        recF NONE
        gyrB    6619 ..    6650 + -18.2  -3.89822   CGCTGCTCTGCGGTC      TAAAGACACCCTGC CCTG GCAGGGTGTCTTTG       TTTATAGGCTCGCTC 100 54
        ahpF    8363 ..    8387 +   -10  -5.08824   AGCGGCATGAAAAAA         GGGAGCGGACC GCAA GG-CTGCTCCC          TTTTTTGCCTGACCA 100 49
CL52_RS00055 NONE
CL52_RS00060 NONE
CL52_RS00065   16172 ..   16192 +  -6.7  -3.53012   GCTGTCACCGGCGGC            CTGCATGGC CTT GCCCAGCAG            TTTCCAGGCCGCCGA  58 168
CL52_RS00115   25350 ..   25373 + -19.6  -2.90496   TCCCTGATCGATCCC          CGAGCCCCGC TGAT GCGGGGCTCG           TACTTTAAAGGCCGG  93 34
        dprA NONE
CL52_RS00125   27581 ..   27593 +  -6.2  -4.07568   GGCCCCCAGTGACTT                GGCC CGTTC GGCC                TTTTCCGCGGAACCG  66 471
        hemF   29193 ..   29235 +  -3.4  -4.81551   AACGCCGGCGGGCTT GAATCGGGTGCAATCAAGAA TGA TTCTTGAGCTCGCTCAATTC TTTTTCATGTCGATG  73 39
CL52_RS00140   29688 ..   29699 +  -7.2  -3.09878   TCGCCGCTCGCCTAA                CGCC TGCC GGCG                 TCTTCCCTGCCTGCA  54 26
CL52_RS00145 NONE
CL52_RS00150 NONE
        aroE   34379 ..   34394 +  -4.6  -3.10796   ATGTTGCGTGTCGTC              GCTGGC GCGA GCCAGG               TCTTCGATGCTCAGC  47 140
        pbpG   36819 ..   36831 + -10.5  -2.53715   AGAGCCAGAACACCA                CGCCC AGC GGGCG                CTTGATCATCATGAA  57 471
CL52_RS00185   39238 ..   39262 +  -8.6  -3.16564   GATGCGCGAGGCCAG         CGCGGTGTTGC GGTA GTA-CACCGCG          TTGATCGGCTGGCGC  56 92
CL52_RS00195   41645 ..   41655 +  -2.4  -3.53012   AGCAGCGCCGGCTCG                 CCGG TGA CCAG                 TTTGCGCACCCAGGC  48 308
         dgt NONE
CL52_RS20965 NONE
CL52_RS00205 NONE
CL52_RS00210   45828 ..   45859 + -12.9  -2.83271   GGCTGCCAGCCATGG      CGCCAGCGGCCGC GGTCTG GCGGCCGCTGAAG       TGCTTGTCCAGATGG  69 386
CL52_RS00225 NONE
CL52_RS00230 NONE
CL52_RS00235 NONE
CL52_RS00240   49965 ..   49992 + -14.8  -4.27316   TACAGGAATGAAAAA        GCCGCTGCCCTC TCAC GGGAGCAGCGGC         TTTTCGGTTACGGCA 100 146
CL52_RS00255   53535 ..   53554 +  -5.6  -3.41745   CCGGGCAGCGCTCGG            GCGTCGGG ATCA CCCGATAC             TTGATGTTGTGCGGG  53 434
CL52_RS00275 NONE
         glf   60320 ..   60368 + -16.9  -3.02461   AGCGTTGAATTGAAA GGCA-GGC-AGCCGCAATCGCGCC GGAA GGCGCGG-TGCGGTTCGCCGTGCC TGTTAGCAGAGGTTC  88 71
CL52_RS00285 NONE
CL52_RS00290 NONE
CL52_RS00295   63551 ..   63561 +  -8.2  -3.59979   TGCGCTGAGGCCGTT                 GCGC CTG GCGC                 TTTGAACTAAGCCGG  65 33
CL52_RS00300   64086 ..   64099 +  -5.3  -4.19238   GTTGCGAATCATTAT               TGCTA AATA TAGCA                TTTTGCAATTGCGCC  65 248
CL52_RS00305 NONE
CL52_RS00310 NONE
CL52_RS00315   68008 ..   68018 +  -4.6  -3.76224   CGGCGCTTCGCCCGG                 CCGG GCC TCGG                 TTTCGTGCGTGGCCA  58 327
CL52_RS00330   73295 ..   73336 + -10.1  -3.59979   CTCCAGCAGTTGCTC CTGATGGCTGTCGACGCGCT GGA AGCGC-TCGCCGGCGAACAG TTTGCCCTCGCCACG  67 372
CL52_RS00350 NONE
CL52_RS00355   77899 ..   77930 +  -4.3  -3.29511   TCCACCCTACGGTTG      GCACGCGGCGT AGGGTGGATA ACGCCGCAGGC       TTATCCACGCGTACC  48 455
CL52_RS00390   83717 ..   83741 +  -4.3  -3.31144   TGCGCCGTAGATGCC         CGAGC-CGAGC GTCAG GC-CGAGCTCG         TTGTAGGCGTGCACG  49 241
CL52_RS00425   92062 ..   92079 +  -8.3   -4.4078   CCGCAGAAAACGAAA             ACCCGCC AAAT GGCGGGC              TTTTCGTTCAACCGA  84 460
CL52_RS00445   96400 ..   96419 +  -3.4  -4.07568   CGCCCCGGGCGGCGA            GCGCCGAA GCTG TCCGGCCC             TTTTCAGCGGAGCCG  58 41
CL52_RS00450   97065 ..   97101 +  -4.3  -4.13767   CAGCTCGTCGGCGCC    GGTCTGCTCGAGC AGCACCTCCAG GCGCGCGCGGACC    TTTTCCGCTCCGCCG  62 116
CL52_RS00470  100138 ..  100165 +  -4.7  -3.68506   CGCCGAAACGCAAGC        GCAGCGCTGAA CCCGCC TCCGGCGCGGC         TTTGCATCGATCTTC  58 16
CL52_RS00475 NONE
CL52_RS00480  102256 ..  102277 + -13.7  -5.08824   CCGATGAGCCGTCTG           GGAGGCGCC TGCG GGCGCCTTC            TTTTTTGCCTGGGCG 100 44
CL52_RS00510 NONE
        recG  110078 ..  110109 +  -5.8    -3.727   GCCAGGTCTGACAAA      C-CATCCGTCGGAAC GAG GTTCCGCCAGGTGCG      TTTGGCTATACTGCG  60 30
CL52_RS00520  111992 ..  112007 +  -8.2  -3.06815   TCCAGTTCCAGCCGC              TCGGCC GGCA GGCCGG               TCTCTTCGAGCACCT  55 471
        uvrD NONE
CL52_RS00535 NONE
CL52_RS00540  118956 ..  118984 +   -19  -3.58731   AGCATAAGGCGCCCA        GAAAAGCCCGGG CTGGT CCCGGGCTTTTC        TTTGGCCGCTGTTTT 100 40
        fdnG NONE
        fdxH NONE
CL52_RS00560  124051 ..  124069 +  -2.2  -3.14132   GGCCGTCGCCGTCAC             GGAGCCCC CAG GGGGAATC             TTCGTGGCGGCCCGC  43 41
        fdhE NONE
        selA NONE
        selB  128488 ..  128500 +  -4.7  -3.53811   AACGCCTGCGGGCCG                GGCGC CAT GCGGC                TTTGCGGCGAGTGCG  55 140
CL52_RS00580 NONE
CL52_RS00585  131076 ..  131094 +  -2.2  -3.99559   GATTGCGGAGCAATC             GGACCCGG ATG TCGGGGCG             TGTTTCTTTTGCTTA  57 518
CL52_RS00600 NONE
CL52_RS00605  136179 ..  136217 +  -5.4  -2.66316   GCACGTGTCCGCGAC AG-GCT-CCCGCCGAATCG CACG CGATTCG-CGGGCAGCACA  TCCTGTACTGCCGGG  43 80
CL52_RS00610  137099 ..  137109 +  -6.8   -3.2218   GGACGGCCCGCCCAG                 CCCT CCG AGGG                 TTAATGAATGTTCGA  53 224
         uca  140897 ..  140907 +  -2.4  -4.09685   CAACGCGCGTGGAAA                 AGGC TTC GCCG                 TTTTCCACCCTACGC  57 146
        atzF  142975 ..  142993 + -10.2  -3.09516   ACCGGCATGCGGTTC             GGATGCGC CCC GCGCAGCC             TTCGATGGTGCCGGC  62 117
CL52_RS00630  145788 ..  145814 +  -8.7  -3.12351   CGCTGGCCAGCTGTC        GACGT-GCCGGC TTCG GCCGGCAACCTC         TTGAATATCCGCGGC  58 119
CL52_RS00635 NONE
CL52_RS00640 NONE
CL52_RS00645 NONE
CL52_RS00650 NONE
CL52_RS00655 NONE
CL52_RS00660 NONE
CL52_RS00665 NONE
CL52_RS00670 NONE
CL52_RS00675 NONE
CL52_RS00680  154798 ..  154814 + -11.5  -2.73771   TCGCGACGGCAAAGT              CGCGGGC CGG GTCCGCG              CTTTGCCAGGTATCG  62 284
        glnT NONE
CL52_RS00695  158196 ..  158240 +  -5.6  -2.54896   GCACCCGCTGCAACC CGG-CGT-CACCCGGTCGGCTC CCC GAGCCGGCCGGCTGCGCTACCA TCGCTTCCCTCGCAA  46 58
CL52_RS00700  158929 ..  158954 +  -3.9  -2.87211   TCGCCCGCGCCGCCA         CCCGTGCTAGCC TTC GGCTC-CACGCG         TGTGTCGCAGCGCAT  44 54
CL52_RS00705  159480 ..  159518 + -12.2  -3.14132   ACCGTACAGCGCGCA   GCCGTAGGCGGTGAGGCC GAG GGTCACGCTGCCGTCGGC   TTCCTCGCGCAGCCA  69 383
        cfaB  161721 ..  161774 +  -4.7  -2.74144   CTTTCGAGCTGGCTG CCGACCTGCTGCTC--CGGCGCGCT TTCGCCCT GGCG-GCCGATGACCAGCAGG-CGG GTTTCCGGCTCCAGC  43 483
CL52_RS00740 NONE
CL52_RS00745 NONE
CL52_RS00750  169700 ..  169717 +  -3.5  -3.77831   GCAGCACATCCCAAT             C-TTTGCT TGG AGCAAAAG             TTTCGCTGTTGCTAC  54 198
CL52_RS00755 NONE
CL52_RS00760 NONE
        rmuC NONE
CL52_RS00770 NONE
CL52_RS20435 NONE
CL52_RS21595 NONE
CL52_RS00775 NONE
CL52_RS00780 NONE
CL52_RS00785  185685 ..  185698 +  -2.3  -4.30809   GCCGGGTGCAGAGCT               GGCCA GTGA TGGCA                TTTTGATGCATCTTA  62 198
CL52_RS00790  186602 ..  186618 +  -2.2  -5.14477   CTGAACTTCTGAGTT              CGGC TGACTAAGC GCCG              TTTTTTGAGTGTATG  81 391
CL52_RS00800  188161 ..  188173 + -10.5  -3.57387   GACATGAACTGGTAG                CCCGC CTG GCGGG                TTTCGACCATCTCTT  67 395
        gabD  190022 ..  190054 + -14.9  -3.05268   TGAGGCATGTCGTCG      CAGCCGGCCCTTC TTGATCC GGAGGGCTGGCTG      TCTTCCGGCTGCTTG  78 38
CL52_RS00815  191447 ..  191458 +  -5.8  -3.72788   GGGAGCGGGTCGACA                GCGT CCGT ACGC                 TTATCTATTCTGCAG  60 109
CL52_RS00820 NONE
CL52_RS00825 NONE
CL52_RS00830  196040 ..  196050 +  -4.6  -4.08216   CGGCCGGTGGAAAGC                 TCGC GCA GCGG                 TTTTCCACCGGCTCG  63 48
CL52_RS00840  197649 ..  197686 +  -5.6  -3.70902   TGGGACAGCGTGCGC  GCAGCGGCGGTCTGAACG GCGA CGTT-AGAC-GCCGAGGC   TTTCGATGTCGCGGG  60 11
        rpmB NONE
        rpmG  199230 ..  199260 + -16.3  -4.12198   TGATCGGCCCTTGAA      CG-AAGAACCCGCC AATC GGCGGGTTCTTTCG       TTTTGGCGGCTTGTG 100 42
CL52_RS00865  202872 ..  202913 +  -7.7  -3.03159   AGGCTTTCGGCCAGG CCGCGCTGCCAGCGGCTGC GCTG GCGGCCGAGGGTGCCGAGG  TCTTCGGGGCATTCG  53 525
CL52_RS00920  218804 ..  218829 +  -5.9  -4.14739   ACCTACTCGCTGCGT         CCGGCCCCGGC AAGC GCCTGAGCCGC          TTTTCCGGTCAGTCG  67 5
CL52_RS00925  219958 ..  219987 + -13.5  -2.69468   AATCAGGTGATCGTT       GCCTGAGCCGGCCG CCA CGGCCGGCG-GGGC       TGATGTGTAGCCATC  72 20
CL52_RS20970  245894 ..  245919 +  -3.9  -3.53012   GCACAGCCGGTCGAA         GC-CCAACGCCG CCG TGGTGCTGGCGC         TTTGCAGGAGGACGG  51 401
        hisB NONE
        hisH NONE
CL52_RS01110 NONE
        hisA  260502 ..  260529 +  -8.4  -2.54896   GACGAGTAAGCCGTA        GGGTGGGCAACGC TTC GC-TTGCCCGCCG        TGCATTCGGTGACCC  53 93
        hisF NONE
CL52_RS01125  262637 ..  262661 + -12.1  -3.24747   GTCGCCGGCCTGCTC          GGCCATGCTGT CGC GCAGCTTGGCC          TTGATGATGTCGCGC  71 477
CL52_RS01160 NONE
        grxC NONE
        secB  270023 ..  270050 + -15.6   -2.8507   CAGCACTGAGTGCCT        TGAGGCGGGTCG CGAG CGATCCGCCTCG         TCCTTCCTTACCTGA  79 32
CL52_RS01180  272074 ..  272085 +  -2.2  -5.12068   AGTAGTGCATGGCGG                CTCT CCGG AGGG                 TTTTTGTTAGCTCTG  81 488
CL52_RS21280  272517 ..  272551 +  -6.4  -3.21924   GACCTTCTGACATTC    GTGGGC-CAGGCCCA ATAGGG TGGGCTTGCGCCAGC     TCTTCTGGCGGGTGC  53 142
CL52_RS01205 NONE
        pepP NONE
        ubiH NONE
CL52_RS01220 NONE
CL52_RS01225  279561 ..  279585 + -18.6  -3.48024   TGATGCCGTTATACT          CGACGCCCCC TCCAT GGGGGCGTCG          TCTTTCCTGCTGCCG  95 90
CL52_RS01230  281284 ..  281302 + -13.1  -2.62616   GCGCCAATTCGAACG             CCGGCCC CCCGC GGGCCGG             TCCTATCGCCCGTCA  67 90
        gcvT NONE
        gcvH  282897 ..  282926 +  -7.8  -4.59773   CAAGCCTGATTCCAT       GCAAAAGCCCCG CTTCGT CGGGGCTTTCGG        TTTTTGAGAGTACCG  83 32
        gcvP  285969 ..  285994 + -11.9  -3.03771   CTGGCGCGGCAGTGA         GACAGGCGC CCGCTTAT GCGCCTGTC          TCTTGGCCGCTGTCG  68 174
CL52_RS01255  287543 ..  287570 + -20.6  -4.78149   GGGCTAGCCTGAAAA        GGGCGGTCGGAC GCGA GTCCGGCCGCCC         TTTTTGCATTCTGCG 100 48
CL52_RS01260 NONE
CL52_RS01265 NONE
CL52_RS01270  291043 ..  291054 +  -2.2  -2.78384   TGCCTGGGATGGCAG                CG-GC CCG GCACG                TATAATCCGCGCCCC  39 46
CL52_RS01275  292383 ..  292405 +  -4.7  -3.93288   CGAGTGCACGCCAAT           CCGCCCACC ATGCA GCTGGGCGA           TTTCCTTGCATAAGG  61 517
CL52_RS01295  296148 ..  296175 + -13.4  -2.75844   TGAAGGCTTGCAAAA        TGCACGGGCCCC ATAG GGGGCTCTTGCA         ATTTACGCTGGCGGG  72 38
CL52_RS01300 NONE
CL52_RS20440  297025 ..  297080 + -12.5   -4.1822   TAACGGACCAGGTTC GGCAGGCGCTGC-CGCCGGAGCGG CTTGAACGA CCGCTCCGGCGCGCAGCCAGTCCC TTTCTTCGCATCACC  89 251
CL52_RS01310  298384 ..  298395 +  -3.6  -3.30443   GGTTCTTTGGTTGAC                GCTG GCTG CGGC                 TTGGTGTGCTCGTAG  46 27
CL52_RS01340 NONE
CL52_RS01345  306234 ..  306251 +  -2.5  -3.78022   TGCCTTCGGCCAGCC             GCGCCAC GCCC GAAGCGC              TTTCCTGGCTCTGCA  54 95
CL52_RS01360  311460 ..  311483 + -14.6   -4.2528   ATGCCTCACCCGAAA          CCCGTGTGCCG AGT CGGC-CACGGG          TTTCTTGGGTTAACG 100 80
CL52_RS01365  314097 ..  314123 + -11.5  -4.72272   CCGCGGCTAGATGAA         CCCGGCTAAGC CCCGC GCATGGCCGGG         TTTTTCATGCCCGGC 100 49
        recC NONE
        recB  324231 ..  324253 +  -6.8  -4.41348   AGCTTGGCCGCGGGT           CGGCGCCGCG CGA CGCCGTGACG           TTTGTTTCAAGGAGC  76 302
        recD  326107 ..  326144 +  -8.4  -4.08767   CTGTTCTGAGCGCAA   CTGAGCTGCAGCCCACG GCTGA TGCGGGTTGCAGC-CGG   TTTTGCGGCGCTCGA  73 32
CL52_RS01395  326918 ..  326928 +  -8.2  -3.01712   CGGCACCAGCAGCAG                 GCGC ACC GCGC                 TGTTCCAGCCGAGCG  55 254
CL52_RS01405  329423 ..  329433 +  -4.6  -4.02817   TTTCATCGTGAAGAC                 TCGC GGC GCGG                 TTGTTCTTGTGGCGC  63 442
CL52_RS01415  330635 ..  330660 + -10.4  -3.57615   CCACCGTCCCCGGAA         CCCGCCG-CGC CTTCC GTGTCGGCGGG         TTTCGCACGTCTTGC  70 70
CL52_RS01420 NONE
        pstA NONE
        pstB  335631 ..  335654 + -12.4  -3.29043   GGACGCTACGGTTGA          GGCCATGGGA AATC TCCCCTGGCC           TTGTCGGGCGCGCTT  72 26
        phoU  336759 ..  336769 +  -2.4  -3.14132   CCGCCTGCAATCGCG                 CCTC GCT GTGG                 TTGCTGACGAAGCGC  42 250
CL52_RS01445  338858 ..  338903 +  -5.9  -3.02043   CCGCCGACCATCAGG TCCACGCCGGCACCTGCCGCGG CAC CTGCGGCCA-TGCCGCCGCCGA TCTTCACGCCGAGTT  49 432
CL52_RS01460  341698 ..  341717 +   -15  -4.56914   AGGCCTGAAACGAAA            GGGCGGTC GAAT GACCGCCC             TTTTGCTTTGCCTGG 100 33
CL52_RS01470  344148 ..  344186 +  -7.2  -2.92653   GGGTACGCGCCGACC   GCCGCGCTTGACCGAGGC CAA GGCGTGCTCGGGCGTGGC   TCTCTAAGCTTCTGC  53 15
CL52_RS01475  345041 ..  345067 +  -9.2  -3.07043   TGACCACGGCGAAAC         CGCGGGCGGCCG GGT CGAACGCCAGCG         TCTTCAGGTCGTGAC  57 194
CL52_RS01495 NONE
CL52_RS01500  350149 ..  350171 +  -4.9  -2.50113   TACCACCAGGCCTGA          GCCATG-CAGG CCC CCTGGCA-GGC          GTTGCTCGACTGGTG  43 26
CL52_RS01505  350731 ..  350748 +  -7.7  -3.28924   GAACTGGCTTATCTG             GCC-GAGC CCG GCTCAGGC             TTCTGAGCGCGGCTG  58 2
CL52_RS01510 NONE
CL52_RS01515  351942 ..  351967 +  -2.4  -4.07568   CCCGTTTCGCCTCGA         GGCTCTCCTGC AGTTC GCTGGCG-GCC         TTTTCGAGCGCGGCC  58 348
         pip NONE
         dtd  353793 ..  353830 + -10.5  -3.40403   GGGCCAACTCCAGGG   GTTCGATGTGCAGGTGG CGGT CGTCCTGCACGTCGTAC    TTCTCCTCGGCGCCG  65 266
CL52_RS01585  360468 ..  360478 +  -8.2  -3.40403   CACTGGCCTGAGCCG                 GCGC ATC GCGC                 TTGTGCTCCGCCAGA  63 30
CL52_RS01610  364446 ..  364484 + -10.1  -2.78463   CGACAGCCAGTTCCT   GTGCGGCGTTGGCGAGG AAGTG CCGCGCCAGCGCCGGGA   TATCCTCGCGCCGGT  57 480
        thiI  371309 ..  371346 +  -5.3  -3.08966   GCCGTATCGTCATTC   GACGCAAGCACCCTCCC GACC GGGCTGCTGCCTGCGCC    TTCCGTCCCGTTTCG  47 59
        typA  373235 ..  373258 + -16.8  -4.14627   GCCGTTGCAGTCAGA          CAAAGGCGCC TTCG GGCGCCTTTG           TTGTTTCTATCCAAA 100 43
CL52_RS20445  375293 ..  375325 +  -5.5  -3.22409   ACTCACTTCGTTCGC      TGGACAGCCAAAATC TGC GCTTTTGTCTGCCCG      TTAGCTTAATCGTTA  51 58
CL52_RS20975 NONE
CL52_RS01655  376375 ..  376397 + -11.3   -2.6176   CCTTTGGCCCTCCAC          CGGACGCCCT TGCC AGGGCG-CCG           CTTATGGCTGGCGTT  62 73
CL52_RS20450  377575 ..  377588 +  -4.5  -3.73042   GATCGCAATCATCAT               GCCTT TTGC AGGGC                TGTTTTGGTAAAGCC  56 453
CL52_RS20980  379070 ..  379084 +  -3.4  -2.97475   CGCAGTGGAGTTCTT               CCGCGG AAA TCGCGA               CTTTCTACTGAAAGA  43 309
CL52_RS20310  380314 ..  380346 + -11.3  -3.22409   GCTCACTTCGTTCGC      TGGACAGCCAAAAGC TGC GCTTTTGTCTGCCCG      TTAGCTTAATCGTTA  67 58
CL52_RS20460 NONE
CL52_RS20985 NONE
CL52_RS01660 NONE
CL52_RS01665 NONE
CL52_RS01670  384495 ..  384523 + -12.3   -3.1552   GCAGCACGAACGCGC        CGTGCAGGCTGAC GGT GCCGGCCGGCACG        TCTTCGTCGATGCGC  70 283
CL52_RS01680 NONE
CL52_RS01685  386411 ..  386421 +  -8.2  -3.44527   CGAAGCCGCGCGGCT                 CGGC GTT GCCG                 TTGTGGTACTGGCTG  60 229
CL52_RS01700 NONE
CL52_RS01705  390053 ..  390069 +  -5.1  -3.62046   CGTTGCGCCCCAGGC              CCTCG TCCTGAC CGAGG              TTCTTCAGGACCTGG  54 478
CL52_RS01725 NONE
CL52_RS01730 NONE
CL52_RS01735 NONE
CL52_RS01740 NONE
CL52_RS01745 NONE
CL52_RS01750 NONE
CL52_RS01755  397895 ..  397908 +  -4.5  -2.62396   GAGTCAGCTGATCGT               CGAGC GGGA GTTCG                TCCTGTGAACGCCTG  41 4
CL52_RS21405 NONE
CL52_RS01760  399655 ..  399674 +  -2.8  -5.14563   TGTTTCGAAACTTTT            CAGCGAGCG CTC CGCTC-CTA            TTTTTTGGTGCGCGA  82 105
CL52_RS01765  400927 ..  400962 + -13.3  -3.02144   GCGTGGCTTTCCGGC   GCCTCCG--CCGGCGGC CACT GCCGGCGGATCGGAGGC    TGTTCGCGGCCATCG  71 52
CL52_RS01785 NONE
CL52_RS01790  404818 ..  404835 + -12.7  -3.67597   GGCGGGCATGAAAAA             GGGAGGC CTGG GCCTCCC              TTCTTGCCTCACCGC  77 43
CL52_RS01800  407696 ..  407706 +  -8.2  -3.64703   TCCGTCAGGTGGAAG                 GCGC CTT GCGC                 TTTCCATCCCCGACA  65 41
CL52_RS01805  408440 ..  408465 + -19.7  -4.62302   GTGCTCTGATCGCTC         GGCGGCCGGGC GTCG GTCCGGCCGCC          TTTTTCCGGGTGTTC 100 32
CL52_RS01810  409622 ..  409651 + -12.1  -2.70932   GCTGGCGTTCAAGCG       TGGCGACAGACAC CTGC GTGCCGGTCGCCA        TGGTTGAAGCCCAGG  66 192
        ilvA  412533 ..  412546 +  -5.9  -3.89346   ATGAGAGCGACAACC               CGGCC TATC GGCTG                TTTCTCGGCTGAGCG  62 0
CL52_RS01830  413172 ..  413185 +  -8.1  -4.07568   AGAAGTAACTGCCCT               CGAGC GTCT GCTCG                TTTTCCGCCAGCCAG  69 178
CL52_RS01840  414377 ..  414390 +  -3.8  -3.58343   CGGTGCGGGACTGAA               GAGG AGAAAG CCTC                TTTGAGCATGCTCGG  53 27
        ptsP  416676 ..  416694 +  -6.6  -3.57144   CCGCGGTCTGACGGC             TGCGCTCA CCC TGCGCGCG             TTTCGAGCTGCAGCC  59 30
CL52_RS01855 NONE
         lgt  419168 ..  419199 + -19.5  -3.09492   ATTGCCTGACCGTCC      GGCCCGGCCGACGC GACAA GC-TCGGCCGGGCC      TCTTACCATTGGCCC  93 32
CL52_RS01865  420414 ..  420431 +  -8.3  -3.56325   CGTGCCACCGAATAG             CCGAGCG AGAT CGCCCGG              TTCTCGTTCTCGCGG  62 408
CL52_RS01895  425811 ..  425830 +  -2.8  -3.29144   ACGCCTAGCGGGCGA            CCAGCACAT CGC ATG-GCGGG            TTATCGAAGAAGTGC  46 33
CL52_RS01905 NONE
CL52_RS01910  428872 ..  428887 +    -9  -3.01924   TGGTCGAGGTCGACA              TCGAGC AGCC GCTCGA               TCTTGAACAGCGGTG  57 238
CL52_RS01940  435335 ..  435347 +  -3.3  -3.78775   CCTTCGCCATCGGCA                TGCGC GGC GAGCA                TTTCCTCGTAGCGCC  56 461
        glcD NONE
        glcE  438668 ..  438706 +  -2.8   -2.6155   CGCCTTCTGGAGCGC   GTCCCGAAGGGTTGGCGC GAA GCGCCAACGCAAAGAGCC   ATTCGTGTTGAGAAC  39 150
        glcF  439954 ..  439964 +  -2.4  -4.09685   GGGGTGACGGTGGAA                 AGGC TGC GCCG                 TTTTCCACCCTACGA  57 34
CL52_RS01965 NONE
CL52_RS01970  442749 ..  442776 + -16.2  -3.55444   CCGCCTGAAACACGA        GCCCCGGACGCC TCTT GGCGCTCGGGGC         TTTCGAGCATGGGGA  91 78
CL52_RS01975  444645 ..  444674 + -17.9   -3.9398   AAGCGCAGCAACGGG       TGGAACGGGCGGC TTCG GCCGCCCGTTTCG        TTTGTCGACTTCTGC 100 39
CL52_RS01980 NONE
CL52_RS01985  446208 ..  446218 +  -2.4  -3.59315   TGCCCAGCTAGAGCT                 GTCG CAG CGCC                 TTTCAGGGTCGTTCC  49 102
CL52_RS01990 NONE
CL52_RS01995  447164 ..  447174 +  -2.4  -4.09685   TACCTGTGGTGGAAA                 ACGC TGC GCGG                 TTTTCCACCCTACGG  57 121
CL52_RS02005  449544 ..  449564 +  -8.9  -2.94412   GTTCCCTCACCCAGG            CCCTCTCCT ACC GGGCGAGGG            TGCTTTCACCTTCCA  55 102
CL52_RS02010  451270 ..  451281 +  -5.8  -3.54424   CGCCGAGTTCACGCG                CCCA GGCC TGGG                 TTTCCGGACGTGAGG  54 473
CL52_RS02020  452893 ..  452905 +  -4.1  -3.02144   CGCTTCGCTCCGGTT                GTTCG GCC TGAAC                TCTTGCGCCGGCTGG  45 55
CL52_RS02025 NONE
CL52_RS02030 NONE
CL52_RS02035  455088 ..  455098 +  -8.2  -4.12188   GTAAGGTGGAAAAAC                 GCGC GCA GCGC                 TTTTCCACGTAATGG  76 142
CL52_RS02045  458356 ..  458388 +    -7  -3.38768   CGGCGTGCTGGTGAG      GGCCGGCCGATG AAGCCGTGG CATTGGTCGGTC      TTATGGCTGCTGTCG  55 13
CL52_RS02050  459320 ..  459332 +  -6.2  -3.35996   GGAATAGGTGCCGAT                GGCG GCAGG CGCC                TTGTCGGTGGAAATG  55 423
         rph NONE
CL52_RS02100  468612 ..  468627 +  -6.1  -3.65046   GAAACCGGGGCTCTG              CTGGC AATCAC GCCAG               TTCTTCACATCGAGC  59 359
        pyrE  469881 ..  469893 +  -5.5  -3.71284   CGCGCCCTGCTTGCT                CTGCT TTC AGCGG                TTATCTTGATGGCGG  60 74
CL52_RS02115  470551 ..  470561 +  -5.4  -4.58395   GTTAGGTCTGTACCT                 TTCG CCG CGAA                 TTTTTCGACGGTGAG  74 132
CL52_RS02120  472077 ..  472095 +   -16  -5.21709   GGCCGGCATGAAAAA             GGGGAGCC TGT GGCTCCCC             TTTTTTCGTCTCGGC 100 43
        radC NONE
CL52_RS02155  481330 ..  481350 +  -5.3  -3.14132   CGGCCGCTAGCCTGA            TTGGCCTCC AAT GCAGGCCAC            TTGCTACCAAGGGCC  48 87
CL52_RS02160 NONE
CL52_RS02165  483617 ..  483633 +  -4.3  -3.72576   GACCGCCGCGCCGAG              GCCTGAC GCC GTTCGGC              TTTACTGGCCGAGCG  56 20
        dadA NONE
CL52_RS02195  489830 ..  489858 + -14.6  -3.29381   TCTAACACCGCCCAG       GCGGCCAGTGCGC AAGA GCGC-CTGGTCGC        TTCGTCGTGTTGTAA  82 36
CL52_RS02200 NONE
CL52_RS02205  491077 ..  491108 + -20.2  -3.85698   CGCTGATCGCACCCG      CAACGAAGCCGCCC GATT GGGCGGCTTCGTCG       TTTCTGGCGGAGAAA 100 49
CL52_RS02210  491939 ..  491957 + -10.2  -2.71144   ATCGATGATCAGGAT             CCGGTCGC TGG GCGACAGG             TGATTCGAGGCGATG  57 245
         gap NONE
CL52_RS02230  494862 ..  494879 +  -2.7  -3.66178   CGTCGCTGACTAAAA             C-GAGACG AAT TGTCTCAG             TTTGCACTTGACGCC  49 52
CL52_RS02235 NONE
CL52_RS02240  497707 ..  497728 +  -9.3  -3.13403   CGGTCGCTACACTCC           CGGGCGCCC TGTG GGGCGTCCA            TCTTCATCGAACGAC  61 70
CL52_RS02245  499022 ..  499040 +  -7.4  -3.53012   CAGGCTCAGACCGTA             GATCGCCA CGC TGACGATC             TTTGCCGGCGAGCCG  60 499
CL52_RS02260  503648 ..  503671 +  -5.2  -3.40371   CGCACTCGGTGAGGT          GGTCAGCGACT GAT AG-CGCAGGCC          TTGCTTGGTGGCATC  53 495
        glnK NONE
CL52_RS02285 NONE
CL52_RS02290  510550 ..  510567 + -14.1  -5.13354   GAAAGGCTCTAAACG             GGGCGCC TTCG GGCGCCC              TTTGTTTTTTCTGCG 100 45
CL52_RS02295 NONE
CL52_RS02300  511512 ..  511554 + -25.1  -2.71144   CCTATCTGAGCCGCA CAGAAACGAAAGAGCCCGC ATCGC GCGGGCTCTTTCGTTTCAG TCATTCGCCGCGCTG 100 32
        cyaY  516731 ..  516760 + -16.5  -5.58209   GGTCGAGTGCAGGTC       ACAAAACCCCGCC TTCG GGCGGGGTTTTGC        TTTTTTTGCCTTTCG 100 89
         rnk  517259 ..  517275 + -13.7  -4.67048   GGCGCGGTGCCTGTA              CCCGCTC GAT GAGCGGG              TTTCTTTTGCGCTCG 100 78
CL52_RS02390 NONE
CL52_RS02395  530635 ..  530669 +  -6.9  -3.27475   CGCCTGCGGCGACGC     GGCCCGCGCGCAGGC CTGAA GCCTGAGGCCTGGCC     TGTTATCATCGCGCC  55 62
        hemC NONE
CL52_RS02405 NONE
CL52_RS02410 NONE
CL52_RS02415  534856 ..  534889 +  -8.7  -3.85698   AGTCCCCGGCGCAAG     GCCCTGGCGCCGCCG AATA TGACGGTGTCACGGC      TTTGTGCGAGACGAC  71 41
CL52_RS02420  535580 ..  535596 +  -9.4  -2.78463   GAAGGTTCCCGCGCG              GGGGCA TAGGC TGCCCC              TGTGGTGACGGAAAT  57 151
CL52_RS02425  536208 ..  536229 + -10.1  -2.62396   CGAGGTCGAGCCGCT           GGCAGGCCCG CTG CGGGCC-GTC           TAGTATGGGCGCATC  59 70
CL52_RS02430  537084 ..  537125 + -15.7  -2.89564   CGCCAGCTGAGTCTC GTGCGCCGCGTCGCGTAGC TGTT GCAGCGCGGCGCGGTCCGC  TGTATCCGGTGCCAG  76 31
CL52_RS02440 NONE
CL52_RS02445  540068 ..  540081 +  -2.4  -2.60079   CGCTCCACACTCAAC               TTCC ACACGA GGAA                TAACTTATGGAATGG  38 9
CL52_RS02450 NONE
CL52_RS02455 NONE
CL52_RS02460  542338 ..  542351 +  -2.3  -4.21275   CCGCGGCGACAAAGT               CGTTC ATCA GGGCG                TTTTCGGTGACTTCG  62 383
        hemB NONE
        ppk1  549013 ..  549032 + -16.4  -3.50853   TGCGCGCAAACGAAA            CGCCCGGC TTCG GCCGGGCG             TTCTCGTTAGCGCAG  89 51
        trxA  551092 ..  551111 + -16.4  -5.24129   TCTGGTTCGACCAAA            GCCCCCGC CGCC GCGGGGGC             TTTTTTATGGAAGCA 100 45
         rho  552582 ..  552599 + -14.1  -3.35197   GGGTCGTTTCACCGA             GGCCGGG GAAA CCCGGCC              TTCGTCTGTCTGCCG  77 46
        ubiD NONE
CL52_RS02510  555196 ..  555227 + -18.8  -4.34402   GCTGATTGCCGCCAA      AGCAAAACGCCGGG TCCG CCCGGCGTTTTGCA       TTTTGCTCTCAGCGC 100 36
        rpmE  560339 ..  560370 +  -2.2  -3.53224   CGGCGCCAAGTAAGC      CGAACCGAAAAACCC ATG GGGTTT-TCCGAGCG      TTTGAGAAAGGCGTC  47 28
CL52_RS02535  561615 ..  561671 +  -3.5  -3.53012   CTGGCTGGCCGAACA G-CTGCCGCATCTGAACGG-CGGCCTG CATGC CTGGCTGGCCGAACAGCTGCCGCGGGC TTTCGGCAGACCGGC  49 495
CL52_RS20990  562437 ..  562450 +  -4.5  -2.91322   CGCTGACGAAGACGT               CGCAT ATCT GTGCG                TGCTTTGGCGAGTAT  44 35
CL52_RS02550  563877 ..  563896 + -10.7  -4.97158   CGAGCGCTAAAAAAA            CGCCCTG CTTAGT CAGGGCG             TTTTCTTTGGTGTCG 100 50
CL52_RS02560 NONE
CL52_RS02565 NONE
        pilO NONE
        pilP NONE
CL52_RS02580 NONE
        aroK  572041 ..  572059 +    -3  -3.85698   ATGGGCGGGAGCAAT             CTGCGCTA TCC TAGCGCCC             TTTATCCAGCGGGGG  56 12
        aroB NONE
CL52_RS02595  574814 ..  574833 +  -5.7  -4.09864   ACTGCTCCCCCTTTT            GCCCGCGT GTATG ACG-GGGC            TTTTCAGCGCTCCGT  65 122
        gltB NONE
CL52_RS02605  580888 ..  580907 +   -15  -4.35518   CAAGCCGATTGAAAG            GGCACGGC GTTC GCCGTGCC             TTTTGCTATCCGCTT 100 68
        hemE  582043 ..  582074 +   -18  -4.23892   ATCCGGTCGCCGTAA      CGTCAACGCCCCGC TCGA GCGGGGCGTTTGCG       TTTTCAGTGGTTGCC 100 40
CL52_RS02615  582720 ..  582740 + -18.3  -4.04474   CGCGGGTCTCCTCAT            CGTGCCCGC TCA GCGGGCACG            TTTCTCTCAGGCTAT 100 41
CL52_RS02620  585100 ..  585120 +  -2.4  -4.10161   CGCGTCAACCGATCC            TCGAGTGC ATCGA GCTCGCGA            TTTTCCAGCGTACTC  58 506
CL52_RS02645 NONE
CL52_RS02650  589483 ..  589508 + -11.1   -4.2803   CCAGAAAACAGCAAA         GGCCCAAGTCCC TGA GGGACC-GGGCC         TTTTCGCTTGAGATA  89 190
CL52_RS02680 NONE
CL52_RS02685 NONE
CL52_RS02690  596262 ..  596282 +  -4.5  -3.85698   GCGGAATCATTTGAA            CATGCCCGC TGG GCGGTCGAG            TTTGTCCGGCGCAGC  58 27
CL52_RS02695 NONE
CL52_RS02700  597988 ..  598003 + -11.8  -3.57792   GCGGGCATAAAAAAA              CCCCGG CGAA CCGGGG               TTTGGCAGTCACTCG  75 413
        tsaD  603483 ..  603499 +  -7.9  -3.17763   GCCGTTCCCGTCCCG              CCAGCAG AGC CTGCAGG              TTGCTGCGATGTCGC  56 58
        folB NONE
        folK  605170 ..  605201 + -10.1  -3.40775   GCTTGCGTGCGGAAA      GGTG-CGCCGCTGC TGGGT GCAGCGGCGCCGGC      TATTTCGCTGGCGAT  65 193
CL52_RS02800 NONE
CL52_RS02805 NONE
CL52_RS02810  621834 ..  621873 + -10.6  -3.34715   CGGCTTGTCCTGTTC  TGCCGGACGCCTGG-GCTC GAT GAGCACCAGGCCGCCGACG  TCTTTCGCACCGCTG  66 275
         rpe NONE
CL52_RS02825  624054 ..  624072 +    -3  -4.30576   GCTTCGCCTGAGGGG             CTGCGCTA GTG TGGCGAGG             TTTTCCTCCTGCCCG  64 17
        trpE NONE
CL52_RS02835 NONE
        trpD NONE
        trpC  628245 ..  628274 + -22.9  -4.30576   CGTCTGAAACGAAAA       GGCCGGAGTCGCG TCGC CGCGGCTCCGGCC        TTTTCCTGCTCGGGC 100 51
CL52_RS02855  629704 ..  629725 +  -3.5  -3.83502   TCCGCGCGTAGAGAG           GCCCGGCGT CCGG GCGGCGGGG            TTTCGTCTGCCGGTA  56 145
        speD  630776 ..  630833 +  -6.7  -3.53091   ATCCGCGTGCGCAGG TCGTGGCAGCCGAGCA-CGCCGGGCACG GTG CGGGCCAGGCGCTGCATGTCTTCGCCGA TTTCCGGCGAGAGCT  58 223
CL52_RS02875  632961 ..  632973 +  -4.8  -2.84344   CGGACTCGGGCGCAC                CACC CTGCC GGTG                TACTTGCTCATTTTG  44 452
CL52_RS02890  634203 ..  634217 +  -4.2  -3.81755   TATCCATAGTCCCAT               CTGAAC CGA GCTCAG               TTGTCTTTCCAGAAT  56 59
CL52_RS02895  635097 ..  635117 +  -4.7  -3.63298   CCTGAGCAGATCGAC            CTCAAGGTC GAG GAGTTTGAG            TATTGTTTGGTTGGG  55 395
CL52_RS20480  636397 ..  636412 +  -4.6   -3.6715   TTAACGCTGGCAACA              CCAACC TTAC GGCTGG               TTTCGGCTTGGCTCC  55 290
CL52_RS02905 NONE
CL52_RS02910 NONE
CL52_RS02915 NONE
CL52_RS20485  640612 ..  640644 +  -7.5  -3.09831   CGGCCGTTCCCCAAC      GAATGCTCCCAGTCG TGG CGACAGGGAGCTCCC      TCATTTTCAACTCAA  54 224
CL52_RS02925  641616 ..  641634 +    -3  -3.80841   TGGTTTTGCGAATAT             TCCCATCG CAG CGATTGGC             TTTGCTGCTAGTACT  54 420
        cadR  644024 ..  644035 +  -7.2  -3.89881   GTCTTTGCTGGCGAC                GGCC ACGT GGCC                 TTTGTGGAGGTTCAT  66 205
CL52_RS02955 NONE
CL52_RS02960 NONE
CL52_RS02965  654361 ..  654398 + -17.8  -3.52204   TGGATGGCGGCACAC   AACGCCCCGTTCTTGC TAGCTC GCGAGAACGGGGCGTG    TTGGTTTCGGAGTGC  95 45
CL52_RS02970  656895 ..  656933 +  -8.8  -2.55351   TGATTCGCCGAACAA   TGTTTCCAGCGCCCACTC TTC GGCTGGGATCTGGAAACG   GTTCATGTACAGCAC  52 294
CL52_RS02990  660064 ..  660074 +  -8.2  -3.76839   CCTTGATCCAGGGCT                 CCGG TGG CCGG                 TTTAGCTTGAGGTTG  69 502
CL52_RS21005  660481 ..  660501 +  -2.5  -2.91429   TCGAACAAACTAGGT            CTATTGCTC GTT GAGTGATCG            TCTCTGAGCATTTTA  40 46
CL52_RS03005  662575 ..  662587 +  -3.3  -4.18018   ACCCAGCCTTTCTAG                ACGAG GTG CTCGA                TTTTGCCTAACGAAC  61 3
CL52_RS03010 NONE
CL52_RS03015  664316 ..  664339 +  -8.9  -2.75825   CCTCGTATCTATAAT          TGGTGGCTC AGCTAG GAGCCATCA           TGAGTTTGTTGCCGA  54 215
        hrpB  666911 ..  666933 +  -7.1  -3.12327   ACCCAGTGTTGCCTC          GAGAG-CAAC GCAG GTTGGCTCTC           TGTTGAGTGTGCCAG  53 72
        hrpB NONE
CL52_RS03050 NONE
CL52_RS03055 NONE
CL52_RS03060 NONE
CL52_RS20515  682117 ..  682156 +  -9.5  -3.30441   CTGAGGCAGTAGGCC GCATGGATCGCAT-GCAAG CACG CTTGCGATGCGATACA-GC  TTCTCGACGGTGATG  61 188
CL52_RS03070 NONE
CL52_RS03075  684411 ..  684423 +  -4.1  -3.15699   CCAGTCGAGGCTGAT                CCAAT GAT GTTGG                TGTTCATGAATCCAT  47 48
CL52_RS03080  685065 ..  685075 +  -2.4  -4.06491   CCTCAATCGTCGGCC                 GGGC TCT GCCA                 TTTCTATCGGATTGC  57 309
        tnpB  686165 ..  686187 +  -4.8  -3.29144   GCGCTTCCTCCATCG           CTGGATCG CTGTAGC CGAACCAG           TTCTGCAGCAGATGC  50 206
        ltrA  693565 ..  693605 +    -9  -3.55444   TGTCACGTACGGTTC T-GCGAG-CGGCTGCGGGGG CAG TTCCCGCGGCCGACTCACCA TTTCGGCAGTGCGAC  68 49
CL52_RS03145  700561 ..  700577 +  -7.9  -3.18264   GGTCGTAAAAAGCGG              CCGCCTC CTC GAAGCGG              TTGGTGCCTAGCGAG  54 361
CL52_RS03160  702080 ..  702095 +  -6.8  -3.05384   CCAGTGCGGCCAGGC              GCTGGCG CAC CGCC-GC              TTCGATGCCGACGGC  51 167
        groL  715909 ..  715965 +  -4.2  -3.62096   GATGCCTTCGTAGTC GTCCAGCAGG-CCGCCGCAGCCG-TAGA GGA TCAGGCGGCCGCGGTAGACCTCCAGGGC TTTGACGTGGTGCGA  51 298
CL52_RS03220  718312 ..  718350 +  -5.1  -3.53012   TGGCCACCGAGCCCT  CGATG-TCCAGGCCGCGG CAGG CCTCGGCCAGCAACACCG   TTTGAAAGCCCGCCC  54 115
         mpl  730218 ..  730228 +  -2.4  -4.09685   ATGTAACGGTGGAAA                 ACGC TTC GCGG                 TTTTCCACCCTACGA  57 98
        ubiX NONE
CL52_RS03285  731485 ..  731496 +  -5.8  -3.61764   GGCGAGGCAAGATTC                CGCT GTCG AGCG                 TTTCGCCCTTCATGG  57 82
        ftsH  733592 ..  733604 +  -6.2  -3.30771   CCAGCGGAACAAGGT                CGCC AGCTC GGCG                TTGTCCAGACTGTGG  53 250
CL52_RS03300 NONE
        tsaE NONE
CL52_RS03310  737875 ..  737895 +  -6.2  -2.63102   CCACCACGCTGGCCT           CGCAAC-CA TGAG TGAGTTGCG            TCGTATCCAGCTGCT  46 15
        mutL  739745 ..  739771 +  -3.5  -2.52516   CTGGACCGGCTGTTC         CTGCGCGGTCG CTGAC CGCCCGTTCGG         CTTGCTAGTGCGGGG  39 11
        miaA NONE
         hfq NONE
        hflX  742460 ..  742493 +  -8.1  -3.66874   ATACTTTGCAATAAA     GCCTGGAA-GGGCGGC TTT GCCGCGCGTTTGAGGC     TTTCGGTAGCATTGG  65 27
        hflK NONE
        hflC  744678 ..  744694 + -13.7  -5.14477   TGCTATGATCGGCCA              GCCGGGA ACA TCCCGGC              TTTTTTGCGTCTGTG 100 96
CL52_RS03345  746096 ..  746108 +  -4.1  -3.08812   CGCGGGCTGCATCGC                TACGG ATT CTGTA                ATTTCTTGCCGGCAG  45 51
CL52_RS03350  747475 ..  747491 + -15.1  -5.46276   GGCTGAAACGAAAAA              GCCGCCC TAT GGGCGGC              TTTTTTCTGTCTGTT 100 47
         rnr NONE
        rlmB  751377 ..  751397 + -14.7  -4.81852   GGTTGACCCCCGCCC            TTGGCGGCC TGC GGCCGCCAG            TTTTCTTCATTCTGC 100 35
CL52_RS03375  753756 ..  753770 +  -2.7  -3.72742   AGAATGGCGCCCCTT               GCCCG GACGG CAGGC               TTCTGTTCGTCCTGG  52 95
        rpsF  754261 ..  754283 +  -3.4  -3.06815   GACAACAGCGACAAC           TCCGCTGA CGAGTAA TCACCGGA           TCTATTGAGGAGCCT  43 11
        rpsR NONE
CL52_RS03390 NONE
        rplI  755969 ..  755999 + -15.5  -4.96501   CTGGCGAGTAACATC      GGGCACGCTTCCAC GCAG GTGG-GGCGTGCCC       TTTGTTTTTCTGCAG 100 65
        dnaB  757458 ..  757471 +  -3.1  -3.57561   GCTTCGACCGGCCGA               GCG-TC GAG GATCGC               TTTGGCGGCTTGAAG  51 54
         alr  758690 ..  758700 +  -4.6  -3.49475   CGCGATACAGCGCCT                 GGTC GGC GGCC                 TTGTATAGCCCTGCG  52 99
CL52_RS03415  763296 ..  763318 +  -6.3  -3.14132   TCGGTGGCACCTGTG          GTGCGCTGCG CCAG TG-AGCGCAC           TTCATCGGCGACCAC  51 402
CL52_RS03430  767861 ..  767894 + -15.3  -2.82015   GCAGGGCTGAGGCCA     G-GCGGCGGGCTCG CCTCCAA CGGGCCCGCCGCGC     TCTGCTCAATCTAGG  78 31
        rluD NONE
        pgeF  774059 ..  774074 +  -6.1  -3.48593   CGTACGGGGCGTTTC              GCCAG CCTCGT CTGGC               TTGTCTGAGGGGCTC  55 2
        clpB  776803 ..  776850 + -14.2  -2.83409   ATCGTCTTCGCCTGA GTC-GATTTCCGGCTGCTCCC CGCGCGC GGGAGCAGCCGGAACCCAGGC TGTCGTAAATTACTG  77 26
CL52_RS03470 NONE
CL52_RS03475  777122 ..  777138 +  -5.1  -3.08133   CGAATCCCCCTACCC              CGACC ATTTATG GGTCG              TTAGCTCAGTCGGTA  47 20
CL52_RS03480  777235 ..  777261 + -13.1  -5.64274   TCGGAAGCAAAGAGA        GCTGGAAGTGCC GAAA GGC-CTTCCAGC         TTTTTTTATGCCTGC 100 52
        nadC  782691 ..  782717 + -11.6   -2.7555   TGTCCTGGTAGCTGC         TGGTCAGTTTGC GCA GCAGACTGGCCG         TCGTGTTGAAGTGTG  62 296
CL52_RS03510  783669 ..  783698 +  -6.9  -3.57263   GTAACTTCCGACCTC       GCCCAGGGGCGTG CTCG CGCGGCCCCAGGC        TTTCCCGATCGAGAT  59 37
CL52_RS03515  785135 ..  785153 + -12.4  -3.06796   GCTGCCTGCGTCGCG             TGTCGGCG CAC CGCCGGCA             TTCCCTGAGGTCGAA  68 76
        zapE  786635 ..  786657 + -14.9  -3.30124   CCGTTTCGATGCGCA           GCCGCTGCA GATAA TGCAGCGGC           TTGTCGCCGGTAGCC  78 287
         nfi NONE
        ampD NONE
        ampE  790007 ..  790024 +  -8.3  -5.07486   CGAATCACCGCTTTC             CTGGGCG GTGT CGCCCCG              TTTTTCTTCCGAATC  93 230
CL52_RS03550  793383 ..  793396 +  -8.1  -3.14931   CAACTGTTGCGATAG               CTGGC CTCG GCCAG                TTCGTCGGGGCTGAG  54 76
CL52_RS03570  796922 ..  796945 +  -3.2  -4.18506   GGGATATCCCAGTCG          CTTTC-GGC CTTGCGC GCCGGAAAG          TTCTTTTCGCAGTGC  63 375
        tesB NONE
CL52_RS03585  799447 ..  799478 + -15.8  -3.36492   CGCCGGCCAGGCAGT      CGGCCTGCAGCTCC TGGC GGACCAGCAGGCCG       TTGTCGCCTTCGAGC  82 356
CL52_RS03600  801550 ..  801592 +  -6.1  -3.31144   CGCAAGCATGGCCTG CGCGAGCGGCGGGTG-CTGC TGCA GCAGGCGCTGGTAGCACGCG TTCTGGACCTGCAGC  53 313
CL52_RS03620  805948 ..  805969 +  -5.1  -2.98545   GGGCAAGGCCGGCCA           GGGC-CGG TTGTCGT CCGCGCCC           TGATTCTTCTGGAGA  47 1
CL52_RS03625 NONE
CL52_RS03630 NONE
        narH NONE
        narJ NONE
        narI  814312 ..  814359 + -15.4  -3.76413   GCCCGCGACAGCGTG CACTGAACAGCTGTGGCCGGCG TGCG CGCCGGCCACAGCCGATACGCG TTTCCAGTTTTCGAG  90 20
CL52_RS03650 NONE
        moaA  816429 ..  816478 +  -8.6  -3.06796   GCTGCGCTTCATGAA TGCCAGCGGTGGCT-GAAG-CCGT CGCG ACGGGCTTCGAGCCGCCGCACGAA TTCGCTACCATCGAG  57 10
        moaB NONE
CL52_RS03665  818446 ..  818475 + -21.5  -3.22884   TGGCCTGAACGAAAA       GACGCCCGGTGAC TGCG GTCGCCGGGCGTC        TTCGTCAGTTGCTGA 100 33
CL52_RS03715  827152 ..  827208 +  -2.9  -3.90112   CTTTCGCCGCGAGGG C-TGAAGCCAGCGGCCTCGCCGCTGGTC GAGT GGCAGGCCG-GCGCCCGC-GGCTTCACG TTTCATTCACGCCGG  56 22
CL52_RS03720  827754 ..  827780 + -15.9  -4.13654   TCCAGACGAAAAAAA        GGCGCAGGG-GC AACT GCACCCTGCGCC         TTTGTCGTTTCCGGC 100 55
CL52_RS03735 NONE
CL52_RS03740  832622 ..  832646 +  -3.5  -3.14564   CGGGGCCTTGATGGC          GGTCAGGCT AGGTTGG GGCGTGACC          TTCATAGAGCGGTGC  44 63
CL52_RS03745 NONE
CL52_RS03750 NONE
CL52_RS03755  834440 ..  834452 +  -2.6  -3.71607   ATCGCCGTGGTCTGG                GCGG TGATC CTGC                TTTGAGTCCTCTTCC  52 8
CL52_RS03760  836723 ..  836754 +    -5  -4.14598   GAGTTATCGGGGTGT      GGCCTGGATCGGCA AGCC TGCAGTTTCAGGCG       TTTGATTTCGTTCGA  65 106
CL52_RS03780  840763 ..  840790 +   -12  -3.28924   CACTAGAGTGGCTCA        GC-CGGCCTGCTG CAC CGGCAGGTCGTGC        TTCTGCCAGGCGGTC  72 196
CL52_RS03840 NONE
CL52_RS03845 NONE
CL52_RS03850 NONE
CL52_RS03855  861384 ..  861398 +  -3.4  -3.16564   GCGGCGAACATCACC               CGGCCG ACC TGGCGG               TTGATCGGGTGGCGC  44 429
CL52_RS03880  865304 ..  865331 + -24.2  -3.24245   GTGCTCAAAACGACA        GAGCCCCGCCGG GTGA CCGGCGGGGCTC         TTGCCTTATCGCTAG 100 200
CL52_RS03915  874138 ..  874168 + -10.5  -4.58395   TAATCACCGGTCGCT      CCAGGAAAGCCCGC GCAA GCGGGCTTTC-TGC       TTTTTGCGCCGTGCC  95 38
CL52_RS03920 NONE
CL52_RS03925  875406 ..  875447 +  -6.5  -3.40403   TCGTAGGTGGGGATG CTGCCGTGGCGGTGCAGC ACCGCCA GCAGCATGGCCA-GGCGG TTCTGATCCAGGCCC  55 361
CL52_RS03935  877111 ..  877128 +  -6.3  -4.17023   GGGCAATCTCGTCCT             TG-AGCGC GAC GCGCTGCA             TTTTCAGCTCATTGA  70 150
        mscL  877961 ..  877997 +  -8.6  -4.12188   GGGCTGAACGGCCGT   CGACGGACGGCGCCCCG CAAG CGGGGCG-CGTGCATCC    TTTTGGCGATGATCA  76 34
CL52_RS03955  881743 ..  881757 +  -2.1  -3.19642   TTGTCTGCGGATTAG               GAGTA TTTGC TGCTC               TTGATCCATGCTGAT  43 82
CL52_RS03960  882266 ..  882280 +  -2.1  -2.78816   CTGCGTATACTCGCC              GG-CAG CCGT CTGACC               TGTAGTGGAACCTCA  39 107
CL52_RS03965 NONE
CL52_RS03970  883143 ..  883174 +  -5.8  -4.34402   GGTAGCGGTGAGGTC      GGGTCGGGGCGACTG TGC TAGTC-TGCCGGCCC      TTTTAATCTGCAAGC  71 36
CL52_RS03975  884084 ..  884104 +  -5.5   -4.4715   TCCACAATTAGATTT            CGATAATGA GAA TAATTATCG            TTTTCTAAATTGCAA  74 293
        rplU NONE
        rpmA  886008 ..  886027 + -11.4   -5.7827   GGCGTTGCTGGAAAA            GCCCTGTC ATGC GACGGGGC             TTTTTTGTTTGTATT 100 45
        cgtA  887359 ..  887371 +  -2.6  -3.58726   TGAAGAGGGTGAGCG                CTGC TTCAT GCGG                TTCTGTGTGGGGCGC  49 38
        proB NONE
CL52_RS04010  889051 ..  889065 +  -8.5   -5.0133   ATGGGCATGAAAAAA               CCGGC ACTAG GCCGG               TTTTTTCGGAGCATC  93 66
        murJ  891156 ..  891174 +  -3.8  -2.78715   CGGTTTAAGCCTGTC             CGCAGG GGTGGGG TCTGCG             TATAATCGGCCACTT  42 54
        ribF NONE
        ileS NONE
        lspA NONE
        fkpB  895969 ..  895991 +  -6.1  -3.61178   AGGCCAGCCTGACCC           GCCCGCCGG CGTGT CCGGCGAAC           TTTCCAGTGCGTGCC  57 29
        ispH  897330 ..  897373 +    -6   -3.9941   TAGGCCAAGCTTCCC CGCAG-CGCGGACAGCGAGC CGGCAA GCT-GCTGCTCGCGCCTGAG TTTGCTTGTGCCAGG  64 395
CL52_RS20540 NONE
        pilV NONE
CL52_RS04055 NONE
CL52_RS04060 NONE
CL52_RS04065 NONE
CL52_RS04070  903729 ..  903747 + -11.7  -5.79595   CAGCTGATGTATAAC             GGGCCAC TTTTC GTGGCCC             TTTTTTATTTTCGGG 100 48
        thiO  904920 ..  904944 + -13.6  -3.61946   GGTAAATTTGCGCAT         CA-CGGCCCGC ACTG GCGGGCCGCTG          TCTTTCTGTGAGGTC  81 84
CL52_RS04080  905406 ..  905425 +  -7.8  -4.72272   ATCGTTGAACTCGCG            TCGCCAGC CGAC GCTGCCGA             TTTTTCCTAGGGGAG  86 94
        speA  907845 ..  907866 +  -2.9  -4.59773   CTGCGATGGCGTAGG           CCATTTCAG TGTC CTGTAACGG            TTTTTCCGGGTGACG  71 510
CL52_RS04105  910717 ..  910737 + -10.4  -2.71924   CCTGCTCTATGCCTT           CGAGCGCCG CTGA CGGCGC-CG            CTTTCAGCCGCGCTG  60 13
        ptsP NONE
        pfkB NONE
CL52_RS04150  920596 ..  920630 +  -4.8  -4.03413   GGGCTGAACTAAACG     GCCTGCCGCCGTATCC ACT GAATGCCGGGGGAGGC     TTTGTGTCAGAACGT  63 55
CL52_RS04155  923156 ..  923190 +  -5.5  -3.72576   AACTCCGCCCCCTCA     CCCTAGCCCTCTCCC CGAAT GGGAGAGGGGACCGG     TTTCGTGCAAGCCGA  60 95
CL52_RS04175  927496 ..  927514 + -13.1  -4.34402   CCGCCGGTTGAAGAA             CGCCCCG CTTGC CGGGGCG             TTTTCATGTCCGGGC  95 47
CL52_RS04190  931374 ..  931399 + -19.1  -3.12999   GATCGACGCAGACAA         GAAAGGCCGCC CTTG GGCGGCCTTTC          TTGCATCTGAAGTCA  93 39
        norR  935330 ..  935346 +  -2.1  -3.11786   CCTGGGCGGCGACTC              CCGGCGC GCC GTGGTGG              TCTATCTTCAATCTG  43 62
CL52_RS04220  935690 ..  935724 + -12.2  -3.67792   CTGTTTGCCATCAGC    CGGGCGACGCT-TGCG TCTGT CGCACGGCG-CGCCCG    TTTCCATACGTCTAG  75 124
CL52_RS04225 NONE
CL52_RS04230 NONE
CL52_RS04235  938187 ..  938199 +  -9.1  -3.29471   GCGCATGCGGTCGCT                GGCGA TGA TCGCC                TTCATGTCCTCGAAC  61 76
CL52_RS04250 NONE
CL52_RS04255 NONE
CL52_RS04260  942690 ..  942715 +    -6  -3.14132   AGCGCCGCGCGTGCC         GGCTGCGCCC AGTCCA GGGCCAAGCC          TTCGTAGCGCAGGAG  51 235
        mdtD  947346 ..  947387 +  -2.1  -3.98913   GTAGGCAGGTGCGCT TTCGAGCCGTATCAGCCGCG GTA CGCCGCCGGTGCG-CACCAA TTGTTTACCTGTGCA  57 82
CL52_RS04290  947763 ..  947780 +  -4.7  -2.79796   TCAGACCTCCGGTCG             GCGCATC TTGC GGCGCGC              TGTGCTAAGGTCCGC  44 45
        sugE  948225 ..  948239 +    -7  -3.12895   CGGGTACTTTGCCGG               CCGCGC CTG GCGCGA               TATGTTGATCGAAGG  53 61
CL52_RS04300 NONE
CL52_RS04305 NONE
CL52_RS04310  950808 ..  950836 + -16.8  -3.08032   GGACGCAGTGAGCAT       CGACGGCCCGGCT GACT AGC-GGGCCGTCG        TCGTTTTCCAAGCGC  84 45
CL52_RS04315  952757 ..  952774 + -14.1  -4.34223   TAGGGAGAAAAGAAA             GCCCGGC GATA GCCGGGC              TTTGTTCATTCGGTT 100 74
         fur  953815 ..  953834 + -12.1  -5.04601   GGTCGATACCTGAAA            CCCCGCC CATAGT GGCGGGG             TTTTTCATTTATGGC 100 48
        grpE NONE
        dnaK  958373 ..  958396 + -14.6  -4.18494   GGGGTTTCCAGGGAT          GCGGCAGCGCC TCG GGC-CTGCCGC          TTTTCGCTCCAGCTC 100 59
        dnaJ  959638 ..  959674 + -22.3  -3.06831   CGACGTGTGAGTGCC    GGCCGAAGGCTGCCGCG ATG CGCGCAAGCCTTCGGCC    TTCCGTGACCCTTGG 100 31
        dapB  960616 ..  960643 + -14.2  -5.07567   GAATCAAACAAAAAA        GCGGGATGACCT TCAT ACGTCATCCCGC         TTTTTTACAATCTGC 100 134
        carA NONE
        carB NONE
        greA NONE
CL52_RS04370  966331 ..  966347 +  -4.3  -4.14243   CGAGCTCTGCCAGAA              CGCCTTC GCT GAGGCCG              TTTTCCGCTACGATC  62 255
        rlmE  967251 ..  967266 +  -3.2  -4.17048   GTCCGTGTTGCGGAC              CTGCTC CAGA GGGTAG               TTATTTTGAACGACA  61 139
        ftsH NONE
        folP  970039 ..  970056 +  -6.9  -3.53761   TCGTCAGAATGATTG             CCGCGGT CGAA AACGCGG              TTTAGGGAAGGATTC  57 3
        glmM  971418 ..  971450 +  -3.4  -2.71712   AATAACAGGCTTGCC     AGGGTGCGGGTCGTT GAGT AAC-ATCTGCGCCCA      CTTTGACCGACGAGG  40 36
        tpiA NONE
        secG NONE
CL52_RS04410  972703 ..  972719 + -10.8  -4.67968   GTACCAAACAAGTAG              GCCCGC CAAGT GCGGGC              TTTCTTGTTTCTTGA 100 35
CL52_RS04415  972864 ..  972880 + -12.3  -5.13741   ACCAGTTGATAAAAA              GCCCCTT CAA AAGGGGC              TTTTTATTAGCTTCA 100 37
        rimP NONE
        nusA  974943 ..  974969 +  -2.9  -3.33815   GCAAGCTGATCATGG        C-CGCCCGAGCC CATT GGTTCGAGTGAG         TTAATTAAGCGGCCT  46 0
        infB  977516 ..  977570 +   -16  -3.57792   CCACCCAGGCGGCAA GCTCAAGCGGCAAGCTTCAAGTGCGA CCTGT TC-CACTTGGCGCTTGCCGTTTG-GC TTTGCGGCTCGATGA  91 41
        rbfA NONE
        truB  978975 ..  978988 +  -3.8  -3.17051   GGGTGGCTGTCAGCA               GGCA CGGTCA TGCC                TCTTACTACTCACAC  47 69
        rpsO  979336 ..  979394 + -13.3  -5.18355   AGCTGGAAGCCTGAA GCTGGAAGCCTGAGGTTGAGAGTTGGAGC CAC GCTCC-GCTA-CAGCTTCGGGCTTTCGGC TTTTTGGTTTTTGCA 100 50
         pnp  981610 ..  981623 +  -9.5  -5.21709   GTTGCGTAAGAGAAA               GGGCC TTCG GGCCC                TTTTTTCGTATGAGC 100 48
CL52_RS04455  982255 ..  982272 +  -9.8   -5.4505   TAGCCTGTACTGAAA             CCCCGC GCCATG GCGGGG              TTTTTTATTGGCCCC 100 45
CL52_RS04535 NONE
        sfsA 1001768 .. 1001786 + -10.2  -2.78384   GCAATCATTCCAAGG             CGCACGCT GGC AGCGGGCG             TGTCATCGACGGGGC  60 222
        rfbD 1002732 .. 1002763 +  -5.1    -3.409   CTCGCCTGATTCGCG     CCGGCAAGCG-TGCG CCTG CGCGGCG-TGGCCGG      TATTCTTGACGCTTT  53 32
CL52_RS04550 1003731 .. 1003743 + -10.5   -3.1355   GTGAGTTCGAGAGAA                CGCCG GCA CGGCG                TTCGCTGTCCATCGG  64 45
CL52_RS04565 1007525 .. 1007551 +   -10  -3.92522   TGTCGGCAGGGTCGG         TGCGGGCGGCGC CGG GCGCTCCTCGCG         TTTGTGGCGTTGGGC  77 473
CL52_RS04630 1023028 .. 1023040 +  -4.7  -3.16647   GTTCGCTGGCGATGA                CGCTG GCG CTGCG                CTTTTCCTGGGTGAA  47 374
        mrcB 1028930 .. 1028940 +  -3.2  -2.60194   CTGGGTCAGGGGTTG                 GCTG CAG TAGC                 GTTGATTGCGCGGCT  39 16
CL52_RS04660 NONE
CL52_RS04665 1030208 .. 1030229 +  -7.2  -4.00476   TGCGCTGTGCCTCTT           GCTCGGCG ACCTGA CGCCGAAC            TTTCTCGTCGATTTC  66 197
CL52_RS04675 NONE
        ilvN NONE
        ilvC 1034198 .. 1034213 + -11.8  -5.37593   CATGATCTGAAGGAA              CGCGGC CAAG GCCGCG               TTTTTTCGTTTAAGG 100 45
        pssA 1035172 .. 1035220 +  -4.4   -3.6761   GGTTGATTTTTCTGC CCGAAG-CGCGCTCCATGGTTGG GCTG CTAACCCTGGAGCGAGGCGACCG TGTTTATTCGCAAAC  53 35
        msrP NONE
        msrQ 1037312 .. 1037329 +  -2.6  -4.46233   CAGCAGCACAAGTAA             CACTCG TGAATT CGAGAG              TTTATTTGCGATTGC  65 505
CL52_RS04705 1038925 .. 1038939 +  -2.8  -3.21912   ATCACCTCCTTAATC               GAAGAT CTC AGCTTC               TTCATAAGTTCCCAC  44 29
CL52_RS04710 NONE
CL52_RS04715 1039189 .. 1039220 +  -2.4   -4.1043   GTTAGAGTTTAGAAA      TGAGCATTT-TCAGC CTG GCTGATGAATGTTGA      TTTCTGGTCTTTACC  57 47
CL52_RS04720 NONE
         rrf 1042557 .. 1042592 + -23.4  -3.34398   GTCAAGCACCTATAC    CAAACCCCCGACCCGC ACTC GCTGGTCGGGGGTTTG     TCTTTGCGCAACGGG 100 34
CL52_RS04730 NONE
CL52_RS04735 NONE
CL52_RS04740 1046347 .. 1046362 + -11.8  -4.87291   ACGCACGCATGAAAA              GGGCCC CTCG GGGCCC               TTTTTCGTTGCGGTA 100 80
CL52_RS04760 NONE
CL52_RS04765 1054016 .. 1054041 + -18.3  -4.61873   CACGTGAGAACGAAA         GGCCCCGCTGC TCTG GTAGCGGGGCC          TTTTACTTTGTCCGC 100 56
CL52_RS04770 NONE
CL52_RS04775 NONE
        rimI 1057447 .. 1057486 +    -7  -2.57931   CCAGACCCCACCCGA  CGTTCGGGCGCGGCAAGCG GCT CGGTCACT-CGCCCGGACG  CTTGTCGCGGCTGGA  48 384
        otsB NONE
        otsA NONE
         can NONE
CL52_RS04805 NONE
CL52_RS04810 1062185 .. 1062206 + -12.3  -5.72622   CACCATACAAAACAA           GGGGTTAGC GAAA GCTAGCCCC            TTTTTTGTTTGTGCC 100 36
CL52_RS04825 NONE
CL52_RS20555 1065908 .. 1065943 + -19.2  -4.28018   TGTAGCCACCATATA    TAGAAAGGGGGTTAGC GAAA GCTAACCCCCTTTCTC     TTTTGCTCAACTGTT 100 181
CL52_RS04865 1075886 .. 1075913 + -15.6  -3.14132   CTCCACAAACGCGAA        GGCCCCG-GCGTT TCG AGCGCGCGGGGCC        TTGGTGAAGCGGGCA  83 44
CL52_RS04870 1076437 .. 1076459 +  -2.6  -3.73224   GTCGAGGGTCAGGAT           TTGACGATGC GCA GCGTGGGCAA           TTTGCTGGACGCTGG  52 58
CL52_RS04875 1077521 .. 1077532 +  -5.8  -3.78351   AAGGCTGAAACCCTT                GCCA GAGC TGGC                 TTTGGTGCCATTTCT  60 81
CL52_RS04885 NONE
CL52_RS04890 1080614 .. 1080659 +  -2.3  -3.59262   CTATAAGCCGCTTCT GACAGGGGGGATGGCTCTACT TGCT GGAGGCGCCATGCCGCTTGCC TTTGCCCCTGTGGGC  49 286
         lnt NONE
        lspA 1082728 .. 1082738 +  -8.2  -3.14344   CCTGGGCCTTGATAA                 GGCG GCA CGCC                 TTCATGAGCCAGCTG  58 91
CL52_RS04920 NONE
CL52_RS04925 NONE
CL52_RS04930 NONE
CL52_RS04935 NONE
CL52_RS04940 1086665 .. 1086688 +  -6.6  -2.75528   CAAAGCCAACGCCAC          GGCGGCTGAT CTCC ACCAGCGGCC           TGATGTCTTGCACCT  47 67
CL52_RS04950 1089543 .. 1089553 +  -2.4   -4.1673   GGTGGTGACAGTGTG                 GTGC TGC GCCC                 TTTGTTACCACATTC  59 497
CL52_RS04955 NONE
CL52_RS04960 NONE
CL52_RS04965 NONE
CL52_RS04970 NONE
CL52_RS04975 NONE
CL52_RS04980 NONE
CL52_RS04985 NONE
CL52_RS04990 NONE
CL52_RS04995 NONE
CL52_RS20565 1103189 .. 1103205 +  -2.3  -3.82084   ACACATCATCTTGGT              CGATTTT CTG AAAATCA              TTGTTGATCTTGCAG  54 305
        hemA NONE
        prfA 1114520 .. 1114547 +  -2.6  -2.55213   CCAGGCCGACCAGTT        GGCC-TCTATCGG CGA CTGAGCGATGGCC        TCGATTCAGTCGCTG  38 7
        prmC NONE
CL52_RS05070 NONE
        murI NONE
CL52_RS05080 NONE
CL52_RS05095 1120567 .. 1120592 + -10.3   -4.3534   CGGCATTTTGATATT         GCCCGCAAAGC CAGC GCCTAGCGGGC          TTTTCATACTTAAGG  85 327
CL52_RS05100 1122614 .. 1122637 +  -2.4  -3.28924   GCCGATGCCCGGTCG          TC-GGCCTAAA AAT TTTCGGCCCGG          TTGTCGAACACGATC  45 62
CL52_RS05105 1124059 .. 1124076 + -14.1  -5.89921   GCGCTGATGAATCGA             GGCGGCC AATC GGCCGCC              TTTTTTTGTTGTGCT 100 53
CL52_RS05110 1127107 .. 1127134 +  -2.6  -3.93695   CGCCTTGCGCCCCGG        TCAG-CGTCAGCA GAA TGCTGCCGTCGGG        TTTCTCGATACTGAA  56 267
        secA 1131600 .. 1131630 + -19.7  -5.10968   CCAGGCAGGTATCCG       CGCCGCGACCGGC CAACC GCCGCTCGCGGCG       TTTTTCTCTGTTGAT 100 49
        argJ NONE
CL52_RS05145 1133981 .. 1133991 +  -4.6  -2.52933   TAGGCAAAGACAATC                 GGCG CTA TGCC                 CTTAATCAATTAACG  43 93
        ahpC 1134687 .. 1134711 +   -15  -4.30809   GTGCCTTCCCTATGA          CGCCTGGACG CGACC CGTCCGGGCG          TTTTGCTACCTGTTA 100 77
        ahpF 1136334 .. 1136358 +   -10  -4.72272   AGCGGCATGAAAAAA         GGGAGCGGACC GCAA GG-CTGCTCCC          TTTTTCGTCGAGCCG 100 49
CL52_RS05160 NONE
CL52_RS05165 1138842 .. 1138875 +  -4.5  -3.08679   GCGGCGCGCGATGTC     GGCGAT-CAGCCGC TGCTTGC GCGGCCGGATCACC     TCTTCGATCAGCCGG  47 448
CL52_RS05195 1144643 .. 1144662 + -11.4  -4.74103   CGATGCCCTGCCAGG            CGCCGGTA TCGA TGCCGGCG             TTTTTGCATTGAAGG 100 57
CL52_RS05200 1145546 .. 1145564 + -12.4  -5.44119   GTCGGATTAAAAAAA             GCCCGCAT CGA GTGCGGGC             TTTTTTTCAGCTGCG 100 60
CL52_RS05215 1148975 .. 1149026 +   -10  -3.21099   GATCTCCAGCGGCTT GCCC-ATGCGCCGGAGCGGAATACC GGC GGTCATCTTCTCCAGCGCTTCGGGC TTCATGCTGGCGACC  62 195
CL52_RS05225 1150530 .. 1150540 +  -4.6  -3.37344   GTCATCTATCGCTCA                 CTGG AAG CCGG                 TTGCTTCCGTCAAGG  50 90
        fxsA 1151035 .. 1151056 + -15.9  -5.07652   GATCGTCCCGTCCGA           CCGGCATGC CTTG GCATGCCGG            TTTTCTTTTGCGCGC 100 39
CL52_RS05235 NONE
        groL 1153269 .. 1153297 + -15.4  -4.84017   TGAGCCCTCGCTCCA        GAAGAACCCCGC CTCGT GCGGGGTTTTTC        TTTTTGTGGCGGATT 100 46
CL52_RS05245 1153908 .. 1153938 +  -7.4  -3.24924   CCCGCTTCGGTCACT       TGCGCGAGGCCAGC GTC GCTGTGCTGGCGCG       TGTTGTCGATCGCGC  56 298
CL52_RS05275 NONE
CL52_RS05280 1162223 .. 1162253 +  -4.6  -3.55622   CCTTCATGGCAGCCT       TCGCCGATCAGG TAGGCCT CCTGCTCCGCGG       TTTCCACGCCTTCGG  52 136
CL52_RS05300 1167384 .. 1167410 +  -6.6  -3.28712   GGCCTGGCTGATGCT        CC-ATAGCCCG GACGAG CGGGCTGTCGG         TTGTACGCACCGCGA  55 460
CL52_RS05310 1168437 .. 1168464 + -22.8  -2.53263   CGCCCGCTGAGGCCG        GTCGGGGCAGCC GGCA GGCTGCCCCGAC         TGGCTTACAGATCCC 100 31
CL52_RS05315 1170234 .. 1170244 +  -2.4  -4.09739   CCAGCTTGTGGTAGT                 GGGC GAT GGCC                 TTTTCCGCCCATTCC  58 295
CL52_RS05385 1184760 .. 1184772 +  -4.1  -3.62597   TGAGTGATTTCCAGG                TGTCA CCC TGACG                TTGTTCCAGGGTGAC  54 282
CL52_RS05400 1186281 .. 1186291 +  -3.2  -3.07013   CTACGTGCTGGACCT                 CTCG GCA TGAG                 TCTGTTGCCACGCTC  43 16
CL52_RS05405 1187708 .. 1187719 +  -2.2  -3.30159   AACACTATCGGCTGA                GCAGC GAG GC-GC                TTGTGGACCGCTTGA  45 88
         xth NONE
CL52_RS05415 1190298 .. 1190311 +  -6.7  -4.43309   CGATGCTTTCCAGCA               CCTCT CGGT AGAGG                TTTTCCTTGGACTTG  75 465
CL52_RS05425 1192712 .. 1192756 +  -7.6  -4.13767   AGCGTGATGGCGATT GGCGAGGCGCCTGCCGGCCT GGTGG AGCCTGGCGGGCGATGCGCG TTTTCCAATCGCCGA  72 107
        uraH 1204307 .. 1204322 + -11.8  -5.24531   TCTGGAGTCCCTTTA              CCCGCC TTAT GGCGGG               TTTTTTATGGGGAGT 100 64
CL52_RS05485 1208462 .. 1208474 +  -4.7  -4.09864   GCCCCCGCGTGGAAA                ACCGC TTT GCGGG                TTTTCCACCCTACAT  63 242
CL52_RS05555 NONE
CL52_RS05560 1229936 .. 1229953 +  -2.6   -3.5823   CCCGGTCCACTGGAG             CCTGTG CGGTTT CCCAGG              ATTTTTCTGCTTGGC  49 146
CL52_RS05565 1231310 .. 1231322 +  -6.2  -3.44051   GTCCACCGCCTCGAT                GGGC ACCTC GCCC                TTGTCGTCGTGGAGC  55 377
CL52_RS05575 NONE
CL52_RS05580 NONE
CL52_RS05585 NONE
CL52_RS05590 NONE
        dhbA 1240693 .. 1240703 +  -8.2  -3.66178   CGGCAGGAGATCCTG                 CCGC ACC GCGG                 TTTCGCCTTGCAGCA  65 463
CL52_RS05605 1246740 .. 1246750 +    -4  -5.08824   GTGCAATCTAGGCCG                 TTCA TTT TGAA                 TTTTTTAAATACAGG  81 516
CL52_RS05660 1261347 .. 1261370 +  -2.4  -3.09844   CTCGACGGTAAAGGT          CTT-GCCCG AATCCAC CGGGCCGAG          CTTTTCCAGTGTGCG  42 68
CL52_RS05715 1269812 .. 1269837 +  -4.5  -3.72788   CCCTGGCCGTTCGGC         CGGGAGGGGCA GGCA TGACGCGCCCG          TTCTGTCTTCTCGAC  56 103
CL52_RS05720 NONE
CL52_RS05725 1271723 .. 1271755 +    -4  -2.90723   AGCGCGCGCGTGTGG     CGGCGCTC-ACACCC TCGA GGGTGGCGAACGACG      TGTCCTTGGCGGTCA  44 45
        metE 1275181 .. 1275202 + -10.1  -2.78816   GGCGGCCTGAAACGC           GCC-GCGCGT CAG GCGCGCAGGC           TCTGATCGAAGCTGA  60 31
        ybaK 1277527 .. 1277551 + -12.1  -2.91274   GTCTTGCTGTACCAC          TGCTTCTGCGC CAG GCGCGGCAGCA          TCTGCTTGACGTCGA  66 229
CL52_RS05755 NONE
CL52_RS05760 1280369 .. 1280400 +  -7.8  -2.52464   ATCGGCTGGAGGCGC      GCTGACACCTGGCG AGGC CGCCTGCTGCCGGC       TGCGTTGCGCCGCGA  50 21
CL52_RS05780 1284601 .. 1284611 +  -6.8  -5.00616   AAGCCATGTAAAAAG                 CTGC CGA GCAG                 TTTTTTGGAGCCAGA  86 261
CL52_RS05785 1285156 .. 1285167 +  -2.2  -3.55622   CACCGGCAGCTTGCG                CTTG GGAT CGAG                 TTTGCCGAGATTGCG  48 362
        lptF NONE
        lptG 1298691 .. 1298724 + -12.3  -3.84639   GCGGGCGGGGTGATG     GCAGGCCCCGTCTCC GGTC GGCGGCGGGGCTTAC      TTCTTGTGGATGTTC  81 28
        queA NONE
         tgt NONE
        yajC 1302752 .. 1302777 +   -14  -2.71144   CTTACTCAACATCTA         CGACGGGGCGC GCAAG GCGCCCCG-CG         TCATTAGACGGGCTG  72 46
        secD NONE
        secF NONE
CL52_RS05885 1306223 .. 1306256 + -23.3  -3.89346   CGAGGCTGCTGTAAA     CAGAAAGCCCCGGTC ACTT GGCCGGGGCTTTCTG      TTTCTGCGCTAACGC 100 61
        trmJ NONE
        cysE 1308865 .. 1308880 +  -2.5  -3.05596   AGGGCGAGTGGTGAT              TGAGC GGCCCG GCTCG               TTCAATACCCGACTA  41 83
        iscR NONE
CL52_RS05910 NONE
        iscU NONE
        iscA NONE
        hscB NONE
        hscA NONE
         fdx NONE
        iscX 1314518 .. 1314536 + -10.2  -4.40298   ATGTTTTGACCTGAA             CCCGCGTA TGA TTCGCGGG             TTTATTCATTTGCAT  95 90
         ndk 1314989 .. 1315000 +  -2.2  -3.07816   TCTCCGCCACCGAGC                TGTG CGAT CGCA                 TTCGCTGAGTGAGCG  41 6
        rlmN NONE
        pilW NONE
CL52_RS05960 NONE
        ispG NONE
        hisS NONE
CL52_RS05975 1321071 .. 1321081 +  -4.6  -3.66178   CTGGCCAAGGGAGAC                 GCGT GAT GCGC                 TTTAAGATTGCCGCG  55 20
        bamB 1322271 .. 1322291 + -18.3  -3.57825   GCCACCGAATTTTGT            GGCCGCTGC CTT GCAGCGGCC            TTCGTGTTTTCTGAA 100 72
         der 1323848 .. 1323868 +  -8.1  -2.52896   GCACGCGCAACCTTG            CTGGCGGGC ATT GCCCGCCTC            TGGATTGACGGATGA  53 65
CL52_RS05990 NONE
CL52_RS05995 1325896 .. 1325934 +  -2.4  -3.89336   GTTCGTAGTCGTGCA  TCGCCC-GTTCGGCG CTGCTGAGTT CGGCGAACCGGGCCA   TTTCGATTTCGTTGC  54 111
CL52_RS06035 NONE
CL52_RS06040 1334661 .. 1334686 + -18.3  -2.79796   CTTCTGAGCCGGCAG         GCAGCGCGGGC TTCG GCCCGCGTTGC          TCTCGTAGGCTGGCG  86 34
CL52_RS06065 NONE
        guaB 1341296 .. 1341317 +   -13  -3.00525   CTGGAATGTGAACAA           CGGGGCTG TTCGAT CAGCCCCG            TGTCATTTGCGAACA  71 81
        guaA 1342940 .. 1342963 + -16.8  -2.63102   GAGTGATCTGACGCA          TCAGGGCAGC CAAG GCTGCCCTGA           TGCTATCGGGGTCGT  80 35
CL52_RS06080 NONE
        tadA 1344865 .. 1344889 +  -7.8  -2.62184   AGCGCAGGCAGAACG         GCCG-GGACGC CTGA GCGTCAGCGGC          TGCTGTAACGGCGAA  51 12
        grxD 1347561 .. 1347584 + -12.4  -5.80364   CCGGCCAATAAAAAA          CGCCATGCCC TTGC GGACATGGCG           TTTTTTTATTGCGGT 100 77
CL52_RS06115 1349833 .. 1349887 +  -4.9  -5.00616   CGCAACTGCATCCGG GTTGCCGCGTAGCCTGGCGAGCCGGTG CCC CTGCGGTTTGCTAGACT--GCGGCACC TTTTTTCGGCGGCGA  83 14
CL52_RS06120 1350493 .. 1350503 +  -2.4  -2.85847   ACCCGGTCAGGGCTG                 ACCG ATT CGGG                 TATCCTCTGCGGCTT  40 66
        recJ 1352291 .. 1352305 +    -7  -2.60813   GTTGAGGCCATTGCC               CGGCTG AAT CCGCCG               ATATTTCGCCCACTC  48 36
CL52_RS06130 1354486 .. 1354511 +  -2.5  -3.21934   GGAGGTCGCGGCGGT         CTAGCACCCGCT GAA AGTCGG-GCTGG         GTTTTCTCGGCGAAA  43 22
CL52_RS06135 1355664 .. 1355684 +  -2.4   -3.2822   CGACACGCCGATTCG            CCAGGTGC CCGAC GCACAGGG            TTGATCCGTTTATTT  45 1
CL52_RS06140 1356458 .. 1356512 + -12.8  -2.64099   CGTGATCGCAGGTCG GCCTGCCGCTGGGCCGCCGA-GGCTC TCGGC GGGCTGTCGGCG-TCGGGCGGCTGGC GTTATACTCGCGGGC  67 36
        prfB 1357637 .. 1357649 +  -3.3  -2.87211   AGTACCTCGAGGCCA                GCCTG AAG CAGGG                TCTGTAAGCCGGGGT  42 6
        lysS 1359299 .. 1359336 + -12.6  -2.62616   TGCGACCCCTGTCCC   GTCG-CGGCGCGGCCGG AGTTG CCGGCGGCGGCGTCGGC   TCGTATACAGCCTCG  67 67
CL52_RS06155 NONE
CL52_RS06160 NONE
CL52_RS06165 1362182 .. 1362194 +  -2.6   -3.9777   CCCGCGCTGGCGGTA                GCTG ATGCC CGGC                TTTGTGCCTGTTACG  57 21
CL52_RS06170 NONE
CL52_RS06175 1363117 .. 1363143 + -17.2  -3.14132   ATCGCGCATGAAAAA         GGCCCGGAGCGC TGA GCGTGCCGGGCC         TTGGTCAGGACGAGA  89 68
         ppc 1367906 .. 1367916 +  -4.6   -3.9777   TCAGCCGACGTTGCT                 GGCG ACA TGCC                 TTTGTAAATCTTCGA  63 222
         adk 1368611 .. 1368628 + -14.1   -4.8622   GGTCAGCGTTCGAAA             CGGCCCG CTTG CGGGCCG              TTTTTCGTTGCAGGC 100 47
        tsaB 1369422 .. 1369441 +  -4.2  -2.87881   GTCAAAGCCGGTGCC            GCCC-GCTA GAG TCGCCGGGC            TCTCTCAACAGGTTG  44 52
CL52_RS06210 NONE
CL52_RS06215 NONE
CL52_RS06220 1371432 .. 1371454 +  -4.1  -3.53012   AGCGCATGGCGGCGG           GTCGCTC TGGCACAAT GAGCGGC           TTTCCCGCCCAGGCC  51 39
CL52_RS06225 1372700 .. 1372715 +  -7.5  -2.89447   GGTCGATTTAACTGC              GGCGC AGAACA GCGCC               TCCTTGTCCTTGAAA  52 477
CL52_RS06235 NONE
CL52_RS06240 1377552 .. 1377599 +  -3.8  -3.14132   CGCTTCGCGTGGCGG CAACGCCGCGGCACGCTGGTGC AGGC GCTCGAGTATGACGCGGTGCCG TTCCTGCAGGACGGC  45 399
CL52_RS06250 1378744 .. 1378762 +  -2.3  -2.81464   CGAATGAGGGTTTGC            CGGCGACG ATCG CG-CGCCC             TATGGTGCGTCATGC  39 34
CL52_RS06255 1379620 .. 1379650 +   -16   -2.5805   CTGACCGCGGCCACT       CGCCGCTCCGCCGG CAT CCCCCGGGGCGGCG       CTTGTGGCGCATAAT  80 37
CL52_RS06260 NONE
CL52_RS06265 1381063 .. 1381097 +    -7  -4.07568   TCGACGCCGGCTGAG    CCGCTCGCGCGAGGG GAACGA CCGACGC-CGGGCGG     TTTTCAAAACCCGGC  67 27
        wrbA 1381756 .. 1381797 + -19.6  -2.87132   TCAAGGGTTGAGGGG C-CGGCAGGGCGGCTC-GAC AGCT GTCCGAGCCGCCTTGCCGCG TCTATAGCCAACCCC  93 30
CL52_RS06320 NONE
CL52_RS06325 1391922 .. 1391965 +  -5.9  -3.29461   CATCGGCGGGCTCCA CGCACAG-GCT-CACCGTGGT GCCC GCCGCGGTGTGGCGCAGGGCG TTGTCCAGCAGGTTG  53 236
        dsbD NONE
CL52_RS06345 NONE
        dsbG 1397232 .. 1397244 +  -4.7  -4.09864   GGGGTGGCGTGGAAA                AGCGC TGC GCGCG                TTTTCCACCCTACGT  63 124
CL52_RS06390 NONE
CL52_RS06395 NONE
CL52_RS06400 1408832 .. 1408880 + -11.7  -3.53012   CGCCGGGCGTGACAG GCTTGC-C-GGGCAGGGCGTCGC GCACG GCGACAACCTGCCCGGTGCGGGC TTTCAACCGGCAGAC  74 29
CL52_RS06405 1409257 .. 1409275 + -13.8  -4.13654   CGCTATAAGCACAAA             GCCCGCCG TGA TGGCGGGC             TTTGTCGTTTCCGGG  93 48
        tcdA NONE
CL52_RS06435 1417158 .. 1417175 + -14.1  -5.52384   TAACGCTCCCTTGAA             CCCCGCC GACT GGCGGGG              TTTTTTTCGTCGCCG 100 69
CL52_RS06440 1418341 .. 1418359 + -11.6  -3.29511   CCAGGGCTGAACGAA             GCCGGCCG ATG CGACCGGC             TTGTGCCAGCCTCAG  72 31
CL52_RS06475 1425436 .. 1425453 +  -5.5  -4.07568   ACGCGCTGCGGTTTT             CCAGCCT ACGC AGCCTGG              TTTTCGCCAGGGCGC  65 296
        ttcA 1429306 .. 1429343 +  -8.9  -2.90392   CCCCCTAGCAAGCTT   CTTCGCCAGGCGGGTTG AAAG CCGCACGCCCGGCGGGG    TATGGTTCGGCCATC  55 136
CL52_RS21610 1429557 .. 1429582 + -21.9  -5.55855   ACGTTTTCCAAGAAA         CCCCCGGTCGG CAAC CCGACCGGGGG          TTTTGTTTTTTTCCG 100 81
CL52_RS06510 1431046 .. 1431090 +  -9.1  -3.14132   TCGGGCCCTGTCGGT GGCTCGCTGTGGAAAGATCGC CGT GCGTGCTTTCCACCCTGCGCC TTCGTCGGCAGGAGG  61 222
CL52_RS06515 1431925 .. 1431939 +  -5.6  -3.60971   CCTGCGGCGATGCTG               CGACGC TTT GCCTCG               TTTCGCCGTTGCGGT  57 50
CL52_RS06520 1432372 .. 1432391 + -12.8  -3.96327   AACCTTGCCCGGTCT            CCGGCGGC TTCG GCTGCCGG             TTTGTCGTGCCGCGT  83 51
CL52_RS06525 1433180 .. 1433198 +  -5.2  -3.70919   ACGAGTGCGCAGGGC             CTGCGGCA GGC TGTCGCAA             TTGTTGCCGTTTCGC  58 218
CL52_RS06530 NONE
CL52_RS06535 NONE
        cydB 1436393 .. 1436408 + -11.8  -2.84098   CGCAACGCCGGTTCG              CGGCGC ACCT GCGCCG               TCCTTAATTCAAGCG  67 56
        cydX NONE
CL52_RS06550 1436900 .. 1436935 +  -5.4  -3.89881   TGGGCTATTGGATTC    TGGCTCGAGCGCTGCTG GGG TAGCGGCGCTAGA-CGA    TTTGTCGCAGTTCAT  60 3
CL52_RS06555 1437716 .. 1437732 +  -4.3  -2.90813   CACCGATCCAGCGGT              GCCGGCA GAG TGATGGC              TCATTTGCCAGGATC  44 65
CL52_RS06560 1438675 .. 1438720 + -12.5  -2.58579   CAGAGGTCGCCTGCA GACGGCG-GGTCACTGCGGCTC GCT GCGCGGCGGTGATCGCGCCATC CTTGTGGCGCCTTGG  64 423
CL52_RS06590 1443308 .. 1443325 + -14.1  -3.37344   GTCTTGAAAGCAAAA             CCCCGGC CGAA GCCGGGG              TTGATTGCATCAGAA  77 43
CL52_RS21425 1445154 .. 1445194 +  -6.2  -3.55368   AATCGCGGCTGTGCT CGGGCGTCGAGCAGCTGG AAATCCG CTAGCTG-TCG-CGCCAG TTCTGTGGCTTCGAT  56 461
         rnd NONE
CL52_RS06610 1447263 .. 1447282 +  -2.1  -2.52676   CAAGGCCGGCTGGCA            GACCAAG GCTATG CTTGCTC             TGGGTTGGAACACTC  37 65
CL52_RS06615 1447763 .. 1447782 +  -7.8  -3.38046   GCTTGGCCGTGCCAT            GGCCAGTC GCTA GACTTGCC             TCTTTGCAATAGCGG  58 82
CL52_RS06620 NONE
CL52_RS06625 1449725 .. 1449739 + -11.4  -4.09739   ATCGCTCGGCGGTGC               CGCCAC CTC GTGGCG               TTTTGCAGCCGTTCG  82 221
        alaS 1452397 .. 1452407 +  -5.4  -2.53345   TTCGTCGAGCAGGGA                 CTCT GAA AGAG                 GTGTTGCTGTATCCG  43 20
CL52_RS06635 1453847 .. 1453859 +  -4.8  -5.38549   TGGCTATATGTCTGA                CGGA CAATA TCCG                TTTTTATTCTTTGCA  91 140
        csrA NONE
CL52_RS06645 NONE
CL52_RS06650 1454420 .. 1454434 +  -5.6  -3.85698   CGCCATATCATGAAG               CCTCGT TCT GCGGGG               TTTATGAAGCCAGGG  62 36
CL52_RS06655 1454559 .. 1454580 + -15.9   -5.4833   TGCGCCATTTGAAAA           GGGCCTGCA GAAA TGCAGGCCC            TTTTTTATTGGCTAG 100 34
        mgtE 1456853 .. 1456871 + -13.1  -5.76633   CGCTAGCACAAAAAA             GCCGGCG AACAA CGCCGGC             TTTTTTTATGTCTCG 100 54
CL52_RS06685 1458263 .. 1458278 +  -5.4  -4.02736   GGCAGGCGGGTTCAA              GCGAACG GCG CGT-CGC              TTTGTCGTCTGGCTT  63 101
CL52_RS06710 NONE
        cheR 1462659 .. 1462688 +  -9.3  -4.16921   CCTCTCGGTCGCTCG       GCGGCAAGCAA GGCGGTAA TCGCTTGCCGC        TTTTGACGCTTCTTC  79 57
        flgB NONE
        flgC NONE
        flgD NONE
CL52_RS06735 1465887 .. 1465916 +  -9.9  -4.19817   TATTCCGCCGCTTTA       CCCGCAGAGGCCC GAAA GGGCCTTTGCCCG        TTTTGAATAACTAGC  81 80
        flgF NONE
        flgG 1467590 .. 1467602 +  -4.7  -3.28791   ACCCAGCAGCTCTGA                CGGGC GCT GGCCG                TTGTAGGCGGGGCAT  50 26
        flgH NONE
CL52_RS06755 1469448 .. 1469459 +  -2.2  -2.67747   CAGGCCGGTGCGTTG                CAGG CCGA TCTG                 ATTGTGATCTAAGGG  38 2
        flgJ NONE
        flgK NONE
        flgL 1474060 .. 1474070 +  -3.2  -4.07568   GAAAATGACGCTTCT                 GCGT TCC ATGC                 TTTTGGCAACCGCGC  58 169
CL52_RS06775 1474370 .. 1474389 +   -15  -2.98942   CATCTGTGAAGGAAA            GGCGGACC CGTT GGTCCGCC             TGTCTCTCGAACCCT  78 32
CL52_RS06780 NONE
CL52_RS06785 NONE
CL52_RS06790 NONE
CL52_RS06795 1476426 .. 1476445 +   -10   -2.7185   GAACGTCGATAACAT            GCAGGCTG AAGC CAGCTTGC             TGCTTCGCGAGTCGT  57 51
CL52_RS06810 1481484 .. 1481510 + -12.2  -2.78679   GCTGGAATGATCACA         AGGCGCCGGC CTTCTCT GCCGGCGCCC         ATTTCGCTACGGCAG  66 31
CL52_RS06840 1487114 .. 1487132 +  -5.9  -3.14881   GAGGCTGTTGGCCAG             CGTCGGC ACTTC GCCGAGG             TTGCTGAAGAAGTTG  51 468
CL52_RS06855 1489415 .. 1489428 +  -8.1  -3.30159   CAGTCCCTGCCCAGG               CCAGC GCCT GCTGG                TTGTCCAGCCCTTCC  56 93
CL52_RS06865 NONE
CL52_RS06870 1493293 .. 1493310 + -12.7  -5.32944   AGCGGTAATGAAAAA             GGCAGCC TTCG GGCTGCC              TTTTTTCGTTCTGCG 100 45
CL52_RS06875 1494343 .. 1494353 +  -2.4  -3.22774   TCGTGAGCAAACCTT                 CCCG CGC CGTG                 TTGATGCTGGCTCTG  43 118
CL52_RS06880 1495485 .. 1495501 +  -4.4   -3.2614   CGGCACTAGCGCGGG             GCAGAGC TGTG GC-CTGC              TTCATATCCCGCCTC  48 32
CL52_RS06885 1496155 .. 1496173 +    -8  -3.36327   GGCCACGCGCGTGTC             CAGCGGCG TCT CGTCGCCG             TTGTCGGTGCCCTCG  59 161
CL52_RS06915 1505056 .. 1505067 +  -3.6  -3.21416   GTTGAACATTGCCAG                CGGT ATCG GCCG                 TTGCTGATGCAGGTC  45 338
CL52_RS06925 1506382 .. 1506395 +  -3.1  -3.33922   CACCAGCAGGCAGAA               GGC-GA CGA TCAGCC               ATTTTTCCGGCACGT  46 473
CL52_RS06955 1513971 .. 1513990 +  -7.8  -2.85847   GGCTAACGGCTATGC            CCGTCATC GGAC GATGCCGG             TATCATGTGCGCCTT  53 86
        cysM NONE
        rlmD 1516376 .. 1516390 +  -7.1  -2.70932   CGCGTAATTTTTTGA               CAGGC ATCTG GCCTG               TGGTTCAACCGACCG  49 34
        relA 1518775 .. 1518797 +  -3.4  -3.39216   CACTCCCAGTTGGCC           TGACATTCGT AGC GTGGATGTCG           CTTTTTACATCCACC  46 94
        mazG 1519724 .. 1519753 +  -3.4  -3.35586   CATCCACCACAATCC       CGGGCTGGATCG CTGAAC CGATCCCCCGCG        TTCACTTTGATTTCA  46 70
CL52_RS06980 NONE
CL52_RS21315 1520697 .. 1520723 +  -7.8  -4.36914   GCAGGTCCGGCTGCT         GCGGGCCGATCG GCA CGACCGGCGCGG         TTTTCTCGAACCACA  77 148
CL52_RS06990 1522607 .. 1522664 +  -9.9  -3.05596   CATGGTGCGTCGGGT GTGGTT--CGGGCTCATGCTGCAGGGC GAACGG GCCCAGCAGCAGGGGCTCGCCAACGAC TTCGATGCCCAGCTC  60 234
CL52_RS07035 1537227 .. 1537246 +   -15   -5.4505   GGTCGCCAAAGAAAA            CGGGAGCC TCAG GGCTCCCG             TTTTTTATTACCCAG 100 49
CL52_RS07040 NONE
CL52_RS07045 NONE
CL52_RS07050 NONE
CL52_RS07055 NONE
        nqrE NONE
        nqrF 1543370 .. 1543413 + -22.4  -3.24232   ATCAAAGCGCTACTG CAGCCCGTCTTGACTGCCGC TCTC GCGGCAGCCCTGACGGGCTG TCTGTTTCAGGACCG 100 45
CL52_RS07070 NONE
        nqrM 1544659 .. 1544682 +  -9.6  -3.55761   TGAAGGATTGTTTGG          TGCGG-CGCTA GCG TAGCGACCGCG          TTTGGGGAGTACATA  68 83
        sthA 1546215 .. 1546240 + -19.7  -4.67641   GCTGCCAAGCGTCCA         GGCCCGTCGGC ATCC GCCGGCGGGCC          TTTTCGTTTTCCGCT 100 149
CL52_RS07100 NONE
        lolD 1549894 .. 1549921 +  -3.4  -3.24329   GGATGGCCGCCTGGT        GGCTGAAT-GATG TTT CGTCCGCTCAGCC        TGTTCATTGGCAGTC  44 16
CL52_RS07110 1551390 .. 1551445 +  -5.3  -3.12351   AGTTGCAATAAAACA CCGGCGGCATCGTCAGCGGGTTGGTC AGCCA GACCAGGCCGATGGCGAT-CGGCAGA TTGGCTCTGGCAGGG  49 268
CL52_RS07120 NONE
CL52_RS07125 NONE
CL52_RS07130 NONE
        lpxK NONE
CL52_RS07140 NONE
        kdsB 1557150 .. 1557195 +  -3.8  -3.05647   GAGCGAGTTCGCCGC CTGCTGGGGCATGCGCAGTG AAGATA CTCTTCGTCTGCCTCGGCAA TATCTGTCGTTCGCC  45 5
CL52_RS07150 NONE
        murB 1558676 .. 1558708 + -20.7  -3.53012   CGGTCTTGCCTGAAA      CGAAAAAGCCCCGGT GAT ACCGGGGCTCTTTCG      TTTCAGGGCACACAA 100 54
        rluC NONE
CL52_RS07170 NONE
CL52_RS07175 1565365 .. 1565378 +  -3.8  -3.85698   TTCGGGTGCGTGTCG               GCCA GAGCCA TGGC                TTTCTCGCGCGCCAG  57 444
CL52_RS20595 NONE
        rpmF NONE
        plsX 1567453 .. 1567472 +  -6.4  -3.33696   TCCAACTGAAATCGC            TGTGTCTG CATG CAGGCGCA             TTCATTCGGAACCAC  55 32
        fabD NONE
        fabG 1569220 .. 1569237 +  -7.7  -4.20516   CGCCACGCGGGATGC             GACAGTC TCAC GGCTGTC              TTTGTTCGCTAGCGA  72 47
        acpP 1569655 .. 1569682 + -14.2  -5.33405   CGAACGAAAGGAAAG        CCGCACTGCCTT GCAT GAGGTAGTGCGG         TTTTTCTTTGATGGG 100 56
        fabF NONE
        pabC NONE
        mltG NONE
         tmk NONE
CL52_RS07235 NONE
CL52_RS07240 1574948 .. 1574972 + -10.7  -3.69323   CGCCTGCCTTACAAT          CGCCGCTTTTC GTC GAACAGCGGTG          TTTCAATGCTCGTAG  76 57
CL52_RS07245 1575927 .. 1575952 +  -7.5  -3.08813   CAAGCCCCTGTCATT         TCTCCGCCGCCG CAC TGGCG-CGGCGA         TGTCTTCCCGTCACG  54 180
CL52_RS07250 1577437 .. 1577494 +   -13  -3.19212   GATGGCGCTCTGCCT CGCAT-CGG-C-CGCCGACA-GGATGGC CGATGC GCCATCCCTGTCGGAGAGTCCGCATGCG TGTCTTCTGGGTCCT  73 89
CL52_RS07255 NONE
CL52_RS21320 1578544 .. 1578591 +  -9.2  -2.70932   GAAAGCCCGCTGGGC TG-ACGGTCTCGCGCTGCACGGG CTTCC CCCG-GCAG-GCGCGACCGGGCA TGCTTGCCGCCCGCG  57 23
CL52_RS21325 1578998 .. 1579018 +  -6.8   -3.1978   GCGCGTCGTTGCGGC            TGCACAGC CAGAC GCTGCGCA            TGTTGCTGTCGCCCT  52 245
CL52_RS07265 NONE
CL52_RS07270 1580846 .. 1580863 +  -2.7  -3.40611   TGTTCGATAATCGAA             CGGTA TGACCGAT TACCG              TATTGTTCGCCTGCG  47 66
CL52_RS07275 NONE
CL52_RS07280 NONE
        pcaF NONE
        pcaD 1584642 .. 1584673 +  -3.7  -3.26874   GATCCTGGGCTTTCT     GC-GCGGCTGACGGA ACGG TCCGGTA-CCGCTGC      TTCGTAATAGTTTGT  48 16
CL52_RS07295 1585820 .. 1585843 + -14.6  -5.86332   GCTGCGTCCCCCCTG          GCCGGC-CACC GAT GGTGCGCCGGC          TTTTTTTTGCGTTGC 100 55
        benB NONE
        benC 1589031 .. 1589044 +  -5.9   -3.3785   TTCGCGAGCAGCCTC               GCTCC CACA GGGGC                TTGTGCATCGCTTCG  52 127
CL52_RS07315 NONE
CL52_RS07320 1591211 .. 1591232 +  -5.7  -2.74782   AGCGGTGACGGGCGC           GGCGCTGGC CGGC GCCAAGGCC            TGATTCGACCTTTCT  46 1
CL52_RS07325 NONE
        catC NONE
        catA 1593697 .. 1593746 +  -5.4  -2.87132   CCCGGCCGACGGCTT GCCCGCCGGCC-GCAACGCCCAC ATGAG GTGGGCGAGGCCGGACGACAGCC TCTGTCGCCGGCCCC  46 46
CL52_RS07340 NONE
CL52_RS07345 1596434 .. 1596452 +   -16  -5.24531   GGCGAAACGAAAAAA             CCCCGCCA GGT TGGCGGGG             TTTTTTGTGCCCGGT 100 52
        yegS 1611392 .. 1611406 +  -5.6  -2.59881   GCGTTAACCAAGGAG               TCCGCC ATG GCCGGA               ATTCTCGACTCAGTC  46 109
CL52_RS07410 1612343 .. 1612385 +  -4.1  -3.78022   TGACGCGGCCTGCGT TATGC-TGCGGCGCTTCC CTGCCGTT GGAGGCGTCGCATGCAGC TTTCCTCGATCTACC  56 38
CL52_RS07415 1613517 .. 1613527 +  -2.4  -3.91084   CAGCGGAATACCGAA                 GCGC CGC GCGG                 TTTCCTTGGCCGTGG  56 360
CL52_RS07425 1617250 .. 1617261 +  -7.2  -2.61264   GAGCTGGAAGAATGA                GGCG CGGT CGCC                 ATTCTCGATGGCAGA  51 26
CL52_RS07430 1618076 .. 1618099 + -17.4  -3.68738   GCCTGAGACGCCTGC          TGGCCCCGCG GATG CGCGGGGCCG           TTGCTTTATTCGGAC 100 35
CL52_RS07440 1619207 .. 1619225 +    -3  -2.75992   CGCTACGTGCGAACC             GAACCCAG GCT CTAGGTCC             TCGTCTTAGCTCACG  40 11
CL52_RS07445 NONE
CL52_RS07450 1620579 .. 1620596 +  -2.6  -3.61517   ACGGTCGTGCTACTT             GGCAAG AAAACG CATGCC              TTCTTCCAGCCCGCT  49 51
        cysK 1625499 .. 1625511 +  -2.6  -4.07568   CCGTTGGCCGGGTTC                GTCG TGTTC CGGC                TTTTCGGGCCGCCGA  57 66
        aceK 1627430 .. 1627462 +    -2  -3.53012   AACTTGGATTATGCT     CG-GTAAAAGC-CAGC ATG GCTGCGCTGTGACCCG     TTTCAAGCAGGAGGG  47 166
CL52_RS21615 1627589 .. 1627632 + -14.5  -3.05384   TGCCCAGCGCGCCGC CGCCCGGCCGCGTCGCCG CTGAGTTGC CGCCGCCGCGGCCGG-CG TTCACTGCCCGGGGA  78 4
CL52_RS07495 1629388 .. 1629403 +  -6.1  -3.51924   CTGCACGTCGCGGTG              GGCCA TGGCGC TGGCC               TTGTGTCAGTGGCGC  56 435
        recQ 1632367 .. 1632396 + -10.1  -2.76171   TGCAGCGGTGGGTGG       CCATTGGCGCTGAT TGC ATCA-CGCCATTGG       TAGTCTTGCCTGCGT  60 97
CL52_RS07515 1633003 .. 1633013 +  -4.6   -3.2614   CGTAGCCCAGAAAGA                 CGCT GCC GGCG                 TTGATATAACCGCTA  49 131
CL52_RS07525 NONE
CL52_RS07555 1640644 .. 1640659 +  -4.6  -3.27215   CATATCAACTGTCAG              GCGCTG ACGA TGGCGC               TTCCTCTGACCCTTT  50 19
CL52_RS07560 1641918 .. 1641934 +  -3.6  -3.71284   AGCGGACGATTTCCT              CGTCCA GATTG TGGCCG              TTGTATTGCTGCGAG  54 309
CL52_RS07570 NONE
CL52_RS07575 1644673 .. 1644699 +  -2.8   -4.1899   ATCCGGCTGTCGATG         CGCTGCCCTGGT GCA ACCAGACGGGCG         TTTTCCCTGAGCTGC  63 411
CL52_RS07605 NONE
CL52_RS07610 NONE
CL52_RS07615 NONE
CL52_RS07620 1651570 .. 1651581 +  -4.4  -3.53012   CCAGCCGAGGTAACC                GATC GTTG GATC                 TTTGCGAACCCAAGG  51 41
        scpB 1652405 .. 1652426 + -10.9   -3.7108   CTGCGTTCATGTGTT           CGCGGTCAGA ATA TCTG-CCGCG           TTTCCCTGTCGAACT  76 43
         edd NONE
CL52_RS07635 1655619 .. 1655636 +  -2.7  -3.71848   GCCGGCCCGGGGCGG             CGCGC-TA AGC TACGCGTG             TTGTTCATAACAAGA  52 72
CL52_RS07640 1656421 .. 1656476 +   -17  -2.50016   GGGAGCAGGCGAGCG CCGAGCCGAGCAGGCG-GCGCTGGCGGC TGCC GGTGCC-GCGCTCGC-TGCTCGGC-CGG ATGTTGCTGCTGACC  83 44
CL52_RS07645 NONE
CL52_RS07650 1659368 .. 1659378 +  -2.4  -3.06796   GACGACATTCACTTC                 ACCG GAG CGGC                 TTCCATGAGCTCAAC  41 133
CL52_RS07655 NONE
CL52_RS07660 NONE
        ugpC 1662282 .. 1662300 +  -2.3  -3.06831   GCCGCCCGCACAATG             TGGCGCT GTTCA AGAGCCG             TTGAGTGCGGGTTGG  41 3
CL52_RS07670 1663639 .. 1663672 + -20.4  -3.73402   CTGGTGGTAGCCGCA     CAGCCTGGCCTCCGC AGCCG GCGG-GGCCAGGCTG     TTTCCTGGCGAATCT 100 31
         zwf NONE
         pgl NONE
CL52_RS07685 1666699 .. 1666748 +  -7.7  -2.78463   GCCAGCGCACAGGCC CTCGCGGC-CCTGGCATGAGCAAG GGC CTCGTGCAGGCCGGGCGATGCGAG TATGATGCGCGCCCT  52 8
        rluB 1667911 .. 1667924 +  -9.5  -5.30155   CCCTAAATGAAAAAA               GCGCC TGCG GGCGC                TTTTTTCATTCCTGG 100 35
CL52_RS07720 1674858 .. 1674872 +  -2.8  -3.21912   ATCACCTCCTTAATC               GAAGAT CTC AGCTTC               TTCATAAGTTCCCAC  44 29
CL52_RS07725 NONE
CL52_RS07730 1675122 .. 1675153 +  -2.4   -4.1043   GTTAGAGTTTAGAAA      TGAGCATTT-TCAGC CTG GCTGATGAATGTTGA      TTTCTGGTCTTTACC  57 47
CL52_RS07735 NONE
         rrf 1678491 .. 1678526 + -23.4  -3.34398   GTCAAGCACCTATAC    CAAACCCCCGACCCGC ACTC GCTGGTCGGGGGTTTG     TCTTTGCGCAACGGG 100 34
        mtnA 1679819 .. 1679838 +  -5.6  -3.53012   CCGCTGACTGACGCA            CGCAAGGC CCTG GCTTCGCG             TTTGCGGCAGCCAGC  55 48
        gyrA 1682707 .. 1682742 +  -5.2  -2.68434   ACGAAGACTAAAGGC    GGGCCGGA-TGGCCCTG CTG CTGGGCCTCTCCGGACA    TGATGTGCTATCCCA  43 30
        serC NONE
        pheA 1684953 .. 1684969 +  -2.9  -3.90112   GAAGGTGCTGGGTTC              GTATCCC AAG GCGGTAC              TTTAATTAGCGGCGC  56 4
        hisC 1686158 .. 1686207 +    -7  -2.84687   CCTTCAGCAGGTGCT GGCTCGGTGAGTGGCGCTCGCGA AGCCA TGGCG-GCGCCGCTGGTCGGGCG TCTGGTCGTCGTTGG  50 16
CL52_RS07770 1688400 .. 1688419 +  -3.4  -3.31461   GGATGGAGGAGCCCT            CATGAGCC AGCA GGCTCCGG             TTATCACCATCGATG  46 21
         cmk 1689149 .. 1689182 +  -6.7  -5.72616   GCCTGTTTACAAGGA     GGCGTGCAGGAAT CCAGATCC AGTCCTGCAGGCC      TTTTTTTATATGAAT 100 87
        rpsA 1690972 .. 1690991 + -13.6  -5.28176   CTCCTGAATGAAAAA            GGGCGAAC TTCG GTTCGCCC             TTTTTTGTGCCTGAG 100 53
CL52_RS07790 1692711 .. 1692724 +  -2.3  -2.60075   CGCAAGCGGCGCGGG               CGGCT TAGA AGGCG                GTTGGTTCAAGGCAC  38 18
CL52_RS07795 1693390 .. 1693409 +   -10  -3.90112   TCGGACGATCAGGCA            CCGAG-CGG GTG CCGGCTCGG            TTTACTTGACCAGGC  76 62
        prmB 1697269 .. 1697291 +    -9  -2.71924   CCAGCAGGAAGCGCC           CCAGCCCGCG GTT CGCCGGCTCG           ATTTGCAGGCCGCTG  55 462
        aroC NONE
CL52_RS07840 NONE
CL52_RS07845 1701679 .. 1701694 +  -3.2  -2.60075   AGCTGAGGATGCGCG              CACTGC AGCA GCACTG               ATTCCTTCGCCAGGC  39 9
CL52_RS07850 1702281 .. 1702309 +  -2.2  -3.93695   TCTGGAGGACTGAGG        TGGCTGCCCGTG CACGT CACGGTCCGCAG        TTTCTCGATGATCGA  54 28
CL52_RS07855 1702597 .. 1702611 +  -5.6  -3.21747   TCGGCCCGACGCCCG               CAGCGA AAT TCGCCG               TTGATGCTCGACTCG  51 7
CL52_RS07860 1702926 .. 1702940 +  -5.6  -3.53012   TGCGGTGATAGGGCC               GCCCCA CAG TGGCGC               TTTCAACAGGCCAAG  54 142
        speE 1704711 .. 1704728 + -10.5  -2.85337   TGACCTGCTTGCGCG             CCCGTCG TACC CGGCGGG              TCATTGCTTCGCTAT  61 38
CL52_RS07875 1705508 .. 1705530 +  -9.9  -3.64703   GCGAAGGCGAGCGGG          GCGGCAAAGC ACTG GCTT-GCCGC           TTTCGCTGAAACGCC  70 329
CL52_RS07885 1707450 .. 1707474 +  -6.4  -3.17075   AGGCGATGCCGGTGC         CGGCGGCGAAG CGCG CTTC-CCGCGG          TTCCCTTCGGCCCAG  51 452
        pdxB 1710031 .. 1710068 + -12.1   -3.9392   ATAATGTCTAAGCCT   GAGGGTGAA-TTCCGCCC TCA GGGCAGAACTTCGTCCTC   TTGTTTGGCATAGAG  81 363
        ltrA 1712581 .. 1712598 +  -5.5  -4.28361   GCACCATTAATGTCG             GTTAGCC TCTT GGCTGGC              TTTTCGTAAACTTGA  71 47
        dnaX NONE
CL52_RS07910 1715065 .. 1715078 +  -2.3  -2.65774   ATGCAGTTGCCGCCT               GGCTT CAAA ATGCC                GTTCTGATCGCTGTA  38 5
        recR 1715874 .. 1715901 +  -4.2  -3.33492   AACTCAAGTAAATAG        CCATATCGAA TAAGTTGC TTCGATCTGG         TTATAACCTGCGTCA  48 136
CL52_RS07920 1716963 .. 1716982 +  -9.2  -5.63374   CTCCGGCGGCATATC            GAGCCCGG CAAG CCGGGCTG             TTTTTTTGATATTCG 100 70
CL52_RS07925 NONE
CL52_RS07930 NONE
CL52_RS07935 1719587 .. 1719599 +  -6.2  -3.05384   ACAGCAGATGCCAGC                GCCC GCGCA GGGC                TTCGGTGCGCCAGGG  49 447
        nadE 1723635 .. 1723684 +  -8.6  -3.14132   AGCCTTGAGGCAGCT CAGTGCCCCTGGTGGGACGCGGCG GCAC TGCCGTGCCCCATCAGC--CACTG TTGATGCGGCCCCGG  58 33
CL52_RS08025 1736730 .. 1736740 +  -6.8  -3.36327   CGGCGTGCCTGGCCT                 GCTG CTG CAGC                 TTCTCGATGAGCTGG  56 358
        rlmM 1742254 .. 1742275 +  -4.3  -2.94739   GGTGACCTCGGCCAA           GGCTTGCGT GACA ATGCGCGCC            TGATCTTTTGGAGTT  44 48
        tusA 1742556 .. 1742579 +  -4.4  -3.12351   GAGTCGACCGACGGC          TCACAGGCCG TCGT CGGGCTGGGG           TTGGCTGTGCCACAG  47 39
CL52_RS08070 1747860 .. 1747876 +  -2.1  -2.71712   CGTCATGCGTCGAGT              CCGTCCG GGT CAGAAGG              GTTTGGCCAGCACCA  39 71
        moaA NONE
         smc NONE
        zipA 1755161 .. 1755190 + -11.4  -3.53091   ACGCTGAGTAACTCC       CTCG-CACCGGGC CTAGC GCCCGGTGCCGCG       TTTGCCGGGCCGGCT  71 34
        ligA 1757899 .. 1757936 + -11.3  -2.72144   ACCCTCGCCGCCAAA   GCCGCTCCGGACTGTTTC GCT GAAGCTGTA-GGAGCGGC   CTTTGCCGCGAATGC  63 67
CL52_RS08105 1759818 .. 1759845 + -14.2  -3.34344   TAAGCCCAGGCGCAA        TGGATGGGGTGG CGCG CCACCCCATCGA         TTCATTGAGAGGTGA  82 38
CL52_RS08110 NONE
        fliD 1761769 .. 1761808 +   -24  -3.19026   AAATGACGGCTTCAA  CAGAAATAAAAAACCGCC TTCG GGCGGTTTTTTATTTCTG   TTCGATGTTCAAGTC 100 35
        fliS 1762289 .. 1762307 +   -16   -5.8187   TCGGGATTGCAAAAA             GCGCTGGC ATT GCCAGCGC             TTTTTTTGTTCGCTC 100 47
CL52_RS20605 NONE
CL52_RS08130 1763725 .. 1763747 + -17.8  -4.15044   CCCGTAGGAGAAAAA           GAAGGCTGCC CTA GGCAGCCTTC           TTTCTTAAACCAGCC 100 46
        sdhC NONE
        sdhD 1766118 .. 1766137 +  -2.8  -2.50935   TTCGTCTGGGGCGTA            CAGATTCT GTGG GGTATCTG             ATTCATGGCTAACAT  39 5
        sdhA NONE
CL52_RS08155 1768687 .. 1768712 + -17.6  -4.26076   CGTTACCCGTAGTAC         CCACGGCGCC AGCTTA GGCGCCGTGG          TTTTAGTAGGGATCC 100 83
CL52_RS08160 NONE
        odhB 1773039 .. 1773096 + -10.6  -4.55128   ACATCTGACAAGGCA GCCACGGGCGGTGGGCGGTCAGCTGG TGATATAC CCGGC--ACCGCTTGCGGCTCGTGGC TTTTCGTTTGCCGCT  95 33
        lpdA 1774587 .. 1774613 + -16.6  -4.90778   TCGCGTGGTACAAAA         GCCCGGCCTGTT CTG AACACGCCGGGC         TTTTCTTTGACTAAA 100 46
        sucC NONE
        sucD 1776814 .. 1776833 +   -15  -4.15066   ACCAGCGCCGTGACA            GGGCCACC TTCG GGTGGCCC             TTTCGTTTGTGGGTA 100 40
        brnQ NONE
CL52_RS08190 1779185 .. 1779206 +    -5  -2.54896   GTAGGGCGCAACCTT           GCCGCCCG GTATCA TGGCCGGC            TCGATTCCATCGCCG  43 37
CL52_RS08195 NONE
CL52_RS08200 1780180 .. 1780196 +  -2.9  -3.21064   CTGACACTGCTTCAA              GGATCCG GAA TGGATGC              TCTGTTGATTCTCGC  44 73
CL52_RS08205 NONE
        htpG 1783474 .. 1783493 + -16.4  -4.61873   CGCGCCGCTAGGAGA            GGCCCGGC AATC GCCGGGCC             TTTTCGTTTCTGCGA 100 48
CL52_RS08220 1785289 .. 1785322 +  -2.4  -2.69601   ATGCCCGTGTCATAG     GCTCAGCTTCCCTA CAGCAC TAAGGAAGCTGACA      TGCGTTTGATATCCG  39 42
CL52_RS08225 1785794 .. 1785822 +  -3.7  -3.95071   TACAGTGAGGTCTGG        CTGGCCGAACC ATTCATC GGTCCGGCAGG        TTGTTTGGCAGTTTA  58 33
CL52_RS08230 1787662 .. 1787675 +  -3.7  -3.64822   TCTGGCGATAGCCAT               GGCAG GACG CAGCC                TTTACCTCAGGGGGT  53 132
CL52_RS08235 1789337 .. 1789356 + -16.4  -5.38054   TCGTGCTGATTCAAA            GGCCCCGC TCTG GCGGGGCC             TTTTTGTTTCTGCAG 100 41
        sstT 1790828 .. 1790845 + -14.1  -4.11623   CTGAACCAAAAAAAA             CGGCGCC CGTG GGCGCCG              TTTCCTTTACTCGTA  93 118
CL52_RS08255 NONE
CL52_RS08260 1794360 .. 1794381 +  -3.5  -3.08679   GCCGCCGCGCCAAGA           GCCGGCGCC ATGA GGCTGTGGC            TGTTGCGTCACGGGG  43 13
        sixA NONE
CL52_RS08270 1795333 .. 1795356 + -12.4  -3.61178   GAGCGGCGCCGTGGC          CAGCGGGTCG GTGA TGGCCCGCTG           TTTGGCATGAATGAC  75 39
CL52_RS08275 NONE
CL52_RS08280 NONE
CL52_RS08285 1798197 .. 1798210 +  -3.7  -3.90588   GGTGCAATAGACGCT               CGCCG GCCG CTGCG                TTTGCTTGAGCCGTG  58 53
CL52_RS08290 1799341 .. 1799354 +  -9.5  -3.39449   CCCCTAGGGCCCCGG               GGCGC TCAG GCGCC                TTCCTGTTCGTAGGC  63 34
        selD NONE
        mnmH NONE
CL52_RS08310 1802956 .. 1802995 +  -6.2  -3.96327   CGGCTTGGCGACGGT  TCCGGCCCTCGCCAAGCGC CCG GCGCTCGG-GTGAGACGGG  TTTGTCATCAGAGGT  62 55
CL52_RS08315 NONE
CL52_RS08320 1804962 .. 1804990 +  -2.4  -3.33815   CTGTATGCGTCGAAA       C-CGG-AGTCGGCA GTA TGACGGCTGCCGCG       TTGATTCCGCGCAAT  45 8
CL52_RS08325 1807024 .. 1807053 + -14.3  -2.66964   TGATCATTTCGGGCC       CGCTGCAGCCGGCC ACC GGCTGGCTG-GGCG       TCCTATAGTGCGTCA  74 76
CL52_RS08330 1807932 .. 1807977 +  -8.1  -2.78935   GCCCGGCTGAGCTCG CCGGAGAGCGCGGCCAGTTCCG CGC TGGTGCTGGCCGA-CGCTACGG TCTGCTGCACCGTCT  51 69
CL52_RS08345 1811865 .. 1811907 +  -9.6  -2.78715   GTTCAGCCCTCGCGC GCGGCCGCCAGTCGCTCGGC GGC GTCGAGCCGCAGGCGCTCGG TCTCGTCGAAGCGTT  57 44
CL52_RS08375 1818531 .. 1818551 +  -8.9  -2.62396   ACCGCGCTAGCGCTT            GCTTTGCGG CCT CCGCACGGC            TACTGTCGCGCCCTC  53 56
CL52_RS08380 NONE
CL52_RS08385 1819965 .. 1819982 + -12.7  -5.27477   TTCAGGCATAAAAAA             GCCGACC CTGG GGTCGGC              TTTTTTGCTTCAGCT 100 98
CL52_RS08395 1820924 .. 1820941 + -14.1  -3.45849   GCGCAGAATGAAGAA             CGCCGGG CTAG CCCGGCG              TTCTGGTCGTATCAG  79 30
CL52_RS08405 1823343 .. 1823356 +  -8.1  -2.67244   TGGTTATAAGCATGG               CCGCT AGGT AGCGG                TGCCTTTGCCTCTGA  53 125
        cysB 1824635 .. 1824664 + -13.5  -2.78463   CGCCGTCGACCTCGA       GTACCGGCACCTG GCTG CGGGTGCCGGGGC        TCTGGTCGCGGCGCT  67 305
        thrH 1825923 .. 1825941 + -13.1  -4.55798   AGAGAGCGGCAGGAA             CGGCGCC CAGGT GGCGCCG             TTTTCGTTTGCCGTC 100 46
CL52_RS08445 NONE
        prpB NONE
        prpC 1833490 .. 1833520 + -18.3  -3.61178   CTCAGCGTTGATAAG       TCGCAGGAGCGCC TTTGC GGCGCTCCTGCGC       TTTACCGTCAATCCC 100 30
        acnD 1836177 .. 1836213 + -25.9  -3.11178   CAGGCCTGAGCCCGA    TCGACGCTCCGCCCGCC TGA GGCAGGCGGAGCGTCGG    TATTCGCATTCCTTG 100 32
        prpF 1837488 .. 1837504 +  -9.4  -5.24796   GTCAGACAACAAAAA              GTCCGC ACGAA GCGGAC              TTTTTGTTGTCTAGC 100 54
        ppsA 1840886 .. 1840906 +   -14  -5.36441   CTGAGCGTGATCCAA            CAGGGCGG TTTTT CCGCCCTG            TTTTTTATCTGGGCG 100 37
        rraA 1841509 .. 1841525 + -15.1  -5.03994   CAGTTCATGATATCG              GCCCGGC TTC GCCGGGC              TTTTTGTATCTAGGG 100 49
CL52_RS08485 NONE
CL52_RS08490 NONE
CL52_RS08495 1843667 .. 1843679 +    -2  -2.91429   CAGTCGCTGACACGG                TTCT CTGGT AGAA                TATGTCGCCATTTTC  40 31
        sigX NONE
CL52_RS08505 1845472 .. 1845495 +   -11  -4.39166   AGCAGCCCAGAACAA          TGCCCGCATC CTCG GATACGGGCA           TTTTCGTATCTGCAA  95 78
CL52_RS08515 1849571 .. 1849607 +  -2.1  -4.07568   TGCAGCGTGCGGTGC    TCTTCGTCGGAGTTGCC GAC GTCCACTGCTGCGAGGA    TTTTGCCGCCGCGCC  58 465
CL52_RS08525 1851011 .. 1851038 +  -6.2  -3.93556   ACATCGACGATTTCC        GCTGCCTTCAGG CGGG TCTGAGCGCGGC         TTTCGTTGCGTAACT  64 247
CL52_RS08540 NONE
        cysS 1855236 .. 1855267 + -18.2  -3.60296   TAGTTCGAGCTCGAA      TGAAAAACGGCACC ACCA GGTGCCGTTTTTCG       TTTCCGCTGCAACTC 100 38
CL52_RS08555 1856467 .. 1856480 +  -2.3  -3.88498   CGCAGGTTCGAGTCC               TGCCG GGTG CGCCA                TTTGGTGTCTGGCAC  54 12
CL52_RS08560 1856598 .. 1856617 +   -15  -4.70319   CCCATATTCCAGAAG            CGCCAGGC AATA GCCTGGCG             TTTTCGTTTTAGTCC 100 37
CL52_RS08565 1856772 .. 1856787 +  -7.5  -5.30686   CGGGAATCTCCGAAA              GCCCC GTCATA GGGGC               TTTTTTGTGCCTCTT 100 72
CL52_RS08610 NONE
CL52_RS08615 1871852 .. 1871871 + -10.6  -3.01924   GGCGGGTGAACCATT            CCAGCGGC GCCC GCCGCAGG             TGTTCACGCAGCGTG  62 377
        bktB NONE
        fadB NONE
CL52_RS08635 1877778 .. 1877791 +  -3.8  -4.36914   CCACAGCACCATGGC               GCTC GTCGAA GAGC                TTTTCTGAACAGACC  66 4
CL52_RS08640 NONE
CL52_RS08645 1879630 .. 1879681 +  -4.5  -3.59979   CGACGAACGGCTAAA GCCGA--GGCGGATCGGT-GCTGT CCATGAA ACAGCTGCCGCTCCGCCAATCGGG TTTGCGCTCGCCAGG  53 78
CL52_RS08650 1881026 .. 1881045 +  -7.8  -3.36273   ATCTGGGCAAGCAGT            C-CGCGGCC AAG GGCCGTGAG            TTCGTATTCGACCCG  59 244
CL52_RS08665 1883547 .. 1883564 +  -4.1  -3.18264   AGCGGCTGATCGCCG             TGGGC AGGACAGG GCCCA              TTCGTCGATACACAG  47 32
CL52_RS08670 1883958 .. 1884000 +  -3.9  -2.91264   GGGCCCGGTCGGCCG CCCGGCGACGGCTCG-GGGC TGTG GCCTGCTGGCTGCCGTCGAG TCTGTGGGTAACCGG  44 67
CL52_RS08675 1884915 .. 1884956 +  -4.3  -3.75629   TGGGTGTGCCTTGTC CTTCAGGTCGGCGGTGTCG CTGC CGACGTCATCGATCTTCAG  TTTCGCTTCGCCCTC  55 352
CL52_RS08685 NONE
CL52_RS08690 NONE
CL52_RS08695 NONE
CL52_RS08700 1891371 .. 1891391 +  -4.7  -3.38046   TCAGAGTCGCGGCTG           CAC-GCCG ATAGCC CGGCTGTG            TCTTTGCCATCAGGG  50 80
CL52_RS08705 1893565 .. 1893591 + -11.6  -3.64703   GGTGTAGCGTTCGGG        TGCGCCG-GCC GCGCGG GGCACGGCGCA         TTTCCCTGGCACGGG  75 34
CL52_RS08710 NONE
CL52_RS08745 NONE
CL52_RS21230 1903345 .. 1903361 + -10.8  -3.42996   CCCGGCAAAGAAAAA              CCCCGC ACGGG GCGGGG              TTCTCCTGGGTGCTG  71 169
CL52_RS08785 1913291 .. 1913342 +  -5.1   -4.3739   ATCTCGTACAGCGAA TCGCCGCTGCGCACCTTGTAGTAGG TCGG CTTGCT-CTTGGTGC-CAGCCGCGG TTTTCTCCAGGAATA  72 154
CL52_RS08800 NONE
        rnhA NONE
        dnaQ 1917728 .. 1917739 +  -2.2  -3.54662   CTTCGAACAGGCGGC                TGTC GCAT GGCA                 TTGTGCTATCTTTGC  49 52
        uvrY NONE
        uvrC NONE
        pgsA 1921167 .. 1921178 +  -2.2  -3.53444   TTTCTTTAATCAAGG                GCTT GACG AGGC                 TTTGCGGAGCGCTAA  47 43
CL52_RS08830 1921302 .. 1921326 + -14.3  -2.74605   CGCTCCAGTTTAAGG          CGCGCCGCA GTTCAGA TGCGGCGCG          TGCGTTTTGAGGCCG  75 34
CL52_RS08835 1921420 .. 1921444 + -15.8  -5.72622   CCTCCATATCAAGAG          CCCCGCAGAT GATGA ATCTGCGGGG          TTTTTTGTTTCTGGC 100 34
CL52_RS08845 1922340 .. 1922356 +    -8  -2.70932   TCCCCGAGGACGAAC              GGCTTC CCTGC GAAGCC              TGATTGCGGCGGGCG  52 6
CL52_RS08850 1923935 .. 1923945 +  -6.8  -2.82635   CCGCCGGCCGAGCAG                 CCGA GCG TCGG                 TATAGTCGTCCGGGT  50 258
CL52_RS08865 1925171 .. 1925187 +  -7.2  -4.16943   TGAGTGCCTTGTGCT              CGGCGC GTCGA GCGTCG              TTTTGACCTATGCGC  72 71
        galU 1933836 .. 1933855 + -12.8   -5.0925   TTCTTGATCGATAAA            GGGCTGCC GGCA GGCGGCCC             TTTTTCATTTTCCGA 100 54
        gorA 1935713 .. 1935746 + -18.2  -3.38316   CTGAGGCGAGCAGGT     GCGAGGCGGGCCGCT GCCGG GGCGGCCCG-CTCGC     TTCCTTCAGTGATGG  93 37
CL52_RS08910 NONE
        treS NONE
        glgB 1944476 .. 1944492 +  -7.9  -3.31144   GGGCGATCCACGGGC              CGCGGTG CAG CAGCGCG              TTATGCAGCTGCACC  56 72
CL52_RS08950 1950639 .. 1950660 + -10.1  -6.34424   CCGGCAGCTTTATTG           CAACGCGGC TTCG GCCGCGTTC            TTTTTTTTTTCAGCA 100 130
CL52_RS08955 1951891 .. 1951905 +  -7.1  -2.52896   CGATAGCTGTTCCGC               CAGCG ACAGG CGCTG               TGACTTCAGCACTAC  48 43
        pqqA 1952101 .. 1952128 + -10.4  -5.00616   GCCAATCGTTGATTG        GCTGCGCCCCGG TCAG CCGGGGCTTTGC         TTTTTTGGAGGGGAG 100 26
        pqqB NONE
        pqqC NONE
        pqqD NONE
        pqqE NONE
CL52_RS08980 1957232 .. 1957253 +    -3  -3.61715   ATTGCATTAACCCCT           CAATGCAG TAGGCT TTGCGTTG            TTGTTACAAAAAATA  51 59
CL52_RS08985 NONE
CL52_RS08990 1960094 .. 1960151 +  -7.6  -4.13767   GCACCTGCTGGGTGA GGGTA-AGGCAGGCGGCTGACCCGCCAG GCTT CGGGCTGG-CGGTCGTCTGCCCCTACCG TTTTGGCGTGGGCGC  72 7
CL52_RS08995 1962546 .. 1962564 +  -4.4   -3.8917   CGTCCGCATCCACAT             TCACCCCC GCA GGCGGTGC             TTGTTATAGTTGCGC  58 119
CL52_RS09000 NONE
CL52_RS09005 1965151 .. 1965183 +   -12  -3.18582   GCTCGGCATGCCGGT     GGCGGCCTGATGAGC CTGC GCTGG-CAGGCCGCC      TTGCTGGATCCGCTG  70 16
        nudC 1966305 .. 1966327 +  -3.2  -3.12351   AGAAGCCAAGCCCGA           GCCCCTGTGG CCA CTGCCGGCGC           TTGCCTATCCGGGCG  44 334
CL52_RS09020 1967836 .. 1967847 +  -2.2  -3.67588   CTCCGCGACACGGCG                CAGG GGGA TCTG                 TTTGAGTGCCATTTC  51 235
CL52_RS09075 NONE
CL52_RS09080 1978913 .. 1978940 +  -3.5  -2.87132   CGATCGGCGGTCGGC        TCGGTCTGCA GCTACGACG TGC-GACCGA        TGTATCGCCGACCGG  42 78
CL52_RS09085 1980281 .. 1980318 +  -2.6  -3.90112   GCTTTCAAATGGCTC  GCCGGCTTCGGCTGCCGC CTCG GCG-CGGTCGA-GCAGGG   TTTCGTTGAGCGAGA  56 221
CL52_RS09100 NONE
        nfuA 1987652 .. 1987665 +  -8.1  -3.02144   CAGTGTGCCGTTGCC               CCTGG TCAT CCAGG                TATTGAAACAGGTGC  53 450
CL52_RS09135 1993215 .. 1993235 + -11.8    -4.946   TTTCGTGTAGCAGAA            GCCCTGCC GGATA GGCGGGGC            TTTTTCATGTTTCGT 100 57
         tig 1994803 .. 1994829 + -15.3  -3.35597   TCTCGAGTGCACAAA         CATAAGCCAGC CTCGT GCTGGCTTATG         TGTTTGAGGCATGAC  84 53
        clpP 1995511 .. 1995529 +   -16  -3.19246   CGGTCTGATCTGCAT             GGCCGTCG GTT CGACGGCC             TTCCCTTGGGCTTGA  86 33
        clpX 1996877 .. 1996922 + -12.5  -4.40692   CAAGGCTGCGCCTGA GGCGTAAAGAGCGAAGGGGCC CTCG GGCCCCTTTGCATTTATTGCC TTCTTGTTTTTTAAC 100 19
         lon 1999451 .. 1999461 +  -4.6  -2.79133   TGCCCCATTCATGAG                 CCGG CCC CTGG                 TGTCATAAGCCATTC  44 68
        hupB 1999921 .. 1999951 + -14.9  -4.15657   TCCGCTCCAAAGCTC      CGAGAAGGCGCATC CCAG GATGCGCCTT-TCG       TTTATCTGGTTATCA 100 133
CL52_RS09165 2001919 .. 2001962 + -18.8  -3.27704   CGGAGATGGCTCCGG CGGGGGAGTGGGCGTCTGGC ATAA GCCAGGCAAACACTCCCCCG TTGCGTTTCGGCCGT  93 80
CL52_RS21440 NONE
CL52_RS09190 NONE
        tolQ NONE
        tolR NONE
CL52_RS09205 NONE
CL52_RS09210 2015804 .. 2015826 +    -9  -4.74103   GCGCCAGCACGTCGA           ACGCCTCGCC ATT GGCCAGGCGC           TTTTTCAGTTGCGCG  91 251
CL52_RS09220 NONE
CL52_RS09225 NONE
CL52_RS09230 NONE
CL52_RS09235 2020927 .. 2020941 +  -5.6  -3.17075   ATCAGGTAATGCTGC               GAGCGC AGG GCGATC               TTGCGTTGCAGGCCC  49 291
CL52_RS09245 2022993 .. 2023008 + -11.8  -4.65895   GCCGGTTGAGGAAAA              GGCCGC ACTA GCGGCC               TTTTTCGATCGGGCA 100 49
CL52_RS09260 2026276 .. 2026309 +  -4.5  -3.37487   AGAGCCGTGCTAGCA     TGCCGCGCCATGCTTA AGC TGACCCT-GCGCGGCG     TATTTGCCGGTCTGA  48 163
CL52_RS09265 2028013 .. 2028036 +  -3.7  -2.78495   CCCGAGCTTTGAAGC          GCGCGGCCA AGTGGG TGGCGGCGG           TCCTGTTGGTGCTGG  42 29
CL52_RS09270 2031828 .. 2031838 +  -8.2  -2.88544   GCGGTGGTAGCATCC                 GGCG ACA CGCC                 TGTGTGGAGATCCCG  55 170
CL52_RS09275 NONE
         tpx 2033991 .. 2034017 + -14.5  -4.56597   GGCGATGCAAACCAG        CG-AACGGCGCC TCTT GGCGCCGTTTCG         TTTTTGACGACGAGA 100 47
CL52_RS09285 2035511 .. 2035541 + -24.2  -3.01712   GCATGGCGTGACAAG       GCAAAAGCCCCGGT TCG ACCGGGGCTTTTGC       TATTCAGCGCCAACG 100 70
CL52_RS09295 2038894 .. 2038910 + -10.8  -5.26875   TAGCAAGTGAAGAAA              GCCGGC CTCGA GCCGGC              TTTTTTCATTCAGCG 100 46
CL52_RS09330 2046333 .. 2046346 +  -2.3  -3.21934   TGTTGTCGGCCTATC               GGTTC GGCT GACCC                CTTTTCTGAAACGGA  43 15
CL52_RS09335 NONE
CL52_RS09340 2047319 .. 2047334 +  -6.8  -3.03159   AAGTGCAGGTGCGGC              CCGGTGC TGC GC-CCGG              TGTTGCCCGACTTGC  51 149
CL52_RS09380 2060013 .. 2060039 +  -3.6  -3.13109   CGAGGAGTCCGGTGA         GCTGACCAGC ACGCGCA GCTGGATGGC         CTTTTCGCTGGTGTC  45 223
CL52_RS09390 2061703 .. 2061755 +  -6.2  -3.14132   ACCGCAGCCGAGGCC GGCCCACTGTGAACGCCGCCGCCCC CGGGCA GGGGCGGCGG-G--CGTGGCGGACC TTCATGAAACAACGA  51 61
CL52_RS09395 2062049 .. 2062067 +  -5.8  -3.06183   ACGCTCAGTCGAGCG             CCGCGGGC TCG GCCGGCAG             TTCGCTGCGCGTGGC  49 40
CL52_RS09405 NONE
        ligD NONE
CL52_RS09415 2067041 .. 2067066 + -11.1  -2.78816   CGATTCATGGAACGG         GGCAGCGTGACG GTA CGGC-CGCTGCC         TGTCATGCCGGATAG  63 413
CL52_RS09450 NONE
CL52_RS09455 2074871 .. 2074889 +  -2.3  -3.34344   ATGAACCCAACGGCT            GCC-CCGG CTGG CCGAAGGC             TTCGTTCGCGCCTCA  45 54
CL52_RS09460 2076129 .. 2076144 +  -6.8  -3.53012   TCGATGGCGATCGTC              TCCGCC GTGC GGTGGA               TTTCACGGCACGGCC  57 48
CL52_RS09465 2077932 .. 2077952 + -15.4  -3.68359   ATACTCCCCCCACTA            GGCCCGCG AACAC CGCGGGCC            TTCTGCTTTTCAGCA  90 40
CL52_RS09470 2079181 .. 2079198 +  -4.1  -3.44146   ACAGTGCAGGTAGCG             CA-CGCCG CTA CGGTGCTG             TTCGTTGTGCACCAC  49 381
CL52_RS09520 2089855 .. 2089868 +  -2.3  -4.26903   GCGATTCGGTGAAAA               GGACC TGGC GGTCG                TTTTCCTCCCCTACC  62 165
CL52_RS09525 NONE
CL52_RS09530 NONE
CL52_RS09535 2095949 .. 2095959 +  -2.4  -3.82083   CCCTTCCGGTTGGTG                 GCCC TGG GCGC                 TTTCGGTTGTCATCC  52 76
CL52_RS09540 2097264 .. 2097283 +  -2.8  -4.18018   CGCTGAGGAAGTCGA            CCA-TTCCG GCG CGGTACTGG            TTTTCGATCAGGCGC  63 230
CL52_RS09565 2107717 .. 2107731 +  -5.6  -3.46285   CTACTGGTCGACGCG               GCTCAG CGC CTGCGC               TTCGTATTTCGGATA  55 42
        exaA 2113049 .. 2113102 + -16.8  -3.61103   TACCCGGCCGGCGAA CATCGCC-CGCCCTTCGGTCCCGAGT TGGC GCTCTCG-CCGAAGGGCGAGGCGGTG TTTCGCATGGCCTTC  91 81
CL52_RS09600 NONE
CL52_RS09605 NONE
CL52_RS09610 2115107 .. 2115124 +    -4  -3.07816   GCCGAATTACACAGT             GGGCGG TAGGTC CCTCCC              TTCACTGGATGCCAA  45 113
CL52_RS09615 2116792 .. 2116812 +  -3.9   -3.8917   CCGCTGCCTTCGAAT            TCGTCGTTG GGC CGGTGACGG            TTGTTCTCGTTGCCG  57 348
CL52_RS09645 2125496 .. 2125526 +  -6.9  -3.09492   GGTGGGCTTGTGAGA      GGCCCTGCCCAGC TTGCCGC GCTG-GC-GGGCC      TGTTCGCGTTCCAAG  51 28
CL52_RS09650 NONE
CL52_RS09655 NONE
CL52_RS09660 NONE
CL52_RS09665 2128648 .. 2128658 +  -2.4   -3.9093   AACGTAGGATTTGCA                 CGGG GCG CCCA                 TTGTTCTGTAATCGC  54 71
CL52_RS09670 2129362 .. 2129376 +  -6.4  -3.53012   GAGGCGATCCACAAC               GTCATC CGC GATGGC               TTTCCCGACAGCGAA  57 116
        folE NONE
        folX NONE
CL52_RS09720 NONE
CL52_RS09725 NONE
CL52_RS09730 NONE
CL52_RS09735 2143455 .. 2143476 +    -5    -2.867   GACAGGGCCTATTTT           CCGCTGGC TATACC GCCGCCGG            TATGCTGCTATTAAT  46 66
CL52_RS09740 2145832 .. 2145849 +  -6.9  -2.71364   ACCTCGCCCTCGGCA             CGCTGGC AGCA GTCGGCG              TCCTTGAGGCAATGG  48 460
CL52_RS09755 NONE
CL52_RS09760 NONE
CL52_RS09765 NONE
        phrB NONE
CL52_RS09775 NONE
CL52_RS09780 NONE
CL52_RS09785 NONE
CL52_RS09790 NONE
CL52_RS09795 NONE
CL52_RS09800 2157535 .. 2157566 + -25.2  -5.45802   CGAATACCAGGCAAA      GGCGCCTGGGGCCG GCAG CGGCTCCAGGCGCC       TTTTTGTTTTGCGGA 100 348
        nirB NONE
        nirD NONE
CL52_RS09815 2161403 .. 2161413 +  -2.4  -2.78712   CCCACGTGCGCACCG                 CCGC CAA GCGC                 TCGTTCGGTTGAGCA  39 3
CL52_RS09820 2163318 .. 2163329 +  -2.2  -2.66316   TTTGCAGTCGTCAGA                CTGA CGAA TCGG                 TCGTCTCATCGCGGC  38 144
CL52_RS09825 2163711 .. 2163734 + -11.7  -4.07885   AGTGAGGTCTTGCTG          GGGGGGCAG GCTCCG CTGCCCTCC           TTTTCCAACCGCATC  83 36
CL52_RS09830 2165186 .. 2165209 +  -5.3  -5.86965   CGGCGGTCATCGGTC          GCAGCCT TTAGTCGACT AGGCTGC           TTTTTTTTGCTCGGT 100 42
CL52_RS09835 2166488 .. 2166527 + -13.6  -3.63895   TCACCAGCTTCACCC  CGTAGTCGC-CCGGCTG CATCGAA CGGCCGGCGCGGCTGCG  TTTGGCCTGCTTGAG  79 488
CL52_RS09865 2173463 .. 2173485 +  -6.1  -3.54109   TCTAGCGGTACAAAC           GCCGCGCCG CCGAA CGGCTAGGC           TTGTCGTTAGATTCA  57 97
CL52_RS09870 NONE
CL52_RS09875 2177474 .. 2177508 +  -8.4  -2.71364   AGGCGTCGGCGGCCT     GGCCGAGCAGACGCGC CTG GTGCGTCTGCGCCATC     TCCTTGAGGAAGTCC  52 39
CL52_RS09885 NONE
CL52_RS09890 2180941 .. 2180955 +    -7  -2.65354   GGGATTTCAACGCCG               CAGCGC CTG GCGCGG               TAACTTTCGGATGGG  48 142
        mmsB NONE
CL52_RS09900 NONE
CL52_RS09905 2184630 .. 2184640 +  -2.4  -3.48276   CGTTCCGGTCCAGCC                 GACG ACG CGAC                 TTCTGTGCCCCAGGC  47 467
CL52_RS09915 2186971 .. 2186981 +  -2.4  -4.56775   CGTAGGGTGGAAAGC                 GACC ACG GGGC                 TTTTTCCACGCGCGT  68 276
CL52_RS09955 NONE
CL52_RS10030 2206930 .. 2206947 + -14.1  -5.42259   ATCTGCATAGCAAAA             GCCCCGG TTCT CCGGGGC              TTTTTTTCGGGCTAC 100 40
        trxB NONE
         aat NONE
CL52_RS10075 2217350 .. 2217369 +  -7.1  -3.43071   AATACTTGCCGTTTT            TGCCGAC GTATCA GTCGGCG             TTCATTGATATCGAG  57 71
        infA 2217631 .. 2217650 +  -9.2  -5.45802   CGAGCGCGAGAAAAA            CGCCCGGT TCAA ACCGGGCA             TTTTTGTTTTGGGGC 100 42
CL52_RS10105 2224810 .. 2224836 + -19.5  -5.60993   CGTAACGCAGCTGAA         GAAGCCCCGGC CTCGC GCCGGGGCTTC         TTTTTTTGTACGAAC 100 54
CL52_RS10110 2225319 .. 2225341 +  -7.6   -3.8766   CGCTCCACGATCTGG           CGGTCGTGCG TGA CTGACGACCG           TTTCGTGTCATCTCC  68 9
        mnmA 2226522 .. 2226551 +  -4.2  -3.15544   AGCCTGGTTCGAGGG       C-GCTCGCCCATG ACACG CCTGGACGAGCAG       TTGATCGCACTCGGG  47 13
        hflD 2227172 .. 2227190 + -10.2  -3.90358   CGCCAACGCACGCGA             GCGCCGGC CCG GTTGGCGC             TTTCGTGTATAATCT  76 46
        purB 2228633 .. 2228651 + -17.4  -5.27335   GATCTACTTTACGGA             CGCCCGGC TGC GCCGGGCG             TTTTTATTTGCAGCC 100 43
CL52_RS10130 NONE
CL52_RS10135 2230307 .. 2230342 + -11.1  -3.53091   GCAGGCCTGGTCAAG    CGGCTTCGGTGGCCG AGCTGC CGGCCGTCGAATTCG     TTTCGCCAGGCCGCT  71 47
CL52_RS21060 NONE
CL52_RS10140 2231865 .. 2231875 +  -2.4  -3.07935   CGTGCTCAAGCCAAC                 CAGC CGA GCCG                 TTCCGTGACTGCACT  41 179
CL52_RS10145 2233815 .. 2233855 + -22.2  -3.08679   TGCAAGGGGGTGAGC GAC-AAAAGAAACCCCGGC GACT GCCGGGGTTTCTTTTTGTC  TGTTGCCTAGGAAGG 100 55
        queD 2237026 .. 2237053 + -18.4  -3.85092   TTGCGCAAAGACAAA        CCCCCGACCAGC GAAT GCGGGTCGGGGG         TTTGGTATAGGTGCT 100 224
CL52_RS10265 2267665 .. 2267678 +  -4.5  -4.30576   GACGGTGGTTCTTTG               CGTAC CGCG GTGCG                TTTTGGTACTCCACA  66 109
CL52_RS10300 2278880 .. 2278903 + -12.4  -3.05596   GATGGTGAAATAAGC          CCCTGGGGCT ACTT AGCCCCAGGC           TTCGGTGCAAGCGTA  68 399
CL52_RS10335 2283584 .. 2283595 +  -2.2  -2.60725   AGGCTGTGTAAAAAC                GTTG GCAT CGAC                 CTTGCTGTGATTTGA  38 79
CL52_RS21620 2284094 .. 2284146 +  -9.6  -3.03619   ACAGCTGCCGACGTC GCCCGCGCGGTGCAGGGCGCACAG CGCGC CTTCGTGACCTGGACCGCTCGGAC TCTTCCGACCTCGTT  60 83
CL52_RS10345 2285345 .. 2285384 + -16.4  -3.72576   TACAAATCCTAAACG  CTCAGAGCCACGCCCC ATAACTCA GGGGCGTGGCTCAGCG   TTTGCTGACCGAGGA  93 29
CL52_RS20680 NONE
CL52_RS10365 2287306 .. 2287330 +    -7  -4.13767   TGGGTGCAAAGCGGT          GGGCCGCCGG ACAAG CCGGTGATCC          TTTTCGACTACACAG  69 496
CL52_RS10410 2298604 .. 2298624 +  -8.3  -3.65351   TGGCTAGCCATCCTT            GTCCTCC CACACGT GGAGGAC            TTTCCATGAACATCA  65 291
CL52_RS10415 2299394 .. 2299416 +  -3.4  -2.84684   CAGCCACTGTGCAAC           TCGACAATAA AGT TTTTAGTCGA           CATTTTTATTTAAAA  42 169
CL52_RS20690 2300780 .. 2300837 +  -4.2  -2.71791   GGCGAATAGGCGAAC G-CTGCTAT-TGGCCGGTAGCTGC CTATCGTCACCC GCTGCAACCGGCCACAAAGCAGAC GTTTCAAGGGCAGAT  42 32
CL52_RS10430 2304866 .. 2304877 +  -3.6  -3.28181   GTATCAAAAATTAAA                CGGT GTTC GCCG                 TATTGGTTGACTTTC  46 4
        dusA NONE
         tal 2308430 .. 2308446 + -12.3  -2.57132   TGCGTCGTCACCAAC              GTCGGCA GCA TGCCGAC              CTTCTGCCGGGAAAG  64 267
CL52_RS10455 2310684 .. 2310697 +  -2.3  -3.78934   CGCCCAGCGTCTGGC               CGAAG TCCT CGTCG                TTCTTCTGCAGCCCC  54 352
CL52_RS10465 2311582 .. 2311602 +  -7.6  -2.54371   TCGCCTCGTCCGGCA            GGAAAGGT TGATC GCCTTTCC            TGCATTGAGGTCATT  51 52
CL52_RS10485 NONE
CL52_RS10490 2317491 .. 2317524 +  -4.6  -3.53811   TAGGCGCCCCCCAAC    CTTCGT-GC-TACCGC CGGG GCGGAATGCTGCGAAG     TTTCCGCCCCGTAGC  55 58
CL52_RS10565 2338400 .. 2338423 +  -4.5  -2.62396   CGCTGGGGGAAGTGG          CCGAC-GCCG GGCAA CAGCTGTCGG          TGGTATGGGCCGCTG  42 105
CL52_RS10610 NONE
CL52_RS10615 2349296 .. 2349315 +  -6.4  -2.52516   CGCTGTCGCGCGCGC            CGCTGCGGG AAT CCTG-AGCG            CTTGCTGCTGCCCAA  48 9
CL52_RS10620 2350885 .. 2350914 + -13.5  -4.15106   CGGCGCGTCTTGGAG       GCCAGCGTCGGCCG GGT CGGCCGGCGC-GCC       TTTTCCACCTTGGTC  85 105
CL52_RS10630 2352568 .. 2352584 +  -7.9  -2.70932   TCGGGGTGCGGAAAT              GCGCTTC GGC GATGCGC              TCCTTGCGCAGCGCC  51 179
CL52_RS10670 2362027 .. 2362042 + -10.4  -3.31726   AGCCATCCACCGCCT              GGCAGG GCCG CCTGCC               TGTTCTCTCAGCGCA  66 218
CL52_RS10685 2366076 .. 2366104 +  -5.2  -3.84451   CCAGACGCTGCCATC       GGCTGCCG-GGCGG CAG TCGCCGCGGC-GCA       TTTCGATTTCGGGAC  60 403
CL52_RS10700 2371796 .. 2371806 +  -4.6  -4.13767   GTGCTGATTCGTAGG                 GTGG ATG CCGC                 TTTTCGCATCCACCG  65 183
CL52_RS10705 2373205 .. 2373219 + -12.8  -5.37345   CTCAAAATATACTAA               GGGGCC ATT GGCCCC               TTTTTTATGATTGGA 100 44
CL52_RS20705 2374992 .. 2375017 + -12.7  -2.57132   CTTCGGCTGGCGTAG         GGTGGACAACGC TAT GC-TTGTCCACC         GTTCTACCCGCCGCC  67 105
CL52_RS10710 NONE
CL52_RS20410 2376518 .. 2376533 + -10.4  -3.85698   GGGGTCGGCTTACAA              GGGCCA TCCT TGGCCC               TTTATGCGGGGGCGC  76 208
CL52_RS10720 NONE
CL52_RS10725 2379087 .. 2379100 +  -3.7  -4.07568   TCACATCCAGCCCCG               GCACG TTGG CGAGC                TTTTGCCACGACGCC  61 379
CL52_RS10740 NONE
CL52_RS10745 2382209 .. 2382239 +  -7.4  -2.80935   TCATGCACGCGGGCG       ATGCAGGCCTCGAG CCG CTCGAGCCCGGCGC       TGTAGTGGATGGAGT  52 415
CL52_RS10755 2385313 .. 2385347 + -14.2  -3.19653   GCTTCTGGCTGAAGT     TGTCGGCCGGCTTGCC GAT GTCGAGCCGGTCGGCG     TTCATCACCTTGTCC  73 214
CL52_RS10770 NONE
        sohB NONE
CL52_RS10815 2397671 .. 2397701 +  -9.7  -3.05463   ACAATACCGGCAATG      CTGGCAGGAGGCGG CGCG CAGCTTCC-GCCAG       TTGAGTCCCGCCCAT  57 441
CL52_RS10850 NONE
CL52_RS10855 NONE
CL52_RS10860 NONE
CL52_RS10865 NONE
CL52_RS10870 2409812 .. 2409860 +    -5  -2.71712   TGAACAGGCCGGCCA GCGCCG-GCCTTGGCATCCGGCG GTGA CGACCACGGGCAAGGCTCGGCGC CTTTCCGGCAGCGCC  44 38
        imuA 2410594 .. 2410612 +  -5.2  -3.40403   CCTGGCAGTGAGGCC             TGCATGCT CTG GGCCTGCA             TTCTGCTCCCGCAAC  53 30
CL52_RS10880 NONE
CL52_RS10885 NONE
CL52_RS10895 NONE
CL52_RS10900 2417971 .. 2417997 +  -2.9  -2.73124   AGCCAAGTGCCGCCG        GCCCGTCTACCT TGCC AGG-AGCCGGAC         GTTTCCCGGCTCCGC  40 39
CL52_RS10905 2418926 .. 2418942 +  -7.9  -3.08679   GGCTCGCCTCTGCTG              GCCATGC CGT GCACGGC              TGTTGCGTCACGACC  54 294
CL52_RS10910 NONE
CL52_RS10915 2420370 .. 2420382 +  -5.5  -2.54896   GCTGATCCGCGAGCT                GGGGT GAA ATCCC                TGCGTTGGCTGGCGA  46 19
        egtD NONE
CL52_RS10925 NONE
CL52_RS10930 NONE
CL52_RS10935 NONE
CL52_RS10940 NONE
        nuoK NONE
CL52_RS10950 NONE
CL52_RS10955 NONE
CL52_RS10960 2429961 .. 2429976 +  -3.2  -3.13522   ACAGTGGCTGATCGC              GCC-GCT GCT GGCCGGC              TGTTGCTAACGCCGT  44 1
CL52_RS10965 2430247 .. 2430276 +   -13  -4.55128   GACCAAACAAGATAA       CGGGATCAGTAGC CTTAA GCT-CTGATCCCG       TTTTCATTTCAGGCT 100 36
CL52_RS11015 2439723 .. 2439751 + -17.5  -2.82602   CACCGTTCGACGGCC        GTGCGGTAGGCCA CAC TGGCCTGCTGCAC        TCCTTGCGTTTGCTC  82 323
CL52_RS20710 2441568 .. 2441578 +  -4.6  -2.71364   CAAGCACTGGCAGCC                 CGCC CAC GGTG                 TAATTCAGGCCATAG  43 415
        mobA NONE
CL52_RS11040 NONE
CL52_RS11045 2443525 .. 2443539 +  -8.5  -4.68724   GAGAGGCAATAAAAA               CCGGC CTTGC GCCGG               TTTTCTATTGCCTAG  88 62
CL52_RS11055 2445480 .. 2445509 + -19.5  -4.17089   TTCATCCGGCGTGAA       CAAGAAAACCCGC CTCG GCGGGTTTTCTTG        TTTTGCGCATTTAAA 100 41
CL52_RS11060 2446065 .. 2446084 +  -3.4  -2.62184   GTGACTCGTCGGTAA            CGGAGGCA GTAA TGCGGCCG             TCCTCTGACGCAGAA  39 26
CL52_RS11065 NONE
CL52_RS11070 2446890 .. 2446900 +  -6.8  -3.18274   ACCGCCGGAGCGAAT                 GGAG AGA CTCC                 TTGGATTGGAATACC  53 133
CL52_RS11075 NONE
CL52_RS11080 2449419 .. 2449429 +  -2.4  -3.05844   GCCAGCTTTCCACCT                 GCTG ACG CTGC                 TCTTCGGATACCGAG  41 113
        dacB 2451338 .. 2451354 +  -3.6  -2.72463   ACGGCAACCGTACCG              CTCAGC GCTGA GCCGAG              TCATTCACCGTGCCT  40 15
CL52_RS11100 2454504 .. 2454518 +  -2.7  -3.79747   CCTGGAAAACCGCCT               CGCCG ACCAA CGCCG               TTTCCTCGTCACTCA  56 462
CL52_RS11115 2456885 .. 2456914 +    -5  -3.78934   CTGTCGAGATCGTCG      C-GGAAGGC-CTCG CGCG CGAGCGCCTGCCAG       TTGTTCTCCACCGGC  58 312
CL52_RS11125 NONE
CL52_RS11130 NONE
CL52_RS11135 NONE
CL52_RS11140 NONE
CL52_RS11145 NONE
CL52_RS11150 2468442 .. 2468471 +  -2.7  -3.14132   GCCGCCGCTCTATCC       GCGCTGAGTCCGGG CAC CCTGG-CATATCGC       TTGCTACGCACCGGC  43 19
CL52_RS11155 NONE
CL52_RS11160 2470410 .. 2470450 + -16.2  -5.72207   ACCGATCAAGACAAA GGCGTCGTACCAC-CCTGC TCCG GCAGGCGTGTTGCGGCGCC  TTTTTTTCGTTTGCC 100 100
CL52_RS11165 2471771 .. 2471797 +   -18  -2.71364   AGCCGCCTGCGCGAG         CCGAGGGTGCGC ACT GCGCACCCTCGA         TCCTTCCCGACCTGA  86 39
CL52_RS11170 2473692 .. 2473721 + -21.5  -5.61881   ACGGGGACGGACAAA       GGCGTCCTACCGG GAAA CCGGTGGGACGCC        TTTTTGTTTTTCGCC 100 222
CL52_RS11180 NONE
        cobA 2478843 .. 2478884 + -10.2  -3.34895   CAACGCCCCCTCCTG CTCGCGCTCACTC-TCGGGC ATTC GCCCGATGAGCGAG-GCCAG TTCGTTCAGGCTGGG  63 346
CL52_RS11200 NONE
CL52_RS11205 NONE
        nuoC NONE
        nuoE NONE
        nuoF 2485149 .. 2485160 +  -5.8  -3.06796   GCATCGGCGAGAAGT                TGGC CCAG GCCA                 TTGCCTCGCCTGCCG  49 61
        nuoG NONE
        nuoH NONE
        nuoI NONE
        nuoJ NONE
        nuoK NONE
        nuoL NONE
        nuoM NONE
        nuoN 2495304 .. 2495334 + -16.9  -3.57144   TCACCCGCGCTGCAG       CCAGAACGCCCCG CCCGT CGGGGCGTTCTGC       TTTACGCATCAGCCC 100 42
CL52_RS11305 NONE
        chrA 2508611 .. 2508629 +    -8  -3.48772   TGGCTAGCCCTGCCT             GCGACTCG CCG CGGGCCGC             TTCTCTCGCCCGGTT  60 34
CL52_RS11330 NONE
CL52_RS11335 2515699 .. 2515721 +  -9.1  -2.60512   TTCTTTCCCCTCATG          GTG-GCGGCG CCGT CGCCGCTCGC           TGGCTTCGTGTTCCA  56 151
CL52_RS11350 2519236 .. 2519260 +  -9.9  -2.78384   TGGATGCAGTCACCG          CCGCGCAGCGG GCC CTGGTGCGTGG          TCTGGTGGACCGCCA  57 352
CL52_RS11380 2527930 .. 2527959 +  -4.1  -4.54047   AGCCCTGGAGTGCCC       CGTCCAGCGCTACG CCG CGATGCGCTGC-CG       TTTTATATCGCGTCG  72 201
CL52_RS11400 2533213 .. 2533235 +  -4.1  -2.51464   ATGACTGTGCATGGA           TCGCAGTCA GTCGA TGGCTGAGA           CTTCCTGGCTCATGG  41 5
CL52_RS11405 NONE
        soxR 2534499 .. 2534520 +  -7.3  -4.65933   ATCCGGAGCTACTGA           TCGACGTCCA TGC TGGGCG-CGA           TTTGTTTTGCCCGTC  83 64
CL52_RS11425 2536003 .. 2536016 +  -2.3  -2.87564   GGAAGAAGACTGAAC               GATGC CGCC GCTTC                TCTCTCGCCCGCTAA  40 28
        gspD 2538687 .. 2538730 +  -4.5  -2.52464   TCGGCCAGCGCCTGC GCGGAGGCGCAATGCGCCTGC ATGC GCAGCCGCA--GCGTCTCCAA TCCCTTGAGGAACAC  42 468
CL52_RS11505 NONE
CL52_RS11510 2558751 .. 2558767 + -13.7  -3.68222   CGCCGGAACGAATAA              GGGTGCC CGA GGCACCC              TTATTCAGCTTCGCC  84 26
CL52_RS11520 2560284 .. 2560309 + -13.2  -3.02144   GACGCCCCGGCGCAT         AGCGCGGCGC CAGCTT GCGCCGCGCC          TGTTGCCAAAAATCG  70 202
CL52_RS11535 2561971 .. 2561992 +   -13  -5.04601   AACCAGTTTCACGAA           GGGCCGCT CGAAAT AGCGGCCC            TTTTTCATTTCTGCC 100 36
CL52_RS11540 2562176 .. 2562195 + -13.6  -5.37593   ACCAAATACGAAAAA            GGCCACTC GATC GAGTGGCC             TTTTTTCGTTTCGGC 100 37
CL52_RS11545 NONE
CL52_RS11550 NONE
CL52_RS11555 NONE
CL52_RS11560 NONE
CL52_RS11565 NONE
CL52_RS11570 NONE
        rfaH NONE
CL52_RS11580 NONE
CL52_RS11585 2573393 .. 2573435 + -11.1  -3.02461   AGCCGCGCTGAGCCT GGCGCCGATGGCGCTGGCG CAGGA CGCCTTCATCGTCGGCGTC TGTTCGCACGAGTTG  66 69
CL52_RS11590 2574703 .. 2574724 +  -2.9  -2.52946   ACGACAGGGAGTAGA           CGAGATGAT CGTC ATCAACGCG            CGTTTTCTCACCCAG  39 84
CL52_RS11595 NONE
CL52_RS11600 NONE
CL52_RS11605 NONE
CL52_RS11610 NONE
CL52_RS11615 NONE
CL52_RS11620 2580009 .. 2580032 +    -3  -3.05384   TCCTCGTAGCGCCCG          CTGCGCGCCAG CAG CAGGC-CGAAG          TTGCGTAGCAGCGGC  42 272
CL52_RS11695 NONE
CL52_RS11700 2595544 .. 2595558 +  -4.2  -3.62046   AGAGCGGTGAGATGG               CGCG TCAGGCC CGCG               TTGTTCAGCCCGTAG  51 393
        rfbD 2597731 .. 2597745 +  -4.9  -2.85351   CGCCGAGCGACTGCC               CGGCG TGAAT CGCTG               TATACTCTCGCGCCA  46 135
        rimO 2599142 .. 2599161 + -16.4  -4.55128   AACCGCTACATGAAA            CGCCCCGC TTCT GCGGGGCG             TTTTCATTTCGGCGT 100 45
        trpB 2606205 .. 2606243 + -16.7  -2.79183   CGGCAACCGGGCGCT  CCCCGCCCGCGC-CGC TGAGCAAC GCGAGCGCGGGCGGCG   TATCATCGCGCTCCC  81 51
        tsaA 2607140 .. 2607150 +  -6.8  -3.14132   CCGGAGCTGTTCAGC                 CCGA TCA TCGG                 TTCGTCGCGCCCGAA  52 192
        lexA NONE
CL52_RS11785 2615271 .. 2615283 +  -3.3  -4.08394   TCCTCGTATTCGAAA                TCGCC TTC GGCCA                TTTTCCCCGCCATCT  59 115
CL52_RS11820 2625303 .. 2625343 +  -6.8  -2.71011   GGCCGGCTGACGCAG CCGACCTG-CGGCGGCGAAC CGG GATCGCCGCCGGCAG-TCAC TCATTGAGGACACCT  49 31
CL52_RS11825 2626101 .. 2626130 +  -4.1  -3.20382   GGCCTGCACCAGCGC       GGCAACGGCACGCT CGA GGCG-GTCGAGGCC       TTCGTCGATGTCGGC  47 390
CL52_RS11845 2628505 .. 2628530 + -19.1  -4.86621   CCGCCAGTTAAAAAA         GCCCCTGAGTC TTGC GACTCAGGGGC          TTTTTCGTTGCGCCT 100 35
CL52_RS11880 2634474 .. 2634487 +  -2.3  -3.54424   CCCGACAAATCCTTC               CGTGC CTAG GCACA                TTTGCCGCCCTGGAG  49 270
CL52_RS11885 2635737 .. 2635760 +  -6.6  -3.01712   AGTCGTCGGTAGCGA          TCTTGCGCAG GATG CGGCGCATGA           TCTTGCCCGAACGGG  49 155
CL52_RS11895 2639233 .. 2639250 + -12.7  -4.11216   CGCGGAAACGAAAAA             GGCGAGC CGAA GCTCGCC              TTTTCCCGATGCGCG  89 123
CL52_RS11915 2645954 .. 2645978 +  -7.1  -4.72497   CAATCCCGCCCCCGG          GTGTTTACACC ACG GGTGTGCACGC          TTTTGTTCATCGCTG  81 114
CL52_RS11920 2647512 .. 2647530 + -13.1   -4.7078   GGCAGGCAAGAAAAA             GCCCGGC ACATG GCCGGGC             TTTTTCGATCGTTCA 100 77
CL52_RS11935 NONE
CL52_RS11940 NONE
CL52_RS11945 2652816 .. 2652831 +  -4.6  -3.28924   ACTGACGCCGATCGC              CATGCC CTCG GGCAGG               TTGTGCAGGGCGATG  49 416
CL52_RS11955 NONE
CL52_RS11960 NONE
CL52_RS11965 NONE
CL52_RS11970 2657703 .. 2657716 +  -3.1  -3.14051   TAGGCCCGCACTGAT               CAC-CC ATG GGAGTG               TGTTCATGAACGTCA  44 38
        sulP NONE
CL52_RS11980 NONE
CL52_RS11985 2660539 .. 2660552 +  -3.1  -3.72743   TCCGCGCGGCACGAT               CGATGG TTC CCA-CG               TTGGTTTTCATGATG  53 234
CL52_RS12010 2662247 .. 2662262 + -10.4  -5.46657   GCAGAAACGAAAAAA              GCGACC GTCT GGTCGC               TTTTTTCTTGCCCTC 100 73
CL52_RS12025 NONE
CL52_RS12030 2664260 .. 2664282 +  -3.2  -2.84794   CGTTGCGGTTGCCTC           GCCCGGTCGC CCA GCGAACCGCC           TCCTTCTCCAGTTCG  41 128
CL52_RS12050 NONE
CL52_RS12055 2667903 .. 2667916 +  -9.5  -2.70498   TCGCTCGGTTGAATA               GCCCG GGAC CGGGC                CTTATATAGCCTATC  57 46
        htpX 2668849 .. 2668876 + -18.6  -4.60797   AAGCCTTGCAGAGCG        GAAAAGGGCGAC GCAA GTCGCCCTTTTC         TTTTGTCTATAGCGC 100 39
CL52_RS12065 2669635 .. 2669650 +  -5.4  -3.40403   TCGGCTGAGGCCCCG              CTGGAG AAAC TTCCAG               TTCTGCTGCAGCACG  53 91
CL52_RS12145 NONE
CL52_RS12150 2684755 .. 2684787 +    -4  -3.53444   AATAGACAACGAGCG     GCGCATGGCGCGGCA GGTC TGCCGAGGCAAG-GC      TTTGGAAACGGGTCG  51 191
        sodC 2699867 .. 2699888 + -17.3  -3.36327   AAGTAAGCCCCGCCA           GAGGCCGGC GAGC GCCGGCCTC            TTCTGCCTGCGATCA  91 35
CL52_RS12325 2716934 .. 2716952 +   -16   -3.3782   TGCCCCTGCATCCGG             CCCTGCGC TTT GCGCAGGG             TTCGTTCGCTCCATC  88 186
CL52_RS12335 2719637 .. 2719659 +  -2.6  -2.71712   CGATCAGCAGAGGCG          CC-GGCCCG CTCACC CCGGCCAGG           GTTTCCCGGCAGGCG  38 430
CL52_RS20730 2720356 .. 2720375 +  -2.1  -2.60901   GCAAAAGGCCTGCAT            TGGCG CGATCATATA CGCCA             CTTCGTTGGAACTCT  38 110
CL52_RS12345 2723353 .. 2723363 +  -8.2  -3.14132   CTGATACGCAGGCTC                 GGCG GCG CGCC                 TTCCTCGGCCGCAGG  56 400
CL52_RS12385 2730814 .. 2730829 + -10.4   -4.0162   GTAAGAAACAGAAAA              GGCTCC CTCG GGAGCC               TTTCTCGTCTCAGCG  78 37
CL52_RS12405 2734216 .. 2734235 +  -8.5  -5.78622   TCCTAATGGTCTTGA            CCCGGCT CCCTCA GGCCGGG             TTTTTTTTGCCATCG 100 196
CL52_RS12410 NONE
CL52_RS12415 NONE
CL52_RS12420 2736910 .. 2736923 +  -2.3  -4.07568   GGCCGCCTCGGCCCC               GCAAC GACT GATGC                TTTTCACGGAGACGG  57 116
CL52_RS12425 NONE
CL52_RS12430 NONE
CL52_RS12435 NONE
CL52_RS12440 2741550 .. 2741573 +  -5.3  -2.72049   ATCGCGAAGCACAGC          TCATCGGCCG CCCGC TGGCCGA-GA          TCGTTCCGCCCTATG  44 291
CL52_RS21475 NONE
CL52_RS12450 2745104 .. 2745130 +  -4.3  -3.49653   TGTTGTCGAGCATGG        CCC-CGGCTTCG CGAG CCACGCCGAGGG         TTCTGTCGGCCTCCT  52 341
CL52_RS12460 2747475 .. 2747528 + -10.2  -3.21924   CCGCGTTGACTCGAA CAGACAGCAGCGCCTGCAG-GGTCAA GGCA TTGGCCACGGC-GGCGCCGCTGGCGG TGTTGTCGAAGATGC  64 32
CL52_RS12470 2749098 .. 2749128 +  -3.1  -2.79796   TAGCGCCCGGCCGGT      ACGGACAG-GCGCG ACCG CGCGCACTGAGCGA       TCTGCTGCGCTGCGG  40 38
CL52_RS12475 2751563 .. 2751579 +  -4.3  -3.83026   GACGAGAGGCGTATA              CTGCTGG CCC TCTGCAG              TTTCCTGTCGCGGAG  58 39
CL52_RS12480 NONE
CL52_RS12485 NONE
        glpK 2755016 .. 2755036 +  -2.4  -3.53012   CAGGCGCGGTCATGC            GCGAATCC GAACA GGCTACGC            TTTAACCGAACGCCA  47 79
CL52_RS12495 2755956 .. 2755977 +    -3  -3.41222   ATTCTTTTGCGAATA           GCATGTTC AAAACC GAACATGA            TCTTTCGCATTCGAG  49 128
        glpD 2757719 .. 2757757 + -17.6  -3.18264   CTGGCTCTCGGCCAG  GTGCTGCTGCAGGA-GC GCGGCA GCATCCTGCAGCAGCGC   TTCCTGGCTGGGCGG  86 207
CL52_RS12515 2758507 .. 2758524 + -14.1    -4.128   GACTGAACGCGAAAA             GGCCCGG TTTC CCGGGCC              TTTCTATGTAGCGCT  93 35
CL52_RS12530 2760403 .. 2760422 + -16.4   -2.7185   CACTAGAAATGCAAA            GGGCCGCC TCAC GGCGGCCC             TCATTACCGGCTACT  81 35
CL52_RS12560 NONE
CL52_RS12565 NONE
CL52_RS12570 2767061 .. 2767089 +   -11  -3.42056   AGAGCTGCTCAAGGA       CAAGGGCTGAGGC CCTT GCCTC-GCCCCTG        TTCTCAGTTGCCGGT  71 16
CL52_RS12580 NONE
CL52_RS12590 2771193 .. 2771217 +  -4.1  -4.36914   CGTCGGCCAGCAACA          GTTCGGGCTAC TCG GTCGGCCGCAC          TTTTCTACGGACAAA  66 227
CL52_RS12630 NONE
CL52_RS12635 2779087 .. 2779112 + -17.5  -5.31456   TCCTTGCGACGGAAA         GGCCCGACCGG GAAA CCGGCCGGGCC          TTTTTTGTGCGTTCG 100 42
CL52_RS12650 2782652 .. 2782670 +  -5.3  -4.56775   GTCGTAACTGGAAAG            CCAGAGCG TCGG CG-TCTGG             TTTTTGCCAAGCCAT  74 111
CL52_RS12655 2782997 .. 2783021 +  -2.7  -2.71791   CTCGACCATCTCACC          GGCAAGCTCAG CCG CTGACCTCACC          CTTTCACCGGCCCCT  39 8
CL52_RS12660 2784308 .. 2784327 +   -10  -3.41745   ACTGCAACCACTGGA            GGTCATCC GGAC GGGTGACC             TTGATGTTGTCCGCG  65 118
         map NONE
CL52_RS12790 2815433 .. 2815450 + -12.7  -3.07935   GCTCGCCGGTTCAGT             CCCAGGG CTTG CCCTGGG              TTCGCTCGGTGCGAT  71 47
CL52_RS12830 2822607 .. 2822619 +  -4.7  -2.87136   CTGTGCGCCAACTGA                GCGCC CTT GGCAC                TGTCGTAGTTGGTGA  44 466
CL52_RS12855 2828174 .. 2828200 +  -2.8  -3.53012   CCGCGGGCTCTGGCT         CGGTCGGCTCGG GCA TCGGCTCGACGG         TTTCGACCACGGCGA  49 448
CL52_RS12865 NONE
CL52_RS12870 2829562 .. 2829583 + -11.5  -2.87211   TTATCTGAAAACGAA           ACGAGCGGC CGAA GCCGCTCGC            TGTGTGCACCCGAGT  64 33
CL52_RS12880 2831420 .. 2831431 +  -7.2  -4.72272   CGACCTGCCGCCGAT                CGCC TGAT GGCG                 TTTTTGGTCAGGCAG  86 19
CL52_RS12890 2833703 .. 2833743 +  -2.3   -3.5013   GATCCCAACCGAAGG  CATGGGTGCGTTGCACGAC ATC GGCGATCAGCCAACCCGTG  TTGCTTGGTTTGAGC  48 494
CL52_RS12900 2834779 .. 2834789 +  -8.2  -3.21354   TCCGGGAACAGTCGC                 GCGG CGA CCGC                 TTCGTCGATGTGTGC  56 340
CL52_RS12910 NONE
CL52_RS12915 2839846 .. 2839856 +  -6.8  -3.18681   CAGTCGTAACCGCAG                 GCCT GCA AGGC                 TTGCTCGACTTCGCC  52 290
        mutS 2844593 .. 2844622 +  -8.5  -4.87133   TCGGATATAACTGCG       CCGCGCGGGA-GCT GCT AGAATCCCGCGCGC       TTTTGTTTCGGAGCT  90 31
CL52_RS12940 2845069 .. 2845085 + -11.5  -5.24129   TCCAGCCGAAAAAAA              GCCCGCG CGA TGCGGGC              TTTTTTCTGCGCGCC 100 43
CL52_RS12970 2849889 .. 2849906 + -12.7  -5.98675   TAAGGCAAATAAAAA             CGGGAGC TTCG GCTCCCG              TTTTTTATTTTTATA 100 48
CL52_RS13000 NONE
CL52_RS13005 2856456 .. 2856479 +  -9.4  -3.22475   GGAGGTCGACCGGGT          CGCCGACCCG ATAG CGCGCCGGCG           TCTTGTCCAGGTGGC  61 420
CL52_RS13025 2860912 .. 2860943 +  -3.6   -4.2558   AGCCCTCCCCGTTGT      GAATATCTGGCGAGC CCC GCTCGCCAGC-ACCC      TTTTCCTCCCGAGTC  64 40
CL52_RS13030 NONE
CL52_RS13035 NONE
CL52_RS13040 2863431 .. 2863443 +  -4.7  -4.26903   CTCGATATGCTGACC                GCAGC GTC GCCGC                TTTTGCTCGCCTGAA  68 283
CL52_RS13050 2864814 .. 2864848 +  -6.3  -3.38339   AACACCACGCCATAG    CGCC-GCAGCAGCACG CGGG CGACCTGCTCCAGGCG     TTCGTCTTCGCTCGT  55 451
CL52_RS13060 NONE
CL52_RS13065 2870125 .. 2870138 +  -3.7  -3.06492   GTCGCGGTCGGTATG               CCAGG TGTG CCAGG                TCTTGCCGTAGGTGG  44 352
        egtB NONE
CL52_RS13080 2874327 .. 2874345 +  -5.8  -3.06796   TCTTGCTAGTTCCGA             CCGTGCCC GCG GCGCCCGG             TTCGCTGAACTAAAG  49 463
CL52_RS13090 2874702 .. 2874728 +   -13  -3.61398   CGGACAAGTGAATGC        GCGCGGCCGCC TTACTC GGCGGCCG-GC         TTCTTGCGGCGCAGC  77 30
CL52_RS13100 2876802 .. 2876832 +  -3.3  -3.54459   TCGACAGCGGCCAGA      TCACGGTCGATGGCC TGC GGC-GTCG-CCATGA      TTTCCGCGCCATTGA  49 222
CL52_RS13110 NONE
CL52_RS13115 NONE
CL52_RS13120 NONE
CL52_RS13125 NONE
CL52_RS13130 2880164 .. 2880199 + -26.4  -3.31263   CCTCTTTTATGCCAA    GACACAAAGGCCGCTC AGGT GAGCGGCCTTTGTGTC     TTCTAGCGATAGACT 100 230
CL52_RS13220 2898710 .. 2898733 + -10.2  -3.27022   CGATTCGCAGATCCA          GGTGGCCAGC TGCA GCCGGTCACC           TTCATATGCACTGGC  63 233
CL52_RS13260 NONE
CL52_RS13265 2905010 .. 2905023 +  -3.7  -3.40299   TTCAGACCTGCAGCA               GCCGC TCGC GCAGC                TTGTGAATCTCGTCG  51 62
CL52_RS13275 2908489 .. 2908503 +  -4.2  -3.53811   GGGCCGTGCGACAAG               GGGG TTGACTT CCCC               TTTGGAAACAGTAGG  53 80
CL52_RS13280 2908619 .. 2908638 + -11.4   -5.4833   AGCCAAATTTCAAAA            GCCTCGGT CAAT ACCGGGGC             TTTTTTATTGCCTGC 100 36
        rdgC 2911963 .. 2911977 +  -2.1  -3.53012   GACGACCAGGAACAG              CTG-CG GTAT CGACAG               TTTCAGCACGACCAA  48 206
CL52_RS13330 NONE
CL52_RS13335 2920231 .. 2920253 +  -8.3  -3.39327   CGTACAGGGCGCCGG           CGCGCTCGG CGATC TCGCGCGCG           TTCTGGCTCTGCCGC  60 290
CL52_RS13350 2924989 .. 2924999 +  -8.2  -3.06796   ACCGGAACAGGAGAA                 CCGC CAT GCGG                 TTGCGTCACATGCCG  57 40
CL52_RS13355 NONE
CL52_RS13360 NONE
CL52_RS13365 NONE
CL52_RS13370 2928360 .. 2928375 +  -5.4  -2.73364   GCGAAACAGCGCACG              CGG-CAG CGC CTGGCCG              TCGTTGCGGTAGAGC  45 288
        oscA 2932893 .. 2932917 +  -3.5  -3.53444   CAGGCTGCTTCCGCC          TCGCCCTGC CTGTCTT GCAGCGTGA          TTTCAGCGACCGTCC  49 201
CL52_RS13400 2934050 .. 2934081 +  -8.6  -4.09685   CATACGTCAGGCTCG      AGCGTGAGGCGCGT GGAA AAGCGCTTCGCGCG       TTTTCCACCCTACGG  73 98
        cysT NONE
        cysW NONE
CL52_RS13415 2937254 .. 2937311 + -10.6  -3.01712   CATCAGCACGTGCTT GTTC-TCGTCGCCCA-GTTGCGCCTGCGC CTC GCGCAGG-GCGGCCTGGGCTTCGGCGAGC TCTTCGCCCAGCGCA  62 156
CL52_RS13435 NONE
CL52_RS13440 NONE
        nrfD NONE
CL52_RS13450 NONE
CL52_RS13455 NONE
CL52_RS13460 NONE
CL52_RS13465 NONE
CL52_RS13470 NONE
        coxB NONE
CL52_RS13480 NONE
CL52_RS21490 2953300 .. 2953313 +  -2.3  -3.55444   GTACCGCGAGTAGCT               CATGC CCTG GCAGG                TTTCGCCACTGCAGC  49 28
CL52_RS21495 NONE
CL52_RS13490 2953823 .. 2953837 +  -3.4  -3.14211   TGCTGACCCGCGCCC               CGGTCT GAT GGCCCG               TTCGTCCAGCGCCCT  44 18
CL52_RS13495 NONE
CL52_RS13500 2955471 .. 2955485 +  -9.2  -3.61715   TCGGCCGGCAGCGCC               GGGGCC GGC GGCTCC               TTGTTCCAGCCGGTG  64 362
CL52_RS13525 NONE
CL52_RS13530 2959737 .. 2959759 +  -5.5  -2.66272   ACTGCGAAAATCACG          CTGCGAGCCG GGAT CGG-TCGCCG           TCACTTTCAATACGG  44 130
CL52_RS13540 2961601 .. 2961614 +  -4.5  -3.15544   GCAGACAGTCCAGGG               TGCGC TCCA GCGTA                TTCATCGCCATCCAG  47 205
CL52_RS13630 2977056 .. 2977088 + -16.9  -3.05715   CTAGCAGCCTGAGCC      GCCGCGCGTGGGCAG CTG CTGCCCGCGCGCCCC      TTCCCTGACGCCCTT  88 29
CL52_RS13650 2980192 .. 2980213 + -17.3  -4.05788   GTACTCGATCCTCTA           GAGCCCGGC GAAA GCCGGGCTC            TTTCGTTTACGAGAG 100 53
CL52_RS13655 NONE
CL52_RS13660 NONE
CL52_RS13665 2983629 .. 2983640 +  -2.2  -4.15044   CGATGCGGGCCAGCA                G-GCC ATC GGCAC                TTTGTTCGCCGACCA  58 67
CL52_RS13675 2984646 .. 2984674 + -13.8  -2.95298   TTCAGGCCTGACTAA        CCGACCGCCTGC TCCAC GCGCGCGGTCGG        TCTATCCTCCATGGC  74 30
        arsC NONE
        wrbA NONE
CL52_RS13700 2987678 .. 2987688 +  -2.4  -3.34398   GGGAAAGCTGACCGC                 GAGC CTG GCGC                 TGTTTCGCGGCGCCA  45 30
        purM NONE
        purN NONE
CL52_RS13735 2993841 .. 2993858 + -11.3  -4.21194   GCGCAGCTACTGCGC             CACTCGC CTTC GCGAGTG              TTTTGAATGATCCGC  84 44
CL52_RS13740 NONE
        dapC 2995800 .. 2995814 +  -3.5   -3.8917   GATCAGGCGACCCCC              GG-CGG AATG CCGTCC               TTGTTGTAGTTGCGC  56 69
CL52_RS13755 NONE
CL52_RS13760 NONE
        dapD NONE
CL52_RS13770 NONE
CL52_RS13775 2999974 .. 2999991 +  -3.3  -3.85817   ACCGACGGAGCCGAC             CGGCAGG TCGT CCTGGTG              TTTGTGGAAGGCGAT  56 120
CL52_RS13795 3003610 .. 3003634 +    -5  -3.43492   TCAGCGCCGACGCAG         CG-GCTCGAGC AAGG GTTTGAGCCCG          TTGTGGTCGATCTCC  53 41
CL52_RS13805 3004716 .. 3004737 + -10.1  -3.61356   GCCAGCGCGGCGATT           TCGTGGCGC AGCC GCGCCAGGA            TTTCCACTGCCTGAT  67 241
CL52_RS13825 3008649 .. 3008674 + -18.3  -4.72272   GCACGATGCCAGACA         GGCCCGGCAGGG AAA CCC-GCCGGGCC         TTTTTCGTCCGCCGC 100 52
CL52_RS13830 3010363 .. 3010409 +  -8.6  -2.89822   CTCGATCTCGTGCAG CCTGCGGCGCTGGCCGTCGGCC AGGTA GGCCG-CTTCCAG-GCCACGGG TGTCGTACTTGTTCT  54 335
CL52_RS13840 3012686 .. 3012722 + -11.6  -2.64218   CCAGGTCGCTCAGGC   GGCTG-GCGGTCTGGTGG TTG CTACC-GACCGCGCTGCC   ATTCTCCTCGGCCAT  61 128
CL52_RS13850 NONE
CL52_RS13855 3018122 .. 3018134 +  -6.2  -2.78463   GCCGAGGTCTGCTGG                GCGC CGGTC GCGC                TCTGCTCGGACACAT  47 138
CL52_RS13865 3020852 .. 3020866 +  -8.5  -3.05384   CTCCCTTCGTAAAGC               GCGGC CGATT GCCGC               TTCGCTGAACCGACG  57 496
CL52_RS13875 3021668 .. 3021681 +  -4.5  -2.82933   ACCGGCGACAGGCAG               GTCTG CAGT CAGGC                TGTCGTCGGTTCAGA  44 56
CL52_RS13880 3023342 .. 3023386 +   -10  -3.14344   CGGTGCGGCACCGAC CAGCGCCAG--GTTCTGGCGCA AGG TGCGCCAGGGCAGCAGGCGATG TTCCTGGAACAGATA  62 401
CL52_RS13905 NONE
CL52_RS13910 NONE
CL52_RS13915 3028716 .. 3028735 +  -5.6  -3.55444   GGCCACCCGCGCCGA            GTGCAGCC GCAG GGCTACGC             TTTCCAGCCTGAACG  57 69
CL52_RS13920 3029348 .. 3029376 + -10.1  -2.73483   CAACCGCCAAGCCTC        ACGATCGCCGCGC CGC GGGCGGCGCTCGA        TAGTTCAGATCAGCT  60 148
CL52_RS13930 3031519 .. 3031536 +  -4.1  -2.62184   GAAAGATCAACGACA             GCTGCATG ACC CGTGC-GC             TCCTGTCGGGCGCAC  40 191
CL52_RS13960 NONE
CL52_RS13965 NONE
CL52_RS13970 NONE
CL52_RS13975 NONE
CL52_RS13980 NONE
CL52_RS13985 NONE
CL52_RS13990 NONE
CL52_RS13995 3045662 .. 3045676 +  -7.1  -3.59979   ACACAACAACAAGTC               GGCAG CCCGC CTGCC               TTTGCACTGGAGGAA  59 66
CL52_RS14000 3046341 .. 3046363 +  -3.3  -3.35679   CTAGAACAGCGACAT           CAGCGCACA GCTTG TATGCGCCG           TTGTAAATCACAAGC  46 117
CL52_RS14005 3048704 .. 3048716 +  -4.7  -3.61178   ACAGCCTTCAATCAC                GACCG GTT CGGGC                TTTCAACTCGGTGGA  55 133
CL52_RS14010 3050148 .. 3050188 + -10.4  -3.06133   GCTTCTGACCGGCGC ATGAAGCGCGGCGACCGCGC AAA GC-CGGTCGCCGC-CTGCGC TTCGCTCAAGCCTTA  62 33
CL52_RS14015 NONE
CL52_RS14020 NONE
CL52_RS14025 NONE
CL52_RS14030 NONE
CL52_RS14035 3056417 .. 3056445 +  -3.2  -2.52896   GTGGGGGCGAACTCG        TTCGCCCA ACACCTGATGCCA TGGGCGAA        TGAATTCGCCCCTAC  39 43
CL52_RS14040 NONE
CL52_RS14045 NONE
CL52_RS14050 NONE
CL52_RS14055 NONE
CL52_RS14060 NONE
CL52_RS14065 NONE
CL52_RS14070 3060558 .. 3060604 + -19.5  -2.87132   AGCGCATCTGGAACA GGCGAGCCGGCTAGCGTCGCAT CGAG GTGCT-CACTAGCCGGCTCGCC TGTCTGGACACCACG  93 40
CL52_RS20760 3064451 .. 3064467 +  -2.2  -4.42386   AGGCCATAACTCGGA              ATGCTG GCCGA CAGCAG              TTTTGTCAGTAGACC  65 32
CL52_RS14095 3066533 .. 3066553 +  -5.3  -3.55444   GATGGTTAATAGAGG            GCGGCTTTC GTA GAGGGCGGC            TTTCGGCCATAACCA  55 32
CL52_RS14100 3069403 .. 3069432 + -15.7  -2.66316   GGGTATTTGCCGATA       GGTGAGCCGTGCC TGTA GTCGCGGCTCACC        TGCTGTGATGGCGAG  77 40
CL52_RS14110 3071429 .. 3071442 +  -3.1   -3.6502   CCGGCGCGGCGGTGC               GCC-TG GAC CACGGC               TTTCGCTCCGGCATC  53 202
CL52_RS21510 3073097 .. 3073109 +  -4.7  -3.53091   CGTGCGGGTGCGGAC                GCCTG AGC CTGGC                TTTCGGCGCCAAAGT  53 127
CL52_RS14125 3074073 .. 3074107 +  -9.3  -3.05596   CTCAAAGACAGATGC    GTAGCGC-GCTGTCCG CTTG TGGGCAGCCGCGTTGC     TTCGCTCGGCCGATC  60 158
CL52_RS14130 3076632 .. 3076669 +  -3.9  -3.28712   CCTGAATCACGAAGC   GCCCGCTCGC-CTCGACC AGT GCGCGGGTGCGGGTGGCC   TTGTCGAGCACGACG  47 396
CL52_RS14155 3086055 .. 3086073 + -13.8  -4.72272   AAGAACCAAAAAAAA             GCCCCGCG GCA TGCGGGGC             TTTTTCCTGGAACGA 100 40
CL52_RS14170 3090790 .. 3090806 + -13.7   -4.2573   CTGGATCAAGAAAAA              CCGGCCT CTG AGGCCGG              TTTTCGGGTTGTTTG 100 418
        rapA 3094968 .. 3095018 +  -8.4  -4.11394   GGCCCGTGCTACCCG GCCCG-CGCGATCCGCCAGTAGCGCT GCC AGCGCTG--GGTG-AGCGCGCCGGGC TTTTCCGCGTAGAGT  76 96
CL52_RS14225 NONE
CL52_RS14230 NONE
CL52_RS14235 NONE
        phnE 3104293 .. 3104308 +  -8.2  -3.01712   CTCGGTGATCTCGTC              CTGGCG CAGG CGCCGG               TATTCGCCGAGCAGA  55 96
CL52_RS14295 3112435 .. 3112454 +   -10  -4.64861   CATCCAGTCGACAAA            GCCCATGC CACG GTATGGGC             TTTGTTTTAGCGGCG  95 49
        livH NONE
CL52_RS14305 NONE
        livG 3115599 .. 3115613 +  -4.2  -3.54129   CTACCTGGGAGAGGC               GTAAGC GAT GCTGAC               TTTCGAGAACGTCTC  53 22
CL52_RS14315 3116481 .. 3116507 +  -8.7  -3.08679   ACTGCAGGAAGAGCA         TCTGCGCCACC CCTTC GTTGGCGTAGA         TCTTCGCTGGCAAGG  56 199
CL52_RS14325 3117493 .. 3117510 + -14.1  -5.04601   TTCGGCTAGTAGAAA             GCCCCGC TCAT GCGGGGC              TTTTTCGTTTCTGCC 100 48
        metG NONE
CL52_RS20765 NONE
CL52_RS14340 3121920 .. 3121930 +  -4.6  -2.66812   TGGTAAAAAGGCAGC                 CGTC GCG GGCG                 TCGTATAATGGCATT  43 97
CL52_RS14345 3122044 .. 3122062 +  -3.1  -5.14985   CAAGAGAGTCTGCAA             GTCGTTG CCACA CAAAGAC             TTTTTCTCTCTTTGA  82 71
CL52_RS14350 3124130 .. 3124146 +  -6.7  -3.67022   CCTGGACATTATTCA              TATTAGT GAT ACTAATA              TTCATTTATGGTTTA  59 67
CL52_RS14355 NONE
CL52_RS14360 NONE
CL52_RS20770 NONE
CL52_RS14375 3127709 .. 3127732 +    -6  -3.61398   AATCGCCTTTACAAA          TGGTGACTGCT ACA AGCTGTC-CCA          TTGTTCAAAAGGAAA  57 47
        hcaB 3128534 .. 3128548 +  -2.1  -3.07043   GCGCTCGGTCGCAAG               TAGGT TTGTC GCCTA               TCTTGAAATAATAAC  41 23
CL52_RS14385 NONE
        nahC 3131018 .. 3131059 +  -4.5  -4.28361   CTTCCAGATATGCGT TGGGGAAAATTACTTATGC TCCT GCAGTATTAATTTTCCCGA  TTTTGCTCCGGTTCA  66 72
CL52_RS14395 3132597 .. 3132617 +  -3.9  -3.93769   TGCCATCCTTGATGA            GGCAACCCA CTG TTGGTTGGC            TTAGTTTTTTGGAGT  58 240
CL52_RS20775 3133708 .. 3133719 +  -3.6  -4.42788   TGGTAGAATTACGCG                GCTC GTGT GGGC                 TTTTCTAAGGTTGCG  67 454
CL52_RS20785 3135401 .. 3135429 + -20.3  -3.57561   TTCTTTCTGGATTTT        TAGCCGCCGCGAG CAC CTCGCGGCGGCCA        TTTCCCGCATTACAG 100 232
        salA 3145323 .. 3145340 +  -2.5  -3.16475   TTTCAGCCGCTAGGC             CGACGCC CATG GGAGCCG              TTGGATCTGTAAATA  43 158
CL52_RS20795 NONE
CL52_RS14455 NONE
CL52_RS14460 NONE
CL52_RS14465 NONE
        dmpE 3150021 .. 3150034 +  -5.2  -3.29471   TCGGCGGCATCGGCA               GCGC CTCCGT GCGC                TTCATCTGATCGAGG  50 3
CL52_RS14475 NONE
        dmpG NONE
        dmpH 3152833 .. 3152853 + -15.4  -3.38812   TCGTCTGAGCCATCC            GGCCGCCC TGCCC GGGCGGCC            TCTTCTTCAGGAGGC  84 33
        xylH NONE
CL52_RS14495 3153826 .. 3153855 + -10.7  -2.74012   GGCTGCGCTTGACCA       CCTTGCGCGCTGG TTTG TTATCGCGCAAGG        TGGTTGGCCTGGTCG  63 315
CL52_RS14510 3155992 .. 3156006 +   -10  -5.37043   ATCCTGACAAGCCGG               CGGCTT CGA AAGCCG               TTTTTTATGTCAGGT 100 218
CL52_RS14540 3163243 .. 3163271 +  -7.4  -3.67597   CGCATCGACCCGCAT        GTGACCGACG ACGACTGAA CGGCGGTCAC        TTCTTCGATACGGCG  62 8
CL52_RS14640 3181966 .. 3181977 +  -7.2  -3.28712   ACAGTGCCTGCTGGA                GGGG CGAT CCCC                 TTATACGAGCGGGCC  58 46
CL52_RS14645 NONE
        brxF NONE
CL52_RS14655 NONE
CL52_RS14660 NONE
CL52_RS14665 NONE
CL52_RS14670 NONE
CL52_RS14675 NONE
        pglZ NONE
CL52_RS14685 3198423 .. 3198444 +  -2.9  -4.22214   TTTACCCCAGCCGAT           CAGCCCAGGG CCT TCC-GGGATG           TTCTTTTGGATGCGT  61 274
CL52_RS14690 NONE
CL52_RS21260 3241378 .. 3241393 + -10.4  -2.80699   TTCGCGGCCCTGGTT              CGCAGG AACG CCTGCG               TCATATTGCTTGGCC  60 179
CL52_RS14925 3242797 .. 3242814 + -11.3  -5.01811   ATACCGCACGTTAAA             GCCCTGT TTTT ACAGGGC              TTTTTCGTTTGGTCC 100 292
CL52_RS14930 3243955 .. 3243971 +  -6.5  -3.25088   AAGTGTGCTGGCGAG              CCTTCTC GTC GAGCAGG              TTGCTGCCTTTGAGA  53 174
CL52_RS14940 3246318 .. 3246334 + -15.1   -4.1891   GACGAAACGAAAAAA              GCCCCGC CAA GCGGGGC              TTTCTGTTGCGCGGC 100 39
         lon 3254750 .. 3254764 +  -3.4  -4.26019   GTCCGGCCTCGCCTG               GCTGCT CCC GGCCGC               TTTTGGCTATCCTTC  64 125
CL52_RS14965 3255209 .. 3255226 +  -3.3  -3.60627   TCGAGGTACGCTGAA             GCACGGCC AGA GGGCG-GC             TTTCCGCTACAATGC  51 27
        cmoA NONE
        cmoB 3257018 .. 3257062 +  -7.6  -4.66163   CTAGTCAGCGGCGCA GCAATGTCGCCGCTGCGCCA TCGAT TGACGCAGCGGCAGCCGGGC TTTTTCGCTGAGCAT  83 69
CL52_RS14985 NONE
CL52_RS14990 3258571 .. 3258591 + -11.1  -3.56092   CTAGGGTGGAATACG            GCGCCCC GCACTTG GGGGCGC            TTTGCGCGCTGATGA  73 37
        nadB 3270479 .. 3270499 +  -6.7  -3.63694   CATGCGAACCATCCG            CCGCAAGTC CTC GTCCTGCGG            TTCTTCACGCTCCAT  61 475
CL52_RS15060 NONE
CL52_RS15065 NONE
CL52_RS15070 3273562 .. 3273591 +   -13  -2.79915   CCACAGCAGAAACAC       GAGAT-GTGGCCG TCGGT CGGCCACGATCTC       TATGATCCGGTCGGT  67 245
CL52_RS15080 3275645 .. 3275659 +    -7  -4.07568   AACGTCTGACATGGC               CGCCGG CGG CCTGCG               TTTTGGAGAGCGAGC  67 111
CL52_RS15085 3276912 .. 3276923 +  -5.8  -4.25283   ACGACAGCGCCATCA                CGAG CACA CTCG                 TTTTCATGGACACCT  69 441
        rsxA 3277706 .. 3277722 +  -2.9  -3.14527   GCTTTACCGGGCTGA              TCAAGCT ATG AGCATGG              TGTTGGTCGCCGTTC  44 15
        rsxB NONE
        rsxC 3280744 .. 3280765 +  -2.2  -2.52464   GCGATTGCGTCGGGC           GCC-CTGAC AAAAA GACAGCGGC           TCGATTAGGAGCACG  37 40
CL52_RS15110 NONE
        rsxG NONE
CL52_RS15120 3283369 .. 3283390 +  -2.3  -3.09516   GCCGCGTGCGGGTAA           CCGGAGTCAT CGA ATGA-TCCGC           TTGCCTCATCCGGCC  41 9
         nth NONE
CL52_RS15130 3284480 .. 3284492 +  -4.7  -3.14132   GACGAAGGCCAGGAT                GCTCG AGC CGTGC                TTCATCGGCCCCGGC  47 130
        pyrC NONE
         rnt 3289001 .. 3289020 + -13.6  -4.67038   CCTCGCAACGCAAAA            GGCCCATC GTTC GATGGGCC             TTTTCGTTTTCGCCG 100 66
        ccsA NONE
CL52_RS15210 NONE
CL52_RS15235 NONE
CL52_RS15240 3303855 .. 3303881 +  -8.7  -3.51137   GGCACGCAAAAAGAA        GGCCCGG-TGCA TAGC TGCAGCCAGGCC         TTCTCTACCCTCGTT  63 502
CL52_RS15275 NONE
CL52_RS15280 3314164 .. 3314177 +  -3.7  -3.33865   GATGGCGCAATGCTT               CGCCC GCTC GAGCG                TCTTGCTTTAAACTC  48 55
        rhlB 3315673 .. 3315694 +  -5.1  -3.09834   TGCAGGTCAGCGCGG           CGC-AGCCTG CCA CAGGCTAGAG           TTGCCTCATCACGTC  47 69
CL52_RS21365 3316225 .. 3316241 + -13.7  -2.73364   GCTCGAGAAACATGC              CGGCCAC CTC GTGGCCG              TCATTGAAGTCGCGC  69 354
        yaaA 3321051 .. 3321073 + -13.4  -3.05596   GCCGCTCCAGCCAAG           CGCACAGCCC ACG GGGCTGTGCC           TTCGATCCGCAAGTG  75 321
CL52_RS15320 3322873 .. 3322895 + -16.3  -5.24531   TCGACCCGCCTGAAC           GAGCCCGCG CCTGT CGCGGGCTC           TTTTTTGTCAGCCAT 100 41
CL52_RS15325 NONE
CL52_RS15330 3324548 .. 3324563 +  -3.2  -4.09864   GAAACCGGTCAAAAA              GGCC AAAATCCA GGCC               TTTTGCGGCCTCCGT  58 85
CL52_RS15345 3327938 .. 3327965 + -11.2   -5.1963   TACGGAAGTACCGCA        GCCGCGCCAG CGAGCAAT CGGGCGCGGC         TTTTTATTGCTTCAC 100 46
CL52_RS21535 NONE
CL52_RS15360 NONE
CL52_RS15365 NONE
CL52_RS15370 3334946 .. 3334961 +  -4.6  -2.91276   TGCGTGACGACCGAG              TCGCGC CCAT GCGCCA               GTTTCTGAACCCGAC  46 34
CL52_RS15375 3336677 .. 3336691 +  -7.1  -3.05596   GACATTCAGGTAGTA               CGGCA GTTGA TGCCG               TTGAATGCGACGCTG  51 405
         pyk 3339213 .. 3339244 +  -4.4  -4.07687   GGCGTAGAAAAAGGT      TCATCGC-GCTTTCC CGG GGAAGGCAGCCTTGA      TTTTCAGAAAGAAGT  61 47
CL52_RS15415 3344346 .. 3344365 + -16.4  -4.61873   CCCAGGTGCAAAAAA            CGCCCGGC AGTC GCCGGGCG             TTTTCGTTTCTACAG 100 44
CL52_RS15435 NONE
CL52_RS15440 3349007 .. 3349023 +  -3.6  -2.65815   ATCGGCTAAGCTGCA              GCGATG AACTA CCTCGC              TCATCTGCATCTCGG  39 48
CL52_RS15445 3349600 .. 3349611 +  -5.8  -3.53012   GGCGTAGCCGGGGCT                CTGG GCGT CCAG                 TTTGCGGAGCAGCGC  55 34
CL52_RS15460 3351706 .. 3351750 +  -2.7  -3.65046   ATCTGGTGTAAGCTG CCTGGCCCTGCCGGTG-CGAT TGACC ACCGGCCCCGTC-GAGCCAGG TTCTTCGCATGAGCA  49 30
        folM 3352449 .. 3352461 +  -9.1  -2.66316   ACCCTCAGGGTGAAT                GGTGG CCG CCACC                TGATCTGATCGAGGA  56 5
        folX 3352862 .. 3352901 + -12.1  -3.40403   ACCGAGACTGAACCG  CCCAGGC-CTTGGCAGCG CTGGC CGCTACCAGGAGCCAGGG  TTATGATCCGGCCAC  74 30
CL52_RS15475 3353233 .. 3353247 +  -4.2  -2.71712   GAGAAGACCCACAAG               CCATGA ACC TCAAGG               ATTTCCGCGCCAGCC  42 20
CL52_RS15480 3353587 .. 3353601 +  -7.1  -2.87132   CCTCGCGCGCGACGG               GCTGC GCCGA GCAGC               TGTATAAAAAAGGGG  50 42
        cysZ 3354856 .. 3354869 +  -5.9  -3.68569   GCCCGACCGCCACCA               GGTCG AATT CGGCC                TTGTTCAATCGCTCC  59 325
CL52_RS15505 3358536 .. 3358560 +   -15  -4.36127   GCTCCGCAGTTCCGA          CCCGGCACCT CTCGA GGGTGCCGGG          TTTTGCCTTGTTAGC 100 56
         pta 3360777 .. 3360803 + -17.3  -4.73388   GCACGCGCCAGCAAA         GCCCGCCCACG CCGCA TGTGGGCGGGC         TTTTTACTGCCGCTT 100 42
CL52_RS15515 3361890 .. 3361900 +  -2.4  -3.35679   GATAGCCCTGCATCA                 CGTC GCA GCCG                 TTGTCGATCAGCCAG  46 121
CL52_RS15550 3372892 .. 3372912 +  -3.8  -3.04398   TGTCGGCACAGCGAT            CCGGGCTG GTAAG CTGCGCGG            CTTTTCAGGGAGGCA  45 42
CL52_RS15555 3373929 .. 3373940 +  -7.2  -3.53091   GCTCGCAAGGGCTGA                GCGG AGGG CCGC                 TTTCCGACCAAGGGT  60 26
CL52_RS15560 NONE
CL52_RS15565 3375679 .. 3375697 + -10.3  -3.73224   GCCTCACGGCCATGC             TCGCGCA AGGCA TGCGCGA             TTTCATGCCCCATGA  70 399
CL52_RS15590 3378973 .. 3378993 +    -4  -3.53012   CGGAGTCTACCGGAG           CGACCG-GCA CAG TGCGCGG-CG           TTTCCGACGGAGCGA  51 366
CL52_RS15600 3380638 .. 3380655 + -14.1   -4.8622   CGACGCAACAAAAAA             GCCCGCC AAAT GGCGGGC              TTTTTCATTCGACCG 100 44
CL52_RS15610 3381623 .. 3381651 + -21.8  -4.07568   ACACGCAACGAAAAA        GCCGCCTGGCAC GCTGA GTGCCAGGCGGC        TTTTGCAACAGCGCG 100 54
        dauA 3385683 .. 3385705 +   -12  -3.33261   GCTGCAGGAGCCGAC           GCAGGCCTGA CGA TCAGGCGTGC           TTCTGCAGGTTGGCC  72 16
CL52_RS15635 3387809 .. 3387834 +  -8.9  -3.64162   TCAAAAACCGAGCAA         CCTCGCC-GCAG CCA CGGCTGGCGGGG         TTTGCAGTGGTTCAT  65 52
CL52_RS15640 3388519 .. 3388537 +  -4.4  -3.14344   AGGTCAGCCAGGCGC             TGGCGGAC GCC GGCCTCCA             TTGATCGGCGCACTG  47 3
CL52_RS15645 3389126 .. 3389164 +  -3.7  -2.64616   CTCGCCGGCGCGGTA  GCGGATACTGCGCCGCGT CCAC AC-CACCGCCGTCTCCGC   TGATGTCCCTCAAGA  41 49
CL52_RS15650 NONE
CL52_RS15655 NONE
CL52_RS15660 NONE
CL52_RS15665 3392306 .. 3392361 +  -3.2  -4.25104   CGATGGCATCGAGAA TCTTGTGTTTGACGAACTCGTCCT-CG TAA CGCAGGCCGTCTTCGTTCAGCACACGG TTTTCGTCCACCACA  63 346
CL52_RS15755 NONE
CL52_RS20855 NONE
CL52_RS15765 3414421 .. 3414435 +  -2.8  -3.50853   CAACTGTTCGGGAGT               GAGG AATGACC CCTC               TTCTGCTTCGCGCGC  49 17
CL52_RS15770 3415093 .. 3415106 +  -2.3  -3.86015   GCAGCTCCGTCATCC               TTGGC ATCA GCCAC                TTTGTCGCCACCATC  54 114
CL52_RS15810 3421316 .. 3421332 +  -3.5  -3.21924   GATCGCGGGCCAGCA              CCCGCTG AAG CTGCAGG              TCTTCTGGCACATCG  47 398
CL52_RS15835 3426598 .. 3426623 + -17.7  -5.38047   GGGCTTCCCTGAAAA         TCCGATGCCAG GTTT CTGGCATCGGA          TTTTTTATGTCCCTC 100 188
CL52_RS15860 3432042 .. 3432064 +  -5.6  -3.41602   AGGCGAGTGCCGACT          CCA-GCGCT TCGAGC AGCGCCTGG           TTCTGCTCCGGTGCA  55 80
CL52_RS15920 NONE
        kdsC NONE
        lptC NONE
        lptA NONE
        lptB NONE
CL52_RS15945 3445906 .. 3445923 + -11.3  -3.21276   TCGGAAGGTTTGGAT             GGCAGAC CGAG GTCTGCC              TCTTCTGCGGAAAGC  67 56
        raiA 3446239 .. 3446249 +  -2.4   -2.7185   AAAGCAGCTCGACCA                 CTCC CAG GGCG                 TCGTTGCCCGCTAAT  39 1
        ptsN NONE
        rapZ NONE
CL52_RS15965 3448133 .. 3448180 +  -8.6  -3.09516   TCTCCACGTCGCAGC CGACCGC-GGCGATCTGACG-GA ACATG TCGCG-CAGATTGCCGGCGATCG TTACCTCCTGCACCG  56 145
CL52_RS15975 3450456 .. 3450484 +  -3.7  -3.43492   GGCCGTTGCCGGTCG        GCGCGACGCCC ATCAGGC GAGCGTTGAGC        TTGTCCTGCATATAG  49 460
        gatC NONE
        gatA 3463110 .. 3463124 +  -3.5  -2.57132   CACCGACTGGCACAC              CCGCGC TCCG GC-CGG               ATTCTGAGGAAACAG  39 4
        gatB NONE
CL52_RS16035 3465156 .. 3465171 +  -3.2  -3.35934   CACGGGGGAAAGCAC              CTGGTG TCAC CGCTAG               TTCTCGCCTATCTCG  46 78
CL52_RS16040 3466204 .. 3466223 +  -5.6  -2.99609   CAGTGATCTTTCTGC            GCGCCTGGC GAC GCC-GGCAC            TGATTTCCTACTCTT  49 3
CL52_RS16045 NONE
CL52_RS16065 3471146 .. 3471198 + -11.1  -3.62522   CATGGTCGCCGTGAA GCCTGCCGCTGGCCGCTTAGCCGG CCGTGT CCGGCTCGGCGGC-GTCGGCCTGC TTCTTCGCCGCCTTC  73 72
        smpB 3472647 .. 3472673 +  -9.2  -3.42459   CCGCTCGCCATGCCG         GCGCTGCGCCCG GGC CAGACGCTGCGC         TTCCTGTTGTCCCTC  63 92
CL52_RS16090 NONE
CL52_RS16095 NONE
CL52_RS16100 NONE
CL52_RS16105 NONE
CL52_RS16110 3481268 .. 3481291 + -16.7  -4.13995   GCCTGAGTGGCCCAA          CGGCCCGGC CGCCAA GCCGGGCCG           TTTCGTTTGTGGCAG 100 35
CL52_RS16115 3481738 .. 3481785 +    -4  -3.10244   TCCGGCGCCGGCCAG TAAGAAAGGCGGCCCGGGCCGG CTTGCA CCGGCCCGG-CCG-CACCCTGA TCATTTCTTAACCAG  45 23
        ssrA 3482266 .. 3482287 + -11.6  -5.60689   CCACCAATATTCAAA           CCCCAACC ACTCTC GGTTGGGG            TTTTTTCTTATGTGC 100 35
CL52_RS16120 3483258 .. 3483269 +  -2.2  -4.18018   GTGCTGACCACATCC                GGCT GGCC AGTC                 TTTTCAATACGCACC  62 488
CL52_RS16155 NONE
CL52_RS16160 3489162 .. 3489175 +  -9.5  -5.42514   CAGCATCACGCACAA               CCGCC TTCG GGCGG                TTTTTTGCTTTCTGG 100 56
CL52_RS16165 NONE
CL52_RS16170 NONE
CL52_RS16175 3490295 .. 3490322 +  -4.1  -2.77899   CGCCAGCATCAGCAC        TGAGGAGGC-CG GCAAA TGAGCCTCCCCA        TCATTACTGCAGACC  42 7
CL52_RS16180 NONE
CL52_RS16185 NONE
CL52_RS16190 3493575 .. 3493588 +  -2.3  -3.28447   CGACCCACGGCGCTA               CTCGG ACCG CTGGG                TGTTCTGCTCCATGC  45 105
CL52_RS21375 NONE
CL52_RS16200 NONE
CL52_RS16205 NONE
CL52_RS21540 NONE
CL52_RS16215 NONE
CL52_RS16220 3498390 .. 3498418 + -14.5  -4.13654   ACCTAACCCCATGAA        CCCGCCCTGAGCA CCA TGCTCTTGGCGGG        TTTATCATTTCAAGG 100 205
CL52_RS16225 3500204 .. 3500218 +  -3.4  -3.79668   CTTGGTGTTCCCCCG               GGTGCG TGG CGCGGC               TTTGATCGGTTCGAT  56 508
CL52_RS16245 NONE
CL52_RS16250 NONE
CL52_RS16255 NONE
CL52_RS16260 NONE
CL52_RS16265 NONE
CL52_RS16270 3506997 .. 3507015 +  -6.6  -3.05816   TCGACATCTTTAACG             ACGACGCC TTC GGTGTCGC             TTCGCTCACCGCTGC  51 85
CL52_RS16280 NONE
CL52_RS16285 NONE
CL52_RS16290 NONE
CL52_RS16295 3510020 .. 3510052 + -14.2  -2.64155   CATTCACCCCAAAAA     CAAGCCCGTCC-CCG TTCG CGCTGGACGGGCTTG      TGCGTTTCAGGAGCG  74 46
CL52_RS16300 3510300 .. 3510318 +  -4.4  -2.73364   TTTGATTCGGCCGCC             GGGGCTTG AAC CATGGCCC             TGATTGGCATGAGCC  42 17
CL52_RS16305 NONE
CL52_RS16310 NONE
CL52_RS16315 3512518 .. 3512541 +  -3.1  -3.05963   GGTGATCCGCATGGT          GCTGATCGTG AGCAA CACGG-CGGC          TGTTCAACTGAAGAT  43 402
CL52_RS21550 3513218 .. 3513234 +  -2.1  -2.94924   TGCATCAAATACTGA              GGTCGCC CAT GACAACC              CTTTATCACTACCAC  40 26
CL52_RS16330 3514005 .. 3514023 + -11.7  -4.98531   CACCTATCCCTTCCG             GCCCACC CCTGC GGTGGGC             TTTTTACTTTCCGGA 100 55
CL52_RS16335 NONE
CL52_RS16340 NONE
CL52_RS16345 NONE
CL52_RS16350 NONE
CL52_RS16355 NONE
CL52_RS16360 NONE
CL52_RS16365 3520755 .. 3520772 +  -9.8  -4.36596   CTTTTACCCCATCGA             CCCCGC CACTGT GCGGGG              TTTCTTGCTTCTGGA  85 51
CL52_RS16370 NONE
CL52_RS16375 NONE
CL52_RS16380 3522254 .. 3522292 +  -2.3  -4.34951   TGGCCGGTTGGAAGT   TGCTCGTAAGGGCCA AAAGTTACA TGGCCCGATTGAGCA   TTGTCTTTTTTTTGC  65 275
CL52_RS16400 NONE
CL52_RS16405 NONE
CL52_RS16410 3528664 .. 3528682 +  -4.4  -3.22491   CTCTTGCCAATCGAT             CTACGCGC TCG GCGCAAAG             TTAATAGTAGGGTTT  47 3
CL52_RS16415 3529408 .. 3529437 +  -6.3  -2.60725   TTACCGCTGTCAGCA       TCG-CCCGGCGGCC AAT GGCTGCCCGGACAA       CTTCGTGTGCTTTCG  48 120
CL52_RS16425 3532500 .. 3532520 +  -9.8  -3.72695   CTGAGGCCGGAGAAA            GGGGAAAT CTGAC ATTTCCCC            TTTGCTAGCAAGGCT  74 44
CL52_RS16430 NONE
CL52_RS20865 3534980 .. 3534992 +  -6.2  -2.52464   GCAACAAACAGGTCA                GGCC ATAGC GGCC                TGACTTAAACGAAAC  45 10
CL52_RS16450 3537650 .. 3537674 + -14.4  -2.70932   ATTCGCCACTCCAAT          TGGCGCAGTT CAGAA AACTGCGCCA          TAATTGCGCCAACAG  75 319
CL52_RS16455 NONE
CL52_RS20870 NONE
CL52_RS16460 3540522 .. 3540549 +   -17  -5.27335   TCCACCAAATACGAA        GCCCCGAGACTC GAAA GAGCCTCGGGGC         TTTTTCTTTGCCGGA 100 377
CL52_RS16515 NONE
CL52_RS16520 3559455 .. 3559467 +  -6.2  -3.14931   CGCGCGACACCTCTT                CGGC GGCGA GCCG                TTGCTGACCCGTGGC  51 212
CL52_RS16535 3564905 .. 3564928 +   -11  -5.40072   CCAGGCGGTGTCTTT          GCCCCGGCTCT GGC AG-GTCGGGGC          TTTTTTTCCGGAGAA 100 103
CL52_RS16540 NONE
        malE 3567206 .. 3567237 +    -8  -3.61398   CTCCGCCGCGAACGC      GCGGCGCAGC CGGAGGGTGGGA GCTGCGCTGC       TTCTTCCGCCAGCCA  62 74
CL52_RS16575 3574312 .. 3574346 + -12.1  -3.14132   ACCAATGGCAGGCCG    GCCTCGGT-CAGCGCC ACCA GGCGCTGCGCCAGGGC     TTGATCAGACGGCGA  70 512
CL52_RS16620 NONE
CL52_RS16625 NONE
CL52_RS16630 3581338 .. 3581386 + -11.4  -5.00196   GCTCGCCCTTCTGCC GGCGCAGGGCTGAGCCTGGCGC TCGTC GCGCCGCGCGCCGCTCGGCCCC TTTTATTGTTTCCGG 100 13
        nirJ NONE
        cobA NONE
CL52_RS16645 3585112 .. 3585143 +  -7.8  -2.59683   CGGCCACGCCGCTGC      ACCCG-GCCGGCCCG TTG CGGGCCAGCACCGGC      CTTGTCCGCTACAAT  51 64
CL52_RS16650 3586487 .. 3586511 +  -7.7  -3.41013   CGCGGCGGTGACCTC          GCCCATGCTGC GGC GCAGCGCGTGC          TTCTCGGTCTGCTTG  59 464
CL52_RS16730 3603617 .. 3603634 +  -9.1  -3.53012   GCAAGTCGTAGAGCG             CGC-CGGG TAA CCCGAGCG             TTTGCAGCGAAGGGA  65 30
CL52_RS16740 NONE
CL52_RS16745 NONE
CL52_RS16750 3610031 .. 3610054 +  -8.8  -2.58249   GCCGAGGCGCTTGCC          CAGCAGCCGG CTGC TCGGGTGCTG           CTTGTAGAGGCTCTC  53 84
CL52_RS21160 NONE
        phhA 3612675 .. 3612718 +  -4.4  -3.91911   AGCGAGGCGGAGCGA ACCCGACGCGTGGACAA-GCC TGC GGCGTTGTCCACCCTACGGCC TTTCATTCGCCTAGG  58 147
CL52_RS16765 NONE
CL52_RS16770 3614640 .. 3614650 +  -3.2  -3.05596   CCGTCCGCCGCGCCG                 CTGT CGA GCAG                 TTCGGTCAGCCGCTG  42 339
CL52_RS16780 NONE
CL52_RS16785 NONE
CL52_RS16790 NONE
CL52_RS16795 3619921 .. 3619942 + -11.5  -3.30124   CAGCAGCGCGTCGGC           CGCGGCCTC CGAA GAGGCCGGG            TTCTGCCCGGTCACC  68 62
CL52_RS16850 3635844 .. 3635857 +  -9.5   -3.2964   CTGCCGCTGGATTGA               GCGGC CGCT GCCGC                TTGTAGGAAAGATTT  63 26
CL52_RS16855 3638099 .. 3638121 +  -4.6  -3.44284   GGCGTCGTCGATGAA           CGCCGCCGAC AGC GGCAACGGCG           TGTTCTTCATCCACA  51 222
CL52_RS16865 NONE
CL52_RS16870 3641481 .. 3641519 + -12.4  -3.23216   CGCACCGCACCGGGG  CC-GGTGCGCCGGTCGC CGCCGC GCAACCGGCGCAGCAGG   TTGATGATGCTCGCC  71 252
CL52_RS16880 NONE
CL52_RS16885 3645204 .. 3645214 +  -6.8  -4.19238   CGTAGGGTGGAAAAC                 GTGC GCA GCAC                 TTTTCCACTTAAGCC  69 44
CL52_RS16910 NONE
CL52_RS16915 NONE
CL52_RS16920 NONE
CL52_RS16925 3651446 .. 3651464 +    -3  -3.14564   AAAGACCATGCCCCA             CGCTCGGA GAT TCAGACCG             TTCATCGGGAAATGC  44 288
CL52_RS16935 3652921 .. 3652936 + -10.4  -3.85698   GGGGCCGGCGTACAA              GGGCCA TCCT TGGCCC               TTTATCGCGGGGACG  76 348
CL52_RS16940 NONE
CL52_RS16945 NONE
CL52_RS16950 3659949 .. 3659961 +  -4.8  -2.90392   GTGCGCGGGAGGTCT                GAGC ATGGC GCTC                TATCCTTCGGGCATC  46 24
CL52_RS16955 NONE
CL52_RS16960 NONE
        cynS NONE
        codA 3664170 .. 3664182 +  -6.2  -4.25104   CGCGCTCATGATCCG                GGCG ATGCG CGCC                TTTTCGTCGGCAGCG  70 46
CL52_RS16980 NONE
CL52_RS16985 3666028 .. 3666058 + -20.5  -3.55444   GCCACACGCGCCATA      C-CGACCGCCCGGC ACCT GCCGGGCGGTCGCG       TTTCCAGCCTCGCCC 100 41
CL52_RS16990 NONE
CL52_RS16995 3668010 .. 3668044 +  -9.2  -3.03124   CGCTGAGGCCGTGCC    GAG-AGGCCGGCGGC GCAACG GCCGCCGGCCTGCAA     TCTTCGGCCGTGGCG  60 35
CL52_RS17000 3669012 .. 3669041 +  -4.9  -3.21924   GTTGCACATTTGCCT       GATCGATC-GGCGA ACC TCGCCCGCCCGGTC       TCTTCTAAGCACTAC  48 65
CL52_RS17005 3669767 .. 3669793 +  -6.6  -3.53444   TCATCTTCACGTCAT        CCTCGCGCAGGC ACGAC GCC-GCGC-AGG        TTTCGCAAGCCATGG  56 334
CL52_RS17015 3670710 .. 3670723 +  -3.7   -5.0133   AGCCGGCGCGGCTTC               CGGCC AACT GGCCA                TTTTTTGCGCAAATG  81 83
CL52_RS17020 3672035 .. 3672052 +  -5.5  -2.78384   ACCCTGGTCAAGCCT             GGCCG CCCGCAAC CGGCC              TATGGTGGCGGGCGG  46 57
CL52_RS21380 3672341 .. 3672351 +  -8.2  -3.28712   TCGCGGCCATAGGCA                 CGGC GGT GCCG                 TTGTGCAGCGCACCG  58 114
CL52_RS17030 3674495 .. 3674538 +  -8.1  -3.28712   CCGTTCGGTTGCGTC CGACGATTGTCGACCTTGCC CCCCT GGCAAGGTCAACTG-CGCCG TTATGCCACCCGGGG  60 261
CL52_RS17040 NONE
        cueR 3677730 .. 3677743 +  -8.1  -2.82623   AGGGGCTGCGTCAGG               CCTGC GACT GCAGG                TAGTTCTGCAGGCCG  54 332
CL52_RS17060 3679625 .. 3679639 +  -7.1  -2.78935   CGATCCGCCCTTCGA               TGCGC CCGCC GCGCA               TGTCGTCGAAGATCT  48 85
CL52_RS17075 3684480 .. 3684508 + -12.4  -2.91264   GCGGCCCGTTCGTCT        GGCGCGGGCG GGAGTGGTA CGCTCGCGCC        TCTGTCGATACCGGG  67 59
CL52_RS17080 NONE
CL52_RS17085 NONE
CL52_RS17090 NONE
CL52_RS17095 3688026 .. 3688042 +  -4.3  -3.34233   GCTTGCCGGCCTTGG              TCGCCAG GTA CTTGCGG              TTGTAGGGGTTGTGC  49 501
CL52_RS17155 NONE
CL52_RS17160 3696819 .. 3696845 +  -3.5  -3.39784   GCCCGCCGCGCAGAG         GCGGCAGCATG AACGA CCCGCTGCGGC         TGTTCTTCGCCCTGC  49 14
        thpR 3697594 .. 3697618 +  -2.7   -4.2803   CAAGCGAGAGATCGG          GTACCTGGCTC ATC GAGCGAGCTCC          TTTTCGGTTGGAATC  63 256
        trxA 3700167 .. 3700185 +  -5.9  -3.62572   TTCGATGGCAAGGTC             GACCGGC CAATC GCCGATC             TTTCCGCTGATCCTG  59 335
CL52_RS17190 NONE
CL52_RS17195 NONE
CL52_RS17200 NONE
CL52_RS17205 3703679 .. 3703725 + -15.9  -3.33696   CGCTGTGCTGCGCTC GCGCG-CCTGCCACCAGA-GCTG CGC CAGCCTCTCGCGGCGGGTCGCGC TTCCTTGCAACAGAC  80 277
CL52_RS17240 3709228 .. 3709243 + -11.8  -4.32607   CCCAGACAGCAGAAA              GGCGCC CATC GGCGCC               TTTCTTGCGTTTTCA  91 54
        uvrA 3716104 .. 3716123 +   -15  -5.84381   TCGGCGCATAAAAAA            GCCCGCAG CACG CTGCGGGC             TTTTTTTGTTCCTCA 100 47
CL52_RS17540 NONE
CL52_RS17545 3761774 .. 3761795 + -12.9   -4.2528   ATCCGGCATAAAAAA           GCCGCGCCC AGCA GAGCGCGGC            TTTCTTCCGTTCGGC  95 30
        hemJ NONE
CL52_RS17565 3764841 .. 3764867 +  -4.3  -2.78816   CCATGACCGTACGCC         CCGCGGCCC ACGCGCGCA GGGCTGCGA         TCTCCTCGGCCATCA  42 54
CL52_RS17575 NONE
        coq7 3767433 .. 3767452 + -13.6   -4.4078   GCTAGCAAAAAAAAA            GACCACGC CTAG GCGTGGTC             TTTTACTTCGAGGGG 100 44
CL52_RS17585 3768266 .. 3768276 +  -2.4  -3.21276   TCCGCGCCCTTCTGC                 GCCG GTC CGCC                 TGTTATCGACCGGCC  43 90
CL52_RS17590 3768802 .. 3768823 + -11.5  -2.79312   TCCAACCAGCGGACG           CACCTGCCG GCTG CGGCAGGCG            TATACTGCCCCGTTT  63 91
CL52_RS17595 3769272 .. 3769306 +  -7.2  -3.01712   GCGATTGCGCCCTTC    GCGAATC-ACCAGCT CTAGCC AGCTGGTCGGTACGC     TCTTGCGAAAGCGCA  51 188
        urtA 3771333 .. 3771347 +  -4.2  -3.60296   GGTCGTCATGGTGGA               TGGGTG ACG CACCGA               TTTCGCGTCCCGATC  53 48
        urtB NONE
        urtC NONE
        urtD 3775122 .. 3775177 +  -4.8  -3.28712   AGCAAAAAGGTGGAT GGCTTCGGC--CATCCACCCTACG CCCGTCGAAT CGTAGGGTGGATAACGCCGCAGGC TTATCCACCGAAAGC  50 40
        urtE 3775970 .. 3776014 +  -7.1  -3.05384   ACGGGGGCGCCTGAT CGGTGTCAATCTCCGGTTC TCCCGCC GGGCCGATGATTGACAGCG TTGGCTCCAGCAGGG  51 59
        mgtA 3779586 .. 3779602 +    -3  -3.53091   GGTTCGCGGCAACCC             TGA-GCG CCGA CGCCTCA              TTTCGGGGCACCGCT  49 23
CL52_RS17635 3780674 .. 3780697 +  -2.2  -4.08767   GCACTATCTGGTAAT          CGTAGGGTGG AAAA CCGCGCAGCG           TTTTCCACCGATACG  57 99
        ureA NONE
CL52_RS17645 NONE
CL52_RS17650 3781932 .. 3781950 +  -4.5  -4.26903   GGGCGGATAATGGGC             GCGCTCT AGGGC ACAGCGC             TTTTCGTAGGGTGGA  66 17
        ureC 3783717 .. 3783729 +  -5.5  -3.97088   CCGAGGTGCTGCCGA                TGGCG CAG CGCTA                TTTCCTGTTCTGACC  65 0
CL52_RS17665 3785481 .. 3785503 +    -9  -4.26076   CCTCCACGCCGACCA           CGCAGATGCC GTC GGCACCGGCG           TTTTCATAGGCCTGC  80 339
CL52_RS17680 3787900 .. 3787916 + -12.3  -3.32022   TTGGCGGGCGCTGCG              GCGGCTT GGC AAGCCGC              TTGCTGTATCACCGG  72 143
        ureE NONE
CL52_RS17690 3789389 .. 3789407 +   -16   -3.3782   CGCCCCTGCATCCAG             CCCTGCGC TAC GCGCAGGG             TTCGTTCACTCCCTC  88 283
        ureG 3790990 .. 3791011 +  -2.1  -3.14931   GCGCGGCTATAGGCA           CCGCGCCACC GTG GG-GGCGAGC           TTGCTCGCCAATAGC  43 102
CL52_RS17700 NONE
CL52_RS21180 3792174 .. 3792210 +  -2.7  -3.09671   CCACAACGCGCGGGA    GGTGCACGCATGAAGCG CAT CGCCACCTGCCTGAGCC    TGTTGACATTCGCCT  41 13
CL52_RS17710 3794508 .. 3794523 + -10.4  -3.70902   AGGCGGTAGCCCTGA              GCGGCA ATGG TGCCGC               TTTCCATGTCCACCG  70 281
CL52_RS17780 NONE
        thiE 3817980 .. 3818003 + -13.8  -4.07568   AACCCATCTGACCAT          CCGCGGCGGT CGTC ACCGCCGCTG           TTTTCCGCGAGGCCC  90 30
        hemL NONE
CL52_RS17795 3819938 .. 3819949 +  -5.8  -3.38768   CGAAAGGCTTTGTAA                GCTG TCGG CAGC                 TTATCCATAATGTGA  52 50
CL52_RS17800 3820570 .. 3820584 +  -3.5  -3.57462   CGCCCTGACGGCCAG              GCGACG ATCG CG-CGC               TTTCCCCCTCCCCTG  51 33
        miaB 3822026 .. 3822056 +  -7.5  -3.56378   CCGGGGACCGAACAA      GCGCCAGCTTTCGGC TTT GCCGCG-GC-GGCGC      TATTCTCTTTTCACC  62 89
CL52_RS17810 NONE
        ybeY NONE
CL52_RS17820 3824456 .. 3824466 +  -2.4  -3.85698   ACTGAGCGACCGCGG                 GCCG TGG CGGG                 TTTCTACCGCCACGC  54 36
         lnt 3826239 .. 3826258 +    -7  -3.40403   TGAACCCCACCGGTG            CGGCGACG ACCT CGATGCCG             TTCTGCTCGAAGCAC  56 175
        leuS NONE
        lptE 3830878 .. 3830906 + -16.8  -3.61178   CCGCTGCAGTGAAGC       CG-GAGGAGCCGC CGCC GCGGCTCCTCTCG        TTTGCCGTCAATGAA  91 29
        holA NONE
CL52_RS17855 3833354 .. 3833370 + -15.1  -4.55128   CACGGCAACGAAAAA              GCCCCGG AAT CCGGGGC              TTTTCATTTGACGCT 100 46
CL52_RS17925 3846578 .. 3846622 +  -3.4  -3.53444   GTGCGGTTTCGAACG GCAGCAGGTAGGCC-AGTTTG CTCG CCAGCTCGGCCTGCCCGCGGA TTTCGCCCGGCATGC  49 142
CL52_RS17945 3848784 .. 3848802 +  -7.3  -3.56092   TGAGCGTCACCCATG             GCGCTGG CGCGT CCTGCGC             TTTGCGGCATACTCA  62 38
CL52_RS17950 NONE
CL52_RS17955 3851568 .. 3851584 + -11.5  -3.07043   TTGCGTCAGGCCGGA              CCCGCCG TGC TGGCGGG              TATTCCACTCATCCA  65 412
        rsgA 3853891 .. 3853934 +  -8.1  -3.04461   CACCGGCGGGCGCGG GGCCGTCCGGTGCCGGCG CCCCCCCCT CCTCGCCACCGGA-GGCC TGTTCGCCCTCGATG  53 164
CL52_RS17985 3857294 .. 3857314 +  -3.1  -4.66609   GGCGATGGTCAATTT            CGCCAAGCG CAG TGCCTGACG            TTTTTCGCTAGACTG  69 7
CL52_RS17990 NONE
         asd NONE
CL52_RS18000 3861038 .. 3861056 +  -6.6  -4.16943   CGTCTTTTTCCCGCC             CCGCACCG CTT CGGTGTGC             TTTTAAGCTGTCGCC  69 53
CL52_RS18005 NONE
CL52_RS18010 3864325 .. 3864341 +  -9.3  -3.05715   GCCCGGTCGGCGAGG              AGCCGGG CTG CCCGGCC              TTCACTCCAGGCCTT  60 50
CL52_RS18020 3867752 .. 3867766 +  -5.6  -3.16668   CAGCTGGGTAGCCAG               CTGCCG CAT CAGCAG               TTGGTCGACGTCTTC  49 499
CL52_RS18070 3877467 .. 3877478 +  -3.6  -3.89346   CAGCTCAAGGGCATC                CTGC GCGA GCGG                 TTTCTGCCCTGACCC  56 2
CL52_RS18080 3881647 .. 3881689 +  -3.3  -3.29461   GTTGAACAGGTGCGG CCCGCTGAGCACTGGC-TTGC CCA GCGCCGCCGGTTC-CAGCAGG TTGTGCCCCCCGTTG  46 353
CL52_RS18090 3883149 .. 3883174 +  -6.1  -3.73775   CCACTAAGCTGCTGG         CGGAC-TGCAGT TAT ACTGCGCGACCG         TTTCCTCCAGATGAG  60 34
CL52_RS18095 NONE
CL52_RS18100 NONE
CL52_RS18105 3886267 .. 3886306 +    -5  -3.01712   ACCACCTTTGACCAG CACATCGGGGCGGACCTG GCCGAG CAG--CCGCTCCGGGGTG  TCTTCGGCGAAACAG  45 182
CL52_RS18130 NONE
        aceE NONE
        aceF 3914922 .. 3914941 +   -15  -5.52384   CTCGCGCAAAAAGAA            GACCCGCC AACT GGCGGGTC             TTTTTTTGCTCGCGG 100 47
CL52_RS18225 3918281 .. 3918297 +  -2.9  -3.57144   CACCGCGCGACATCC              GCCGG TCCGCAT TCGGC              TTTCACCGTCGCGCC  51 41
        msrA 3919085 .. 3919099 +  -8.5  -4.05902   CGACATCCGTGATCT               GCGCC TCCAT GGCGC               TTTCCTTCTGGTTTC  73 108
CL52_RS18280 3930372 .. 3930394 +    -4  -2.82516   ACTGCCTGGCCCGAA           CGCCCAAGCC GGG GGATTGAGTG           TGTCGTCGTGCACGG  42 6
CL52_RS18285 3931886 .. 3931903 +  -4.7  -3.33815   CACGCCGATGGTCTG             GCGCATG CGGC CGAGCGC              TTCCTTGAGCGCCGT  49 463
CL52_RS18295 3933943 .. 3933959 +  -2.1  -3.14132   CAAAGGCTTCGGCCA              CCAGCCG CTG CCGCTGA              TTGGTCGCCCGCGCC  42 340
CL52_RS18305 3936631 .. 3936650 + -16.4   -5.1287   GCTCTCCACCCGAAG            CGCCCCGC CGAT GCGGGGCG             TTTTTTGACTGTCCG 100 50
CL52_RS18310 3938515 .. 3938567 + -12.8  -2.72344   TGAACCAACCGGATT GCGGTTGATCTTACGGGCTCGCGCTG CCC CGGCGC-AGCCCGTAGACTC-ATCGC TCGTTCGACCTCCCA  68 38
        mscK NONE
CL52_RS18320 3943444 .. 3943456 +  -3.3  -3.61398   GATCAGCTGCTCATC                CTGAC TGT GCCAG                TTGTTGCGCAACCGA  51 22
CL52_RS18325 3944244 .. 3944275 + -21.6  -3.57144   GATCGTCTGACCCGC      GCCGCGTCACCGGG CCCG TCCGGTGGCGCGGC       TTTGCCGCTGGCCGG 100 31
CL52_RS18365 3952828 .. 3952843 +  -8.2  -5.60993   CGTCCACTGACACGG              GCCGGC TGAC GTCGGC               TTTTTTTCTGCCCAG 100 45
CL52_RS18370 3953831 .. 3953848 +  -6.2   -3.1876   TGCGCGGCAGCGGTT             GGCCCG GTGCAG CGGGTC              TTCCTGCATGAGCTT  51 61
        rarD 3957306 .. 3957364 +  -9.6  -3.11687   TCGAGGCGCTGCTGC -AGCTGATCCAGCGCCAGC-CCCGGC-GGC ACC GCCAGCCGGGCGTCGGCG-TGGAACAGCAG TTCGCTGCTCATTGG  59 70
CL52_RS18395 3960142 .. 3960157 + -11.8  -5.60993   CCGCTGCAGAAAGAA              CCGCCC TTCG GGGCGG               TTTTTTTATGGGCCG 100 50
CL52_RS18400 NONE
CL52_RS18405 3963350 .. 3963370 +  -4.6  -4.25104   AACAGTAGCGTCCAG            GGGCGCCA CAACA TGCTGCCC            TTTTCCTCGGCGACC  66 445
        dbpA NONE
CL52_RS18435 3969802 .. 3969847 + -13.9  -2.62616   TCGTGCATCCATACC GCGCCG-CGGCCATAGCCGGCG CGG CCCTGGCTGTCGACGCCGGCGC TGGTGTCGACGATGA  69 426
        yccS NONE
CL52_RS18450 3974740 .. 3974757 +  -8.3  -3.15996   GGCCGCGAAAGCTCG             CGGCCGC GTCG GCGCCCG              TCTTACTGGCTGCTG  58 267
CL52_RS18485 3979859 .. 3979885 + -13.7  -4.50976   CGGTTTCCGAAAAAA         AGAAGGCCCGC ATCGA GCGGGCCTTCC         TTTTATCCTCTGCGA 100 86
CL52_RS18525 NONE
CL52_RS18530 3988816 .. 3988845 + -16.7  -3.21099   GCTGCAGTGCGGCAA       GGCCAATATCAAA ACTT TTTGATATTGGCC        TTGCTGGTCGAAAAA  86 45
CL52_RS18535 NONE
        metK 3991283 .. 3991309 +  -7.9  -4.74504   CAAGCTGCAAGAAAA        GCCCCG-CCGGC GAAG GTCGTACGGGGC         TTTTTGCATTCCGCT  86 217
CL52_RS18545 3993333 .. 3993370 +  -7.7  -3.48036   CATGCCGACAGGCCC   CGGGAGAAAAAGCGATG AGAG CACCGCTGTTTGTCCTG    TTCCTTCTGCTGCTC  60 8
CL52_RS18550 3994009 .. 3994034 + -12.5  -3.04122   CGACGGAATGAAAAA         GCCCCGAC-GGC AAT GCCGGACGGGGC         TCCTTTATCCTGGCG  71 49
CL52_RS18570 NONE
        ligB NONE
CL52_RS18580 4000233 .. 4000251 +  -2.2  -3.25093   CTTCTGCCAGACCTC             GTCGCGCG CGT CGCTCTGC             TCTTCCTTGACCTGT  44 196
        ahcY 4002830 .. 4002854 + -14.2  -3.92324   GACGACCAGTGCACT          GCGCTGGCGG CCGTC CCGCCTGCGC          TTTCGTCTTGCGCGA  89 152
        metF 4003983 .. 4004000 +  -4.1  -2.95652   CCAAGCCCTCTACAA             GACAGGA TCTC TCATGTC              CTTTGCTTCCCTCGG  44 240
CL52_RS18605 4005824 .. 4005841 + -10.5  -5.86332   CGACGAGACGAAAAA             GCCGCCT GCAA GGGCGGC              TTTTTTTTAGGTTCA 100 42
CL52_RS18640 NONE
CL52_RS18645 NONE
        gshB NONE
CL52_RS18695 NONE
CL52_RS18700 NONE
        ruvX NONE
        pyrR NONE
CL52_RS18715 NONE
CL52_RS18720 4035786 .. 4035816 + -16.3  -5.00616   TCTACCAGGCGTGAC      GCAAAAGGCCGGAG CCCG CTCCGGCCTTT-GC       TTTTTTCAGAGCCCG 100 27
CL52_RS18730 NONE
CL52_RS18735 4038819 .. 4038831 +  -6.2  -3.65046   GATGATGCGGTCCAG                CGCC TGGTT GGCG                TTGTTGGCATGCAGC  59 429
CL52_RS18750 NONE
        proC NONE
CL52_RS18760 4042954 .. 4043006 +    -7  -3.53012   GCTGCGGCCGGGCCT CGCAGCGG-GCGCGCGGCCTGGCGA ACAGAA TCGCCA--CCGCGCGAGCCACTCCG TTTCCAACACGGCAG  57 134
CL52_RS18765 4044979 .. 4045012 +  -2.3  -3.28765   CCTCGGCCAAGCCGA     GCGGGCCGGCGATACA GGA TGAATTGAC-GCGCGC     TTCCCTTTAGACTCT  45 4
CL52_RS18770 NONE
        metW 4046797 .. 4046813 + -11.5  -3.53012   CCGCGTCATCGGACC              TGGCCGC TGA GCGGCCG              TTTGGACAGGAGAAC  71 16
CL52_RS18780 NONE
        rdgB NONE
        hemW NONE
CL52_RS18795 4049643 .. 4049664 +  -5.8  -3.09516   GGCACTGCCGCCTCA           CCCTCGAC GTGGTA GTCGAGCG            TTAGCTGATAACCGG  49 324
        mtgA 4054635 .. 4054645 +  -8.2  -4.11216   GGCCTTCATGAAGTA                 CCGG TGA CCGG                 TTTTGAAGATGAACA  76 138
CL52_RS18835 NONE
CL52_RS18840 4059309 .. 4059337 + -21.8  -3.47227   CCACGGAAACGAAAA        CGCGGAGCCTGC ACAGG GCAGGCTCCGCG        TTCTGGTCGTTGCCG 100 61
CL52_RS18865 NONE
CL52_RS18870 NONE
        rsmD 4067206 .. 4067240 +  -6.3  -3.28712   GTTGCGACTCGGCCA    GCAGCACGGCGAAGCT CTCC AGCTCCTCCG-GCAGC     TTGTCCACGCAGAGC  53 216
CL52_RS18885 4068658 .. 4068672 +  -4.9  -3.53012   CGCCCCGCGCCGACT               CCGTG ACGAA CGCGG               TTTCCAGCGCCAGCA  52 66
CL52_RS18895 NONE
CL52_RS18900 NONE
CL52_RS18905 NONE
        coaD 4073521 .. 4073568 +  -3.8  -3.73982   TCGGTCAGCGCTGAT CGACGCGCCCGTGCACGGCGGG CGCG CTTGCGGCACAATTGCGCGTCG TTCTATTGCTGTGCC  56 27
CL52_RS18915 NONE
         ggt 4076074 .. 4076090 +  -3.5  -3.32993   CCATGAAGGCCAGCA              GGTCGCC GTA GACGCCC              TTGATGTGTCGCTGG  47 518
CL52_RS18945 4080357 .. 4080400 +   -21  -2.92613   GCTAGCGGCCGAGGC GAGCAGGCGACTGCGGCGAT TCCG ACCGGCGCAGTCGCCTGCGC TCGTTTAGAATGCCC  93 36
CL52_RS18950 4081691 .. 4081710 + -12.2  -2.71144   CCTGCGGCACGAGCT            GCTCGATC GCCT GATCGAGC             TGCTTCAGACACATG  65 82
        ilvD 4084115 .. 4084137 + -16.3  -4.05788   GCCGTCCTGCCTGAA           CAGCCCGGC CTCGC GCCGGGCTG           TTTCGTTTCGGCCGG 100 45
CL52_RS18965 4085892 .. 4085913 +  -3.5  -2.62184   TCGCGCAGGCTGCTG           ACCAGGTGC TCCT GCGCCGGGC            TGCTGTGCCGACGGC  40 328
        yrfG 4087824 .. 4087839 +  -6.8  -3.17075   AGATGACTGGCGGGT              CGTTCG ACAA CGGACG               TTCGATTGACACCGC  53 86
CL52_RS18985 4090524 .. 4090572 +  -6.6  -3.55563   TCGCCGGGCGCGGAA CGTTCGCCGGCAGCCCGGGTTCA CAAT TGAACCCGTGCC-CTGTCTGACG TTTACGCCATGAGAT  59 59
        fdhD 4091456 .. 4091467 +  -4.4  -3.19449   CCTCTGACCGCTTCG                CTTG CGAC CAAG                 TTCCTCAACTATTTC  47 67
CL52_RS18995 4092068 .. 4092095 + -14.9  -5.37593   TCAACCGCCTGTCGA        GGGCCGGCCAGC ACTGC GCTG-CCGGCCC        TTTTTTCGTTTCAGG 100 44
CL52_RS19020 4097969 .. 4098006 +  -6.1   -3.5882   AGCTGGCCGAGGAAC   AGGCCTAGCGCAAGCGCC AAG GGCA-TGGCGCAAGGCCA   TTTACCACTCGTCTC  57 18
CL52_RS19030 NONE
CL52_RS19035 4099305 .. 4099318 +  -9.5  -5.25803   CCGGAAAGCAAAAAA               CCCGC CGAG GCGGG                TTTTTTCTGACCATT 100 49
CL52_RS19040 4100215 .. 4100270 +  -6.8  -2.53876   TCCCGAGCCGGGGCA GTAGC-CCGAAAACGGCAAGGCCCGCC ATCAC GGCGGGCCTTGCCGGCG-CGCTGC-AC TCACTTGGCGTGCGA  48 22
CL52_RS19050 NONE
CL52_RS19055 NONE
CL52_RS19060 NONE
CL52_RS19065 4107184 .. 4107229 +  -8.1  -2.87211   ATCCGCGTGCGACTG TCTGCGGTGGCCACCGGATCG CCGC CGATCCGCTTGCCGGCGAAGC TCTGTGGCGGCAGAT  52 126
CL52_RS19075 4111076 .. 4111113 +  -9.1  -2.58861   GTCTGCGCCATCAGC   CCGCAGCTGC-GCATGAC CTC GTCACGCTGGACCTGCGG   CTTGTCGCGGTAGTA  54 307
CL52_RS19100 NONE
        rimK 4116589 .. 4116613 +  -4.3  -2.82623   CGGCATCGGCTGCAC         GCAGAGACGG ATGCGC TCG-CTCTGC          TGATTGTAGGGCGCC  44 429
CL52_RS19125 NONE
CL52_RS19130 4120684 .. 4120700 +    -5  -2.78816   TCCCCCGCGGAAGGA              GCAGCC ATGAC GGCCGC              TGTAGTACAGGCTCA  44 16
        bcsG NONE
        bcsR NONE
        bcsQ NONE
        bcsA NONE
        bcsB NONE
        bcsC 4131647 .. 4131660 +  -9.5  -3.72576   TACTGCCGCCCTTTC               CGGCC GGAC GGCCG                TTTCATCCCCGCCAG  71 90
CL52_RS19165 NONE
CL52_RS19170 4134404 .. 4134420 + -10.8   -5.2291   GTAATACCGGCCGAA              GCGCGG CAACC CCGCGC              TTTTTCTTGTCGTCT 100 37
        gshA 4136108 .. 4136130 +  -8.3  -4.86731   TGCGCGGTAGAGATC           AGCGGTCGC CAGGT GCGGCCGCC           TTTTCTTTGGCGCCG  90 59
CL52_RS19200 4142458 .. 4142473 +  -3.9  -2.62184   CCGGCCACCGCCCTT              CCGGT AGGGTC GCCGG               TGCTGTCCCGCCCGA  41 69
CL52_RS19205 4144750 .. 4144781 +   -13  -2.57463   ATGCTGGACTGGTGG      CTGCCGACGCGGTT GGAA AAGCGCGTCGCCAG       GTTCTCACCGGACTT  67 486
CL52_RS19215 NONE
CL52_RS19220 4151070 .. 4151086 +  -5.7  -3.05935   GCTGAGCGTCCCGGC              ACGCCGG AAC TCGGCGG              TTCGCTGCGCACTCT  49 36
CL52_RS19225 4151451 .. 4151468 + -14.1  -4.56597   CCCACGTTGACCCAC             GGCCCGC TGAT GCGGGCC              TTTTTCCAGAGGAGG 100 31
CL52_RS19230 4151947 .. 4151970 + -19.6  -3.88232   AGCGCAAAAAAGAAA          CGCCACCGCG TTGC CGCGGTGGCG           TTCTTGTGTCGCCCG 100 59
CL52_RS19240 NONE
CL52_RS19245 4155312 .. 4155331 +   -15  -4.21922   CAACTGAGCCCACAA            CGCCCGTC ACCC GACGGGCG             TTTCATTTTCCGTAC 100 34
CL52_RS19250 NONE
CL52_RS19255 4156784 .. 4156802 + -13.1  -3.65317   GAAAGCGTGCTCAAA             GCCCCGC CATGT GCGGGGC             TTGTCGTTTCTAGGT  77 73
CL52_RS19260 4158006 .. 4158032 +  -9.4   -4.2704   GGAGGCTGTTTCGTT         TAAGTCAGGCCG CTA TGGCCTGACCTG         TTTGTTGCTGGTGGA  83 23
CL52_RS19280 4160049 .. 4160064 +  -3.2  -3.65902   CGAGCAACGCTGTCT              G-CCGGC GTA GCTGGGC              TTTCGGTCACGTCAG  51 136
CL52_RS19295 4163110 .. 4163126 +  -3.6  -3.86897   ATTTCGAGAGCCCCC              CTGGTC AGCAA GGCCGG              TTTGTCGAACATCCG  57 119
CL52_RS19300 4165046 .. 4165070 +  -2.8  -3.72576   CGCCGGTCGGCCAGG          GCGAACAC CTTTTCGTA GAGTTCGC          TTTCCTCGAAGGCCA  53 183
CL52_RS19315 NONE
CL52_RS19320 NONE
CL52_RS19325 NONE
CL52_RS19330 4170489 .. 4170509 + -10.4  -2.78384   GCAGGCCGTCATAGG           CCGC-CGGG ATCA CCCGCGCGG            TGTAGTGCGCCGCCG  57 103
CL52_RS19345 NONE
CL52_RS19350 4175783 .. 4175795 +  -3.3  -3.28924   CATCGACCAGGCCCG                GTTGC CGA GCGGC                TTGTAGGGCACGGTG  46 378
CL52_RS19405 NONE
CL52_RS19410 4191784 .. 4191820 +  -5.1  -3.51232   GCCGCCTGCACCTGG   CGGCGCCTGGCCGTCCA ACCAG TAGTCGGCCAG-C-CCG   TTCATTTCCACGCCG  54 154
CL52_RS19420 NONE
CL52_RS19425 4194687 .. 4194714 + -13.4  -3.15861   AGCGCACCCAGTCCT        CG-GCCTGCCCGA GGG TCGGGCTGGCGCG        TTCCTGGCGCTCCTG  72 383
CL52_RS19435 4196796 .. 4196826 + -12.5  -3.05384   ACGCGCCGGGCTGCA      GCCGGGCCG-CCGC TCGC GCGGCCCGCTCGGC       TTGGCTCCGGCCAGG  71 57
CL52_RS19440 4198133 .. 4198159 +  -2.2   -4.2828   ACCGACGGGTGGGTA        CGCAGGTGGTC GAGCTG GGCCACCA-CG         TTTTCCTCGGTGAGG  62 214
CL52_RS19475 4205813 .. 4205848 + -15.4  -3.08015   GCTTCACCGTCTTGG    GCGACAGGCGCAGGCT GCGC AGGCTGCGCTTGACGC     TCTTGAGGTGGTTGA  78 364
         zwf 4208399 .. 4208441 + -18.7  -3.29511   GAATCTACCGATGAA CTATGCCGTGAACTTCC GCCTGCACA GGAAGTTCACGGCGTAG TTCTCGCACGCTCAA  93 173
        ectA NONE
        ectB NONE
CL52_RS19505 NONE
        thpD NONE
CL52_RS19515 4213612 .. 4213640 + -19.5  -4.16943   TCGCTGTCGCACAGA        CGCCGGGCCCGGT AAT GCCGCGCCCGGCG        TTTTGCCGTCTGCCG 100 44
CL52_RS19520 4214052 .. 4214070 +  -6.6  -4.11216   CGCACTCGACGGCGT             TCGGCGGT AGA ATCGCCGC             TTTTCCGCCTCGCCG  69 101
        yegQ 4215587 .. 4215633 + -10.7  -2.58249   CAGCGCAGCAAGAGC GCTGCCGA-GGCCCCCGGCAGG CTGA CCTGCAGGCTGCCGTCGGCGCC ATTCTCGAAGCTCTC  59 144
CL52_RS19575 NONE
CL52_RS19580 NONE
CL52_RS19585 4226489 .. 4226513 + -17.1  -4.96501   GGCCGCGCCAGCAAA          CCCCTCCCGGC GCC GCCGCGAGGGG          TTTCTTTTTGTCCGC 100 48
CL52_RS19595 NONE
CL52_RS19600 4228880 .. 4228901 +  -2.1  -2.75074   GCCGTTCTGGCGCTA           GCTCGGCTC GCGT GGGCGGAAC            TAATCTTCCGGTAAC  39 25
CL52_RS19605 4229292 .. 4229337 +  -4.6  -3.67588   TCGCCCGTTGAGCCG CATGATCGCCGCGGTCGCAGCC CTTA GGCTG-G-CCGGGGCCGTCGGG TTTCGCTAGCCTTTG  55 30
CL52_RS19610 NONE
CL52_RS19615 4230015 .. 4230026 +  -5.8  -3.32343   CCAGCGACCTGCAGC                TGGC CGAA GCCA                 TTCTCGCCCTGTGAA  52 0
CL52_RS19620 NONE
CL52_RS19705 4255638 .. 4255663 +  -3.1  -3.14211   TGTCGAGCACGCGCC         G-AGCGGCGCTG AGG CGGCGGCGCAAC         TTCATCAACCGAGGT  44 14
CL52_RS19710 NONE
CL52_RS19715 4258444 .. 4258456 +  -4.7  -2.57244   TGTCTGGACGCGACG                GCACG CGA CGCGC                TGGGTTGATGACTCC  43 5
CL52_RS19720 4259833 .. 4259858 + -16.1  -3.40597   CTTGCGTGTCGCATA         CGGGGTGCTGC AATG GCCGCACCCCG          TGTTTGAATCGAAAC  89 79
CL52_RS19725 4261074 .. 4261087 +  -3.7  -2.71144   AAGCGCAGTCAAGGC               CAGGC GCGT GCCCG                TGGTTCACGGGCATC  42 39
        potA NONE
CL52_RS19735 NONE
CL52_RS19740 4264122 .. 4264151 + -15.8  -3.87815   GCGCACAGCTGATGG       CGCGACAGGGCA CTCGGC TGCCCTGTTGCG        TTTCTAGCGCTGCCA  91 29
CL52_RS19750 4265754 .. 4265777 +    -6  -3.43071   ATTTCGACTTCCTGC          GCGAACGGTTG CAG TAGCCGT-CGC          TTCCTTGATCTGAGG  55 9
CL52_RS19755 NONE
CL52_RS19760 4268812 .. 4268835 + -17.4  -4.57516   TGACCGAAACGAAAA          GGCCCGGGGC TTGC GCTCCGGGCC           TTTTGCTTTGCCTGT 100 53
        polA 4274709 .. 4274743 +  -7.3  -5.76949   GCGGTCCAGATTCGA     CCTCGAACTTC CCCCTCCCCCAAT GAAGTTCGAGG     TTTTTTTTGCCCGTA 100 194
        vgrG 4277251 .. 4277281 +  -9.1  -2.52676   ACGGCTTATGGCATG      GCGGC-GTGCATTTC GAC GAAG-GCACGGCCGC      TGCATTCGACCAGTC  56 213
CL52_RS21580 NONE
CL52_RS21195 4280414 .. 4280424 +  -2.4  -3.97947   CGCCCGACTATCTCG                 CCCG CTT CGGA                 TTTCTGGTCGATCCC  57 411
CL52_RS21585 NONE
CL52_RS20925 4283840 .. 4283856 +  -2.9  -3.35255   GTACCTGCGATTGCT              GCGCC GAGCCCG GGTGC              TGTCTTGTTGTTGGC  46 200
CL52_RS19815 NONE
CL52_RS19820 NONE
CL52_RS19825 NONE
CL52_RS19830 4288235 .. 4288248 +  -4.5   -4.1822   TGCCGATCGCGCACA               GG-GCG ATC CGCACC               TTTATTGACCTGGGC  63 64
CL52_RS19835 NONE
        rbbA NONE
CL52_RS19845 4293244 .. 4293255 +  -3.6  -2.91274   TCGTCGGTGCGCTGT                CGCG CCTG CGTG                 TATCGTTGCGCTAGC  42 0
        rfbB NONE
        rfbA NONE
        rfbC NONE
        rfbD 4296923 .. 4296940 +  -4.1  -3.29511   ATCCGACGCCCGCAA             CGGT-GCA TAA TGCCGCCG             TTCTCCAGGCGTCCC  48 71
CL52_RS19870 NONE
CL52_RS19875 4300178 .. 4300214 + -10.7  -2.66316   CCATCGGTGACGGTC    GCTCGGAACCTCGGCGG CAC CCGCCCGCATTCCGGGC    TAATCTGCTGGAAGC  62 55
        dctP 4301427 .. 4301453 + -15.9  -2.73875   CCGAATAAGCCTTGC         GAAGGGGCGGG CACAA CCTGCCCCTTC         TACTCTTGAGCGACA  78 33
CL52_RS19885 NONE
        dctM 4303618 .. 4303636 + -13.1  -5.57054   ATCCGCCTTTCTTCA             GCCCGGC CCAGC GCCGGGC             TTTTTTTAGGTTCTT 100 51
CL52_RS19895 4305375 .. 4305385 +  -2.4  -2.72344   CAACCTGCGCAAATA                 CGCC CGA GGCA                 TCCTTGCCAGTGCCC  39 454
CL52_RS19910 4307314 .. 4307364 +  -3.9  -4.57073   GGTGGAAATCGCAAG GGCGGTTAC-CT-TCCCCCCCGC CCCGACC GTGGGGTGGAAAGCGGCGCCGCC TTTTTCACCGCCATG  72 72
         zur NONE
        znuC NONE
        znuB NONE
CL52_RS19935 4311172 .. 4311182 +  -6.8  -4.08767   CGTAGGGTGGAAAAC                 TCGC GAA GCGA                 TTTTCCACGCGTCAG  67 103
CL52_RS19945 NONE
CL52_RS19950 NONE
CL52_RS19955 4316202 .. 4316225 + -18.2  -5.78622   ACCCGCGATGCCCAG          GGCCCCGGAA GCGA TTCCGGGGCC           TTTTTTTTCCGATCG 100 53
CL52_RS19960 4317356 .. 4317366 +  -8.2  -4.08767   CGTAGGGTGGAAAAC                 CCGC GCA GCGG                 TTTTCCACGCGTCGC  73 36
CL52_RS20040 NONE
CL52_RS20045 NONE
CL52_RS20050 4334261 .. 4334291 +  -8.9  -3.61398   CAGGTCGACCTGCTG      CG-CGGGCTGCGGC GCCA GCGCCAGCCCGGCG       TTGTTGACCAGGCAA  62 512
        phnH 4335426 .. 4335438 +  -4.7  -2.94099   GGCCCGTTCCACGGC                GACCG GGC CGGCC                TCTATACTGCCCGCC  46 50
        phnN 4336380 .. 4336409 +  -6.4  -3.63694   GCCGATGCGCGGGAT       TCTGCCGA-CGCC CACCC GGCAATCGGCGGA       TTCTTGCCGATCGCT  59 374
CL52_RS20075 4337657 .. 4337692 + -11.1  -3.29043   CTCCCGGCTGTACAA    GCAGGCTTGCCCGCG TGGTCT CGTCGGCAAACCTGC     TTCTACAGGCACCTT  69 87
CL52_RS20080 NONE
CL52_RS20085 4340171 .. 4340186 +  -7.5  -2.71364   CGCGGGTCACCACGC              CCGCC GGATCG GGCGG               TGCTTCCACCCCTGG  52 46
CL52_RS20090 4341155 .. 4341172 +  -2.6  -3.40403   CCGGAACGAAACAAT             TCGCGG GGAATG CTGCGG              TTCTCCTGGCACAGC  46 281
CL52_RS20100 4342413 .. 4342426 +  -2.3  -3.15663   CCTGCAGCCGGCTAG               TGCCG CCGA CGCCA                TTCGTCGAGCTGGAT  43 26
CL52_RS20120 NONE
CL52_RS20125 4348627 .. 4348637 +  -2.4  -2.82933   GCAGGCCCTGCTTGA                 GCGG AGC CCGG                 TCTGATGGATTGCCG  40 10
CL52_RS20130 4349494 .. 4349506 +  -4.8  -2.80816   GATCCAATCCCTAGC                GAGC ATTGA GCTC                TCTCATCCGTGCCAA  44 305
CL52_RS21210 4362643 .. 4362697 +  -6.3  -3.03124   GCCGCAGTGATGAAG CGGGTCTTGATGCCGCACTGCGC CGCCCGATA GCGCAGTGCGATGGCCAGATGCG TCTTGCCGACTCCCA  51 447
        rpmH NONE
        rnpA NONE
        yidD NONE
        yidC 4380949 .. 4380966 -  -9.8  -4.34402   GGCTGGATAGCAAAA             CGCCCC AATCAA GGGGCG              TTTTGCTGGCTTTCG  85 47
        mnmE 4379119 .. 4379143 -  -7.1  -3.75897   AACCGGGAAGGGAAA          TCCACACGCAC CTC GTGCCTGTTGA          GTTGGGATCTGGGAA  62 430
        mnmG NONE
        rsmG 4376556 .. 4376566 -  -3.2  -3.04144   TGGCGATGGCGAATA                 CACG GGC CATG                 TCAGCGTCTGTCCAG  43 43
CL52_RS20270 NONE
CL52_RS20265 4374829 .. 4374841 -  -6.9  -2.78463   AGCGCGGCGAGTATA                GGAGC AGG GCCCC                ACCGGTTCAACTATC  49 79
CL52_RS20260 NONE
        atpB 4373405 .. 4373415 -  -3.2  -3.65351   CGAGTTCCATGTAAA                 GCTC CTG AAGC                 TAAGGGGGGTTTAAG  51 81
        atpE 4373160 .. 4373179 -    -2  -3.61103   GAACCCCATCTCAAA            CCGGAAAA ATGA TTAACCGG             CGACAACGAAGATGA  49 18
CL52_RS20245 NONE
CL52_RS20240 NONE
        atpA NONE
        atpG 4369587 .. 4369603 -  -9.3  -3.54459   TGAACCGTTCTTAAA              CCGCGGC AGC GCCGCCG              ACGATTTCCGAGATT  68 4
        atpD NONE
CL52_RS20220 4367615 .. 4367644 - -13.7  -4.96848   TGGGTGACAGAAAAA       GAAAAAGGGTAGC CAAG GCTACCCTTTTAC        TCGAACGCGATGAAG 100 52
        glmU 4366172 .. 4366186 -  -3.4  -3.05384   CGCTTTCTGACGCAA               CCGTCA GGC CGCCGG               CGCTGGTCGGCTCAG  43 37
CL52_RS20210 NONE
        glmS 4363466 .. 4363488 -  -5.5  -2.87229   AGCTGAGCATCAAAC          GGCCCTCTGC TGAA GC-GAGCGCC           TTACTCCACGGTTAC  48 26
CL52_RS20955 4362573 .. 4362587 -    -7  -2.52464   GGCGGGGTCAAGCCA               GCCGGG ATG CCCGGA               CGGTTACGCTGGTCC  48 252
CL52_RS21205 4361445 .. 4361458 -  -2.3  -4.11692   CATCGAGCGTGAAAA               TCACC TGCA GGTGC                GCTTTCATTTCACCC  59 247
       hsp20 4360505 .. 4360550 -  -3.1  -3.29144   TGATGCTCCTGAGAA GGTTGAGGCACGAGGCATCGCG AGC CGCGACACCTCGT-CTCGTGCC GGGTTTTTCTTGTGA  46 58
        clpK 4357642 .. 4357656 -  -3.4  -3.36273   CTCTCCCAACATTAA               GACGCG TCG CTCGCC               GACTTCTTCTTGCGA  46 7
CL52_RS20170 4357433 .. 4357448 -  -6.1  -3.07222   AGGATCAGGTGAACA              GACGG GCCGCG CCGTC               ACGCAAACGGATGGC  49 24
        ftsH NONE
        trxC NONE
CL52_RS20155 4353289 .. 4353312 -  -5.2  -4.71426   TTGGTACGAACAAAA          CGCCATAGCG CAAC CGCCATGCCA           ATATTGGCAAGTAGC  78 69
CL52_RS20150 NONE
CL52_RS20145 NONE
CL52_RS20140 4350893 .. 4350910 -  -5.5  -2.74144   TCTCCATGTTGAAAT             CAGC-GCC AAA GGCCGCCG             GTGCGCCAGCGTGGC  46 7
CL52_RS20135 NONE
CL52_RS20110 NONE
CL52_RS20105 4342350 .. 4342364 -  -9.2  -3.14344   GAGCCCGTCGACGAA               GCAGCG CTA CGCCGC               GAACTGACCGCCTGT  59 70
CL52_RS20095 4340520 .. 4340553 -  -8.2  -3.76224   CGGGCATGCAGGAAA     TGCTCGAGCAAC-TG AAGGG CATGCCGCCCGAGCA     GAAGAAGATGATGGA  68 398
CL52_RS20070 4335962 .. 4335991 -  -4.2  -3.30441   CATCACGCTGGACAA       CTCGACGGCGCTG GCCGA CAGCGTCGT-GCG       CCTGCTGGCGCTGAT  47 83
CL52_RS20055 4333599 .. 4333628 -  -9.9  -3.04263   AGCTGACCCTCAACA       CCGAGGCCGCGGCG CGG CGCCTGGGCCT-GG       CGTTCGCGGTGGAGA  60 181
CL52_RS21250 4330966 .. 4330983 -  -2.5  -3.53012   GGCCGCGGTCGGAAA             TCGGTCG GTAC CGCCCGC              GCCGTCGATTCACCA  47 94
CL52_RS20035 NONE
        arsH 4329855 .. 4329870 -    -6  -3.12351   TCCGTTCAGATCGAA              CGCTGG TTGA CCCGCG               CCGACAGCGCCTCGG  51 0
CL52_RS20025 4329508 .. 4329523 -    -6  -2.70932   GCGCTCCTCGAATCA              GGCGCC ACGC GGCGCG               AAGATGATGATGGCC  46 7
CL52_RS20020 4328456 .. 4328466 -  -8.2  -4.56597   GTCTTGGGTGAAAAA                 GGCC GGA GGCC                 GCTTCCCACCCTGCG  86 43
        arsJ 4326964 .. 4326981 -  -9.9  -3.24925   AGCGCACAGTAGGAA             GATGACC GAGG GGTCATC              AATCAAGCTCGGAAA  64 84
        mdcA NONE
CL52_RS20005 4324366 .. 4324378 -  -3.3  -3.41222   GGCGAATTCGAAAGA                CAGGG TTT CCATG                TTCAGTTGCTCCCAG  49 27
CL52_RS20000 4324081 .. 4324092 -  -2.2  -2.69799   TTAGCGGACACATCA                GTCA TGGC CGAC                 TTCCTCCAGTCCCTG  39 11
CL52_RS19995 NONE
        mdcE NONE
CL52_RS19985 NONE
        mdcH NONE
        madL NONE
        madM 4319446 .. 4319500 - -20.9  -4.08767   GTTACGCGTGGAAAA TCGCTGCGCGAGTTTTCCACCCTACG CATT CGTAGGGTGGAAAACG-GCGCAGCCT TTTCCACCTCTGCTG 100 48
CL52_RS19965 4317563 .. 4317590 -   -15  -3.75629   GATGCTCAACGCAAA        GGTGGAAGA-GGC TTC GCCGTCTTCCACC        CTACGTCCGCGGTGT  88 186
        katE 4310898 .. 4310934 - -11.5   -4.0802   AGGCGAAGAAGGAAA   TCC-GCGTCGCCGCGC TGTTCC GCGAGGCGGCGCCGGA    ATTTCTGCAAATGAT  82 365
        znuA 4307474 .. 4307489 -  -7.5  -4.11394   ACCGCAGGGTGAAAA              CGGCG GCCCGT CGCCG               GGCGCCTGGTAGCGC  72 46
CL52_RS19905 4305506 .. 4305537 -  -4.4  -4.07687   ACTTCTTTCTGAAAA      TCAAGGCTGCCTTCC CCG GGAAAGC-GCGATGA      ACCTTTTTTTATCTG  61 119
CL52_RS19775 NONE
CL52_RS19770 4270300 .. 4270329 -    -5  -3.60627   GGATTCCATGTGAAA      CGATGC-C-GCCGC GTCT GCGTCCGTGCATCG       GGAAAGAGGATGGCG  55 154
        ppnN 4268812 .. 4268835 - -15.2  -4.56914   TGACCGAAACGAAAA          GGCCCGGGGC TTGC GCTCCGGGCC           TTTTGCTTTGCCTGT 100 98
CL52_RS19745 4264007 .. 4264017 -  -4.6  -3.29511   CCGACGCGCGGACAA                 GCGC CGT GCAC                 GCGCCATGCAGCAGG  49 163
CL52_RS19700 4253232 .. 4253251 - -12.8  -3.05384   GCCGCTCCGATGCAA            CCGGCACC GGCA GGCGCCGG             TGCCATGGCGTGCTG  71 47
CL52_RS19695 4252427 .. 4252444 -  -3.3  -3.05844   CGGGTCATGGCAATA             CCTCGCG GGTG CGGAAGG              GCGCTGAGATGAGCG  43 128
        aguB 4251469 .. 4251481 -  -4.7  -4.07568   TGGTGGGGTGGAAAA                CGGCC GCA GGCCT                TTTCCACCACGTGGC  63 82
        aguA 4250176 .. 4250186 -  -8.2  -4.66163   AGGTTCACGGAAAAA                 CCGC TGA GCGG                 TGCAAAAACGAGAGT  86 181
CL52_RS19680 NONE
        tagH NONE
        tssJ NONE
        tssK NONE
        icmH NONE
        tssM NONE
CL52_RS19650 NONE
CL52_RS19645 NONE
        vgrG NONE
CL52_RS19635 NONE
CL52_RS19630 4234348 .. 4234358 -  -2.6  -3.86897   TGGACTGCTCATAAA                 TAAA TCA TTTA                 CTCGTATGTGGTACC  54 19
CL52_RS20915 4233539 .. 4233550 -  -4.4  -3.53012   TGCGCGCTCTGTAAA                CATG GCGC CATG                 TCGGCATTGAATTTA  51 46
CL52_RS19625 4232489 .. 4232503 -  -8.6  -2.94218   ATTCGCGACCACATA               TAAGGC CTT GCCTTA               ACTCTCCATTCAAAC  55 236
CL52_RS19590 4226489 .. 4226513 - -17.1  -3.72576   GGCCGCGCCAGCAAA          CCCCTCCCGGC GCC GCCGCGAGGGG          TTTCTTTTTGTCCGC 100 41
        gspE NONE
        xcpS NONE
        gspG NONE
        gspH NONE
        gspI NONE
        gspJ NONE
        gspK NONE
        gspL NONE
CL52_RS19530 4215261 .. 4215271 -  -8.2  -3.68222   GGTCAAGGTGAAGAA                 CCGC TTC GCGG                 TCGGCGACCGGCTGG  65 223
        hexR NONE
CL52_RS19480 4204949 .. 4204997 -  -6.8  -3.35679   GCGCCTGACCGATAA CCGCGACGACCT-GGTGATCAT GTCGCTG ATGCCCACCGAGGTCG-CGCTG GAGTTCCTGCCGTTC  56 447
CL52_RS19470 NONE
        oadA 4201016 .. 4201034 - -11.7  -5.00616   TCCGGCCCGAAAAAA             GGGAGCC ACAAG GGCTCCC             GAGGGGACTTTCCGG 100 47
CL52_RS19460 NONE
CL52_RS19455 NONE
        glsB 4198737 .. 4198752 -  -5.4  -3.40403   CGCCGCGCATCAGAA              CACCGA CCAG TCGATG               CGCTGCGACAGGGCC  53 4
CL52_RS19445 4197452 .. 4197464 -  -3.3  -3.14132   CGCCCGGGTCAGCAA                GTTGC GCA GCGAC                GACTTCGATGCCTTT  44 516
CL52_RS19430 4193940 .. 4193959 -  -4.2  -3.14132   GCCGCCTGGGACGAA            CTCTGGCA GGGC TACCAGCG             CTTCTATGCCGCCGA  45 400
CL52_RS19415 NONE
CL52_RS19400 4187770 .. 4187785 -  -6.1  -4.13767   GGGGCCATGGGAAAA              GCCAG CCTGGT CTGGC               AGGAGTCGGCGCGAT  67 76
CL52_RS19395 NONE
CL52_RS19390 4182920 .. 4182933 -  -2.3  -2.78384   GGGCGCGCGATGATA               GCACG CAGC CACGC                CCGGAAAGCCCCCGG  39 69
CL52_RS19385 4179990 .. 4180006 -  -5.8  -3.34398   GGGTTTCGTCAAACA              TCGCAG TACTC CCGCGA              GAGCAAGGCGCCGAC  52 2
CL52_RS19380 4178813 .. 4178844 - -10.1  -4.15044   GGGCGCGTCAATAAA      CGACGAACCACGC AGAAAG GCGTGGTTCGGGG       AAGTGTCGCGGCGGC  81 77
        purE NONE
CL52_RS19370 4177122 .. 4177135 -  -9.5  -3.62597   CGTAGGGTGGAAGAA               CGCGC CCCG GCGCG                CCTCCACCCCCGCGG  68 48
CL52_RS19365 4176686 .. 4176706 - -16.1  -2.71712   CTGGCTGGCGTAAAG            GGGGCCGCC GGG AGCGGCCCC            GGCGAAATCAGTGCT  81 33
CL52_RS19360 NONE
CL52_RS19355 4175007 .. 4175037 -  -6.8   -3.4252   CTCGAGCGACGACAA      GCTGGCGCGCATG GCCGAG CTCG-GCGCCAGC       CATCTGATCAACTAC  56 423
CL52_RS19340 NONE
        glgP 4169925 .. 4169983 -  -8.6  -3.39327   GCTGCAGAGCGAGAA CGGCCTGCTCGGCATCGGCCCCTTCCCC AGC GAAGAGGAGGTCGACGCCGACCTGATCA ACGCCGGCAAGCAGA  60 475
CL52_RS19310 4165972 .. 4165985 -  -2.3  -2.59154   GAAGAGCAGAGGAAG               CGGTG TGCG CACGG                GGCCATCCTGGTCGG  38 86
CL52_RS19305 4164809 .. 4164823 -   -10  -3.01791   ACCCGGGCTCGAACA               TCGTGC TGG GCACGA               TCGTGGCGATTTACC  60 94
CL52_RS21190 4162856 .. 4162870 -  -2.8  -4.13767   TCGGTCAGCTGAAAA               GGGA GCGCGTT TCCC               ATCAGTCGTATCGAA  61 87
CL52_RS19285 4160828 .. 4160846 -  -3.8  -3.29144   CGACGGCGGCGACAA            GCCC-CC TTTTAC GGCGGGC             ATCGTGAGCGAGATA  48 112
CL52_RS20910 4157745 .. 4157802 -  -9.2  -4.09864   ATCGAGGGCGTAAAA CATTCCGGCCGAGGAGC-CAAAATG-GG TACT CCACATCTTGTGCCCCTGAGCCGGCAAG CACTGGCGCTGCTGG  75 233
CL52_RS19235 4151943 .. 4151973 - -17.7   -5.0538   CGGGAGCGCAAAAAA      GAAACGCCACCGCG TTGC CGCGGTGGCGTT-C       TTGTGTCGCCCGGCG 100 42
CL52_RS19210 4144187 .. 4144211 -  -4.1  -2.70932   GGCCGCGTTCAAGGA          TGGCATGCGCA GTC TGCGCCTGTCC          GGCGCACAGAAGATC  41 203
CL52_RS19195 4140253 .. 4140275 - -12.7  -3.04203   TGAACCCAGAAAGGA           CGCTGGCGC TTAGC GCGCCAGCA           ATTGTTCCAGTCGGT  71 12
CL52_RS19190 4138917 .. 4138938 - -17.3  -2.93623   GGCGCCAAAACAGCA           GCGCCCCGT CGAA ACGGGGCGC            GCGCGACAGCCGGTG  87 44
        argE NONE
        argA 4136226 .. 4136253 - -13.6  -3.96483   ACCTCACCCAAACAA        GGTGGAAAA-CGC TGC GCGGTTTTCCACC        CTACGGTTGTTCTGG  90 134
CL52_RS19120 NONE
        ompR 4117503 .. 4117544 -  -8.5  -3.00525   TCTGCGGAAACCAGA CG-GGCGTCTTCACCGGAGC CGG GCTCCGGCCGCGGCGCCGCG ACGGCTCACCGGTTG  57 31
CL52_RS19110 4115822 .. 4115844 - -11.2  -3.30443   GCAGGAGTACATCAA           GGAAGCCGGC GGC GCCGACATCC           GCTGTTTCGTTGTCG  66 377
CL52_RS19095 4114251 .. 4114304 - -16.5  -3.27022   TGCATTTTACACGAA GCGGCGGCCTGCCGAGGCACCC-GCC ATC GCCTGGGTGGACCGGCCTGCCGCCGC GCCGTTCCCTGCCGT  88 41
        hslO 4113293 .. 4113324 -  -5.8  -4.11216   CCGTGATGGCGAAAA      GGTTCACCG-TGGCC AGA GGCCATCAGTGACGC      GTAGCCGCCGGTCCC  67 16
CL52_RS19085 4111577 .. 4111594 - -14.1  -5.24129   TGCGCCCATAAAAAA             GGCCGCC CGTA GGCGGCC              TCGTGCGGGCGGCAG 100 45
CL52_RS19080 4110823 .. 4110850 - -13.4  -2.52676   CAGCGGTGCAACGCA        GGCGGCTTCGGC ACTC ACTGAAGCCGCC         TCAAACCGTCAGAAG  71 34
CL52_RS19070 4106938 .. 4106954 -  -7.9  -2.64616   TGGTCAGCGAGACGA              CCAGCGC CCT GCCCTGG              TTGCCCTCGCGCCTG  50 155
CL52_RS19045 4100227 .. 4100259 - -27.1  -4.12188   GCAGTAGCCCGAAAA      CGGCAAGGCCCGCCA TCA CGGCGGGCCTTGCCG      GCGCGCTGCACTCAC 100 37
CL52_RS19015 NONE
CL52_RS19010 4093841 .. 4093853 - -10.5  -4.25104   TGGTTGGTACGAAAA                CGGCC AGA GGCCG                CTCACCTGTAGGAGC  85 114
CL52_RS19005 NONE
CL52_RS19000 4091795 .. 4091843 - -21.8  -2.57211   ATCGGCGCGGACAAG CG-CAGCCGCACCGAAG-CGGCGC TCG GCGGCGGCCTCGGCGCGGCTGGCG GCAACGTCATCGGCC 100 288
        nudE NONE
        cysQ NONE
CL52_RS18955 4081252 .. 4081287 -  -3.2  -4.42386   GGCTGAGCGAGAAAA    TGACCTGCGTCGAGGGC GAT GCCTTCGAGGC-GATGA    AGGAGCTCAAGGCGG  66 376
CL52_RS18940 4078782 .. 4078810 -  -9.5  -2.87564   TGACGGCGGTACAGA        GGCGCGACCTTAG CAG CTAACGCCGCGGC        GGTCAGCCGACGCCC  58 28
        mutM 4077922 .. 4077963 -  -6.4  -3.03124   CCTTAGTCGTGAACA CCGTCAATGCACGCGCTG CCGGGT CAGCGCTGGCAGCGACCG  CAGTAGACACTGGCG  51 7
CL52_RS18930 NONE
CL52_RS18925 4075138 .. 4075149 -  -5.8  -3.12351   GCCGCGGACATCGAA                GGCA GCAA TGCC                 TATGGCCTCGTCGGC  49 441
CL52_RS18890 4068158 .. 4068170 -  -9.1  -3.16564   GGCGCATTTCATGAA                GGCGA TGA TCGCC                TACGTGCGCGACAAG  59 436
CL52_RS18880 4066835 .. 4066848 -  -3.7   -3.9461   GCCGTTCAACAAGAA               CCTGC TGCT GCCGG                CCTGCGAGCTACTCG  59 189
        ftsY NONE
        ftsE NONE
        ftsX NONE
        rpoH 4059303 .. 4059343 -   -22  -3.71527   GCCGAACCACGGAAA  CGAAAACGCGGAGCCTGC ACAGG GCAGGCTCCGCGTTCTGG  TCGTTGCCGCAATCT 100 40
CL52_RS18825 4053345 .. 4053356 -  -3.6  -3.22298   CTCATCCACGACCAA                GGCA AAGG CGCC                 GGGCTGTTGCTGGCC  44 43
        thiS NONE
CL52_RS18815 4052159 .. 4052184 - -14.1  -3.52204   GCATCCTGAAATGAA         CGAAGCCGACT CCAC AGTCGGCTTCA          GGGTCAAGCATCGGC  79 64
        trmB 4051377 .. 4051387 -  -2.4  -2.82516   TTGGCGACGAGGACA                 TGGC CCC GCCT                 GCACCGCTTCTCCGG  39 54
CL52_RS18805 NONE
CL52_RS18800 NONE
        pilT NONE
CL52_RS18740 4037869 .. 4037894 -  -5.3  -3.53444   GCAGCGGCGGGTAAA         GGCGGTGCAGC GCGA GCTCCACCATC          TACATGCCTTCGTTC  54 512
CL52_RS18725 4035792 .. 4035811 -   -15  -4.18197   AGGCGTGACGCAAAA            GGCCGGAG CCCG CTCCGGCC             TTTGCTTTTTTCAGA 100 36
        pilG NONE
        pilH NONE
CL52_RS18675 4028317 .. 4028335 - -13.8   -4.5774   CATCAAGAACCAAAA             GGCCGGCC CAA GGCCGACC             TCGCCTACAACTCAT 100 45
CL52_RS18670 4026183 .. 4026214 -  -7.9  -3.01712   TGCCCTCGTTCAAGA      CCGGCGACGGCAG GTTCAG CCGCCATCGCCCA       GCGCTCAGGCCTGTC  54 30
CL52_RS18665 NONE
CL52_RS21650 NONE
CL52_RS18655 NONE
CL52_RS18650 4016507 .. 4016544 - -19.1  -2.64803   CGAGGCGGAAATCGA   CCAGGCGCGCCAGCAGG GCTT CCTGCCGGCTCGTCTGG    GGCCGCGCGTGTTGC  87 118
CL52_RS18635 NONE
CL52_RS18630 4013081 .. 4013104 - -18.2   -3.0439   AGCGACCACAAAGCA          GAACGCCGGC AAGC GCCGGCGTTC           AATCCCTCGGGGAGG  90 43
CL52_RS18625 NONE
CL52_RS18620 NONE
CL52_RS18615 NONE
CL52_RS18610 4005824 .. 4005841 -  -9.8  -4.82667   CGACGAGACGAAAAA             GCCGCC TGCAAG GGCGGC              TTTTTTTTAGGTTCA 100 38
CL52_RS18590 4000567 .. 4000581 -  -5.6  -3.89614   GTCAACGCGGACAAA               TGCAGC AGG GCTGCT               TCAGCGCGACCATTG  62 26
CL52_RS18585 3999740 .. 3999763 - -10.2  -3.29144   GCAGCCTTGCCACAA          GCGCTGCGGA GTTG CCCGAAGCGC           ACTGCACCGAACAGC  63 318
CL52_RS18565 NONE
CL52_RS18560 3994663 .. 3994675 -  -4.7  -2.62983   TGCACCGCCATACTA                CCTGC GAT GCGGG                TGGGAATGAGATCGG  43 47
CL52_RS18555 3994009 .. 3994034 - -12.5  -4.88407   CGACGGAATGAAAAA         GCCCCGAC-GGC AAT GCCGGACGGGGC         TCCTTTATCCTGGCG 100 49
CL52_RS18520 3986222 .. 3986237 -  -8.2  -3.73647   CGGATGGACGAACAA              CGGCCG TGAC CAGCCG               CCGCTCAGTCGAGCA  69 30
         tkt 3984054 .. 3984064 -  -8.2  -4.07568   CCTGGCGGTGGAAAA                 CCGC TGC GCGG                 GTTTTCCACCCTACG  73 93
         epd NONE
CL52_RS18505 NONE
CL52_RS18500 NONE
CL52_RS18495 3981009 .. 3981057 -  -5.9  -3.55444   GTTTGATCGTGTAAA GCC-TGCCGCAGCGGCCAACGCT GTTCA AGCGC-AGCAGATGCGGCGCGGC ATTGTAGTGGCGGCG  57 81
         fba 3979860 .. 3979884 - -17.2  -5.40072   GGTTTCCGAAAAAAA          GAAGGCCCGC ATCGA GCGGGCCTTC          CTTTTATCCTCTGCG 100 43
CL52_RS18480 3978458 .. 3978476 -  -4.6  -2.86264   AAGTATTTAGCAAAT             TGTCAC TGAATAC GTGACA             TTGCATTACGCAAGA  46 76
CL52_RS18475 NONE
CL52_RS18470 3977505 .. 3977537 - -12.6  -2.75382   CATGTCAGCCAAGCA      GGGGCGTGCGCCGC ATCTG GCGGTACACGCCCG      GCCTGGCTCAGGCGG  68 33
CL52_RS18465 3975108 .. 3975127 -  -6.4  -3.03124   CGGTAGCCGGCAATA            CCTGGATC CTAT GATCCACG             GGGAGGTAGACCGAT  51 51
CL52_RS18460 3974723 .. 3974746 - -19.6  -2.56124   GGGAGTGAAAGACAT          GCGGCCGCGA AAGC TCGCGGCCGC           GTCGGCGCCCGTCTT  90 39
CL52_RS18455 3974240 .. 3974259 -  -6.3  -3.25652   CGCACTCAAGCAATA            CGCGCCG GCAGAG CTGCGCG             AGGTGGCCGAGCGGC  53 271
CL52_RS18440 3969415 .. 3969428 -  -5.9  -3.12668   GAGCGTTACAGCGAA               CCGCG CTGC CACGG                CCCCCAGATGGCAAA  51 2
CL52_RS18420 NONE
CL52_RS18415 3963611 .. 3963634 - -16.8  -5.40072   TTCCTTTCAAAAAAA          TCGGGCTTCC AATA GGAAGCCCGA           CTTGTCTTTCAACCG 100 81
CL52_RS18410 3962834 .. 3962848 -  -3.4  -3.15544   GCTGATCCTGATGAA               TCGCGC ACG GCGCAT               GGGGCTCGAGTCGAT  44 244
CL52_RS18390 3956862 .. 3956879 -  -8.3  -2.70932   TCTGCTGCGCAAGCA             GGCGCCG GTGG CGGCGCT              GCCGGGGCTGGTGGT  52 385
CL52_RS18380 NONE
        treF NONE
CL52_RS18360 NONE
CL52_RS18355 3950930 .. 3950961 - -10.8  -3.56643   GGGAGAGCGGCGAAA      CGGCGATCGCCACC GATG GGCAGCGATCGTCA       GGCCGCAACGGCTGT  73 223
CL52_RS20900 3950589 .. 3950620 - -16.6  -4.46212   CGGCCGAGCACAAAA      GCACCCTGCCG-GGC AGC GCCACTGCAGGGTGC      GGATGGTTTTTCCCG 100 70
CL52_RS18345 NONE
CL52_RS18340 NONE
CL52_RS18335 NONE
CL52_RS18330 3943833 .. 3943843 -  -6.8  -3.22858   GGAAGGACACGAAGA                 CCAG ATC CTGG                 TGCAGGCCTTTCAGC  54 492
         fni 3933318 .. 3933345 -  -8.4  -3.53012   TGCTGTGCCCGGAAA        GCCGCACCAATGC GCT GCACCG-CGCGGC        GCTGAAGAGTACGCG  62 309
        rlmJ 3931497 .. 3931542 -  -3.1  -4.56597   CGGTGGGGTGAAAAA CGACATCCACCCTACGAATCC AGGC GTCTGCGTAGGCTGGATCGCG CTTTATCGATCCACC  69 90
        bioB NONE
        bioF NONE
CL52_RS18265 3926544 .. 3926573 -  -2.7  -2.78463   ACGCGTGGGACGACA       GCTCGGCCAAG TCAGTCCT CCTCGCCGCGC        TGCATGAAAGCCAGC  39 7
        bioC 3925747 .. 3925772 -  -2.5  -3.98256   CCCGTACGAAAAAGA         TGCCGCTCA CTGGCGCT TGCGCAGCA          CGCCATAGATCGCCT  57 6
        bioD 3924985 .. 3925022 -  -4.7  -2.76263   GCCAGCATTCAAGCA   GGCAT-TGGCACGCCCCG CAA CCCGGCGTGCCGGATGCG   GCTCACGATTCCGCC  44 28
CL52_RS18250 3924680 .. 3924698 - -11.7  -4.67011   AATGGGAGGGAAAAA             CGCCTCG GGAGG CGAGGCG             GCTCAGGCCTGAGTG 100 28
CL52_RS18245 3922650 .. 3922670 - -18.3  -5.02715   AGATGAAATGAAAAA            GGCCGCTGC AAT GCAGCGGCC            TTTGCTCGACGCCTT 100 46
CL52_RS18240 NONE
CL52_RS18235 3919036 .. 3919051 - -11.8  -5.26119   GGCGGAAAAAGAAAA              CCCCGC GTTA GCGGGG               CCTTTGCAGACTGAA 100 328
CL52_RS18220 3914919 .. 3914944 - -13.3  -4.56775   AGGCTCGCGCAAAAA         GAAGACCCGCC AACT GGCGGGTCTTT          TTTTGCTCGCGGGTC 100 56
        glnE NONE
        ilvE 3906368 .. 3906382 - -11.4  -2.79492   GCCGCAAGCCGAAAC               GCAGCC ACT GGCTGC               TCGGCCTGCCGCCTG  63 52
        waaF 3905284 .. 3905313 -    -2  -2.50016   CTTGATCAGCAACAC       CCGCA-CCTAGCG CACCT CGACCGGCTGCGG       CACGAGGCGCTCGAG  37 2
        waaC 3904296 .. 3904308 - -10.5  -2.79183   GCCAGTTGCATCAGA                CGGGC TCC GCCCG                CAGCAGGGCTTTGAG  60 8
CL52_RS18185 3903157 .. 3903175 -    -3   -2.8547   ACCCGGCACAGTAGA             GCTCGAAC CCG GCTCATGC             CGCTTCCCCGAGAAT  42 20
        rfaP 3902238 .. 3902254 -  -2.2  -2.78596   CAGCCGGCCATCAGA              GCGC GTCTCCATA GCGC              AGCTTGCGCCGATAG  39 4
CL52_RS18175 NONE
CL52_RS18170 NONE
CL52_RS18165 3899258 .. 3899272 -  -4.2  -3.51032   AGTGGCGAATTATAA               CGGC ACCGGCA GCCG               CGAGACATCACGACG  51 86
CL52_RS18160 NONE
CL52_RS18155 NONE
CL52_RS18150 NONE
CL52_RS18145 NONE
CL52_RS18140 NONE
CL52_RS21555 3892307 .. 3892341 -  -4.2  -5.93252   TCTAAAAAGAAAAAA     GCTTGAGCAGTTCCCC TTT GAACAGCTTCTCAAGC     TTTATAGGAGCGCTT 100 62
        msbA 3889901 .. 3889911 -  -3.2  -3.32997   TCCGCAGAAACCCAA                 GCAT CAC ACGC                 CAGTCTCCACCACGG  46 18
CL52_RS18120 NONE
CL52_RS18115 3887587 .. 3887625 -  -6.8  -2.78715   AACGGCGGGATCATA GCACGCGACC-G-AG-CGG CGAC CCGGCTACAGGTCGCGCAC  CCAGAACAGCTCATG  49 11
        hldE 3886074 .. 3886120 -  -4.3  -3.01924   GATTCGCTGGGAAGA CTGGTGGGCCGCCAAGCCCGTCG ACG CGACGG-CCTGACGACCCGGT-G CGGCCTCAAGCCTTG  45 31
        waaA 3880921 .. 3880940 -  -4.2  -3.71487   GACCAGACCGAACAA            CAGCGC-GA AAG CCTGCGCCG            CCAGGTGGTCGAGGC  54 510
        thiC 3877298 .. 3877308 -  -4.6  -4.07568   CTGGCTGGCGGAAAA                 CGAC CTG GCCG                 GCGACACGCAGTTCC  62 298
CL52_RS18065 NONE
CL52_RS18060 3875448 .. 3875471 -  -7.4  -3.48276   GCCTCGGTCACATAA          CCGGCCGTTCA CCC TGTACG-CCGG          CCCGCTCACCTGACC  60 51
        cpdA 3874487 .. 3874499 -  -2.6  -3.40382   CAGGAAAGGCTACAA                GGCC CGAGC GACC                CACCGCAAGCCGAGC  47 70
CL52_RS18050 NONE
        parE NONE
CL52_RS18040 NONE
CL52_RS18035 NONE
        parC NONE
CL52_RS18025 3867021 .. 3867047 -  -6.4  -2.72558   ACAACCGGTGAAGGA         CTGGTCGACCTG GGC CAGGGCGAACTG         CTACTCAGCGAGGCG  47 322
        serB 3864304 .. 3864338 - -15.8  -3.08327   ATCAAACCCTGAACA    CGGACAGCCCGG-TC GGCGAG GAGCCGGGCTGCCCG     GCCTTCACTCCAGGC  81 30
        motA NONE
        motB 3853429 .. 3853440 -  -7.2  -2.88544   CCTGACGTCGATACA                CGCG TCGG CGCG                 CTGTCCGAGCAGACC  50 354
CL52_RS17965 NONE
         orn 3851181 .. 3851229 -  -8.1  -2.70932   CCGGCTCGGCAAGTA GCG-GCTGTGTCGGCCCGG-G-CGC GCA GCGTCTCCGGGCCGGCTC-GCTCAC ACCTTGATGAAGTGC  54 22
CL52_RS17940 NONE
CL52_RS17935 NONE
CL52_RS17930 NONE
CL52_RS17920 NONE
        nadD NONE
        rsfS NONE
        rlmH NONE
        mrdA NONE
        rodA NONE
        mltB NONE
CL52_RS17885 NONE
CL52_RS17880 3835859 .. 3835873 -  -7.8  -2.78816   GTATCGGTCATGAGA               CGGACC CGT GATCCG               CAAGGCGCACCGGCG  52 69
CL52_RS17875 NONE
        lipB NONE
        lipA 3833910 .. 3833929 - -10.6   -4.7173   CACTACATGGAAAAA            GGTCCGGC GATT GCCGGGCC             TTTCTAGGTCACTCG 100 34
CL52_RS17860 3833354 .. 3833370 - -15.1  -4.87291   CACGGCAACGAAAAA              GCCCCGG AAT CCGGGGC              TTTTCATTTGACGCT 100 50
CL52_RS17835 3826857 .. 3826867 -  -2.4  -3.28906   TGAAGAAATAGCGAA                 TCGG CAC CCGG                 CAACCCCTTGTCTCT  45 85
CL52_RS17830 3825568 .. 3825585 -  -3.4   -4.0616   TACCTCAAGCAGAAA             CTCGTCC CCTTC GG-CGAG             TACGTTCCGCTGCAG  59 482
CL52_RS17775 3814243 .. 3814278 -  -9.6  -2.71791   AGGTTTCGGCCAAAG    CGCCCGGCG-ATCCCCC GCT GGCGGATGCGCCTCGCG    TCTCAGGCGACCCGC  57 28
CL52_RS17770 3812499 .. 3812534 -  -8.1  -2.52676   TATCGCCGCAATCTA    CCGCGCCTGC-CGGTC GGTCA GTCCGGGCTGGAGCGG    TCGAGGATTGGCGGC  53 7
CL52_RS17765 3809103 .. 3809113 -  -6.8  -4.13767   TCTTGCACTCCAAAA                 CTGC CTC GCAG                 CCCGCTAAGATGCGT  69 128
        casA NONE
        casB NONE
       cas7e NONE
       cas5e 3804825 .. 3804859 -  -3.6  -2.75712   TCACGCAGCCAATCA    TCCTG-GCGCGGCGTG GCGAG CA-ATCGCGCACAGGA    AAAATAATGAGTCAT  40 37
       cas6e 3804207 .. 3804218 -  -4.4  -2.87132   TTCTTCCCTGATATA                GGTT GTTA AACC                 CGCCTGACAAGCAAC  44 19
CL52_RS17735 NONE
       cas1e NONE
       cas2e 3802090 .. 3802126 -  -8.8    -3.794   GGGGAACGCACCAAA    CGTAACCGATTGTCCT ACAAG AAGAAAATCGGCCACG    AAAAATCTACCGAGT  69 48
CL52_RS17720 3795872 .. 3795896 - -15.8  -5.75342   TTCGGGCAAAAAAAA          TCCGACGCCA GCGAT TGGCGTCGGA          TCTTGCAGCACACCG 100 77
         amn 3794217 .. 3794269 - -10.7  -3.53091   AGCCTGCCGGCCAAA GGCGACCCGAAACTGCCCGAC-TTCC TCAA GGAATGACGGGCC-TTCC-GGTCGCC AGCACGGCGAGCCGC  71 41
CL52_RS17675 3786073 .. 3786085 -  -6.2  -3.11687   TGAACTACCACGCAA                GGCG GGCCG CGCC                GTTATGCTCGCTCCG  51 145
CL52_RS17670 3784730 .. 3784740 -  -8.2  -3.06796   GGCTACGCCACGCAA                 CCGC AGA GCGG                 CGCACCGGGCTATGA  55 461
CL52_RS17660 3783607 .. 3783617 -  -3.2  -4.84359   TCAGGTGCAGAAAAA                 GGAC CTG ATCC                 ACAACGACTACACAC  75 397
CL52_RS17600 3768795 .. 3768831 -  -7.2   -2.7185   ACGACCGTCCAACCA   GC-GGACGCACCTGCCG GCTG CGGCAGGCGTATACTGC    CCCGTTTTCGCGCCC  52 325
CL52_RS17570 3764731 .. 3764756 -  -2.5  -3.05384   GCCGCCTCCACCTAA         CGGCACGGCA GTCAAGG TGCTG-GCCG         CCCTATGGTTGCTGG  41 87
        argC 3762253 .. 3762271 -  -2.2  -3.72241   GATCAACTATTCAAA             GGCCAGCC GTC GGTCGGCA             CTGGCTCACTCACGG  52 35
        erpA 3761774 .. 3761795 - -15.1  -5.24531   ATCCGGCATAAAAAA           GCCGCGCCC AGCA GAGCGCGGC            TTTCTTCCGTTCGGC 100 48
        tyrS 3757427 .. 3757444 -  -2.6  -4.46233   GCAATCGCAAATAAA             CTCTCG AATTCA CGAGTG              TTACTTGTGTTGCTG  65 493
CL52_RS17530 3755817 .. 3755831 -  -2.8  -3.21912   GTGGGAACTTATGAA               GAAGCT GAG ATCTTC               GATTAAGGAGGTGAT  44 29
CL52_RS17525 NONE
CL52_RS17520 3755536 .. 3755567 -  -2.4   -4.1043   GGTAAAGACCAGAAA      TCAACATTCATCAGC CAG GCTGA-AAATGCTCA      TTTCTAAACTCTAAC  57 47
CL52_RS17515 NONE
         rrf 3752164 .. 3752199 - -23.4  -3.44848   TCCGCCGAGCAAAGA    CAAACCCCCGACCAGC GAAT GCGGGTCGGGGGTTTG     GTATAGGTGCTTGAC 100 34
        birA NONE
CL52_RS17500 NONE
CL52_RS17495 NONE
CL52_RS17490 NONE
CL52_RS17485 NONE
CL52_RS17480 3749285 .. 3749314 - -16.7  -4.32034   TGATCACCATTAAAA       CAAAGGCAGATAT TCTC ATATCTGCCTTTG        TTTGATTTGGAGCTC 100 33
         tuf 3748001 .. 3748024 -  -8.1   -3.3353   TGGCCTAGAAAGAGA          CAGGCCGAC TATTAT GCCGACCTG           CAGAGGCTATATCAA  60 45
CL52_RS17470 3747890 .. 3747923 -  -7.5  -3.58533   CTAGAACCTTCTAAA     GACTGCCGGACTTTCA ATT TGAAAGTT-GGCAGGC     CAGGAGGGAATCGAA  62 18
        secE 3747500 .. 3747520 -  -2.5  -2.95298   CTTAGCCACGAGACA            TCCTTAACC TAC GATCATGGA            AACCAGCCAACCCAG  40 8
        nusG 3746916 .. 3746939 - -15.2  -5.24129   CTCGCCGACAAAAAA          CCCCGCAGCC TGCT GGCAGCGGGG           GTCAGGGATGCAATT 100 46
        rplK NONE
        rplA 3745693 .. 3745719 - -15.8  -3.18274   GGGACCCCAATTTAA         TGCAGAGCCCGC CAA GCGGGCTCCGCC         GAACTCACGCCTCGA  83 30
        rplJ 3745022 .. 3745041 -    -5   -3.2856   GAAAGCTGAAAGAGA            CCG-TGCCT ATC AGGCAGCAG            CAGCTTCTTTCTGGT  50 15
        rplL 3744517 .. 3744540 -   -16  -4.78149   GCCATAACGGAAAAA          GGCCGGTGGC CAAA GCCACCAGCC           GTCAGCCTCACGCGT 100 72
        rpoB NONE
        rpoC 3735946 .. 3735968 - -15.6  -5.07011   GACACAAACGAAAAA           TGGCAGGGCT CGT AGCCCCGCCA           AATTAAGGGAACGAG 100 102
        rpsL NONE
        rpsG NONE
        fusA 3732810 .. 3732824 -  -2.1   -3.8647   AGCCACGACAGTAAA               CCTCT TACTT AAAGG               GCTGAATCAACCTTG  54 32
         tuf 3731570 .. 3731587 - -14.1  -4.71186   ACCAGCAATAGAAAA             GGGCCCC CGAA GGGGCCC              TTTTCCAGACTCACC 100 45
        rpsJ 3731130 .. 3731148 -  -6.8  -2.63301   CAGAGCGTTACACGA             CTAAAACA GAG CGTTTTAG             CCGAGGCTGATCTGC  48 22
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN 3724801 .. 3724822 - -14.5   -3.6053   CTGCTCAGAAATGAA           TCAAGCCCC AGAA GGGGCTTGA            TCGACTACTGGACAG  85 64
        rpsH 3724272 .. 3724282 -  -3.2  -3.14132   CGGGGTTTTTAGCAA                 CACG AGA CATG                 CTTTATCCCCCTTAG  44 37
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD 3722705 .. 3722720 -  -3.2  -3.21416   CAGTTGCATGATTAA              CCCTCC ACGC GGAGAA               GGTAATAGGCCTTGT  44 6
        rplO NONE
        secY 3720933 .. 3720959 -  -5.7  -2.79023   GAACCTTACGAACCA         CTTCAGCGGAG CATGC CGCCGCCGTAG         CCCTTCAGGTTGGCT  46 1
        rpmJ 3720748 .. 3720771 - -15.3  -3.30513   GAAACAAATATTCAA          CCCGGCAGC GCACTA GCTGCCGGG           CGTCACACCTTCACA  84 42
        rpsM NONE
        rpsK NONE
        rpsD NONE
        rpoA NONE
        rplQ 3717749 .. 3717766 - -11.3  -5.71983   TCAAGCATAAAAAAA             CCGAGTC CAAG GACTCGG              TTTTTCTGATAACGC 100 48
CL52_RS17270 3716104 .. 3716123 -   -15  -5.24129   TCGGCGCATAAAAAA            GCCCGCAG CACG CTGCGGGC             TTTTTTTGTTCCTCA 100 46
CL52_RS17260 3711616 .. 3711634 - -10.3  -2.52543   AGGGGCCCCAACGCA             TTCCGCC CGGGC GGCGGAA             CAGAGACCAGTGATC  59 130
CL52_RS17255 NONE
CL52_RS17250 NONE
CL52_RS17245 3709221 .. 3709251 - -16.3  -2.87344   TAGCCGTCCCAGACA      GC-AGAAAGGCGCC CATC GGCGCCTTTCTTGC       GTTTTCACCAGGCGT  83 40
CL52_RS17235 NONE
CL52_RS17230 NONE
CL52_RS17225 3705668 .. 3705692 -  -3.6   -3.2056   ACGCATACGCATCAA         CAGCT-CCTCA ATCG TGACGCAGCTG          GTCGGCCAGCCGGTC  44 8
CL52_RS17220 NONE
CL52_RS17215 3704526 .. 3704537 -  -2.2  -2.84459   AACACGAGCAGCAGA                CGAG GCAT CTCA                 GCGTTCTCCTTGCAG  40 23
CL52_RS17210 3703301 .. 3703317 -  -5.1  -3.57792   CGAGCCAGGGGTAAA              GGTAGAG CAA CTCTATC              AACCGTTCTGGATCG  54 150
CL52_RS17185 3699407 .. 3699431 -  -6.4  -4.11216   CGGCGATGCGGAAAA         CACGCTCAAGC AGTT GCTTG-GCGAG          GACAACGAGAACGCC  66 458
        yedE NONE
        yedF 3697099 .. 3697144 - -10.9  -2.62184   CCTGGCGCCAGAGCA GCCGCCGCGCGCGCTTGGCGAC CTT GTCGCGCTGCT-GCGCGCCGGC CTGGCTGAACGCGGG  59 251
        nrdR NONE
        ribD 3693952 .. 3693974 -  -6.9  -3.28712   GCCCCGCCCTGAGAA          CG-TCGGGCC TCGC GGCCCGGGCG           AGTTTTTATCACAAA  55 112
CL52_RS17140 NONE
       ribBA 3691918 .. 3691940 - -17.7  -4.14764   TCTTAAAGAACGAAA           GGCGCCGCG GTCTG CGCGGCGCC           TTGGATTATTCGGCC 100 31
        ribE NONE
        nusB 3690920 .. 3690935 -    -6  -2.51312   AACTCACCCAGCAAG              GCGCGG GCCT CAGCGC               TTCTGGCTGCGCACT  45 19
        thiL NONE
CL52_RS17115 NONE
CL52_RS17110 3688622 .. 3688638 -  -2.1  -3.37513   ATATTGTAACATCAA              CTCGCTG CGG CAGAGCG              TAGGCCGAATGCTGT  45 77
        ribA NONE
CL52_RS17100 3687384 .. 3687407 -  -2.2  -3.60048   CGGCGGCGAAAAAAG          CCATCCGCGC GCTG GTGCGGGTCG           ATGAAGAGGGGCGCG  48 175
CL52_RS17070 3680701 .. 3680724 -    -3  -2.52896   TCAGTTGCCAAGCGA          TTGCAGCGACC GTT GGTCGC-GCCC          TTGCCACCCCGCGGT  39 41
        adhP 3679418 .. 3679434 -  -4.3  -3.41051   CGAGCTCGACGAGAA              CCTGATG CTG CGCCAGG              TACCCGGCGTGTTCT  51 187
         bfr 3677692 .. 3677711 -  -4.2  -4.07568   CCTGCCCGGCGAAAA            CGGTTCCGC CGG GCGCA-CCG            CGCAGGGGCTGCGTC  61 39
CL52_RS17050 3676956 .. 3676987 -    -8  -3.21416   CAGCGTGATCAGCAA      TGCCCTGCTGCTCAA GCG CTG-GCAGCCGGACA      CCCATACAACCGGGG  54 467
CL52_RS17035 3673773 .. 3673810 -  -5.5  -3.79906   GCACTTCCAGAACAA   GGCCCACCTGTTCCA CGAGATGC TCGACCAGGTGCGCC    TGCCCCCCGAGCAGA  60 493
CL52_RS17025 3672178 .. 3672233 - -12.4  -3.05463   AGCTTTCGCAGTGAA GC-CGAGGCCCGCCGCTTCGTCGCCAC CCT GCAGCGCCGAATCGCCGAGCCGCACGC CCTGCCCAAGGCAGG  68 50
CL52_RS17010 3669484 .. 3669507 - -18.2  -3.35992   ACCTACCTGAACGAA          GAGGCCGCAC ATCG GTGCGGCCTC           CTGGTGATGCTGCAG  93 46
CL52_RS16975 3663966 .. 3663998 -  -9.8  -3.37796   CCTGATCACCGACAA      CAGCGCACGCCC CCTGAACCT GGGCGAGCGCTA      CGGGCTGGAGGTGGG  65 170
CL52_RS16930 3651033 .. 3651044 -  -3.6  -4.25104   CCGCCTGGACGAAAA                CGCC CAGG GGCA                 CGGGCTGGGGCTGAG  65 166
CL52_RS21165 3647991 .. 3648029 -  -6.4  -2.91383   AGGCTTACGGAGATA   CTGAGCCGGCCGGCGCTC GGG GAGTTCCGGCAGGGCCTG   TAACAAGGTTCATCG  50 35
CL52_RS16900 3647641 .. 3647653 -  -4.8  -2.78384   GGGCCGGCGATGATA                CCTG GCTGG CAGG                CGTGGCGCAGGGCGT  44 62
CL52_RS16895 NONE
CL52_RS16890 3645858 .. 3645872 -    -7  -4.15453   CAACCGAGTGGAAAA               GGCTGC GCC GCCGCC               ACCCTACCCCTCATC  69 29
CL52_RS16875 3641067 .. 3641103 -  -8.7  -3.53811   TGCAGCCGCTGGAAA   CCACCG-CGGGCGC-GC CGCAT GCAGCGCCGGTCGGTGA   CTTCCAGCAGGCCCG  62 183
CL52_RS16860 3637791 .. 3637828 -  -3.4  -3.36273   CGTGGTGAACATCAA  TCAGG-TGGCCGATCGCG TCAC CG-AATCGGCCGGCCAGA   CCGCGCAGGCCAGCA  48 125
CL52_RS16845 3631669 .. 3631715 -  -7.1  -3.68341   AAGCCCACCGAACAA CGCTGCCCGA-CGCGACGAGCGC CCA GCGC-CGGGGCGCTCAGGCCGCC GGCTGGAACAGCCGC  62 16
CL52_RS16840 3630392 .. 3630415 -  -9.4  -3.09933   GGCGAAGTGACGGAA          GTGGGCGGCC GTGC GGCCGCCCGG           GGGTATCAGGCGTGC  60 31
CL52_RS16835 3628739 .. 3628754 - -10.4  -5.61596   ACGGGCACAAAAAAA              GTGGGC TGAA GCCCAC               CCTACGAGGCAGCAG 100 205
        hppD 3627311 .. 3627340 -  -5.7  -3.65351   TCAGGCCTACCGAAA       CGCGTGGATGT-GC TTC GCGACATCCACCCT       ACGCAACCCCACCTC  57 51
CL52_RS16825 NONE
CL52_RS16820 3624986 .. 3624996 -  -4.6  -2.71712   CCGTGGGGTGGAAAG                 CCGC GCA GCGA                 TCTCCACCGGCTGCC  44 74
        maiA 3624256 .. 3624280 -    -7  -3.07816   CTGTGACGGATCGAA          CCCGCCGCGC TTGTG GCATGGCGGA          GTGGCACGCAAGGTT  51 49
CL52_RS16810 3622718 .. 3622737 -   -15  -5.24129   CGCGCCCATAAAAAA            CGCCAGCC CGAA GGCTGGCG             TCTGCTCGTCACGCG 100 47
CL52_RS16805 3620572 .. 3620607 -   -12  -3.15861   CAGTACCTTCATGAA    GAAACCTCCCATGGTCA TGT TGCCC-TGAGAGGTTTC    GACCGCAACCGGCCG  70 74
CL52_RS16800 3619827 .. 3619839 -  -6.2  -3.14564   CTATCTGTTCAGCAA                GCCG CTGTT CGGC                GCCTGCGCCAGTGCC  51 71
CL52_RS16775 3614070 .. 3614087 - -11.3  -3.93963   AGGACGAGGTAGAAA             CGATGCG CCGG CGCATCG              CCAGCCTGCGCCAGG  79 301
CL52_RS16755 3609695 .. 3609707 -  -6.9  -3.70902   GTGCCGAGATCGAAA                CCGCC GGC AGCGG                CAAAGAGGCGCTGGC  61 259
CL52_RS16735 3603555 .. 3603568 -  -9.5  -3.03159   CGAATGGCTGGAAGA               GGCGC TCGA GCGCC                GCGACGCACCCAGCT  57 108
CL52_RS16725 3602656 .. 3602666 -  -4.6  -3.64703   TGCCGCGCAGGCAAA                 GCCC GGC AGGC                 ACAGTGGGCGACTCA  55 38
CL52_RS16720 3602095 .. 3602105 -  -2.4   -3.5393   ATCACCGTTGCGAAA                 GCCG CTT CGCC                 CTTGACCGAGGTCAT  49 74
CL52_RS16715 3600645 .. 3600672 -  -5.5  -3.91911   GCCATGTCAACGAAA        CTCCTCGGCAG ATGACG CTACCGAGGCA         AGCCTAGACCAAAAG  62 97
CL52_RS16710 3598305 .. 3598316 -  -4.4  -3.91897   CTTTTGACTCACAAA                CACA GGGG TGTG                 TTGGTTGCGAGCGAC  58 58
        nosZ NONE
CL52_RS16700 NONE
CL52_RS16695 NONE
CL52_RS16690 NONE
CL52_RS16685 NONE
        tatA 3592362 .. 3592378 - -10.8  -5.76949   TAGCGGCAAAAAAAA              CGGGCC ATGAA GGCCCG              TTTCCTTGGCGCGGT 100 47
CL52_RS16675 3590931 .. 3590958 -  -7.6  -3.91798   GAACTTGGAAGGAAA        CTGTC-GCCCGGC TCA GCCGGGATGACCG        TCGACCCGCGCGCTG  68 10
CL52_RS16670 NONE
CL52_RS16665 3588861 .. 3588879 - -11.7  -3.71848   TCGGTTCATGAACAA             GCGCGAC CGGGT GTCGCGC             CTTGATGCGGTGGCC  78 108
        ccoN 3587248 .. 3587263 -  -6.1   -5.0133   TAGCCGGGTAAAAAA              GGTCC GTCCCT GGACC               ATCAGGAGCTACAAG  85 56
CL52_RS16655 3585589 .. 3585617 -  -3.7  -4.87786   GGAACTGCAGAAAAA        GCTCGACCTCG GCCTGCT CGATGCCGCGC        TGGTGCACCAGCCCG  79 463
CL52_RS16615 NONE
CL52_RS16610 NONE
CL52_RS16605 NONE
CL52_RS16600 NONE
CL52_RS16595 NONE
CL52_RS16590 NONE
CL52_RS16585 NONE
CL52_RS16580 3573641 .. 3573653 -  -3.3  -3.04144   CGCTGAGCCTGAACA                TCCCG CTG CCGGA                GGACACCGACATCTA  42 245
         zwf NONE
         pgl NONE
CL52_RS16560 3569826 .. 3569861 -  -5.3  -3.07816   CCTCCAGGTAGCGAA    TCGGGATGATCGCGG CAGGCC CCACGCCCACCGCGA     CGGGGTCGGACGGAT  47 40
CL52_RS16555 NONE
CL52_RS16550 3567186 .. 3567219 - -15.9  -2.88945   GGCAGCGACAACAAG     CCCCGCTCCGCCGCG AACG CGCGGCGCAGCCGGA      GGGTGGGAGCTGCGC  79 109
CL52_RS16530 3561502 .. 3561518 -  -5.1  -3.29511   GGCATGTCGTCAGAA              CGAGC CGCTGGT GCTCG              CGCCGGCGGCGGCCT  50 3
CL52_RS16525 3559132 .. 3559152 -  -3.2  -3.53012   CCTGGCTCCGGGAAA           CGG-TTGGC GCAC GCCATGCCG            ACCTGCTCGCCGCCG  49 185
        malE NONE
        malF NONE
        malG NONE
        malT NONE
CL52_RS16490 3548523 .. 3548543 - -11.1  -2.71712   CGTGCGGGCGTAAAG            GGCGGGC GTAGGCG GCCCGCC            GAGCGAGGGCGTAGA  63 58
CL52_RS16485 NONE
        malK 3545395 .. 3545422 - -13.5   -4.1552   GACCCCGGCAACAAA        GCCCCGAGAAC TGCATG ATTCTCGGGGC         TTTTCTTTGCGGAGT  93 209
CL52_RS16475 NONE
CL52_RS16470 3540522 .. 3540549 - -19.2  -3.48269   TCCACCAAATACGAA        GCCCCGAGACTC GAAA GAGCCTCGGGGC         TTTTTCTTTGCCGGA  95 471
CL52_RS16420 3528946 .. 3528960 -  -2.7   -3.5393   ATGACTTTCTCGAAA               CCACG GATTT CGGGG               AGTTAATGGCAGGTA  49 467
CL52_RS16395 3525966 .. 3525979 -  -4.5  -2.62263   ACCGGCTTCATACGA               CCTCC GTGC GGAAG                ACGTAACGCTTGTCG  41 4
CL52_RS16390 NONE
CL52_RS16385 NONE
CL52_RS21155 NONE
CL52_RS16240 NONE
CL52_RS16235 NONE
CL52_RS16230 3499956 .. 3499970 -  -6.4  -4.42386   TTCGCATCCATAAAA               CCACCT CAA AGGTGA               AAGCGTAGCCCATCG  76 49
CL52_RS16150 NONE
CL52_RS16145 3485392 .. 3485404 -  -3.4  -4.07568   CCTTTTTTGTCAAAA                TCAC ATGAA GTGA                AATTGTCCGGATGGA  58 120
CL52_RS16140 NONE
CL52_RS16135 NONE
CL52_RS16130 NONE
CL52_RS16125 3482643 .. 3482658 -  -4.6   -3.8709   AAAGTCCTCGACAAA              GGCTCC AACT GGAGCG               GTTCATGGTGGCAAA  58 219
CL52_RS16085 3472412 .. 3472431 -  -7.8  -3.40403   TGCCGTGCAGCAGAA            GGGCTACG CCTG CGTAGCGC             TGTCGCTGTACTGGA  59 199
CL52_RS16075 NONE
CL52_RS16070 3470697 .. 3470721 -  -2.8  -4.30576   GGTCTACGAGGAAAA         GGGCCAACGCA TAGT CG-GTTGGCGC          GAGCGTGCGGAAATC  66 466
CL52_RS16060 3468996 .. 3469017 -  -3.5   -2.5602   GAACGACTGAAGTCA           GCTGCGCAG CATA CCGTGCGGC            AGGCGCAGCTCGGTC  39 1
CL52_RS16055 3468354 .. 3468395 -  -7.1  -3.60098   ACCCGGCATGTTAAA GCATCCG-GCCCACGGCACC AGC GGCTCCGTGAGCTCGACGGC GGCTCGGCTCAGCGG  59 34
CL52_RS16050 3467220 .. 3467238 -  -3.1  -3.01712   TGGTGCTGGCCAACA            CCGGCCGA CCGT TCG-CCGA             GACCTTTGGCGAAGC  42 164
        mreB 3459991 .. 3460035 - -26.5  -4.39166   GGCTAGATACCAAAA CGCGACAAGCCGGAAGGTCGC GGG GCGGCCCTCCGGCTTGTCGCC GGGAAACGACTGCGG 100 44
        mreC NONE
        mreD 3458431 .. 3458470 -  -5.6   -4.2828   GCGCAGTGACGAAAA  GC-GCGGCGCAAGCCAGGC CCG GCCTAATCTGCGACACCGC  CGGAGCGGAACGGGA  71 50
CL52_RS16000 NONE
         rng 3456257 .. 3456273 -  -2.9  -2.62396   CACCCGCTCAGAGCA              GCACCAC GTC GTACTGC              TCCTGCGAGTACATG  39 1
CL52_RS15990 NONE
CL52_RS15985 NONE
        tldD 3449540 .. 3449566 -  -2.2  -5.00884   ATCTCGGTGAAAAAA         GCAAATCGCA GGTCAAG CGCGAACTGC         TGGCACTCCAGGAGC  79 502
        pmbA 3448005 .. 3448050 - -12.5  -3.63991   GATTACTTCGAAGAA GGCGAGTAGCCG-CCGCGCGGC ATA ACAGCGCGGACCGCTACTGACC GGCGATCAACTGCCG  77 31
CL52_RS15915 NONE
        mlaE NONE
        mlaD NONE
CL52_RS15900 NONE
CL52_RS15895 NONE
CL52_RS15890 3437051 .. 3437091 -  -3.8  -2.88564   ATCATACAAAAAACC CCGGAAGCTGCGAACC-CC GCCC GGCGGACCGCACCCGCCGA  TCAGTCGACAGCATC  44 26
CL52_RS15885 3436706 .. 3436728 - -11.3  -3.54129   GAGACCCCGTCGAAA          GGCGCCACGG CTTG CC-TGGCGCC           AAAGCTGTCTGTGCG  73 55
        murA 3435376 .. 3435394 - -13.1  -3.53012   GGCGGCCCGCTCAAA             GGCCCGC GCAAG GCGGGCC             ACGGCAATCAACCCG  76 33
        hisG 3434635 .. 3434651 -  -5.7  -2.54634   GCCTAGAGTACCAAG              GAGGCCG GGA CGGCGCC              TGCGCTTTTCGGCTA  46 72
        hisD 3433129 .. 3433139 -  -2.4  -3.58343   GGCATGAGGCGGAAA                 GCGC GTA GCGA                 TCTCCGCCAGGTGAC  49 74
        hisC 3431988 .. 3432026 - -13.9  -3.18912   CCAGCCAGCGAGTAA  GCG-CGCATGCGGCCCGGT GAA ACCGAGCCGCA-GCGACTC  AGGCGAGTGCCGACT  76 24
CL52_RS15855 3429830 .. 3429842 - -10.5  -2.52896   CGACGGGGCAATTGA                CGGCC AGC GGCCG                TTTGGACGCGGCCAC  59 124
        cysD NONE
        cysN 3426933 .. 3426952 -   -15  -4.22475   TATCCAAAACAAGAA            CGCCCTGC AATT GCAGGGCG             TTTTTATTACTAGCT 100 50
        pilB NONE
CL52_RS15825 NONE
CL52_RS15820 3421827 .. 3421843 -  -6.5  -2.84687   CGAAGGACGAGGAGA              CCCGCTT CAG AAGCCGG              CAAGCTGCAGATAGC  50 15
        coaE NONE
        yacG 3420916 .. 3420928 -  -5.5  -3.44527   CAGCGATGAGCACAA                GGACG ACC CATCC                CCACCAGATCAATGA  55 34
        rplM NONE
        rpsI 3418988 .. 3419013 - -14.7  -5.82316   AGCAGCTAAAAAAAA         CGCCCAGATCC TTGC GGAGCTGGGCG          TTTCTGATAAGCGTT 100 43
        petA NONE
CL52_RS15790 NONE
CL52_RS15785 3416112 .. 3416137 - -13.9  -5.55664   CGATGACCAAAAAAA         CACGCGCGCCC ATGA GGGCGCGCGCT          TAGGTACCGCTTGCG 100 52
CL52_RS15780 NONE
CL52_RS15775 3415006 .. 3415030 -   -10  -3.09759   AATACATCGACTGAA         GGCGGC-GGCA GCAC TGCCAACCGCC          GCAAATCTCACTTGA  62 33
        rsmI NONE
        rnpB 3409928 .. 3409940 -  -3.3  -4.08706   TGCGCACTATAGAAA                TGCGG CTG CCCCA                CCGTCAAGGCACGCC  58 224
        mraZ NONE
        rsmH NONE
        ftsL NONE
CL52_RS15730 NONE
CL52_RS15725 3404979 .. 3404989 -  -2.4  -2.71364   GCATCGCTTCAAGCA                 TGGG ATG CCCT                 CCAACGCGCAAGCGC  39 8
CL52_RS15720 NONE
        mraY NONE
        murD 3401164 .. 3401184 -  -3.1  -3.14132   GGCGTTGCGCAGGAA            GGCGAGCAT CAG ACGAGCGCC            TCCACCGCTGCGGCG  44 13
        ftsW NONE
        murG NONE
        murC NONE
CL52_RS15690 NONE
CL52_RS15685 NONE
        ftsA NONE
        ftsZ 3393077 .. 3393088 -  -2.2  -3.29043   AAGTGGCGGCGATAA                TAGC AGAT GCCA                 CCTTTGCTGAATACT  45 70
        lpxC 3392066 .. 3392081 - -10.4  -5.78622   CCAGGGTAAAAAAAA              GCCACC CGAA GGTGGC               TTGAAAAACTAGGAA 100 53
CL52_RS15630 3385656 .. 3385689 -   -11  -3.34344   GCAGGCGCGAATCAA     GGCGCTGCGCCTGCT GCAGG AGCCGACGCAG-GCC     TGACGATCAGGCGTG  69 32
CL52_RS15620 3383298 .. 3383315 -  -9.1  -4.08945   ACCAGTGCTCGAAAA             CAGGCGC AAGC ACGCCTG              CCAGCTGTCGGAAGG  76 207
         mqo 3381616 .. 3381658 - -22.9  -3.22208   ACAACGAACACGCAA CGAAAAAGCCGCCTGGCAC GCTGA GTGCCAGGCGGCTTTTGCA ACAGCGCGAGACCCG 100 43
CL52_RS15605 3380638 .. 3380655 - -14.1   -5.4833   CGACGCAACAAAAAA             GCCCGCC AAAT GGCGGGC              TTTTTCATTCGACCG 100 44
CL52_RS15595 3378446 .. 3378459 -  -5.9  -3.03124   TGCGATGTGGGAAGA               GCGCG ATGA CGCAC                TGCAGGTGCCGACGG  49 213
CL52_RS15585 NONE
CL52_RS15580 NONE
CL52_RS15575 3376190 .. 3376211 -  -7.1  -3.54475   CCGGCGAGCAGACAA           CCGCTGCGC ACCC GTGCCGCGG            CAGGCCACTCAGTTG  59 34
CL52_RS15570 3375249 .. 3375279 - -14.1  -2.58544   CTCGACCTGGAGAAC      GCGCGCC-TGCAAC TGGG GTTGCACAGCGCGC       TCGGCGACGGCCTTT  69 67
CL52_RS15545 3371166 .. 3371178 -  -4.7   -3.3334   AACGCCACTCTAGAA                CGGGC CGC GCCAG                GGCAAACCGGCGGAT  50 63
CL52_RS15540 3369328 .. 3369372 -  -5.7  -4.25848   AATTGCCGATGAAAA TGGCGGCGGCCGAAGCTGGTT TCAAT AGCCAGCT-CG-CCGCCTGCA GCAGGTCGGCGCCCG  71 92
CL52_RS15535 3368576 .. 3368595 -  -2.7   -2.6914   GACCGGGCACACAAC            GCACCGG CCAGGC CCAGAGC             TTACCACCCGCTACC  39 77
CL52_RS15530 3367873 .. 3367883 -  -6.8  -4.13767   CTCGCCAGGTCAAAA                 CGCT CAG AGCG                 GACGGAGATTGATCT  69 18
CL52_RS15525 3363967 .. 3363977 -  -2.4  -3.21962   ATACCAGCAAGGCAA                 TGGC TGC GCCC                 CGGCTGGGCGCTTAG  43 63
CL52_RS15520 3361353 .. 3361385 - -11.2  -4.12902   CAAGCACCCGGAAAA     GCGCGGCGAGGACCT GGCC ACGACC-CGCCGCGC      CTGCGAGCGTTACCG  81 444
CL52_RS15500 3356516 .. 3356541 - -16.9  -4.72272   CCTCCTCACGAAAAA         GGCGCTCCGGT CGCA ACCGGAACGCC          TCCTTGACCCGCACG 100 72
CL52_RS15495 3355938 .. 3355959 - -12.9  -2.82933   TCGGAAGCGAGCATA           TGGCCGCCG GCAT CGGCGGCCT            ACGACCATCAGCCAG  70 77
CL52_RS15490 3354599 .. 3354609 -  -8.2  -3.53224   CACCGCCGGCGCAAA                 CCGG CAC CCGG                 CTGTTCTTCCGGGCG  63 156
CL52_RS15455 NONE
CL52_RS15450 NONE
CL52_RS15430 3346390 .. 3346421 -  -5.8  -3.41569   TGAGGCACGCAAAGA      GTTCGCCCTAGTCCG GCC CGCACT-GAGCGACC      GACTCGATGCCCAGC  55 1
CL52_RS15425 3345014 .. 3345029 - -10.4  -3.30124   CCGGAGCCGCCAGAA              TCGCGC CGTG GCGCGA               CCGCGACGCCTCTAG  66 37
CL52_RS15420 3344346 .. 3344365 - -16.4  -5.03314   CCCAGGTGCAAAAAA            CGCCCGGC AGTC GCCGGGCG             TTTTCGTTTCTACAG 100 35
CL52_RS15410 NONE
CL52_RS15405 3340513 .. 3340550 - -20.1  -3.62224   AGAGTCTGCGAAGAA   CCTAGAAAAAGGGGCTC CACG GAGCCCCTTTTTCTACG    CCGGAGCTTCGTTGC 100 21
CL52_RS15400 3338821 .. 3338838 -  -4.7  -3.72576   GCCGCTGCGACGAAA             GCACCGC GCTG GCGGCGA              TGTACACCGCCAACC  55 400
CL52_RS15390 NONE
CL52_RS15385 3336725 .. 3336756 -  -9.5  -3.06796   GCTCATGTCATCGAA     TCCC-TGGCCTACGG CGCA CCGC-GGCCACGGGA      CGATCCGTCAGCGAC  60 33
CL52_RS15380 3336280 .. 3336291 -  -7.2  -3.72893   TACCTGGCGATGAAA                CGCG CCGG CGCG                 CTCTGAGTCACTGCT  65 39
        sbcB 3327581 .. 3327606 - -14.1  -3.25169   GGAAGAAGCCATCAA         GGAACTTCAGG AGCG CCTGAAGTCCC          TCTCGGCAGATGACA  75 396
        purU 3326332 .. 3326342 -  -4.6  -3.14878   GCCGTCAATTGAAGA                 CCAG CGT CCGG                 TTGCTGTGGACCAGC  48 4
CL52_RS21370 3326114 .. 3326144 -  -3.1  -2.78463   ATCCCCCTGATCAGA      GCGTGCGC-AGGTC ACTC GGCCTCGCGCCGGC       GCTGCGCCTGCAAGG  40 6
CL52_RS15335 3324508 .. 3324519 -  -7.2  -4.07687   AGGTGCGCCCGAAAA                CGCC GAAA GGCG                 TGAAAATGGTGCTGA  70 147
        dmeF 3318747 .. 3318769 -  -3.5  -2.97059   GCAAAACATATGACA          GGCAAAT-GA CTTT TCGATTCGCC           GGCGTCTTTCCCCTC  43 39
CL52_RS15305 3317121 .. 3317176 - -19.6  -2.53876   CCGCAGTGTAACGCA GCTGGAAGGCCGAAGCTGGAGGCCGA CGAG CCGGCCTCTAGCTCCGGCCGCCCCTC CTACATGTGGGCCTC  90 26
        moaC NONE
CL52_RS15295 NONE
        moaE 3315728 .. 3315744 -  -5.1  -3.34089   CTTGAACAAGGAATA              CGACATG CAG CATCTCG              ACTGGCTGATCTTGC  51 189
CL52_RS15270 NONE
CL52_RS15265 NONE
CL52_RS15260 NONE
CL52_RS15255 3307811 .. 3307823 -  -3.3  -3.03007   AACATCGTCGGAACA                GCCTC GAA GAGGG                GAGCAGTCGGGGGCG  43 127
        purL 3303852 .. 3303884 -   -15  -4.67353   GCAGGCACGCAAAAA     GAAGGCCCGG-TGCA TAGC TGCAGCCAGGCCTTC      TCTACCCTCGTTTGC 100 45
CL52_RS15245 3303201 .. 3303213 -  -4.7  -3.24245   GCATGCACAAGCCAA                GGGAG TGC CGCCC                GGCGACATGATCATG  49 199
CL52_RS15230 NONE
CL52_RS15225 3300975 .. 3301004 -  -7.1  -2.53263   CGCACGGCGAAGCGA       CAGGGCG-CCGCTC AGT GATCAATCGCCCTG       CTCCGCCAGTTCGCG  48 14
CL52_RS15220 NONE
        purT 3299504 .. 3299550 -  -3.4  -4.10855   AAAATCGCGTGAAAA GCGTGCGAGCCTGGCCGGCCGA GCA TCCTCCAGCCGAGCCCGAAGAC GCTTAACCCAGGCCC  61 61
         ffh 3295815 .. 3295827 - -10.5  -3.38581   AGCAATCTTGAAACA                GGGCC CGA GGCCC                GAAAGGCCGCACATT  66 114
        rpsP NONE
        rimM NONE
        trmD 3294189 .. 3294203 -  -2.7  -2.52464   TGTGCTCCTAAGGCA               GGCCG GTCTG CGGCT               GCCATCGATACGTTA  37 43
        rplS 3293784 .. 3293799 - -10.4  -5.81032   GAAGGCTAAAAAAAA              GCAGCC CGAA GGCTGC               TTTTTTTGGAAGAGG 100 47
        xerD 3292738 .. 3292761 -  -9.6  -2.80994   TCCAAGCCTACCACA          GCGCAACATC GCGA AATGCTGCGC           AGGTCGCTAGCCGCG  57 32
        dsbC 3291858 .. 3291878 - -14.7   -3.1355   CCCATTCACAGCGAA            GCGGCTGGA GCC CCCAGCCGC            AAAAGGATTCGCACA  80 110
CL52_RS15165 NONE
        thrC 3289001 .. 3289020 - -13.6  -4.27316   CCTCGCAACGCAAAA            GGCCCATC GTTC GATGGGCC             TTTTCGTTTTCGCCG 100 52
CL52_RS15145 NONE
CL52_RS15140 3284836 .. 3284866 - -16.9  -3.70149   TTCAGAGCACGGAAA       GCATGACCCCGGC TCGTG GCCGGGGTCATGG       TCAGGCTAGCGGTTA 100 49
        gloA 3284159 .. 3284176 -  -8.3  -3.28712   GGTTTGCCGCTATAA             GGTGCGC CAAA GCGCCCC              ATCGCCTTGGAGTGA  60 260
CL52_RS15090 3276469 .. 3276481 -  -4.7  -4.07568   GGCCTTTCTGGAAAA                GCGTG AAC CGCGC                TGGCGCAATCGCTAG  63 52
         ung 3273272 .. 3273302 -  -6.8  -5.00884   AGTTCGCCGAAAAAA       TGCTACCCACGCTC GAG GAGCATCTGCAGCA       GGCCAAACAACTCCA  87 81
CL52_RS15055 NONE
CL52_RS21525 3269816 .. 3269828 -  -4.8  -3.08464   CCAGCACCGAGTGAA                GCTG CTGCT CAGC                GAGATCGACGAGTTC  47 195
        rpoE NONE
CL52_RS15040 NONE
CL52_RS15035 NONE
CL52_RS15030 3265416 .. 3265430 -  -4.2  -4.18494   TATCGGGACCGAAAA               TGTCGG CCC CTGACA               GGTGGAACAGCTAGA  63 36
        lepA NONE
        lepB 3262129 .. 3262153 -  -2.7  -2.74322   GCGAACGCGCGAAAC          TCATGTCGACC TCT AGTCGTCTCGA          TACCCACCCAGCGGG  39 95
CL52_RS15015 NONE
         rnc NONE
         era NONE
        recO NONE
        pdxJ 3258629 .. 3258641 -  -6.2  -2.50994   CGCAACCTCACCAAT                CGGG GCCTG CCCG                CCACGCGCCGCGTGT  45 67
CL52_RS14980 3256927 .. 3256971 -    -7  -3.32844   GGTCGCACCGTAGAA GGGC-TGCCGGCCCCCATGCGC GCA GTGC-TGTTGGCCCGCAAGCCC TGACGCCTGATGCGG  55 57
CL52_RS14955 3251280 .. 3251295 -  -2.4  -2.58812   CGGAAACGGAATGTA              GAGGCA GGCG CGCCGC               GCGATCTTGCGAAAA  38 124
        putA 3247874 .. 3247901 -  -2.7  -2.78384   TGTTGTTCGATGAGA       CCG-CGCTCATCT TGGC AGAGG-GCGACGG        CTAAGGCGCCATCAC  39 141
        putP 3246318 .. 3246334 - -15.1  -5.40004   GACGAAACGAAAAAA              GCCCCGC CAA GCGGGGC              TTTCTGTTGCGCGGC 100 47
CL52_RS14935 3243640 .. 3243660 -  -4.5  -2.89564   GCGGCAGCCGATACA            GCCCGACCG ATC CGCCCGGGG            TCAAGCAAGCCCTCG  44 237
CL52_RS14915 3239309 .. 3239338 - -11.4  -2.73681   CACCGAGTCCAAGCA       CGCGCAC-CCGCC GTACA GGCGGCGTGCGTG       GCTGTCCAGGAATCT  63 488
CL52_RS14910 3238460 .. 3238479 -  -7.8  -4.15044   GCCGCGTTGAAGAAA            GACACCGC AAAT GCGGTTTC             CGCGACCGCAGATAC  72 54
CL52_RS14905 NONE
CL52_RS14900 NONE
CL52_RS14895 NONE
CL52_RS14890 NONE
CL52_RS14885 NONE
CL52_RS14880 NONE
CL52_RS14875 NONE
CL52_RS14870 3232912 .. 3232935 -  -2.2   -4.2828   CTCCAGTGAGGAAAA          CCTCCTTCAC TCCC GTGCCGGCGG           CCACTGCTGCGCGGC  62 8
CL52_RS14865 3232641 .. 3232658 -  -3.3  -3.05715   AAGGCCGTCAGTCAA             CAAACCG CAAT CGGCGTG              CGCCCGGTTTGTCGG  43 65
CL52_RS14860 NONE
CL52_RS14855 NONE
CL52_RS14850 3230636 .. 3230646 -  -3.2  -2.78384   GGCGGGGCCAGGAGA                 TGCC GGC AGCA                 AGGAAGCCGATTGAT  40 249
CL52_RS14845 3228417 .. 3228461 - -14.2  -2.77899   TTCGTGGAGCAATGA CCTTCTCGCCCCGTC-GCCCG ACGG CGGGCAGACGGGGCGCGCACA CCGTTGCAGAAGGAG  75 124
CL52_RS14840 NONE
CL52_RS14835 3227048 .. 3227083 - -16.3  -2.70525   TCCTGCGAAAGGAAG    GAGGGACATG-GCCCC GAACG GGGACGCATGTCCCTC    GTGGGGTGGGATGAA  81 66
CL52_RS14830 3226123 .. 3226142 - -10.7  -4.40561   TTCCGCGAAAAAGAA            GAGCCCC GACGTG GGGGCTC             GAATGGGTTGCGGGT  95 40
CL52_RS14825 3225031 .. 3225061 - -12.5   -4.2558   CAGGGGGCAGGAAAA       GAGGCTTCCCGCC GCGAG GGCGGGAAGCTGC       TGTGAGATCAGTGCC  95 33
CL52_RS14820 3224607 .. 3224625 - -17.4   -3.6761   TGCCGGGAAGAAAGA             GGCCCCCG GAG CGGGGGCC             AGGGATGGGCGGTCA 100 38
CL52_RS14815 3223714 .. 3223737 - -13.9   -2.7535   CGGGCGAAGAGAGGA          CAAGGCCCC GAGGAT GGGGCCTTG           CGGATCAGAACGACT  72 30
CL52_RS14810 3223005 .. 3223042 - -13.3  -4.15044   GTCTCCTTGAAGAAA   TGGCCGGAGCCCTCCCC GTCG GGGGAGAACCCCGGCGG    GTGGCGGAATGCCGC  89 58
CL52_RS14805 3222558 .. 3222592 - -12.8  -3.66908   CCTCTTGAAAATGAA     GGAGCAACCACAGCCC GCG GGGCCATGCTCGCCCC     GGTTGGGTGGAAGGA  77 53
CL52_RS14800 3221847 .. 3221875 - -12.3  -3.10164   TGATGGATGAGGGAA        GGCGGGCACGCGC GGC GCGCATGCCCGTG        GGGATGGCTCACGCC  68 34
CL52_RS14795 3220631 .. 3220665 - -17.8  -3.61398   CTCCTTCTGGAAGAA     GGGGCCACGGCACCCC ATC GGGGCGACATGACCCC     GGTGGGTGGATGAAA 100 69
CL52_RS14790 3220209 .. 3220249 - -25.5   -3.2614   GATGCTCCAGAGCAA  TGGGGCATGTCACCTCCCC CAC GGGGCGGTGACATGCCCCT  GGGTGGGAAGAAAGA 100 78
CL52_RS14785 3217885 .. 3217904 - -16.4  -3.80855   TGCTGTAAAAAGGAA            GCGGCCCC CGAA GGGGCCGC             CAAGTTCAGCAACGC  93 41
CL52_RS14780 NONE
CL52_RS14775 NONE
CL52_RS14770 NONE
CL52_RS14765 3212864 .. 3212888 -  -3.4   -3.0263   AGCAGGCGGCGAATA         GCTCGGCGCTG CACT CTGCGCGG-GC          GGTGAGTAGGCGGGA  43 378
CL52_RS14755 NONE
CL52_RS20365 NONE
CL52_RS14745 NONE
CL52_RS14740 NONE
CL52_RS14735 NONE
CL52_RS14730 NONE
CL52_RS21360 3205748 .. 3205769 -  -7.2  -3.57119   TATAGAGGCTGGAAA           GTGCTGCC GGGGCT GGCAGCTC            GGTGGGAGGCAGGGC  62 74
CL52_RS14725 NONE
CL52_RS14720 3204351 .. 3204377 -    -3  -2.79098   GGCAGCGAGCAACGA         CCGCAGGA TCATGGCGACC TCCTACGG         CACCGCGACGCGCTG  40 20
CL52_RS14715 NONE
CL52_RS14710 NONE
CL52_RS14705 NONE
        traD NONE
CL52_RS14695 3199551 .. 3199562 -  -2.2  -4.11773   AAAGACTTCGTAAAA                CGCT ACGA AACG                 CACTGGGCAGATTGC  58 60
CL52_RS14635 NONE
CL52_RS14630 NONE
CL52_RS14625 3180648 .. 3180663 -  -4.6  -2.52464   GGGTCTCCGAAGGGA              CGGCCA TCGC TTGCCG               CCCTCACAGCACGCC  43 29
CL52_RS14620 NONE
CL52_RS14615 NONE
CL52_RS14610 NONE
CL52_RS14605 NONE
CL52_RS14600 NONE
CL52_RS14595 NONE
CL52_RS14590 3173050 .. 3173064 -  -8.5  -3.14211   ACGGGTTTCGATCAA               CGCGG ACGAG CCGCG               CCGCAGCCTTGAAGA  58 48
        radC 3172365 .. 3172394 - -17.9  -3.05343   TGGATAGGGGCAAGA       CGCAAGGCGCCCCC GGA AGGGGCGCCT-GCG       GACTACAACAAGCCG  90 28
CL52_RS14580 NONE
CL52_RS14575 3168732 .. 3168751 -  -4.3  -3.37612   CTCAAGTTCAATGAA            CTCTCTGC CCAGT GCAG-GAG            GTGCCTCATAGGGGA  48 44
CL52_RS14570 3168023 .. 3168040 -  -3.3  -3.87994   ATCTAGCGCGACAAA             GAAACCG CATC CGGCCCC              TGCCGGTTTCATACC  56 87
CL52_RS14565 NONE
CL52_RS14560 3166584 .. 3166596 -  -5.5  -3.83026   GTTCCTCACATGAAA                TCGAC GCT GCCGA                GGAAGACCTGGCCAC  62 3
CL52_RS14555 NONE
CL52_RS14550 NONE
CL52_RS14545 3162784 .. 3162798 - -12.8  -3.07113   TACGACCCGAGCCAA               CCCGGC TCT GCCGGG               CGCAACCCGCCCTCC  71 495
CL52_RS14535 NONE
CL52_RS14530 NONE
CL52_RS14525 3158701 .. 3158733 -  -5.6  -4.57837   ACACCCCGGGAAAAA     CTGCCC-ATCTGGCC CAAC AGCCAGATCGAGGAG      CTGTTGCCCCTCGGC  76 256
        nahR 3142658 .. 3142670 -  -5.5  -3.14132   GTCGGCCCGCATGAA                CGGAC ATG ATCCG                TATGCCTATCTCAAG  51 174
CL52_RS14435 3141168 .. 3141184 -  -3.6  -2.62616   CCATTTCCCACATTA              CAGGCG CACCT CTCCTG              TATTCGCCAGTAAAT  39 6
CL52_RS14430 3139753 .. 3139768 -  -6.1  -3.40899   AAGCCCGCATCACAA              CCAGG TGCCGC CCTGG               CGTTCATCCGGCTCG  55 4
CL52_RS21515 NONE
CL52_RS14415 NONE
        tnpB 3137553 .. 3137570 -  -4.1  -3.14931   TTGACGTGCCAGCAA             CACTTGC GACA GCAACTG              TTTGAGCGCGTCGGG  47 93
        apbC 3117493 .. 3117510 - -14.1  -3.96148   TTCGGCTAGTAGAAA             GCCCCGC TCAT GCGGGGC              TTTTTCGTTTCTGCC  86 86
         dcd 3116314 .. 3116346 -  -9.8  -3.17075   GGCGCGTGAAGCCAA     GTGCATGCCGGCGGC CTTC GCC-CCGGCATGCGG      CCCTACCGCCACGCA  64 62
CL52_RS14290 NONE
        atpD NONE
CL52_RS14280 NONE
CL52_RS14275 NONE
CL52_RS14270 NONE
CL52_RS14265 3107601 .. 3107611 -  -2.4  -3.05844   TTGTCCATGGCAAGA                 CTCC GAG GGGG                 TTGTTCAGTCGCCGC  41 30
CL52_RS14260 NONE
CL52_RS14255 NONE
CL52_RS14250 NONE
CL52_RS14245 3103915 .. 3103935 -  -6.8  -3.63922   AGGCGCTGGAAAATA           CCCCGG-CG GCGC CGACCGAGG            CGCTGCGCCTGGCCG  61 323
CL52_RS14220 NONE
CL52_RS14215 NONE
CL52_RS14210 NONE
CL52_RS14205 3097205 .. 3097228 -  -7.4  -3.64703   GGGTCCGGATCGAAA          GGGCCG-CGCA GTT TACGTCAGCCC          CGGCGCCATTGCAGG  62 101
CL52_RS14200 3095874 .. 3095910 -  -5.8  -2.57931   GCCATGGCGTAGAAC   CTCTCCCGGCTA-TAGG TGGA CCTGGCAGCCGGACGAG    CCGGCCCGCTTAACC  46 35
CL52_RS14195 3094907 .. 3094919 -  -6.9  -3.16564   GGCTGACGCCAGCAA                CACCG GGC CGGCG                CCTCGCTGTTTCCGC  53 67
CL52_RS14185 NONE
CL52_RS14180 NONE
CL52_RS21340 3090790 .. 3090806 - -13.7   -5.1356   CTGGATCAAGAAAAA              CCGGCCT CTG AGGCCGG              TTTTCGGGTTGTTTG 100 60
       fadD2 3087906 .. 3087923 -  -2.6  -4.12188   TTAGCAGCTTTAAAA             CAGGCC GAACAG GGCCTC              AGAAGCCCCATACAG  59 96
       fadD1 3086045 .. 3086083 - -20.5  -3.63569   GTAATCCGTGAAGAA   CCAAAAAAAAGCCCCGC GGCAT GCGGGGCTTTTTCCTGG   AACGACGGGGTTAAG 100 36
CL52_RS14150 3082690 .. 3082723 -  -2.4  -2.68942   ACTGTCCTAGACAAG     TTGATGG-GTAGGCC GCACA GGCATACACCACCAT     TCCCCGCGGACAGCC  39 195
CL52_RS14145 3080984 .. 3080996 -  -5.5  -2.72379   GCAATCTGTGAAGGA                CGCGA TTG TCGCA                GATTGCCAGGCTGGC  46 97
        hrpA NONE
CL52_RS14135 3076224 .. 3076250 - -13.7  -3.53091   AGCTGCTCGCCGAAA        CCGTGGCCGGCG CACT CGCCAGCC-CGG         CCCTGGCCTAGCCCT  79 39
CL52_RS21640 3071911 .. 3071927 -  -4.4  -2.78934   TTACAGAGGGGAAAG             GCG-CTC AGTA GAGGCGC              TTTTCGATATCGACA  42 13
CL52_RS14115 3070799 .. 3070818 -  -4.8  -3.28712   GCCGGTGCGCGACAA            GGCGCAGG CTGT CGAGCGCC             TGCAGGCGGCGCGCG  49 515
CL52_RS14105 3069052 .. 3069066 -  -2.1  -2.91842   GCAGCTAAAAAAACT              TCAGGC TCAG GCC-GA               TGCGGATGGATATGA  40 514
CL52_RS14090 NONE
CL52_RS14085 3064065 .. 3064080 -  -2.4  -3.22777   TGTTACACAGCAAGA              CTCGCC CGAT GGCATG               GGATAATTGGCTACG  44 446
CL52_RS20750 3061934 .. 3061951 -  -5.5  -2.70932   GCCTCTCCTGAATCA             TCGCCCA ACGC CGGGCAA              TACTAAGCTCGCGCC  46 5
        thrH 3060931 .. 3060942 -  -7.2  -3.14132   GCCGGGTCGGACGAA                GGCG TACT CGCC                 GATGCGGCGCACGAT  56 385
CL52_RS13955 3036040 .. 3036072 -  -6.8  -3.53012   GCGCGGTCCGGCAAA      GGCCTGTGCGGCCG CGCAC CGGGTGCTCAGACC      GGCGGCTCGATCCCC  57 19
CL52_RS13950 3033916 .. 3033938 -  -9.1  -3.62644   GCCACAACGACACAA           CCGGCCG GCGCGCTAG CGGCCGG           TCTGATCAAGCGTCT  68 15
CL52_RS13945 NONE
CL52_RS13940 3031995 .. 3032029 -  -2.1  -4.25104   GCGCTTGCAGCAAAA    CATGACGGGCTCCTGC GGAT ACGGGAAGCC-TCATG     CTCGCCGGCCATGCA  62 44
CL52_RS13935 3031319 .. 3031342 - -15.3  -2.62263   AGGTCGCCGAGACCA          CAGCGGCCG CGGCAC CGGCCGCTG           CACCGGCCTGAGTCA  77 38
CL52_RS13925 3029218 .. 3029229 -  -7.2  -3.60792   TGGTGAACTGCGAAA                CGGC CTGA GCCG                 GATGCCGGAAGGCCT  62 177
CL52_RS13900 3025330 .. 3025351 -  -5.1  -3.08642   AGAGGAGCGATCGAA           TAGGCTTCA TGAC CGCAGCCTA            CGAACCCGGCCAGCG  47 92
CL52_RS13895 NONE
CL52_RS13890 NONE
CL52_RS13885 NONE
CL52_RS21245 3020851 .. 3020867 -    -5  -2.71791   ACTCCCTTCGTAAAG              CGCGGC CGATT GCCGCT              TCGCTGAACCGACGA  44 74
CL52_RS13870 3020156 .. 3020170 -  -5.6   -3.9644   TTCCGAAGACAACAA               GCGCCT GGA AGCCGC               CCTGGGCCAGGAGCT  63 261
CL52_RS13860 3017855 .. 3017869 - -11.4  -2.82516   CCGCCGAGGAGCAGA               CCTCGG TGT CCGAGG               AGATCAGCCGCAGCG  63 196
CL52_RS13845 3012325 .. 3012353 -  -6.7  -3.62522   CAACGTGGTCAACAA       CGCAGCCGCGGCG GTACT CGCCGCG-CCG-G       TAGCGATCAGCCTGG  61 299
CL52_RS13835 3009741 .. 3009780 -  -4.3  -3.27298   GGGCGCAACCATGAA CATGGACGGCA-CCGCGCTC TAC GAG-GCGGCCGCCGCGC-TG TTCGTCGCCAACCTG  49 311
CL52_RS13820 3006398 .. 3006416 -    -3  -2.69601   CCGATACGAAACCTA             TCCGTGCC GTA GCCACCGA             TGTCTCCTCCCGTGA  40 51
CL52_RS13815 3005636 .. 3005678 -   -14  -2.66755   AAAGCGAAAATATAG CCGATTGCCAGCATGCGGCA TAA TGCCGCCGGCCGGCGATCCG AAACGTCGCTCAATC  71 35
CL52_RS13810 3004226 .. 3004240 -  -2.7  -3.53091   ACGCCCGGGGGCAAA               CGCCG CTGGC CGGTG               CGGCCTTCAAAGGCG  49 293
CL52_RS13800 3003079 .. 3003113 - -10.7  -3.86031   GCAATGAACGAACAA     CTGGCAGAGCTGATC CGCCT GATCAGCTCCGGCTG     CATGACCGAAGCCGA  77 507
CL52_RS13790 NONE
CL52_RS13785 3001208 .. 3001227 - -13.6  -4.19735   GGTCTGAAAATGAAA            GGAGCGTC GAAC GACGCTCC             CGGTTTGGCAGGCTA  93 52
CL52_RS13780 2999604 .. 2999621 -  -9.1  -3.07113   GACGAGCGCAGCGAA             GCCAACC GGGT GGCTGGC              TGCGAAAGCCAGGTC  57 303
CL52_RS13750 NONE
CL52_RS21240 2995603 .. 2995630 -  -7.6  -3.02144   GGAGCTGTTCGAACA        GGAGCACGTCAC TGTG GTGCCAGGCTCC         TATCTGTCGCGCGAG  53 182
CL52_RS13720 NONE
CL52_RS13715 NONE
         hda 2988216 .. 2988232 -  -2.9  -3.14132   GCGGCGCGTTACCAA              CCCAATG TCT CTTTGAG              AAAGGGAATCGTCAG  44 2
CL52_RS13705 2987200 .. 2987224 -  -6.3  -3.95022   TGGACGAACACGAAA          TCACCCTGTGC CGG GCACTTGGCGA          ACGCCTGGCCCGTAC  64 524
CL52_RS13685 NONE
CL52_RS13680 2984306 .. 2984332 -  -5.9  -3.62597   CGCATTGTTCAACAA        GCCACGC-TCGT GTTG ACGACGCATGAC         GGCAAGGTGGCCGAA  59 335
CL52_RS13670 2983384 .. 2983399 -  -6.1  -3.53091   ATGCCGTTCTGGAAA              GCCGA GCTCGG TCGGC               CGCAGGATAACCTGA  56 217
CL52_RS13645 NONE
CL52_RS13640 2977657 .. 2977668 -  -3.6  -3.53444   CGAGCGCCGGCGAAA                CGGC CGGC ACCG                 AAGGCCCTCGGGAAA  49 267
        aspS 2974517 .. 2974556 -   -12  -3.28712   TCTCCCTCTCTAGAA  CGCTGTTGGCGCCGGAGC CAGG GCCCCGGCGCGACCATCA   CTCTGCTTTCGGCTG  72 23
CL52_RS13620 2973704 .. 2973738 - -15.7  -4.38748   CGTACAAACAAAGAA     GCCGGAAGCCCCAGG GGGTG CCTCCGGCTTCCGGC     AGCGCGACCACTCAG 100 37
        ruvC 2973082 .. 2973100 -  -5.2  -3.30124   GCCGACGTTCTACAA             CCGCAG ACGGCCA CCGCGG             CGCTTGGCGCTGGCG  50 1
        ruvA NONE
        ruvB NONE
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB NONE
         pal NONE
        ybgF 2966016 .. 2966038 - -14.9  -3.53031   CGCATTGTAAAGCAA           GAACCCGCC TGGGT GGCGGGTTC           TTTGGCGAACAGAGC  83 42
        queE NONE
        queC 2964537 .. 2964547 -  -8.2  -2.75712   CGACTGAGCTAACGA                 CCCG ATG CGGG                 CGCATGATACGGATT  54 68
CL52_RS13555 2964419 .. 2964440 - -14.5  -5.64274   GCAGCTATAAAAAAA           CCGGAACTC ACTG GAGTTCCGG            TTTTTTGCTCCCAGA 100 49
CL52_RS13550 2962737 .. 2962760 -   -21  -5.54907   GCCAGAAAAGAAAAA          GGCCCGCCGG TTCC CCGGCGGGCC           TTCTGTCAGATCACT 100 36
        nadA 2960998 .. 2961008 -  -6.8  -3.29144   CGACCTCTTCTACAA                 CCTG GCC CAGG                 TTGAACTGGAGATGA  54 484
CL52_RS13535 2959485 .. 2959516 -    -5  -3.90241   GATCAAGCAGAAGAA      GCTCTACGGCAAGG AATA CCTGGGCATCGAGC       GCAGCACCTTTCTCA  61 150
        dapA NONE
        bamC 2956343 .. 2956370 - -13.4  -3.68024   GTTTCGAAGAGATAA        GGGTGACGAGGC CAGC GCGCCGTCACCC         CTGGGTTTGCGCCCG  84 50
CL52_RS13510 NONE
CL52_RS13505 2955175 .. 2955203 - -16.1  -4.73108   CCCAGAAAAGCAAAA        GCCCCCGAAACTC TAC GAATTTCAGGGGC        TTAGGCACTATGTAA 100 41
        fdhF NONE
CL52_RS13425 2937919 .. 2937945 -  -4.9  -5.52986   ACGCGATGAAAAAAA         GGCGGGCAGCC GCAGG GGCGGCCAGGC         CACGTCCGTGGGCTG 100 185
CL52_RS13420 2936650 .. 2936670 -  -5.3  -3.34192   AAGGTGCGCAAGGAA            CTGCGCC GCTGGCT GGCGCGG            CTGCACGAGGACGTG  51 489
CL52_RS13390 2931706 .. 2931733 -  -5.4   -4.1899   GGATGGCATGGAAAA        CGCGCG-GTCAGG CAA CCAGGCGCGCACG        TTGTTCGATCAGTCG  65 5
CL52_RS13385 2930942 .. 2930976 -   -33  -4.98531   GGCGCAAACGAAAAA     GGCCGAAGGGCGCGCG TGA CGCGCGCCCTTCGGCC     TGGTCAAAACGGCAC 100 84
CL52_RS13380 2928462 .. 2928473 -  -5.8  -3.28712   CGCGCTCGCTCAGAA                CAGC TCCA GCTG                 GCCGTCGATCAGCGA  52 8
CL52_RS13375 2927920 .. 2927970 -  -8.1  -3.14881   GAACTGGCTGACCAA GCGCCGCCGCGTGCGGGTCGAGCCC TGG GTGCCGGACC-GC-CGCAGCGCCGG CGAACGCCTCTGGAA  54 160
CL52_RS13345 2921501 .. 2921512 -  -7.2  -2.86271   CGGGCAGTATAACGA                GGCG CCGC CGCC                 AGGTCAGACCCGCTG  53 29
        rmuC 2919851 .. 2919863 -  -4.8  -3.13403   CCGTGGTCAGCAACA                GCCT GGTCA AGGC                GGCGCTGATCGCCGT  47 139
CL52_RS13325 2914286 .. 2914330 - -12.3  -2.71011   AGGGCTCCTTAACGA CCGGCCGACGCGCCGGTC-GCCC CTA GAGCAGACCGGC-CGT-GGC-GG CGCACGCGCAAACCG  66 98
CL52_RS13320 NONE
CL52_RS13315 NONE
CL52_RS13310 2911578 .. 2911599 -  -3.7  -3.40403   GGCCTGGCAGGACAA           GCTGTCC TTCGTGCT GGACAAC            AAGCTGATCATCAAG  49 245
CL52_RS13300 NONE
CL52_RS13295 2910427 .. 2910458 - -20.4  -4.24342   CCGCGCAGGAAGAAA      CGAAAAAAGCGACC CTAA GGTCGCTTTTTTCG       TTATCTCGGGCGTTC 100 61
CL52_RS13290 2909459 .. 2909479 - -15.4  -3.27704   ACCGCGGAAACGCAA            GCGCCCCC AATGA GGGGGCGC            CTGGTACGAGAAGAC  84 44
CL52_RS13285 2908619 .. 2908638 -  -9.2  -4.24404   AGCCAAATTTCAAAA            GCCTCGGT CAAT ACCGGGGC             TTTTTTATTGCCTGC  79 375
        uvrB 2904954 .. 2904989 - -20.4  -3.80142   CACAGAACATGCAAA    CCGGAGCCGGCGGCCA CTGA TGCCCGCCGGCTGCGG     TCGCATTCAGACCTG 100 32
CL52_RS13255 2901339 .. 2901370 -  -8.6  -3.95852   AGGCCACGAATGAAA      CACGGCGACCAGTC AGCC GGCTGGTCAGCGCG       AATAAAGCCGCGATG  71 18
        gltX 2899791 .. 2899817 - -15.1  -3.23395   ACTTACCACGACGAA         CGGCAGCCGCC GAAAT GACGGCCGCCG         AGCCGCTTCAGCCGG  83 33
CL52_RS13245 2899569 .. 2899582 -  -8.1  -3.05463   ATCCCTTCTACGCAA               CCCGT CAAC ACGGG                CTGGTGGCAAATCTC  57 49
CL52_RS13240 2899432 .. 2899443 -  -5.8  -3.17392   TAGCCCCGAACTTAA                CGTC TTCC GACG                 AGCGCAACGCCTGGG  51 57
CL52_RS13235 2899293 .. 2899312 -    -5  -2.79796   TCCTAGGCCACTAGA            CGAAGG GGACGTAA CCTTCG             ATACGGTCCGGCAAG  44 61
CL52_RS13230 2899177 .. 2899200 -   -11  -5.38839   GACAGAAAAACAAAA          GGGCCACCTC GCGA GAGATGACCC           CTGAGTGCCCAAGGC 100 52
CL52_RS13225 2898428 .. 2898451 -  -2.2  -3.85518   AAGATGAAGCAAGAA          GTCCAGGAGC AGTG GCGCGAGGAC           GCCGAAGAGCGCCGC  54 83
        dinB 2896911 .. 2896931 -  -2.5  -2.93817   AACGGCTAACAATGA            CCGATATCA ATT TGCCATCAG            TGGCGACGGGACTTT  40 174
CL52_RS13210 NONE
CL52_RS13205 NONE
        gspM NONE
CL52_RS13195 NONE
        mshL 2892723 .. 2892737 -  -3.5  -2.77895   CGCAGGCCGAAGAAC              GCCTCG TACA CG-GGC               TTACCTCACCACCTG  40 26
CL52_RS13185 NONE
CL52_RS13180 NONE
CL52_RS13175 2888661 .. 2888688 -  -2.6  -3.53091   AGCGCCTGGGTCAAA        CCCTGGAAGCTCA CAA CG-GCATCCAGGC        GGCGCGGCACTGGCG  47 47
CL52_RS13170 2887248 .. 2887258 -  -2.4  -3.14132   GCCGTGCTTTAGCAA                 TCGC CGT GCGC                 AATCGCTTGCTGTTA  43 66
CL52_RS13165 2886605 .. 2886625 -  -6.9  -3.96497   CCAAAATCACAATAA            CCATAATCA ACT CGATCATGG            TGAAGCCGCTTTGTT  67 70
CL52_RS20350 NONE
CL52_RS13150 NONE
CL52_RS13145 2883926 .. 2883947 -  -2.2  -3.31188   GACGATAATGACGAA           CATCGCGGC GACTA GCC-CGAAG           CCGCCCTGGCGACCC  45 56
CL52_RS13140 NONE
CL52_RS13135 2880166 .. 2880197 - -23.2  -3.05844   TCTTTTATGCCAAGA      CACAAAGGCCGCTC AGGT GAGCGGCCTTTGTG       TCTTCTAGCGATAGA 100 30
CL52_RS13105 2876161 .. 2876178 -  -5.5  -3.89435   TGGAAACAATCGAAA             CGGGGAA TTAA TTCCCGG              GAGTCAGCCGATGAA  62 459
CL52_RS13095 2874360 .. 2874379 -  -4.2  -3.90112   GTTCGCTGAACTAAA            GCGG-CCGC CGG GCGATCCAC            CGTACAACGCAACCG  58 359
CL52_RS13085 2873431 .. 2873456 -  -9.7  -3.19463   TTCATCACCGAGCAA         CTGCTGGTGGTC GGT GGCCACCAGC-G         CGACCTTGATCGCGA  59 473
CL52_RS13070 2869794 .. 2869805 -  -5.8  -3.53012   CGTCGCTGGCCGAAA                GCTG AACT CAGC                 ACGCGCCGCTGCGCT  55 21
CL52_RS13055 2864268 .. 2864311 -  -5.8  -3.04461   CACCCAGGCCGAACA CGC-GACCCTGGCGCTGCTGC GCG ACATCCACGCCGAGGCCAGCG AGCGTCAGCAGCGCC  47 110
CL52_RS13045 2862924 .. 2862940 -  -2.2  -4.07568   GCGCCTGCTGGAAAA             GGCCGCC AACA AG-GGCC              ATCCGCACGCCGTGG  58 275
CL52_RS13020 NONE
CL52_RS13015 2856923 .. 2856946 -  -3.7  -3.85698   CCCTGTCTGTACAAA          GGCGGCGAT TCTAGC AGCGCCGCG           CGGTCAGCGCGGCAG  58 29
CL52_RS13010 2855929 .. 2855950 -  -6.5   -2.8598   ACACATCCAGAACGA           GGGGC-CGGC CGA ACCGCACCCC           TACACCGCGCCCGCC  48 139
CL52_RS12995 2852601 .. 2852625 - -15.8  -6.11392   AAACAAACAAAAAAA          GAAACGGGCC ATAGA GGCCCGTTTC          TTCATTAGTTACGAC 100 59
CL52_RS12990 NONE
CL52_RS12985 NONE
CL52_RS12980 2850333 .. 2850363 -    -6  -5.00884   ATTTCCCTGAAAAAA       CGCCAGGCTCAATG GGG CCCTGAGGCCGACG       GGCGCTCCGAATGAG  85 3
CL52_RS12975 2850159 .. 2850178 - -11.4  -5.72622   TCGAGAAACAAAAAA            GGCCCGCA TCGC TGCGAGCC             TTTTGAAACACTGGT 100 37
CL52_RS12965 2848265 .. 2848280 -  -5.4  -2.70932   TTCCCTGGGCAACGA              CTGGTCG CTT CGACC-G              CCCAGCGTCCCTCGC  44 117
CL52_RS12960 NONE
CL52_RS12955 2846316 .. 2846361 -    -6  -3.28791   ACGCCGCGCCCACAA GCGCGCCGCCA-AGCAGCCAC CAGCC GCGGCTCATGCAGCGGCGCTC GCCGGCCGATGTCGC  52 10
CL52_RS12950 2845325 .. 2845335 -  -2.4  -2.75064   TGGTCCATGTAACCA                 GTGG ACT CCCC                 GTTCCGGCCGATGGT  39 41
CL52_RS12945 2845069 .. 2845085 - -10.8  -5.44119   TCCAGCCGAAAAAAA              GCCCGC GCGAT GCGGGC              TTTTTTCTGCGCGCC 100 43
CL52_RS12930 2841222 .. 2841234 -  -4.7  -3.14602   CTCACTTGATCAAGA                GGGCC AAA GGCCA                CGAACAACTGTATAA  48 76
        recA NONE
        recX 2839550 .. 2839571 -  -2.9  -3.89336   TCAACGAAACCGAAA           GCTGGGCCGC CGC GCTACCCA-C           GGAAGACTGAACACC  56 134
CL52_RS12905 2834137 .. 2834158 -  -9.5  -2.71731   CGCATCGCTCAAGGA           GCAGCAGCTG GAC CAGCTGCT-C           GATGACGTCGCGCGC  55 351
CL52_RS12895 2833036 .. 2833056 -  -3.2  -4.07568   GGTCGTCGCGCAAAA            GCATGCCA TCGCC TCGCACGC            CGCCATCATTCTTTC  59 205
CL52_RS12885 2830941 .. 2830957 -  -7.9  -3.05384   CTGGGTCTGATCGAA              GGCAGCT GCC AGCAGCC              GGAACTCATCGTGCA  53 507
         fpr 2829563 .. 2829582 -   -15  -4.20806   TATCTGAAAACGAAA            CGAGCGGC CGAA GCCGCTCG             CTGTGTGCACCCGAG 100 47
CL52_RS21635 2827764 .. 2827782 - -13.1  -4.45664   TGAAGGCAATGAAAA             GCCGGGC ACTGG GCCCGGC             TTGGAAGAGGCTGCT 100 46
        dinG 2825021 .. 2825044 -    -6  -3.07935   ATTCCAGCCAGGCAA          GCCGCATTCGC CCG GCGAATG-GCC          AGGTCTGGGGCGAAC  49 40
CL52_RS12845 2823686 .. 2823703 -  -2.7  -3.28712   CGCTTTTCGGCAGAA             TCATGGA CGCT TCCATCA              GGCTTGGTGCGGCAA  45 136
CL52_RS12840 2822993 .. 2823021 - -20.4  -4.28774   TGATTCAAGGCAAAA        CGAAACGGGCCC TGCAC GGGCCCGTTTCG        TTTTGAGCGATCCAC 100 49
        pdxH 2822080 .. 2822093 -  -6.7  -2.87931   TGGATGCTGGATAGA               TTGGC CGAC GCCAA                GGCGCAGAAGGTTCG  50 154
CL52_RS12825 2821185 .. 2821195 -  -3.2  -3.49475   TGCAGTTCCAGATAA                 GTCA ACC CGAC                 ATGCCGGTCATCATG  49 159
CL52_RS12820 NONE
CL52_RS12815 2818004 .. 2818022 -  -5.9  -3.67622   GATGGGGAAAATCAA             CGCGTGA GTCAT TCGCGCG             ACTCCCGCCCGTCGA  57 15
CL52_RS12810 NONE
CL52_RS12805 NONE
CL52_RS12800 2815766 .. 2815791 -  -3.3  -3.55444   GCGGCATGTTCTAAA         CCTCA-GTCGAT GAT ATCGCCGTGAAG         CAAGTGCTTGGCCAC  51 2
CL52_RS12795 2815014 .. 2815043 -  -2.8  -4.20783   AGCGCATCGAAGAAA       TCCGCCAGGGCCT GATCG ACGCCCTG-CGCA       ACCCCGACGAGTACC  63 410
        rpsB 2810827 .. 2810847 - -16.9  -3.92075   ATTCGGAGTGACAAA            GAAGGGGGC CTA GCCCCCTTC            TTGTCCATCGGGTCT 100 60
         tsf 2809842 .. 2809869 - -14.8  -3.88291   CACCAGTTTGACAAA        GAGGCCGCGCGC GTTA GCGGGCAGCCTC         TTCGTACCGGACGGC  89 49
        pyrH NONE
         frr 2808353 .. 2808375 - -13.4  -3.07935   AGCTCATCGACCGAA           GCGCACCGCC AAT GGCAATGCGC           TTCGCAGAACAGACT  75 47
        uppS NONE
CL52_RS12755 NONE
        ispC 2805509 .. 2805537 -  -2.2   -3.2964   AAAGCGCGCTCATAA       GGTC-CTCCGGGC TAAC GCCCGTGGCGGCC        CAGCCAGTCACCCGC  45 8
        rseP NONE
        bamA 2801694 .. 2801714 -  -2.5  -2.74523   GCACGGTGAATACCA            CTCCTGCAA AGG TTACCGAAG            CAAGATGCTCGGCTA  39 44
CL52_RS12735 NONE
        lpxD 2800054 .. 2800070 -  -9.4  -3.50335   CTGTAGAAATATGAA              GGGGCA ACCAA TGCCCC              GCCTCGTCGACGCGC  65 74
        fabZ NONE
        lpxA NONE
        lpxB NONE
        rnhB 2796943 .. 2796956 -  -2.3  -3.53224   GATTTGGGTGGCAAA               CTCTG GCAT CAGCG                CTCTCCATCGGCAGT  47 108
CL52_RS12705 2795479 .. 2795520 -  -4.4   -4.1899   CGATTGTACCGAAAA GCG-GCCG-AGGCAGGTC CGCCGTTC GCCCTGCCTGCGGCACGA TACTCAGGGCTTGAT  63 29
        dnaE 2791827 .. 2791843 - -13.7  -3.75024   GTTCAGCACCAACAA              CCCGGTC GGC GACCGGG              CCGATCGAGCGCCGC  84 82
CL52_RS12695 2790715 .. 2790736 - -15.9  -4.19735   CCGCCGAAAACGAAA           CAGGGTGCC GGAA GGCACCCTG            TCATACCGCAGCTGG 100 56
        tilS 2789270 .. 2789294 -  -8.5  -2.75535   GCAATAGCGTAACCA          CCACGGCTTTC GAG GAAGGCCGCAG          AAGCTGTATTAAGAC  54 74
CL52_RS12685 NONE
        kdsA NONE
         eno 2785351 .. 2785368 - -10.5  -5.65927   GATTGAAACAAAAAA             GGGCGAC TTAC GCCGCCC              TTTTCCCGATCTTCC 100 43
        ftsB NONE
        ispD 2784227 .. 2784260 - -25.3  -2.60079   CTAGGTCAGAACCCA     GCCCCGCAGACCGGC TCAG GCCGGGCTGCGGGGC      ACGCCTGTCACCTCA 100 38
CL52_RS12645 2780379 .. 2780415 - -11.6  -2.57881   GAACCTCCGTAGAAT    GCGCCTTGCGCACC GGTATCCAG GGTGCGCAAGAAGC    CGGTGAGCGCCCGTG  65 58
        fghA 2779087 .. 2779112 - -19.7  -3.64703   TCCTTGCGACGGAAA         GGCCCGACCGG GAAA CCGGCCGGGCC          TTTTTTGTGCGTTCG 100 429
        ispF 2777011 .. 2777038 -  -4.8  -2.71144   CATGTGGTCCAAGCA        GCTGCTCTTCGGT CAT ACCGC-GACCAGC        AGAGCGACCGCATGC  44 10
        truD NONE
        surE 2775243 .. 2775255 -  -3.4  -3.28712   CGCGGTGGTTCACAA                GATG TCCTC CATC                CAGCGATCCAGCCCC  46 7
CL52_RS12610 NONE
CL52_RS12605 NONE
CL52_RS20735 2772698 .. 2772723 -  -4.6  -3.76224   CGTCCATGCACGAAA         CCCGAGCC CATTAGTGGC GGCACGGG          TGGCTTGGAGTCAAC  58 36
        rpoS 2771601 .. 2771630 - -22.3  -4.62783   TAGTGAGGCCAAAAA       CGAAACGGGCCTG AAAT CAGGCCCGTTTCG        GCGACCGGGACGCCT 100 40
CL52_RS21235 2770778 .. 2770803 -  -7.5  -3.05963   ACTGCCAGCGGAAGA         CGTCGAACCGC TCGG GCGGTTCCAGG          CGGCCGCCGCCAACG  53 221
CL52_RS12585 2767624 .. 2767638 -  -4.2  -3.30124   GTTGATCTGGCACAA               GCCG CGATCAT CGGC               GCCTGCAATGGAGGA  48 487
CL52_RS12575 2767064 .. 2767086 - -11.3  -3.50853   GCTGCTCAAGGACAA          GGGCTGAGGC CCTT GCCTC-GCCC           CTGTTCTCAGTTGCC  71 43
         dgt 2763954 .. 2763983 -  -7.1  -4.11484   GCCAATTCTGGAAAA       CCGGATC-GCGCCA AGT TGGAGCTGATCAGG       TATTTCCTGCACCGA  69 166
CL52_RS12550 2762522 .. 2762567 -  -9.6  -3.28712   GGGCGCTGCTCACAA CGGGCCGACTGCGGGCGAACG ACTGG CGTTCGCCCGC-GCCGCGTCA ATCCTGATTAAGCGC  63 23
CL52_RS12545 2761487 .. 2761514 -    -9  -3.05384   GTTCGGCCGACGCAA        GCCGTACCGACG AACG CGCCGACTCGGC         TCAGGCGTCCAGCGA  60 26
CL52_RS12540 2761076 .. 2761102 -  -6.4   -4.6971   CAAACTGTAAGAAAA         TGCGGGCCGC GCGATCG GCGGCCCGGG         AAGGTCGTTTGCAGA  81 46
CL52_RS12535 2760403 .. 2760422 - -16.4  -3.90286   CACTAGAAATGCAAA            GGGCCGCC TCAC GGCGGCCC             TCATTACCGGCTACT  95 50
CL52_RS12525 2758883 .. 2758898 -  -4.6  -3.21099   CGGTTCCACGATCAA              CCGAGC GACA GCCCGA               TCGCGACCAGCAATG  48 6
CL52_RS12520 2758507 .. 2758524 - -14.1  -4.19953   GACTGAACGCGAAAA             GGCCCGG TTTC CCGGGCC              TTTCTATGTAGCGCT  93 40
CL52_RS12510 NONE
CL52_RS12505 2757346 .. 2757373 -  -4.9  -3.61715   GAGCTGGGTGAAGAA       CTT-GGCCACGGC CTGT ACCG-GGCCGAAG        TGGATTACCTGCTCG  52 194
CL52_RS12465 2747293 .. 2747304 -  -5.8  -3.68351   CGGCCAGCACCGAAA                CGCT GACC AGCG                 GTTACCCGGATGCCA  57 176
CL52_RS12455 2744776 .. 2744833 -  -9.5  -3.15861   GACCATCCGCAGCAA GCCGGCGCACTGACCCGCGGC-CCCGCC GCA GGCCGATGCCAGAGGACCGAGCGCCTGC AGGCTCGGTCCTGGC  61 60
CL52_RS12400 2732065 .. 2732084 -  -8.5  -2.71791   ACTGTTGCCGGAAAT            CCGGCGG TCGCGG CCGCCGA             TGCAGCATCCAAGCC  54 163
CL52_RS12395 NONE
CL52_RS12390 2730814 .. 2730829 - -10.4  -4.89838   GTAAGAAACAGAAAA              GGCTCC CTCG GGAGCC               TTTCTCGTCTCAGCG 100 44
CL52_RS12380 NONE
CL52_RS12375 2727092 .. 2727106 -  -8.5  -5.14563   GCGCCCATGAAAAAA               CCCGC ACAAG GCGGG               TTCTTTCACGAGCGA  93 47
CL52_RS12370 NONE
CL52_RS12365 NONE
CL52_RS12360 NONE
CL52_RS12355 2723469 .. 2723487 -  -5.9  -2.57132   CCCGCCCCCGAGAAC             CGCTCGC CTCAT GCCAGCG             CTCGCTCATCCTGCC  46 15
CL52_RS12350 2722844 .. 2722864 - -11.1  -3.12351   GGCGTCGAGACTGAA            GAGCAGCTG CAG CTGCTGCTC            GACGACGGTTGCACC  64 150
        pyrF 2718893 .. 2718906 -  -6.7  -3.31144   CGTCTACTTCGACAA               TGTCG GTGG CGACA                TTCTCGATGCCGTGC  54 391
CL52_RS12330 2716992 .. 2717007 - -10.4  -3.28791   AGGGTCGTCGTACAA              GGGCCA TCCT TGGCCC               TTTACGACTCTCGCC  66 269
        fliE NONE
        fliF NONE
        fliG NONE
        fliH NONE
        fliI 2710100 .. 2710118 -    -8  -3.14132   CCCTCGCTCCATCAA             CCGGCCGG CCG CGGGCCGA             ATACCGCCGACAGCT  56 3
        fliJ 2709445 .. 2709468 -  -5.9  -4.13767   TCTGTCATTCGAAAA          CAGCG-GGCG ACCTG CGCCGCGCAG          CGGCAGGCTCACTGC  67 140
CL52_RS12290 NONE
CL52_RS12285 NONE
CL52_RS12280 2706926 .. 2706936 -  -2.4  -3.56594   GGAAATCCGGGGAAA                 CGGC CAT GGCG                 GGTTACGCTCGCAGA  49 83
CL52_RS12275 2705622 .. 2705666 -  -8.5  -2.94099   TGGCGCGACGACACA GCG-GCGACGCAAGCGAGCGG GCACG CCACGCGCT-GCGCCGGGCGC GGGAGATCAGGCGTA  55 32
        fliL NONE
        fliM NONE
        fliN NONE
        fliO NONE
        fliP NONE
        fliQ NONE
        fliR NONE
        flhB 2699586 .. 2699606 - -13.9  -2.75074   TCGACGGCAAGACCA            CGCCGGCCG GCG CGGCAGGCG            GCCACTGGGATCCGA  69 320
        flhA NONE
        flhF NONE
        fleN 2694821 .. 2694831 -  -2.4  -3.09273   TTGCTGTAATACATA                 GCGG ATC CGGC                 AGTTTTCATTCGTGG  41 31
        fliA 2694056 .. 2694070 -  -5.6  -4.19238   TCCGTAATTCCAAAA               TCTCGG CAA CCGAGC               ACGTCTCGCAGCAAT  67 49
CL52_RS12205 NONE
CL52_RS12200 NONE
CL52_RS12195 2690544 .. 2690554 -  -3.2  -3.87815   CTTGACTGCCATAAA                 CACT CCT AGCG                 GCGGTGGTCCGCAGA  56 56
CL52_RS12190 2689414 .. 2689445 -  -3.9   -2.8001   ATAAGGCTGAGCACA      TCCATCTAGA-GAA CCGCC TTCATCTAGATGCA      GGCCTCGGACAGATG  42 17
CL52_RS12185 NONE
        motD 2687838 .. 2687851 -  -9.5  -2.53409   GATGAATTGACGAAC               GCGCC ATCG GGCGC                CTACCTGCCTGCCGC  56 26
CL52_RS12175 NONE
CL52_RS12170 2686026 .. 2686037 -  -7.2  -3.29144   TCACCTTCTCCAGAA                CCGC AACG GCGG                 TCGTCTTATCGGGGG  58 69
CL52_RS12165 NONE
CL52_RS12160 2685001 .. 2685013 -  -3.3   -2.5751   ACAGCATCAGAATAC                GCAGC ATC GCTCC                TCCTCCCTGTTGATC  39 122
CL52_RS12155 2684434 .. 2684454 -  -7.5  -3.05384   CTGGCGCGCATGGAA            CTGGGGGAC GCG ATCCCCGAG            TCGCTTTATCGCACC  53 141
        ccmA NONE
        ccmB NONE
CL52_RS12130 NONE
        ccmD NONE
        ccmE NONE
CL52_RS12115 NONE
CL52_RS12110 NONE
CL52_RS12105 NONE
        ccmI NONE
CL52_RS21465 NONE
CL52_RS12090 2674733 .. 2674767 -  -2.9  -4.56358   GAGACTGATAGAAAA    GTTCCGTTACGTTTGCC TAA GGCAGACGGAA-GGA-C    ATGCGGCATTGCGTC  69 58
CL52_RS12085 2672961 .. 2672981 -  -2.4  -2.62184   GCCCGCGGGAGATCA            CTCGGCGA TGTCG TCGTCGCG            GCGATTCATCCCGTA  38 2
CL52_RS12080 2671653 .. 2671673 -  -3.9  -3.75024   TTCGACCAGCAACAA            CCGATCATC AGC GGTCATCGG            CAAGCTCCTGCACCG  56 12
CL52_RS12075 NONE
CL52_RS12070 2669479 .. 2669519 - -10.4  -3.26947   CAACCTGCAGAGCAA  CGTCGACCGACTGCTGCA GGACA TGCAGCGTTCGATCGATG  AGGCCGACGGTTTCG  63 90
        msrB NONE
CL52_RS12040 2665126 .. 2665139 -  -2.4  -3.24232   TGCGGGCTAAAGATA               CTGT TCGATC ACAG                CGCCCAGCGTCTCCG  43 3
CL52_RS12035 2664160 .. 2664200 - -16.2  -3.63968   CGCCAAAGCCTGAAA CCGCATCGGTATCGCCCAC CTCA GCGGGCGGTACCGA-GCAG  CTGCCTACCGACCCA  91 5
CL52_RS12020 2662380 .. 2662403 -  -5.2  -2.57564   CTATTCCCGCAGAAC          TTGGCGTCCC CTAG GGGACTCGAA           CCCCTGTTACCGCCG  43 3
CL52_RS12015 2662247 .. 2662262 - -10.4  -5.42514   GCAGAAACGAAAAAA              GCGACC GTCT GGTCGC               TTTTTTCTTGCCCTC 100 62
CL52_RS12005 NONE
CL52_RS12000 NONE
CL52_RS11995 NONE
CL52_RS11990 2659995 .. 2660039 -  -4.7  -3.53761   GAAGTCGTCCTCAAA GGCGTTCAGCACGACAAGGGG CAG CTGCGCGTCGGGCTGTATGCC GAACCGAAGACCTTC  52 358
CL52_RS11950 2652356 .. 2652388 - -14.2  -3.28712   GCCGCTGGCCGACAA     CGCCAGCGCTGCCGGC CGA GCCGGCAAC-C-GGCG     AGTGGAACTGGTGAT  75 72
         ffs 2649404 .. 2649415 -    -3  -3.10464   CGACGAACGCGAAGA                GAAA GGGA TTTC                 GAGAAGGCGTTATGG  43 47
        earP NONE
         efp 2647512 .. 2647530 - -13.1  -5.10461   GGCAGGCAAGAAAAA             GCCCGGC ACATG GCCGGGC             TTTTTCGATCGTTCA 100 54
CL52_RS11910 2643635 .. 2643647 -  -4.7  -3.05596   CACGCGCTCAGCGAA                GCGCG CCC CGGGC                TGGTGCAGCTCAGCT  47 35
CL52_RS11905 2641080 .. 2641096 -  -9.4  -2.91199   GAATCGTCAAGGATA              GTCCGC GCGGG GCGGAC              AGCAGCCGAAGCAGC  58 221
CL52_RS11900 2639233 .. 2639250 - -12.7  -4.98531   CGCGGAAACGAAAAA             GGCGAGC CGAA GCTCGCC              TTTTCCCGATGCGCG 100 48
         acs 2635151 .. 2635195 - -11.5  -3.55071   GCACATCGGCCTAAA GAGCACGCGCATCCGCTCGC TGAGCG GCGAGCAGAT-CGTCTGCTC CAACGCCGACCTGCT  72 469
CL52_RS11875 2632565 .. 2632578 -  -4.5  -4.07568   GCTCGTTCTCCAAAA               GCCTGG CGC CC-GGC               TATCGGGTCGGCTGG  61 496
CL52_RS11860 NONE
CL52_RS11855 NONE
CL52_RS11850 2628505 .. 2628530 - -19.1  -5.08824   CCGCCAGTTAAAAAA         GCCCCTGAGTC TTGC GACTCAGGGGC          TTTTTCGTTGCGCCT 100 49
CL52_RS11840 2627342 .. 2627362 - -19.7  -4.96388   AATTAGGAAAGAAAA            CGCCCCGCC AGC GGCGGGGCG            TCACAAGGCGCAGTG 100 90
CL52_RS11835 2626051 .. 2626076 -  -8.1  -4.07568   CGCTCTTCTGGAAAA         TTGAGGGGCGG CAAG CCGCCCCCCGG          GACGAGTCAGGCCTG  73 32
CL52_RS11830 2625633 .. 2625689 - -16.6  -2.78384   TGCCGCTGGAGCAGA CGCCGGCCGAACGCGAGCGCTTGCGCA GCAG TGCGCAAGCAGCCACGT-CGACCGTCA CGGTGACGGGCAATC  77 83
        fadB NONE
        fadA 2619407 .. 2619437 - -13.3  -4.83615   GAGCCTCCACAAAAA       GGAAAACCGGGGC TTGCG GCCCCGGCTTTCA       TTGACACCAATCTGC 100 101
CL52_RS11805 2619091 .. 2619112 -  -2.9  -4.07568   CGCTCTGCCTGAAAA           GCACCGCTA TATA TAGTGGTGA            CGGATGACAGGTCAA  58 75
        topA 2616271 .. 2616325 -   -10   -3.1733   GCGGCGACAAAACCA GCACATGCC-CGACGGGCGCCCCGCTC ATTC GAACCGGGCGCC-GTCGCAGCG-GCGC ATCAGCGCTTGTCTT  64 27
CL52_RS11795 2615665 .. 2615686 -  -2.9  -3.70417   ACGACACGACGGAAA           CGACGCGAA TCAA TTCAAGCCG            GACGTCACCACTCAG  54 30
CL52_RS11790 2615097 .. 2615113 - -12.3   -4.2558   CACCTGGCAGGAAAA              GCTCAGC AAC GCTGAGC              GTAACAAGCTTCGTG  91 143
CL52_RS11775 2613170 .. 2613197 - -13.6  -2.73483   AGCTTAGCCCAAGCA        GCCACAGGCTTGA ACC TCAAGCCT-TGGC        AGGAACCGCCACCGC  72 14
CL52_RS11770 NONE
        nagZ NONE
CL52_RS11760 2610756 .. 2610781 -  -3.2  -3.63895   TCCAAGTACTCCAAA         GGACGGCTCA GTGTAG CAAGCGGTCC          GGCAGCCGCAATGGG  51 102
CL52_RS11755 NONE
CL52_RS20720 NONE
CL52_RS11750 2609521 .. 2609539 -  -4.4  -3.39327   CGTCGACATGGATAA             CTCCTCGC GGG GCGAGCCG             ACAGACAGGTGGTAG  48 62
CL52_RS11745 2606488 .. 2606501 -  -2.3  -4.05788   GCCCTGGAAAGCAAA               CCACG CCTG CGTGT                ACGCCCGCCCCGACT  58 504
CL52_RS11730 2602460 .. 2602480 - -10.4  -3.35813   CGCGACGTGAATGAA            CGTCCGGG GATCG CCCGAACG            TGTGTGGTCAGGGCG  66 33
        betB 2600939 .. 2600951 -  -4.8  -2.52623   CCTCCCTCAGAACAC                CGAG GCGAA CTCG                CCCAGCTCCACCTGT  43 4
        betA 2599142 .. 2599161 - -16.4   -3.8377   AACCGCTACATGAAA            CGCCCCGC TTCT GCGGGGCG             TTTTCATTTCGGCGT  95 106
CL52_RS11705 2594996 .. 2595017 -  -5.1  -3.68351   CGTGGAGCAGGCAAA           GATCGACACC GTC GGCGCCG-TC           ACCATTTCGCTTGGC  57 176
CL52_RS11690 2592168 .. 2592178 -  -2.4  -2.77899   CTTGTTTACTAAGTA                 GGGG TGC CGCC                 TAGGGCGGTGATGAT  39 8
CL52_RS11685 NONE
CL52_RS11680 NONE
        cpaB NONE
CL52_RS11670 NONE
CL52_RS11665 NONE
CL52_RS11660 NONE
CL52_RS11655 NONE
CL52_RS11650 NONE
CL52_RS11645 NONE
CL52_RS11640 NONE
CL52_RS11635 NONE
CL52_RS11630 NONE
CL52_RS11625 2579515 .. 2579530 -  -5.4  -3.01712   CGGTGCTGTCGAACA              TCGGCCG GCA CGG-CGA              CTTTTCCTATGGTCT  47 251
CL52_RS11530 NONE
CL52_RS11525 2559735 .. 2559770 -    -3  -3.16683   ACGCGAGGCGATCAA    GCG-CATGTCGACCGCC CAC GGCGGGCGCGGCGGCGC    GATCGTCAACCTGTC  44 372
CL52_RS11515 2558748 .. 2558770 - -16.4  -3.34013   GACCGCCGGAACGAA           TAAGGGTGCC CGA GGCACCCTTA           TTCAGCTTCGCCTGG  88 46
        leuC NONE
        leuD 2552562 .. 2552572 -  -8.2  -2.57931   CGTAGGGTGGATAAC                 GGCC CTC GGCC                 CTAACCACCGGAATC  53 89
        leuB 2551418 .. 2551440 - -12.7  -2.60511   CACCTATAAATAGAG           TGGCCCGCC ACGAG GACGGGCCA           GAAAGATTACAACTT  67 32
         asd 2550215 .. 2550244 - -20.7  -4.21744   ACCGAACAAACGAAA       GGCCCGGGACGAC GAAC GCCGCCCCGGGCC        TTGGCTGATCAAGCG 100 62
CL52_RS11480 2548980 .. 2549002 -  -4.8  -3.56099   GAGAAGGGTCTCAAA           GCCACTGC CCGCGCC GCATTGGC           GCCCCCAACCAGTGA  55 98
CL52_RS11475 NONE
        truA 2545362 .. 2545381 -  -3.4  -4.65916   CCGATGGTAACAAAA            GCGGCCCC TACT GCAACCGC             ACTAGCCGCTCAGCT  69 27
CL52_RS11465 NONE
        accD NONE
        folC NONE
CL52_RS11450 2541750 .. 2541762 -  -4.7  -2.70932   GCCTCGTTTGAATCA                GCCGG CCT CAGGC                TTGAAGCGCACCACG  44 10
CL52_RS11445 2541128 .. 2541152 - -11.5  -2.57132   CCTCTCCGTGATAAC          TCACTCAACCC GGC GGATTGAGCGA          CCCGGCCAGCCACTG  62 5
        purF NONE
CL52_RS11435 2538254 .. 2538292 - -26.8  -2.81133   GATTGACGGACCAGA   CGCACCTGCAACCTGCCG ATT CGGCGGGCTGCAGGTGCG   TAATGGCAACAGCGG 100 44
CL52_RS11420 2535037 .. 2535047 -  -2.4  -2.76189   TAACCGACTGAACTA                 CCGC TGC GCGT                 CGGCCGGACTTTCGT  39 59
CL52_RS11415 2534912 .. 2534926 - -11.4  -5.60993   GCGGGCACAAAAAAA               GCTGCC CTT GGCAGC               TTCTCTCGTTCCACC 100 66
CL52_RS21625 2529829 .. 2529844 -  -3.2  -2.54192   GAGATGACCACCAAT              TGCTGC ACTC GCATCA               GCTCATCCTGCTGCG  39 172
CL52_RS11390 2529099 .. 2529113 -  -7.1  -3.18383   AGTTGCAGCCAGCAA               GCCGA GGTGT TCGGC               GTCCGCTGGTTATGC  53 221
CL52_RS11385 2527789 .. 2527815 -  -6.5  -3.79113   ATGTGCTCATAAGAA        GC-CAATGCGGG TCCA CCCGCTCTGAGC         CGACAGTTCCAGCTC  62 172
CL52_RS11375 2523877 .. 2523895 - -17.4  -3.64236   ACGGAAACGCCGAAA             GCCGGCCG GGC CGGCCGGC             GTGGGAAAGCCGTCT 100 40
        zigA NONE
CL52_RS11365 2521708 .. 2521723 -    -9  -3.57792   TCAGCGACCGGCAAA              GGGCAT ACGC ATGCCC               GCCATGGCATGCGTA  68 140
CL52_RS11360 2519583 .. 2519630 -  -6.4  -3.39529   CCAATCCAACATGAA CGACCTCGACACACGG-TTTGTC GCTGT GACAGCGCCG-GTGTCG-GGTCG TGCCGGGAATCGGAC  55 58
CL52_RS11355 2518914 .. 2518935 -  -7.9  -2.71731   CCGACGCCTGAACCA           CCCGCGCCCG CAC CGGGC-CGGC           TAATCCAGCGATGCC  52 25
CL52_RS11345 NONE
        cydB NONE
CL52_RS20715 NONE
CL52_RS11325 2511157 .. 2511184 -  -7.6  -3.53091   ATCGGCTTGGCTAAA        GCG-CGCCAGCCA GCG CGGCAGACGCCGC        CGCTCTGCAGCCGGA  60 157
CL52_RS11320 NONE
CL52_RS11315 NONE
CL52_RS11300 NONE
CL52_RS11295 NONE
CL52_RS11290 2503410 .. 2503438 -  -3.9  -2.90798   CGATAAAGGATGACA       TGGCCGACTC CCGGAGAAAC GAG-CGGCCA        TTCTAGCGGAATTGC  44 65
CL52_RS11285 NONE
CL52_RS11280 2502278 .. 2502288 -  -8.2  -4.07568   GGCGGTGGTGGAAAA                 GCGC TTC GCGC                 GTTTTCCACCCTACG  73 36
        pepN 2499149 .. 2499168 -  -5.6  -3.07816   TTCTTATTTAGGTAA            GGCCCGGT TTTT ACCAGGCA             GCATCATCTAGCCAG  49 202
CL52_RS11270 NONE
CL52_RS11265 2495585 .. 2495612 - -21.4  -4.13995   GCCTTACAAAGCAAA        GAGGCCCGCATC TTCC GATGCGGGCCTC         TGCGTGCAGCGGCTG 100 44
CL52_RS11195 NONE
CL52_RS11190 2478361 .. 2478386 -  -7.5  -2.62463   GCGATGATCGAGAAT         GCCTCGCTGCCG CAG CAGC-GCGAGGT         GCGTTCGACCCTGGT  50 170
CL52_RS11120 2456594 .. 2456645 - -18.8  -2.57463   AACCGCTTCCAGAAG TCTGACCGG-GCTGACCGACCGGGC GAC GCCCGATCGGTCAGCGCCTCTCACA GTCGCTCGCGCATTG  87 21
CL52_RS11110 2455260 .. 2455280 -  -4.7  -3.06796   CGGCATCGGATTTAA           GCCGATCG CCCCAT CG-TCGGC            AGCGCTCAATCCAGC  47 31
CL52_RS11105 2453745 .. 2453784 -   -12  -2.52464   CGGCTTCGCAACGGA  GTCGACGAGGCTCGCCAC GCCG GCAGCGGGCCTCACCGGC   AGCCTGTCTGCCCGG  65 404
       rlmKL 2451324 .. 2451337 -  -4.5  -4.02817   CCTCTACAACAACAA               CGGCA ACCG TACCG                CTCAGCGCTGAGCCG  61 47
CL52_RS11085 2449149 .. 2449175 -    -5  -2.87132   CTGCTTGCCGAGACA         CTGGCGCAGGAT TGG AACCTGCCACAG         GTGCGCCTGATCAAC  44 171
CL52_RS11050 2443525 .. 2443539 -  -8.5  -5.12068   GAGAGGCAATAAAAA               CCGGC CTTGC GCCGG               TTTTCTATTGCCTAG  93 61
CL52_RS11030 2441185 .. 2441213 - -14.6  -4.14627   TGCGGATAGAAATAA       CGGGCCGGC-CTC GACG GAGCACCGGCCCG        CCAGCTCCGACTACT 100 36
CL52_RS11025 NONE
CL52_RS11020 2439084 .. 2439109 -    -4  -3.12327   CCGGCAGATGTAATA         TCCATCATCC GACCGA AGATGCTGGA          GACGTTTCCGCAGTT  45 350
CL52_RS11010 2437868 .. 2437885 - -12.7  -5.90981   GCAGACCAAAAAAAA             GGGTCGC TTTC GCGACCC              TTTTCGATTTGGTAG 100 35
        thrS NONE
        infC 2435176 .. 2435201 -  -2.5  -3.26097   AATAACAACAGTCAA         CCATCAGGC-CT GCC AGTGCCCGGTAG         GTTACTTACGCTTCT  45 27
        rpmI 2434958 .. 2434970 -  -9.1  -2.67166   ACCGAATCAACGAAC                GCGCA GCA TGCGC                TCCACTTTTGCAACG  56 4
        rplT 2434489 .. 2434516 - -18.6  -3.88498   TCCTTAGATACGAAA        TAGGGGAAGAGC ACAG GCTCTTCCCCTA         TCGAGTGACATCCGC 100 74
        pheS NONE
        pheT NONE
        ihfA NONE
CL52_RS10970 2430242 .. 2430281 - -15.2  -4.00042   GTCCCGACCAAACAA  GATAACGGGATCAGTAGCC TTA AGCT-CTGATCCCGTTTTC  ATTTCAGGCTTCATA  95 74
CL52_RS10890 2414615 .. 2414647 -  -7.5  -3.04144   CGCCGAGGTGGAACA      GCCGGTCGAAGCCCC CGT GGCGCTGCCACCGCC      GACGGTTGGCGAAGA  53 469
CL52_RS10845 NONE
CL52_RS10840 NONE
CL52_RS10835 NONE
CL52_RS10830 NONE
CL52_RS10825 NONE
CL52_RS10820 2397278 .. 2397336 - -13.3  -2.87026   GATAGCTACACTACA TTTCCCCGTGTGGATCGATTGCATGAAGC TAT GCA-CAT-CGTTCGATCCACACGGGGACA TCCACATGAAACGCC  70 208
CL52_RS10805 NONE
CL52_RS10800 2393914 .. 2393930 - -15.1   -5.4833   GCAGCCAATAAAAAA              CCCCGCC GCA GGCGGGG              TTTCTTGTTAACCGA 100 68
CL52_RS10795 2393272 .. 2393294 -  -2.6  -3.56099   GATAAGGGGGCGAAA           CGACAGCATG CTT CATGGCGTCC           TACCTTGTAATTGGT  49 202
CL52_RS10790 NONE
CL52_RS10785 NONE
CL52_RS10780 NONE
CL52_RS10775 2388900 .. 2388944 -  -8.4  -3.14463   AAGCTCGCGCAGTAA GCCTGCGCCCGTCCGGCGCGC CGAG GTGCGCCGGACAA-CGCCCAC CTACCGACCGCCCAA  58 67
CL52_RS10765 2387688 .. 2387712 -  -2.7  -3.80014   AGAGCCACGATGAAA          TCTCCCTATCG GCG CGATAGGCCGC          CCCGTCAGCCCCCTG  52 52
        katG 2385256 .. 2385281 - -19.7  -3.92522   GGCTAATCGCACAAA         GCAGCGGCGCC CTGA GGCGCCGCCGC          CCTTCTTACGCCGAG 100 31
CL52_RS10750 2381738 .. 2381760 -    -2  -4.04206   CGATGCCGAGAGAAA          GCGCGATCG GTTGCT CGATCA-GC           TGGCGCGAGAAGCCG  58 101
CL52_RS10695 NONE
CL52_RS10690 2365441 .. 2365455 -  -5.6  -3.15544   TTCGAGGGCTACGAA               GCCCTC GAC GAGGCC               GCGCGCAGTGCGCGG  49 265
         pap NONE
CL52_RS10675 2361908 .. 2361925 - -12.7  -4.72272   TGCGCTCAGGAAAAA             GGTGGGC TGAA GCCCACC              CCACGAGGCTGCGAT 100 150
CL52_RS10665 NONE
CL52_RS10660 2359412 .. 2359431 - -16.4  -3.81488   GGTGGTGAAACAGAA            GCGCCGGC AACA GCCGGCGC             GGGAGGCGGATTCTA  93 79
CL52_RS10655 NONE
CL52_RS10650 NONE
CL52_RS10645 NONE
CL52_RS10640 2353772 .. 2353788 -  -7.9  -3.14132   GTGCTCCCTGAGCAA              TGGCACC GGC GGTGCCC              TTTGCACTAGATCGA  56 83
CL52_RS10635 2351905 .. 2351916 -  -2.2  -4.07687   ACCGTCGCCGGAAAA                CTCA TGGC CGAG                 CAGCGCGTGCGTCTG  58 510
        arfB 2350626 .. 2350652 -  -6.5  -3.05596   GACCTGGTGACCGAA         CCGCACGGG CACTTCACC CCCGTGCTG         CGCACCAGCCCTACC  49 182
CL52_RS10605 2345860 .. 2345889 -  -2.7  -3.49419   GTTCCTTAGAAAAAC       GGGCGATGGT-GTG GAG CTCGACCTTCCCCC       TCACCCCAGCTCTCT  47 210
CL52_RS10600 2344410 .. 2344441 - -14.6  -2.87211   ATGTGCTTCGAGACA      TCCACCCTACGA ACCTGCCG TCGTAGGGTGGA       AAACGGCGAAGCCTT  77 261
CL52_RS10595 NONE
CL52_RS10590 2342557 .. 2342567 -  -6.8  -4.08945   ACCATCGGTGGAAAA                 GACC TGC GGTC                 GTTTTCCACCCTACG  67 42
CL52_RS10585 NONE
CL52_RS10580 NONE
CL52_RS10575 2339282 .. 2339307 - -11.8  -5.64274   TCAGGCATAAAAAAA         CGGGCCGGTC ACATCG GACAGGCCCG          TTCGTTCTCGCCGCT 100 57
CL52_RS10570 2337963 .. 2338003 -  -7.3  -3.28712   GCGCTTCGCCCACAA  CGACGGCCGCGCCCAGCAC GCC GAGCTGATCGATGCCGCCA  TCGGCGAATGGACCA  54 352
        ihfB 2336289 .. 2336311 -  -9.1  -3.37344   TTTTTAGTGAACTAA           TTCCGCGAC GTACT GTCGCGGGA           GAGCATTTCGAACAA  63 41
CL52_RS10555 2334096 .. 2334123 -  -4.8  -3.07994   TTCAATCCTATTCAA        CAGC-CTGCCGCA TTA TCCGGCAGAGATG        ATCCGTTCAATGGCA  47 10
CL52_RS10550 NONE
CL52_RS10545 NONE
CL52_RS10540 NONE
CL52_RS10535 NONE
CL52_RS10530 NONE
         gmd NONE
CL52_RS10520 NONE
CL52_RS10515 NONE
CL52_RS10510 NONE
CL52_RS10505 NONE
CL52_RS10500 NONE
CL52_RS10495 2317643 .. 2317659 -  -2.9  -4.58395   GCCACGCTGGAAAAA              TGCCCTA CCA CAGGCCA              CGGTAGATCCGGTCT  69 128
CL52_RS10480 NONE
CL52_RS10475 2312466 .. 2312492 -  -4.2  -3.92592   ACCTGCAAGACGAAA         CGCTGCGCAGTT TAT AGCCTCGCCGCG         ACTTTTTCAGGAGCC  58 105
        queF 2311157 .. 2311167 -  -2.4  -3.77302   GCAGTATAAAACCAA                 TCGG CCG CCGC                 GCGCGTATCGCGTGG  52 471
CL52_RS10460 2310119 .. 2310140 -  -7.9  -3.57792   GCATGCACGTCGAAA           CCGACGTGC AGTT GCTCATCGG            CGAGCGCCAGGTGGC  60 267
CL52_RS10450 NONE
CL52_RS10445 2308158 .. 2308168 -  -2.4  -4.30844   ACGGGATCAGGAAAA                 GCTC GAA GCGC                 TGCTGGCAGCGAAGT  62 46
CL52_RS20700 2304427 .. 2304462 -  -3.5  -5.04325   TCCAAAGCAGAAAAA   TAGCACTTATCGACG TCTAATTT CGTCGATA-G-GCTA    ATTTGAGAGGAAACG  78 424
CL52_RS10425 2303201 .. 2303220 -    -2  -4.23723   CAACATCACGGAAAA            TTGATGCG TGTC CGCGACAA             CCACACGCTGGGTGA  59 402
CL52_RS20695 2302420 .. 2302430 -    -4  -2.70525   TGCTTTCAAACCAAC                 GATT CGC AATC                 CCTACCGCTACGGCA  42 261
CL52_RS10420 2300417 .. 2300427 -  -3.2  -4.90013   GAATTTAATGAAAAA                 CACA TGG TGCG                 AGGCGATGATAATTT  77 483
CL52_RS10405 NONE
CL52_RS10400 NONE
CL52_RS10395 NONE
CL52_RS10390 2293814 .. 2293840 -  -6.5  -3.14132   TCCCGGTGCGACCAA         CGTCAACGGCT TTGAC AGCCCATGACG         TGCGACCGGGATATC  53 508
        nhaA NONE
CL52_RS10375 2288615 .. 2288631 -  -2.9  -3.85817   ACGCGCTTTTAGAAA              CTGCAGC TAT ACCGCAA              GCACCCAAATGGCCT  56 256
CL52_RS10330 2281692 .. 2281722 -  -3.1  -3.50393   TTTCACTCCAGATAA      GCGGGGCCTGACGC CGAA GAGACAGGCCCT-C       AACTCATTAGAATTC  49 32
CL52_RS10325 2281415 .. 2281433 -    -3  -2.95919   ACTAGCTAACTAAAT             TTTCCCTC ACC GAGGGCAC             CCTGGTGCCTCTACC  42 36
CL52_RS10320 NONE
CL52_RS10315 NONE
CL52_RS10310 NONE
CL52_RS10305 2278878 .. 2278888 -  -8.2  -3.92542   TGGATGGTGAAATAA                 GCCC CTG GGGC                 TACTTAGCCCCAGGC  71 25
CL52_RS10295 2276729 .. 2276740 -  -5.8  -4.37886   TGAGGTGGCAGAAAA                GAGC GTTT GCTC                 ACGGTAAGTGGGCAC  71 258
        umuC NONE
CL52_RS10285 NONE
CL52_RS21075 NONE
CL52_RS10280 2272050 .. 2272068 -  -2.4  -3.35996   GACGGTTACTGAGAA             GAAATGCA ATG CGGATTTC             TCCTCTAAATATCCG  45 60
CL52_RS21450 2271214 .. 2271228 -  -5.6  -2.91264   TGGCGCAGCGACAGA               CCCCGG TCA CCGAGA               TAGCCATTGATCACC  48 457
        ltrA 2268853 .. 2268882 - -15.9  -2.75064   GGCCGCACGTAAGTA       CACCAAGTGTACC TACA GGTACACTTAGTG        ATCAGCCGTACTCTA  78 448
CL52_RS10255 2265764 .. 2265774 -  -8.2  -3.33525   GCGACTCACAGAACA                 CGCC GAA GGCG                 GCCATTCGAGCCCTC  60 117
CL52_RS10250 NONE
CL52_RS10245 NONE
CL52_RS21445 2259204 .. 2259215 -  -5.8  -3.15663   ACGCACGGTGACGAA                TGCG CTCA CGCA                 TCCGCCTCCTCTGGT  51 19
CL52_RS10235 NONE
        zorA NONE
CL52_RS10225 NONE
CL52_RS10220 NONE
CL52_RS10215 NONE
CL52_RS10210 2246657 .. 2246672 -    -4  -3.04144   TTTTGAGTTGCAAGA              GAAACT GTCG AGTCTC               AACTACCGCCTTTGT  45 181
CL52_RS10190 NONE
CL52_RS10185 2242786 .. 2242809 -  -3.2  -4.25104   CCTGCGCCACGAAAA          CACCT-GTG GACCAGA CACTAGGTG          CGCCTAGCCAGGAAG  64 19
CL52_RS10180 2240675 .. 2240689 -  -2.8  -3.21912   GTGGGAACTTATGAA               GAAGCT GAG ATCTTC               GATTAAGGAGGTGAT  44 29
CL52_RS10175 NONE
CL52_RS10170 2240394 .. 2240425 -  -2.4   -4.1043   GGTAAAGACCAGAAA      TCAACATTCATCAGC CAG GCTGA-AAATGCTCA      TTTCTAAACTCTAAC  57 47
CL52_RS10165 NONE
         rrf 2237022 .. 2237057 - -23.4  -3.34398   CCCGTTGCGCAAAGA    CAAACCCCCGACCAGC GAAT GCGGGTCGGGGGTTTG     GTATAGGTGCTTGAC 100 34
CL52_RS10155 NONE
CL52_RS10150 2233822 .. 2233847 - -19.1  -4.42386   GGGTGAGCGACAAAA         GAAACCCCGGC GACT GCCGGGGTTTC          TTTTTGTCTGTTGCC 100 40
         icd 2220921 .. 2220947 - -19.6  -3.53444   CCAGTCGCTCGGAAA         GAAAGGCCGATC TGC GATCGGCCTTTC         TTGCTTCACATGTGC 100 31
        clpS NONE
        clpA 2217631 .. 2217650 - -11.4  -4.84359   CGAGCGCGAGAAAAA            CGCCCGGT TCAA ACCGGGCA             TTTTTGTTTTGGGGC 100 73
        ftsK NONE
        lolA NONE
CL52_RS10050 NONE
        crcB 2209871 .. 2209886 - -10.4  -3.36327   GCACGTCATTCATAA              CCTGGC GAGC GCCAGG               CCGGCCCATGCCGCC  66 4
        serS 2208393 .. 2208403 -  -8.2  -2.80816   GGGGTATCCATCACA                 GCGG CTG CCGC                 TGCGCGTGCCCTTGT  54 140
        cysG 2206930 .. 2206947 - -14.1   -4.3467   ATCTGCATAGCAAAA             GCCCCGG TTCT CCGGGGC              TTTTTTTCGGGCTAC 100 43
CL52_RS10025 2206003 .. 2206018 - -11.8  -5.07011   CACACAAATGAAAAA              GCCCGC CGAA GCGGGC               TGATTCGATAGCACG 100 46
        tusD NONE
        tusC NONE
        tusB NONE
CL52_RS10005 NONE
CL52_RS10000 NONE
CL52_RS09995 2202469 .. 2202485 -  -5.1  -2.75844   GTTGGCAGCGGAAAT              CTGTCAG TTT CTTACAG              CGCGAGCCGCTCTAG  44 37
CL52_RS20335 NONE
CL52_RS09985 NONE
CL52_RS09980 2200626 .. 2200652 -  -3.7  -2.82491   CATATAGGCAGGATA        GCTGTGGGC-CTG CCG CCGTGCCCA-AGC        CAGGGTGTGGCGTTC  42 76
CL52_RS09975 2200047 .. 2200059 -  -5.5  -2.83403   TTTCTTTCAGCAAAG                CAGGA CGT TCCCG                GGGCGCGTCGGAGGA  48 93
CL52_RS09970 2199165 .. 2199175 -  -8.2  -2.57468   GGTCACGATATTAAG                 GCGG TGG CCGC                 GGCAATTGCTGACAG  53 74
CL52_RS09965 NONE
CL52_RS09960 2197117 .. 2197130 -  -5.2  -3.53811   CGCACCTGCGCGAAA               CGGC TACCGC GCCG                TTGCTGCATGATGCC  54 448
CL52_RS09950 2194953 .. 2194987 -  -3.4  -2.52464   CCTGGGCTGAAGCGA     CCGTGACAGCGCACCA TGA TGGTCCACCGTGCCAG     GCATCGCCAGTCATA  39 36
CL52_RS09945 NONE
CL52_RS09940 NONE
CL52_RS09935 NONE
CL52_RS09930 2190590 .. 2190617 -  -2.1  -3.40073   AGGCTTATCAATCAA       CGC-GCTATG-GCT TAA AGCTCA-AGCCGCG       TGAGGTTTTACTTCA  47 33
CL52_RS09925 NONE
CL52_RS09920 2187169 .. 2187190 - -15.9  -4.73108   CGCAGAAAAGCAAAA           GGGGAAGCC GTGA GGCTTCCCC            TTGAAGGGATCGTGC 100 518
CL52_RS09910 2183910 .. 2183960 -  -4.7  -2.93382   GCCGACATGCAGACA CAGCTCAACGCCGCGC-GCCTGC TCATTCT GCATGCAGCGCGGC-TCAAGTCG GCGGGGCTGCCCTGC  44 254
CL52_RS09880 2177380 .. 2177397 -  -2.6  -3.27298   GTGCTCAAGGAGGAA             CTGCCG GCCGAG CGGGAG              AGCCGCTTCAGCGCC  44 61
CL52_RS09860 NONE
CL52_RS09855 NONE
CL52_RS09850 NONE
CL52_RS09845 NONE
CL52_RS09840 2165881 .. 2165907 - -12.3  -2.71712   CCCCGCGGCGGAAAT        GC-CCGAGCGCGC CTG GCGCGC-CGGCGC        CACCGTGATCCACGT  65 151
CL52_RS09750 2146500 .. 2146523 - -10.9  -2.53263   CTGACTGCCAATCGA          GTGCGCCGC CTCCGC GCGGCGCGC           CATTTTCACACATGC  62 31
        hemH 2145019 .. 2145053 -  -4.9  -3.28712   CGCCGGTGGCCACAA     GGCCGGCGATCAG TTCCTGCGC CTGGTCGCCGAGC     GGTTGCAGAAGGCCG  49 422
CL52_RS09705 2139095 .. 2139153 -  -5.3  -3.04398   TCGTGCGCTGAAAAG TGCCGGCATTGTA-GCGCAGCCATTCCG GCAAGT CGGAACTGC-GCGCATCCACCGCCGGC- ATGGCCCGCCCGCTC  47 39
CL52_RS09700 2138112 .. 2138136 -  -9.2  -2.70932   CCTGCTTCGGAACGA          GGCCGGCTCA GGTGT CGAGCTGGCC          CGCCAGGAATTGCAT  57 8
        pqqF 2135550 .. 2135568 -    -3  -3.30243   AGCCAGGGTTCAGAA             CAGCGAAG CGG CGTTGCTG             ACGACCTGCCAGCGA  46 1
CL52_RS09690 2133935 .. 2133970 - -13.2  -3.92869   GCAGCGACGCAGAAA    TGCGAAAGGCCGGCCC TTGC GGGTCGGCCTTTGGCT     GGAGGTCGGGGCGTG  83 128
CL52_RS09685 NONE
CL52_RS09680 2129647 .. 2129670 -  -8.9  -3.12606   GCACAGATGACCGAA          GCCATCGAG CAGATC CTCAATGGC           AACGTCTATCTGCCC  58 401
CL52_RS09635 NONE
CL52_RS09630 NONE
CL52_RS09625 2118960 .. 2118980 -  -6.9  -3.12327   CGCCGACAGGGAAGA            TTTCCCG GTTCGTG CGGGAAA            ACTTCCCGGCGCCGC  53 265
CL52_RS09620 2116292 .. 2116302 -  -6.8  -4.17048   GGTGGTGCAAAAGAA                 CCAG GAC CTGG                 CGCAAGCCGCCGTGC  72 244
        pedF 2110362 .. 2110380 -  -3.9  -2.63616   ACCAGCAACAGGAAC            CGGTGCAT GGCG AT-CACCG             CTTGGCCGCTTCGCT  41 20
CL52_RS09580 NONE
CL52_RS09575 2108625 .. 2108637 -  -4.7  -3.03309   CGGCAAGAAGAATCA                GGCGC ATG GGGCC                TCCCGAAGCGGGGAA  47 68
CL52_RS09570 NONE
CL52_RS09560 NONE
CL52_RS09555 NONE
CL52_RS09550 NONE
CL52_RS09545 2097026 .. 2097072 - -13.7  -3.24747   CGCCGACATCATCAA GGCCGCCGAACACGTCAACCGC AGGA GCCGCTGA-GCGGTCGGCAGCC GCCTTACCGCGTCTG  76 29
CL52_RS09515 2087435 .. 2087470 -    -6  -4.67353   TCAGCCATGCAAAAA    TCCTCCGTCAACGGGT TGGA ACCTGTGTTCGGAGGA     CTGAGGGCGCCTGGC  76 83
CL52_RS09510 NONE
CL52_RS09505 NONE
        ligD 2084602 .. 2084616 -  -9.2  -2.79183   TCCAGCGGTATGACA               GGCGGC GCG ACCGCC               TGGCGCGCCGGGTCG  57 42
        fdnG NONE
        fdxH NONE
CL52_RS09480 NONE
        fdhE 2078645 .. 2078664 -  -7.8  -2.72991   GGAGATCGGCAATTA            CCTCGGCC TGAC GACCGAGA             CGATCAGCCGCCTGT  51 233
CL52_RS09445 NONE
CL52_RS09440 NONE
CL52_RS09435 NONE
CL52_RS09430 2068106 .. 2068120 - -11.4  -3.53224   TACCTCTGGCGTAAA               CGCCGA CGC TCGGCG               CGCGCTCTCAGTGGC  71 33
CL52_RS09425 2066980 .. 2066998 - -11.7  -5.28481   CATGGAATTAAAAAA             GGCTGCC GCGCG GGCAGCC             AGGATGACGTGCCGT 100 148
CL52_RS09420 2066490 .. 2066528 - -13.8  -3.90112   GCTCGGCCAATGAAA   TCGACGTGGTGCAGGAAG CGG CCTACGGCACCGCGTCGA   TCAGCCAGACCGGCG  84 191
CL52_RS09400 2061918 .. 2061953 -  -3.8  -3.15544   TTCTACTTGCACGAA    CGTGC-CTGGCAGCGGC TCG GTCATCGCCGGAGCACG    CGAAGCCACAGTTAT  45 110
CL52_RS09385 2059482 .. 2059496 -  -2.7  -3.78234   ACCCAAAGCCAAGAA               CCGCC TGCTG GGCGT               GAGCTTCGAAACGAT  56 356
        glgA NONE
        treZ NONE
        malQ NONE
CL52_RS09360 NONE
CL52_RS09355 NONE
        glgX 2048099 .. 2048119 -  -8.1  -3.69216   CCGTCACGGAAAAGA            CAGCCCGCC TGC GGCTGGCAG            GACGAATCCGCTTGT  69 157
CL52_RS09345 2047059 .. 2047073 -  -2.7  -2.79831   CCAAGGGCGACGAGA               TCGCC TGGAT GGCGG               CGCTCGGCAGCCTGC  40 156
CL52_RS09325 NONE
CL52_RS09320 NONE
CL52_RS09315 NONE
CL52_RS09310 NONE
        clsB NONE
CL52_RS09300 2038894 .. 2038910 - -11.5  -4.26351   TAGCAAGTGAAGAAA              GCCGGCC TCG AGCCGGC              TTTTTTCATTCAGCG  89 35
CL52_RS09290 2035511 .. 2035541 - -24.2  -2.57564   GCATGGCGTGACAAG       GCAAAAGCCCCGGT TCG ACCGGGGCTTTTGC       TATTCAGCGCCAACG 100 62
        xthA 2024477 .. 2024492 -  -6.1  -3.15212   AACGATGACAGCGAA              GGCTC TGCGAC GAGCC               TTTCAGGGCGGCTCT  51 45
CL52_RS09250 2022993 .. 2023008 - -11.8  -4.25104   GCCGGTTGAGGAAAA              GGCCGC ACTA GCGGCC               TTTTTCGATCGGGCA  91 51
CL52_RS09240 2020406 .. 2020422 -  -4.3  -3.61398   GGTGTTCTTCAACAA              CGACGAC CTG GCCCTCG              GTGCGCTGTTTCGCG  52 292
CL52_RS09215 2015092 .. 2015120 -    -6  -3.28712   CCCCCGGCCGCACAA       CCTGCACGGC-CAG ATC CTGCGCTG-GCAGG       AAGCTGCGGGAGACC  53 518
CL52_RS09180 NONE
CL52_RS09175 2003817 .. 2003833 - -10.9  -3.15544   GCTCAGGCGGATTAA              TCCACAG AAT CTGTGGA              CAACCCGGTGCATAG  67 166
CL52_RS09170 2001762 .. 2001780 -  -5.2  -3.13403   CCTGTCGGACGAAGA             GCGCCG CAACTAT CGACGC             TTCCTTGCTTCGCGT  49 222
CL52_RS09130 1990190 .. 1990219 -  -4.3  -2.78679   TGGCCTTATCCAAAT       GATGCG-CTCAGAG GAC CCATGAGTCACATC       GGAATTCAAAAAAAA  42 254
CL52_RS09125 1989786 .. 1989810 -   -10  -4.65153   GCATACAAAGCAAAA         GGCCCGA-GGC GGTT GCCGTCAGGCC          TTTCTGCACTGAACG  95 52
CL52_RS09120 1989382 .. 1989402 -  -5.4  -3.02511   GCGATCGGCCCAAGA            GGTCTCGT TTCCC ACGAGACG            GGGTCACTCGGTGTG  47 49
CL52_RS09115 NONE
CL52_RS21335 NONE
CL52_RS09110 1986965 .. 1986979 -  -5.6  -2.86164   TGGTCAACGAGGACA               GCCCGC TCA ACGAGC               GCATCAACTATTATC  46 330
        metH NONE
CL52_RS09090 1980072 .. 1980082 -  -2.4  -3.53012   CGGCCTGCGTGGAAA                 CAGG CCG CCGG                 TGAGGTTCAGGCATC  47 32
CL52_RS09070 1976305 .. 1976324 -  -3.4  -3.53091   ATGCGCGGGCGTAAA            GGGCAGCG CCAG CGGTGCGC             TCAGTCGCTGAAACG  49 26
CL52_RS09065 1975193 .. 1975211 -  -2.3  -3.48024   TGCCAGGATGAAATA            CG-CGCCG CCGT CGGCTTCG             GTTACCGGGCTGGGA  47 27
CL52_RS09060 NONE
CL52_RS09055 1973352 .. 1973387 -   -11  -3.15544   TTTGATGCGGATCAA    CCGCGAAGGCACTCGC TGCT GCGAGCGACGCCACGG     CCGCCTAGAGGTTGG  67 30
CL52_RS09050 NONE
CL52_RS09045 1972332 .. 1972342 -  -2.4  -3.44552   ACCGCACCAACAAGA                 CAGC CTG GCGG                 ATGCTGCAGCCATCT  47 104
CL52_RS09040 NONE
CL52_RS09035 1969766 .. 1969790 - -13.5  -4.07568   CCTGTTGCGCTAAAA          CGGCCGGAAAG GCG CCTGCCGGCCG          ACGGAAAGACAGGCG  90 162
CL52_RS09030 NONE
CL52_RS09025 1967736 .. 1967746 -  -4.6  -2.70022   CTTAGGCCAGATAAC                 CGCC GTC GACG                 TTTAACGATACGCCG  44 1
CL52_RS09015 NONE
        pqqD NONE
        pqqE 1947042 .. 1947054 -  -4.7  -3.05963   AGCGTCAGCGCAAGA                CCGGC GCT GACGG                TTCCGCCGAACGAGT  47 40
CL52_RS08935 1946371 .. 1946385 -  -5.6  -2.50074   GCGCTCAGAACAGAT               GCAGGC CAT GACTGC               CGGCCGCCATCGAAA  45 0
        serC NONE
CL52_RS08925 NONE
CL52_RS21330 1936268 .. 1936294 -  -6.7  -3.24021   CCCGGAAAGATCGAA        GCGC-GAAC-CAT AGC ATGCGTTCAGCGC        ACTGGCGTTGACCTG  53 74
CL52_RS08905 1935637 .. 1935656 -  -5.7  -3.72576   GGGTGTTCGACGAAA            CGCTCGGG ATCCA CCCGA-CG            GCGGCGGAGGAGTTC  57 121
CL52_RS08895 1933836 .. 1933855 - -10.6  -3.91897   TTCTTGATCGATAAA            GGGCTGCC GGCA GGCGGCCC             TTTTTCATTTTCCGA  76 30
CL52_RS21055 NONE
CL52_RS08885 1930775 .. 1930825 -  -6.8   -3.7732   GTTTCAGATCAAGAA GACCTGA-G-TTGGCGACCACCTG CAGTC CGGGTGGCCGCCAATCGCCTGGGC TCAGAGGCGGAACTG  62 26
        hemN 1929132 .. 1929145 -  -3.7  -2.78596   GATGCGCGCATGACA               CCGGG GACG CCAGG                CCCCAACGACGACTG  42 144
CL52_RS08875 NONE
CL52_RS08870 1924928 .. 1924962 -  -6.2  -4.56597   TCGTTTGCCGAAAAA     GCGCCCCGAAGCCGGC GCT GCCGACTGCCAAGCGA     AAGCCATACCCGTTC  76 307
CL52_RS08860 NONE
CL52_RS08855 1923712 .. 1923731 -  -4.8  -2.95388   GACTGAATCCATAGA            GGCCGTGC GCCA GCGCGGGC             AGCTTGCCGGCCTGT  46 43
CL52_RS08840 1921420 .. 1921444 - -15.8  -2.51547   CCTCCATATCAAGAG          CCCCGCAGAT GATGA ATCTGCGGGG          TTTTTTGTTTCTGGC  76 52
        gloB NONE
CL52_RS08790 1913038 .. 1913056 - -10.3  -3.55444   CGGGCACCCGGGAAA             TCGGCGT TATCT ACGCCGA             CAGTCGGCTGTCCGG  67 142
CL52_RS08780 NONE
CL52_RS08775 NONE
CL52_RS08770 NONE
CL52_RS08765 NONE
CL52_RS08760 NONE
        fabI 1903345 .. 1903361 - -10.8  -5.27335   CCCGGCAAAGAAAAA              CCCCGC ACGGG GCGGGG              TTCTCCTGGGTGCTG 100 54
CL52_RS08740 1901219 .. 1901238 -  -5.6  -3.48276   CCTGCTGTGACAGAA            CGCGGACG CAAC CGTGCGCA             ACCGTGGGCCAAGGG  55 80
CL52_RS08735 NONE
        arcD NONE
        arcA NONE
CL52_RS08720 NONE
        arcC 1894974 .. 1895000 - -10.9  -4.07568   CTGCGTCGCCGAAAA        GATTCGCCTGGC CATT GCC-GGCGAACC         CATCGTGACCTCGGT  81 305
CL52_RS21225 1885713 .. 1885737 -  -2.8  -3.53091   ACGCGTTGTCTGAAA         TATCG-GGTGC TGTA GCACCACGCCA          GCGATTGCCGTTCGT  49 290
CL52_RS08680 1884404 .. 1884431 -  -5.6  -2.52464   TTGGCCGTCAACTGA       TCGCTGCCGCCG TCTGCG CGGCG-C-GCGA        GCAGCGTCTGGCCCG  44 329
CL52_RS08660 1881570 .. 1881586 -  -7.3  -3.18681   GCGGAACGGCATTAA              TCCACAA AGG CTGTGGA              TAATACCGTTGATAT  56 356
CL52_RS20625 1880781 .. 1880826 - -12.5  -2.87132   CTGGCCGCTGACATA CGCGCGGCCGTGACCGGCGC AGCCTAG GCGGCAATC-CGGCGGCGCG GGAGTTGCGGACCGG  70 80
CL52_RS08620 1871194 .. 1871210 -  -8.7  -3.34233   CGAGAAGCCCTACAA              CGAGCAA TTG CTGCTCG              ATAGCGTGCAGCAGG  58 320
CL52_RS08605 1866683 .. 1866732 - -10.1  -2.52464   GTTGTTGTGAACGGA TGCCGCC-GGCAGCCGCCATCCC TGCAAC GGGATGGCAG-TACCAGGCAGAA AAAAGCGGGGTCAGG  59 36
CL52_RS08600 NONE
CL52_RS08595 1863748 .. 1863766 -  -4.5  -4.20516   GCGCCATGTAACAAA            GGCCGCGC AGCG ACG-GGCC             TTTTCGTTCCTGGCT  63 188
CL52_RS08590 1861794 .. 1861806 -  -6.2  -3.54424   GGGCAGGCCCGCAAA                GGGG TTCAT CCCC                ATCGCCACAGGCGGC  57 18
CL52_RS08585 1860719 .. 1860747 -    -3  -4.46112   GCGGAGGTAAAGAAA       TCGATCGGCGCGG TTAT CCG-GCCGACTGC        CTGTCAGCGCTTCGC  67 49
CL52_RS08580 1859809 .. 1859825 -  -2.9  -3.65827   GAACGCCGACGTAAA              CGATGCA GGG TGCAACA              AAAAGCTGCTATCGG  51 125
CL52_RS08575 NONE
CL52_RS08570 1857811 .. 1857857 -  -3.5  -3.51825   TTACGGCAAGGACAA CCCCGCTGCCGAACCGGCTCAG CTCG CTGT-CCGAGTCGGCACCCGGC TAGCCTGAACCGAGG  49 25
        folD 1855243 .. 1855260 - -12.7  -4.86621   AGCTCGAATGAAAAA             CGGCACC ACCA GGTGCCG              TTTTTCGTTTCCGCT 100 46
CL52_RS08535 1851505 .. 1851525 -  -2.5  -3.53745   CAGATCGGAAATGAA            CAGGATCAC TCG ATGATCTCG            GCCTTCTCGATCACC  47 10
        lpxH 1850357 .. 1850397 -  -3.3  -4.11216   GCCGGACCTGCAAAA  CAAGATGTCGCGGCT GGCTCGCGAAG AGCTGCGACATTTCG  AGCAGGTGCTGGCGA  59 419
CL52_RS08520 1848786 .. 1848802 -  -5.8  -3.40403   CGGCTCCGAGGAGAA             GCGCGCC GTCT GGCGC-C              GGCTGGAGGCACTGC  53 370
        acnB 1845571 .. 1845599 - -16.8  -5.60864   GATAGACGAAAAAAA       GCCCTGCGGCAGG GTTT CCTGC-GCAGGGC        TTATCACTCAGGTGG 100 69
CL52_RS08470 1837488 .. 1837504 -  -9.4  -5.24796   GTCAGACAACAAAAA              GTCCGC ACGAA GCGGAC              TTTTTGTTGTCTAGC 100 51
CL52_RS08440 NONE
CL52_RS08435 NONE
CL52_RS08430 1827356 .. 1827369 -  -5.9  -2.50816   CGGCCAGCGATCAAT               CGCGC TGCG GCACG                TGGCCGAACAGTTCT  45 7
        pabB 1825923 .. 1825941 - -13.1   -3.1637   AGAGAGCGGCAGGAA             CGGCGCC CAGGT GGCGCCG             TTTTCGTTTGCCGTC  73 39
CL52_RS08415 1824307 .. 1824322 -  -3.2  -3.62046   TCAGTGTCGGAACAA              GGCG GATCTCGA CGCC               CTGTTCGAACACGTC  49 63
CL52_RS08400 1820921 .. 1820944 - -18.2  -3.44325   AGGGCGCAGAATGAA          GAACGCCGGG CTAG CCCGGCGTTC           TGGTCGTATCAGGTG  95 34
CL52_RS08390 1819965 .. 1819982 - -12.7  -5.28176   TTCAGGCATAAAAAA             GCCGACC CTGG GGTCGGC              TTTTTTGCTTCAGCT 100 45
CL52_RS08370 NONE
CL52_RS08365 NONE
        greB 1813879 .. 1813913 -  -9.3  -4.19817   CGCACTCATCGAAAA    GGTGAAGGGTCGAGGG CATT CCCTTG-CCGTTCACC     GCGCCAGGCGCGTAC  79 264
CL52_RS08355 1812892 .. 1812918 -   -15  -2.78384   TTCTGCCCTACCAGA         GGGGCGCCGGGC CGG GCCCGGCTCCCT         GGGTCAAAGGCCTGC  75 29
CL52_RS08350 1811636 .. 1811673 - -10.6  -3.28712   GCTGGCGGCCTACAA   CCTCGGGCCGCA-GC GGGTGCAGA GCATGCGGGCCGAGG   CACGGCGGCGCGGGC  66 204
CL52_RS08340 NONE
CL52_RS08335 1807892 .. 1807902 -  -6.8  -3.01712   GTGTTCGGCTGAAGA                 GGCT CAG AGCC                 GTAACTGGCCGATCG  51 18
CL52_RS08295 1799297 .. 1799329 -  -5.5  -4.43877   GAAGCGGCAAAGAAA      GAGGCGATTCTCC CCCGCCC GGAGCACCACCCC      TAGGGCCCCGGGGCG  74 42
        fabA NONE
        fabB 1790828 .. 1790845 - -14.1  -5.95166   CTGAACCAAAAAAAA             CGGCGCC CGTG GGCGCCG              TTTCCTTTACTCGTA 100 54
CL52_RS08215 1783474 .. 1783493 - -16.4  -2.78384   CGCGCCGCTAGGAGA            GGCCCGGC AATC GCCGGGCC             TTTTCGTTTCTGCGA  81 41
        gltA 1763725 .. 1763747 - -17.8  -4.91109   CCCGTAGGAGAAAAA           GAAGGCTGCC CTA GGCAGCCTTC           TTTCTTAAACCAGCC 100 45
CL52_RS08125 1762289 .. 1762307 -   -16  -4.62069   TCGGGATTGCAAAAA             GCGCTGGC ATT GCCAGCGC             TTTTTTTGTTCGCTC 100 68
CL52_RS08080 NONE
CL52_RS08075 1747382 .. 1747408 -  -6.4   -3.2794   TTCGATCCACAGCAA         TGCGGCGATCGG CAG CCATCCGCTGCA         TCCGATGATGATCCA  53 486
        coxB NONE
        ctaD 1743738 .. 1743751 -  -6.7  -2.79796   GCGTACTTCATCAGA               CACCT CCCC AGGTG                CCGGGAAACAGCACG  49 7
CL52_RS08055 NONE
CL52_RS08050 1742205 .. 1742244 -  -9.3  -3.63991   CACGACCGCGAAGAA  GTCACCTGTCACCTGCGC CGGTT GTG-AGGCGGCAGGTGAC  CTCGGCCAAGGCTTG  68 337
        acnA 1738287 .. 1738311 - -20.1  -4.68424   GAAGGGACGCAAAAA          CGCCGGAGCAA GGA TTGCTCCGGCG          TTTCTATTTGCGCTG 100 48
CL52_RS08030 1735942 .. 1735963 -  -8.6  -3.65902   CTGAGTGGAGGCAAA           CGGCCGCC CAGTCC GGCGGCCC            GGCTAGAGGAGGAGT  65 475
        ccoN 1734218 .. 1734230 -  -3.3  -2.52464   CGGCTCCTCAAGCGA                TCTGC GCG GCAGC                GTCATATTCCGCCGG  39 5
        ccoO NONE
        ccoP 1732537 .. 1732556 - -13.6  -2.92653   GGACAAGGCCAGAGA            GGCGGTAC GAGT GTACCGCC             CTCTAGGACTTTTTA  74 38
        ccoN NONE
        ccoO NONE
CL52_RS07995 NONE
        ccoP 1729017 .. 1729047 - -17.6  -3.35679   CGCCCGGAGGTATAA       GGTCAGGTGCGACA GGT CGTCGCCCCTGACC       TCGCCGAATCACTTC  91 34
        ccoG NONE
CL52_RS07980 NONE
CL52_RS07975 NONE
        ccoS 1724347 .. 1724358 -  -5.8  -2.75535   GCAAGAGTTCAATCA                TCGC TACG GCGA                 TCCGCGTCCTTGACG  46 7
CL52_RS07965 1723591 .. 1723608 -    -4  -3.43492   TGATACCTACGACAA             GACCGC ACACAA GCGGGC              CTTGCCGAAGGAGCC  51 51
        hemN 1721164 .. 1721177 -  -3.7  -3.76373   TCGGCAATATCCAAA               CGGCC CAGT GGTCG                CAGGCGCAGCTTTTG  56 59
         fnr NONE
CL52_RS07945 1719749 .. 1719788 -  -2.8  -2.74012   TGAGCAGGCCAATCA GCAGGAGGCGTCCAAGGC GAGCGG GCATCGGTC-CC-CCTGC  AGGCCGTCAGCGATC  40 32
CL52_RS07940 1719043 .. 1719063 -  -3.9  -2.71144   GAGTCGGCCGAAGCA            GGGGAGC GTGACCT GCTCGCC            GAATGGGCGCGCAAC  41 121
CL52_RS07890 1706615 .. 1706628 -  -8.1  -2.78384   GGCGTTGGCAGCACA               CACGC TGTG GCGTG                CCTATAGCCAGCGTG  51 398
CL52_RS07880 1704985 .. 1705000 -  -6.1  -3.31144   CGCCGACCGCGACAA              GGCCA GCAAAG TGGCC               GGCAAGTTCCGTGGC  53 233
CL52_RS07865 1702798 .. 1702810 -  -3.3  -3.53012   GGTCCCTGGGGCAAA                GCGAG GCT CTAGC                GCTTCGGCGCGAACG  49 21
CL52_RS07830 NONE
CL52_RS07825 1696790 .. 1696815 -  -4.6  -3.02144   GCAGTGCCGTGAACA         CCAGGCGCTG TTTCGC CAGCGGCTCG          TTCCGACCGGGCGTT  47 39
CL52_RS07815 1695062 .. 1695090 -    -3  -3.90112   CGGGTGGTAACGAAA        GGGGCTGGCC GTGTCAGCG GGTCAGCGCC        TCGGTGTTGGGTACG  56 10
CL52_RS07810 NONE
CL52_RS07805 NONE
        folE 1693359 .. 1693373 -  -7.1  -5.08824   GTTCGACTGAAAAAA               CGGCT CCGGT AGCCG               CTCGGACGATCAGGC  86 63
CL52_RS07785 1690972 .. 1690991 - -13.6   -4.8622   CTCCTGAATGAAAAA            GGGCGAAC TTCG GTTCGCCC             TTTTTTGTGCCTGAG 100 58
CL52_RS07715 NONE
        ubiG NONE
        mupP 1669855 .. 1669865 -  -2.4  -3.58343   GTCAGCAGCGGCAAA                 GGGC ATG GTCC                 AGCACGCTGCGCAGC  49 1
CL52_RS07700 1668933 .. 1668950 - -11.3  -5.35224   GCCAGAAAAAGAAAA             GCCACTG AATT CAGTGGC              TTAGAGGAAAACTAT 100 139
CL52_RS07695 1667903 .. 1667932 - -18.1  -3.66178   GTCGTGAACCCTAAA       TGAAAAAAGCGCC TGCG GGCGCTTTTTTCA        TTCCTGGTCGAAGCA 100 23
CL52_RS07600 NONE
CL52_RS07595 NONE
CL52_RS07590 1646242 .. 1646252 -  -2.4  -3.54935   TAAAGCCTGGGTAAA                 GACC TCA GGGC                 GCGTACAGGTAGCCA  49 19
CL52_RS07585 1645645 .. 1645689 - -24.4  -3.59979   GGCCTCCACGGCAAA GCCCGCCGCCGACGCAGCCAC CTCA GCGGCTGC-TCGACGACGGGC GGTCAGAATGATGGA 100 45
CL52_RS07580 1643957 .. 1643983 - -11.6  -4.08216   CGAGGCTCTGGAAAA        GGCGCGCCGCA TGCCGC TGCGG-GCGCC         TTTGCTGGTGGCGGT  82 333
CL52_RS07565 1641298 .. 1641322 - -11.3  -3.14132   CCTGGCCCTGAGCAA          GGCCGGCAGCG CAG CGCTGCAGGGC          ATCGGGCGCGGCATT  64 331
CL52_RS07550 1639097 .. 1639121 -    -7  -3.53012   CGTCCGCTCGCCAAA          CGGGCAGCGC CGATT GCGCTGACGG          CCGGTCAGAAGCGGA  57 30
CL52_RS07545 NONE
CL52_RS07540 NONE
CL52_RS07535 NONE
CL52_RS07530 1635399 .. 1635444 -  -6.1  -2.78384   GGGTGCGTGACCAGA TCGA-TCCGGGGCGTTCGCT CGGTCAC AACGACCGCCCCTGATTCGC TCAGGCAACGCCCGG  46 26
CL52_RS07520 1632448 .. 1632461 -  -6.7  -2.59421   CTAATAATTAGCAAT               TCTGG AAAC CCAGA                CCTCATGTTTACCGA  48 463
CL52_RS07505 NONE
CL52_RS07500 1628869 .. 1628885 -  -7.9  -2.52543   ACCTGCTGGAAGGTA              CGCAGCG CTT CGATGCG              TTGTTGCGGCCGTTC  49 123
CL52_RS07490 1627438 .. 1627448 -  -6.8  -4.08216   TTATGCTCGGTAAAA                 GCCA GCA TGGC                 TGCGCTGTGACCCGT  67 211
CL52_RS07470 NONE
CL52_RS07465 1622260 .. 1622276 - -13.7  -2.63596   GCTGACGTTAGACGA              CGCCGCT GCG AGCGGCG              AATCCGCCGGCTGGC  71 60
CL52_RS07460 NONE
CL52_RS07455 1620160 .. 1620194 -  -9.8  -2.70143   ATTGGAAGCACAGGA     GGCACTGCGCGGCTTC CAC GACACCGCGCGGCGCT     TCTTCGATGGCGATC  57 404
CL52_RS07435 1617702 .. 1617722 -  -5.3  -2.74012   TGATCATGGCAACCA            GCGCCTG CCCGGTC CTGGCGC            GGCTCAAGCCGATGG  45 408
CL52_RS07420 1613122 .. 1613142 -  -8.9  -3.28712   GTTCTTCGGCCAGAA            CCTGATCGC CGA GCGACCTGG            CGAGTTGGCGGTCGG  58 70
CL52_RS07400 1608455 .. 1608499 -  -4.8  -5.47159   GTTGAACATAAAAAA CTCTGCCTCACCGGCCGGCCC GCGA GGGCCCGCCGATTTGG-AACG CAAATGAGATAGTGT 100 125
CL52_RS07395 NONE
CL52_RS07390 1605725 .. 1605743 -  -6.7  -4.14511   AAGGCGACTGGAAAA            CTGCGAGC CGTG GCTCGC-G             TTGCGGGGCGATACG  69 66
CL52_RS07385 NONE
CL52_RS07380 NONE
CL52_RS07375 NONE
CL52_RS07370 1600786 .. 1600797 -  -2.2  -3.75897   AAGCGTGAACTGAAA                GTCG TCAT CAAC                 CTGAATCCTTAGGTT  52 65
CL52_RS07365 NONE
CL52_RS07360 NONE
CL52_RS07355 1597606 .. 1597620 -  -4.2  -3.08133   GACGGAGTTATTGAA               GCTCAC GGT GTGAGG               CGGCGTTTTCGAGGT  45 350
CL52_RS07350 1596434 .. 1596452 -   -16  -5.37593   GGCGAAACGAAAAAA             CCCCGCCA GGT TGGCGGGG             TTTTTTGTGCCCGGT 100 50
CL52_RS07260 1578656 .. 1578676 -  -8.9  -5.73978   ATGAGAAAGAAAAAA            CCGCTGGAC CCG GTCCGGCAG            GCACAGAAGAACCGT 100 156
CL52_RS07180 1564880 .. 1564892 -  -4.7  -3.71848   CCGCTTTACCAAGAA                GCTGG GTG CCGGC                GTTGCGCAGGAGCTT  55 89
         rne 1558676 .. 1558708 - -22.9  -3.53012   CGGTCTTGCCTGAAA      CGAAAAAGCCCCGGT GAT ACCGGGGCTCTTTCG      TTTCAGGGCACACAA 100 63
CL52_RS07115 1550762 .. 1550776 -  -4.2  -3.01712   TCGCCGCCTTCAACA               TCATCG CCA CGCTGA               TCATGGTCGTTGCCG  44 400
CL52_RS07095 NONE
CL52_RS07090 NONE
CL52_RS07085 1545760 .. 1545780 -  -6.8  -2.62616   CCATTCCGGAGATCA            GCTCGATC GGCAA GAACGAGC            GCGAGCTGACGCAGG  47 499
         mfd NONE
CL52_RS07025 NONE
CL52_RS07020 1529204 .. 1529222 -  -4.4  -2.71712   GGCCGGCGGGCAAAG             CCTGGGGC GCA GCTTCAGG             GCAGCGGTGCGAAGA  42 21
CL52_RS07015 NONE
CL52_RS07010 NONE
CL52_RS07005 1525627 .. 1525650 -  -2.2  -3.01791   ATTGCTCGCTCAACA          GCCCGGTGGC GTCA GTCATGGGGC           GTGCCGTGCCGGTTC  41 139
CL52_RS07000 NONE
        pdeM 1522200 .. 1522220 -    -4  -3.51034   CACCTACAGCAAAGA           CGGCAACAC GGCA GTGCTGC-G            AACCGATTCCGAGCA  51 200
CL52_RS06985 1520357 .. 1520391 -    -5  -4.52857   AGGGCGGATAGAAAA    GCGCTGCGCCGCCCTC TACTG GAGGACCGC-CAGC-C    AACCGGGTGGCAGAC  71 281
CL52_RS06950 1512221 .. 1512237 -  -2.2  -2.52896   CCATCCCCCAAGCGA              GGGC GCTAGTGTA GCCC              GTTGCCGCCAGCCGG  37 48
CL52_RS06945 1509429 .. 1509451 - -13.4  -2.71712   GTCGGGGCGGCAAAT           CAGGAGGCGC GGT GCGCCTCGTG           TTCGAGTCGTTCGAT  72 2
        mnmC 1507398 .. 1507412 -  -2.1  -2.91873   AGTATGTGGAAAGCA              CGATCG GCCG CGA-CG               CCTACCCCTCGCCGC  40 27
CL52_RS06935 1506678 .. 1506700 -  -9.1  -3.03159   CCAACGCTTCGAACA           GCAGCGCGT CCATC AGGCGCTGC           CGCCTCGGCGCCGGT  60 108
CL52_RS06930 1505746 .. 1505760 -    -7  -3.14132   CGTTGGTTCGACGAA               TGGCGG CTG CCGCCG               CTCTCGGCAGGGCGG  52 200
CL52_RS06920 1504460 .. 1504510 -  -7.3  -2.79183   GCGAGGGGCAGCAGA CGGCCAGCGCACTCAGCCGGCGGG TCAG CCTGACGGCGGCA-ACGCTGTCCG GTGTGCTGGATCGAC  48 262
CL52_RS06910 NONE
         ngg 1500441 .. 1500473 -  -9.8  -3.20991   TGCAAGGGAATGGAA     GCGCG-CCGGCCGTGC TTC GCGCGGCCGGTCG-AC     AGAGAGGCCTGCTCG  64 45
CL52_RS06900 1499070 .. 1499101 -    -3  -5.02074   CGAGCGCGCAAAAAA     GGCTGCCGTTTGGC GTCAAT GCCCA--GGCAGCC      CGGAAAACATCCGCT  78 120
CL52_RS06895 NONE
CL52_RS06890 1495681 .. 1495707 - -13.6  -2.53876   CGTGAGTGCAACCGA         GCCGCGCTGGAG GCC CTGCCGCGCGGC         GAAGCCTGGCCGTTT  67 344
CL52_RS06860 1489086 .. 1489104 -  -6.6  -3.04144   GGCCCAGCCTGAACA             GCTCACCT GCC AGGCGCGC             GCGGCGCTTGGGCTG  49 229
CL52_RS06850 NONE
CL52_RS06845 1486605 .. 1486642 -  -6.9  -3.13899   AACGCCCGAGCAATA   CCTCTGGGCGCACCGCCG GTT CAA-GACGCGCCCGGAAG   GCGAGGCGAGCCTCT  52 59
        minC NONE
        minD NONE
        minE 1483528 .. 1483547 - -12.8  -3.37915   TTCCACAAACGAATA            CGGCGACC CGTG GGCCGCCG             TTTTTTATTGCCGGT  74 175
CL52_RS06820 NONE
CL52_RS06815 1481485 .. 1481509 - -15.7  -3.47227   CTGGAATGATCACAA          GGCGCCGGC CTTCTCT GCCGGCGCC          CATTTCGCTACGGCA  85 33
CL52_RS06805 1478169 .. 1478186 - -12.7  -5.10033   CGAAGACAAAGAAAA             GGGCCAC CGTG GTGGCCC              TCGTATTTCAAGCTT 100 95
CL52_RS06800 NONE
        flgA 1459992 .. 1460009 -  -4.1  -4.36914   GCGCCGCGGAGAAAA             GCGTC GAGCCTGT GACGC              GTTACATCGCGGCCT  66 27
        flgM NONE
CL52_RS06695 NONE
CL52_RS06690 1458138 .. 1458154 -  -8.7  -2.70275   CAATTGGATAGAGCA              TCCCCCT CCT AAGGGGA              AGGTTGTGAGTTCGA  52 130
CL52_RS06680 1457659 .. 1457670 -  -5.8  -3.22653   AGGATCGTCAGAACA                CCCA GCGC TGGG                 CTCTGGTGGGGGCGA  51 6
CL52_RS06675 1457400 .. 1457416 -  -2.2  -3.96148   TTTTGCTATCAGAAA              GCCAAT GTGTG ACCGGC              TGCCCATGCGCATGG  54 58
CL52_RS06670 1456853 .. 1456871 - -13.1  -5.31275   CGCTAGCACAAAAAA             GCCGGCG AACAA CGCCGGC             TTTTTTTATGTCTCG 100 55
CL52_RS06660 1454559 .. 1454580 - -15.9  -4.13767   TGCGCCATTTGAAAA           GGGCCTGCA GAAA TGCAGGCCC            TTTTTTATTGGCTAG 100 37
CL52_RS06600 NONE
CL52_RS06595 1443308 .. 1443325 - -14.1  -4.54727   GTCTTGAAAGCAAAA             CCCCGGC CGAA GCCGGGG              TTGATTGCATCAGAA 100 35
CL52_RS06585 NONE
        modA NONE
        modB NONE
        modC 1439233 .. 1439249 -  -3.5  -3.14468   GCGCACCAGATGCAA              GCGCAGG TTG CCGGAGC              GATCAAGCCAGCAGG  44 28
CL52_RS06565 1437940 .. 1437951 -  -3.6  -3.02511   GTTATGGCGGCAACA                CGCC GGAC AGCG                 GGTTCGATTGCAGCG  44 360
CL52_RS06495 1427631 .. 1427647 -  -2.1  -3.14468   GCGGATTAGAGCGAA              TGGGAGC TAT GCGCTCA              GCGGTAATAGCGCTC  43 23
CL52_RS06490 1426845 .. 1426855 -  -8.2  -3.53012   GGTTTCCGCCGCAAA                 GGGG CGG CCCC                 TGGCGCAGAGATCGG  63 74
CL52_RS06485 1426005 .. 1426025 -  -6.7  -3.62096   CCGCATTATGCCAAA            GCGCTCGCC GTC GGACAGCGC            CAGCGGACCGGCGTC  59 44
CL52_RS06480 1425349 .. 1425359 -  -2.4  -3.30124   CTGTAGGGTGGATAA                 CGGC GCA GCCT                 TATCCACCTGCCAGG  45 142
        napE NONE
CL52_RS06465 NONE
        napA NONE
CL52_RS06455 NONE
CL52_RS06450 NONE
CL52_RS06445 1418341 .. 1418359 - -13.8  -3.34344   CCAGGGCTGAACGAA             GCCGGCCG ATG CGACCGGC             TTGTGCCAGCCTCAG  77 37
CL52_RS06425 1412015 .. 1412034 - -12.1  -2.77629   ATATTAAAGCAGAAC            GCCCGGC GACTGG GCCGGGC             CTTGCGGGTGTTGCG  66 47
        dapE NONE
CL52_RS06415 NONE
CL52_RS06410 1409253 .. 1409279 - -18.1  -2.82623   CGGCCGCTATAAGCA         CAAAGCCCGCC GTGAT GGCGGGCTTTG         TCGTTTCCGGGCGGT  86 370
CL52_RS06380 1403035 .. 1403053 -  -5.9  -3.72576   GGTGGGGGGATGAAA             GTCCTGC TGTGC GCAGGCC             GCTGCCAGCGGGGCC  60 57
      blaOXA 1402184 .. 1402207 -  -3.6  -2.87132   GTGGGGTGGTATAGA          TCGCGGCTTC GCCG GCTGCCGCGG           AATTCGCCGGAGGAT  42 41
CL52_RS06370 NONE
CL52_RS06365 1401039 .. 1401052 -  -4.5  -4.07568   GGTGGGCGGGCAAAA               CCTGCG CGG CGC-GG               TGGTGGACCGGCAAC  61 92
        plsB NONE
CL52_RS06355 1397634 .. 1397644 -  -8.2  -4.07568   GGGCGGTGTGGAAAA                 GCGC TGC GCGC                 GTTTTCCACCCTACG  73 149
CL52_RS06335 NONE
CL52_RS06330 1391572 .. 1391589 -  -9.1  -2.52464   CGCGCCGCGAAGGCA             GCCCGAGC AAT GC-CGGGC             TTGGCCTGGCGATCA  54 107
CL52_RS06315 NONE
CL52_RS06310 NONE
CL52_RS06305 NONE
CL52_RS06300 NONE
CL52_RS06295 NONE
CL52_RS06290 NONE
CL52_RS06285 NONE
CL52_RS06280 NONE
CL52_RS06275 1381740 .. 1381752 -  -6.3  -3.86194   AAGGTCGCCCAGAAA                CTCAA GGG TTGAG                GGGCCGGCAGGGCGG  65 143
CL52_RS06245 NONE
CL52_RS06230 1372044 .. 1372054 -  -2.4  -4.56597   CGCTCTGGTGAAAAA                 GGAG ATG CGCC                 TGTTCCGCCCCTTCG  67 227
CL52_RS06190 1364412 .. 1364434 -  -3.2  -2.83915   GCCTGACAAAAAAGT           GCTGCACGGC TTC GCGGTGCGGT           TGTGTCAACCGTTTG  42 163
CL52_RS06185 NONE
CL52_RS06180 1363117 .. 1363143 -   -15   -4.7254   ATCGCGCATGAAAAA         GGCCCGGAGCGC TGA GCGTGCCGGGCC         TTGGTCAGGACGAGA 100 41
CL52_RS06110 1348242 .. 1348259 - -14.1  -5.28176   TGCAGGCAGAAAAAA             GCCGGGC AATC GCCCGGC              TCTTCGGTGATCCGC 100 44
         bfr 1347561 .. 1347584 - -14.6   -5.4505   CCGGCCAATAAAAAA          CGCCATGCCC TTGC GGACATGGCG           TTTTTTTATTGCGGT 100 52
        argF NONE
CL52_RS06090 1344863 .. 1344891 -  -6.6  -3.36327   CCAGCGCAGGCAGAA       CGGCCG-GGACGC CTGA GCGTCAGCGGCTG        CTGTAACGGCGAACG  55 16
        xseA 1337623 .. 1337633 -  -2.4  -3.53012   CGCCGGCTGGCGAAA                 GCCC GTC GCGC                 TTCAGAGTAGCGGCA  47 27
CL52_RS06055 NONE
CL52_RS06050 1336146 .. 1336173 -  -4.7  -4.26903   GCGACCCTAGCAAAA        CCGGCCTGCGG ACGAAA CCGCAGGGCAT         GCACTAGCTCAGCGA  68 34
CL52_RS06045 1334403 .. 1334416 -  -3.1  -3.32844   CCGGGTAGCCGAGAA               CCA-GG GAA CCGTGG               TCGGCAAGGACTTCG  46 406
        leuA 1329986 .. 1330004 -   -16   -4.7497   CGCAGGTACGAAAAA             GGGGACGC CTG GCGTCCCC             TTTGTTCAACGCCCG 100 43
CL52_RS06025 1328739 .. 1328757 -  -2.2  -2.77523   GCGTGACGAAGATCA             GGTAGCCC ATA GGCCCTCC             GTTGCGAAGGGCCGC  39 94
CL52_RS06020 1327829 .. 1327840 -  -5.8  -3.96531   CGACAGACTGAGAAA                CGCA TCCT TGCG                 TGGGGCCGGCATCTT  65 70
CL52_RS06015 1327043 .. 1327097 -  -4.1  -3.25823   CCTGCCGCAGATGAA GTGCGCACAGCATGCCGCCGTCCCCGG CGC CCGGCAA-G-CGGCCCGTTCAGCGCAC GGCCAGGCGCTCCTG  48 17
CL52_RS06010 NONE
CL52_RS06005 NONE
CL52_RS06000 1325638 .. 1325651 -  -5.3  -2.77043   GCGAGGATGGCAAAG               GCTAT CCAT ATAGC                GGCGACACGCAGGTG  45 175
        suhB 1306223 .. 1306256 - -21.1  -3.53444   CGAGGCTGCTGTAAA     CAGAAAGCCCCGGTC ACTT GGCCGGGGCTTTCTG      TTTCTGCGCTAACGC 100 54
CL52_RS05855 1299713 .. 1299729 -  -4.3  -3.17075   CTTCGGGCAATCCAA              CCCCTCG GAG CGATGGA              ATTTGCCCGATAAGA  47 281
CL52_RS05850 1299274 .. 1299297 - -16.8  -5.28778   ACCAGGCACAAAAAA          GCCCCTGATG TTGC CATCAGGGGC           TTTTCGGAGCTGAAG 100 42
CL52_RS05845 1298309 .. 1298324 -    -6  -2.53263   GGGACGTCCAATTGA              CCCCGC AATT GCTGGG               CACGGTGGTGGTCGA  45 422
CL52_RS05830 1294801 .. 1294839 -    -8  -2.62463   GGCAGCACGTAGAAC   TCGACGCGCGTCATGG TCGTGCG CCGGAACGCGCGGCGA   TCCGGTTAAGCATTC  51 39
CL52_RS05825 NONE
CL52_RS05820 1293905 .. 1293915 -  -4.6  -4.05714   ACGCGCAAGTATAAA                 GGCA AAA CGCC                 CCGGCGCAGTTCTTG  63 102
CL52_RS05815 1290706 .. 1290733 -  -8.4  -3.63515   CTCCATTTCCAAGAA        CCGGC-TCGAGCG TTT CACTCGATGCTGG        CAGACCTGCGGCCGA  65 313
        nhaD NONE
CL52_RS05805 NONE
CL52_RS05800 NONE
CL52_RS05795 NONE
        rlmF 1284792 .. 1284804 -  -4.7  -4.56597   CCTGGCGCTGAAAAA                CCCGC AGC GCTGG                GAAATCGCCGTCTGA  74 44
        yejK NONE
CL52_RS05770 NONE
CL52_RS05765 NONE
        mltF 1276885 .. 1276899 -  -3.4  -4.40561   CCTGTTGAAAAAGAA               CCGCGC CGA GCACCG               CGTGCACAGCTATCA  66 457
        glpD 1275123 .. 1275173 - -10.9  -3.01712   CGGCGCTGGTCAACA TGGTCGCCGCAGCGCGTCAGCTGC GCGG GCGGCTGGC-CGGCGCGGCGGCCT GAAACGCGCCGCGCG  66 41
        metR 1271635 .. 1271653 - -11.7  -3.86822   GAAGGGCCCGACAAA             CGCCTGC TGTTG GCAGGCG             GCCTGCTGTTCGGCG  79 78
CL52_RS05710 NONE
        csgE NONE
CL52_RS05700 NONE
CL52_RS05695 1266410 .. 1266461 -   -24  -2.90496   GCCCGGCCGAAACGA CAGAAGGCGGCCTGCGAACCGGAC GATGAG GTCCGG-TCGCAG-CCGCCTTCCG AAAAATCCCCGAGGG 100 111
CL52_RS05690 NONE
CL52_RS05685 1264370 .. 1264390 -   -14  -4.13995   TTGGCAGAAACGAAA            CTGCCGGC ACGAG GCCGGCAG            TTCGTCTGGGGAGAT  93 45
CL52_RS05680 NONE
CL52_RS05675 1262370 .. 1262407 - -15.5   -2.7497   AGACGACCCCTAAAG   CGCGCCGACGTTCGC TGCCCCTG GCGACCGGCGGCGCG    ATCGCTCAGCGGCCC  78 31
CL52_RS05670 NONE
CL52_RS05665 1261310 .. 1261327 -  -6.9  -2.50816   TCGCGACTGATCAAT             CCTGCGC GCGG GCGCAGT              TCGGCTCGACGGTAA  48 3
CL52_RS05655 NONE
CL52_RS05650 NONE
CL52_RS05645 NONE
CL52_RS05640 NONE
CL52_RS05635 NONE
CL52_RS05630 1253025 .. 1253042 -  -4.7  -3.86015   GACCTGTCGCACAAA             GCCAGGG CTGT CACCGGC              CCGCCGATGCATCCT  60 18
CL52_RS05625 NONE
CL52_RS05620 NONE
CL52_RS05615 NONE
CL52_RS05610 NONE
CL52_RS20590 NONE
CL52_RS20585 1246584 .. 1246598 -  -3.5  -2.90723   CTATCGTGAAGCAGA               TACCG TAGGC CGGCA               AAGGGGCGGCCATCT  42 127
CL52_RS21605 1246260 .. 1246294 - -15.8  -4.53419   TATGAGAAGAAGAAA    TCGAGGCGGA-GCCG AACTGG CGGCGCCCGCCTCGA     TGACGTGGTCGTTCG 100 67
CL52_RS05570 1230994 .. 1231030 - -10.2  -2.74563   GCCAGAGGCCAATGA  CGAGCGCCGG-G-CGGC ATGCCA GCCGACACCGGCGC-CG   CGCCCTGCACGGTCA  60 38
CL52_RS05550 1226504 .. 1226515 -  -2.2  -2.78384   GGCGCGTCTATCACA                GC-CG TGT CGAGC                GCTTGGTGGCGGCGC  39 108
CL52_RS05545 1225420 .. 1225435 -  -4.6  -3.66876   GACAAAAGCAAAAAG              CTGGCC ACAA GGTCAG               GAAATCCCGGAGCAG  55 193
CL52_RS05540 NONE
CL52_RS05535 1222684 .. 1222709 - -12.5  -3.06261   TGCGAAGCGGTAACA         GCGGTCGCGTGC AGG GC-CGCGCCCGC         AGATTCGTGTTCAGG  71 36
CL52_RS05530 1221648 .. 1221674 -  -2.1  -4.56597   GGGTCTCCTGAAAAA         GGCTCGGTCAG GCAGT CTGGCCCAGCA         CCGCGGCTTTGGCGA  68 52
CL52_RS05525 1220600 .. 1220615 - -10.4  -3.53012   GGTGCCCCGCTTAAA              GGGCCA CGGA TGGCCC               TGTGAACCGACTCCC  68 359
CL52_RS05520 1217469 .. 1217488 -  -4.3  -4.87786   CCAACCGGACAAAAA            TCGCTGGC GCGCG GCCAG-GA            ATGGCGACTGCCCCG  77 489
CL52_RS05515 1216176 .. 1216186 -  -8.2  -3.07113   GATGACTCCAGGGAA                 CGGC GCC GCCG                 GTCTTCTCGTACCGG  57 139
CL52_RS05510 1215094 .. 1215109 -  -6.2  -5.06414   CGTGGTCAAGAAAAA              TTGACT CAAA AGTCAA               TGTGGCGGACGAGCG  85 101
        xdhA NONE
        xdhB 1211095 .. 1211105 -  -2.4  -4.09685   TCGTAGGGCGGAAAA                 CCGC GAA GCGT                 TTTCCACCGGAACAT  57 89
        xdhC 1210194 .. 1210211 -  -3.4  -3.14931   GCCATTCGCGAGCAA             GCTCGCT CCTAC AGCG-GC             GTCGCGGTTCAACCT  44 34
        guaD 1208602 .. 1208612 -  -8.2  -4.13767   CCCCCGAGTGGAAAA                 CCGC GTT GCGG                 GTTTTCCACCCTACA  76 191
CL52_RS05480 1205775 .. 1205797 - -18.4  -5.04601   CTGACAAATGAAAAA           GCCCCGCCGC AAT GCGACGGGGC           GGCGATGCGCGCCTC 100 43
CL52_RS05475 1204911 .. 1204933 - -13.4  -3.07816   GCCGGAGTGAGGGAA           GTCTGGGCGC GCA GCGACCAGAC           CCGGATGTCGGGGTC  75 216
        puuE NONE
        uraD NONE
         alc NONE
CL52_RS05450 NONE
CL52_RS05445 1199054 .. 1199068 -  -4.2  -3.06261   GGTGAATTTGTAACA               GCCG ACGAACG CGGC               GGGGGGCGGGGTGCT  45 79
CL52_RS05440 NONE
CL52_RS05435 1194511 .. 1194524 -  -2.3  -2.66316   TGCTGGACTATAGCA               GGCTG TATT CAGCT                ATGCGAACAATTGAA  38 62
CL52_RS05430 1193273 .. 1193292 - -12.8  -5.37345   TTCAACCACAAAAAA            GGGCGACC CGCG GGCCGCCC             TTTTCGGTGTTGCCG 100 46
CL52_RS05420 1189541 .. 1189563 - -12.6  -3.71848   CGGGTCGAGGAAGAA           CTGCGCCCGC TGC GCGAGCGCGG           CCTGCGCCTGGCGGT  77 317
CL52_RS05395 NONE
        uraH 1184293 .. 1184347 -  -3.5  -2.71364   CGACTGGGTCAAGCA GGGCCTGGGCATCGG-CTGGCGCTC GACCTGG GAGATCCAGACCGA-GCTCAAGCGC GGCGAGCTGGTCACG  41 187
         gcl 1181581 .. 1181592 -  -7.2  -2.57931   CGTAGGGTGGATAAC                GCCG CTTG CGGC                 TTACCCACCGTGTCG  51 48
         hyi NONE
CL52_RS05370 1179446 .. 1179495 -  -7.2  -3.68351   CGCTGAGGACTGAAA TCGACCGCGCCCGGCATTCGAGCCG TGA CATCTCC--TGCCGGGCA-GGTCGA GGTGCCACCCGGAGG  65 228
CL52_RS05365 1177929 .. 1177946 -  -3.3  -3.61178   CGGATCCAGCCGAAA             CGCTCGGC GTG GTCG-GCG             TGCTCGCCATGGCTG  51 174
CL52_RS05355 1176458 .. 1176470 - -10.5  -4.04295   GCAAGTACAAGGAAA                CCGCC CGC GGCGG                GCTGGCGGTGAAGGG  78 203
CL52_RS05350 1175546 .. 1175569 -    -3  -3.05596   CACGCCTGTATTCAA          GCCGAAGGAC TCGG ATCACCCGGC           AATCGACGGACGGGC  43 17
CL52_RS05345 1174762 .. 1174774 -  -4.8  -2.52464   TTGGGCGTTAACCGA                GAGG GGCTG CCTC                ATGCCCAGGAACTCT  43 89
CL52_RS05340 NONE
CL52_RS05335 1173117 .. 1173133 -    -3  -2.69473   CGAAATCAGGACAAC              GCAATT TTACC AATCGC              AGGGGGCCGAGGTTT  40 63
CL52_RS05330 1171718 .. 1171752 - -11.5  -3.05993   CGATGGATAGAGAGA    CTTGCAGGGCCGGGAA GTGT TTCCCGGCC-TACATG     GAGTCAGAGCAAGCA  66 321
CL52_RS05325 1171464 .. 1171503 -   -21  -3.86194   AAGTGCGGCCATAAA  TAAACATGGGGCAGGAGT CGAT ACTCATGCCCCATGTTTA   TCAACAGGTGTTACT 100 36
CL52_RS20575 NONE
        pncB 1169520 .. 1169535 - -10.4  -3.61398   GGCGCGGCGCAACAA              CAGCGC GCTG GCGCTG               GCGTTCATCGATCTG  67 422
CL52_RS05305 1166584 .. 1166631 -    -5  -3.05384   CCGGCGTTCATCGAA CGGCACCT-GGC-AGGA---CGGCC CTC GGCCGAAGCCCTGGCCAAGGCGCCG GCCATCGTCTTCGGG  45 351
CL52_RS05295 1165270 .. 1165314 - -15.7  -3.61103   CAACTGTATGGGAAA CCAGCTGCAATCGGCAGCGCC GAT AGCGATGCCGACTGCACCCAG CGTGGACCTCGGCCA  86 65
CL52_RS05290 1164376 .. 1164398 -  -9.9  -4.98531   TTCTTAAACGAAAAA           TGCCCGTTC TGACG AAACGGGCA           TTTTTCGGACGCTGG 100 64
CL52_RS05285 1161696 .. 1161722 -  -7.3  -3.12668   TATCGCTATACCGAA        GAGCGCCTGCAC GCCG GTG-AGCCGCTC         TACGCCATCGGCGAG  52 420
CL52_RS05270 1159038 .. 1159059 -  -3.7  -2.71001   GATGGCGAAACGAAG           GCTTAATCT TAGC AGGCTAAGC            GAGCTTGAATAAGAG  42 108
CL52_RS05265 NONE
CL52_RS05260 1156426 .. 1156458 -  -3.9  -3.05816   GCAGGGCCGAGCCAA      GGCCGAGCAGGGTGC GGC GCTTCATGCTCAGTC      TCCGTCGTGGGCGTT  45 20
CL52_RS05255 NONE
CL52_RS05250 1153275 .. 1153291 - -10.8  -3.78934   CTCGCTCCAGAAGAA              CCCCGC CTCGT GCGGGG              TTTTTCTTTTTGTGG  76 389
CL52_RS05220 1148733 .. 1148761 -  -3.7  -4.15106   CATGAAGGCCGAAAA        GGACATCATCAGC GGT GCCGACAGTGACC        TGGACGAGACCCGCT  61 143
CL52_RS05210 NONE
CL52_RS05205 1145546 .. 1145564 - -11.7  -5.52384   GTCGGATTAAAAAAA             GCCCGCA TCGAG TGCGGGC             TTTTTTTCAGCTGCG 100 32
CL52_RS05190 NONE
CL52_RS05185 NONE
CL52_RS05180 NONE
CL52_RS05175 NONE
CL52_RS05170 1138186 .. 1138212 - -11.6  -2.58544   GTCGAGTCGGAGAAG         GACCACCTGGTG CCG CACCAGACGATC         ATGAACTACCGGGCC  61 235
CL52_RS05130 1128146 .. 1128170 -  -8.5  -2.62184   CCTTTGGCCAGAGCA          GTGGCCCGC ATGAGGG GCGGGCAAC          GTTCGCGCCGACAGA  53 41
CL52_RS05125 NONE
CL52_RS05120 NONE
CL52_RS05115 1126806 .. 1126824 -  -3.7  -3.95022   CGGATCAATACGAAA             CTCGGCG TGGCG CGCCGTA             CCCAGGCAGTTGCCA  59 132
         upp NONE
CL52_RS05085 1117239 .. 1117271 -  -8.3  -3.73775   GGGAGGGCGACGAAA      CCTCCGCCAACCACA GCC TGTCGCTGGCGCCGG      TATTCGTTTACGAAT  65 337
CL52_RS05050 NONE
        lolB NONE
        ispE 1108783 .. 1108801 -    -3  -3.41878   CCCTGTAACGTACAA             CCGGATGC TAG GCATCCCC             TTCCTGCTCCAATTT  49 14
CL52_RS05035 NONE
CL52_RS05030 1108534 .. 1108562 - -12.6   -5.1356   TCCGATGAATAAAAA        GCTGTTCAAAAG GCGAG CTCTTGAACAGC        TTCGGGAATATGGCA 100 36
CL52_RS05025 1107511 .. 1107528 - -14.1  -4.56597   GCTGTTGGGCAAAAA             GCCCCGC GGAT GCGGGGC              ACATACATCGGTGCG 100 50
CL52_RS05020 NONE
         pth NONE
        ychF 1105002 .. 1105033 - -18.2  -3.68619   TGCAACCCATGGAAA      CGA-AGAACCCCGGA TTT TCCGGGGTTCTGTCG      CTGCTTCAGGGCTTC 100 81
CL52_RS05005 NONE
CL52_RS20570 1102851 .. 1102864 -  -6.7  -2.50816   TTTCCACCCAGGAAG               CAGCA ATTT TGCTG                AGCGAAAACTCTCAT  47 87
CL52_RS04945 1086533 .. 1086551 -  -2.4  -3.52204   CGACGGCGAAACCAA            GCC-CTG CATCAT CAGCGGC             CCATCGACCACTTAC  48 104
CL52_RS04915 1083745 .. 1083778 - -16.9  -2.62184   GCTCCTTTCAGACGA     CATCGTAACGTTACG ATAA CGTAGCGTTACGATG      TTACGGTGCAGCCTC  83 26
        cadR 1077649 .. 1077664 -  -4.6  -3.54459   GGAATCGCCTGTAAA              CCCCAC TGGG ACGGGG               ATTCAGCGAAATGGA  55 381
CL52_RS04860 1073402 .. 1073412 -  -8.2   -4.0896   AAATGCGGTGGAAAA                 GGCC TCT GGCC                 GTTTTCCACCCTACG  73 43
CL52_RS04855 NONE
CL52_RS04850 NONE
CL52_RS04845 1068776 .. 1068786 -  -6.8  -4.09685   GGTCATGGTGGAAAA                 TCGC TGC GCGA                 GTTTTCCACCCTACG  67 103
CL52_RS04840 1067776 .. 1067793 -  -4.1  -3.28912   GTATAGGGACAGGAA             CATGACT GGCG AGTCCTG              CCGCTAGGCGCTGGC  48 29
CL52_RS04835 NONE
CL52_RS04830 1065910 .. 1065941 - -21.8  -3.02947   TAGCCACCATATATA      GAAAGGGGGTTAGC GAAA GCTAACCCCCTTTC       TCTTTTGCTCAACTG 100 116
CL52_RS04820 NONE
CL52_RS04815 1062185 .. 1062206 - -10.1  -4.39748   CACCATACAAAACAA           GGGGTTAGC GAAA GCTAGCCCC            TTTTTTGTTTGTGCC  95 57
CL52_RS04785 1057437 .. 1057459 - -11.2  -2.82834   CACCCTACGACCAGA           CCCCACCCGA CGT TCGGGCGCGG           CAAGCGGCTCGGTCA  64 38
        mksB 1050037 .. 1050056 -  -3.5  -4.09685   GCGTAGGGTGGAAAA            CGGCGAA GCCTTT TCCACCG             GACGATCCCTCCGGC  58 53
        mksE NONE
        mksF 1046347 .. 1046362 - -11.8  -4.28548   ACGCACGCATGAAAA              GGGCCC CTCG GGGCCC               TTTTTCGTTGCGGTA  91 43
CL52_RS04670 1029640 .. 1029655 -  -6.8  -2.90496   GCCTCTGGGAAATGA              TCGCGC AGGC ACGCGA               ACGGCAGGGCGATGC  50 393
CL52_RS04650 1024869 .. 1024900 - -14.4  -2.78596   GATGTCGCCAGTATA      GGCCGCGT-CGACGG GCT CTGCCGGACGCGGCC      GTTGGCTCAGAGCCC  75 32
CL52_RS04645 NONE
CL52_RS04640 1023712 .. 1023722 -  -2.4  -2.90571   AATGGGCGAACGATA                 GGCG TGG CGCG                 GGGGGGAGTAAACGG  40 61
CL52_RS04635 1022702 .. 1022721 -   -15  -5.47218   CGTCAGGCAAAAAAA            GACCCGGC GGGT GCCGGGTC             AAAAACCGTGATTAG 100 165
CL52_RS04625 1021292 .. 1021311 -  -4.2  -3.14468   CGGCATCATACCCAA            GCTCGTCCA GCA TGG-CGCGC            GGTCAGTCGTCATCC  47 28
CL52_RS04620 1019459 .. 1019511 -    -2  -3.54424   GGCGATCGGCGGAAA TGGCCGCACGA-TATCTGGAATTCGC CGC GCAAATCACAGCTGGTCG-GCGGCGA TATCCAGCTTCGTGG  49 6
        aroQ NONE
        accB NONE
        accC 1016951 .. 1016976 - -16.9  -3.08032   GGGTTGCGAAAACGA         CAGAGGCCGCC CGAA GGCAGCCTCTG          TTTGCAGCGCCGGGC  88 48
        prmA 1015936 .. 1015956 -  -2.6  -3.15027   ATTCCGCAGGAAAAT           GCC-G-GCTA GTC TAGCGCAGGC           GATGGCTGATCCGGC  43 51
CL52_RS04595 1014570 .. 1014590 -  -3.1   -5.0538   CGGGACTGCAAAAAA            GGGTGGGCA TAA TACCCGCTC            CGGATGACGGGTTAA  78 118
        dusB NONE
         fis 1013106 .. 1013124 -    -3  -3.28712   TTTGGTCGGTCATAA             CGGTTCCA GAA TGGGACTG             CAGGCTACGGGCGAC  46 88
        purH 1011466 .. 1011493 -    -4  -3.61517   AGTCGTCCGCAACAA        CCCGGGCGC-CTG CTT CAGCGCGGCCATG        CCACCTTAGTGACGG  53 31
        purD 1009977 .. 1009997 -  -2.3  -3.55444   CCCGTATTTGCGAAA            GGCGCCCGC TCA GCGGTCGGA            CCGCTCACGCGCAAT  49 14
CL52_RS04570 1006907 .. 1006920 -  -8.1  -3.30124   GGGGACCTGGCACAA               GGGCA TCGC TGCCC                GGGTGAGCGGCCGGC  56 192
CL52_RS04560 NONE
CL52_RS04555 1003731 .. 1003743 - -10.5  -3.49475   GTGAGTTCGAGAGAA                CGCCG GCA CGGCG                TTCGCTGTCCATCGG  68 167
        dksA  999031 ..  999052 - -12.9  -4.18908   ACAGGGGGAAAAGAA           GCGGGGCGC CTAA GCGCCCCGT            CGGGATCAGGAACCG  89 31
      gluQRS  998066 ..  998091 -  -7.5  -3.28791   AGCTGCCGGCTAGAA         GCGCGCTGCCTC TGC GAAGC-GCGTGC         GATCAGCGCAGCTGG  58 28
CL52_RS21025 NONE
CL52_RS04515 NONE
CL52_RS04510  993362 ..  993389 - -15.6   -5.5074   CAAGGCAATAAAAAA        CCGGGTTCTTCG TTAC CGATGAACCCGG         TTCCCTGTTACTCGT 100 62
CL52_RS04505 NONE
        folK  990910 ..  990920 -  -3.2  -2.88579   GCAATGCGTTACAGA                 TCGG TCG CCAA                 GCGTTCCAGTCCGGT  42 8
        panB NONE
        panC NONE
CL52_RS04485  988577 ..  988603 - -18.8   -4.8048   GGTCGATACGAAAAA         GCCCGAAGCACA GAC TGCGCTTCGGGC         TTTCGGGCATCGCCG 100 48
         pgi NONE
CL52_RS04475 NONE
CL52_RS04470 NONE
CL52_RS04465 NONE
CL52_RS04460  982255 ..  982272 -  -9.8   -3.6502   TAGCCTGTACTGAAA             CCCCGC GCCATG GCGGGG              TTTTTTATTGGCCCC  70 30
CL52_RS04375 NONE
        recN  953815 ..  953834 - -12.1  -3.63627   GGTCGATACCTGAAA            CCCCGCC CATAGT GGCGGGG             TTTTTCATTTATGGC  75 68
CL52_RS04320  952757 ..  952774 - -14.1   -4.7878   TAGGGAGAAAAGAAA             GCCCGGC GATA GCCGGGC              TTTGTTCATTCGGTT 100 31
CL52_RS04280 NONE
CL52_RS04275 NONE
CL52_RS04270 NONE
CL52_RS04265  942262 ..  942278 -  -4.4  -3.21099   GGCGTCGAGCACGAA             TGC-CGG ACCA CCGTGCA              CTGGCAGCTGTTCGA  47 262
CL52_RS04245 NONE
CL52_RS04240  937704 ..  937744 -  -7.3  -3.53012   GCCCCTGGCGGCAAA  GACGCCGTTCCTGCTCCAG CGT CTGGCGCTGGAGCGCAGCC  TCAATCAGGTTTTCG  58 432
        ytfE NONE
CL52_RS04205  932402 ..  932414 -  -4.7  -2.66316   TCGCTGACGATAGCA                CTGCG CGA CGCGG                TCTTTCGAGTTTGAC  43 46
CL52_RS04200  931673 ..  931687 -    -5  -2.60423   ACGGGAATCAAGTCA               CTCGAA CTG TTCAAG               GCGCTGTCGGTCGAG  43 8
CL52_RS04195  931378 ..  931395 - -14.1  -4.39998   GACGCAGACAAGAAA             GGCCGCC CTTG GGCGGCC              TTTCTTGCATCTGAA 100 42
CL52_RS04185 NONE
CL52_RS04180  927496 ..  927514 - -13.1  -3.61398   CCGCCGGTTGAAGAA             CGCCCCG CTTGC CGGGGCG             TTTTCATGTCCGGGC  77 29
CL52_RS04170 NONE
CL52_RS04165  923947 ..  923957 -  -2.4  -4.65895   CGGCTTAGGCAAAAA                 CAGC TCA GCAG                 GGGCGCCCCTGGTAA  68 19
CL52_RS04160  923424 ..  923462 -  -2.2  -3.90586   AGACCACCTCAGAAA   TGCGCAGCCCCGTGAGTC GCT GATCCACGAAGCGGCCTA   TTTCGTTACATATAA  54 61
         cra  913681 ..  913694 -  -8.1  -3.34233   GCAGAACCTGTAGAA               GCGAG CTTG CTCGC                GAACGCCGCCAGGCC  60 100
CL52_RS04130 NONE
CL52_RS04125 NONE
CL52_RS04120  911828 ..  911852 -  -2.7  -2.64416   CAGCGGTATCAGAAC          GAGGTGGCGCA GCA TGAGCGATCTC          CGACGATAGCGGCCA  38 73
CL52_RS04115  911248 ..  911261 -  -4.5  -3.05384   GCCGCTGCCAGCCAA               GGCTA CCGG CAGCC                GGCAGGGCCTCGCGC  45 49
CL52_RS04110  910378 ..  910390 -  -5.5  -3.33151   CGTGGTAAAGGAACA                CTCGC CGC GCAAG                CTGTACGAGATTCGC  51 376
CL52_RS04100  909258 ..  909292 -  -4.7  -2.78596   CAGCCGGCTACTATA     CGGCCGCCGGCGCCG CGATT CAGCCCTGCCGGCCC     CGTCTCAGTGGATCA  44 30
CL52_RS04095 NONE
CL52_RS04090  906934 ..  906944 -  -8.2  -3.13403   GCGTCTGGACGAAGA                 GCCG GTG CGGC                 GCGCCGTGCTGCAGG  56 471
CL52_RS20535  896952 ..  896965 -  -8.1  -3.53761   GAACTGCGTTTGAAA               GCGCT CTAG AGCGC                TTCGCATTCGTCGAC  63 17
        rpsT  889051 ..  889065 -  -8.5  -5.14965   ATGGGCATGAAAAAA               CCGGC ACTAG GCCGG               TTTTTTCGGAGCATC  93 47
CL52_RS03985  884128 ..  884138 -  -2.4  -3.60971   ATTGCAAGTGCGAAA                 TGCC CCC GGCC                 ATCGGTGTGCCGGTG  49 61
CL52_RS03980  883426 ..  883441 -  -7.5  -3.29144   CGAGGCCCGGCAGAA              GGCCG AGGCAG CGGCC               GAAGAAGGGCGCGCC  56 416
CL52_RS03950  877937 ..  877959 -  -5.5  -3.47227   GCTCAAGGAGCAGAA          CGGCCG-GCA GGGC TGAACGGCCG           TCGACGGACGGCGCC  55 76
CL52_RS03940  877009 ..  877028 - -16.4  -4.05788   CGTGCGGAAACGAAA            GGGCCCGC CTAA GCGGGCCC             CGGAAGTGCACGGCG 100 43
        radA  874789 ..  874805 -    -8  -3.51329   CAGGGTGAACGAGAA              TGGACG GTGCG CGTCCA              CGACCTGTCGCTCAA  60 295
        ettA  870900 ..  870922 - -15.6  -4.26903   GCTATTGCAGCAAAA           CGCCATCACC TGC GGCGATGGCG           TTCGAACAAGGGAAG 100 64
        siaA NONE
        siaB NONE
        siaC NONE
        siaD  866840 ..  866855 -  -5.4   -5.1675   GCATGCACCAAAAAA              TGACAC TGCT GCGTCA               CTGGTGGAGGACGCC  86 227
        gdhA  865299 ..  865337 - -18.9  -4.07687   ATGGCGTGCTCAAAA  CGAC-AGAGCCCCGCCGG GTGA CCGGCGGGGCTCTTGCCT   TATCGCTAGCGGCTT 100 51
CL52_RS03875 NONE
CL52_RS03870  862739 ..  862770 -  -2.3  -4.33274   GGTAGATGACGAAAA     GCCTGCGCCCTGGAG TGAA CTCCAGGTCA-AG-C      GTCGGTGGGGTGGCG  62 20
CL52_RS03865 NONE
CL52_RS03860  860594 ..  860604 -  -4.6  -3.14132   GTGCGGGTGGATGAA                 GCGC TGG GCAC                 GGTGAAGGTCAGCCG  47 432
CL52_RS03830 NONE
CL52_RS03825 NONE
CL52_RS03820  850372 ..  850418 -  -4.4  -4.11216   GCGCCAGTGGCAAAA GC-CGCGGATATTACACCGCCA GCCGG TAGCGGTGCAGCG-CCGCGAGC GTCGCAGCCGATCAG  63 37
CL52_RS03815  848812 ..  848836 -  -7.2  -3.85698   CGTTCGCGTGACAAA         GGTGGATG-GA AAAA CCTCATCCACC          AGCGCAACAGCAAGG  68 184
        trmA  847619 ..  847649 -  -9.7  -3.10164   CGACCGATTATGGAA      GTGCGCCGCC--GCC AGG GGCAAGGCGGCGCAT      GGCTCAGCGGCGGAC  60 29
CL52_RS03805  846069 ..  846105 -  -4.3  -3.43676   GCCATGAAGGTAGAA   CAGCCGGC-CCGATCC TGCCGC GGTTCAGCGCCCGCCG    ATGCCGTGCAGCTGG  51 13
CL52_RS03800  845557 ..  845600 -  -3.9  -2.72324   GCCAGTGAAACGAAG GGTGC-G-CGCG-AAGGCGA TGATCGG TCGCCCGGCGCGGCGGCACC GGGCGCCAGGCGCGG  42 41
CL52_RS03795 NONE
CL52_RS03790 NONE
CL52_RS03785  840407 ..  840439 - -13.3  -3.09933   CTCGAAGCCATGGAA      GCGGTCGGCCTGCAA CCG CCGCAGGCCTGCCGC      TCCGGCGTATGCGGC  72 346
CL52_RS03775 NONE
CL52_RS03770  837949 ..  837974 -  -4.5   -2.5507   CCATGGAATGAACAG         GGCGCACAGGC CATC GCCTCAGCGCG          GGATCTTCACGTGGT  41 18
CL52_RS03765  837342 ..  837357 - -10.4  -3.38162   AGTGAAGAAAGTGAA              TCGCCC CGCA GGGCGA               AACGAAGGGTGCAGC  66 136
CL52_RS03730 NONE
CL52_RS03725  827754 ..  827780 - -15.9  -5.58454   TCCAGACGAAAAAAA        GGCGCAGGG-GC AACT GCACCCTGCGCC         TTTGTCGTTTCCGGC 100 47
CL52_RS03710  825674 ..  825690 -  -5.2  -3.53012   GTCTGCGGCGGCAAA              CTTAAG GCAGT CTTAAG              CGGCGAGCGCTGTTC  53 82
CL52_RS03705 NONE
CL52_RS03700  823485 ..  823504 -  -2.8  -4.21631   AACTGATCGAAGAAA            TCCATGAG AGAC CTCACTGA             AGGGAAGGCATAAGG  61 19
CL52_RS03695 NONE
CL52_RS03690 NONE
CL52_RS03685 NONE
CL52_RS03680 NONE
CL52_RS03675 NONE
CL52_RS03670  818446 ..  818475 - -19.3   -4.4078   TGGCCTGAACGAAAA       GACGCCCGGTGAC TGCG GTCGCCGGGCGTC        TTCGTCAGTTGCTGA 100 48
CL52_RS03615 NONE
        narL  801998 ..  802023 - -11.1  -3.97368   CCCGGAAGCGATAAA         CCGGCTACCTC CAAA GAGGCAGCTGG          TGCTCAACCGCGCAT  82 29
CL52_RS03605  801248 ..  801258 -  -2.4  -3.14132   GGTGCGTCCGATCAA                 CCCG CTT CGCG                 CTGATAGGCCGCGAG  43 11
CL52_RS03595  800090 ..  800121 -  -2.8  -2.80816   CTGTCAGCCATCAGA      CCGG-CGGGACAGCG CAT CGTTGCCGTGGCCGG      TCAGTGCCCAGGATA  40 26
CL52_RS03590  798708 ..  798738 -  -3.9  -3.01712   CTGGCTGCTCGAACA      CGAGCGCG-AGC TGGCCTAC GCGGCGCGCCCG       GCCCCCGGTGCGCTG  44 483
CL52_RS03575  796488 ..  796513 -  -4.6   -3.2614   GATGCGCGAGATCAA         GGCCGCGCTCG CCGAT CAGGCGC-GCC         GCGAAGCTCAGCGCG  49 91
         ada NONE
CL52_RS03560 NONE
CL52_RS03555  792962 ..  792975 -  -4.5  -3.62046   GCAGCCTGGCAAGAA               GGACC CAGC AGTCC                ACCGAGGAAATCGAG  52 396
CL52_RS03545  789999 ..  790014 -  -3.2  -2.70932   TTCTGCGGCGAATCA              CCGC TTTCCTGG GCGG               TGTCGCCCCGTTTTT  40 86
CL52_RS03525  786169 ..  786215 -  -7.8  -3.29947   CATCGAGCAGATGAA CGTCGCCAAGGACGATATGGCG CGG CGCTTCATCAACCTGGTCGACG AGTTCTACGACCGCA  56 278
CL52_RS03505  782087 ..  782104 -  -5.6  -4.45544   TCTGATCAAGGAAAA             CCACAT CGCTGC ATGTGG              CGGTATCGCATCGGC  74 382
CL52_RS03495 NONE
CL52_RS03490 NONE
CL52_RS03485  777235 ..  777261 - -13.1  -3.34468   TCGGAAGCAAAGAGA        GCTGGAAGTGCC GAAA GGC-CTTCCAGC         TTTTTTTATGCCTGC  74 91
CL52_RS03450  771165 ..  771205 -  -3.9  -3.65351   GCAGGCCCATTGAAA CGTCCTCGAGCGTGGCTG CGCGGT CAGCCGCGATCGA-ATCG  GCGGATCAGGCGCCT  53 60
CL52_RS03445 NONE
CL52_RS03440 NONE
CL52_RS03435  767492 ..  767517 -  -5.3  -3.25823   GCGGCTGGACACCAA         CGTCGCGCC GGAACAGG AGCGCGCCG          GGGTGGTACCGCAGG  51 408
CL52_RS03425  765021 ..  765033 -  -2.6  -3.28712   GCGGTGGCCTCAGAA                CCGC TCCAC ACGG                TTGCGTCCCTCGCGC  45 7
CL52_RS03420  762777 ..  762800 -  -9.5  -2.80816   TGCTTACCCAGCACA          CCGGGCTGC CGCCGC GCAGCCAGG           ACGGCAATCCCTGGG  56 154
CL52_RS03410  758581 ..  758597 -  -3.6    -3.737   GAATTGCTGACGAAA              GTCACC GGTCG GGTGCC              GCGCCGTTACGTCGG  54 32
CL52_RS03360  747700 ..  747711 -  -3.6  -3.09516   GTTGCGATGATTGAA                GCCA TCGC CGGC                 TTGTCGTTTATCGCC  43 102
CL52_RS03355  747565 ..  747580 - -10.4  -5.37593   GCTGAAACGAAAAAA              CCGAGC CAGG GCTCGG               TTTTTTCTTCAAGAG 100 41
        queG  733317 ..  733358 -  -2.8  -3.30124   CTGGATGCCGGACAA CTGCGTGCG-TTGAGCGCCG AGCT CGGCGCGCAGTCGC-CGTCG TCGGACTAGCCTGCC  46 31
CL52_RS03270  726973 ..  726987 -  -4.9  -4.04206   GGATGTCGACAGAAA               CGCAC CTTTT GCGCG               CCCTCAGCACCACGG  63 101
         eat NONE
CL52_RS03260  723900 ..  723933 -  -7.5  -4.58283   GAACGCGTGGAAAAA     CGCGTGGAAAA-GACC TGC GGTCGTTTTCCACCCT     ACGGGCCGCGGCGAG  83 108
        eutC  722883 ..  722916 -  -8.7  -2.57132   GTGGTGTTCCAGAAG     GCCGCGCCGGTGGCCA AGC TCGCCGCGGGCG-GGC     TTTCAGTTCTTCGGC  53 152
CL52_RS03245  721744 ..  721756 - -10.5  -2.78384   GTGGGCGCGATTATA                GGCGC ATT GCGCC                GGGCAATGCACGCCG  60 58
         ppa  721116 ..  721132 - -10.8   -5.4833   GCAGGCAATAAAAAA              GCCGGC TTGTG GCCGGC              TTTTACGGGGTGGCG 100 46
CL52_RS03235 NONE
         prs NONE
        pncA  717877 ..  717900 -  -6.6  -3.16288   CAAATTGCAGGAATA          CGCCGGACGGC CGT GCCG-CAAGCG          CTCCGAAGGCAAGGC  51 369
CL52_RS03215  715228 ..  715240 -  -6.2  -3.14344   GATCGCTGCGACCAA                GGCG GCGAT CGCC                GAAGGCATCGTGCCG  51 430
CL52_RS03205 NONE
CL52_RS03200 NONE
CL52_RS03195 NONE
CL52_RS03190 NONE
CL52_RS03185 NONE
CL52_RS03180  705305 ..  705315 -  -8.2   -4.2602   GACATTAACAAAGAA                 GCGC CCG GCGC                 AGCTACCGGTTCAGC  79 36
CL52_RS03175 NONE
CL52_RS03170  704017 ..  704027 -  -8.2   -3.7941   GATGCGCGATAAGAA                 CGGC CGG GCCG                 TCGGGCCGTACTGCG  69 125
         dxs  701980 ..  702035 -  -3.8  -3.04517   AGGTTGGTGGAAAAT GCTTCGCAGTTTTCCACCCTACGGCCG CGT CAGACGTAGGGTGGATGAC-GCTCCAC CCATCCACCGAACCG  45 44
CL52_RS03155  700657 ..  700667 -  -3.2  -3.50853   GGTGGGGAAGCACAA                 GCCT AGC AAGC                 CCCTGGCCGATTGCC  49 52
CL52_RS03150  699991 ..  700001 -  -2.4  -3.62046   CGACCTGCGCAAGAA                 CGTC CTG GTCG                 GCGATGGCTCCACCG  48 253
CL52_RS03140  698134 ..  698159 -  -6.1  -2.87132   GGGGGCGTTCACAGA         GAAATGGGGAC GTGC GTCACCCTTTC          AAGGGGCGCTGAAGA  48 352
CL52_RS03135 NONE
CL52_RS03130  695477 ..  695520 -  -8.3  -2.52464   TGTCTGCGGAACGGA TG-TTACACAGGT-ACCCCCG AAAT CTGGGGCGACCTGTGCAATCA GGTCGAGCGCTGTGC  53 41
CL52_RS21305  693897 ..  693908 -  -4.4  -2.89564   GCTGGAGGTTAGAGA                TTGC TTCG GCAA                 TTGCCTTGGTCTGAG  44 390
        phnC NONE
        phnD NONE
        phnE NONE
        ptxD NONE
CL52_RS03095  686283 ..  686295 -  -3.3  -3.51202   GATCAAAGCAATCAA                GCCCT TCC ACGGC                ACCACCCGATCCATC  49 225
CL52_RS03065  681711 ..  681728 -  -2.7  -3.39908   GTCTCGCAAAACACA             TTTGCCA TTAC TCGCAAA              GATCGAGGCTTGTCG  48 384
CL52_RS21020 NONE
CL52_RS21015 NONE
CL52_RS20510 NONE
CL52_RS21010 NONE
CL52_RS20395  667352 ..  667365 -  -3.8  -3.05384   CGCTTCGGCAGTGAA               GCGA GTTGTA TCGC                AACATTCAAAGGTGG  45 31
CL52_RS02995 NONE
CL52_RS02985 NONE
CL52_RS02980 NONE
CL52_RS02975  656389 ..  656415 -  -2.3  -3.77087   CATGGAACATGTAAA        CG-ACGTTGTGA GTGT TCACCACGTACA         CGTATGGGAAATCGC  54 451
CL52_RS20505  654896 ..  654911 - -11.8  -5.38047   GATGGACACAAAAAA              GCGCCC CGAA GGGCGC               TTAGAGTACAACTGC 100 95
CL52_RS02950  646252 ..  646269 - -14.1  -5.40004   CACCAAACGAAAAAA             GGCGCCC TGAT GGGCGCC              TGAAACACATCTTCA 100 88
CL52_RS02945 NONE
CL52_RS02940  643482 ..  643492 -  -3.2  -2.92091   ATAGGGATTGATACA                 CAGA CGA TCCG                 CTTCTATGAGCAGCA  41 500
CL52_RS02930  641503 ..  641519 -  -3.8  -4.09864   ATTGAGCGCTGAAAA              CTAATT GAGTG AATTAG              CATGAAAGCTCCTGG  61 348
CL52_RS02900  634710 ..  634720 -  -3.2  -4.19678   CCACAGCTGAAGAAA                 TCCA GCT CGGA                 GAACTGAGGTTCGGC  61 123
CL52_RS02885  633211 ..  633241 -  -3.2  -4.84359   TGACGCCCACAAAAA       CTATAAGCCCTGCC AAA AACAGGACCTCCAG       GCCAGCCACTGGGGA  75 112
CL52_RS02880 NONE
CL52_RS02870 NONE
CL52_RS02865  630464 ..  630519 -  -6.1  -3.28712   CTTCGCGCCGGAGAA CTACCTGTTCGGCGATGCCACGCGCAA CCTC TCGC-CGCCGCAGCGCC-AGCAGGTCG AAGCGCGACTGCGCC  53 98
         crp  628239 ..  628280 - -23.1  -3.53012   GGCCTTCGTCTGAAA CGAAAAGGCCGGAGTCGCG TCGC CGCGGCTCCGGCCTTTTCC  TGCTCGGGCGCGCTC 100 39
CL52_RS02815  621146 ..  621202 - -10.7  -2.66733   CGGCAAGCGAGACGA TCTCG-GCCTGCGTACGCCG-CTGCGC CGGCT GCGCGGGCGGCGTGAGCAGGCACGGGC CCTGCTCGAGGCCTG  59 414
CL52_RS02795 NONE
CL52_RS02790  614891 ..  614920 - -18.7   -4.8622   TTCGGCAAGCAAAAA       CGGGGTGA-GGCAC CTG GTGCCATCACCCCG       TCTGTTTCAGGCCTG 100 46
        pdxA  613820 ..  613843 -  -2.5  -3.71794   AGCGAACGATGCAAA         GGCGCGAAGCT TAAC AG-TT-GCGCC          CGTGCGCGACACGCA  52 53
        rsmA NONE
        apaG NONE
CL52_RS02770 NONE
        glpE  611359 ..  611389 -   -11   -2.6162   GAAGCCGGCAAACAG       GGTGCAGCCCGCGC GGC GCGGGGCCTGCACG       GGGACACAAAAACTT  62 39
CL52_RS02760  609105 ..  609117 -  -3.3  -2.63715   ACGTAGCTCATACGA                GCCCT CCG AGGGA                CGCTGCAGGCCTTGA  39 117
CL52_RS02755 NONE
CL52_RS02750  606167 ..  606184 - -11.3  -3.14795   AAATCTGCATGAACA             CCTCCGT TGGC ACGGAGG              ATAAGGCATAGCGCC  67 114
CL52_RS02745  604500 ..  604513 -  -6.7  -3.57971   ACAGCGAGCGCGAAA               GGCAT CTGC ATGCC                GGACTCGACGCGCTG  58 522
        plsY  602973 ..  603005 - -12.6  -2.71712   CGGCGGGCCGGAAAT     CG-CCCGGCTGGCCG AGCA CGGCGTGCCGGGGCG      TTTCGTGTTTCCGCG  65 480
        rpsU  601967 ..  601984 - -14.1  -3.85909   GCATGCAAACGCAAA             GCCCGGC CAGG GCCGGGC              TTTAGGCGACGTCAG  86 51
        dnaG NONE
        rpoD  597988 ..  598003 - -11.8  -5.60993   GCGGGCATAAAAAAA              CCCCGG CGAA CCGGGG               TTTGGCAGTCACTCG 100 34
CL52_RS02705  597749 ..  597765 -  -6.5  -4.82901   TGGTTTCCAGAAAAA              GCCTTGG AAA CCAAGGG              TTTGGTGGGCCTTCC  83 28
CL52_RS20320 NONE
CL52_RS02670  590832 ..  590853 -  -2.1  -2.73542   CCTAATCTTTAATCA           GGCGGTTCCG CGA CGGGT-CGCC           TTGGTTACTCAAAGG  39 92
CL52_RS02665  590397 ..  590409 -  -4.7  -2.75064   CGGGCCATGCAATCA                CCAGC GGG GCAGG                AAGACGGCGGCGGTC  44 10
CL52_RS02660  589916 ..  589929 -  -2.3  -2.72344   TGGCACTCCGAACGA               CGATC AATT GTTCG                ACTCAGCAAGCGCCT  39 15
CL52_RS02655  589476 ..  589514 - -11.1  -4.37886   GCACCGCCCAGAAAA  CAGCAAAGGCCCAAGTCCC TGA GGGAC-CGGGCCTTTTC-G  CTTGAGATAATCTAA  89 48
CL52_RS02640  586019 ..  586037 -  -4.5  -3.01712   CCTCGCCTGCGAATA             TCAAGCC GGGTG GGCTAGA             GGAGGTCAGCCCTTG  45 31
        trxC  585469 ..  585482 -  -5.2  -3.15999   CGCTGACAGATCCAA               GCGC TCTTCG GCGC                GGGCGCAGCCTAGCA  48 72
CL52_RS02630  584995 ..  585008 -  -3.7  -3.05844   TTCCGCAGCCGAAGA               GCCCG GCTG CGGGA                GAGGGCCTAGTTGTA  45 32
CL52_RS02625  584368 ..  584403 -  -5.5  -2.81072   CGGATCGAACACAAT   CCCGAC-GCAGCGGCATG GCT CA-GCC-CCGCTGTCGGA   TTCGACAGCGGGCTG  46 252
CL52_RS02555  563877 ..  563896 - -10.7  -5.42259   CGAGCGCTAAAAAAA            CGCCCTG CTTAGT CAGGGCG             TTTTCTTTGGTGTCG 100 123
CL52_RS02525  557744 ..  557756 -  -3.4  -3.17146   CGGCCTCAGAACAGA                TCGA TCGGG TCGA                CGTCCACCGACCAGC  44 3
        argS NONE
CL52_RS02515  555197 ..  555226 - -22.3  -3.53811   CTGATTGCCGCCAAA       GCAAAACGCCGGG TCCG CCCGGCGTTTTGC        ATTTTGCTCTCAGCG 100 35
         ppx  549013 ..  549032 - -16.4  -4.05788   TGCGCGCAAACGAAA            CGCCCGGC TTCG GCCGGGCG             TTCTCGTTAGCGCAG 100 48
        elbB  544699 ..  544711 -  -6.2  -2.66316   CGCTGCATCAGAGTA                GGCG TTCGG CGCC                AGAGGCGGGGCAGCT  46 108
CL52_RS02470  544160 ..  544189 -  -3.3  -3.66178   CGCGGCAAGTGGAAA       GGGCCGCCGCTTC GCCT GTATCGGCCGCTC        AGCCGCAGAGATAAG  51 24
CL52_RS21415 NONE
CL52_RS02465  541779 ..  541792 -  -3.7  -3.61398   TCGGCTGGTGAAGAA               GGGCG TCGC CGCGC                TCGACCCGCGCGGGC  51 188
CL52_RS02435  536988 ..  537017 -  -5.5  -4.59773   GGCTACGGCGAAAAA       GCCCAGCGCGCGA AAGC CCGCACGTCCGGC        CAGCAAGGCCCCTGA  77 62
        argH NONE
CL52_RS02380  525633 ..  525647 -    -7  -3.57561   GGTCAACTCCGGAAA               GGCGCG GAA CGAGCC               CCACGGCAGCCCCGG  59 376
CL52_RS20465 NONE
CL52_RS20315 NONE
CL52_RS02365 NONE
CL52_RS02360  521039 ..  521066 - -13.4  -3.18274   CGGAGTGGAAGGCAA        GCAAGCCGCCGC TGCA GCGACGGTTTGC         TCCGCTCCGGGGCTG  76 42
CL52_RS21295  520491 ..  520504 -  -3.7  -3.02144   CCACTCCTGGGAAGA               TGGGC CTCG GCCCG                GTCCGCTGAGTGTAG  45 72
CL52_RS02350  519970 ..  520009 -  -5.6  -3.84825   GTGATTGACATGAAA  CAGCAG-GGGCAACAGGCG GAA CACCTGCTGCTGGCGGCTG  GACAGGCCGAGCAGG  62 244
CL52_RS02330 NONE
        lysA NONE
        dapF NONE
CL52_RS02315  513194 ..  513223 - -17.1  -2.62184   GGTGGTGCCAGATGA       GCCGGAGTCGCTG GGGC CAGCGGCCCCGGC        GAACGGTCAGCGTAC  83 32
        xerC NONE
CL52_RS02305  511518 ..  511548 -   -22  -4.04206   TGAGCCGCACAGAAA       CGAAAGAGCCCGCA TCG CGCGGGCTCTTTCG       TTTCAGTCATTCGCC 100 32
CL52_RS02275 NONE
CL52_RS02270 NONE
        betT  503148 ..  503201 -  -7.3  -4.07568   CTTTCTCGCGGAAAA GGCCCGCGCGCCTGCCCAGTCGGGGC AGTGA GGCCCGGCTGCGC-GGC-CG-GGCCC CGGCCTGCTCAGCGG  70 34
         rep  499230 ..  499241 -  -2.2  -3.50133   GACCGCGAGAAAAAG                CGAGC CCG GC-CG                TCAGCGCTTGAGCAT  47 26
CL52_RS02250  498219 ..  498276 -    -9  -3.14132   CTGCCGCCGGAGCAA CTGGAACGGGTGCTGCCACGCCTGCCGC TGCA GCGGATGGCGCG-CAACACCCTCACC-G ACCTCAGCGCGCTGC  59 285
CL52_RS02220  492363 ..  492399 - -15.3  -3.73775   TGCAGCGCCATGAAA   CGGCACGAGGCGACGCG TTTTT CGCGTCGCCTCGT--CG   AATGGCGCCAACACT  90 110
CL52_RS02215  491417 ..  491438 -  -2.1  -3.14931   TCGACGGCGCACGAA           GTGCTGGGCG TCG CGCGCGGC-C           GTGCTCGGCTGAAGC  42 310
CL52_RS02185  487498 ..  487519 -  -7.9  -3.55071   GCAGATCGGCCGAAA           CGGCTGGCGC ATG GCGCC-GCAG           GCGGCCGGTCGCTCA  62 38
CL52_RS02180  486117 ..  486130 -  -4.5  -2.68356   AGCGAAATTCAGAAG               CGGTC CTTG AACCG                ATACCAGAGCATGCC  41 5
CL52_RS02175  484450 ..  484464 -  -5.7  -2.69406   GCAGAGACTAGACCA               CCACT GGCGA AGTGG               TATCACCCCAAAGAA  46 67
CL52_RS02170  483130 ..  483146 -  -7.2  -3.02144   TCACCTCGCCCAATA              CGCGGC CTATC ACCGCG              ACCCGCGCAACCTGC  51 514
CL52_RS02150  477727 ..  477739 -  -9.1  -3.53091   AGGCGGTGCTGGAAA                TGGCG CGT CGCCA                CCTGGCCGAGCGCAT  64 452
       coaBC NONE
         dut  475470 ..  475481 -  -7.2  -2.69964   GGCCGAACCAGAGCA                CCGC GGCG GCGG                 CGAGCAGGCCGGCTA  52 208
        algC NONE
        argB  472077 ..  472095 -   -16  -4.72272   GGCCGGCATGAAAAA             GGGGAGCC TGT GGCTCCCC             TTTTTTCGTCTCGGC 100 50
CL52_RS02105  468302 ..  468320 - -17.4  -2.87132   CGCGCGTGGTAGAGA             CCGCGCGC CAT GCGCGCGG             TCTGCATCAGAGGCT  87 32
CL52_RS02090 NONE
         gmk  465472 ..  465495 -  -2.3   -4.1466   AGGGAAGCGGCAAAA          GCGGGC-CGA GGCTG CCGTGCCCGG          TCAGGCTAACAGCTG  59 26
        rpoZ NONE
        spoT  462888 ..  462932 -  -3.5  -3.81741   AAGCGACAAGGCAAA GCGGAGTCAGGGTGGATGT GAAAGCG ACATCCACCCTAGGTTCGT CGGCCGATACGGTTA  54 38
CL52_RS02070 NONE
CL52_RS02065 NONE
CL52_RS02060  459432 ..  459443 -  -2.2  -3.30635   GAAAGCCGGGGACAA                GGAT TCTA ACCC                 GGTATTGTGTGGAAA  45 69
CL52_RS02055  458497 ..  458512 -  -6.1  -3.57144   CGCTTGAGCCTGAAA              CAGCC GGGCGA GGCTG               CCTGGTATTCCAACG  56 494
CL52_RS02040  455087 ..  455099 -  -4.7  -4.62471   CGTAAGGTGGAAAAA                CGCGC GCA GCGCT                TTTCCACGTAATGGG  74 472
CL52_RS02015  450744 ..  450771 - -16.4  -3.01791   ACTGCTCGGCGAACA        CAGCGAGGCGCTG TTG CAGCGCCT-GCTG        GGCATGAATGACGAG  79 78
CL52_RS02000  447165 ..  447188 -  -2.2  -4.07687   ACCTGTGGTGGAAAA          CGCTGCGCGG TTTT CCACCCTACG           GCTGGCCATCCCCTC  57 47
        glcC  434539 ..  434553 -  -4.2  -3.47227   TTTCAAGCAGTACAA               CGACCA CTA TGGCCA               TGTGCGTGGCGACGA  49 449
CL52_RS01935  433263 ..  433295 - -11.2  -2.94962   AGATGACGAATCAGA     CG-CGGCAGCGCGGC TCAC GGCGCGATGCCGGCG      GCTTGCCAGAGTTCG  64 7
        ubiA  432259 ..  432271 -  -4.1  -3.54475   CCCGGCATTAGATAA                CGCAA TTG TTGCA                GCGATGTGACAGCCT  53 94
        phoB NONE
        phoR  430056 ..  430066 -  -4.6  -3.54741   CATGAGCTCGGGAAA                 GGCC GTT GACC                 CGCGTGAGGATGGGG  55 100
CL52_RS01915  428628 ..  428666 -  -3.7  -3.02511   CCCAGCCGGTCAACA  GCCTGCCGAACTTCGCCG TGGG CGGCG-AGTGACGCAGCC   CCCCCTTCACTATCG  45 62
CL52_RS01900  425758 ..  425792 -  -5.1  -3.48924   CGATGCGCGACACAA    GCTGAGTCGC-CAGTTC GTC GAACTGCACGACTT-GC    TCGACGCCTAGCGGG  53 33
CL52_RS01890 NONE
CL52_RS01885 NONE
CL52_RS01880 NONE
CL52_RS01875 NONE
CL52_RS01870  420013 ..  420045 - -14.1  -3.26471   CCATCCGCACATCAA     GGCGCCGGTCGCGG TCTGAC CCGCGGC-GGCGCC      TGGCCTAATCCTCCT  77 30
CL52_RS01850  416407 ..  416425 -  -4.4  -3.21695   GCACGAGGAAGGCAA             GCCGGTGA GCA TCTGCGGC             GAGATGGCCGGCGAT  49 281
CL52_RS01835  412918 ..  412928 -  -6.8  -3.34517   ACGCTTGGCGAAACA                 CCTG CGT CAGG                 CCGTTTGCTGGGAAT  54 129
        rpiA  410163 ..  410179 -  -2.1  -2.57344   GAGCGCCCTCACAAG              CGTAGCC GCC GGTTCCG              TCGGGTGCCGCCCCG  38 44
CL52_RS01815  409435 ..  409450 - -10.4  -2.53876   TTCCAGCGCAAGGCA              GCCGTG CCGG CACGGC               CCTGATCCGCGCCGG  59 343
        serA  404818 ..  404835 - -12.7  -4.72272   GGCGGGCATGAAAAA             GGGAGGC CTGG GCCTCCC              TTCTTGCCTCACCGC 100 48
CL52_RS01780  401854 ..  401903 - -12.1  -4.68593   CCGAGGATGGAAAAA CGCGCAAATGCGAGGCTTAAGCCG TAC CGGCTCAGGCCTCGCACG-ACTCG GTCCAGTCGAGCCGG 100 7
CL52_RS01775 NONE
CL52_RS01770  400840 ..  400891 -  -2.9  -3.19192   CTGCATCGAACTCAA GGGCATGGCG-CTCGGCCGGCGCCTG AGC CAGA-GCCAGCCGCGGCACC-TGTCG CGGGTCTAGCGGCTC  44 39
CL52_RS01720 NONE
CL52_RS01715 NONE
CL52_RS01710  389522 ..  389549 -  -9.8  -4.07885   CAGCGCGGCGGAAAA        CCCCACGCTGAC CATC GTCAGCCTGGCG         ATCCGCCAGGCCGAG  78 101
CL52_RS01695  386771 ..  386798 -  -2.6  -3.05596   CATCGGGCTAGGCAA        GGCGGCCCATTCT AGA AGCACGC-CCGCC        GGCCACGGGTAGCAC  41 60
        gloA  385718 ..  385734 - -11.5  -2.73364   GCGCTACTTCAACGA              GCGCGGC CTG GCCACGC              TGCTGTTCGACCTGC  62 505
CL52_RS01650  373316 ..  373356 - -18.3  -2.71144   CATCTGCGCGAACTA  CCCTTCCAGGATAGTGGCA CGT CGCCACCTTCCTGGCAGGG  ACCGCCGTCATCAAT  86 73
        glnA  367968 ..  367999 - -20.2  -3.85698   CGGGTGGCCCATAAA      CGACGAACCCCGCC GGGT GGCGGGGTTCGTGG       GCGCGGTCGAGGCCG 100 66
CL52_RS01630 NONE
CL52_RS01625  366569 ..  366585 - -11.5  -3.65261   CAAGAAGCAAACCAA              CGCGCCA TAG CGGCGCG              AAATGGCGGTTCCCT  73 127
        glnL NONE
        ntrC NONE
CL52_RS01605  362989 ..  363007 -  -4.4  -3.60792   TGGTCAAGGGGGAAA             TCTCCACG CAG CGGGGCGA             TGAATGCCCGAATGC  53 76
        hslV  362373 ..  362383 -  -2.4  -3.39142   TGGACAGTGAATGAA                 CGGG CAG CTCG                 AAAACCTGGGCGAGG  45 86
        hslU  360968 ..  360992 -  -5.5  -3.06831   GGAATGCGCATGCAA          CGCTCCGGAAG GAT CGGCCGCAGCG          GTTAGAGGATGTAGC  49 27
CL52_RS01590  360452 ..  360471 -    -7  -2.59564   CGCGCACTGGACAAG            GCACTGGC CTGA GCCGGCGC             ATCGCGCTTGTGCTC  48 143
        ubiE NONE
CL52_RS01575 NONE
        ubiB NONE
        hisI NONE
CL52_RS01560 NONE
        tatA  355954 ..  355968 -    -5  -3.05046   GCAGTTCGGTAAAAC               CGATAT CGA ACATCG               CGGCGCGCCTGTGTC  47 39
        tatB NONE
        tatC NONE
CL52_RS01540 NONE
CL52_RS01535  353465 ..  353495 -  -5.3  -2.62184   GGCGCGCGCACAGCA      CGCACCG-ACCGCC TGCG GGCGCTTCGGCGCC       GATATGCAGGTCTTC  44 60
CL52_RS01520  351149 ..  351168 -  -2.8  -3.14344   GAGCCGGCTCAGGAA            CCCTACACC GCG GGTG-AGGT            GGACCTGGCCCGTTA  44 485
CL52_RS01490  345896 ..  345909 -  -3.1  -2.74563   GGCAGACGCCAAGCA               TGACC GCTG AGTCA                CGTTTTTGCCAGTTC  40 92
CL52_RS01485  345344 ..  345364 -  -3.2  -3.53012   TTTCCTCCGGGCAAA           GCGCCCAGC ATAG GCCAGGC-C            GTCATCCGGCGGGCG  49 55
CL52_RS01480  344676 ..  344697 -  -2.3  -3.08679   TCGGCGGAGTGAACA           TCCT-GACGC TGT ACATCCAGGA           GCGTTTCGGCGTGCG  42 193
CL52_RS01465  341698 ..  341717 -   -15  -4.06055   AGGCCTGAAACGAAA            GGGCGGTC GAAT GACCGCCC             TTTTGCTTTGCCTGG  93 54
CL52_RS01455 NONE
CL52_RS01450  338236 ..  338249 -  -3.7  -2.58544   TTCTATGCGCAGAAT               CTCGC CCTG GCGCG                GAGCAGTGCGACCCG  40 240
CL52_RS01440  336134 ..  336170 -  -6.5  -4.08945   ACGAGGCCTCGAAAA   TCGCCCGCCGCGC-CA TCCAGT TGTGCGAGGAAGGCGA    GTCGCCGCGCGGCTA  66 396
CL52_RS01410  328970 ..  328986 -  -5.7  -3.62046   GCAGGCGGGCAAGAA              CCGCATC GAC GTCGCGG              TTGCGCCGGCCGCCG  57 48
CL52_RS01400 NONE
CL52_RS01375  315918 ..  315934 -  -8.7  -2.71712   GCGGCGGCTCTAAAG              GTTGACC ACT GGCCAAC              GGGGCCCGTTCACCG  54 73
CL52_RS01370  314164 ..  314176 - -10.5  -3.53811   TGGACGCCGGTCAAA                CCGGG CGC CCCGG                CAGATGGCGCTCGGC  70 8
CL52_RS01355  308101 ..  308144 - -20.4  -5.79595   CCTGAAAACAAAAAA GGCGCCAGTCGTGGGTGCTCC AGA GGAGCAAC-ACGAATGGCGCC TTAGCTTTCAGGTCC 100 165
CL52_RS21285  307804 ..  307829 -  -3.1   -3.0792   GAATACGCGAGGCAA         TGGGCGCGC ATCAGCCG GCGCGCCTC          GTTGTTATGGTCGAT  43 54
CL52_RS01350  305888 ..  305899 -  -3.6  -4.08692   CAACCTGCTGGAAAA                CGCG CTGG CGCA                 TACCGGCGAGGGCGG  61 301
CL52_RS01335 NONE
CL52_RS01330  301576 ..  301589 -  -3.1  -3.01791   ACGCCGCGGCGAAGA               CACGT ACGT ACATG                ACGGGATACCTCAGG  43 103
CL52_RS01325 NONE
CL52_RS01320 NONE
CL52_RS01315  298589 ..  298610 - -11.5  -5.60993   GCTGCCACAAAAAAA           GAGCCCGCC GGGC GGCGGGCTA            AAGCGTGGCTCGTTG 100 23
        algB NONE
CL52_RS01285 NONE
CL52_RS01280  291782 ..  291799 -  -4.1  -4.24342   TGCTCGACGAAGAAA             CGCGCAAC GTG GTCGC-CG             CTTTCCAGATGAAAT  65 121
        yihA  285622 ..  285650 -  -3.8  -3.88232   GCCGGCAGACAACAA       CCCGCTGGTGCGCG CCC CGCACACC--CTGG       CCGACGTGATCGGCG  57 357
CL52_RS01200 NONE
CL52_RS01195 NONE
        ssrS NONE
CL52_RS01190  272197 ..  272213 -  -2.3  -3.60151   TCGTCGAAACCAGAA              CGAAA AAAACCG TTTCG              ACGTGGACGATTCGC  49 209
CL52_RS01185  271368 ..  271380 -  -6.2  -3.47494   ATTGAAGTACTACAA                GGCC GACGT GGCC                CTGCGCATCACTGGC  55 246
CL52_RS01175  269698 ..  269725 -  -9.2  -3.37245   GGATTTGAATACCAA        GCAGAAACCGCT GGAA AGCGATTTCTTC         GAAGTGGTGCTGACC  63 358
        gpmI  267079 ..  267129 - -11.8  -4.60487   TAGTATGCCTAAAAA CAT-GGCCGGAAGCTTGGCGGCG ATCGCG CCCCGTCTGGCTTCCGGCCGATG GCGTCAGTCGTTGAG 100 29
CL52_RS01150 NONE
CL52_RS01145  264422 ..  264447 - -10.4  -3.06183   CCGAGCGCCAGCCAA         CCGCGGGC CACGTTCACT GCCCGCGG          GTGAGGTTCAGGCCC  62 13
CL52_RS01140  263642 ..  263656 -  -2.8  -2.74144   GCGGCACCTCGAAAT               CAGC GGATTGT GCTG               GCCGACCGATACCGG  40 10
CL52_RS01135 NONE
CL52_RS01130  262103 ..  262134 - -17.4  -2.82635   AGGTCGACGACCAGA      CCG-TCCAGCGCCTG CAA CAGGCGCTGGATCAG      ATGCGTGCCGATGGC  82 111
CL52_RS01095 NONE
CL52_RS01090 NONE
        mutY NONE
CL52_RS01080  253911 ..  253952 - -12.1  -2.52623   CCGCTGCGATAAGAC GGGCTTCGCTGCGCCGGTC ACTC GCTCGGCGGAACGTAGCCC  TCGGCCTTGGCGTAC  65 1
CL52_RS01075  253669 ..  253683 -  -8.5  -5.62045   ATAGACAACAAAAAA               CCCGC ACGGG GCGGG               CTTCTTGTGGGCTTT 100 74
CL52_RS01070 NONE
CL52_RS01065  251858 ..  251869 -  -2.2  -3.46647   CCCACTTACCAAATA                GATC GGCT GACC                 AGGCGGGTGGGAAGT  47 79
CL52_RS01060  251096 ..  251107 -  -7.2  -4.66537   CTGCGGAACAGAAAA                CCGC AATT GCGG                 CTCTGTTATTCGGTG  83 31
CL52_RS01055 NONE
CL52_RS01050  250329 ..  250350 -  -5.7  -5.49234   ACAGGCAACAAAAAA           GCGCCCATG TTGG CTTTGGCGC            TTGTGCGCCTTTCGT 100 134
CL52_RS21275 NONE
CL52_RS01045  249744 ..  249774 -  -5.3  -2.79796   GGTGACTCCAGCAGA      CGGCGCTCATTGGG CACC CCCTACG-GCGTCG       GCCTTCTCTTGCAGC  44 1
CL52_RS01040 NONE
CL52_RS01035 NONE
CL52_RS01030  246625 ..  246650 -  -4.7  -3.85698   GTGGGTGGGGACAAA         GGGGACAAA TTGCCCGG CCTGTCCCC          ACTGTCCCCTTGCCT  60 129
CL52_RS01025  245527 ..  245537 -  -2.4  -4.30014   CGTATGAAGCGAAAA                 GGCG GGG CGCG                 AATCACCCGTGACGG  62 100
CL52_RS01020  241876 ..  241888 -  -5.5  -4.07568   TGCTCCTGTTGAAAA                CCAGG CCT CCTGA                CCCTCCCCGCAGAGC  65 119
CL52_RS01015  241031 ..  241046 -  -2.4  -2.98823   GCCTCTTCAGATAGA              CGGTCG CAAG CGGCCA               ATGATTCAGCTTTTT  41 59
CL52_RS01010  238863 ..  238875 -  -2.6  -4.08767   GTCAGGCGGCGAAAA                GCGC CTATC ACGC                AGCTTGTACGCCAAC  57 85
CL52_RS01005 NONE
CL52_RS01000  237057 ..  237072 -    -6  -3.24021   CGCTCAAACACCGAA              GCCCGG CATT CCGGCC               CCGAGAGAGGTCTGC  51 107
CL52_RS00995  236346 ..  236359 -  -2.3  -2.53015   AGAGGTCCCAACTCA               TGTGG CGCT CCTCA                CGAAGCCGCGGCCGG  37 9
CL52_RS00990  235624 ..  235656 -  -6.2  -3.72695   AGCGCCGGCATGAAA     CGGTGCGCCCGGCTGC ACA GCAGCCG-GTGC-CGG     TCAGCGCCCCTGGCA  60 26
CL52_RS00985  234378 ..  234399 - -10.2  -3.86015   CAGGCGGCGCAGAAA           GTTGCGCA GCTGTT TGCGCAAC            AAATTGCGCAAGCCT  76 267
        tssA NONE
        tssB NONE
        tssC NONE
        tssE NONE
CL52_RS00960 NONE
CL52_RS00955  227721 ..  227734 -  -3.7  -3.24827   AAGAGAATTTACCAA               GAGCC ATAG GGCAC                TCCATGCTGCTCGAT  47 5
CL52_RS21390 NONE
        tssF NONE
        tssG NONE
        tssH NONE
CL52_RS00930  219504 ..  219530 -  -4.4  -3.25223   GACCCAGAGCAGCAA        CCGCCGGCACT TCTTCG AGTGC-GCCGG         ACGCGAGTTCGAGCA  49 501
CL52_RS00915 NONE
CL52_RS00910 NONE
CL52_RS00905 NONE
CL52_RS00900 NONE
CL52_RS00895  209350 ..  209364 -    -7  -2.87683   ATACCTCGCTATAGA               CCCGGC GGA GCCGGC               ACGTTCGCCTCAGCG  50 35
CL52_RS00890 NONE
CL52_RS00885 NONE
CL52_RS00880  204956 ..  204970 -  -5.6  -3.30243   ATCGATCCGTCAGAA               GGCATG GCG CAGGCC               GAGCTGCAGCCACTG  52 5
CL52_RS00875 NONE
CL52_RS00870  202366 ..  202376 -  -6.8  -3.15544   GGCGACCTGGATCAA                 GCTG TAG CAGC                 CGACACGGCGCTGGC  53 88
CL52_RS00860  199234 ..  199255 - -15.9  -3.33696   CGGCCCTTGAACGAA           GAACCCGCC AATC GGCGGGTTC            TTTCGTTTTGGCGGC  84 57
CL52_RS00845  197591 ..  197605 -    -7  -3.14132   GGCCGGGCGCAGCAA               GCGGCC GCT GGCCGA               GTACCGCGAGCTGCT  52 93
CL52_RS00835  196083 ..  196093 -  -8.2  -3.55071   CCAGATCGGTGGAAA                 CGCC TTC GGCG                 TTTGCCACCCGGCGC  65 49
CL52_RS00805 NONE
CL52_RS00795  186510 ..  186525 -  -4.7  -3.85817   ACCGTCTCGCAGAAA              GCTGA TTATCT TCAGC               TGTCGAAGTTACTTG  60 354
CL52_RS00735  163757 ..  163770 -  -3.7  -2.72049   GACAGCGGCGAACGA               CCGGC CCCT GACGG                GCAGCCGCAAGATGA  42 181
CL52_RS00730 NONE
CL52_RS00725  161206 ..  161221 -  -3.9  -3.14344   GATCCTGGCGAGCAA              GCCGC TGGCCG ACGGC               TCGCATGAGCTGCCC  45 89
CL52_RS00715 NONE
CL52_RS00710  158615 ..  158634 -   -10  -2.63073   CCTGCTGAACAAGAC            CGAGCTGA CCGC CCAGCTCG             CCGGCACGCTGCAGC  57 520
CL52_RS00685  154541 ..  154557 -  -9.3  -2.78384   CCGTGGCCCACTAGA              CCCGCCG CGC CGGCCGG              CTCAGCGCAGCAGCT  57 27
CL52_RS21220 NONE
CL52_RS00625  142896 ..  142946 -    -9  -2.94354   TGAGACAGCCAGAGA CCT-CACC-CGCGCCCCGCTCACAC AGGA GCA-GTGAGGGGCGCGAGGTGCAGG CGCGGGACTGTCGAC  58 147
CL52_RS00595 NONE
CL52_RS00590  130902 ..  130920 -  -8.8  -3.46602   GCGCTTACACGATAA             CGCAAGCC ACC GGCCTGCA             CGGACGCCCAGTCCC  63 405
CL52_RS00525  111481 ..  111532 -    -7  -3.17219   GACAAGGCCGAGGAA GCGGTGACCCGGGTGCTCAACGCCG AGG CAGCCCTGCGCGCCCTGGCC-CGGC AATTCCCCCACTGAG  53 91
CL52_RS00505 NONE
CL52_RS00500 NONE
CL52_RS00495  104552 ..  104592 -  -2.6  -3.40403   CGCCCGCCAGCAGAA GTTGC-CGCCGCCCTGACC GACGGA GATCAGGGCG-CGAGCG-C GCCGCCCAGCAGGGC  47 11
CL52_RS00490  103201 ..  103237 -  -8.5  -3.25823   CTCGCTCGATAGGAA    GACCCGGCCGACCCCCG CCA CGGGGATCGGTGCCGTC    AGGGTTTCAGGACCA  60 24
CL52_RS00485  102620 ..  102637 - -14.1  -5.28176   CCGAGCCACAAAAAA             GGGCGCC CGCA GGCGCCC              AATGCACGCATCCCC 100 47
CL52_RS00465 NONE
CL52_RS00460 NONE
CL52_RS00455   96968 ..   96984 -  -6.5  -3.02144   GCACCTGGCCGAACA              GGGCTGA GCA TCAGCGC              AGCTCGGCGAGGATC  51 19
CL52_RS00440   94477 ..   94493 -  -7.9  -3.33348   GGTAACAGCACAAGA              GACCGCG CCG CGGGGTC              AGGGTGCCGGCGCCG  58 24
        prlC NONE
CL52_RS00430   92057 ..   92085 -   -14  -4.37886   TCATCCCGCAGAAAA       CGAAAA-CCCGCC AAAT GGCGGGCTTTTCG        TTCAACCGAAACGCA 100 41
CL52_RS00420   88915 ..   88968 - -11.8  -3.28712   GCCTTCGGTGGATAA GCAGAGC-GTTATCCACCCTACG GTTACCGTG CGTAGGGTGGAAAACCGCGCAGC GTTTTCCACGCGTCT  72 247
CL52_RS00415   88113 ..   88125 -  -3.3  -2.94416   GACTCGGAGTATAGA                CAGCG ATC CGGTG                TAGGCAATTCAGGCG  42 34
        coxB NONE
        ctaD NONE
CL52_RS00400 NONE
CL52_RS00395 NONE
CL52_RS00385 NONE
CL52_RS00380   81929 ..   81951 -  -7.6  -3.65902   GGGACTTCAGCGAAA           CGCCTGAGTG CCA CGCTCAGCCG           ATCTGCGACGACTTG  62 19
CL52_RS00375 NONE
        cyoE NONE
CL52_RS00365   79174 ..   79211 -  -8.2  -3.87869   CGAACGCCGGACAAA   GCGGCGGAACGGGCCG GCCACT CGGGCCGGCCGGCCAC    CTTAGCAAAGTTCGC  71 65
CL52_RS00360   78157 ..   78179 -  -6.1  -2.57931   CGTAGGGTGGATAAC           GCCGCCAGG CTTAT CCACGCGGC           CTGGCACAGCAGTCG  46 43
CL52_RS00345   74542 ..   74555 -  -2.3  -3.01712   GGGTGCCGGCGAACA               GGTAG CGGC CTTCC                TCGTCGCGCACGTTG  41 133
CL52_RS00335   72759 ..   72786 -  -6.9  -4.08216   GCAGCTGCTGCAAAA        GCGCGAC-AGCG AAGGG CGCGAGCCGCGC        GAACTGGCGATCGCC  67 222
CL52_RS00325 NONE
CL52_RS00320 NONE
        galE   56235 ..   56247 -  -4.7  -3.69354   GCGGATAATGGCAAA                CGGCC AGG GGCTG                AGCGTGTCGGCGTGT  58 169
CL52_RS00265 NONE
CL52_RS00260   53037 ..   53080 - -10.8  -2.87132   GGTTTCGTCGAGACA CGGGCGCAGCTGGCGCTGTGG GTG CCGCGACGCCGGCT-CGACCG GCGTGCCGAACGCCT  61 82
        trpB NONE
        trpA   49965 ..   49992 - -14.8  -4.91873   TACAGGAATGAAAAA        GCCGCTGCCCTC TCAC GGGAGCAGCGGC         TTTTCGGTTACGGCA 100 49
        yghU   46353 ..   46376 -  -3.6  -3.61398   CGTTGTGCTGAACAA          CCGGGTCCTG AGCG CTGGTCGCGG           CGTGGCGCCTGGCGA  51 192
CL52_RS00215   45475 ..   45507 -  -7.5  -4.13767   GGCGGTAGGCGAAAA      GGCCCCCGCGCCGGG CCA CCAGAAGCAAAGGCC      GAGTGGTGGACAAGG  72 74
CL52_RS00200   41385 ..   41427 -  -6.9  -2.70932   CCTTTTCGCCAAGCA GGTGACAGGTGAGTAGCGCA TCGG CGCCCTACTCGCCCG-CGCC CGGCACCTTCACCCC  49 11
CL52_RS00190   38795 ..   38806 -  -7.2  -3.90112   GCGGTGCGAATGAAA                CGCC AGTC GGCG                 TCGTTTATCCAGAGC  68 391
         pgm   36893 ..   36934 -   -10  -3.53091   ATCCTCCTTGGGAAA GCCGGGC-GCCGCGACTGC GAGCG GCTGTTGCAGCGGGCCGGC GGCCCGGTGCGCTTG  68 157
CL52_RS00175   36374 ..   36429 - -14.6  -3.14344   CAGGCGGCGCAGTAA GCGTTACATCGGCAGTGCTCGCCGCC GTGT GGCCGCGAGCACTGCCAACGCTTGAC GAGTGGGGATAGGCT  80 140
CL52_RS00165 NONE
CL52_RS00160   33742 ..   33785 - -11.1  -2.52623   GTTGGGCGACAACAC CGACGGCATCGGCCTGGTCAA CGAC CTGACC--GCCAATGCCGGCG TCGAACTCCAGGGCC  59 517
CL52_RS00130   26982 ..   27010 -  -7.2  -3.54543   ATCGACCTCGGCAAA        CCCGGCCGGCCG GCCCG CGGCCCGCAGCG        CCTTGCGTGTGCGGC  58 161
         def   23628 ..   23645 - -11.3  -5.06816   ACTCGCTAAGAAAAA             GGCTTGC CGGA GCAAGCC              TTTCGGGGTTCGAGA 100 42
         fmt NONE
        rsmB   21320 ..   21330 -  -4.6  -3.04792   TGATGATCTTCAAGA                 CAGG ACT CCCG                 AAACGGCTTGTTCGC  47 9
        trkA   19747 ..   19772 -  -2.6  -5.26316   GGAGGGTACAAAAAA         GCGCTCCTTAT GTGAA ATCAGGAG-GC         CAATTGAGACGAATG  84 197
        ehuB   18669 ..   18701 -  -7.6  -2.95884   TGATGAAGCGAGAGA     TCGGGAGGGCGGGAC GCTG GCCCCGCC-TACCGT      TACTGGGCGCAGAGT  53 25
        ehuC NONE
        ehuD NONE
        ehuA   16399 ..   16417 -  -2.3   -4.1899   TTACTGTAGTGAAAA             GCGCCCG ATCGG CAAGCAC             TCATGCGCGAGGCGC  59 51
CL52_RS00070   15695 ..   15708 -  -6.7  -3.78953   ATGTGGACGATGAAA               CGCTT CAAG AAGCG                TCCGCCGGGTGAGAA  64 354
        glyQ NONE
        glyS NONE
        gmhB NONE
CL52_RS00035 NONE
CL52_RS00030    8363 ..    8387 -  -7.8  -5.14965   AGCGGCATGAAAAAA         GGGAGCGGACC GCAA GG-CTGCTCCC          TTTTTTGCCTGACCA  93 59
