_RS01815
SROS_RS01815	SM01210	SROS_RS01815
SROS_RS01830	SM00788	Adenylosuccinate synthetase
SROS_RS01870	SM00382	ATPases associated with a variety of cellular activities
SROS_RS01880	SM00448	cheY-homologous receiver domain
SROS_RS01885	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SROS_RS01885	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS01885	SM00387	Histidine kinase-like ATPases
SROS_RS01885	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS01885	SM00448	cheY-homologous receiver domain
SROS_RS01890	SM00331	Sigma factor PP2C-like phosphatases
SROS_RS01910	SM00382	ATPases associated with a variety of cellular activities
SROS_RS01915	SM00849	Metallo-beta-lactamase superfamily
SROS_RS01925	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS01985	SM00382	ATPases associated with a variety of cellular activities
SROS_RS01995	SM00354	helix_turn _helix lactose operon repressor
SROS_RS02010	SM01007	Class II Aldolase and Adducin N-terminal domain
SROS_RS02040	SM00387	Histidine kinase-like ATPases
SROS_RS02040	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS02045	SM00448	cheY-homologous receiver domain
SROS_RS02045	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS02140	SM00822	SROS_RS02140
SROS_RS02195	SM00849	Metallo-beta-lactamase superfamily
SROS_RS02200	SM00100	Cyclic nucleotide-monophosphate binding domain
SROS_RS02200	SM00419	helix_turn_helix, cAMP Regulatory protein
SROS_RS02205	SM00478	endonuclease III
SROS_RS02205	SM00525	SROS_RS02205
SROS_RS02275	SM00422	helix_turn_helix, mercury resistance
SROS_RS02315	SM00487	DEAD-like helicases superfamily
SROS_RS02315	SM00490	helicase superfamily c-terminal domain
SROS_RS02335	SM00855	Phosphoglycerate mutase family
SROS_RS02355	SM00563	Phosphate acyltransferases
SROS_RS02360	SM00421	helix_turn_helix, Lux Regulon
SROS_RS02360	SM00448	cheY-homologous receiver domain
SROS_RS02380	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SROS_RS02380	SM00387	Histidine kinase-like ATPases
SROS_RS02385	SM00421	helix_turn_helix, Lux Regulon
SROS_RS02385	SM00448	cheY-homologous receiver domain
SROS_RS02395	SM00382	ATPases associated with a variety of cellular activities
SROS_RS02415	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SROS_RS02420	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SROS_RS02430	SM01060	SROS_RS02430
SROS_RS02440	SM00854	Bacterial capsule synthesis protein PGA_cap
SROS_RS02445	SM00822	SROS_RS02445
SROS_RS02470	SM00382	ATPases associated with a variety of cellular activities
SROS_RS02470	SM01086	C-terminal, D2-small domain, of ClpB protein
SROS_RS02475	SM00422	helix_turn_helix, mercury resistance
SROS_RS02480	SM00271	DnaJ molecular chaperone homology domain
SROS_RS02545	SM00563	Phosphate acyltransferases
SROS_RS02580	SM00881	CoA binding domain
SROS_RS02600	SM01004	Delta-aminolevulinic acid dehydratase
SROS_RS02605	SM00943	Bifunctional DNA primase/polymerase, N-terminal
SROS_RS02610	SM00421	helix_turn_helix, Lux Regulon
SROS_RS02610	SM00448	cheY-homologous receiver domain
SROS_RS02615	SM00387	Histidine kinase-like ATPases
SROS_RS02620	SM00387	Histidine kinase-like ATPases
SROS_RS02700	SM00855	Phosphoglycerate mutase family
SROS_RS02785	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
SROS_RS02790	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SROS_RS02790	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
SROS_RS02865	SM00829	Enoylreductase
SROS_RS02875	SM00421	helix_turn_helix, Lux Regulon
SROS_RS02875	SM00448	cheY-homologous receiver domain
SROS_RS02880	SM00387	Histidine kinase-like ATPases
SROS_RS02925	SM00091	PAS domain
SROS_RS02925	SM00331	Sigma factor PP2C-like phosphatases
SROS_RS02955	SM00387	Histidine kinase-like ATPases
SROS_RS02970	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS02970	SM00895	SROS_RS02970
SROS_RS03110	SM00984	UDP binding domain
SROS_RS03335	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS03335	SM00866	SROS_RS03335
SROS_RS03420	SM00422	helix_turn_helix, mercury resistance
SROS_RS03440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS03440	SM00866	SROS_RS03440
SROS_RS03495	SM00028	Tetratricopeptide repeats
SROS_RS03505	SM01400	SROS_RS03505
SROS_RS03515	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS03515	SM01043	Bacterial transcriptional activator domain
SROS_RS03525	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
SROS_RS03625	SM00382	ATPases associated with a variety of cellular activities
SROS_RS03710	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS03715	SM00028	Tetratricopeptide repeats
SROS_RS03715	SM00382	ATPases associated with a variety of cellular activities
SROS_RS03715	SM00421	helix_turn_helix, Lux Regulon
SROS_RS03730	SM01133	SROS_RS03730
SROS_RS03755	SM00244	prohibitin homologues
SROS_RS03765	SM00382	ATPases associated with a variety of cellular activities
SROS_RS03765	SM00487	DEAD-like helicases superfamily
SROS_RS03765	SM00490	helicase superfamily c-terminal domain
SROS_RS03765	SM00847	Helicase associated domain (HA2)  Add an annotation
SROS_RS03905	SM00231	Coagulation factor 5/8 C-terminal domain, discoidin domain
SROS_RS03905	SM00710	Parallel beta-helix repeats
SROS_RS03920	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SROS_RS03940	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS03955	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS03960	SM00382	ATPases associated with a variety of cellular activities
SROS_RS03970	SM00387	Histidine kinase-like ATPases
SROS_RS03975	SM00421	helix_turn_helix, Lux Regulon
SROS_RS03975	SM00448	cheY-homologous receiver domain
SROS_RS03985	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS03985	SM01043	Bacterial transcriptional activator domain
SROS_RS04015	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS04015	SM01043	Bacterial transcriptional activator domain
SROS_RS04025	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SROS_RS04025	SM00245	tail specific protease
SROS_RS04030	SM00448	cheY-homologous receiver domain
SROS_RS04030	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS04035	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS04035	SM00387	Histidine kinase-like ATPases
SROS_RS04035	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS04095	SM00382	ATPases associated with a variety of cellular activities
SROS_RS04175	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS04225	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS04260	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS04295	SM00450	Rhodanese Homology Domain
SROS_RS04345	SM00318	Staphylococcal nuclease homologues
SROS_RS04400	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS04410	SM00248	ankyrin repeats
SROS_RS04425	SM00421	helix_turn_helix, Lux Regulon
SROS_RS04425	SM00448	cheY-homologous receiver domain
SROS_RS04445	SM00060	Fibronectin type 3 domain
SROS_RS04445	SM00633	Glycosyl hydrolase family 10
SROS_RS04445	SM00637	SROS_RS04445
SROS_RS04450	SM00060	Fibronectin type 3 domain
SROS_RS04450	SM00637	SROS_RS04450
SROS_RS04455	SM00060	Fibronectin type 3 domain
SROS_RS04455	SM00637	SROS_RS04455
SROS_RS04455	SM01067	Cellulose binding domain
SROS_RS04460	SM00637	SROS_RS04460
SROS_RS04465	SM00354	helix_turn _helix lactose operon repressor
SROS_RS04470	SM00642	Alpha-amylase domain
SROS_RS04500	SM00354	helix_turn _helix lactose operon repressor
SROS_RS04525	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS04540	SM00506	Appr-1"-p processing enzyme
SROS_RS04570	SM00855	Phosphoglycerate mutase family
SROS_RS04580	SM00387	Histidine kinase-like ATPases
SROS_RS04580	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS04585	SM00448	cheY-homologous receiver domain
SROS_RS04585	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS04595	SM01058	CarD-like/TRCF domain
SROS_RS04630	SM00840	SROS_RS04630
SROS_RS04635	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SROS_RS04665	SM00829	Enoylreductase
SROS_RS04675	SM00994	ClpX C4-type zinc finger
SROS_RS04690	SM00458	Ricin-type beta-trefoil
SROS_RS04735	SM00364	Leucine-rich repeats, bacterial type
SROS_RS04735	SM00365	Leucine-rich repeat, SDS22-like subfamily
SROS_RS04735	SM00369	Leucine-rich repeats, typical (most populated) subfamily
SROS_RS04755	SM00382	ATPases associated with a variety of cellular activities
SROS_RS04785	SM00866	SROS_RS04785
SROS_RS04795	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS04820	SM00529	Helix-turn-helix diphteria tox regulatory element
SROS_RS04825	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SROS_RS04825	SM00331	Sigma factor PP2C-like phosphatases
SROS_RS04890	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS04890	SM01043	Bacterial transcriptional activator domain
SROS_RS04945	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS04945	SM01043	Bacterial transcriptional activator domain
SROS_RS05080	SM00382	ATPases associated with a variety of cellular activities
SROS_RS05100	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SROS_RS05105	SM00649	Ribosomal protein L11/L12
SROS_RS05130	SM00382	ATPases associated with a variety of cellular activities
SROS_RS05160	SM00663	RNA polymerase I subunit A N-terminus
SROS_RS05175	SM00838	Elongation factor G C-terminus
SROS_RS05175	SM00889	Elongation factor G, domain IV
SROS_RS05185	SM01403	SROS_RS05185
SROS_RS05205	SM01382	SROS_RS05205
SROS_RS05205	SM01383	SROS_RS05205
SROS_RS05220	SM00322	K homology RNA-binding domain
SROS_RS05240	SM01374	SROS_RS05240
SROS_RS05245	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SROS_RS05325	SM00316	Ribosomal protein S1-like RNA-binding domain
SROS_RS05345	SM00363	S4 RNA-binding domain
SROS_RS05345	SM01390	SROS_RS05345
SROS_RS05350	SM00662	RNA polymerases D
SROS_RS05395	SM00060	Fibronectin type 3 domain
SROS_RS05420	SM00382	ATPases associated with a variety of cellular activities
SROS_RS05430	SM00382	ATPases associated with a variety of cellular activities
SROS_RS05460	SM01005	Alanine racemase, C-terminal domain
SROS_RS05505	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS05525	SM00883	Chaperonin 10 Kd subunit
SROS_RS05550	SM00421	helix_turn_helix, Lux Regulon
SROS_RS05555	SM00116	Domain in cystathionine beta-synthase and other proteins.
SROS_RS05555	SM01240	SROS_RS05555
SROS_RS05560	SM01240	SROS_RS05560
SROS_RS05590	SM00420	helix_turn_helix, Deoxyribose operon repressor
SROS_RS05590	SM01134	SROS_RS05590
SROS_RS05595	SM00382	ATPases associated with a variety of cellular activities
SROS_RS05665	SM00822	SROS_RS05665
SROS_RS05775	SM00858	SROS_RS05775
SROS_RS05810	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS05810	SM01043	Bacterial transcriptional activator domain
SROS_RS05815	SM00458	Ricin-type beta-trefoil
SROS_RS05845	SM01092	CO dehydrogenase flavoprotein C-terminal domain
SROS_RS05850	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SROS_RS05900	SM00421	helix_turn_helix, Lux Regulon
SROS_RS05900	SM00448	cheY-homologous receiver domain
SROS_RS05955	SM00060	Fibronectin type 3 domain
SROS_RS05975	SM00881	CoA binding domain
SROS_RS05995	SM00798	AICARFT/IMPCHase bienzyme
SROS_RS05995	SM00851	MGS-like domain
SROS_RS06005	SM00240	Forkhead associated domain
SROS_RS06020	SM01329	SROS_RS06020
SROS_RS06060	SM00116	Domain in cystathionine beta-synthase and other proteins.
SROS_RS06060	SM01091	Transporter associated domain
SROS_RS06100	SM00382	ATPases associated with a variety of cellular activities
SROS_RS06120	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
SROS_RS06125	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS06200	SM00422	helix_turn_helix, mercury resistance
SROS_RS06225	SM00606	Cellulose Binding Domain Type IV
SROS_RS06225	SM01217	SROS_RS06225
SROS_RS06230	SM00354	helix_turn _helix lactose operon repressor
SROS_RS06240	SM00878	Biotin carboxylase C-terminal domain
SROS_RS06255	SM00382	ATPases associated with a variety of cellular activities
SROS_RS06310	SM01043	Bacterial transcriptional activator domain
SROS_RS06330	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS06330	SM00478	endonuclease III
SROS_RS06330	SM01009	AlkA N-terminal domain
SROS_RS06345	SM00382	ATPases associated with a variety of cellular activities
SROS_RS06380	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
SROS_RS06385	SM00829	Enoylreductase
SROS_RS06390	SM00849	Metallo-beta-lactamase superfamily
SROS_RS06400	SM00448	cheY-homologous receiver domain
SROS_RS06400	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS06405	SM00387	Histidine kinase-like ATPases
SROS_RS06405	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS06425	SM01001	AIR carboxylase
SROS_RS06450	SM00984	UDP binding domain
SROS_RS06610	SM00729	Elongator protein 3, MiaB family, Radical SAM
SROS_RS06680	SM00422	helix_turn_helix, mercury resistance
SROS_RS06685	SM00996	S-adenosyl-L-homocysteine hydrolase
SROS_RS06685	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
SROS_RS06690	SM00996	S-adenosyl-L-homocysteine hydrolase
SROS_RS06690	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
SROS_RS06715	SM00354	helix_turn _helix lactose operon repressor
SROS_RS06720	SM00382	ATPases associated with a variety of cellular activities
SROS_RS06780	SM00448	cheY-homologous receiver domain
SROS_RS06780	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS06785	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS06785	SM00387	Histidine kinase-like ATPases
SROS_RS06785	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS06790	SM00909	Sporulation and spore germination
SROS_RS06805	SM00421	helix_turn_helix, Lux Regulon
SROS_RS06805	SM00448	cheY-homologous receiver domain
SROS_RS06820	SM00957	SecA DEAD-like domain
SROS_RS06820	SM00958	SecA preprotein cross-linking domain
SROS_RS06840	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS06840	SM00866	SROS_RS06840
SROS_RS06880	SM00831	Cation transporter/ATPase, N-terminus
SROS_RS06945	SM00421	helix_turn_helix, Lux Regulon
SROS_RS06945	SM00448	cheY-homologous receiver domain
SROS_RS06950	SM00387	Histidine kinase-like ATPases
SROS_RS06970	SM00937	SROS_RS06970
SROS_RS06980	SM00382	ATPases associated with a variety of cellular activities
SROS_RS07005	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS07020	SM00028	Tetratricopeptide repeats
SROS_RS07020	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS07020	SM01043	Bacterial transcriptional activator domain
SROS_RS07035	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SROS_RS07155	SM00245	tail specific protease
SROS_RS07175	SM00656	SROS_RS07175
SROS_RS07195	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SROS_RS07200	SM01130	SROS_RS07200
SROS_RS07220	SM00354	helix_turn _helix lactose operon repressor
SROS_RS07240	SM00382	ATPases associated with a variety of cellular activities
SROS_RS07270	SM00327	von Willebrand factor (vWF) type A domain
SROS_RS07275	SM00327	von Willebrand factor (vWF) type A domain
SROS_RS07290	SM00382	ATPases associated with a variety of cellular activities
SROS_RS07305	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SROS_RS07305	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
SROS_RS07310	SM00671	Sel1-like repeats.
SROS_RS07320	SM00421	helix_turn_helix, Lux Regulon
SROS_RS07320	SM00448	cheY-homologous receiver domain
SROS_RS07390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS07390	SM00387	Histidine kinase-like ATPases
SROS_RS07390	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS07395	SM00448	cheY-homologous receiver domain
SROS_RS07395	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS07405	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS07445	SM00448	cheY-homologous receiver domain
SROS_RS07445	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS07450	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS07450	SM00387	Histidine kinase-like ATPases
SROS_RS07450	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS07460	SM00231	Coagulation factor 5/8 C-terminal domain, discoidin domain
SROS_RS07470	SM01119	SROS_RS07470
SROS_RS07500	SM00421	helix_turn_helix, Lux Regulon
SROS_RS07505	SM00448	cheY-homologous receiver domain
SROS_RS07585	SM00849	Metallo-beta-lactamase superfamily
SROS_RS07595	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS07605	SM00331	Sigma factor PP2C-like phosphatases
SROS_RS07605	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SROS_RS07645	SM00331	Sigma factor PP2C-like phosphatases
SROS_RS07645	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SROS_RS07675	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS07685	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS07685	SM01043	Bacterial transcriptional activator domain
SROS_RS07690	SM00642	Alpha-amylase domain
SROS_RS07695	SM00642	Alpha-amylase domain
SROS_RS07700	SM00642	Alpha-amylase domain
SROS_RS07725	SM00100	Cyclic nucleotide-monophosphate binding domain
SROS_RS07725	SM00419	helix_turn_helix, cAMP Regulatory protein
SROS_RS07745	SM00422	helix_turn_helix, mercury resistance
SROS_RS07770	SM00422	helix_turn_helix, mercury resistance
SROS_RS07795	SM00986	Uracil DNA glycosylase superfamily
SROS_RS07795	SM00987	UreE urease accessory protein, C-terminal domain 
SROS_RS07825	SM00382	ATPases associated with a variety of cellular activities
SROS_RS07835	SM00642	Alpha-amylase domain
SROS_RS07860	SM00836	DALR anticodon binding domain
SROS_RS07935	SM00357	Cold shock protein domain
SROS_RS07935	SM00382	ATPases associated with a variety of cellular activities
SROS_RS07935	SM00959	Rho termination factor, N-terminal domain
SROS_RS07940	SM00387	Histidine kinase-like ATPases
SROS_RS07945	SM00421	helix_turn_helix, Lux Regulon
SROS_RS07945	SM00448	cheY-homologous receiver domain
SROS_RS07960	SM00937	SROS_RS07960
SROS_RS08035	SM00382	ATPases associated with a variety of cellular activities
SROS_RS08060	SM00245	tail specific protease
SROS_RS08065	SM00382	ATPases associated with a variety of cellular activities
SROS_RS08080	SM00421	helix_turn_helix, Lux Regulon
SROS_RS08080	SM00448	cheY-homologous receiver domain
SROS_RS08100	SM00421	helix_turn_helix, Lux Regulon
SROS_RS08100	SM00448	cheY-homologous receiver domain
SROS_RS08105	SM00387	Histidine kinase-like ATPases
SROS_RS08115	SM00382	ATPases associated with a variety of cellular activities
SROS_RS08190	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS08210	SM00919	Malic enzyme, NAD binding domain
SROS_RS08210	SM01274	SROS_RS08210
SROS_RS08275	SM00487	DEAD-like helicases superfamily
SROS_RS08305	SM00232	JAB/MPN domain
SROS_RS08345	SM00849	Metallo-beta-lactamase superfamily
SROS_RS08380	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS08400	SM00382	ATPases associated with a variety of cellular activities
SROS_RS08405	SM00421	helix_turn_helix, Lux Regulon
SROS_RS08405	SM00448	cheY-homologous receiver domain
SROS_RS08410	SM00387	Histidine kinase-like ATPases
SROS_RS08480	SM01230	SROS_RS08480
SROS_RS08485	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS08485	SM00895	SROS_RS08485
SROS_RS08525	SM00825	Beta-ketoacyl synthase
SROS_RS08535	SM00382	ATPases associated with a variety of cellular activities
SROS_RS08555	SM00382	ATPases associated with a variety of cellular activities
SROS_RS08605	SM00938	Nitrogen regulatory protein P-II
SROS_RS08610	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SROS_RS08615	SM00387	Histidine kinase-like ATPases
SROS_RS08620	SM00960	Roadblock/LC7 domain
SROS_RS08635	SM00382	ATPases associated with a variety of cellular activities
SROS_RS08655	SM00382	ATPases associated with a variety of cellular activities
SROS_RS08660	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS08660	SM00387	Histidine kinase-like ATPases
SROS_RS08695	SM00382	ATPases associated with a variety of cellular activities
SROS_RS08715	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS08715	SM00387	Histidine kinase-like ATPases
SROS_RS08725	SM00960	Roadblock/LC7 domain
SROS_RS08760	SM00382	ATPases associated with a variety of cellular activities
SROS_RS08780	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS08780	SM00387	Histidine kinase-like ATPases
SROS_RS08785	SM00960	Roadblock/LC7 domain
SROS_RS08800	SM00382	ATPases associated with a variety of cellular activities
SROS_RS08800	SM00962	SRP54-type protein, GTPase domain
SROS_RS08800	SM00963	SRP54-type protein, helical bundle domain
SROS_RS08880	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS08945	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS08950	SM00857	Resolvase, N terminal domain
SROS_RS08980	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS09035	SM00382	ATPases associated with a variety of cellular activities
SROS_RS09060	SM00344	helix_turn_helix ASNC type
SROS_RS09070	SM00382	ATPases associated with a variety of cellular activities
SROS_RS09130	SM00507	HNH nucleases
SROS_RS09165	SM00450	Rhodanese Homology Domain
SROS_RS09165	SM00849	Metallo-beta-lactamase superfamily
SROS_RS09170	SM00450	Rhodanese Homology Domain
SROS_RS09215	SM00421	helix_turn_helix, Lux Regulon
SROS_RS09215	SM00448	cheY-homologous receiver domain
SROS_RS09240	SM00344	helix_turn_helix ASNC type
SROS_RS09255	SM00060	Fibronectin type 3 domain
SROS_RS09255	SM00495	Chitin-binding domain type 3
SROS_RS09260	SM00060	Fibronectin type 3 domain
SROS_RS09260	SM00636	SROS_RS09260
SROS_RS09265	SM00495	Chitin-binding domain type 3
SROS_RS09285	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SROS_RS09325	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS09330	SM00382	ATPases associated with a variety of cellular activities
SROS_RS09345	SM00421	helix_turn_helix, Lux Regulon
SROS_RS09345	SM00448	cheY-homologous receiver domain
SROS_RS09390	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SROS_RS09390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS09390	SM00387	Histidine kinase-like ATPases
SROS_RS09390	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS09390	SM00448	cheY-homologous receiver domain
SROS_RS09440	SM00382	ATPases associated with a variety of cellular activities
SROS_RS09560	SM00829	Enoylreductase
SROS_RS09570	SM00382	ATPases associated with a variety of cellular activities
SROS_RS09575	SM00382	ATPases associated with a variety of cellular activities
SROS_RS09630	SM00881	CoA binding domain
SROS_RS09710	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS09795	SM00422	helix_turn_helix, mercury resistance
SROS_RS09830	SM00028	Tetratricopeptide repeats
SROS_RS09830	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS09830	SM01043	Bacterial transcriptional activator domain
SROS_RS09835	SM00100	Cyclic nucleotide-monophosphate binding domain
SROS_RS09835	SM00387	Histidine kinase-like ATPases
SROS_RS09840	SM00448	cheY-homologous receiver domain
SROS_RS09850	SM01230	SROS_RS09850
SROS_RS09855	SM00422	helix_turn_helix, mercury resistance
SROS_RS09940	SM00829	Enoylreductase
SROS_RS09965	SM00882	Coenzyme A transferase
SROS_RS09970	SM00882	Coenzyme A transferase
SROS_RS09980	SM00822	SROS_RS09980
SROS_RS09985	SM00822	SROS_RS09985
SROS_RS10010	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS10070	SM00382	ATPases associated with a variety of cellular activities
SROS_RS10075	SM00382	ATPases associated with a variety of cellular activities
SROS_RS10085	SM01043	Bacterial transcriptional activator domain
SROS_RS10095	SM00822	SROS_RS10095
SROS_RS10105	SM00903	Flavin reductase like domain
SROS_RS10125	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS10125	SM00866	SROS_RS10125
SROS_RS10190	SM01236	SROS_RS10190
SROS_RS10220	SM00316	Ribosomal protein S1-like RNA-binding domain
SROS_RS10220	SM00322	K homology RNA-binding domain
SROS_RS10260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS10260	SM00895	SROS_RS10260
SROS_RS10285	SM00382	ATPases associated with a variety of cellular activities
SROS_RS10290	SM00382	ATPases associated with a variety of cellular activities
SROS_RS10295	SM00904	Riboflavin kinase
SROS_RS10300	SM01387	SROS_RS10300
SROS_RS10305	SM00316	Ribosomal protein S1-like RNA-binding domain
SROS_RS10305	SM00322	K homology RNA-binding domain
SROS_RS10330	SM01018	B12 binding domain
SROS_RS10380	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS10425	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS10440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS10475	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS10475	SM00866	SROS_RS10475
SROS_RS10480	SM01130	SROS_RS10480
SROS_RS10485	SM00849	Metallo-beta-lactamase superfamily
SROS_RS10490	SM00346	helix_turn_helix isocitrate lyase regulation
SROS_RS10495	SM00382	ATPases associated with a variety of cellular activities
SROS_RS10495	SM00843	SROS_RS10495
SROS_RS10505	SM00729	Elongator protein 3, MiaB family, Radical SAM
SROS_RS10520	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS10525	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SROS_RS10525	SM01232	SROS_RS10525
SROS_RS10565	SM00823	Phosphopantetheine attachment site
SROS_RS10570	SM00823	Phosphopantetheine attachment site
SROS_RS10625	SM00706	Beta propeller repeats in Physarum polycephalum tectonins, Limulus lectin L-6 and animal hypothetical proteins.
SROS_RS10640	SM00923	MbtH-like protein
SROS_RS10645	SM00823	Phosphopantetheine attachment site
SROS_RS10660	SM00823	Phosphopantetheine attachment site
SROS_RS10670	SM00861	Transketolase, pyrimidine binding domain
SROS_RS10680	SM00823	Phosphopantetheine attachment site
SROS_RS10695	SM00487	DEAD-like helicases superfamily
SROS_RS10695	SM00490	helicase superfamily c-terminal domain
SROS_RS10720	SM00382	ATPases associated with a variety of cellular activities
SROS_RS10730	SM00322	K homology RNA-binding domain
SROS_RS10730	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SROS_RS10750	SM00062	Bacterial periplasmic substrate-binding proteins
SROS_RS10755	SM00382	ATPases associated with a variety of cellular activities
SROS_RS10765	SM00729	Elongator protein 3, MiaB family, Radical SAM
SROS_RS10820	SM00822	SROS_RS10820
SROS_RS10845	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS10845	SM00387	Histidine kinase-like ATPases
SROS_RS10845	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS10850	SM00448	cheY-homologous receiver domain
SROS_RS10850	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS10895	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS10920	SM00346	helix_turn_helix isocitrate lyase regulation
SROS_RS10955	SM00331	Sigma factor PP2C-like phosphatases
SROS_RS10955	SM00448	cheY-homologous receiver domain
SROS_RS10960	SM00387	Histidine kinase-like ATPases
SROS_RS10960	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS10960	SM00448	cheY-homologous receiver domain
SROS_RS10965	SM00331	Sigma factor PP2C-like phosphatases
SROS_RS10970	SM00387	Histidine kinase-like ATPases
SROS_RS11000	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SROS_RS11010	SM00849	Metallo-beta-lactamase superfamily
SROS_RS11030	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS11045	SM00838	Elongation factor G C-terminus
SROS_RS11050	SM00636	SROS_RS11050
SROS_RS11055	SM00729	Elongator protein 3, MiaB family, Radical SAM
SROS_RS11080	SM00271	DnaJ molecular chaperone homology domain
SROS_RS11115	SM00116	Domain in cystathionine beta-synthase and other proteins.
SROS_RS11115	SM01091	Transporter associated domain
SROS_RS11130	SM00421	helix_turn_helix, Lux Regulon
SROS_RS11130	SM00448	cheY-homologous receiver domain
SROS_RS11160	SM00062	Bacterial periplasmic substrate-binding proteins
SROS_RS11180	SM00917	LeuA allosteric (dimerisation) domain
SROS_RS11185	SM00422	helix_turn_helix, mercury resistance
SROS_RS11190	SM00028	Tetratricopeptide repeats
SROS_RS11210	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS11215	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS11260	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS11265	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SROS_RS11290	SM00344	helix_turn_helix ASNC type
SROS_RS11340	SM00382	ATPases associated with a variety of cellular activities
SROS_RS11370	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SROS_RS11380	SM00400	zinc finger
SROS_RS11380	SM00493	SROS_RS11380
SROS_RS11380	SM00766	DNA primase DnaG DnaB-binding
SROS_RS11435	SM01130	SROS_RS11435
SROS_RS11465	SM01130	SROS_RS11465
SROS_RS11470	SM00984	UDP binding domain
SROS_RS11555	SM00382	ATPases associated with a variety of cellular activities
SROS_RS11605	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS11635	SM00368	Leucine rich repeat, ribonuclease inhibitor type
SROS_RS11655	SM00382	ATPases associated with a variety of cellular activities
SROS_RS11700	SM01133	SROS_RS11700
SROS_RS11715	SM00382	ATPases associated with a variety of cellular activities
SROS_RS11725	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS11725	SM00866	SROS_RS11725
SROS_RS11735	SM00823	Phosphopantetheine attachment site
SROS_RS11735	SM00824	Thioesterase
SROS_RS11740	SM00823	Phosphopantetheine attachment site
SROS_RS11745	SM00923	MbtH-like protein
SROS_RS11750	SM00822	SROS_RS11750
SROS_RS11750	SM00823	Phosphopantetheine attachment site
SROS_RS11750	SM00825	Beta-ketoacyl synthase
SROS_RS11750	SM00826	SROS_RS11750
SROS_RS11750	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SROS_RS11755	SM00823	Phosphopantetheine attachment site
SROS_RS11780	SM00823	Phosphopantetheine attachment site
SROS_RS11780	SM00825	Beta-ketoacyl synthase
SROS_RS11785	SM01043	Bacterial transcriptional activator domain
SROS_RS11845	SM00028	Tetratricopeptide repeats
SROS_RS11855	SM00014	Acid phosphatase homologues
SROS_RS11860	SM00421	helix_turn_helix, Lux Regulon
SROS_RS11860	SM00448	cheY-homologous receiver domain
SROS_RS11950	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS11970	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS11970	SM00895	SROS_RS11970
SROS_RS11985	SM00382	ATPases associated with a variety of cellular activities
SROS_RS11990	SM00382	ATPases associated with a variety of cellular activities
SROS_RS11995	SM01130	SROS_RS11995
SROS_RS12040	SM00382	ATPases associated with a variety of cellular activities
SROS_RS12045	SM00813	Alpha-L-arabinofuranosidase C-terminus
SROS_RS12050	SM00354	helix_turn _helix lactose operon repressor
SROS_RS12060	SM00421	helix_turn_helix, Lux Regulon
SROS_RS12065	SM00422	helix_turn_helix, mercury resistance
SROS_RS12080	SM00060	Fibronectin type 3 domain
SROS_RS12080	SM00637	SROS_RS12080
SROS_RS12105	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS12115	SM00883	Chaperonin 10 Kd subunit
SROS_RS12135	SM00450	Rhodanese Homology Domain
SROS_RS12150	SM00421	helix_turn_helix, Lux Regulon
SROS_RS12150	SM00448	cheY-homologous receiver domain
SROS_RS12160	SM00382	ATPases associated with a variety of cellular activities
SROS_RS12200	SM00855	Phosphoglycerate mutase family
SROS_RS12240	SM00382	ATPases associated with a variety of cellular activities
SROS_RS12270	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS12280	SM00421	helix_turn_helix, Lux Regulon
SROS_RS12280	SM00448	cheY-homologous receiver domain
SROS_RS12320	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS12350	SM00382	ATPases associated with a variety of cellular activities
SROS_RS12370	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS12415	SM00382	ATPases associated with a variety of cellular activities
SROS_RS12430	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SROS_RS12430	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
SROS_RS12435	SM00894	Excalibur calcium-binding domain
SROS_RS12445	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SROS_RS12455	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS12525	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS12565	SM00710	Parallel beta-helix repeats
SROS_RS12610	SM00387	Histidine kinase-like ATPases
SROS_RS12615	SM00421	helix_turn_helix, Lux Regulon
SROS_RS12615	SM00448	cheY-homologous receiver domain
SROS_RS12615	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS12615	SM01043	Bacterial transcriptional activator domain
SROS_RS12620	SM00387	Histidine kinase-like ATPases
SROS_RS12630	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS12640	SM00054	EF-hand, calcium binding motif
SROS_RS12650	SM01230	SROS_RS12650
SROS_RS12735	SM01230	SROS_RS12735
SROS_RS12755	SM01217	SROS_RS12755
SROS_RS12775	SM00729	Elongator protein 3, MiaB family, Radical SAM
SROS_RS12810	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS12915	SM00116	Domain in cystathionine beta-synthase and other proteins.
SROS_RS12990	SM00465	GIY-YIG type nucleases (URI domain)
SROS_RS12990	SM00479	SROS_RS12990
SROS_RS13105	SM00563	Phosphate acyltransferases
SROS_RS13170	SM00354	helix_turn _helix lactose operon repressor
SROS_RS13180	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS13230	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS13275	SM00327	von Willebrand factor (vWF) type A domain
SROS_RS13275	SM00609	Vault protein Inter-alpha-Trypsin domain
SROS_RS13325	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS13350	SM00981	SROS_RS13350
SROS_RS13365	SM00387	Histidine kinase-like ATPases
SROS_RS13370	SM00448	cheY-homologous receiver domain
SROS_RS13370	SM00850	LytTr DNA-binding domain
SROS_RS13410	SM00518	AP endonuclease family 2
SROS_RS13430	SM01092	CO dehydrogenase flavoprotein C-terminal domain
SROS_RS13460	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS13460	SM00740	SROS_RS13460
SROS_RS13530	SM00331	Sigma factor PP2C-like phosphatases
SROS_RS13535	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS13595	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
SROS_RS13600	SM00851	MGS-like domain
SROS_RS13600	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SROS_RS13615	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SROS_RS13625	SM00072	Guanylate kinase homologues.
SROS_RS13630	SM01409	SROS_RS13630
SROS_RS13655	SM00421	helix_turn_helix, Lux Regulon
SROS_RS13660	SM00421	helix_turn_helix, Lux Regulon
SROS_RS13755	SM00448	cheY-homologous receiver domain
SROS_RS13755	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS13775	SM00382	ATPases associated with a variety of cellular activities
SROS_RS13820	SM00841	Elongation factor P, C-terminal
SROS_RS13820	SM01185	SROS_RS13820
SROS_RS13845	SM00460	Transglutaminase/protease-like homologues
SROS_RS13855	SM00382	ATPases associated with a variety of cellular activities
SROS_RS13920	SM00864	Tubulin/FtsZ family, GTPase domain
SROS_RS13920	SM00865	Tubulin/FtsZ family, C-terminal domain
SROS_RS13965	SM00363	S4 RNA-binding domain
SROS_RS13985	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS13990	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS13995	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS14005	SM00830	Chorismate mutase type II
SROS_RS14015	SM00481	DNA polymerase alpha chain like domain
SROS_RS14130	SM01230	SROS_RS14130
SROS_RS14185	SM00382	ATPases associated with a variety of cellular activities
SROS_RS14190	SM00382	ATPases associated with a variety of cellular activities
SROS_RS14200	SM00062	Bacterial periplasmic substrate-binding proteins
SROS_RS14205	SM00382	ATPases associated with a variety of cellular activities
SROS_RS14325	SM00448	cheY-homologous receiver domain
SROS_RS14325	SM01012	SROS_RS14325
SROS_RS14345	SM00382	ATPases associated with a variety of cellular activities
SROS_RS14350	SM00382	ATPases associated with a variety of cellular activities
SROS_RS14360	SM00062	Bacterial periplasmic substrate-binding proteins
SROS_RS14360	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
SROS_RS14370	SM00382	ATPases associated with a variety of cellular activities
SROS_RS14380	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SROS_RS14380	SM00474	3'-5' exonuclease
SROS_RS14380	SM00475	5'-3' exonuclease
SROS_RS14380	SM00482	DNA polymerase A domain
SROS_RS14390	SM00316	Ribosomal protein S1-like RNA-binding domain
SROS_RS14415	SM00255	Toll - interleukin 1 - resistance
SROS_RS14415	SM00320	WD40 repeats
SROS_RS14445	SM00244	prohibitin homologues
SROS_RS14450	SM00244	prohibitin homologues
SROS_RS14455	SM00487	DEAD-like helicases superfamily
SROS_RS14455	SM00490	helicase superfamily c-terminal domain
SROS_RS14460	SM00090	RIO-like kinase
SROS_RS14520	SM00363	S4 RNA-binding domain
SROS_RS14540	SM00382	ATPases associated with a variety of cellular activities
SROS_RS14555	SM00421	helix_turn_helix, Lux Regulon
SROS_RS14565	SM00849	Metallo-beta-lactamase superfamily
SROS_RS14595	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS14660	SM01011	Aminopeptidase P, N-terminal domain
SROS_RS14680	SM00382	ATPases associated with a variety of cellular activities
SROS_RS14685	SM00382	ATPases associated with a variety of cellular activities
SROS_RS14695	SM00116	Domain in cystathionine beta-synthase and other proteins.
SROS_RS14705	SM00382	ATPases associated with a variety of cellular activities
SROS_RS14710	SM00382	ATPases associated with a variety of cellular activities
SROS_RS14740	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS14760	SM01120	SROS_RS14760
SROS_RS14790	SM00563	Phosphate acyltransferases
SROS_RS14800	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS14845	SM00382	ATPases associated with a variety of cellular activities
SROS_RS14850	SM00062	Bacterial periplasmic substrate-binding proteins
SROS_RS14855	SM00382	ATPases associated with a variety of cellular activities
SROS_RS14940	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS15035	SM00091	PAS domain
SROS_RS15035	SM00331	Sigma factor PP2C-like phosphatases
SROS_RS15040	SM01012	SROS_RS15040
SROS_RS15120	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS15145	SM00960	Roadblock/LC7 domain
SROS_RS15150	SM00387	Histidine kinase-like ATPases
SROS_RS15180	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS15220	SM00231	Coagulation factor 5/8 C-terminal domain, discoidin domain
SROS_RS15220	SM00710	Parallel beta-helix repeats
SROS_RS15225	SM00822	SROS_RS15225
SROS_RS15230	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS15265	SM00421	helix_turn_helix, Lux Regulon
SROS_RS15295	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS15370	SM00382	ATPases associated with a variety of cellular activities
SROS_RS15375	SM00382	ATPases associated with a variety of cellular activities
SROS_RS15420	SM00382	ATPases associated with a variety of cellular activities
SROS_RS15425	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS15425	SM00895	SROS_RS15425
SROS_RS15440	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
SROS_RS15455	SM00382	ATPases associated with a variety of cellular activities
SROS_RS15475	SM00387	Histidine kinase-like ATPases
SROS_RS15480	SM00960	Roadblock/LC7 domain
SROS_RS15500	SM00421	helix_turn_helix, Lux Regulon
SROS_RS15500	SM00448	cheY-homologous receiver domain
SROS_RS15540	SM00422	helix_turn_helix, mercury resistance
SROS_RS15565	SM00327	von Willebrand factor (vWF) type A domain
SROS_RS15580	SM00014	Acid phosphatase homologues
SROS_RS15580	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SROS_RS15645	SM00191	Integrin alpha (beta-propellor repeats).
SROS_RS15685	SM00729	Elongator protein 3, MiaB family, Radical SAM
SROS_RS15725	SM00421	helix_turn_helix, Lux Regulon
SROS_RS15725	SM00448	cheY-homologous receiver domain
SROS_RS15735	SM00382	ATPases associated with a variety of cellular activities
SROS_RS15735	SM00464	Found in ATP-dependent protease La (LON)
SROS_RS15745	SM00382	ATPases associated with a variety of cellular activities
SROS_RS15745	SM00930	SROS_RS15745
SROS_RS15760	SM00421	helix_turn_helix, Lux Regulon
SROS_RS15760	SM00448	cheY-homologous receiver domain
SROS_RS15795	SM00316	Ribosomal protein S1-like RNA-binding domain
SROS_RS15835	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS15855	SM00028	Tetratricopeptide repeats
SROS_RS15860	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SROS_RS15885	SM00382	ATPases associated with a variety of cellular activities
SROS_RS15890	SM00382	ATPases associated with a variety of cellular activities
SROS_RS16020	SM00354	helix_turn _helix lactose operon repressor
SROS_RS16120	SM00354	helix_turn _helix lactose operon repressor
SROS_RS16140	SM00642	Alpha-amylase domain
SROS_RS16150	SM00387	Histidine kinase-like ATPases
SROS_RS16155	SM00421	helix_turn_helix, Lux Regulon
SROS_RS16155	SM00448	cheY-homologous receiver domain
SROS_RS16170	SM00823	Phosphopantetheine attachment site
SROS_RS16175	SM00823	Phosphopantetheine attachment site
SROS_RS16180	SM00060	Fibronectin type 3 domain
SROS_RS16180	SM00642	Alpha-amylase domain
SROS_RS16180	SM01066	Carbohydrate binding domain
SROS_RS16185	SM00632	SROS_RS16185
SROS_RS16185	SM00642	Alpha-amylase domain
SROS_RS16185	SM01065	Starch binding domain
SROS_RS16185	SM01066	Carbohydrate binding domain
SROS_RS16190	SM00642	Alpha-amylase domain
SROS_RS16210	SM00642	Alpha-amylase domain
SROS_RS16215	SM00354	helix_turn _helix lactose operon repressor
SROS_RS16225	SM00823	Phosphopantetheine attachment site
SROS_RS16230	SM00823	Phosphopantetheine attachment site
SROS_RS16250	SM00382	ATPases associated with a variety of cellular activities
SROS_RS16255	SM00354	helix_turn _helix lactose operon repressor
SROS_RS16275	SM00344	helix_turn_helix ASNC type
SROS_RS16280	SM00091	PAS domain
SROS_RS16280	SM00331	Sigma factor PP2C-like phosphatases
SROS_RS16290	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS16420	SM00028	Tetratricopeptide repeats
SROS_RS16420	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS16420	SM01043	Bacterial transcriptional activator domain
SROS_RS16425	SM00060	Fibronectin type 3 domain
SROS_RS16425	SM00560	LamG-like jellyroll fold domain
SROS_RS16445	SM00644	SROS_RS16445
SROS_RS16455	SM00028	Tetratricopeptide repeats
SROS_RS16455	SM00382	ATPases associated with a variety of cellular activities
SROS_RS16455	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS16455	SM01043	Bacterial transcriptional activator domain
SROS_RS16470	SM00354	helix_turn _helix lactose operon repressor
SROS_RS16480	SM00231	Coagulation factor 5/8 C-terminal domain, discoidin domain
SROS_RS16520	SM00363	S4 RNA-binding domain
SROS_RS16520	SM01390	SROS_RS16520
SROS_RS16540	SM00382	ATPases associated with a variety of cellular activities
SROS_RS16555	SM00507	HNH nucleases
SROS_RS16615	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS16615	SM00387	Histidine kinase-like ATPases
SROS_RS16615	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS16620	SM00448	cheY-homologous receiver domain
SROS_RS16620	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS16630	SM00382	ATPases associated with a variety of cellular activities
SROS_RS16640	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS16650	SM00903	Flavin reductase like domain
SROS_RS16655	SM00028	Tetratricopeptide repeats
SROS_RS16665	SM00382	ATPases associated with a variety of cellular activities
SROS_RS16665	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS16665	SM01043	Bacterial transcriptional activator domain
SROS_RS16685	SM00382	ATPases associated with a variety of cellular activities
SROS_RS16720	SM00382	ATPases associated with a variety of cellular activities
SROS_RS16730	SM00411	bacterial (prokaryotic) histone like domain
SROS_RS16745	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS16775	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS16775	SM00320	WD40 repeats
SROS_RS16780	SM00240	Forkhead associated domain
SROS_RS16820	SM00382	ATPases associated with a variety of cellular activities
SROS_RS16835	SM00823	Phosphopantetheine attachment site
SROS_RS16840	SM00923	MbtH-like protein
SROS_RS16850	SM00382	ATPases associated with a variety of cellular activities
SROS_RS16885	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS16915	SM00382	ATPases associated with a variety of cellular activities
SROS_RS16945	SM00382	ATPases associated with a variety of cellular activities
SROS_RS16950	SM00829	Enoylreductase
SROS_RS16995	SM00823	Phosphopantetheine attachment site
SROS_RS17030	SM00382	ATPases associated with a variety of cellular activities
SROS_RS17035	SM00382	ATPases associated with a variety of cellular activities
SROS_RS17070	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
SROS_RS17085	SM00421	helix_turn_helix, Lux Regulon
SROS_RS17085	SM00448	cheY-homologous receiver domain
SROS_RS17105	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SROS_RS17105	SM00387	Histidine kinase-like ATPases
SROS_RS17110	SM00421	helix_turn_helix, Lux Regulon
SROS_RS17110	SM00448	cheY-homologous receiver domain
SROS_RS17125	SM00116	Domain in cystathionine beta-synthase and other proteins.
SROS_RS17195	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS17210	SM00346	helix_turn_helix isocitrate lyase regulation
SROS_RS17220	SM00382	ATPases associated with a variety of cellular activities
SROS_RS17220	SM00994	ClpX C4-type zinc finger
SROS_RS17220	SM01086	C-terminal, D2-small domain, of ClpB protein
SROS_RS17245	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS17265	SM00495	Chitin-binding domain type 3
SROS_RS17270	SM00060	Fibronectin type 3 domain
SROS_RS17270	SM00636	SROS_RS17270
SROS_RS17270	SM00637	SROS_RS17270
SROS_RS17275	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS17320	SM00292	breast cancer carboxy-terminal domain
SROS_RS17320	SM00532	Ligase N family
SROS_RS17325	SM00316	Ribosomal protein S1-like RNA-binding domain
SROS_RS17405	SM00644	SROS_RS17405
SROS_RS17415	SM01260	SROS_RS17415
SROS_RS17420	SM00382	ATPases associated with a variety of cellular activities
SROS_RS17465	SM00495	Chitin-binding domain type 3
SROS_RS17500	SM00344	helix_turn_helix ASNC type
SROS_RS17590	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS17595	SM00829	Enoylreductase
SROS_RS17600	SM00829	Enoylreductase
SROS_RS17635	SM00458	Ricin-type beta-trefoil
SROS_RS17665	SM00422	helix_turn_helix, mercury resistance
SROS_RS17755	SM00028	Tetratricopeptide repeats
SROS_RS17755	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS17755	SM01043	Bacterial transcriptional activator domain
SROS_RS17785	SM00823	Phosphopantetheine attachment site
SROS_RS17815	SM00421	helix_turn_helix, Lux Regulon
SROS_RS17815	SM00448	cheY-homologous receiver domain
SROS_RS17840	SM00382	ATPases associated with a variety of cellular activities
SROS_RS18010	SM00861	Transketolase, pyrimidine binding domain
SROS_RS18050	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS18055	SM00354	helix_turn _helix lactose operon repressor
SROS_RS18060	SM01217	SROS_RS18060
SROS_RS18090	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SROS_RS18150	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS18170	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SROS_RS18175	SM01092	CO dehydrogenase flavoprotein C-terminal domain
SROS_RS18255	SM00382	ATPases associated with a variety of cellular activities
SROS_RS18260	SM00421	helix_turn_helix, Lux Regulon
SROS_RS18290	SM00823	Phosphopantetheine attachment site
SROS_RS18295	SM00823	Phosphopantetheine attachment site
SROS_RS18310	SM00824	Thioesterase
SROS_RS18390	SM00421	helix_turn_helix, Lux Regulon
SROS_RS18400	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
SROS_RS18400	SM00606	Cellulose Binding Domain Type IV
SROS_RS18415	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS18420	SM00028	Tetratricopeptide repeats
SROS_RS18420	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS18420	SM01043	Bacterial transcriptional activator domain
SROS_RS18430	SM00095	Transthyretin
SROS_RS18435	SM00917	LeuA allosteric (dimerisation) domain
SROS_RS18440	SM00421	helix_turn_helix, Lux Regulon
SROS_RS18445	SM01321	SROS_RS18445
SROS_RS18455	SM00878	Biotin carboxylase C-terminal domain
SROS_RS18460	SM00155	Phospholipase D. Active site motifs.
SROS_RS18470	SM00382	ATPases associated with a variety of cellular activities
SROS_RS18475	SM00382	ATPases associated with a variety of cellular activities
SROS_RS18480	SM00387	Histidine kinase-like ATPases
SROS_RS18480	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS18485	SM00448	cheY-homologous receiver domain
SROS_RS18485	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS18500	SM00354	helix_turn _helix lactose operon repressor
SROS_RS18605	SM01207	SROS_RS18605
SROS_RS18665	SM00354	helix_turn _helix lactose operon repressor
SROS_RS18700	SM00346	helix_turn_helix isocitrate lyase regulation
SROS_RS18735	SM00479	SROS_RS18735
SROS_RS18755	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS18770	SM00448	cheY-homologous receiver domain
SROS_RS18775	SM00091	PAS domain
SROS_RS18775	SM00387	Histidine kinase-like ATPases
SROS_RS18795	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS18900	SM00495	Chitin-binding domain type 3
SROS_RS18915	SM00248	ankyrin repeats
SROS_RS18965	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SROS_RS19000	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS19105	SM00421	helix_turn_helix, Lux Regulon
SROS_RS19155	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS19185	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS19210	SM01350	SROS_RS19210
SROS_RS19215	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS19245	SM00829	Enoylreductase
SROS_RS19250	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS19305	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS19305	SM00895	SROS_RS19305
SROS_RS19335	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SROS_RS19410	SM00421	helix_turn_helix, Lux Regulon
SROS_RS19410	SM00448	cheY-homologous receiver domain
SROS_RS19430	SM00240	Forkhead associated domain
SROS_RS19435	SM00422	helix_turn_helix, mercury resistance
SROS_RS19445	SM00422	helix_turn_helix, mercury resistance
SROS_RS19535	SM00271	DnaJ molecular chaperone homology domain
SROS_RS19545	SM00382	ATPases associated with a variety of cellular activities
SROS_RS19545	SM01086	C-terminal, D2-small domain, of ClpB protein
SROS_RS19555	SM00100	Cyclic nucleotide-monophosphate binding domain
SROS_RS19560	SM00421	helix_turn_helix, Lux Regulon
SROS_RS19565	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS19565	SM00866	SROS_RS19565
SROS_RS19570	SM01260	SROS_RS19570
SROS_RS19600	SM00382	ATPases associated with a variety of cellular activities
SROS_RS19665	SM00421	helix_turn_helix, Lux Regulon
SROS_RS19665	SM00448	cheY-homologous receiver domain
SROS_RS19685	SM00421	helix_turn_helix, Lux Regulon
SROS_RS19685	SM00448	cheY-homologous receiver domain
SROS_RS19710	SM00245	tail specific protease
SROS_RS19725	SM00563	Phosphate acyltransferases
SROS_RS19825	SM00354	helix_turn _helix lactose operon repressor
SROS_RS19845	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS19900	SM00710	Parallel beta-helix repeats
SROS_RS19900	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
SROS_RS19920	SM00829	Enoylreductase
SROS_RS19935	SM00382	ATPases associated with a variety of cellular activities
SROS_RS19960	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS19970	SM00387	Histidine kinase-like ATPases
SROS_RS19975	SM00421	helix_turn_helix, Lux Regulon
SROS_RS19975	SM00448	cheY-homologous receiver domain
SROS_RS19995	SM00244	prohibitin homologues
SROS_RS20005	SM00823	Phosphopantetheine attachment site
SROS_RS20005	SM00824	Thioesterase
SROS_RS20010	SM00823	Phosphopantetheine attachment site
SROS_RS20015	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SROS_RS20110	SM00822	SROS_RS20110
SROS_RS20120	SM00822	SROS_RS20120
SROS_RS20145	SM00825	Beta-ketoacyl synthase
SROS_RS20150	SM00825	Beta-ketoacyl synthase
SROS_RS20155	SM00823	Phosphopantetheine attachment site
SROS_RS20170	SM00822	SROS_RS20170
SROS_RS20265	SM01043	Bacterial transcriptional activator domain
SROS_RS20315	SM00382	ATPases associated with a variety of cellular activities
SROS_RS20335	SM00825	Beta-ketoacyl synthase
SROS_RS20360	SM00878	Biotin carboxylase C-terminal domain
SROS_RS20375	SM00829	Enoylreductase
SROS_RS20380	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS20385	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SROS_RS20385	SM00331	Sigma factor PP2C-like phosphatases
SROS_RS20405	SM00421	helix_turn_helix, Lux Regulon
SROS_RS20425	SM00422	helix_turn_helix, mercury resistance
SROS_RS20450	SM00422	helix_turn_helix, mercury resistance
SROS_RS20475	SM00421	helix_turn_helix, Lux Regulon
SROS_RS20475	SM00448	cheY-homologous receiver domain
SROS_RS20570	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS20595	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS20600	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS20710	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS20795	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
SROS_RS20800	SM01043	Bacterial transcriptional activator domain
SROS_RS20805	SM00822	SROS_RS20805
SROS_RS20805	SM00823	Phosphopantetheine attachment site
SROS_RS20805	SM00825	Beta-ketoacyl synthase
SROS_RS20805	SM00826	SROS_RS20805
SROS_RS20805	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SROS_RS20810	SM00185	Armadillo/beta-catenin-like repeats
SROS_RS20810	SM00567	E-Z type HEAT repeats
SROS_RS20835	SM00632	SROS_RS20835
SROS_RS20835	SM00642	Alpha-amylase domain
SROS_RS20850	SM00028	Tetratricopeptide repeats
SROS_RS20850	SM01043	Bacterial transcriptional activator domain
SROS_RS20910	SM00382	ATPases associated with a variety of cellular activities
SROS_RS20935	SM00421	helix_turn_helix, Lux Regulon
SROS_RS20940	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS20945	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SROS_RS20970	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS20975	SM00829	Enoylreductase
SROS_RS20985	SM00481	DNA polymerase alpha chain like domain
SROS_RS20995	SM00382	ATPases associated with a variety of cellular activities
SROS_RS21030	SM00421	helix_turn_helix, Lux Regulon
SROS_RS21030	SM00448	cheY-homologous receiver domain
SROS_RS21055	SM00382	ATPases associated with a variety of cellular activities
SROS_RS21105	SM00369	Leucine-rich repeats, typical (most populated) subfamily
SROS_RS21140	SM00829	Enoylreductase
SROS_RS21190	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS21260	SM00320	WD40 repeats
SROS_RS21285	SM00382	ATPases associated with a variety of cellular activities
SROS_RS21300	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS21420	SM00421	helix_turn_helix, Lux Regulon
SROS_RS21420	SM00448	cheY-homologous receiver domain
SROS_RS21480	SM00422	helix_turn_helix, mercury resistance
SROS_RS21525	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS21535	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS21545	SM00998	Adenylosuccinate lyase C-terminus
SROS_RS21560	SM00422	helix_turn_helix, mercury resistance
SROS_RS21570	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS21580	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS21655	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS21660	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS21660	SM01043	Bacterial transcriptional activator domain
SROS_RS21680	SM00421	helix_turn_helix, Lux Regulon
SROS_RS21680	SM00448	cheY-homologous receiver domain
SROS_RS21685	SM00387	Histidine kinase-like ATPases
SROS_RS21695	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS21715	SM00710	Parallel beta-helix repeats
SROS_RS21745	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SROS_RS21745	SM00331	Sigma factor PP2C-like phosphatases
SROS_RS21770	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS21775	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SROS_RS21775	SM00382	ATPases associated with a variety of cellular activities
SROS_RS21790	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS21795	SM00825	Beta-ketoacyl synthase
SROS_RS21815	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS21820	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS21830	SM00226	Low molecular weight phosphatase family
SROS_RS21835	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS21880	SM00421	helix_turn_helix, Lux Regulon
SROS_RS21880	SM00448	cheY-homologous receiver domain
SROS_RS21895	SM00382	ATPases associated with a variety of cellular activities
SROS_RS21900	SM00382	ATPases associated with a variety of cellular activities
SROS_RS21910	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS21955	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS22050	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS22070	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS22080	SM00650	Ribosomal RNA adenine dimethylases
SROS_RS22095	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS22150	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS22160	SM00357	Cold shock protein domain
SROS_RS22180	SM00344	helix_turn_helix ASNC type
SROS_RS22200	SM00829	Enoylreductase
SROS_RS22210	SM00822	SROS_RS22210
SROS_RS22215	SM00421	helix_turn_helix, Lux Regulon
SROS_RS22215	SM00448	cheY-homologous receiver domain
SROS_RS22220	SM00387	Histidine kinase-like ATPases
SROS_RS22225	SM00382	ATPases associated with a variety of cellular activities
SROS_RS22240	SM00822	SROS_RS22240
SROS_RS22250	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS22285	SM00344	helix_turn_helix ASNC type
SROS_RS22305	SM00062	Bacterial periplasmic substrate-binding proteins
SROS_RS22315	SM00382	ATPases associated with a variety of cellular activities
SROS_RS22320	SM00421	helix_turn_helix, Lux Regulon
SROS_RS22320	SM00448	cheY-homologous receiver domain
SROS_RS22330	SM00421	helix_turn_helix, Lux Regulon
SROS_RS22390	SM00364	Leucine-rich repeats, bacterial type
SROS_RS22390	SM00365	Leucine-rich repeat, SDS22-like subfamily
SROS_RS22390	SM00369	Leucine-rich repeats, typical (most populated) subfamily
SROS_RS22400	SM00320	WD40 repeats
SROS_RS22410	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS22440	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS22490	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS22535	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS22535	SM01043	Bacterial transcriptional activator domain
SROS_RS22560	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS22615	SM00014	Acid phosphatase homologues
SROS_RS22685	SM00421	helix_turn_helix, Lux Regulon
SROS_RS22685	SM00448	cheY-homologous receiver domain
SROS_RS22695	SM00382	ATPases associated with a variety of cellular activities
SROS_RS22710	SM00857	Resolvase, N terminal domain
SROS_RS22730	SM00831	Cation transporter/ATPase, N-terminus
SROS_RS22740	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS22770	SM00382	ATPases associated with a variety of cellular activities
SROS_RS22810	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SROS_RS22850	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS22850	SM00895	SROS_RS22850
SROS_RS22860	SM00382	ATPases associated with a variety of cellular activities
SROS_RS22865	SM00382	ATPases associated with a variety of cellular activities
SROS_RS22940	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS22950	SM00857	Resolvase, N terminal domain
SROS_RS23030	SM00421	helix_turn_helix, Lux Regulon
SROS_RS23030	SM00448	cheY-homologous receiver domain
SROS_RS23045	SM00382	ATPases associated with a variety of cellular activities
SROS_RS23085	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS23085	SM00387	Histidine kinase-like ATPases
SROS_RS23085	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS23090	SM00448	cheY-homologous receiver domain
SROS_RS23090	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS23120	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS23155	SM00028	Tetratricopeptide repeats
SROS_RS23185	SM00382	ATPases associated with a variety of cellular activities
SROS_RS23280	SM00116	Domain in cystathionine beta-synthase and other proteins.
SROS_RS23305	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS23325	SM00831	Cation transporter/ATPase, N-terminus
SROS_RS23330	SM00881	CoA binding domain
SROS_RS23335	SM00116	Domain in cystathionine beta-synthase and other proteins.
SROS_RS23425	SM00831	Cation transporter/ATPase, N-terminus
SROS_RS23445	SM00382	ATPases associated with a variety of cellular activities
SROS_RS23455	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SROS_RS23455	SM00387	Histidine kinase-like ATPases
SROS_RS23460	SM00116	Domain in cystathionine beta-synthase and other proteins.
SROS_RS23465	SM00116	Domain in cystathionine beta-synthase and other proteins.
SROS_RS23490	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS23490	SM00895	SROS_RS23490
SROS_RS23515	SM00382	ATPases associated with a variety of cellular activities
SROS_RS23520	SM00382	ATPases associated with a variety of cellular activities
SROS_RS23555	SM01116	SROS_RS23555
SROS_RS23560	SM00947	Carbonic anhydrase
SROS_RS23575	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SROS_RS23575	SM00245	tail specific protease
SROS_RS23585	SM00382	ATPases associated with a variety of cellular activities
SROS_RS23590	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS23690	SM00354	helix_turn _helix lactose operon repressor
SROS_RS23725	SM00421	helix_turn_helix, Lux Regulon
SROS_RS23780	SM00422	helix_turn_helix, mercury resistance
SROS_RS23800	SM00448	cheY-homologous receiver domain
SROS_RS23800	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS23805	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS23805	SM00387	Histidine kinase-like ATPases
SROS_RS23805	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS23895	SM00382	ATPases associated with a variety of cellular activities
SROS_RS23925	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS23940	SM00421	helix_turn_helix, Lux Regulon
SROS_RS23945	SM00422	helix_turn_helix, mercury resistance
SROS_RS23960	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS23975	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS23975	SM00866	SROS_RS23975
SROS_RS24015	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS24065	SM00756	SROS_RS24065
SROS_RS24080	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS24155	SM00872	Alpha mannosidase, middle domain
SROS_RS24170	SM00354	helix_turn _helix lactose operon repressor
SROS_RS24190	SM00872	Alpha mannosidase, middle domain
SROS_RS24250	SM00028	Tetratricopeptide repeats
SROS_RS24325	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS24330	SM00829	Enoylreductase
SROS_RS24405	SM00422	helix_turn_helix, mercury resistance
SROS_RS24435	SM00422	helix_turn_helix, mercury resistance
SROS_RS24455	SM00382	ATPases associated with a variety of cellular activities
SROS_RS24550	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS24560	SM00382	ATPases associated with a variety of cellular activities
SROS_RS24580	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS24645	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS24655	SM00829	Enoylreductase
SROS_RS24685	SM00382	ATPases associated with a variety of cellular activities
SROS_RS24720	SM00320	WD40 repeats
SROS_RS24735	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS24800	SM00382	ATPases associated with a variety of cellular activities
SROS_RS24800	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS24800	SM01043	Bacterial transcriptional activator domain
SROS_RS24810	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS24850	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS24865	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SROS_RS24915	SM00458	Ricin-type beta-trefoil
SROS_RS24975	SM00849	Metallo-beta-lactamase superfamily
SROS_RS25015	SM00829	Enoylreductase
SROS_RS25025	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS25035	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS25035	SM00895	SROS_RS25035
SROS_RS25040	SM00822	SROS_RS25040
SROS_RS25150	SM00421	helix_turn_helix, Lux Regulon
SROS_RS25220	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS25230	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS25270	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS25295	SM00020	Trypsin-like serine protease
SROS_RS25305	SM00829	Enoylreductase
SROS_RS25345	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS25345	SM01043	Bacterial transcriptional activator domain
SROS_RS25400	SM00382	ATPases associated with a variety of cellular activities
SROS_RS25420	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SROS_RS25440	SM00631	SROS_RS25440
SROS_RS25445	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS25445	SM00419	helix_turn_helix, cAMP Regulatory protein
SROS_RS25520	SM00637	SROS_RS25520
SROS_RS25555	SM00387	Histidine kinase-like ATPases
SROS_RS25560	SM00421	helix_turn_helix, Lux Regulon
SROS_RS25560	SM00448	cheY-homologous receiver domain
SROS_RS25670	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS25730	SM00829	Enoylreductase
SROS_RS25735	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS25755	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS25760	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS25780	SM00028	Tetratricopeptide repeats
SROS_RS25780	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS25815	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS25825	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS25910	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS25915	SM00878	Biotin carboxylase C-terminal domain
SROS_RS25945	SM00382	ATPases associated with a variety of cellular activities
SROS_RS25965	SM00382	ATPases associated with a variety of cellular activities
SROS_RS26010	SM00420	helix_turn_helix, Deoxyribose operon repressor
SROS_RS26010	SM01134	SROS_RS26010
SROS_RS26045	SM00642	Alpha-amylase domain
SROS_RS26065	SM00354	helix_turn _helix lactose operon repressor
SROS_RS26140	SM00710	Parallel beta-helix repeats
SROS_RS26150	SM00873	B3/4 domain
SROS_RS26205	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SROS_RS26230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS26230	SM00387	Histidine kinase-like ATPases
SROS_RS26230	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS26235	SM00448	cheY-homologous receiver domain
SROS_RS26235	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS26260	SM00495	Chitin-binding domain type 3
SROS_RS26285	SM00382	ATPases associated with a variety of cellular activities
SROS_RS26320	SM00822	SROS_RS26320
SROS_RS26355	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS26400	SM00382	ATPases associated with a variety of cellular activities
SROS_RS26405	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS26430	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS26460	SM01060	SROS_RS26460
SROS_RS26480	SM01060	SROS_RS26480
SROS_RS26490	SM00421	helix_turn_helix, Lux Regulon
SROS_RS26490	SM00448	cheY-homologous receiver domain
SROS_RS26510	SM00327	von Willebrand factor (vWF) type A domain
SROS_RS26570	SM00421	helix_turn_helix, Lux Regulon
SROS_RS26595	SM00829	Enoylreductase
SROS_RS26605	SM01321	SROS_RS26605
SROS_RS26615	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SROS_RS26680	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS26790	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS26790	SM00866	SROS_RS26790
SROS_RS26840	SM00382	ATPases associated with a variety of cellular activities
SROS_RS26870	SM00382	ATPases associated with a variety of cellular activities
SROS_RS26880	SM00062	Bacterial periplasmic substrate-binding proteins
SROS_RS26895	SM00923	MbtH-like protein
SROS_RS26900	SM00823	Phosphopantetheine attachment site
SROS_RS26905	SM00823	Phosphopantetheine attachment site
SROS_RS26920	SM00382	ATPases associated with a variety of cellular activities
SROS_RS27040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS27075	SM00382	ATPases associated with a variety of cellular activities
SROS_RS27085	SM00421	helix_turn_helix, Lux Regulon
SROS_RS27085	SM00448	cheY-homologous receiver domain
SROS_RS27095	SM01092	CO dehydrogenase flavoprotein C-terminal domain
SROS_RS27100	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SROS_RS27125	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS27150	SM00487	DEAD-like helicases superfamily
SROS_RS27150	SM00490	helicase superfamily c-terminal domain
SROS_RS27155	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
SROS_RS27175	SM00354	helix_turn _helix lactose operon repressor
SROS_RS27190	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SROS_RS27235	SM00382	ATPases associated with a variety of cellular activities
SROS_RS27240	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS27240	SM00387	Histidine kinase-like ATPases
SROS_RS27240	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS27245	SM00448	cheY-homologous receiver domain
SROS_RS27245	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS27275	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS27305	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS27410	SM00344	helix_turn_helix ASNC type
SROS_RS27455	SM00382	ATPases associated with a variety of cellular activities
SROS_RS27460	SM00382	ATPases associated with a variety of cellular activities
SROS_RS27495	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SROS_RS27505	SM00382	ATPases associated with a variety of cellular activities
SROS_RS27510	SM00382	ATPases associated with a variety of cellular activities
SROS_RS27555	SM00637	SROS_RS27555
SROS_RS27560	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS27565	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS27585	SM00564	beta-propeller repeat
SROS_RS27635	SM00226	Low molecular weight phosphatase family
SROS_RS27640	SM00829	Enoylreductase
SROS_RS27660	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SROS_RS27710	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SROS_RS27725	SM00829	Enoylreductase
SROS_RS27730	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS27810	SM00344	helix_turn_helix ASNC type
SROS_RS27830	SM00382	ATPases associated with a variety of cellular activities
SROS_RS27835	SM00382	ATPases associated with a variety of cellular activities
SROS_RS27855	SM00421	helix_turn_helix, Lux Regulon
SROS_RS27865	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS27865	SM01043	Bacterial transcriptional activator domain
SROS_RS27870	SM00028	Tetratricopeptide repeats
SROS_RS27870	SM00382	ATPases associated with a variety of cellular activities
SROS_RS27870	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS27870	SM01043	Bacterial transcriptional activator domain
SROS_RS27880	SM00644	SROS_RS27880
SROS_RS27910	SM00421	helix_turn_helix, Lux Regulon
SROS_RS27955	SM00421	helix_turn_helix, Lux Regulon
SROS_RS28100	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS28160	SM00344	helix_turn_helix ASNC type
SROS_RS28165	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS28165	SM00387	Histidine kinase-like ATPases
SROS_RS28165	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS28200	SM00331	Sigma factor PP2C-like phosphatases
SROS_RS28205	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SROS_RS28205	SM00475	5'-3' exonuclease
SROS_RS28210	SM00955	SROS_RS28210
SROS_RS28215	SM00487	DEAD-like helicases superfamily
SROS_RS28215	SM00490	helicase superfamily c-terminal domain
SROS_RS28215	SM01142	SROS_RS28215
SROS_RS28220	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SROS_RS28310	SM00382	ATPases associated with a variety of cellular activities
SROS_RS28315	SM00481	DNA polymerase alpha chain like domain
SROS_RS28340	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS28360	SM00327	von Willebrand factor (vWF) type A domain
SROS_RS28360	SM00382	ATPases associated with a variety of cellular activities
SROS_RS28365	SM00855	Phosphoglycerate mutase family
SROS_RS28390	SM00382	ATPases associated with a variety of cellular activities
SROS_RS28420	SM00219	Tyrosine kinase, catalytic domain
SROS_RS28455	SM00387	Histidine kinase-like ATPases
SROS_RS28460	SM00421	helix_turn_helix, Lux Regulon
SROS_RS28460	SM00448	cheY-homologous receiver domain
SROS_RS28485	SM00382	ATPases associated with a variety of cellular activities
SROS_RS28490	SM00382	ATPases associated with a variety of cellular activities
SROS_RS28520	SM01018	B12 binding domain
SROS_RS28545	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS28565	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SROS_RS28580	SM00357	Cold shock protein domain
SROS_RS28605	SM00855	Phosphoglycerate mutase family
SROS_RS28625	SM00822	SROS_RS28625
SROS_RS28665	SM00729	Elongator protein 3, MiaB family, Radical SAM
SROS_RS28715	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS28775	SM00382	ATPases associated with a variety of cellular activities
SROS_RS28790	SM00382	ATPases associated with a variety of cellular activities
SROS_RS28830	SM00487	DEAD-like helicases superfamily
SROS_RS28830	SM00490	helicase superfamily c-terminal domain
SROS_RS28850	SM00382	ATPases associated with a variety of cellular activities
SROS_RS28870	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS28885	SM00382	ATPases associated with a variety of cellular activities
SROS_RS28905	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS28905	SM00895	SROS_RS28905
SROS_RS28920	SM00382	ATPases associated with a variety of cellular activities
SROS_RS28925	SM00382	ATPases associated with a variety of cellular activities
SROS_RS28955	SM01130	SROS_RS28955
SROS_RS28995	SM00861	Transketolase, pyrimidine binding domain
SROS_RS29060	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS29060	SM01043	Bacterial transcriptional activator domain
SROS_RS29080	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS29080	SM00387	Histidine kinase-like ATPases
SROS_RS29085	SM00421	helix_turn_helix, Lux Regulon
SROS_RS29085	SM00448	cheY-homologous receiver domain
SROS_RS29115	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SROS_RS29135	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SROS_RS29135	SM00465	GIY-YIG type nucleases (URI domain)
SROS_RS29150	SM00382	ATPases associated with a variety of cellular activities
SROS_RS29160	SM00849	Metallo-beta-lactamase superfamily
SROS_RS29215	SM00363	S4 RNA-binding domain
SROS_RS29250	SM00849	Metallo-beta-lactamase superfamily
SROS_RS29275	SM00363	S4 RNA-binding domain
SROS_RS29320	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SROS_RS29340	SM00873	B3/4 domain
SROS_RS29340	SM00874	tRNA synthetase B5 domain
SROS_RS29340	SM00896	Ferredoxin-fold anticodon binding domain
SROS_RS29350	SM00091	PAS domain
SROS_RS29350	SM00387	Histidine kinase-like ATPases
SROS_RS29350	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS29355	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SROS_RS29395	SM00732	Likely ribonuclease with RNase H fold.
SROS_RS29400	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SROS_RS29415	SM00382	ATPases associated with a variety of cellular activities
SROS_RS29445	SM00849	Metallo-beta-lactamase superfamily
SROS_RS29460	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SROS_RS29460	SM00954	Region found in RelA / SpoT proteins
SROS_RS29485	SM00382	ATPases associated with a variety of cellular activities
SROS_RS29490	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SROS_RS29525	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS29565	SM00838	Elongation factor G C-terminus
SROS_RS29565	SM00889	Elongation factor G, domain IV
SROS_RS29590	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SROS_RS29595	SM00641	Glycosyl hydrolases family 25
SROS_RS29615	SM00421	helix_turn_helix, Lux Regulon
SROS_RS29615	SM00448	cheY-homologous receiver domain
SROS_RS29645	SM01217	SROS_RS29645
SROS_RS29725	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS29755	SM00421	helix_turn_helix, Lux Regulon
SROS_RS29755	SM00448	cheY-homologous receiver domain
SROS_RS29800	SM00028	Tetratricopeptide repeats
SROS_RS29805	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS29820	SM00354	helix_turn _helix lactose operon repressor
SROS_RS29840	SM00382	ATPases associated with a variety of cellular activities
SROS_RS29845	SM00382	ATPases associated with a variety of cellular activities
SROS_RS29920	SM00354	helix_turn _helix lactose operon repressor
SROS_RS29935	SM00421	helix_turn_helix, Lux Regulon
SROS_RS29935	SM00448	cheY-homologous receiver domain
SROS_RS29950	SM00487	DEAD-like helicases superfamily
SROS_RS29950	SM00490	helicase superfamily c-terminal domain
SROS_RS29970	SM00382	ATPases associated with a variety of cellular activities
SROS_RS30015	SM00421	helix_turn_helix, Lux Regulon
SROS_RS30015	SM00448	cheY-homologous receiver domain
SROS_RS30020	SM00387	Histidine kinase-like ATPases
SROS_RS30050	SM01007	Class II Aldolase and Adducin N-terminal domain
SROS_RS30070	SM00382	ATPases associated with a variety of cellular activities
SROS_RS30080	SM00354	helix_turn _helix lactose operon repressor
SROS_RS30085	SM00320	WD40 repeats
SROS_RS30140	SM00823	Phosphopantetheine attachment site
SROS_RS30170	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SROS_RS30170	SM01232	SROS_RS30170
SROS_RS30175	SM01130	SROS_RS30175
SROS_RS30190	SM00344	helix_turn_helix ASNC type
SROS_RS30300	SM00644	SROS_RS30300
SROS_RS30355	SM00829	Enoylreductase
SROS_RS30375	SM00849	Metallo-beta-lactamase superfamily
SROS_RS30420	SM00382	ATPases associated with a variety of cellular activities
SROS_RS30425	SM00062	Bacterial periplasmic substrate-binding proteins
SROS_RS30455	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SROS_RS30455	SM00481	DNA polymerase alpha chain like domain
SROS_RS30455	SM00483	DNA polymerase X family
SROS_RS30485	SM00421	helix_turn_helix, Lux Regulon
SROS_RS30485	SM00448	cheY-homologous receiver domain
SROS_RS30560	SM00448	cheY-homologous receiver domain
SROS_RS30560	SM00850	LytTr DNA-binding domain
SROS_RS30570	SM00387	Histidine kinase-like ATPases
SROS_RS30615	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS30615	SM00895	SROS_RS30615
SROS_RS30660	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS30665	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SROS_RS30675	SM01321	SROS_RS30675
SROS_RS30705	SM00878	Biotin carboxylase C-terminal domain
SROS_RS30730	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS30760	SM00822	SROS_RS30760
SROS_RS30800	SM00429	ig-like, plexins, transcription factors
SROS_RS30805	SM00198	SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains.
SROS_RS30875	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS30875	SM00387	Histidine kinase-like ATPases
SROS_RS30875	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS30880	SM00448	cheY-homologous receiver domain
SROS_RS30880	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS30925	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS30935	SM00637	SROS_RS30935
SROS_RS30960	SM00878	Biotin carboxylase C-terminal domain
SROS_RS31000	SM00861	Transketolase, pyrimidine binding domain
SROS_RS31065	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS31065	SM01260	SROS_RS31065
SROS_RS31070	SM00382	ATPases associated with a variety of cellular activities
SROS_RS31085	SM00421	helix_turn_helix, Lux Regulon
SROS_RS31085	SM00448	cheY-homologous receiver domain
SROS_RS31100	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS31170	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS31195	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SROS_RS31275	SM00631	SROS_RS31275
SROS_RS31285	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS31295	SM00382	ATPases associated with a variety of cellular activities
SROS_RS31320	SM00984	UDP binding domain
SROS_RS31465	SM00382	ATPases associated with a variety of cellular activities
SROS_RS31470	SM00354	helix_turn _helix lactose operon repressor
SROS_RS31535	SM00487	DEAD-like helicases superfamily
SROS_RS31535	SM00491	SROS_RS31535
SROS_RS31565	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS31640	SM00354	helix_turn _helix lactose operon repressor
SROS_RS31650	SM00824	Thioesterase
SROS_RS31655	SM00923	MbtH-like protein
SROS_RS31660	SM00823	Phosphopantetheine attachment site
SROS_RS31660	SM00824	Thioesterase
SROS_RS31665	SM00823	Phosphopantetheine attachment site
SROS_RS31685	SM00823	Phosphopantetheine attachment site
SROS_RS31685	SM01294	SROS_RS31685
SROS_RS31725	SM00458	Ricin-type beta-trefoil
SROS_RS31780	SM00387	Histidine kinase-like ATPases
SROS_RS31825	SM00354	helix_turn _helix lactose operon repressor
SROS_RS31840	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS31845	SM00382	ATPases associated with a variety of cellular activities
SROS_RS31880	SM00346	helix_turn_helix isocitrate lyase regulation
SROS_RS31915	SM00886	Stress responsive A/B Barrel Domain
SROS_RS31985	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS31985	SM00895	SROS_RS31985
SROS_RS32050	SM00346	helix_turn_helix isocitrate lyase regulation
SROS_RS32065	SM00421	helix_turn_helix, Lux Regulon
SROS_RS32175	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS32200	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS32205	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SROS_RS32215	SM01092	CO dehydrogenase flavoprotein C-terminal domain
SROS_RS32260	SM00482	DNA polymerase A domain
SROS_RS32370	SM00248	ankyrin repeats
SROS_RS32390	SM00642	Alpha-amylase domain
SROS_RS32465	SM00341	Helicase and RNase D C-terminal
SROS_RS32465	SM00474	3'-5' exonuclease
SROS_RS32490	SM00354	helix_turn _helix lactose operon repressor
SROS_RS32520	SM00861	Transketolase, pyrimidine binding domain
SROS_RS32550	SM00382	ATPases associated with a variety of cellular activities
SROS_RS32570	SM00458	Ricin-type beta-trefoil
SROS_RS32590	SM00986	Uracil DNA glycosylase superfamily
SROS_RS32590	SM00987	UreE urease accessory protein, C-terminal domain 
SROS_RS32705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS32705	SM00387	Histidine kinase-like ATPases
SROS_RS32705	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS32710	SM00448	cheY-homologous receiver domain
SROS_RS32710	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS32765	SM00382	ATPases associated with a variety of cellular activities
SROS_RS32775	SM00487	DEAD-like helicases superfamily
SROS_RS32775	SM00490	helicase superfamily c-terminal domain
SROS_RS32785	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS32785	SM01043	Bacterial transcriptional activator domain
SROS_RS32800	SM00947	Carbonic anhydrase
SROS_RS32850	SM00822	SROS_RS32850
SROS_RS32860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS32860	SM00387	Histidine kinase-like ATPases
SROS_RS32860	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS32865	SM00448	cheY-homologous receiver domain
SROS_RS32865	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS32895	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS32900	SM00855	Phosphoglycerate mutase family
SROS_RS32935	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SROS_RS32955	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS32955	SM00387	Histidine kinase-like ATPases
SROS_RS32955	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS32980	SM00354	helix_turn _helix lactose operon repressor
SROS_RS32990	SM00823	Phosphopantetheine attachment site
SROS_RS33005	SM00823	Phosphopantetheine attachment site
SROS_RS33020	SM00923	MbtH-like protein
SROS_RS33025	SM00823	Phosphopantetheine attachment site
SROS_RS33025	SM00824	Thioesterase
SROS_RS33035	SM00861	Transketolase, pyrimidine binding domain
SROS_RS33045	SM00495	Chitin-binding domain type 3
SROS_RS33045	SM00636	SROS_RS33045
SROS_RS33070	SM00382	ATPases associated with a variety of cellular activities
SROS_RS33070	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SROS_RS33145	SM00248	ankyrin repeats
SROS_RS33165	SM00028	Tetratricopeptide repeats
SROS_RS33180	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS33185	SM00382	ATPases associated with a variety of cellular activities
SROS_RS33230	SM00100	Cyclic nucleotide-monophosphate binding domain
SROS_RS33230	SM00419	helix_turn_helix, cAMP Regulatory protein
SROS_RS33250	SM00382	ATPases associated with a variety of cellular activities
SROS_RS33250	SM00487	DEAD-like helicases superfamily
SROS_RS33250	SM00490	helicase superfamily c-terminal domain
SROS_RS33250	SM00847	Helicase associated domain (HA2)  Add an annotation
SROS_RS33255	SM00637	SROS_RS33255
SROS_RS33285	SM00829	Enoylreductase
SROS_RS33290	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS33290	SM01043	Bacterial transcriptional activator domain
SROS_RS33295	SM00354	helix_turn _helix lactose operon repressor
SROS_RS33310	SM00382	ATPases associated with a variety of cellular activities
SROS_RS33340	SM00100	Cyclic nucleotide-monophosphate binding domain
SROS_RS33350	SM01091	Transporter associated domain
SROS_RS33380	SM00458	Ricin-type beta-trefoil
SROS_RS33380	SM00656	SROS_RS33380
SROS_RS33380	SM00710	Parallel beta-helix repeats
SROS_RS33420	SM00642	Alpha-amylase domain
SROS_RS33425	SM00341	Helicase and RNase D C-terminal
SROS_RS33425	SM00487	DEAD-like helicases superfamily
SROS_RS33425	SM00490	helicase superfamily c-terminal domain
SROS_RS33425	SM00956	SROS_RS33425
SROS_RS33485	SM00421	helix_turn_helix, Lux Regulon
SROS_RS33490	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS33495	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS33515	SM00823	Phosphopantetheine attachment site
SROS_RS33580	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS33610	SM00823	Phosphopantetheine attachment site
SROS_RS33615	SM00923	MbtH-like protein
SROS_RS33630	SM00822	SROS_RS33630
SROS_RS33660	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS33740	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS33750	SM00903	Flavin reductase like domain
SROS_RS33760	SM00822	SROS_RS33760
SROS_RS33760	SM00825	Beta-ketoacyl synthase
SROS_RS33760	SM00826	SROS_RS33760
SROS_RS33760	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SROS_RS33825	SM00710	Parallel beta-helix repeats
SROS_RS33840	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS33855	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS33880	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS33905	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS34010	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SROS_RS34025	SM00825	Beta-ketoacyl synthase
SROS_RS34055	SM00028	Tetratricopeptide repeats
SROS_RS34060	SM00450	Rhodanese Homology Domain
SROS_RS34075	SM00881	CoA binding domain
SROS_RS34105	SM00487	DEAD-like helicases superfamily
SROS_RS34105	SM00490	helicase superfamily c-terminal domain
SROS_RS34130	SM00434	DNA Topoisomerase IV
SROS_RS34145	SM00947	Carbonic anhydrase
SROS_RS34150	SM00387	Histidine kinase-like ATPases
SROS_RS34150	SM00433	TopoisomeraseII
SROS_RS34175	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SROS_RS34175	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SROS_RS34175	SM00091	PAS domain
SROS_RS34175	SM00331	Sigma factor PP2C-like phosphatases
SROS_RS34195	SM00796	Allophanate hydrolase subunit 1
SROS_RS34200	SM00797	Allophanate hydrolase subunit 2
SROS_RS34215	SM00382	ATPases associated with a variety of cellular activities
SROS_RS34230	SM00382	ATPases associated with a variety of cellular activities
SROS_RS34285	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS34285	SM00320	WD40 repeats
SROS_RS34325	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS34330	SM00450	Rhodanese Homology Domain
SROS_RS34370	SM00257	Lysin motif
SROS_RS34385	SM00060	Fibronectin type 3 domain
SROS_RS34385	SM00636	SROS_RS34385
SROS_RS34400	SM00889	Elongation factor G, domain IV
SROS_RS34450	SM00382	ATPases associated with a variety of cellular activities
SROS_RS34475	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS34490	SM00382	ATPases associated with a variety of cellular activities
SROS_RS34500	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS34510	SM00871	Bacterial transcription activator, effector binding domain
SROS_RS34515	SM00116	Domain in cystathionine beta-synthase and other proteins.
SROS_RS34515	SM01240	SROS_RS34515
SROS_RS34550	SM00354	helix_turn _helix lactose operon repressor
SROS_RS34575	SM00822	SROS_RS34575
SROS_RS34630	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS34630	SM00320	WD40 repeats
SROS_RS34670	SM00382	ATPases associated with a variety of cellular activities
SROS_RS34710	SM00382	ATPases associated with a variety of cellular activities
SROS_RS34715	SM00382	ATPases associated with a variety of cellular activities
SROS_RS34735	SM00421	helix_turn_helix, Lux Regulon
SROS_RS34735	SM00448	cheY-homologous receiver domain
SROS_RS34745	SM00327	von Willebrand factor (vWF) type A domain
SROS_RS34765	SM00382	ATPases associated with a variety of cellular activities
SROS_RS34795	SM00093	SERine  Proteinase INhibitors
SROS_RS34830	SM00422	helix_turn_helix, mercury resistance
SROS_RS34830	SM00871	Bacterial transcription activator, effector binding domain
SROS_RS34860	SM00382	ATPases associated with a variety of cellular activities
SROS_RS34875	SM00422	helix_turn_helix, mercury resistance
SROS_RS34955	SM00448	cheY-homologous receiver domain
SROS_RS34955	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS34960	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS34960	SM00387	Histidine kinase-like ATPases
SROS_RS34960	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS34975	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS34975	SM01043	Bacterial transcriptional activator domain
SROS_RS34985	SM00855	Phosphoglycerate mutase family
SROS_RS35005	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS35030	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
SROS_RS35050	SM00316	Ribosomal protein S1-like RNA-binding domain
SROS_RS35060	SM00729	Elongator protein 3, MiaB family, Radical SAM
SROS_RS35105	SM00562	SROS_RS35105
SROS_RS35145	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS35145	SM00866	SROS_RS35145
SROS_RS35150	SM00382	ATPases associated with a variety of cellular activities
SROS_RS35150	SM00994	ClpX C4-type zinc finger
SROS_RS35150	SM01086	C-terminal, D2-small domain, of ClpB protein
SROS_RS35170	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS35210	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SROS_RS35210	SM00331	Sigma factor PP2C-like phosphatases
SROS_RS35215	SM00421	helix_turn_helix, Lux Regulon
SROS_RS35215	SM00448	cheY-homologous receiver domain
SROS_RS35245	SM00420	helix_turn_helix, Deoxyribose operon repressor
SROS_RS35245	SM01134	SROS_RS35245
SROS_RS35260	SM00320	WD40 repeats
SROS_RS35275	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS35280	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SROS_RS35285	SM00421	helix_turn_helix, Lux Regulon
SROS_RS35285	SM00448	cheY-homologous receiver domain
SROS_RS35290	SM00331	Sigma factor PP2C-like phosphatases
SROS_RS35380	SM00834	Putative regulatory protein
SROS_RS35390	SM00507	HNH nucleases
SROS_RS35400	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS35440	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS35455	SM00028	Tetratricopeptide repeats
SROS_RS35485	SM00642	Alpha-amylase domain
SROS_RS35495	SM00382	ATPases associated with a variety of cellular activities
SROS_RS35500	SM00267	diguanylate cyclase
SROS_RS35515	SM00382	ATPases associated with a variety of cellular activities
SROS_RS35560	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS35560	SM00895	SROS_RS35560
SROS_RS35585	SM00382	ATPases associated with a variety of cellular activities
SROS_RS35590	SM00421	helix_turn_helix, Lux Regulon
SROS_RS35590	SM00448	cheY-homologous receiver domain
SROS_RS35605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS35605	SM00866	SROS_RS35605
SROS_RS35625	SM00382	ATPases associated with a variety of cellular activities
SROS_RS35635	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS35640	SM00829	Enoylreductase
SROS_RS35655	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS35675	SM00382	ATPases associated with a variety of cellular activities
SROS_RS35685	SM00563	Phosphate acyltransferases
SROS_RS35820	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS35820	SM00419	helix_turn_helix, cAMP Regulatory protein
SROS_RS35840	SM00860	SMI1 / KNR4 family
SROS_RS35845	SM00636	SROS_RS35845
SROS_RS35870	SM00560	LamG-like jellyroll fold domain
SROS_RS35885	SM00382	ATPases associated with a variety of cellular activities
SROS_RS35890	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS35890	SM01260	SROS_RS35890
SROS_RS35905	SM00382	ATPases associated with a variety of cellular activities
SROS_RS35910	SM00382	ATPases associated with a variety of cellular activities
SROS_RS35980	SM00382	ATPases associated with a variety of cellular activities
SROS_RS35985	SM00382	ATPases associated with a variety of cellular activities
SROS_RS36060	SM00382	ATPases associated with a variety of cellular activities
SROS_RS36070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS36070	SM00895	SROS_RS36070
SROS_RS36100	SM00346	helix_turn_helix isocitrate lyase regulation
SROS_RS36120	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS36135	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS36170	SM01230	SROS_RS36170
SROS_RS36185	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS36215	SM00829	Enoylreductase
SROS_RS36230	SM00382	ATPases associated with a variety of cellular activities
SROS_RS36235	SM00382	ATPases associated with a variety of cellular activities
SROS_RS36275	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS36275	SM00895	SROS_RS36275
SROS_RS36300	SM01130	SROS_RS36300
SROS_RS36320	SM00382	ATPases associated with a variety of cellular activities
SROS_RS36365	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS36405	SM00331	Sigma factor PP2C-like phosphatases
SROS_RS36405	SM00387	Histidine kinase-like ATPases
SROS_RS36405	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS36405	SM00448	cheY-homologous receiver domain
SROS_RS36410	SM00054	EF-hand, calcium binding motif
SROS_RS36440	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS36450	SM00487	DEAD-like helicases superfamily
SROS_RS36500	SM00637	SROS_RS36500
SROS_RS36505	SM00637	SROS_RS36505
SROS_RS36580	SM00867	YceI-like domain 
SROS_RS36585	SM00450	Rhodanese Homology Domain
SROS_RS36590	SM00849	Metallo-beta-lactamase superfamily
SROS_RS36600	SM00382	ATPases associated with a variety of cellular activities
SROS_RS36620	SM00060	Fibronectin type 3 domain
SROS_RS36620	SM00636	SROS_RS36620
SROS_RS36620	SM00637	SROS_RS36620
SROS_RS36640	SM00316	Ribosomal protein S1-like RNA-binding domain
SROS_RS36640	SM00732	Likely ribonuclease with RNase H fold.
SROS_RS36655	SM00773	Proposed nucleic acid binding domain
SROS_RS36675	SM00422	helix_turn_helix, mercury resistance
SROS_RS36695	SM00421	helix_turn_helix, Lux Regulon
SROS_RS36695	SM00448	cheY-homologous receiver domain
SROS_RS36770	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS36820	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS36820	SM01043	Bacterial transcriptional activator domain
SROS_RS36850	SM00062	Bacterial periplasmic substrate-binding proteins
SROS_RS36860	SM00382	ATPases associated with a variety of cellular activities
SROS_RS36870	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS36870	SM00895	SROS_RS36870
SROS_RS36880	SM00829	Enoylreductase
SROS_RS36885	SM00829	Enoylreductase
SROS_RS36900	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SROS_RS36915	SM00327	von Willebrand factor (vWF) type A domain
SROS_RS37010	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS37040	SM00479	SROS_RS37040
SROS_RS37050	SM00421	helix_turn_helix, Lux Regulon
SROS_RS37145	SM00822	SROS_RS37145
SROS_RS37170	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS37205	SM01007	Class II Aldolase and Adducin N-terminal domain
SROS_RS37225	SM00960	Roadblock/LC7 domain
SROS_RS37255	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS37285	SM00346	helix_turn_helix isocitrate lyase regulation
SROS_RS37335	SM00382	ATPases associated with a variety of cellular activities
SROS_RS37370	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS37380	SM00382	ATPases associated with a variety of cellular activities
SROS_RS37445	SM00382	ATPases associated with a variety of cellular activities
SROS_RS37485	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS37575	SM01007	Class II Aldolase and Adducin N-terminal domain
SROS_RS37580	SM00957	SecA DEAD-like domain
SROS_RS37580	SM00958	SecA preprotein cross-linking domain
SROS_RS37605	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS37635	SM00382	ATPases associated with a variety of cellular activities
SROS_RS37695	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS37715	SM00382	ATPases associated with a variety of cellular activities
SROS_RS37740	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS37760	SM00487	DEAD-like helicases superfamily
SROS_RS37760	SM00490	helicase superfamily c-terminal domain
SROS_RS37765	SM00487	DEAD-like helicases superfamily
SROS_RS37765	SM00490	helicase superfamily c-terminal domain
SROS_RS37790	SM00487	DEAD-like helicases superfamily
SROS_RS37790	SM00490	helicase superfamily c-terminal domain
SROS_RS37810	SM00481	DNA polymerase alpha chain like domain
SROS_RS37820	SM00420	helix_turn_helix, Deoxyribose operon repressor
SROS_RS37820	SM01134	SROS_RS37820
SROS_RS37855	SM01230	SROS_RS37855
SROS_RS37870	SM00495	Chitin-binding domain type 3
SROS_RS37875	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS37895	SM00344	helix_turn_helix ASNC type
SROS_RS37905	SM01266	SROS_RS37905
SROS_RS37945	SM00644	SROS_RS37945
SROS_RS37995	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS37995	SM01043	Bacterial transcriptional activator domain
SROS_RS38085	SM00822	SROS_RS38085
SROS_RS38110	SM00495	Chitin-binding domain type 3
SROS_RS38120	SM00829	Enoylreductase
SROS_RS38130	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
SROS_RS38130	SM00231	Coagulation factor 5/8 C-terminal domain, discoidin domain
SROS_RS38130	SM00606	Cellulose Binding Domain Type IV
SROS_RS38160	SM00829	Enoylreductase
SROS_RS38175	SM00354	helix_turn _helix lactose operon repressor
SROS_RS38200	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS38215	SM00882	Coenzyme A transferase
SROS_RS38220	SM00882	Coenzyme A transferase
SROS_RS38230	SM00998	Adenylosuccinate lyase C-terminus
SROS_RS38240	SM00346	helix_turn_helix isocitrate lyase regulation
SROS_RS38245	SM00354	helix_turn _helix lactose operon repressor
SROS_RS38255	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS38275	SM00458	Ricin-type beta-trefoil
SROS_RS38285	SM00028	Tetratricopeptide repeats
SROS_RS38285	SM00421	helix_turn_helix, Lux Regulon
SROS_RS38295	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SROS_RS38300	SM00382	ATPases associated with a variety of cellular activities
SROS_RS38310	SM00422	helix_turn_helix, mercury resistance
SROS_RS38340	SM00422	helix_turn_helix, mercury resistance
SROS_RS38430	SM00838	Elongation factor G C-terminus
SROS_RS38500	SM00382	ATPases associated with a variety of cellular activities
SROS_RS38505	SM00382	ATPases associated with a variety of cellular activities
SROS_RS38505	SM00962	SRP54-type protein, GTPase domain
SROS_RS38505	SM00963	SRP54-type protein, helical bundle domain
SROS_RS38510	SM00968	SMC proteins Flexible Hinge Domain
SROS_RS38530	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SROS_RS38530	SM01232	SROS_RS38530
SROS_RS38535	SM00358	Double-stranded RNA binding motif
SROS_RS38535	SM00535	Ribonuclease III family
SROS_RS38560	SM00487	DEAD-like helicases superfamily
SROS_RS38560	SM00490	helicase superfamily c-terminal domain
SROS_RS38565	SM01120	SROS_RS38565
SROS_RS38565	SM01121	SROS_RS38565
SROS_RS38615	SM00563	Phosphate acyltransferases
SROS_RS38635	SM00411	bacterial (prokaryotic) histone like domain
SROS_RS38650	SM00346	helix_turn_helix isocitrate lyase regulation
SROS_RS38745	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS38760	SM00917	LeuA allosteric (dimerisation) domain
SROS_RS38780	SM01329	SROS_RS38780
SROS_RS38820	SM00382	ATPases associated with a variety of cellular activities
SROS_RS38830	SM00240	Forkhead associated domain
SROS_RS38865	SM00052	Putative diguanylate phosphodiesterase
SROS_RS38865	SM00091	PAS domain
SROS_RS38865	SM00267	diguanylate cyclase
SROS_RS38885	SM00448	cheY-homologous receiver domain
SROS_RS38890	SM00091	PAS domain
SROS_RS38890	SM00387	Histidine kinase-like ATPases
SROS_RS38920	SM00845	GatB domain
SROS_RS38945	SM00052	Putative diguanylate phosphodiesterase
SROS_RS38945	SM00267	diguanylate cyclase
SROS_RS38950	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SROS_RS38950	SM00292	breast cancer carboxy-terminal domain
SROS_RS38950	SM00532	Ligase N family
SROS_RS38965	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS38970	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS39070	SM00382	ATPases associated with a variety of cellular activities
SROS_RS39095	SM00849	Metallo-beta-lactamase superfamily
SROS_RS39125	SM00893	Electron transfer flavoprotein domain
SROS_RS39130	SM00893	Electron transfer flavoprotein domain
SROS_RS39135	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS39200	SM00382	ATPases associated with a variety of cellular activities
SROS_RS39240	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS39250	SM00644	SROS_RS39250
SROS_RS39260	SM00642	Alpha-amylase domain
SROS_RS39265	SM00642	Alpha-amylase domain
SROS_RS39275	SM00631	SROS_RS39275
SROS_RS39295	SM00421	helix_turn_helix, Lux Regulon
SROS_RS39295	SM00448	cheY-homologous receiver domain
SROS_RS39315	SM00422	helix_turn_helix, mercury resistance
SROS_RS39340	SM00382	ATPases associated with a variety of cellular activities
SROS_RS39355	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS39400	SM00642	Alpha-amylase domain
SROS_RS39410	SM00636	SROS_RS39410
SROS_RS39410	SM00637	SROS_RS39410
SROS_RS39435	SM00903	Flavin reductase like domain
SROS_RS39460	SM00382	ATPases associated with a variety of cellular activities
SROS_RS39480	SM00344	helix_turn_helix ASNC type
SROS_RS39495	SM00382	ATPases associated with a variety of cellular activities
SROS_RS39515	SM00421	helix_turn_helix, Lux Regulon
SROS_RS39570	SM00849	Metallo-beta-lactamase superfamily
SROS_RS39575	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS39575	SM00895	SROS_RS39575
SROS_RS39580	SM00344	helix_turn_helix ASNC type
SROS_RS39590	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS39620	SM00382	ATPases associated with a variety of cellular activities
SROS_RS39635	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SROS_RS39760	SM00855	Phosphoglycerate mutase family
SROS_RS39765	SM00420	helix_turn_helix, Deoxyribose operon repressor
SROS_RS39765	SM01134	SROS_RS39765
SROS_RS39780	SM00421	helix_turn_helix, Lux Regulon
SROS_RS39780	SM00448	cheY-homologous receiver domain
SROS_RS39785	SM00387	Histidine kinase-like ATPases
SROS_RS39835	SM00829	Enoylreductase
SROS_RS39860	SM00382	ATPases associated with a variety of cellular activities
SROS_RS39885	SM00822	SROS_RS39885
SROS_RS39915	SM00903	Flavin reductase like domain
SROS_RS39935	SM00382	ATPases associated with a variety of cellular activities
SROS_RS39945	SM00849	Metallo-beta-lactamase superfamily
SROS_RS39955	SM00637	SROS_RS39955
SROS_RS39965	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS39970	SM00873	B3/4 domain
SROS_RS39975	SM00861	Transketolase, pyrimidine binding domain
SROS_RS39995	SM00829	Enoylreductase
SROS_RS40040	SM00919	Malic enzyme, NAD binding domain
SROS_RS40040	SM01274	SROS_RS40040
SROS_RS40075	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SROS_RS40085	SM00387	Histidine kinase-like ATPases
SROS_RS40095	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS40095	SM00866	SROS_RS40095
SROS_RS40105	SM00729	Elongator protein 3, MiaB family, Radical SAM
SROS_RS40105	SM00876	Biotin and Thiamin Synthesis associated domain
SROS_RS40140	SM00878	Biotin carboxylase C-terminal domain
SROS_RS40150	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SROS_RS40215	SM00382	ATPases associated with a variety of cellular activities
SROS_RS40220	SM00448	cheY-homologous receiver domain
SROS_RS40220	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS40235	SM00344	helix_turn_helix ASNC type
SROS_RS40290	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SROS_RS40365	SM00341	Helicase and RNase D C-terminal
SROS_RS40385	SM01209	SROS_RS40385
SROS_RS40485	SM00450	Rhodanese Homology Domain
SROS_RS40500	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
SROS_RS40525	SM00487	DEAD-like helicases superfamily
SROS_RS40525	SM00490	helicase superfamily c-terminal domain
SROS_RS40545	SM00849	Metallo-beta-lactamase superfamily
SROS_RS40600	SM00924	MgtE intracellular N domain
SROS_RS40610	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS40625	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SROS_RS40705	SM00422	helix_turn_helix, mercury resistance
SROS_RS40815	SM00382	ATPases associated with a variety of cellular activities
SROS_RS40855	SM00331	Sigma factor PP2C-like phosphatases
SROS_RS40855	SM00448	cheY-homologous receiver domain
SROS_RS40860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS40860	SM00387	Histidine kinase-like ATPases
SROS_RS40860	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS40865	SM00448	cheY-homologous receiver domain
SROS_RS40920	SM00382	ATPases associated with a variety of cellular activities
SROS_RS41035	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS41080	SM00829	Enoylreductase
SROS_RS41100	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS41105	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS41125	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SROS_RS41155	SM00448	cheY-homologous receiver domain
SROS_RS41155	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS41160	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS41160	SM00387	Histidine kinase-like ATPases
SROS_RS41160	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS41270	SM00344	helix_turn_helix ASNC type
SROS_RS41320	SM00382	ATPases associated with a variety of cellular activities
SROS_RS41335	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS41345	SM00897	FIST N domain
SROS_RS41345	SM01204	SROS_RS41345
SROS_RS41355	SM00327	von Willebrand factor (vWF) type A domain
SROS_RS41385	SM00116	Domain in cystathionine beta-synthase and other proteins.
SROS_RS41440	SM00986	Uracil DNA glycosylase superfamily
SROS_RS41440	SM00987	UreE urease accessory protein, C-terminal domain 
SROS_RS41465	SM01192	SROS_RS41465
SROS_RS41465	SM01193	SROS_RS41465
SROS_RS41485	SM00487	DEAD-like helicases superfamily
SROS_RS41485	SM00490	helicase superfamily c-terminal domain
SROS_RS41485	SM00982	SROS_RS41485
SROS_RS41485	SM01058	CarD-like/TRCF domain
SROS_RS41590	SM01400	SROS_RS41590
SROS_RS41620	SM00855	Phosphoglycerate mutase family
SROS_RS41625	SM00880	SROS_RS41625
SROS_RS41625	SM01118	SROS_RS41625
SROS_RS41635	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS41640	SM00382	ATPases associated with a variety of cellular activities
SROS_RS41650	SM00650	Ribosomal RNA adenine dimethylases
SROS_RS41660	SM00191	Integrin alpha (beta-propellor repeats).
SROS_RS41715	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS41745	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS41760	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS41790	SM00852	Probable molybdopterin binding domain
SROS_RS41800	SM00852	Probable molybdopterin binding domain
SROS_RS41830	SM00858	SROS_RS41830
SROS_RS41890	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS41920	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS41970	SM00490	helicase superfamily c-terminal domain
SROS_RS42030	SM00822	SROS_RS42030
SROS_RS42040	SM00421	helix_turn_helix, Lux Regulon
SROS_RS42070	SM00421	helix_turn_helix, Lux Regulon
SROS_RS42085	SM00020	Trypsin-like serine protease
SROS_RS42110	SM00421	helix_turn_helix, Lux Regulon
SROS_RS42110	SM00448	cheY-homologous receiver domain
SROS_RS42115	SM00387	Histidine kinase-like ATPases
SROS_RS42120	SM00231	Coagulation factor 5/8 C-terminal domain, discoidin domain
SROS_RS42135	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS42145	SM00642	Alpha-amylase domain
SROS_RS42160	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS42165	SM00331	Sigma factor PP2C-like phosphatases
SROS_RS42185	SM00867	YceI-like domain 
SROS_RS42205	SM00382	ATPases associated with a variety of cellular activities
SROS_RS42210	SM00382	ATPases associated with a variety of cellular activities
SROS_RS42270	SM00487	DEAD-like helicases superfamily
SROS_RS42270	SM00490	helicase superfamily c-terminal domain
SROS_RS42275	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS42310	SM00448	cheY-homologous receiver domain
SROS_RS42310	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS42315	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS42315	SM00387	Histidine kinase-like ATPases
SROS_RS42315	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS42390	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS42410	SM00387	Histidine kinase-like ATPases
SROS_RS42430	SM00382	ATPases associated with a variety of cellular activities
SROS_RS42435	SM00919	Malic enzyme, NAD binding domain
SROS_RS42435	SM00996	S-adenosyl-L-homocysteine hydrolase
SROS_RS42435	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
SROS_RS42440	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
SROS_RS42455	SM00421	helix_turn_helix, Lux Regulon
SROS_RS42455	SM00448	cheY-homologous receiver domain
SROS_RS42480	SM00421	helix_turn_helix, Lux Regulon
SROS_RS42480	SM00448	cheY-homologous receiver domain
SROS_RS42485	SM00421	helix_turn_helix, Lux Regulon
SROS_RS42485	SM00448	cheY-homologous receiver domain
SROS_RS42490	SM00387	Histidine kinase-like ATPases
SROS_RS42525	SM00642	Alpha-amylase domain
SROS_RS42545	SM00054	EF-hand, calcium binding motif
SROS_RS42555	SM00829	Enoylreductase
SROS_RS42560	SM00822	SROS_RS42560
SROS_RS42560	SM00823	Phosphopantetheine attachment site
SROS_RS42560	SM00825	Beta-ketoacyl synthase
SROS_RS42560	SM00826	SROS_RS42560
SROS_RS42560	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SROS_RS42640	SM00346	helix_turn_helix isocitrate lyase regulation
SROS_RS42670	SM00382	ATPases associated with a variety of cellular activities
SROS_RS42685	SM00421	helix_turn_helix, Lux Regulon
SROS_RS42730	SM00244	prohibitin homologues
SROS_RS42740	SM00829	Enoylreductase
SROS_RS42755	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS42755	SM01043	Bacterial transcriptional activator domain
SROS_RS42770	SM00382	ATPases associated with a variety of cellular activities
SROS_RS42805	SM00422	helix_turn_helix, mercury resistance
SROS_RS42830	SM00448	cheY-homologous receiver domain
SROS_RS42830	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS42845	SM00382	ATPases associated with a variety of cellular activities
SROS_RS42860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS42860	SM00387	Histidine kinase-like ATPases
SROS_RS42860	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS42865	SM00448	cheY-homologous receiver domain
SROS_RS42865	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS42910	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS42950	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS42975	SM00357	Cold shock protein domain
SROS_RS43000	SM00487	DEAD-like helicases superfamily
SROS_RS43000	SM00490	helicase superfamily c-terminal domain
SROS_RS43020	SM00357	Cold shock protein domain
SROS_RS43115	SM00382	ATPases associated with a variety of cellular activities
SROS_RS43120	SM00382	ATPases associated with a variety of cellular activities
SROS_RS43145	SM00382	ATPases associated with a variety of cellular activities
SROS_RS43185	SM00836	DALR anticodon binding domain
SROS_RS43185	SM01016	Arginyl tRNA synthetase N terminal dom
SROS_RS43245	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SROS_RS43315	SM00788	Adenylosuccinate synthetase
SROS_RS43325	SM00886	Stress responsive A/B Barrel Domain
SROS_RS43335	SM00382	ATPases associated with a variety of cellular activities
SROS_RS43345	SM00861	Transketolase, pyrimidine binding domain
SROS_RS43365	SM01211	SROS_RS43365
SROS_RS43385	SM00100	Cyclic nucleotide-monophosphate binding domain
SROS_RS43385	SM00419	helix_turn_helix, cAMP Regulatory protein
SROS_RS43450	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SROS_RS43470	SM00354	helix_turn _helix lactose operon repressor
SROS_RS43480	SM00646	SROS_RS43480
SROS_RS43505	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SROS_RS43505	SM01012	SROS_RS43505
SROS_RS43520	SM00014	Acid phosphatase homologues
SROS_RS43525	SM00014	Acid phosphatase homologues
SROS_RS43585	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS43610	SM00382	ATPases associated with a variety of cellular activities
SROS_RS43630	SM00867	YceI-like domain 
SROS_RS43675	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS43690	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS43765	SM00479	SROS_RS43765
SROS_RS43815	SM00849	Metallo-beta-lactamase superfamily
SROS_RS43875	SM00422	helix_turn_helix, mercury resistance
SROS_RS43890	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS43895	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS43895	SM00866	SROS_RS43895
SROS_RS43920	SM01067	Cellulose binding domain
SROS_RS43985	SM00382	ATPases associated with a variety of cellular activities
SROS_RS44015	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SROS_RS44030	SM00346	helix_turn_helix isocitrate lyase regulation
SROS_RS44040	SM00866	SROS_RS44040
SROS_RS44045	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS44045	SM00866	SROS_RS44045
SROS_RS44075	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS44075	SM00866	SROS_RS44075
SROS_RS44135	SM00422	helix_turn_helix, mercury resistance
SROS_RS44145	SM00382	ATPases associated with a variety of cellular activities
SROS_RS44160	SM00478	endonuclease III
SROS_RS44160	SM00525	SROS_RS44160
SROS_RS44170	SM00382	ATPases associated with a variety of cellular activities
SROS_RS44170	SM01086	C-terminal, D2-small domain, of ClpB protein
SROS_RS44195	SM00421	helix_turn_helix, Lux Regulon
SROS_RS44280	SM00905	Dihydroneopterin aldolase
SROS_RS44300	SM00382	ATPases associated with a variety of cellular activities
SROS_RS44350	SM00382	ATPases associated with a variety of cellular activities
SROS_RS44385	SM00347	helix_turn_helix multiple antibiotic resistance protein
SROS_RS44425	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS44525	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SROS_RS44525	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SROS_RS44525	SM00493	SROS_RS44525
SROS_RS44685	SM00382	ATPases associated with a variety of cellular activities
SROS_RS44705	SM00421	helix_turn_helix, Lux Regulon
SROS_RS44710	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SROS_RS44710	SM00387	Histidine kinase-like ATPases
SROS_RS44710	SM00388	His Kinase A (phosphoacceptor) domain
SROS_RS44720	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS44725	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS44785	SM00382	ATPases associated with a variety of cellular activities
SROS_RS44820	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS44870	SM00028	Tetratricopeptide repeats
SROS_RS44870	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS44870	SM01043	Bacterial transcriptional activator domain
SROS_RS44950	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SROS_RS44965	SM00493	SROS_RS44965
SROS_RS44975	SM00382	ATPases associated with a variety of cellular activities
SROS_RS45035	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS45040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS45040	SM00895	SROS_RS45040
SROS_RS45045	SM00480	DNA polymerase III beta subunit
SROS_RS45050	SM00421	helix_turn_helix, Lux Regulon
SROS_RS45050	SM00448	cheY-homologous receiver domain
SROS_RS45055	SM00421	helix_turn_helix, Lux Regulon
SROS_RS45055	SM00448	cheY-homologous receiver domain
SROS_RS45065	SM00382	ATPases associated with a variety of cellular activities
SROS_RS45080	SM00822	SROS_RS45080
SROS_RS45090	SM00344	helix_turn_helix ASNC type
SROS_RS45100	SM00829	Enoylreductase
SROS_RS45110	SM00342	helix_turn_helix, arabinose operon control protein
SROS_RS45155	SM00382	ATPases associated with a variety of cellular activities
SROS_RS45165	SM00062	Bacterial periplasmic substrate-binding proteins
SROS_RS45165	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
SROS_RS45200	SM00518	AP endonuclease family 2
SROS_RS45245	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SROS_RS45315	SM00470	ParB-like nuclease domain
SROS_RS45330	SM00393	Putative single-stranded nucleic acids-binding domain
SROS_RS45525	SM00318	Staphylococcal nuclease homologues
SROS_RS45525	SM00894	Excalibur calcium-binding domain
SROS_RS45530	SM00320	WD40 repeats
SROS_RS45535	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS45555	SM00421	helix_turn_helix, Lux Regulon
SROS_RS45580	SM00028	Tetratricopeptide repeats
SROS_RS45580	SM00255	Toll - interleukin 1 - resistance
SROS_RS45585	SM00387	Histidine kinase-like ATPases
SROS_RS45620	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS45660	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS45660	SM00320	WD40 repeats
SROS_RS45720	SM00062	Bacterial periplasmic substrate-binding proteins
SROS_RS45745	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS45745	SM00564	beta-propeller repeat
SROS_RS45750	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS45760	SM00028	Tetratricopeptide repeats
SROS_RS45765	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS45770	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS45810	SM00530	Helix-turn-helix XRE-family like proteins 
SROS_RS45825	SM00740	SROS_RS45825
SROS_RS45835	SM00422	helix_turn_helix, mercury resistance
SROS_RS45875	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS45890	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS45890	SM00320	WD40 repeats
SROS_RS45895	SM00860	SMI1 / KNR4 family
SROS_RS45925	SM00422	helix_turn_helix, mercury resistance
SROS_RS45940	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS45955	SM00567	E-Z type HEAT repeats
SROS_RS45985	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS45985	SM00866	SROS_RS45985
SROS_RS46005	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS46030	SM00231	Coagulation factor 5/8 C-terminal domain, discoidin domain
SROS_RS46090	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS46090	SM00320	WD40 repeats
SROS_RS46110	SM00607	eel-Fucolectin Tachylectin-4 Pentaxrin-1 Domain
SROS_RS46110	SM00812	Alpha-L-fucosidase
SROS_RS46145	SM00560	LamG-like jellyroll fold domain
SROS_RS46160	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS46210	SM00860	SMI1 / KNR4 family
SROS_RS46260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS46260	SM00895	SROS_RS46260
SROS_RS46270	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS46285	SM01323	SROS_RS46285
SROS_RS46295	SM00567	E-Z type HEAT repeats
SROS_RS46345	SM00903	Flavin reductase like domain
SROS_RS46365	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS46375	SM00823	Phosphopantetheine attachment site
SROS_RS46375	SM01294	SROS_RS46375
SROS_RS46400	SM00062	Bacterial periplasmic substrate-binding proteins
SROS_RS46450	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS46465	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SROS_RS46465	SM00895	SROS_RS46465
SROS_RS46485	SM00387	Histidine kinase-like ATPases
SROS_RS46520	SM00028	Tetratricopeptide repeats
SROS_RS46520	SM00862	Transcriptional regulatory protein, C terminal
SROS_RS46520	SM01043	Bacterial transcriptional activator domain
SROS_RS46525	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS46525	SM00924	MgtE intracellular N domain
SROS_RS46600	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS46620	SM00320	WD40 repeats
SROS_RS46635	SM00822	SROS_RS46635
SROS_RS46635	SM00825	Beta-ketoacyl synthase
SROS_RS46635	SM00826	SROS_RS46635
SROS_RS46645	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS46645	SM00740	SROS_RS46645
SROS_RS46695	SM00220	Serine/Threonine protein kinases, catalytic domain
SROS_RS46730	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SROS_RS46745	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
