locus-tag class description J4H94_RS00005 PF00308 Bacterial dnaA protein J4H94_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix J4H94_RS00005 PF11638 DnaA N-terminal domain J4H94_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain J4H94_RS00010 PF02767 DNA polymerase III beta subunit, central domain J4H94_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain J4H94_RS00015 PF02463 RecF/RecN/SMC N terminal domain J4H94_RS00020 PF01751 Toprim domain J4H94_RS00020 PF18053 DNA gyrase B subunit insert domain J4H94_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS00020 PF00204 DNA gyrase B J4H94_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus J4H94_RS00025 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4H94_RS00025 PF13192 Thioredoxin domain J4H94_RS00030 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS00045 PF05746 DALR anticodon binding domain J4H94_RS00045 PF02092 Glycyl-tRNA synthetase beta subunit J4H94_RS00050 PF02091 Glycyl-tRNA synthetase alpha subunit J4H94_RS00055 PF03352 Methyladenine glycosylase J4H94_RS00075 PF00005 ABC transporter J4H94_RS00080 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS00085 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS00090 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4H94_RS00095 PF02080 TrkA-C domain J4H94_RS00095 PF02254 TrkA-N domain J4H94_RS00100 PF01189 16S rRNA methyltransferase RsmB/F J4H94_RS00100 PF01029 NusB family J4H94_RS00105 PF02911 Formyl transferase, C-terminal domain J4H94_RS00105 PF00551 Formyl transferase J4H94_RS00110 PF01327 Polypeptide deformylase J4H94_RS00115 PF01476 LysM domain J4H94_RS00120 PF17782 DprA winged helix domain J4H94_RS00120 PF02481 DNA recombination-mediator protein A J4H94_RS00125 PF01300 Telomere recombination J4H94_RS00130 PF00107 Zinc-binding dehydrogenase J4H94_RS00130 PF08240 Alcohol dehydrogenase GroES-like domain J4H94_RS00135 PF01218 Coproporphyrinogen III oxidase J4H94_RS00140 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J4H94_RS00140 PF01488 Shikimate / quinate 5-dehydrogenase J4H94_RS00140 PF08501 Shikimate dehydrogenase substrate binding domain J4H94_RS00155 PF00768 D-alanyl-D-alanine carboxypeptidase J4H94_RS00170 PF03180 NLPA lipoprotein J4H94_RS00175 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS00180 PF09383 NIL domain J4H94_RS00180 PF00005 ABC transporter J4H94_RS00185 PF00199 Catalase J4H94_RS00185 PF18011 C-terminal domain found in long catalases J4H94_RS00185 PF06628 Catalase-related immune-responsive J4H94_RS00190 PF01863 Protein of unknown function DUF45 J4H94_RS00195 PF00950 ABC 3 transport family J4H94_RS00200 PF00005 ABC transporter J4H94_RS00205 PF01475 Ferric uptake regulator family J4H94_RS00210 PF01297 Zinc-uptake complex component A periplasmic J4H94_RS00215 PF00202 Aminotransferase class-III J4H94_RS00220 PF00171 Aldehyde dehydrogenase family J4H94_RS00230 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS00230 PF00072 Response regulator receiver domain J4H94_RS00235 PF00486 Transcriptional regulatory protein, C terminal J4H94_RS00235 PF00072 Response regulator receiver domain J4H94_RS00240 PF16736 Single Cache-like J4H94_RS00240 PF00989 PAS fold J4H94_RS00240 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS00240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS00245 PF00072 Response regulator receiver domain J4H94_RS00245 PF00486 Transcriptional regulatory protein, C terminal J4H94_RS00250 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS00250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS00250 PF00989 PAS fold J4H94_RS00260 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS00260 PF17158 Membrane-associated sensor, integral membrane domain J4H94_RS00270 PF04371 Porphyromonas-type peptidyl-arginine deiminase J4H94_RS00275 PF00795 Carbon-nitrogen hydrolase J4H94_RS00285 PF00120 Glutamine synthetase, catalytic domain J4H94_RS00290 PF07722 Peptidase C26 J4H94_RS00295 PF00120 Glutamine synthetase, catalytic domain J4H94_RS00300 PF00202 Aminotransferase class-III J4H94_RS00305 PF13416 Bacterial extracellular solute-binding protein J4H94_RS00310 PF13416 Bacterial extracellular solute-binding protein J4H94_RS00315 PF00005 ABC transporter J4H94_RS00315 PF08402 TOBE domain J4H94_RS00320 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS00325 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS00335 PF00561 alpha/beta hydrolase fold J4H94_RS00350 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4H94_RS00355 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J4H94_RS00360 PF03480 Bacterial extracellular solute-binding protein, family 7 J4H94_RS00365 PF00158 Sigma-54 interaction domain J4H94_RS00365 PF00072 Response regulator receiver domain J4H94_RS00365 PF02954 Bacterial regulatory protein, Fis family J4H94_RS00375 PF04321 RmlD substrate binding domain J4H94_RS00380 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J4H94_RS00385 PF00483 Nucleotidyl transferase J4H94_RS00390 PF16363 GDP-mannose 4,6 dehydratase J4H94_RS00395 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS00395 PF17151 Periplasmic sensor domain J4H94_RS00405 PF00005 ABC transporter J4H94_RS00410 PF13533 Biotin-lipoyl like J4H94_RS00425 PF00005 ABC transporter J4H94_RS00430 PF02405 Permease MlaE J4H94_RS00435 PF00199 Catalase J4H94_RS00455 PF00182 Chitinase class I J4H94_RS00460 PF04717 Type VI secretion system, phage-baseplate injector J4H94_RS00465 PF00069 Protein kinase domain J4H94_RS00475 PF14331 ImcF-related N-terminal domain J4H94_RS00475 PF06744 Type VI secretion protein IcmF C-terminal J4H94_RS00475 PF06761 Intracellular multiplication and human macrophage-killing J4H94_RS00485 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE J4H94_RS00510 PF02653 Branched-chain amino acid transport system / permease component J4H94_RS00515 PF02653 Branched-chain amino acid transport system / permease component J4H94_RS00520 PF00795 Carbon-nitrogen hydrolase J4H94_RS00525 PF00857 Isochorismatase family J4H94_RS00530 PF00005 ABC transporter J4H94_RS00535 PF00857 Isochorismatase family J4H94_RS00545 PF07729 FCD domain J4H94_RS00545 PF00392 Bacterial regulatory proteins, gntR family J4H94_RS00555 PF07683 Cobalamin synthesis protein cobW C-terminal domain J4H94_RS00555 PF02492 CobW/HypB/UreG, nucleotide-binding domain J4H94_RS00580 PF01522 Polysaccharide deacetylase J4H94_RS00585 PF01425 Amidase J4H94_RS00590 PF07729 FCD domain J4H94_RS00590 PF00392 Bacterial regulatory proteins, gntR family J4H94_RS00600 PF01292 Prokaryotic cytochrome b561 J4H94_RS00605 PF01322 Cytochrome C' J4H94_RS00610 PF00171 Aldehyde dehydrogenase family J4H94_RS00615 PF00486 Transcriptional regulatory protein, C terminal J4H94_RS00615 PF00072 Response regulator receiver domain J4H94_RS00620 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4H94_RS00620 PF00378 Enoyl-CoA hydratase/isomerase J4H94_RS00620 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4H94_RS00625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4H94_RS00625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4H94_RS00625 PF02770 Acyl-CoA dehydrogenase, middle domain J4H94_RS00630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4H94_RS00630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4H94_RS00630 PF02770 Acyl-CoA dehydrogenase, middle domain J4H94_RS00635 PF07690 Major Facilitator Superfamily J4H94_RS00650 PF09339 IclR helix-turn-helix domain J4H94_RS00655 PF00501 AMP-binding enzyme J4H94_RS00655 PF13193 AMP-binding enzyme C-terminal domain J4H94_RS00660 PF00830 Ribosomal L28 family J4H94_RS00665 PF00471 Ribosomal protein L33 J4H94_RS00680 PF11892 Domain of unknown function (DUF3412) J4H94_RS00680 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases J4H94_RS00680 PF03641 Possible lysine decarboxylase J4H94_RS00695 PF01066 CDP-alcohol phosphatidyltransferase J4H94_RS00700 PF01636 Phosphotransferase enzyme family J4H94_RS00710 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J4H94_RS00710 PF00476 DNA polymerase family A J4H94_RS00710 PF01612 3'-5' exonuclease J4H94_RS00710 PF01367 5'-3' exonuclease, C-terminal SAM fold J4H94_RS00715 PF05638 Type VI secretion system effector, Hcp J4H94_RS00720 PF04717 Type VI secretion system, phage-baseplate injector J4H94_RS00770 PF13593 SBF-like CPA transporter family (DUF4137) J4H94_RS00775 PF02525 Flavodoxin-like fold J4H94_RS00780 PF02233 NAD(P) transhydrogenase beta subunit J4H94_RS00785 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J4H94_RS00790 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J4H94_RS00790 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J4H94_RS00795 PF00437 Type II/IV secretion system protein J4H94_RS00800 PF00482 Type II secretion system (T2SS), protein F J4H94_RS00805 PF07963 Prokaryotic N-terminal methylation motif J4H94_RS00805 PF08334 Type II secretion system (T2SS), protein G J4H94_RS00810 PF12019 Type II transport protein GspH J4H94_RS00810 PF07963 Prokaryotic N-terminal methylation motif J4H94_RS00815 PF02501 Type II secretion system (T2SS), protein I J4H94_RS00815 PF07963 Prokaryotic N-terminal methylation motif J4H94_RS00820 PF07963 Prokaryotic N-terminal methylation motif J4H94_RS00820 PF11612 Type II secretion system (T2SS), protein J J4H94_RS00825 PF03934 Type II secretion system (T2SS), protein K J4H94_RS00830 PF12693 GspL periplasmic domain J4H94_RS00830 PF05134 Type II secretion system (T2SS), protein L J4H94_RS00845 PF00271 Helicase conserved C-terminal domain J4H94_RS00845 PF17191 RecG wedge domain J4H94_RS00845 PF00270 DEAD/DEAH box helicase J4H94_RS00850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS00850 PF03466 LysR substrate binding domain J4H94_RS00860 PF13823 Alcohol dehydrogenase GroES-associated J4H94_RS00860 PF08240 Alcohol dehydrogenase GroES-like domain J4H94_RS00860 PF00107 Zinc-binding dehydrogenase J4H94_RS00875 PF05175 Methyltransferase small domain J4H94_RS00900 PF01312 FlhB HrpN YscU SpaS Family J4H94_RS00905 PF01311 Bacterial export proteins, family 1 J4H94_RS00910 PF01313 Bacterial export proteins, family 3 J4H94_RS00935 PF10282 Lactonase, 7-bladed beta-propeller J4H94_RS00940 PF02770 Acyl-CoA dehydrogenase, middle domain J4H94_RS00940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4H94_RS00940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4H94_RS00945 PF00072 Response regulator receiver domain J4H94_RS00945 PF13426 PAS domain J4H94_RS00945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS00960 PF00593 TonB dependent receptor J4H94_RS00960 PF07715 TonB-dependent Receptor Plug Domain J4H94_RS00970 PF03795 YCII-related domain J4H94_RS00975 PF08281 Sigma-70, region 4 J4H94_RS00975 PF04542 Sigma-70 region 2 J4H94_RS00980 PF02954 Bacterial regulatory protein, Fis family J4H94_RS00980 PF00158 Sigma-54 interaction domain J4H94_RS00980 PF00072 Response regulator receiver domain J4H94_RS00985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS00985 PF02743 Cache domain J4H94_RS00985 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS00990 PF01966 HD domain J4H94_RS00990 PF11871 Domain of unknown function (DUF3391) J4H94_RS00995 PF01740 STAS domain J4H94_RS00995 PF00916 Sulfate permease family J4H94_RS01000 PF00582 Universal stress protein family J4H94_RS01015 PF01597 Glycine cleavage H-protein J4H94_RS01040 PF03144 Elongation factor Tu domain 2 J4H94_RS01040 PF09106 Elongation factor SelB, winged helix J4H94_RS01040 PF09107 Elongation factor SelB, winged helix J4H94_RS01040 PF00009 Elongation factor Tu GTP binding domain J4H94_RS01045 PF03841 L-seryl-tRNA selenium transferase J4H94_RS01045 PF12390 Selenocysteine synthase N terminal J4H94_RS01050 PF04216 Protein involved in formate dehydrogenase formation J4H94_RS01055 PF01292 Prokaryotic cytochrome b561 J4H94_RS01060 PF13247 4Fe-4S dicluster domain J4H94_RS01060 PF09163 Formate dehydrogenase N, transmembrane J4H94_RS01070 PF12852 Cupin J4H94_RS01070 PF12833 Helix-turn-helix domain J4H94_RS01075 PF02566 OsmC-like protein J4H94_RS01080 PF00561 alpha/beta hydrolase fold J4H94_RS01090 PF03480 Bacterial extracellular solute-binding protein, family 7 J4H94_RS01095 PF00580 UvrD/REP helicase N-terminal domain J4H94_RS01095 PF13361 UvrD-like helicase C-terminal domain J4H94_RS01100 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS01100 PF00563 EAL domain J4H94_RS01100 PF03707 Bacterial signalling protein N terminal repeat J4H94_RS01105 PF16325 Peptidase family U32 C-terminal domain J4H94_RS01105 PF01136 Peptidase family U32 J4H94_RS01110 PF04325 Protein of unknown function (DUF465) J4H94_RS01115 PF13840 ACT domain J4H94_RS01115 PF00696 Amino acid kinase family J4H94_RS01120 PF05721 Phytanoyl-CoA dioxygenase (PhyH) J4H94_RS01125 PF06339 Ectoine synthase J4H94_RS01130 PF00202 Aminotransferase class-III J4H94_RS01135 PF00583 Acetyltransferase (GNAT) family J4H94_RS01140 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J4H94_RS01140 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J4H94_RS01145 PF02685 Glucokinase J4H94_RS01145 PF01418 Helix-turn-helix domain, rpiR family J4H94_RS01145 PF01380 SIS domain J4H94_RS01155 PF03466 LysR substrate binding domain J4H94_RS01155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS01160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4H94_RS01160 PF00289 Biotin carboxylase, N-terminal domain J4H94_RS01160 PF02785 Biotin carboxylase C-terminal domain J4H94_RS01165 PF02436 Conserved carboxylase domain J4H94_RS01165 PF00682 HMGL-like J4H94_RS01165 PF00364 Biotin-requiring enzyme J4H94_RS01180 PF04960 Glutaminase J4H94_RS01185 PF00484 Carbonic anhydrase J4H94_RS01195 PF17763 Glutaminase/Asparaginase C-terminal domain J4H94_RS01195 PF00710 Asparaginase, N-terminal J4H94_RS01200 PF01235 Sodium:alanine symporter family J4H94_RS01210 PF00375 Sodium:dicarboxylate symporter family J4H94_RS01215 PF10415 Fumarase C C-terminus J4H94_RS01215 PF00206 Lyase J4H94_RS01220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS01220 PF03466 LysR substrate binding domain J4H94_RS01225 PF00501 AMP-binding enzyme J4H94_RS01225 PF13193 AMP-binding enzyme C-terminal domain J4H94_RS01230 PF01261 Xylose isomerase-like TIM barrel J4H94_RS01230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4H94_RS01235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS01235 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS01240 PF00731 AIR carboxylase J4H94_RS01245 PF02222 ATP-grasp domain J4H94_RS01245 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J4H94_RS01265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4H94_RS01265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4H94_RS01270 PF12857 TOBE-like domain J4H94_RS01270 PF00005 ABC transporter J4H94_RS01275 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS01280 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS01290 PF10055 Uncharacterized small protein (DUF2292) J4H94_RS01300 PF10417 C-terminal domain of 1-Cys peroxiredoxin J4H94_RS01300 PF00578 AhpC/TSA family J4H94_RS01320 PF04471 Restriction endonuclease J4H94_RS01320 PF14338 Mrr N-terminal domain J4H94_RS01335 PF02384 N-6 DNA Methylase J4H94_RS01350 PF04851 Type III restriction enzyme, res subunit J4H94_RS01350 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) J4H94_RS01350 PF08463 EcoEI R protein C-terminal J4H94_RS01350 PF00271 Helicase conserved C-terminal domain J4H94_RS01365 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4H94_RS01375 PF03480 Bacterial extracellular solute-binding protein, family 7 J4H94_RS01380 PF02566 OsmC-like protein J4H94_RS01390 PF00072 Response regulator receiver domain J4H94_RS01390 PF08448 PAS fold J4H94_RS01390 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS01390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS01390 PF13188 PAS domain J4H94_RS01395 PF03734 L,D-transpeptidase catalytic domain J4H94_RS01395 PF01471 Putative peptidoglycan binding domain J4H94_RS01405 PF00437 Type II/IV secretion system protein J4H94_RS01405 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J4H94_RS01415 PF01865 Protein of unknown function DUF47 J4H94_RS01420 PF01384 Phosphate transporter family J4H94_RS01425 PF07687 Peptidase dimerisation domain J4H94_RS01425 PF01546 Peptidase family M20/M25/M40 J4H94_RS01430 PF00583 Acetyltransferase (GNAT) family J4H94_RS01430 PF00696 Amino acid kinase family J4H94_RS01435 PF04262 Glutamate-cysteine ligase J4H94_RS01445 PF00575 S1 RNA binding domain J4H94_RS01445 PF09371 Tex-like protein N-terminal domain J4H94_RS01445 PF16921 Tex protein YqgF-like domain J4H94_RS01445 PF17674 HHH domain J4H94_RS01455 PF00563 EAL domain J4H94_RS01455 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS01455 PF03707 Bacterial signalling protein N terminal repeat J4H94_RS01455 PF13188 PAS domain J4H94_RS01470 PF02321 Outer membrane efflux protein J4H94_RS01475 PF03412 Peptidase C39 family J4H94_RS01475 PF00664 ABC transporter transmembrane region J4H94_RS01475 PF00005 ABC transporter J4H94_RS01480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4H94_RS01480 PF00529 HlyD membrane-fusion protein of T1SS J4H94_RS01485 PF00072 Response regulator receiver domain J4H94_RS01485 PF00486 Transcriptional regulatory protein, C terminal J4H94_RS01490 PF00672 HAMP domain J4H94_RS01490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS01490 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS01495 PF08443 RimK-like ATP-grasp domain J4H94_RS01495 PF18030 RimK PreATP-grasp domain J4H94_RS01500 PF08443 RimK-like ATP-grasp domain J4H94_RS01500 PF18030 RimK PreATP-grasp domain J4H94_RS01505 PF01479 S4 domain J4H94_RS01510 PF01430 Hsp33 protein J4H94_RS01515 PF01293 Phosphoenolpyruvate carboxykinase J4H94_RS01520 PF00881 Nitroreductase family J4H94_RS01530 PF00270 DEAD/DEAH box helicase J4H94_RS01530 PF00271 Helicase conserved C-terminal domain J4H94_RS01530 PF00570 HRDC domain J4H94_RS01530 PF09382 RQC domain J4H94_RS01530 PF16124 RecQ zinc-binding J4H94_RS01540 PF12146 Serine aminopeptidase, S33 J4H94_RS01550 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J4H94_RS01550 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J4H94_RS01565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4H94_RS01575 PF00248 Aldo/keto reductase family J4H94_RS01615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS01615 PF03466 LysR substrate binding domain J4H94_RS01620 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4H94_RS01620 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4H94_RS01620 PF00378 Enoyl-CoA hydratase/isomerase J4H94_RS01625 PF12806 Acetyl-CoA dehydrogenase C-terminal like J4H94_RS01625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4H94_RS01625 PF02770 Acyl-CoA dehydrogenase, middle domain J4H94_RS01625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4H94_RS01630 PF00465 Iron-containing alcohol dehydrogenase J4H94_RS01645 PF02634 FdhD/NarQ family J4H94_RS01650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS01650 PF08448 PAS fold J4H94_RS01650 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS01650 PF13188 PAS domain J4H94_RS01650 PF00072 Response regulator receiver domain J4H94_RS01655 PF13419 Haloacid dehalogenase-like hydrolase J4H94_RS01660 PF00293 NUDIX domain J4H94_RS01665 PF00459 Inositol monophosphatase family J4H94_RS01680 PF00343 Carbohydrate phosphorylase J4H94_RS01685 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J4H94_RS01710 PF00561 alpha/beta hydrolase fold J4H94_RS01715 PF02580 D-Tyr-tRNA(Tyr) deacylase J4H94_RS01720 PF03682 Uncharacterised protein family (UPF0158) J4H94_RS01730 PF00902 Sec-independent protein translocase protein (TatC) J4H94_RS01735 PF02416 mttA/Hcf106 family J4H94_RS01740 PF02416 mttA/Hcf106 family J4H94_RS01745 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J4H94_RS01750 PF01502 Phosphoribosyl-AMP cyclohydrolase J4H94_RS01755 PF03109 ABC1 family J4H94_RS01765 PF01209 ubiE/COQ5 methyltransferase family J4H94_RS01780 PF00004 ATPase family associated with various cellular activities (AAA) J4H94_RS01780 PF07724 AAA domain (Cdc48 subfamily) J4H94_RS01785 PF00227 Proteasome subunit J4H94_RS01795 PF00588 SpoU rRNA Methylase family J4H94_RS01805 PF02954 Bacterial regulatory protein, Fis family J4H94_RS01805 PF00072 Response regulator receiver domain J4H94_RS01805 PF00158 Sigma-54 interaction domain J4H94_RS01810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS01810 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS01810 PF00989 PAS fold J4H94_RS01825 PF00120 Glutamine synthetase, catalytic domain J4H94_RS01825 PF03951 Glutamine synthetase, beta-Grasp domain J4H94_RS01830 PF02568 Thiamine biosynthesis protein (ThiI) J4H94_RS01830 PF02926 THUMP domain J4H94_RS01835 PF03144 Elongation factor Tu domain 2 J4H94_RS01835 PF00009 Elongation factor Tu GTP binding domain J4H94_RS01835 PF00679 Elongation factor G C-terminus J4H94_RS01840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS01855 PF12697 Alpha/beta hydrolase family J4H94_RS01875 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS01875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS01880 PF02954 Bacterial regulatory protein, Fis family J4H94_RS01880 PF00072 Response regulator receiver domain J4H94_RS01880 PF00158 Sigma-54 interaction domain J4H94_RS01885 PF07308 Protein of unknown function (DUF1456) J4H94_RS01895 PF00384 Molybdopterin oxidoreductase J4H94_RS01895 PF01568 Molydopterin dinucleotide binding domain J4H94_RS01895 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4H94_RS01915 PF00563 EAL domain J4H94_RS01915 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS01920 PF13416 Bacterial extracellular solute-binding protein J4H94_RS01925 PF05139 Erythromycin esterase J4H94_RS01925 PF00156 Phosphoribosyl transferase domain J4H94_RS01930 PF01738 Dienelactone hydrolase family J4H94_RS01930 PF00156 Phosphoribosyl transferase domain J4H94_RS01950 PF03334 Na+/H+ antiporter subunit J4H94_RS01965 PF00361 Proton-conducting membrane transporter J4H94_RS01965 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J4H94_RS01970 PF00361 Proton-conducting membrane transporter J4H94_RS01975 PF00361 Proton-conducting membrane transporter J4H94_RS01985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS01990 PF00072 Response regulator receiver domain J4H94_RS01990 PF00486 Transcriptional regulatory protein, C terminal J4H94_RS02015 PF00196 Bacterial regulatory proteins, luxR family J4H94_RS02015 PF00072 Response regulator receiver domain J4H94_RS02040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4H94_RS02040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4H94_RS02045 PF02913 FAD linked oxidases, C-terminal domain J4H94_RS02045 PF01565 FAD binding domain J4H94_RS02050 PF01557 Fumarylacetoacetate (FAA) hydrolase family J4H94_RS02055 PF06977 SdiA-regulated J4H94_RS02065 PF07411 Domain of unknown function (DUF1508) J4H94_RS02070 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J4H94_RS02075 PF00291 Pyridoxal-phosphate dependent enzyme J4H94_RS02075 PF00585 C-terminal regulatory domain of Threonine dehydratase J4H94_RS02090 PF00293 NUDIX domain J4H94_RS02095 PF00391 PEP-utilising enzyme, mobile domain J4H94_RS02095 PF02896 PEP-utilising enzyme, TIM barrel domain J4H94_RS02095 PF05524 PEP-utilising enzyme, N-terminal J4H94_RS02095 PF01590 GAF domain J4H94_RS02105 PF01925 Sulfite exporter TauE/SafE J4H94_RS02110 PF01790 Prolipoprotein diacylglyceryl transferase J4H94_RS02115 PF00303 Thymidylate synthase J4H94_RS02120 PF13614 AAA domain J4H94_RS02130 PF02653 Branched-chain amino acid transport system / permease component J4H94_RS02135 PF00005 ABC transporter J4H94_RS02140 PF12399 Branched-chain amino acid ATP-binding cassette transporter J4H94_RS02140 PF00005 ABC transporter J4H94_RS02155 PF00072 Response regulator receiver domain J4H94_RS02160 PF01476 LysM domain J4H94_RS02160 PF08525 Opacity-associated protein A N-terminal motif J4H94_RS02160 PF01551 Peptidase family M23 J4H94_RS02165 PF00571 CBS domain J4H94_RS02165 PF03471 Transporter associated domain J4H94_RS02165 PF01595 Cyclin M transmembrane N-terminal domain J4H94_RS02170 PF11808 Phosphate regulon sensor protein PhoR J4H94_RS02170 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS02170 PF00989 PAS fold J4H94_RS02170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS02175 PF00072 Response regulator receiver domain J4H94_RS02175 PF00486 Transcriptional regulatory protein, C terminal J4H94_RS02180 PF01040 UbiA prenyltransferase family J4H94_RS02185 PF04345 Chorismate lyase J4H94_RS02190 PF07729 FCD domain J4H94_RS02190 PF00392 Bacterial regulatory proteins, gntR family J4H94_RS02195 PF02913 FAD linked oxidases, C-terminal domain J4H94_RS02195 PF01565 FAD binding domain J4H94_RS02200 PF01565 FAD binding domain J4H94_RS02205 PF13183 4Fe-4S dicluster domain J4H94_RS02205 PF02754 Cysteine-rich domain J4H94_RS02210 PF03928 Haem-degrading J4H94_RS02215 PF01274 Malate synthase J4H94_RS02220 PF02652 L-lactate permease J4H94_RS02225 PF00301 Rubredoxin J4H94_RS02230 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4H94_RS02230 PF18113 Rubredoxin binding C-terminal domain J4H94_RS02235 PF00216 Bacterial DNA-binding protein J4H94_RS02250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS02250 PF03466 LysR substrate binding domain J4H94_RS02255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4H94_RS02255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4H94_RS02255 PF02770 Acyl-CoA dehydrogenase, middle domain J4H94_RS02260 PF02515 CoA-transferase family III J4H94_RS02265 PF08240 Alcohol dehydrogenase GroES-like domain J4H94_RS02265 PF00107 Zinc-binding dehydrogenase J4H94_RS02270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS02270 PF03466 LysR substrate binding domain J4H94_RS02275 PF04011 LemA family J4H94_RS02280 PF04536 TPM domain J4H94_RS02290 PF00004 ATPase family associated with various cellular activities (AAA) J4H94_RS02290 PF17862 AAA+ lid domain J4H94_RS02290 PF01434 Peptidase family M41 J4H94_RS02310 PF01042 Endoribonuclease L-PSP J4H94_RS02315 PF13291 ACT domain J4H94_RS02315 PF04607 Region found in RelA / SpoT proteins J4H94_RS02315 PF02824 TGS domain J4H94_RS02320 PF01192 RNA polymerase Rpb6 J4H94_RS02325 PF00625 Guanylate kinase J4H94_RS02330 PF03755 YicC-like family, N-terminal region J4H94_RS02330 PF08340 Domain of unknown function (DUF1732) J4H94_RS02335 PF03725 3' exoribonuclease family, domain 2 J4H94_RS02335 PF01138 3' exoribonuclease family, domain 1 J4H94_RS02345 PF03372 Endonuclease/Exonuclease/phosphatase family J4H94_RS02350 PF00156 Phosphoribosyl transferase domain J4H94_RS02365 PF00696 Amino acid kinase family J4H94_RS02370 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4H94_RS02370 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4H94_RS02370 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4H94_RS02370 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4H94_RS02375 PF00692 dUTPase J4H94_RS02380 PF02441 Flavoprotein J4H94_RS02380 PF04127 DNA / pantothenate metabolism flavoprotein J4H94_RS02385 PF04002 RadC-like JAB domain J4H94_RS02400 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4H94_RS02400 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4H94_RS02400 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain J4H94_RS02405 PF02743 Cache domain J4H94_RS02405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS02405 PF00672 HAMP domain J4H94_RS02420 PF13091 PLD-like domain J4H94_RS02425 PF01266 FAD dependent oxidoreductase J4H94_RS02430 PF01037 Lrp/AsnC ligand binding domain J4H94_RS02435 PF01266 FAD dependent oxidoreductase J4H94_RS02440 PF01042 Endoribonuclease L-PSP J4H94_RS02450 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4H94_RS02460 PF00156 Phosphoribosyl transferase domain J4H94_RS02470 PF16657 Maltogenic Amylase, C-terminal domain J4H94_RS02470 PF00128 Alpha amylase, catalytic domain J4H94_RS02475 PF00128 Alpha amylase, catalytic domain J4H94_RS02480 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4H94_RS02480 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4H94_RS02490 PF00465 Iron-containing alcohol dehydrogenase J4H94_RS02495 PF00171 Aldehyde dehydrogenase family J4H94_RS02500 PF09339 IclR helix-turn-helix domain J4H94_RS02500 PF01614 Bacterial transcriptional regulator J4H94_RS02505 PF03006 Haemolysin-III related J4H94_RS02510 PF13361 UvrD-like helicase C-terminal domain J4H94_RS02510 PF00580 UvrD/REP helicase N-terminal domain J4H94_RS02515 PF00563 EAL domain J4H94_RS02515 PF03707 Bacterial signalling protein N terminal repeat J4H94_RS02515 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS02520 PF02028 BCCT, betaine/carnitine/choline family transporter J4H94_RS02525 PF13335 Magnesium chelatase, subunit ChlI C-terminal J4H94_RS02525 PF01078 Magnesium chelatase, subunit ChlI J4H94_RS02535 PF00543 Nitrogen regulatory protein P-II J4H94_RS02540 PF00909 Ammonium Transporter Family J4H94_RS02545 PF00909 Ammonium Transporter Family J4H94_RS02550 PF01894 Uncharacterised protein family UPF0047 J4H94_RS02560 PF13419 Haloacid dehalogenase-like hydrolase J4H94_RS02565 PF00589 Phage integrase family J4H94_RS02565 PF02899 Phage integrase, N-terminal SAM-like domain J4H94_RS02575 PF01678 Diaminopimelate epimerase J4H94_RS02580 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J4H94_RS02580 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J4H94_RS02585 PF13627 Prokaryotic lipoprotein-attachment site J4H94_RS02590 PF01491 Frataxin-like domain J4H94_RS02595 PF01272 Transcription elongation factor, GreA/GreB, C-term J4H94_RS02595 PF14760 Rnk N-terminus J4H94_RS02600 PF12633 Adenylate cyclase NT domain J4H94_RS02600 PF01295 Adenylate cyclase, class-I J4H94_RS02630 PF14698 Argininosuccinate lyase C-terminal J4H94_RS02630 PF00206 Lyase J4H94_RS02635 PF07694 5TMR of 5TMR-LYT J4H94_RS02635 PF06580 Histidine kinase J4H94_RS02640 PF00072 Response regulator receiver domain J4H94_RS02640 PF04397 LytTr DNA-binding domain J4H94_RS02645 PF03900 Porphobilinogen deaminase, C-terminal domain J4H94_RS02645 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J4H94_RS02650 PF02602 Uroporphyrinogen-III synthase HemD J4H94_RS02665 PF02600 Disulfide bond formation protein DsbB J4H94_RS02670 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ J4H94_RS02685 PF00005 ABC transporter J4H94_RS02685 PF12848 ABC transporter J4H94_RS02695 PF03741 Integral membrane protein TerC family J4H94_RS02700 PF01810 LysE type translocator J4H94_RS02705 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 J4H94_RS02710 PF00563 EAL domain J4H94_RS02710 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS02710 PF03707 Bacterial signalling protein N terminal repeat J4H94_RS02715 PF03061 Thioesterase superfamily J4H94_RS02725 PF00490 Delta-aminolevulinic acid dehydratase J4H94_RS02730 PF13090 Polyphosphate kinase C-terminal domain 2 J4H94_RS02730 PF02503 Polyphosphate kinase middle domain J4H94_RS02730 PF13089 Polyphosphate kinase N-terminal domain J4H94_RS02730 PF17941 Polyphosphate kinase C-terminal domain 1 J4H94_RS02735 PF02541 Ppx/GppA phosphatase family J4H94_RS02740 PF00085 Thioredoxin J4H94_RS02745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4H94_RS02745 PF07498 Rho termination factor, N-terminal domain J4H94_RS02745 PF07497 Rho termination factor, RNA-binding domain J4H94_RS02750 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase J4H94_RS02755 PF00175 Oxidoreductase NAD-binding domain J4H94_RS02765 PF00750 tRNA synthetases class I (R) J4H94_RS02765 PF03485 Arginyl tRNA synthetase N terminal domain J4H94_RS02765 PF05746 DALR anticodon binding domain J4H94_RS02770 PF00271 Helicase conserved C-terminal domain J4H94_RS02770 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J4H94_RS02770 PF00270 DEAD/DEAH box helicase J4H94_RS02770 PF18074 Primosomal protein N C-terminal domain J4H94_RS02770 PF17764 3′ DNA-binding domain (3′BD) J4H94_RS02775 PF01197 Ribosomal protein L31 J4H94_RS02785 PF03949 Malic enzyme, NAD binding domain J4H94_RS02785 PF00390 Malic enzyme, N-terminal domain J4H94_RS02790 PF00912 Transglycosylase J4H94_RS02790 PF17092 Penicillin-binding protein OB-like domain J4H94_RS02790 PF00905 Penicillin binding protein transpeptidase domain J4H94_RS02795 PF11104 Type IV pilus assembly protein PilM; J4H94_RS02800 PF05137 Fimbrial assembly protein (PilN) J4H94_RS02805 PF04350 Pilus assembly protein, PilO J4H94_RS02810 PF04351 Pilus assembly protein, PilP J4H94_RS02815 PF11741 AMIN domain J4H94_RS02815 PF00263 Bacterial type II and III secretion system protein J4H94_RS02815 PF03958 Bacterial type II/III secretion system short domain J4H94_RS02815 PF07660 Secretin and TonB N terminus short domain J4H94_RS02820 PF01202 Shikimate kinase J4H94_RS02825 PF01761 3-dehydroquinate synthase J4H94_RS02835 PF01493 GXGXG motif J4H94_RS02835 PF01645 Conserved region in glutamate synthase J4H94_RS02835 PF00310 Glutamine amidotransferases class-II J4H94_RS02835 PF04898 Glutamate synthase central domain J4H94_RS02840 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J4H94_RS02840 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4H94_RS02845 PF01208 Uroporphyrinogen decarboxylase (URO-D) J4H94_RS02850 PF07690 Major Facilitator Superfamily J4H94_RS02855 PF03466 LysR substrate binding domain J4H94_RS02855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS02870 PF02801 Beta-ketoacyl synthase, C-terminal domain J4H94_RS02870 PF00109 Beta-ketoacyl synthase, N-terminal domain J4H94_RS02885 PF02801 Beta-ketoacyl synthase, C-terminal domain J4H94_RS02885 PF00109 Beta-ketoacyl synthase, N-terminal domain J4H94_RS02895 PF01494 FAD binding domain J4H94_RS02915 PF00221 Aromatic amino acid lyase J4H94_RS02930 PF00501 AMP-binding enzyme J4H94_RS02930 PF13193 AMP-binding enzyme C-terminal domain J4H94_RS02940 PF00550 Phosphopantetheine attachment site J4H94_RS02945 PF00550 Phosphopantetheine attachment site J4H94_RS02960 PF00085 Thioredoxin J4H94_RS02965 PF01053 Cys/Met metabolism PLP-dependent enzyme J4H94_RS02970 PF02080 TrkA-C domain J4H94_RS02970 PF03600 Citrate transporter J4H94_RS02980 PF03979 Sigma-70 factor, region 1.1 J4H94_RS02980 PF04546 Sigma-70, non-essential region J4H94_RS02980 PF00140 Sigma-70 factor, region 1.2 J4H94_RS02980 PF04542 Sigma-70 region 2 J4H94_RS02980 PF04539 Sigma-70 region 3 J4H94_RS02980 PF04545 Sigma-70, region 4 J4H94_RS02985 PF08278 DNA primase DnaG DnaB-binding J4H94_RS02985 PF10410 DnaB-helicase binding domain of primase J4H94_RS02985 PF01807 CHC2 zinc finger J4H94_RS02985 PF08275 DNA primase catalytic core, N-terminal domain J4H94_RS02985 PF13662 Toprim domain J4H94_RS02990 PF01165 Ribosomal protein S21 J4H94_RS02995 PF00814 Glycoprotease family J4H94_RS03000 PF02660 Glycerol-3-phosphate acyltransferase J4H94_RS03010 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J4H94_RS03015 PF12627 Probable RNA and SrmB- binding site of polymerase A J4H94_RS03015 PF01966 HD domain J4H94_RS03015 PF01743 Poly A polymerase head domain J4H94_RS03020 PF04293 SpoVR like protein J4H94_RS03025 PF04285 Protein of unknown function (DUF444) J4H94_RS03030 PF08298 PrkA AAA domain J4H94_RS03030 PF06798 PrkA serine protein kinase C-terminal domain J4H94_RS03035 PF00581 Rhodanese-like domain J4H94_RS03040 PF00149 Calcineurin-like phosphoesterase J4H94_RS03045 PF04379 ApaG domain J4H94_RS03050 PF00398 Ribosomal RNA adenine dimethylase J4H94_RS03055 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J4H94_RS03060 PF09312 SurA N-terminal domain J4H94_RS03060 PF00639 PPIC-type PPIASE domain J4H94_RS03065 PF04453 LPS transport system D J4H94_RS03065 PF03968 OstA-like protein J4H94_RS03070 PF01636 Phosphotransferase enzyme family J4H94_RS03075 PF00483 Nucleotidyl transferase J4H94_RS03080 PF05099 Tellurite resistance protein TerB J4H94_RS03080 PF00226 DnaJ domain J4H94_RS03090 PF07730 Histidine kinase J4H94_RS03090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS03090 PF05384 Sensor protein DegS J4H94_RS03095 PF00072 Response regulator receiver domain J4H94_RS03095 PF00196 Bacterial regulatory proteins, luxR family J4H94_RS03100 PF00005 ABC transporter J4H94_RS03100 PF08402 TOBE domain J4H94_RS03110 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS03115 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS03120 PF00171 Aldehyde dehydrogenase family J4H94_RS03125 PF00202 Aminotransferase class-III J4H94_RS03130 PF00834 Ribulose-phosphate 3 epimerase family J4H94_RS03140 PF04715 Anthranilate synthase component I, N terminal region J4H94_RS03140 PF00425 chorismate binding enzyme J4H94_RS03145 PF00563 EAL domain J4H94_RS03145 PF03707 Bacterial signalling protein N terminal repeat J4H94_RS03145 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS03150 PF00117 Glutamine amidotransferase class-I J4H94_RS03155 PF02885 Glycosyl transferase family, helical bundle domain J4H94_RS03155 PF00591 Glycosyl transferase family, a/b domain J4H94_RS03160 PF00218 Indole-3-glycerol phosphate synthase J4H94_RS03165 PF00027 Cyclic nucleotide-binding domain J4H94_RS03165 PF13545 Crp-like helix-turn-helix domain J4H94_RS03170 PF02566 OsmC-like protein J4H94_RS03175 PF03232 Ubiquinone biosynthesis protein COQ7 J4H94_RS03180 PF01230 HIT domain J4H94_RS03185 PF17862 AAA+ lid domain J4H94_RS03185 PF06480 FtsH Extracellular J4H94_RS03185 PF01434 Peptidase family M41 J4H94_RS03185 PF00004 ATPase family associated with various cellular activities (AAA) J4H94_RS03195 PF03653 Uncharacterised protein family (UPF0093) J4H94_RS03200 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4H94_RS03200 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4H94_RS03205 PF01521 Iron-sulphur cluster biosynthesis J4H94_RS03210 PF03702 Anhydro-N-acetylmuramic acid kinase J4H94_RS03215 PF01551 Peptidase family M23 J4H94_RS03215 PF04225 Opacity-associated protein A LysM-like domain J4H94_RS03220 PF00579 tRNA synthetases class I (W and Y) J4H94_RS03220 PF01479 S4 domain J4H94_RS03255 PF02237 Biotin protein ligase C terminal domain J4H94_RS03255 PF03099 Biotin/lipoate A/B protein ligase family J4H94_RS03255 PF08279 HTH domain J4H94_RS03260 PF03309 Type III pantothenate kinase J4H94_RS03285 PF00009 Elongation factor Tu GTP binding domain J4H94_RS03285 PF03144 Elongation factor Tu domain 2 J4H94_RS03285 PF03143 Elongation factor Tu C-terminal domain J4H94_RS03295 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J4H94_RS03300 PF00467 KOW motif J4H94_RS03300 PF02357 Transcription termination factor nusG J4H94_RS03305 PF00298 Ribosomal protein L11, RNA binding domain J4H94_RS03305 PF03946 Ribosomal protein L11, N-terminal domain J4H94_RS03310 PF00687 Ribosomal protein L1p/L10e family J4H94_RS03315 PF00466 Ribosomal protein L10 J4H94_RS03320 PF00542 Ribosomal protein L7/L12 C-terminal domain J4H94_RS03320 PF16320 Ribosomal protein L7/L12 dimerisation domain J4H94_RS03325 PF04563 RNA polymerase beta subunit J4H94_RS03325 PF00562 RNA polymerase Rpb2, domain 6 J4H94_RS03325 PF10385 RNA polymerase beta subunit external 1 domain J4H94_RS03325 PF04565 RNA polymerase Rpb2, domain 3 J4H94_RS03325 PF04561 RNA polymerase Rpb2, domain 2 J4H94_RS03325 PF04560 RNA polymerase Rpb2, domain 7 J4H94_RS03330 PF04997 RNA polymerase Rpb1, domain 1 J4H94_RS03330 PF05000 RNA polymerase Rpb1, domain 4 J4H94_RS03330 PF04998 RNA polymerase Rpb1, domain 5 J4H94_RS03330 PF00623 RNA polymerase Rpb1, domain 2 J4H94_RS03330 PF04983 RNA polymerase Rpb1, domain 3 J4H94_RS03335 PF00164 Ribosomal protein S12/S23 J4H94_RS03340 PF00177 Ribosomal protein S7p/S5e J4H94_RS03345 PF00679 Elongation factor G C-terminus J4H94_RS03345 PF14492 Elongation Factor G, domain II J4H94_RS03345 PF03764 Elongation factor G, domain IV J4H94_RS03345 PF00009 Elongation factor Tu GTP binding domain J4H94_RS03345 PF03144 Elongation factor Tu domain 2 J4H94_RS03350 PF00009 Elongation factor Tu GTP binding domain J4H94_RS03350 PF03144 Elongation factor Tu domain 2 J4H94_RS03350 PF03143 Elongation factor Tu C-terminal domain J4H94_RS03355 PF00338 Ribosomal protein S10p/S20e J4H94_RS03360 PF00297 Ribosomal protein L3 J4H94_RS03365 PF00573 Ribosomal protein L4/L1 family J4H94_RS03370 PF00276 Ribosomal protein L23 J4H94_RS03375 PF00181 Ribosomal Proteins L2, RNA binding domain J4H94_RS03375 PF03947 Ribosomal Proteins L2, C-terminal domain J4H94_RS03380 PF00203 Ribosomal protein S19 J4H94_RS03385 PF00237 Ribosomal protein L22p/L17e J4H94_RS03390 PF00189 Ribosomal protein S3, C-terminal domain J4H94_RS03390 PF07650 KH domain J4H94_RS03395 PF00252 Ribosomal protein L16p/L10e J4H94_RS03400 PF00831 Ribosomal L29 protein J4H94_RS03405 PF00366 Ribosomal protein S17 J4H94_RS03410 PF00238 Ribosomal protein L14p/L23e J4H94_RS03415 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J4H94_RS03415 PF00467 KOW motif J4H94_RS03420 PF00281 Ribosomal protein L5 J4H94_RS03420 PF00673 ribosomal L5P family C-terminus J4H94_RS03425 PF00253 Ribosomal protein S14p/S29e J4H94_RS03430 PF00410 Ribosomal protein S8 J4H94_RS03435 PF00347 Ribosomal protein L6 J4H94_RS03440 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J4H94_RS03445 PF03719 Ribosomal protein S5, C-terminal domain J4H94_RS03445 PF00333 Ribosomal protein S5, N-terminal domain J4H94_RS03450 PF00327 Ribosomal protein L30p/L7e J4H94_RS03455 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J4H94_RS03460 PF00344 SecY translocase J4H94_RS03465 PF00444 Ribosomal protein L36 J4H94_RS03470 PF00416 Ribosomal protein S13/S18 J4H94_RS03475 PF00411 Ribosomal protein S11 J4H94_RS03480 PF00163 Ribosomal protein S4/S9 N-terminal domain J4H94_RS03480 PF01479 S4 domain J4H94_RS03485 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J4H94_RS03485 PF01000 RNA polymerase Rpb3/RpoA insert domain J4H94_RS03485 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J4H94_RS03490 PF01196 Ribosomal protein L17 J4H94_RS03495 PF00199 Catalase J4H94_RS03495 PF06628 Catalase-related immune-responsive J4H94_RS03500 PF17755 UvrA DNA-binding domain J4H94_RS03500 PF17760 UvrA interaction domain J4H94_RS03505 PF07690 Major Facilitator Superfamily J4H94_RS03510 PF00436 Single-strand binding protein family J4H94_RS03520 PF01370 NAD dependent epimerase/dehydratase family J4H94_RS03525 PF03922 OmpW family J4H94_RS03535 PF01618 MotA/TolQ/ExbB proton channel family J4H94_RS03540 PF01618 MotA/TolQ/ExbB proton channel family J4H94_RS03545 PF02472 Biopolymer transport protein ExbD/TolR J4H94_RS03550 PF03544 Gram-negative bacterial TonB protein C-terminal J4H94_RS03570 PF00005 ABC transporter J4H94_RS03585 PF00085 Thioredoxin J4H94_RS03590 PF04143 Sulphur transport J4H94_RS03595 PF01206 Sulfurtransferase TusA J4H94_RS03615 PF03477 ATP cone domain J4H94_RS03620 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4H94_RS03620 PF01872 RibD C-terminal domain J4H94_RS03625 PF00677 Lumazine binding domain J4H94_RS03630 PF00925 GTP cyclohydrolase II J4H94_RS03630 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J4H94_RS03635 PF00885 6,7-dimethyl-8-ribityllumazine synthase J4H94_RS03640 PF01029 NusB family J4H94_RS03645 PF00586 AIR synthase related protein, N-terminal domain J4H94_RS03645 PF02769 AIR synthase related protein, C-terminal domain J4H94_RS03650 PF04608 Phosphatidylglycerophosphatase A J4H94_RS03660 PF00925 GTP cyclohydrolase II J4H94_RS03670 PF01497 Periplasmic binding protein J4H94_RS03675 PF07715 TonB-dependent Receptor Plug Domain J4H94_RS03675 PF00593 TonB dependent receptor J4H94_RS03685 PF00149 Calcineurin-like phosphoesterase J4H94_RS03685 PF12320 Type 5 capsule protein repressor C-terminal domain J4H94_RS03700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS03705 PF00072 Response regulator receiver domain J4H94_RS03705 PF00486 Transcriptional regulatory protein, C terminal J4H94_RS03710 PF03413 Peptidase propeptide and YPEB domain J4H94_RS03735 PF00849 RNA pseudouridylate synthase J4H94_RS03740 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J4H94_RS03740 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J4H94_RS03745 PF00156 Phosphoribosyl transferase domain J4H94_RS03750 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain J4H94_RS03750 PF00591 Glycosyl transferase family, a/b domain J4H94_RS03750 PF02885 Glycosyl transferase family, helical bundle domain J4H94_RS03755 PF00106 short chain dehydrogenase J4H94_RS03765 PF02667 Short chain fatty acid transporter J4H94_RS03775 PF02743 Cache domain J4H94_RS03775 PF00672 HAMP domain J4H94_RS03775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS03780 PF01037 Lrp/AsnC ligand binding domain J4H94_RS03780 PF13404 AsnC-type helix-turn-helix domain J4H94_RS03790 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J4H94_RS03790 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J4H94_RS03795 PF00209 Sodium:neurotransmitter symporter family J4H94_RS03800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4H94_RS03805 PF04209 homogentisate 1,2-dioxygenase J4H94_RS03815 PF02798 Glutathione S-transferase, N-terminal domain J4H94_RS03815 PF14497 Glutathione S-transferase, C-terminal domain J4H94_RS03820 PF00209 Sodium:neurotransmitter symporter family J4H94_RS03825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS03825 PF00672 HAMP domain J4H94_RS03825 PF02743 Cache domain J4H94_RS03840 PF00999 Sodium/hydrogen exchanger family J4H94_RS03840 PF02254 TrkA-N domain J4H94_RS03845 PF00270 DEAD/DEAH box helicase J4H94_RS03845 PF00271 Helicase conserved C-terminal domain J4H94_RS03850 PF01810 LysE type translocator J4H94_RS03860 PF08240 Alcohol dehydrogenase GroES-like domain J4H94_RS03860 PF00107 Zinc-binding dehydrogenase J4H94_RS03870 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4H94_RS03870 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4H94_RS03875 PF00850 Histone deacetylase domain J4H94_RS03895 PF04228 Putative neutral zinc metallopeptidase J4H94_RS03920 PF00196 Bacterial regulatory proteins, luxR family J4H94_RS03920 PF00072 Response regulator receiver domain J4H94_RS03925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS03925 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J4H94_RS03925 PF07730 Histidine kinase J4H94_RS03925 PF00672 HAMP domain J4H94_RS03930 PF07690 Major Facilitator Superfamily J4H94_RS03940 PF07690 Major Facilitator Superfamily J4H94_RS03945 PF00384 Molybdopterin oxidoreductase J4H94_RS03945 PF01568 Molydopterin dinucleotide binding domain J4H94_RS03945 PF14710 Respiratory nitrate reductase alpha N-terminal J4H94_RS03950 PF13247 4Fe-4S dicluster domain J4H94_RS03950 PF14711 Respiratory nitrate reductase beta C-terminal J4H94_RS03955 PF02613 Nitrate reductase delta subunit J4H94_RS03960 PF02665 Nitrate reductase gamma subunit J4H94_RS03965 PF09312 SurA N-terminal domain J4H94_RS03970 PF06463 Molybdenum Cofactor Synthesis C J4H94_RS03970 PF04055 Radical SAM superfamily J4H94_RS03975 PF00994 Probable molybdopterin binding domain J4H94_RS03980 PF00994 Probable molybdopterin binding domain J4H94_RS03980 PF03454 MoeA C-terminal region (domain IV) J4H94_RS03980 PF03453 MoeA N-terminal region (domain I and II) J4H94_RS03985 PF01219 Prokaryotic diacylglycerol kinase J4H94_RS03990 PF00884 Sulfatase J4H94_RS04005 PF00175 Oxidoreductase NAD-binding domain J4H94_RS04005 PF00111 2Fe-2S iron-sulfur cluster binding domain J4H94_RS04005 PF00970 Oxidoreductase FAD-binding domain J4H94_RS04010 PF00753 Metallo-beta-lactamase superfamily J4H94_RS04015 PF05958 tRNA (Uracil-5-)-methyltransferase J4H94_RS04020 PF00860 Permease family J4H94_RS04025 PF01965 DJ-1/PfpI family J4H94_RS04030 PF13478 XdhC Rossmann domain J4H94_RS04030 PF02625 XdhC and CoxI family J4H94_RS04035 PF12804 MobA-like NTP transferase domain J4H94_RS04035 PF00132 Bacterial transferase hexapeptide (six repeats) J4H94_RS04040 PF00111 2Fe-2S iron-sulfur cluster binding domain J4H94_RS04040 PF01799 [2Fe-2S] binding domain J4H94_RS04045 PF03450 CO dehydrogenase flavoprotein C-terminal domain J4H94_RS04045 PF00941 FAD binding domain in molybdopterin dehydrogenase J4H94_RS04050 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J4H94_RS04050 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J4H94_RS04075 PF13411 MerR HTH family regulatory protein J4H94_RS04080 PF05175 Methyltransferase small domain J4H94_RS04085 PF00970 Oxidoreductase FAD-binding domain J4H94_RS04085 PF00175 Oxidoreductase NAD-binding domain J4H94_RS04090 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J4H94_RS04090 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J4H94_RS04095 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS04100 PF09345 Domain of unknown function (DUF1987) J4H94_RS04115 PF00005 ABC transporter J4H94_RS04115 PF12848 ABC transporter J4H94_RS04120 PF00464 Serine hydroxymethyltransferase J4H94_RS04130 PF07238 PilZ domain J4H94_RS04135 PF18073 Rubredoxin metal binding domain J4H94_RS04150 PF01741 Large-conductance mechanosensitive channel, MscL J4H94_RS04155 PF03150 Di-haem cytochrome c peroxidase J4H94_RS04155 PF00034 Cytochrome c J4H94_RS04160 PF13654 AAA domain J4H94_RS04160 PF05362 Lon protease (S16) C-terminal proteolytic domain J4H94_RS04170 PF03350 Uncharacterized protein family, UPF0114 J4H94_RS04180 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J4H94_RS04190 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J4H94_RS04190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4H94_RS04200 PF00348 Polyprenyl synthetase J4H94_RS04205 PF00829 Ribosomal prokaryotic L21 protein J4H94_RS04210 PF01016 Ribosomal L27 protein J4H94_RS04215 PF01018 GTP1/OBG J4H94_RS04215 PF01926 50S ribosome-binding GTPase J4H94_RS04220 PF00696 Amino acid kinase family J4H94_RS04220 PF01472 PUA domain J4H94_RS04225 PF05981 CreA protein J4H94_RS04230 PF01649 Ribosomal protein S20 J4H94_RS04235 PF03023 Lipid II flippase MurJ J4H94_RS04240 PF06574 FAD synthetase J4H94_RS04240 PF01687 Riboflavin kinase J4H94_RS04245 PF00133 tRNA synthetases class I (I, L, M and V) J4H94_RS04245 PF08264 Anticodon-binding domain of tRNA J4H94_RS04245 PF06827 Zinc finger found in FPG and IleRS J4H94_RS04250 PF01252 Signal peptidase (SPase) II J4H94_RS04255 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4H94_RS04260 PF02401 LytB protein J4H94_RS04290 PF05567 Neisseria PilC beta-propeller domain J4H94_RS04300 PF01266 FAD dependent oxidoreductase J4H94_RS04305 PF01253 Translation initiation factor SUI1 J4H94_RS04310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J4H94_RS04310 PF17810 Arginine decarboxylase helical bundle domain J4H94_RS04310 PF17944 Arginine decarboxylase C-terminal helical extension J4H94_RS04320 PF01554 MatE J4H94_RS04350 PF13847 Methyltransferase domain J4H94_RS04360 PF00356 Bacterial regulatory proteins, lacI family J4H94_RS04360 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J4H94_RS04365 PF02896 PEP-utilising enzyme, TIM barrel domain J4H94_RS04365 PF05524 PEP-utilising enzyme, N-terminal J4H94_RS04365 PF00391 PEP-utilising enzyme, mobile domain J4H94_RS04365 PF00381 PTS HPr component phosphorylation site J4H94_RS04365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4H94_RS04370 PF00294 pfkB family carbohydrate kinase J4H94_RS04375 PF02378 Phosphotransferase system, EIIC J4H94_RS04375 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4H94_RS04390 PF16658 Class II release factor RF3, C-terminal domain J4H94_RS04390 PF00009 Elongation factor Tu GTP binding domain J4H94_RS04390 PF03144 Elongation factor Tu domain 2 J4H94_RS04395 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J4H94_RS04395 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J4H94_RS04405 PF18331 PKHD-type hydroxylase C-terminal domain J4H94_RS04405 PF13640 2OG-Fe(II) oxygenase superfamily J4H94_RS04410 PF00593 TonB dependent receptor J4H94_RS04410 PF07715 TonB-dependent Receptor Plug Domain J4H94_RS04415 PF00175 Oxidoreductase NAD-binding domain J4H94_RS04415 PF00258 Flavodoxin J4H94_RS04415 PF00667 FAD binding domain J4H94_RS04435 PF00593 TonB dependent receptor J4H94_RS04435 PF07715 TonB-dependent Receptor Plug Domain J4H94_RS04445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS04445 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS04450 PF02954 Bacterial regulatory protein, Fis family J4H94_RS04450 PF00072 Response regulator receiver domain J4H94_RS04460 PF01476 LysM domain J4H94_RS04460 PF08525 Opacity-associated protein A N-terminal motif J4H94_RS04460 PF01551 Peptidase family M23 J4H94_RS04475 PF01699 Sodium/calcium exchanger protein J4H94_RS04480 PF01699 Sodium/calcium exchanger protein J4H94_RS04485 PF05036 Sporulation related domain J4H94_RS04485 PF03330 Lytic transglycolase J4H94_RS04490 PF02934 GatB/GatE catalytic domain J4H94_RS04490 PF02637 GatB domain J4H94_RS04495 PF01425 Amidase J4H94_RS04500 PF02686 Glu-tRNAGln amidotransferase C subunit J4H94_RS04510 PF04085 rod shape-determining protein MreC J4H94_RS04525 PF02545 Maf-like protein J4H94_RS04530 PF10150 Ribonuclease E/G family J4H94_RS04530 PF00575 S1 RNA binding domain J4H94_RS04540 PF00795 Carbon-nitrogen hydrolase J4H94_RS04545 PF01523 Putative modulator of DNA gyrase J4H94_RS04550 PF04751 Protein of unknown function (DUF615) J4H94_RS04555 PF01523 Putative modulator of DNA gyrase J4H94_RS04560 PF00381 PTS HPr component phosphorylation site J4H94_RS04565 PF03668 P-loop ATPase protein family J4H94_RS04570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4H94_RS04575 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J4H94_RS04580 PF00309 Sigma-54 factor, Activator interacting domain (AID) J4H94_RS04580 PF04552 Sigma-54, DNA binding domain J4H94_RS04580 PF04963 Sigma-54 factor, core binding domain J4H94_RS04585 PF00005 ABC transporter J4H94_RS04585 PF12399 Branched-chain amino acid ATP-binding cassette transporter J4H94_RS04605 PF00571 CBS domain J4H94_RS04605 PF01380 SIS domain J4H94_RS04610 PF00005 ABC transporter J4H94_RS04615 PF02405 Permease MlaE J4H94_RS04620 PF02470 MlaD protein J4H94_RS04625 PF05494 MlaC protein J4H94_RS04635 PF06146 Phosphate-starvation-inducible E J4H94_RS04645 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4H94_RS04650 PF01634 ATP phosphoribosyltransferase J4H94_RS04655 PF00815 Histidinol dehydrogenase J4H94_RS04660 PF00155 Aminotransferase class I and II J4H94_RS04665 PF13180 PDZ domain J4H94_RS04670 PF01784 NIF3 (NGG1p interacting factor 3) J4H94_RS04675 PF01507 Phosphoadenosine phosphosulfate reductase family J4H94_RS04680 PF00009 Elongation factor Tu GTP binding domain J4H94_RS04685 PF00005 ABC transporter J4H94_RS04710 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J4H94_RS04710 PF00437 Type II/IV secretion system protein J4H94_RS04715 PF00482 Type II secretion system (T2SS), protein F J4H94_RS04720 PF06750 Bacterial Peptidase A24 N-terminal domain J4H94_RS04720 PF01478 Type IV leader peptidase family J4H94_RS04725 PF01121 Dephospho-CoA kinase J4H94_RS04730 PF03884 DNA gyrase inhibitor YacG J4H94_RS04745 PF00572 Ribosomal protein L13 J4H94_RS04750 PF00380 Ribosomal protein S9/S16 J4H94_RS04755 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J4H94_RS04755 PF00355 Rieske [2Fe-2S] domain J4H94_RS04760 PF00033 Cytochrome b/b6/petB J4H94_RS04760 PF00032 Cytochrome b(C-terminal)/b6/petD J4H94_RS04765 PF02167 Cytochrome C1 family J4H94_RS04770 PF02798 Glutathione S-transferase, N-terminal domain J4H94_RS04770 PF00043 Glutathione S-transferase, C-terminal domain J4H94_RS04775 PF04386 Stringent starvation protein B J4H94_RS04780 PF04972 BON domain J4H94_RS04785 PF13580 SIS domain J4H94_RS04790 PF02021 Uncharacterised protein family UPF0102 J4H94_RS04795 PF04348 LppC putative lipoprotein J4H94_RS04800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4H94_RS04810 PF02381 MraZ protein, putative antitoxin-like J4H94_RS04815 PF01795 MraW methylase family J4H94_RS04820 PF04999 Cell division protein FtsL J4H94_RS04825 PF00905 Penicillin binding protein transpeptidase domain J4H94_RS04825 PF03717 Penicillin-binding Protein dimerisation domain J4H94_RS04830 PF08245 Mur ligase middle domain J4H94_RS04830 PF02875 Mur ligase family, glutamate ligase domain J4H94_RS04830 PF01225 Mur ligase family, catalytic domain J4H94_RS04835 PF01225 Mur ligase family, catalytic domain J4H94_RS04835 PF02875 Mur ligase family, glutamate ligase domain J4H94_RS04835 PF08245 Mur ligase middle domain J4H94_RS04840 PF00953 Glycosyl transferase family 4 J4H94_RS04840 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 J4H94_RS04845 PF02875 Mur ligase family, glutamate ligase domain J4H94_RS04845 PF08245 Mur ligase middle domain J4H94_RS04850 PF01098 Cell cycle protein J4H94_RS04855 PF03033 Glycosyltransferase family 28 N-terminal domain J4H94_RS04855 PF04101 Glycosyltransferase family 28 C-terminal domain J4H94_RS04860 PF02875 Mur ligase family, glutamate ligase domain J4H94_RS04860 PF08245 Mur ligase middle domain J4H94_RS04860 PF01225 Mur ligase family, catalytic domain J4H94_RS04865 PF07478 D-ala D-ala ligase C-terminus J4H94_RS04865 PF01820 D-ala D-ala ligase N-terminus J4H94_RS04870 PF03799 Cell division protein FtsQ J4H94_RS04870 PF08478 POTRA domain, FtsQ-type J4H94_RS04875 PF02491 SHS2 domain inserted in FTSA J4H94_RS04880 PF12327 FtsZ family, C-terminal domain J4H94_RS04880 PF00091 Tubulin/FtsZ family, GTPase domain J4H94_RS04885 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J4H94_RS04910 PF07995 Glucose / Sorbosone dehydrogenase J4H94_RS04915 PF02308 MgtC family J4H94_RS04935 PF03641 Possible lysine decarboxylase J4H94_RS04940 PF00106 short chain dehydrogenase J4H94_RS04945 PF00916 Sulfate permease family J4H94_RS04945 PF01740 STAS domain J4H94_RS04955 PF06039 Malate:quinone oxidoreductase (Mqo) J4H94_RS04970 PF07044 Protein of unknown function (DUF1329) J4H94_RS05000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS05000 PF02743 Cache domain J4H94_RS05000 PF00672 HAMP domain J4H94_RS05005 PF01435 Peptidase family M48 J4H94_RS05015 PF01169 Uncharacterized protein family UPF0016 J4H94_RS05020 PF05175 Methyltransferase small domain J4H94_RS05020 PF08468 Methyltransferase small domain N-terminal J4H94_RS05025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4H94_RS05025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4H94_RS05030 PF01810 LysE type translocator J4H94_RS05035 PF00501 AMP-binding enzyme J4H94_RS05035 PF13193 AMP-binding enzyme C-terminal domain J4H94_RS05040 PF08448 PAS fold J4H94_RS05040 PF00072 Response regulator receiver domain J4H94_RS05040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS05040 PF13188 PAS domain J4H94_RS05040 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS05045 PF00753 Metallo-beta-lactamase superfamily J4H94_RS05050 PF13488 Glycine zipper J4H94_RS05050 PF00691 OmpA family J4H94_RS05055 PF00072 Response regulator receiver domain J4H94_RS05055 PF09308 LuxQ, periplasmic J4H94_RS05055 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS05055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS05060 PF03707 Bacterial signalling protein N terminal repeat J4H94_RS05060 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS05060 PF00563 EAL domain J4H94_RS05065 PF01553 Acyltransferase J4H94_RS05070 PF01515 Phosphate acetyl/butaryl transferase J4H94_RS05070 PF07085 DRTGG domain J4H94_RS05075 PF00871 Acetokinase family J4H94_RS05080 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4H94_RS05085 PF00255 Glutathione peroxidase J4H94_RS05090 PF16925 Tetracyclin repressor-like, C-terminal domain J4H94_RS05090 PF00440 Bacterial regulatory proteins, tetR family J4H94_RS05095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4H94_RS05095 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4H94_RS05120 PF02152 Dihydroneopterin aldolase J4H94_RS05135 PF00258 Flavodoxin J4H94_RS05140 PF00596 Class II Aldolase and Adducin N-terminal domain J4H94_RS05165 PF13396 Phospholipase_D-nuclease N-terminal J4H94_RS05165 PF13091 PLD-like domain J4H94_RS05170 PF01965 DJ-1/PfpI family J4H94_RS05175 PF09905 DNA-binding protein VF530 J4H94_RS05180 PF05681 Fumarate hydratase (Fumerase) J4H94_RS05180 PF05683 Fumarase C-terminus J4H94_RS05185 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS05190 PF00175 Oxidoreductase NAD-binding domain J4H94_RS05195 PF00224 Pyruvate kinase, barrel domain J4H94_RS05195 PF02887 Pyruvate kinase, alpha/beta domain J4H94_RS05220 PF07726 ATPase family associated with various cellular activities (AAA) J4H94_RS05220 PF17863 AAA lid domain J4H94_RS05275 PF02463 RecF/RecN/SMC N terminal domain J4H94_RS05285 PF03793 PASTA domain J4H94_RS05285 PF00069 Protein kinase domain J4H94_RS05290 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4H94_RS05350 PF00929 Exonuclease J4H94_RS05350 PF08411 Exonuclease C-terminal J4H94_RS05360 PF01842 ACT domain J4H94_RS05360 PF00551 Formyl transferase J4H94_RS05370 PF05872 Bacterial protein of unknown function (DUF853) J4H94_RS05380 PF00483 Nucleotidyl transferase J4H94_RS05380 PF01050 Mannose-6-phosphate isomerase J4H94_RS05385 PF03883 Peroxide stress protein YaaA J4H94_RS05390 PF01545 Cation efflux family J4H94_RS05390 PF16916 Dimerisation domain of Zinc Transporter J4H94_RS05395 PF02562 PhoH-like protein J4H94_RS05395 PF13638 PIN domain J4H94_RS05400 PF01967 MoaC family J4H94_RS05405 PF02597 ThiS family J4H94_RS05410 PF02391 MoaE protein J4H94_RS05420 PF00270 DEAD/DEAH box helicase J4H94_RS05420 PF00271 Helicase conserved C-terminal domain J4H94_RS05425 PF02230 Phospholipase/Carboxylesterase J4H94_RS05430 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4H94_RS05435 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS05440 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS05445 PF00005 ABC transporter J4H94_RS05455 PF02769 AIR synthase related protein, C-terminal domain J4H94_RS05455 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J4H94_RS05455 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J4H94_RS05460 PF01784 NIF3 (NGG1p interacting factor 3) J4H94_RS05465 PF03734 L,D-transpeptidase catalytic domain J4H94_RS05470 PF00293 NUDIX domain J4H94_RS05470 PF09297 NADH pyrophosphatase zinc ribbon domain J4H94_RS05475 PF00293 NUDIX domain J4H94_RS05480 PF00132 Bacterial transferase hexapeptide (six repeats) J4H94_RS05490 PF02222 ATP-grasp domain J4H94_RS05490 PF01370 NAD dependent epimerase/dehydratase family J4H94_RS05495 PF03471 Transporter associated domain J4H94_RS05495 PF01595 Cyclin M transmembrane N-terminal domain J4H94_RS05495 PF00571 CBS domain J4H94_RS05500 PF01578 Cytochrome C assembly protein J4H94_RS05505 PF00448 SRP54-type protein, GTPase domain J4H94_RS05505 PF02881 SRP54-type protein, helical bundle domain J4H94_RS05505 PF02978 Signal peptide binding domain J4H94_RS05510 PF00886 Ribosomal protein S16 J4H94_RS05515 PF05239 PRC-barrel domain J4H94_RS05515 PF01782 RimM N-terminal domain J4H94_RS05520 PF01746 tRNA (Guanine-1)-methyltransferase J4H94_RS05525 PF01245 Ribosomal protein L19 J4H94_RS05530 PF02899 Phage integrase, N-terminal SAM-like domain J4H94_RS05530 PF00589 Phage integrase family J4H94_RS05535 PF10411 Disulfide bond isomerase protein N-terminus J4H94_RS05535 PF13098 Thioredoxin-like domain J4H94_RS05540 PF04828 Glutathione-dependent formaldehyde-activating enzyme J4H94_RS05545 PF01842 ACT domain J4H94_RS05545 PF00742 Homoserine dehydrogenase J4H94_RS05545 PF03447 Homoserine dehydrogenase, NAD binding domain J4H94_RS05550 PF00291 Pyridoxal-phosphate dependent enzyme J4H94_RS05550 PF14821 Threonine synthase N terminus J4H94_RS05555 PF00929 Exonuclease J4H94_RS05560 PF01979 Amidohydrolase family J4H94_RS05570 PF00764 Arginosuccinate synthase J4H94_RS05575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4H94_RS05585 PF00633 Helix-hairpin-helix motif J4H94_RS05585 PF00730 HhH-GPD superfamily base excision DNA repair protein J4H94_RS05585 PF10576 Iron-sulfur binding domain of endonuclease III J4H94_RS05590 PF02508 Rnf-Nqr subunit, membrane protein J4H94_RS05595 PF04205 FMN-binding domain J4H94_RS05600 PF03116 NQR2, RnfD, RnfE family J4H94_RS05605 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J4H94_RS05605 PF12838 4Fe-4S dicluster domain J4H94_RS05605 PF13375 RnfC Barrel sandwich hybrid domain J4H94_RS05605 PF10531 SLBB domain J4H94_RS05610 PF04060 Putative Fe-S cluster J4H94_RS05615 PF02508 Rnf-Nqr subunit, membrane protein J4H94_RS05625 PF00378 Enoyl-CoA hydratase/isomerase J4H94_RS05630 PF13458 Periplasmic binding protein J4H94_RS05635 PF03167 Uracil DNA glycosylase superfamily J4H94_RS05650 PF01571 Aminomethyltransferase folate-binding domain J4H94_RS05655 PF03937 Flavinator of succinate dehydrogenase J4H94_RS05665 PF00890 FAD binding domain J4H94_RS05665 PF02910 Fumarate reductase flavoprotein C-term J4H94_RS05670 PF04542 Sigma-70 region 2 J4H94_RS05670 PF08281 Sigma-70, region 4 J4H94_RS05675 PF03873 Anti sigma-E protein RseA, C-terminal domain J4H94_RS05675 PF03872 Anti sigma-E protein RseA, N-terminal domain J4H94_RS05680 PF03888 MucB/RseB N-terminal domain J4H94_RS05680 PF17188 MucB/RseB C-terminal domain J4H94_RS05690 PF13180 PDZ domain J4H94_RS05695 PF00679 Elongation factor G C-terminus J4H94_RS05695 PF00009 Elongation factor Tu GTP binding domain J4H94_RS05695 PF03144 Elongation factor Tu domain 2 J4H94_RS05695 PF06421 GTP-binding protein LepA C-terminus J4H94_RS05700 PF10502 Signal peptidase, peptidase S26 J4H94_RS05710 PF00035 Double-stranded RNA binding motif J4H94_RS05710 PF14622 Ribonuclease-III-like J4H94_RS05715 PF07650 KH domain J4H94_RS05715 PF01926 50S ribosome-binding GTPase J4H94_RS05720 PF02565 Recombination protein O C terminal J4H94_RS05720 PF11967 Recombination protein O N terminal J4H94_RS05725 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J4H94_RS05735 PF03466 LysR substrate binding domain J4H94_RS05735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS05740 PF08003 Protein of unknown function (DUF1698) J4H94_RS05745 PF13649 Methyltransferase domain J4H94_RS05755 PF00004 ATPase family associated with various cellular activities (AAA) J4H94_RS05755 PF05362 Lon protease (S16) C-terminal proteolytic domain J4H94_RS05755 PF02190 ATP-dependent protease La (LON) substrate-binding domain J4H94_RS05760 PF12833 Helix-turn-helix domain J4H94_RS05765 PF00171 Aldehyde dehydrogenase family J4H94_RS05765 PF01619 Proline dehydrogenase J4H94_RS05765 PF14850 DNA-binding domain of Proline dehydrogenase J4H94_RS05765 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J4H94_RS05770 PF00474 Sodium:solute symporter family J4H94_RS05780 PF00593 TonB dependent receptor J4H94_RS05780 PF07715 TonB-dependent Receptor Plug Domain J4H94_RS05785 PF00474 Sodium:solute symporter family J4H94_RS05795 PF09339 IclR helix-turn-helix domain J4H94_RS05795 PF01614 Bacterial transcriptional regulator J4H94_RS05800 PF01144 Coenzyme A transferase J4H94_RS05805 PF01144 Coenzyme A transferase J4H94_RS05810 PF00108 Thiolase, N-terminal domain J4H94_RS05810 PF02803 Thiolase, C-terminal domain J4H94_RS05815 PF12146 Serine aminopeptidase, S33 J4H94_RS05875 PF05707 Zonular occludens toxin (Zot) J4H94_RS05885 PF02899 Phage integrase, N-terminal SAM-like domain J4H94_RS05885 PF00589 Phage integrase family J4H94_RS05890 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system J4H94_RS05905 PF00849 RNA pseudouridylate synthase J4H94_RS05905 PF01479 S4 domain J4H94_RS05915 PF09334 tRNA synthetases class I (M) J4H94_RS05915 PF01588 Putative tRNA binding domain J4H94_RS05920 PF10609 NUBPL iron-transfer P-loop NTPase J4H94_RS05925 PF00313 'Cold-shock' DNA-binding domain J4H94_RS05930 PF00692 dUTPase J4H94_RS05935 PF03264 NapC/NirT cytochrome c family, N-terminal region J4H94_RS05940 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) J4H94_RS05945 PF01568 Molydopterin dinucleotide binding domain J4H94_RS05945 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4H94_RS05945 PF00384 Molybdopterin oxidoreductase J4H94_RS05955 PF06796 Periplasmic nitrate reductase protein NapE J4H94_RS05960 PF07690 Major Facilitator Superfamily J4H94_RS05965 PF10263 SprT-like family J4H94_RS05965 PF17283 SprT-like zinc ribbon domain J4H94_RS05975 PF04893 Yip1 domain J4H94_RS05985 PF01171 PP-loop family J4H94_RS05990 PF00793 DAHP synthetase I family J4H94_RS06015 PF01654 Cytochrome bd terminal oxidase subunit I J4H94_RS06020 PF02322 Cytochrome bd terminal oxidase subunit II J4H94_RS06025 PF08173 Membrane bound YbgT-like protein J4H94_RS06040 PF00877 NlpC/P60 family J4H94_RS06045 PF00877 NlpC/P60 family J4H94_RS06050 PF03600 Citrate transporter J4H94_RS06060 PF07715 TonB-dependent Receptor Plug Domain J4H94_RS06060 PF00593 TonB dependent receptor J4H94_RS06070 PF12557 Cob(I)alamin adenosyltransferase N terminal J4H94_RS06070 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP J4H94_RS06075 PF07685 CobB/CobQ-like glutamine amidotransferase domain J4H94_RS06075 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4H94_RS06080 PF00881 Nitroreductase family J4H94_RS06090 PF17113 Regulatory signalling modulator protein AmpE J4H94_RS06090 PF03186 CobD/Cbib protein J4H94_RS06095 PF00155 Aminotransferase class I and II J4H94_RS06100 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4H94_RS06100 PF07685 CobB/CobQ-like glutamine amidotransferase domain J4H94_RS06105 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J4H94_RS06110 PF02277 Phosphoribosyltransferase J4H94_RS06120 PF02654 Cobalamin-5-phosphate synthase J4H94_RS06125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS06125 PF03466 LysR substrate binding domain J4H94_RS06130 PF01042 Endoribonuclease L-PSP J4H94_RS06135 PF00005 ABC transporter J4H94_RS06135 PF03459 TOBE domain J4H94_RS06140 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS06150 PF00255 Glutathione peroxidase J4H94_RS06155 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J4H94_RS06160 PF00581 Rhodanese-like domain J4H94_RS06165 PF01612 3'-5' exonuclease J4H94_RS06165 PF00570 HRDC domain J4H94_RS06170 PF05166 YcgL domain J4H94_RS06180 PF03692 Putative zinc- or iron-chelating domain J4H94_RS06190 PF01212 Beta-eliminating lyase J4H94_RS06195 PF02272 DHHA1 domain J4H94_RS06195 PF01411 tRNA synthetases class II (A) J4H94_RS06195 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4H94_RS06200 PF00696 Amino acid kinase family J4H94_RS06200 PF01842 ACT domain J4H94_RS06200 PF13840 ACT domain J4H94_RS06205 PF02599 Global regulator protein family J4H94_RS06230 PF00571 CBS domain J4H94_RS06230 PF01769 Divalent cation transporter J4H94_RS06230 PF03448 MgtE intracellular N domain J4H94_RS06235 PF04277 Oxaloacetate decarboxylase, gamma chain J4H94_RS06240 PF00364 Biotin-requiring enzyme J4H94_RS06240 PF02436 Conserved carboxylase domain J4H94_RS06240 PF00682 HMGL-like J4H94_RS06245 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit J4H94_RS06250 PF03869 Arc-like DNA binding domain J4H94_RS06275 PF07238 PilZ domain J4H94_RS06275 PF07317 Flagellar regulator YcgR J4H94_RS06295 PF01584 CheW-like domain J4H94_RS06295 PF00072 Response regulator receiver domain J4H94_RS06300 PF01739 CheR methyltransferase, SAM binding domain J4H94_RS06300 PF03705 CheR methyltransferase, all-alpha domain J4H94_RS06305 PF00460 Flagella basal body rod protein J4H94_RS06310 PF00460 Flagella basal body rod protein J4H94_RS06310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4H94_RS06315 PF03963 Flagellar hook capping protein - N-terminal region J4H94_RS06315 PF13860 FlgD Ig-like domain J4H94_RS06315 PF13861 FlgD Tudor-like domain J4H94_RS06320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4H94_RS06320 PF07559 Flagellar basal body protein FlaE J4H94_RS06320 PF00460 Flagella basal body rod protein J4H94_RS06325 PF00460 Flagella basal body rod protein J4H94_RS06325 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4H94_RS06330 PF00460 Flagella basal body rod protein J4H94_RS06330 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4H94_RS06335 PF02107 Flagellar L-ring protein J4H94_RS06340 PF02119 Flagellar P-ring protein J4H94_RS06345 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J4H94_RS06345 PF10135 Rod binding protein J4H94_RS06350 PF00460 Flagella basal body rod protein J4H94_RS06350 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4H94_RS06355 PF00700 Bacterial flagellin C-terminal helical region J4H94_RS06355 PF00669 Bacterial flagellin N-terminal helical region J4H94_RS06355 PF00460 Flagella basal body rod protein J4H94_RS06385 PF00563 EAL domain J4H94_RS06385 PF05231 MASE1 J4H94_RS06390 PF11818 C-terminal domain of tail specific protease (DUF3340) J4H94_RS06390 PF00595 PDZ domain J4H94_RS06390 PF03572 Peptidase family S41 J4H94_RS06390 PF17804 Tail specific protease N-terminal domain J4H94_RS06395 PF08240 Alcohol dehydrogenase GroES-like domain J4H94_RS06395 PF00698 Acyl transferase domain J4H94_RS06395 PF14765 Polyketide synthase dehydratase J4H94_RS06395 PF08990 Erythronolide synthase docking J4H94_RS06395 PF00550 Phosphopantetheine attachment site J4H94_RS06395 PF00109 Beta-ketoacyl synthase, N-terminal domain J4H94_RS06395 PF16197 Ketoacyl-synthetase C-terminal extension J4H94_RS06395 PF08659 KR domain J4H94_RS06395 PF09277 Erythronolide synthase, docking J4H94_RS06395 PF02801 Beta-ketoacyl synthase, C-terminal domain J4H94_RS06400 PF02127 Aminopeptidase I zinc metalloprotease (M18) J4H94_RS06405 PF00849 RNA pseudouridylate synthase J4H94_RS06410 PF03776 Septum formation topological specificity factor MinE J4H94_RS06415 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4H94_RS06420 PF05209 Septum formation inhibitor MinC, N-terminal domain J4H94_RS06420 PF03775 Septum formation inhibitor MinC, C-terminal domain J4H94_RS06425 PF03279 Bacterial lipid A biosynthesis acyltransferase J4H94_RS06430 PF02678 Pirin J4H94_RS06430 PF05726 Pirin C-terminal cupin domain J4H94_RS06435 PF04333 MlaA lipoprotein J4H94_RS06450 PF04341 Protein of unknown function, DUF485 J4H94_RS06455 PF00474 Sodium:solute symporter family J4H94_RS06460 PF00561 alpha/beta hydrolase fold J4H94_RS06460 PF00106 short chain dehydrogenase J4H94_RS06475 PF06794 Uncharacterised protein family (UPF0270) J4H94_RS06480 PF00072 Response regulator receiver domain J4H94_RS06480 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS06480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS06480 PF00672 HAMP domain J4H94_RS06480 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4H94_RS06480 PF01627 Hpt domain J4H94_RS06490 PF02875 Mur ligase family, glutamate ligase domain J4H94_RS06490 PF08245 Mur ligase middle domain J4H94_RS06490 PF08443 RimK-like ATP-grasp domain J4H94_RS06495 PF13537 Glutamine amidotransferase domain J4H94_RS06495 PF00733 Asparagine synthase J4H94_RS06505 PF00082 Subtilase family J4H94_RS06515 PF12867 DinB superfamily J4H94_RS06515 PF03781 Sulfatase-modifying factor enzyme 1 J4H94_RS06525 PF00106 short chain dehydrogenase J4H94_RS06535 PF08494 DEAD/H associated J4H94_RS06535 PF00270 DEAD/DEAH box helicase J4H94_RS06535 PF00271 Helicase conserved C-terminal domain J4H94_RS06570 PF07995 Glucose / Sorbosone dehydrogenase J4H94_RS06575 PF01011 PQQ enzyme repeat J4H94_RS06580 PF17783 CvfB-like winged helix domain J4H94_RS06580 PF13509 S1 domain J4H94_RS06595 PF00150 Cellulase (glycosyl hydrolase family 5) J4H94_RS06630 PF07715 TonB-dependent Receptor Plug Domain J4H94_RS06630 PF00593 TonB dependent receptor J4H94_RS06635 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS06635 PF00072 Response regulator receiver domain J4H94_RS06655 PF00550 Phosphopantetheine attachment site J4H94_RS06665 PF03062 MBOAT, membrane-bound O-acyltransferase family J4H94_RS06675 PF00486 Transcriptional regulatory protein, C terminal J4H94_RS06675 PF00072 Response regulator receiver domain J4H94_RS06680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS06680 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS06680 PF18415 Histidine kinase receptor ArcB trans-membrane domain J4H94_RS06680 PF01627 Hpt domain J4H94_RS06680 PF00989 PAS fold J4H94_RS06680 PF00072 Response regulator receiver domain J4H94_RS06700 PF00005 ABC transporter J4H94_RS06700 PF08402 TOBE domain J4H94_RS06705 PF00005 ABC transporter J4H94_RS06710 PF03069 Acetamidase/Formamidase family J4H94_RS06715 PF09723 Zinc ribbon domain J4H94_RS06720 PF00795 Carbon-nitrogen hydrolase J4H94_RS06725 PF07724 AAA domain (Cdc48 subfamily) J4H94_RS06725 PF10431 C-terminal, D2-small domain, of ClpB protein J4H94_RS06730 PF03631 Virulence factor BrkB J4H94_RS06735 PF13439 Glycosyltransferase Family 4 J4H94_RS06735 PF00534 Glycosyl transferases group 1 J4H94_RS06755 PF11953 Domain of unknown function (DUF3470) J4H94_RS06755 PF00037 4Fe-4S binding domain J4H94_RS06760 PF00488 MutS domain V J4H94_RS06760 PF05190 MutS family domain IV J4H94_RS06760 PF05192 MutS domain III J4H94_RS06760 PF01624 MutS domain I J4H94_RS06760 PF05188 MutS domain II J4H94_RS06765 PF12167 Arm DNA-binding domain J4H94_RS06765 PF00589 Phage integrase family J4H94_RS06790 PF00753 Metallo-beta-lactamase superfamily J4H94_RS06795 PF08659 KR domain J4H94_RS06795 PF14765 Polyketide synthase dehydratase J4H94_RS06795 PF00698 Acyl transferase domain J4H94_RS06795 PF08240 Alcohol dehydrogenase GroES-like domain J4H94_RS06795 PF00107 Zinc-binding dehydrogenase J4H94_RS06795 PF16197 Ketoacyl-synthetase C-terminal extension J4H94_RS06795 PF00109 Beta-ketoacyl synthase, N-terminal domain J4H94_RS06795 PF02801 Beta-ketoacyl synthase, C-terminal domain J4H94_RS06795 PF00550 Phosphopantetheine attachment site J4H94_RS06800 PF03466 LysR substrate binding domain J4H94_RS06800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS06825 PF03561 Allantoicase repeat J4H94_RS06835 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS06840 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS06845 PF09347 Domain of unknown function (DUF1989) J4H94_RS06855 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4H94_RS06875 PF00196 Bacterial regulatory proteins, luxR family J4H94_RS06875 PF00072 Response regulator receiver domain J4H94_RS06880 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS06880 PF09456 RcsC Alpha-Beta-Loop (ABL) J4H94_RS06880 PF00072 Response regulator receiver domain J4H94_RS06880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS06885 PF10609 NUBPL iron-transfer P-loop NTPase J4H94_RS06890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS06890 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS06895 PF00072 Response regulator receiver domain J4H94_RS06905 PF02796 Helix-turn-helix domain of resolvase J4H94_RS06905 PF00239 Resolvase, N terminal domain J4H94_RS06910 PF13148 Protein of unknown function (DUF3987) J4H94_RS06920 PF02464 Competence-damaged protein J4H94_RS06925 PF00154 recA bacterial DNA recombination protein J4H94_RS06930 PF02631 RecX family J4H94_RS06940 PF00753 Metallo-beta-lactamase superfamily J4H94_RS06940 PF10996 Beta-Casp domain J4H94_RS06940 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J4H94_RS06945 PF09364 XFP N-terminal domain J4H94_RS06945 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase J4H94_RS06945 PF09363 XFP C-terminal domain J4H94_RS06955 PF03942 DTW domain J4H94_RS06960 PF00892 EamA-like transporter family J4H94_RS06965 PF00072 Response regulator receiver domain J4H94_RS06965 PF00196 Bacterial regulatory proteins, luxR family J4H94_RS06970 PF03466 LysR substrate binding domain J4H94_RS06970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS06975 PF00970 Oxidoreductase FAD-binding domain J4H94_RS06975 PF00175 Oxidoreductase NAD-binding domain J4H94_RS06980 PF02810 SEC-C motif J4H94_RS07000 PF06733 DEAD_2 J4H94_RS07000 PF13307 Helicase C-terminal domain J4H94_RS07005 PF00144 Beta-lactamase J4H94_RS07010 PF00691 OmpA family J4H94_RS07010 PF04972 BON domain J4H94_RS07015 PF01243 Pyridoxamine 5'-phosphate oxidase J4H94_RS07015 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J4H94_RS07025 PF05433 Glycine zipper 2TM domain J4H94_RS07030 PF00361 Proton-conducting membrane transporter J4H94_RS07030 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J4H94_RS07030 PF13244 Domain of unknown function (DUF4040) J4H94_RS07030 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J4H94_RS07035 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J4H94_RS07040 PF00361 Proton-conducting membrane transporter J4H94_RS07050 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J4H94_RS07055 PF03334 Na+/H+ antiporter subunit J4H94_RS07060 PF01909 Nucleotidyltransferase domain J4H94_RS07060 PF01966 HD domain J4H94_RS07060 PF08335 GlnD PII-uridylyltransferase J4H94_RS07060 PF01842 ACT domain J4H94_RS07065 PF00557 Metallopeptidase family M24 J4H94_RS07070 PF00318 Ribosomal protein S2 J4H94_RS07075 PF00889 Elongation factor TS J4H94_RS07080 PF00696 Amino acid kinase family J4H94_RS07085 PF01765 Ribosome recycling factor J4H94_RS07090 PF01255 Putative undecaprenyl diphosphate synthase J4H94_RS07100 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J4H94_RS07100 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J4H94_RS07100 PF13288 DXP reductoisomerase C-terminal domain J4H94_RS07105 PF13180 PDZ domain J4H94_RS07105 PF17820 PDZ domain J4H94_RS07105 PF02163 Peptidase family M50 J4H94_RS07110 PF01103 Surface antigen J4H94_RS07110 PF07244 Surface antigen variable number repeat J4H94_RS07115 PF03938 Outer membrane protein (OmpH-like) J4H94_RS07120 PF00132 Bacterial transferase hexapeptide (six repeats) J4H94_RS07120 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J4H94_RS07125 PF07977 FabA-like domain J4H94_RS07130 PF00132 Bacterial transferase hexapeptide (six repeats) J4H94_RS07130 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J4H94_RS07135 PF02684 Lipid-A-disaccharide synthetase J4H94_RS07140 PF01351 Ribonuclease HII J4H94_RS07145 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4H94_RS07145 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4H94_RS07145 PF14579 Helix-hairpin-helix motif J4H94_RS07145 PF02811 PHP domain J4H94_RS07145 PF01336 OB-fold nucleic acid binding domain J4H94_RS07150 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J4H94_RS07155 PF01171 PP-loop family J4H94_RS07155 PF09179 TilS substrate binding domain J4H94_RS07155 PF11734 TilS substrate C-terminal domain J4H94_RS07160 PF06418 CTP synthase N-terminus J4H94_RS07160 PF00117 Glutamine amidotransferase class-I J4H94_RS07165 PF00793 DAHP synthetase I family J4H94_RS07170 PF03952 Enolase, N-terminal domain J4H94_RS07170 PF00113 Enolase, C-terminal TIM barrel domain J4H94_RS07175 PF04977 Septum formation initiator J4H94_RS07180 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J4H94_RS07195 PF03466 LysR substrate binding domain J4H94_RS07195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS07200 PF08240 Alcohol dehydrogenase GroES-like domain J4H94_RS07200 PF00107 Zinc-binding dehydrogenase J4H94_RS07205 PF00756 Putative esterase J4H94_RS07210 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4H94_RS07220 PF02542 YgbB family J4H94_RS07225 PF01142 tRNA pseudouridine synthase D (TruD) J4H94_RS07230 PF01975 Survival protein SurE J4H94_RS07245 PF01476 LysM domain J4H94_RS07245 PF01551 Peptidase family M23 J4H94_RS07250 PF00140 Sigma-70 factor, region 1.2 J4H94_RS07250 PF04542 Sigma-70 region 2 J4H94_RS07250 PF04539 Sigma-70 region 3 J4H94_RS07250 PF04545 Sigma-70, region 4 J4H94_RS07265 PF00474 Sodium:solute symporter family J4H94_RS07280 PF01725 Ham1 family J4H94_RS07290 PF00582 Universal stress protein family J4H94_RS07295 PF01844 HNH endonuclease J4H94_RS07300 PF01709 Transcriptional regulator J4H94_RS07305 PF00892 EamA-like transporter family J4H94_RS07315 PF03475 3-alpha domain J4H94_RS07315 PF03473 MOSC domain J4H94_RS07325 PF01966 HD domain J4H94_RS07325 PF13286 Phosphohydrolase-associated domain J4H94_RS07330 PF00909 Ammonium Transporter Family J4H94_RS07335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4H94_RS07350 PF00459 Inositol monophosphatase family J4H94_RS07375 PF05698 Bacterial trigger factor protein (TF) C-terminus J4H94_RS07390 PF01266 FAD dependent oxidoreductase J4H94_RS07390 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J4H94_RS07395 PF00455 DeoR C terminal sensor domain J4H94_RS07395 PF08220 DeoR-like helix-turn-helix domain J4H94_RS07400 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J4H94_RS07400 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J4H94_RS07405 PF00230 Major intrinsic protein J4H94_RS07425 PF07885 Ion channel J4H94_RS07440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS07440 PF00672 HAMP domain J4H94_RS07440 PF17200 Single Cache domain 2 J4H94_RS07445 PF01136 Peptidase family U32 J4H94_RS07445 PF12392 Collagenase J4H94_RS07450 PF13411 MerR HTH family regulatory protein J4H94_RS07475 PF13411 MerR HTH family regulatory protein J4H94_RS07500 PF00141 Peroxidase J4H94_RS07505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS07505 PF03466 LysR substrate binding domain J4H94_RS07510 PF02525 Flavodoxin-like fold J4H94_RS07515 PF08447 PAS fold J4H94_RS07515 PF13426 PAS domain J4H94_RS07515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS07535 PF13649 Methyltransferase domain J4H94_RS07545 PF04993 TfoX N-terminal domain J4H94_RS07550 PF02525 Flavodoxin-like fold J4H94_RS07555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS07555 PF03466 LysR substrate binding domain J4H94_RS07580 PF00268 Ribonucleotide reductase, small chain J4H94_RS07585 PF00317 Ribonucleotide reductase, all-alpha domain J4H94_RS07585 PF03477 ATP cone domain J4H94_RS07585 PF02867 Ribonucleotide reductase, barrel domain J4H94_RS07590 PF00072 Response regulator receiver domain J4H94_RS07590 PF00486 Transcriptional regulatory protein, C terminal J4H94_RS07595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS07595 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS07595 PF00672 HAMP domain J4H94_RS07600 PF02770 Acyl-CoA dehydrogenase, middle domain J4H94_RS07600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4H94_RS07600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4H94_RS07600 PF09317 Domain of unknown function (DUF1974) J4H94_RS07605 PF00924 Mechanosensitive ion channel J4H94_RS07610 PF00581 Rhodanese-like domain J4H94_RS07635 PF11871 Domain of unknown function (DUF3391) J4H94_RS07635 PF01966 HD domain J4H94_RS07645 PF00202 Aminotransferase class-III J4H94_RS07655 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family J4H94_RS07660 PF00005 ABC transporter J4H94_RS07665 PF01061 ABC-2 type transporter J4H94_RS07670 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J4H94_RS07670 PF14489 QueF-like protein J4H94_RS07680 PF04333 MlaA lipoprotein J4H94_RS07690 PF00072 Response regulator receiver domain J4H94_RS07700 PF00923 Transaldolase/Fructose-6-phosphate aldolase J4H94_RS07705 PF01207 Dihydrouridine synthase (Dus) J4H94_RS07710 PF09587 Bacterial capsule synthesis protein PGA_cap J4H94_RS07720 PF00857 Isochorismatase family J4H94_RS07725 PF14525 AraC-binding-like domain J4H94_RS07725 PF12833 Helix-turn-helix domain J4H94_RS07730 PF00848 Ring hydroxylating alpha subunit (catalytic domain) J4H94_RS07730 PF00355 Rieske [2Fe-2S] domain J4H94_RS07735 PF00866 Ring hydroxylating beta subunit J4H94_RS07740 PF00970 Oxidoreductase FAD-binding domain J4H94_RS07740 PF00111 2Fe-2S iron-sulfur cluster binding domain J4H94_RS07740 PF00175 Oxidoreductase NAD-binding domain J4H94_RS07745 PF00106 short chain dehydrogenase J4H94_RS07750 PF07690 Major Facilitator Superfamily J4H94_RS07755 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J4H94_RS07755 PF13378 Enolase C-terminal domain-like J4H94_RS07760 PF02426 Muconolactone delta-isomerase J4H94_RS07765 PF00775 Dioxygenase J4H94_RS07765 PF04444 Catechol dioxygenase N terminus J4H94_RS07770 PF03594 Benzoate membrane transport protein J4H94_RS07775 PF03573 outer membrane porin, OprD family J4H94_RS07810 PF00206 Lyase J4H94_RS07810 PF10415 Fumarase C C-terminus J4H94_RS07820 PF01722 BolA-like protein J4H94_RS07825 PF17773 UPF0176 acylphosphatase like domain J4H94_RS07825 PF00581 Rhodanese-like domain J4H94_RS07835 PF00664 ABC transporter transmembrane region J4H94_RS07835 PF00005 ABC transporter J4H94_RS07840 PF00672 HAMP domain J4H94_RS07840 PF16591 Helical bimodular sensor domain J4H94_RS07840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS07850 PF00472 RF-1 domain J4H94_RS07860 PF10011 Predicted membrane protein (DUF2254) J4H94_RS07865 PF03466 LysR substrate binding domain J4H94_RS07865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS07875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4H94_RS07875 PF02770 Acyl-CoA dehydrogenase, middle domain J4H94_RS07875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4H94_RS07880 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4H94_RS07885 PF03972 MmgE/PrpD family J4H94_RS07890 PF02515 CoA-transferase family III J4H94_RS07895 PF03328 HpcH/HpaI aldolase/citrate lyase family J4H94_RS07900 PF03480 Bacterial extracellular solute-binding protein, family 7 J4H94_RS07905 PF00561 alpha/beta hydrolase fold J4H94_RS07925 PF00682 HMGL-like J4H94_RS07930 PF02515 CoA-transferase family III J4H94_RS07935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS07935 PF03466 LysR substrate binding domain J4H94_RS07940 PF03480 Bacterial extracellular solute-binding protein, family 7 J4H94_RS07945 PF10011 Predicted membrane protein (DUF2254) J4H94_RS07950 PF16177 Acetyl-coenzyme A synthetase N-terminus J4H94_RS07950 PF00501 AMP-binding enzyme J4H94_RS07950 PF13193 AMP-binding enzyme C-terminal domain J4H94_RS07960 PF00326 Prolyl oligopeptidase family J4H94_RS07960 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J4H94_RS07965 PF00378 Enoyl-CoA hydratase/isomerase J4H94_RS07965 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4H94_RS07965 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4H94_RS07970 PF02803 Thiolase, C-terminal domain J4H94_RS07970 PF00108 Thiolase, N-terminal domain J4H94_RS07980 PF01396 Topoisomerase DNA binding C4 zinc finger J4H94_RS07980 PF01131 DNA topoisomerase J4H94_RS07980 PF08272 Topoisomerase I zinc-ribbon-like J4H94_RS07980 PF01751 Toprim domain J4H94_RS07990 PF00892 EamA-like transporter family J4H94_RS08000 PF03846 Cell division inhibitor SulA J4H94_RS08005 PF00717 Peptidase S24-like J4H94_RS08005 PF01726 LexA DNA binding domain J4H94_RS08010 PF00440 Bacterial regulatory proteins, tetR family J4H94_RS08020 PF00933 Glycosyl hydrolase family 3 N terminal domain J4H94_RS08025 PF01048 Phosphorylase superfamily J4H94_RS08035 PF07517 SecA DEAD-like domain J4H94_RS08035 PF02810 SEC-C motif J4H94_RS08035 PF01043 SecA preprotein cross-linking domain J4H94_RS08035 PF07516 SecA Wing and Scaffold domain J4H94_RS08045 PF01804 Penicillin amidase J4H94_RS08050 PF01980 tRNA-methyltransferase O J4H94_RS08050 PF18389 TrmO C-terminal domain J4H94_RS08055 PF00291 Pyridoxal-phosphate dependent enzyme J4H94_RS08060 PF02028 BCCT, betaine/carnitine/choline family transporter J4H94_RS08065 PF00171 Aldehyde dehydrogenase family J4H94_RS08070 PF05199 GMC oxidoreductase J4H94_RS08070 PF00732 GMC oxidoreductase J4H94_RS08075 PF04055 Radical SAM superfamily J4H94_RS08075 PF18693 TRAM domain J4H94_RS08075 PF00919 Uncharacterized protein family UPF0004 J4H94_RS08105 PF00263 Bacterial type II and III secretion system protein J4H94_RS08105 PF13629 Pilus formation protein N terminal region J4H94_RS08105 PF04972 BON domain J4H94_RS08135 PF00437 Type II/IV secretion system protein J4H94_RS08175 PF13439 Glycosyltransferase Family 4 J4H94_RS08175 PF00534 Glycosyl transferases group 1 J4H94_RS08185 PF00534 Glycosyl transferases group 1 J4H94_RS08185 PF13439 Glycosyltransferase Family 4 J4H94_RS08200 PF13439 Glycosyltransferase Family 4 J4H94_RS08200 PF00534 Glycosyl transferases group 1 J4H94_RS08205 PF02357 Transcription termination factor nusG J4H94_RS08215 PF13614 AAA domain J4H94_RS08215 PF02706 Chain length determinant protein J4H94_RS08215 PF13807 G-rich domain on putative tyrosine kinase J4H94_RS08220 PF00535 Glycosyl transferase family 2 J4H94_RS08230 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4H94_RS08265 PF01207 Dihydrouridine synthase (Dus) J4H94_RS08275 PF00011 Hsp20/alpha crystallin family J4H94_RS08280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS08285 PF00330 Aconitase family (aconitate hydratase) J4H94_RS08290 PF00694 Aconitase C-terminal domain J4H94_RS08295 PF00180 Isocitrate/isopropylmalate dehydrogenase J4H94_RS08300 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4H94_RS08300 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4H94_RS08305 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4H94_RS08305 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4H94_RS08315 PF01416 tRNA pseudouridine synthase J4H94_RS08320 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J4H94_RS08325 PF01039 Carboxyl transferase domain J4H94_RS08325 PF17848 Acetyl-coA carboxylase zinc finger domain J4H94_RS08330 PF08245 Mur ligase middle domain J4H94_RS08330 PF02875 Mur ligase family, glutamate ligase domain J4H94_RS08335 PF05036 Sporulation related domain J4H94_RS08340 PF02674 Colicin V production protein J4H94_RS08345 PF00156 Phosphoribosyl transferase domain J4H94_RS08350 PF01053 Cys/Met metabolism PLP-dependent enzyme J4H94_RS08355 PF03958 Bacterial type II/III secretion system short domain J4H94_RS08355 PF00263 Bacterial type II and III secretion system protein J4H94_RS08360 PF11356 Type II secretion system protein C J4H94_RS08395 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J4H94_RS08395 PF01568 Molydopterin dinucleotide binding domain J4H94_RS08395 PF00384 Molybdopterin oxidoreductase J4H94_RS08395 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4H94_RS08395 PF12838 4Fe-4S dicluster domain J4H94_RS08405 PF00037 4Fe-4S binding domain J4H94_RS08405 PF13247 4Fe-4S dicluster domain J4H94_RS08440 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J4H94_RS08440 PF06481 COX Aromatic Rich Motif J4H94_RS08445 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4H94_RS08450 PF00510 Cytochrome c oxidase subunit III J4H94_RS08480 PF01292 Prokaryotic cytochrome b561 J4H94_RS08485 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS08485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS08490 PF00486 Transcriptional regulatory protein, C terminal J4H94_RS08490 PF00072 Response regulator receiver domain J4H94_RS08510 PF00501 AMP-binding enzyme J4H94_RS08535 PF00884 Sulfatase J4H94_RS08540 PF00486 Transcriptional regulatory protein, C terminal J4H94_RS08540 PF00072 Response regulator receiver domain J4H94_RS08545 PF08521 Two-component sensor kinase N-terminal J4H94_RS08545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS08545 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS08560 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS08560 PF03707 Bacterial signalling protein N terminal repeat J4H94_RS08560 PF00563 EAL domain J4H94_RS08570 PF01447 Thermolysin metallopeptidase, catalytic domain J4H94_RS08570 PF02868 Thermolysin metallopeptidase, alpha-helical domain J4H94_RS08570 PF16485 Protealysin propeptide J4H94_RS08575 PF01654 Cytochrome bd terminal oxidase subunit I J4H94_RS08580 PF02322 Cytochrome bd terminal oxidase subunit II J4H94_RS08590 PF12833 Helix-turn-helix domain J4H94_RS08590 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J4H94_RS08600 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4H94_RS08600 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4H94_RS08625 PF01554 MatE J4H94_RS08630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4H94_RS08630 PF11890 Domain of unknown function (DUF3410) J4H94_RS08630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4H94_RS08635 PF12169 DNA polymerase III subunits gamma and tau domain III J4H94_RS08635 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J4H94_RS08635 PF12170 DNA polymerase III tau subunit V interacting with alpha J4H94_RS08640 PF02575 YbaB/EbfC DNA-binding family J4H94_RS08645 PF02132 RecR protein J4H94_RS08645 PF13662 Toprim domain J4H94_RS08655 PF00005 ABC transporter J4H94_RS08660 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS08670 PF02630 SCO1/SenC J4H94_RS08675 PF00156 Phosphoribosyl transferase domain J4H94_RS08680 PF00027 Cyclic nucleotide-binding domain J4H94_RS08680 PF00325 Bacterial regulatory proteins, crp family J4H94_RS08685 PF06969 HemN C-terminal domain J4H94_RS08685 PF04055 Radical SAM superfamily J4H94_RS08690 PF02540 NAD synthase J4H94_RS08705 PF00403 Heavy-metal-associated domain J4H94_RS08715 PF13746 4Fe-4S dicluster domain J4H94_RS08715 PF12801 4Fe-4S binding domain J4H94_RS08715 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase J4H94_RS08720 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4H94_RS08720 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP J4H94_RS08735 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4H94_RS08740 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4H94_RS08740 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP J4H94_RS08750 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4H94_RS08760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS08760 PF08447 PAS fold J4H94_RS08765 PF00330 Aconitase family (aconitate hydratase) J4H94_RS08765 PF00694 Aconitase C-terminal domain J4H94_RS08770 PF18125 RlmM ferredoxin-like domain J4H94_RS08770 PF01728 FtsJ-like methyltransferase J4H94_RS08775 PF01206 Sulfurtransferase TusA J4H94_RS08790 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4H94_RS08795 PF00034 Cytochrome c J4H94_RS08795 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J4H94_RS08795 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J4H94_RS08810 PF00520 Ion transport protein J4H94_RS08810 PF00027 Cyclic nucleotide-binding domain J4H94_RS08815 PF06463 Molybdenum Cofactor Synthesis C J4H94_RS08815 PF04055 Radical SAM superfamily J4H94_RS08820 PF06470 SMC proteins Flexible Hinge Domain J4H94_RS08820 PF02463 RecF/RecN/SMC N terminal domain J4H94_RS08825 PF04354 ZipA, C-terminal FtsZ-binding domain J4H94_RS08830 PF12826 Helix-hairpin-helix motif J4H94_RS08830 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J4H94_RS08830 PF03120 NAD-dependent DNA ligase OB-fold domain J4H94_RS08830 PF01653 NAD-dependent DNA ligase adenylation domain J4H94_RS08830 PF00533 BRCA1 C Terminus (BRCT) domain J4H94_RS08845 PF02465 Flagellar hook-associated protein 2 N-terminus J4H94_RS08845 PF07196 Flagellin hook IN motif J4H94_RS08845 PF07195 Flagellar hook-associated protein 2 C-terminus J4H94_RS08850 PF02561 Flagellar protein FliS J4H94_RS08855 PF06865 Pyrimidine/purine nucleoside phosphorylase J4H94_RS08865 PF00285 Citrate synthase, C-terminal domain J4H94_RS08870 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J4H94_RS08875 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J4H94_RS08880 PF02910 Fumarate reductase flavoprotein C-term J4H94_RS08880 PF00890 FAD binding domain J4H94_RS08885 PF13085 2Fe-2S iron-sulfur cluster binding domain J4H94_RS08890 PF00676 Dehydrogenase E1 component J4H94_RS08890 PF16078 2-oxoglutarate dehydrogenase N-terminus J4H94_RS08890 PF02779 Transketolase, pyrimidine binding domain J4H94_RS08890 PF16870 2-oxoglutarate dehydrogenase C-terminal J4H94_RS08895 PF02817 e3 binding domain J4H94_RS08895 PF00364 Biotin-requiring enzyme J4H94_RS08895 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4H94_RS08900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4H94_RS08900 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4H94_RS08905 PF00549 CoA-ligase J4H94_RS08905 PF08442 ATP-grasp domain J4H94_RS08910 PF00549 CoA-ligase J4H94_RS08910 PF02629 CoA binding domain J4H94_RS08920 PF05525 Branched-chain amino acid transport protein J4H94_RS08945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS08945 PF00183 Hsp90 protein J4H94_RS08970 PF12729 Four helix bundle sensory module for signal transduction J4H94_RS08970 PF00672 HAMP domain J4H94_RS08970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS08975 PF00375 Sodium:dicarboxylate symporter family J4H94_RS08980 PF02801 Beta-ketoacyl synthase, C-terminal domain J4H94_RS08980 PF00109 Beta-ketoacyl synthase, N-terminal domain J4H94_RS08985 PF07977 FabA-like domain J4H94_RS08990 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J4H94_RS08990 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J4H94_RS09005 PF03061 Thioesterase superfamily J4H94_RS09025 PF01594 AI-2E family transporter J4H94_RS09030 PF01734 Patatin-like phospholipase J4H94_RS09035 PF00586 AIR synthase related protein, N-terminal domain J4H94_RS09035 PF02769 AIR synthase related protein, C-terminal domain J4H94_RS09050 PF17863 AAA lid domain J4H94_RS09050 PF07726 ATPase family associated with various cellular activities (AAA) J4H94_RS09060 PF11992 Domain of unknown function (DUF3488) J4H94_RS09060 PF13559 Domain of unknown function (DUF4129) J4H94_RS09060 PF01841 Transglutaminase-like superfamily J4H94_RS09080 PF09335 SNARE associated Golgi protein J4H94_RS09090 PF00106 short chain dehydrogenase J4H94_RS09095 PF02803 Thiolase, C-terminal domain J4H94_RS09095 PF00108 Thiolase, N-terminal domain J4H94_RS09100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4H94_RS09100 PF02770 Acyl-CoA dehydrogenase, middle domain J4H94_RS09100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4H94_RS09105 PF00501 AMP-binding enzyme J4H94_RS09105 PF13193 AMP-binding enzyme C-terminal domain J4H94_RS09110 PF02515 CoA-transferase family III J4H94_RS09120 PF02770 Acyl-CoA dehydrogenase, middle domain J4H94_RS09120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4H94_RS09120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4H94_RS09125 PF00378 Enoyl-CoA hydratase/isomerase J4H94_RS09130 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4H94_RS09130 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4H94_RS09135 PF00378 Enoyl-CoA hydratase/isomerase J4H94_RS09140 PF00171 Aldehyde dehydrogenase family J4H94_RS09155 PF11897 Protein of unknown function (DUF3417) J4H94_RS09155 PF00343 Carbohydrate phosphorylase J4H94_RS09185 PF08239 Bacterial SH3 domain J4H94_RS09190 PF00072 Response regulator receiver domain J4H94_RS09190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS09190 PF13426 PAS domain J4H94_RS09195 PF02386 Cation transport protein J4H94_RS09210 PF00384 Molybdopterin oxidoreductase J4H94_RS09210 PF01568 Molydopterin dinucleotide binding domain J4H94_RS09215 PF02634 FdhD/NarQ family J4H94_RS09220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS09220 PF03466 LysR substrate binding domain J4H94_RS09225 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J4H94_RS09225 PF12833 Helix-turn-helix domain J4H94_RS09230 PF00563 EAL domain J4H94_RS09230 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS09230 PF05231 MASE1 J4H94_RS09230 PF08447 PAS fold J4H94_RS09230 PF08448 PAS fold J4H94_RS09230 PF13426 PAS domain J4H94_RS09240 PF02333 Phytase J4H94_RS09245 PF01618 MotA/TolQ/ExbB proton channel family J4H94_RS09250 PF02472 Biopolymer transport protein ExbD/TolR J4H94_RS09265 PF12462 DNA helicase IV / RNA helicase N terminal J4H94_RS09265 PF00580 UvrD/REP helicase N-terminal domain J4H94_RS09265 PF13361 UvrD-like helicase C-terminal domain J4H94_RS09270 PF00069 Protein kinase domain J4H94_RS09280 PF13806 Rieske-like [2Fe-2S] domain J4H94_RS09280 PF18267 Rubredoxin NAD+ reductase C-terminal domain J4H94_RS09280 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4H94_RS09280 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4H94_RS09280 PF04324 BFD-like [2Fe-2S] binding domain J4H94_RS09280 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4H94_RS09285 PF18267 Rubredoxin NAD+ reductase C-terminal domain J4H94_RS09285 PF13806 Rieske-like [2Fe-2S] domain J4H94_RS09285 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4H94_RS09285 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4H94_RS09285 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4H94_RS09285 PF04324 BFD-like [2Fe-2S] binding domain J4H94_RS09290 PF02146 Sir2 family J4H94_RS09295 PF04055 Radical SAM superfamily J4H94_RS09295 PF06969 HemN C-terminal domain J4H94_RS09300 PF12729 Four helix bundle sensory module for signal transduction J4H94_RS09300 PF00672 HAMP domain J4H94_RS09300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS09320 PF00106 short chain dehydrogenase J4H94_RS09330 PF00875 DNA photolyase J4H94_RS09330 PF03441 FAD binding domain of DNA photolyase J4H94_RS09335 PF13411 MerR HTH family regulatory protein J4H94_RS09340 PF08349 Protein of unknown function (DUF1722) J4H94_RS09345 PF01370 NAD dependent epimerase/dehydratase family J4H94_RS09345 PF08338 Domain of unknown function (DUF1731) J4H94_RS09350 PF00762 Ferrochelatase J4H94_RS09355 PF03707 Bacterial signalling protein N terminal repeat J4H94_RS09355 PF00563 EAL domain J4H94_RS09355 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS09355 PF13188 PAS domain J4H94_RS09360 PF13426 PAS domain J4H94_RS09360 PF01740 STAS domain J4H94_RS09380 PF02152 Dihydroneopterin aldolase J4H94_RS09385 PF01227 GTP cyclohydrolase I J4H94_RS09400 PF13411 MerR HTH family regulatory protein J4H94_RS09420 PF09456 RcsC Alpha-Beta-Loop (ABL) J4H94_RS09420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS09420 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS09420 PF00072 Response regulator receiver domain J4H94_RS09425 PF13409 Glutathione S-transferase, N-terminal domain J4H94_RS09430 PF00591 Glycosyl transferase family, a/b domain J4H94_RS09430 PF02885 Glycosyl transferase family, helical bundle domain J4H94_RS09435 PF04358 DsrC like protein J4H94_RS09445 PF02635 DsrE/DsrF-like family J4H94_RS09450 PF02635 DsrE/DsrF-like family J4H94_RS09460 PF01027 Inhibitor of apoptosis-promoting Bax1 J4H94_RS09475 PF00440 Bacterial regulatory proteins, tetR family J4H94_RS09475 PF08361 MAATS-type transcriptional repressor, C-terminal region J4H94_RS09485 PF00120 Glutamine synthetase, catalytic domain J4H94_RS09490 PF00561 alpha/beta hydrolase fold J4H94_RS09495 PF00005 ABC transporter J4H94_RS09500 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS09510 PF00857 Isochorismatase family J4H94_RS09515 PF02633 Creatinine amidohydrolase J4H94_RS09540 PF09084 NMT1/THI5 like J4H94_RS09545 PF00924 Mechanosensitive ion channel J4H94_RS09550 PF01425 Amidase J4H94_RS09555 PF02785 Biotin carboxylase C-terminal domain J4H94_RS09555 PF00289 Biotin carboxylase, N-terminal domain J4H94_RS09555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4H94_RS09565 PF09347 Domain of unknown function (DUF1989) J4H94_RS09570 PF00005 ABC transporter J4H94_RS09570 PF08402 TOBE domain J4H94_RS09580 PF00672 HAMP domain J4H94_RS09580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS09580 PF12729 Four helix bundle sensory module for signal transduction J4H94_RS09585 PF01026 TatD related DNase J4H94_RS09590 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4H94_RS09590 PF01464 Transglycosylase SLT domain J4H94_RS09595 PF03280 Proteobacterial lipase chaperone protein J4H94_RS09600 PF00561 alpha/beta hydrolase fold J4H94_RS09605 PF01272 Transcription elongation factor, GreA/GreB, C-term J4H94_RS09605 PF03449 Transcription elongation factor, N-terminal J4H94_RS09615 PF00005 ABC transporter J4H94_RS09620 PF13472 GDSL-like Lipase/Acylhydrolase family J4H94_RS09630 PF17969 L,D-transpeptidase C-terminal domain J4H94_RS09630 PF03734 L,D-transpeptidase catalytic domain J4H94_RS09635 PF11839 Alanine-zipper, major outer membrane lipoprotein J4H94_RS09645 PF00793 DAHP synthetase I family J4H94_RS09650 PF08546 Ketopantoate reductase PanE/ApbA C terminal J4H94_RS09650 PF02558 Ketopantoate reductase PanE/ApbA J4H94_RS09655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS09655 PF03466 LysR substrate binding domain J4H94_RS09660 PF01507 Phosphoadenosine phosphosulfate reductase family J4H94_RS09670 PF04715 Anthranilate synthase component I, N terminal region J4H94_RS09670 PF00425 chorismate binding enzyme J4H94_RS09690 PF00392 Bacterial regulatory proteins, gntR family J4H94_RS09690 PF07729 FCD domain J4H94_RS09700 PF00285 Citrate synthase, C-terminal domain J4H94_RS09705 PF00330 Aconitase family (aconitate hydratase) J4H94_RS09705 PF00694 Aconitase C-terminal domain J4H94_RS09710 PF04303 PrpF protein J4H94_RS09715 PF03618 Kinase/pyrophosphorylase J4H94_RS09720 PF00391 PEP-utilising enzyme, mobile domain J4H94_RS09720 PF02896 PEP-utilising enzyme, TIM barrel domain J4H94_RS09720 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J4H94_RS09725 PF03737 Aldolase/RraA J4H94_RS09730 PF01544 CorA-like Mg2+ transporter protein J4H94_RS09740 PF05552 Conserved TM helix J4H94_RS09750 PF00691 OmpA family J4H94_RS09750 PF05736 OprF membrane domain J4H94_RS09755 PF11791 Aconitate B N-terminal domain J4H94_RS09755 PF00330 Aconitase family (aconitate hydratase) J4H94_RS09755 PF06434 Aconitate hydratase 2 N-terminus J4H94_RS09770 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) J4H94_RS09775 PF00149 Calcineurin-like phosphoesterase J4H94_RS09780 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J4H94_RS09785 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4H94_RS09785 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J4H94_RS09790 PF09190 DALR domain J4H94_RS09790 PF01406 tRNA synthetases class I (C) catalytic domain J4H94_RS09795 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J4H94_RS09795 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J4H94_RS09825 PF00072 Response regulator receiver domain J4H94_RS09825 PF13426 PAS domain J4H94_RS09825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS09830 PF07729 FCD domain J4H94_RS09830 PF00392 Bacterial regulatory proteins, gntR family J4H94_RS09845 PF02566 OsmC-like protein J4H94_RS09850 PF01047 MarR family J4H94_RS09855 PF00034 Cytochrome c J4H94_RS09860 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4H94_RS09865 PF08406 CbbQ/NirQ/NorQ C-terminal J4H94_RS09865 PF07728 AAA domain (dynein-related subfamily) J4H94_RS09870 PF00092 von Willebrand factor type A domain J4H94_RS09875 PF05698 Bacterial trigger factor protein (TF) C-terminus J4H94_RS09875 PF05697 Bacterial trigger factor protein (TF) J4H94_RS09875 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4H94_RS09880 PF00574 Clp protease J4H94_RS09885 PF06689 ClpX C4-type zinc finger J4H94_RS09885 PF10431 C-terminal, D2-small domain, of ClpB protein J4H94_RS09885 PF07724 AAA domain (Cdc48 subfamily) J4H94_RS09890 PF00004 ATPase family associated with various cellular activities (AAA) J4H94_RS09890 PF05362 Lon protease (S16) C-terminal proteolytic domain J4H94_RS09890 PF02190 ATP-dependent protease La (LON) substrate-binding domain J4H94_RS09895 PF00216 Bacterial DNA-binding protein J4H94_RS09900 PF09312 SurA N-terminal domain J4H94_RS09900 PF00639 PPIC-type PPIASE domain J4H94_RS09905 PF01180 Dihydroorotate dehydrogenase J4H94_RS09910 PF00266 Aminotransferase class-V J4H94_RS09920 PF04055 Radical SAM superfamily J4H94_RS09920 PF13186 Iron-sulfur cluster-binding domain J4H94_RS09925 PF05402 Coenzyme PQQ synthesis protein D (PqqD) J4H94_RS09935 PF00171 Aldehyde dehydrogenase family J4H94_RS09940 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4H94_RS09940 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4H94_RS09945 PF08042 PqqA family J4H94_RS09950 PF12706 Beta-lactamase superfamily domain J4H94_RS09955 PF03070 TENA/THI-4/PQQC family J4H94_RS09960 PF05402 Coenzyme PQQ synthesis protein D (PqqD) J4H94_RS09965 PF13186 Iron-sulfur cluster-binding domain J4H94_RS09965 PF04055 Radical SAM superfamily J4H94_RS09970 PF00326 Prolyl oligopeptidase family J4H94_RS09975 PF00465 Iron-containing alcohol dehydrogenase J4H94_RS09980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS09980 PF00072 Response regulator receiver domain J4H94_RS09980 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS09980 PF09456 RcsC Alpha-Beta-Loop (ABL) J4H94_RS09995 PF00529 HlyD membrane-fusion protein of T1SS J4H94_RS09995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4H94_RS10000 PF00873 AcrB/AcrD/AcrF family J4H94_RS10010 PF00072 Response regulator receiver domain J4H94_RS10010 PF00196 Bacterial regulatory proteins, luxR family J4H94_RS10015 PF08459 UvrC Helix-hairpin-helix N-terminal J4H94_RS10015 PF02151 UvrB/uvrC motif J4H94_RS10015 PF01541 GIY-YIG catalytic domain J4H94_RS10020 PF01066 CDP-alcohol phosphatidyltransferase J4H94_RS10055 PF01758 Sodium Bile acid symporter family J4H94_RS10065 PF01022 Bacterial regulatory protein, arsR family J4H94_RS10070 PF03358 NADPH-dependent FMN reductase J4H94_RS10080 PF02694 Uncharacterised BCR, YnfA/UPF0060 family J4H94_RS10085 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4H94_RS10085 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4H94_RS10115 PF18081 Fanconi anemia-associated nuclease SAP domain J4H94_RS10115 PF08774 VRR-NUC domain J4H94_RS10120 PF06969 HemN C-terminal domain J4H94_RS10120 PF04055 Radical SAM superfamily J4H94_RS10125 PF12729 Four helix bundle sensory module for signal transduction J4H94_RS10125 PF00672 HAMP domain J4H94_RS10125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS10130 PF00483 Nucleotidyl transferase J4H94_RS10135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4H94_RS10140 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4H94_RS10140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4H94_RS10150 PF00118 TCP-1/cpn60 chaperonin family J4H94_RS10160 PF05362 Lon protease (S16) C-terminal proteolytic domain J4H94_RS10160 PF13654 AAA domain J4H94_RS10165 PF13545 Crp-like helix-turn-helix domain J4H94_RS10165 PF00027 Cyclic nucleotide-binding domain J4H94_RS10170 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J4H94_RS10170 PF14572 Phosphoribosyl synthetase-associated domain J4H94_RS10180 PF00501 AMP-binding enzyme J4H94_RS10180 PF13193 AMP-binding enzyme C-terminal domain J4H94_RS10185 PF00676 Dehydrogenase E1 component J4H94_RS10190 PF02780 Transketolase, C-terminal domain J4H94_RS10190 PF02779 Transketolase, pyrimidine binding domain J4H94_RS10190 PF00364 Biotin-requiring enzyme J4H94_RS10195 PF02817 e3 binding domain J4H94_RS10195 PF00364 Biotin-requiring enzyme J4H94_RS10195 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4H94_RS10210 PF01292 Prokaryotic cytochrome b561 J4H94_RS10230 PF10417 C-terminal domain of 1-Cys peroxiredoxin J4H94_RS10230 PF00578 AhpC/TSA family J4H94_RS10235 PF00753 Metallo-beta-lactamase superfamily J4H94_RS10255 PF07759 Protein of unknown function (DUF1615) J4H94_RS10260 PF00355 Rieske [2Fe-2S] domain J4H94_RS10270 PF13298 DNA polymerase Ligase (LigD) J4H94_RS10270 PF01068 ATP dependent DNA ligase domain J4H94_RS10270 PF04679 ATP dependent DNA ligase C terminal region J4H94_RS10290 PF05974 Domain of unknown function (DUF892) J4H94_RS10295 PF12794 Mechanosensitive ion channel inner membrane domain 1 J4H94_RS10295 PF00924 Mechanosensitive ion channel J4H94_RS10295 PF12795 Mechanosensitive ion channel porin domain J4H94_RS10300 PF00994 Probable molybdopterin binding domain J4H94_RS10300 PF18146 Damage-inducible protein CinA KH domain J4H94_RS10300 PF02464 Competence-damaged protein J4H94_RS10305 PF00534 Glycosyl transferases group 1 J4H94_RS10305 PF08323 Starch synthase catalytic domain J4H94_RS10310 PF00128 Alpha amylase, catalytic domain J4H94_RS10310 PF11941 Domain of unknown function (DUF3459) J4H94_RS10310 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J4H94_RS10315 PF02446 4-alpha-glucanotransferase J4H94_RS10320 PF00128 Alpha amylase, catalytic domain J4H94_RS10330 PF00128 Alpha amylase, catalytic domain J4H94_RS10330 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J4H94_RS10335 PF01551 Peptidase family M23 J4H94_RS10335 PF08525 Opacity-associated protein A N-terminal motif J4H94_RS10335 PF01476 LysM domain J4H94_RS10345 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J4H94_RS10350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS10350 PF03466 LysR substrate binding domain J4H94_RS10355 PF08240 Alcohol dehydrogenase GroES-like domain J4H94_RS10355 PF13823 Alcohol dehydrogenase GroES-associated J4H94_RS10355 PF00107 Zinc-binding dehydrogenase J4H94_RS10365 PF03372 Endonuclease/Exonuclease/phosphatase family J4H94_RS10370 PF13091 PLD-like domain J4H94_RS10375 PF03706 Lysylphosphatidylglycerol synthase TM region J4H94_RS10380 PF00128 Alpha amylase, catalytic domain J4H94_RS10380 PF02806 Alpha amylase, C-terminal all-beta domain J4H94_RS10380 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J4H94_RS10385 PF00128 Alpha amylase, catalytic domain J4H94_RS10385 PF16657 Maltogenic Amylase, C-terminal domain J4H94_RS10390 PF11896 Domain of unknown function (DUF3416) J4H94_RS10390 PF00128 Alpha amylase, catalytic domain J4H94_RS10400 PF04216 Protein involved in formate dehydrogenase formation J4H94_RS10405 PF01292 Prokaryotic cytochrome b561 J4H94_RS10410 PF09163 Formate dehydrogenase N, transmembrane J4H94_RS10410 PF12800 4Fe-4S binding domain J4H94_RS10410 PF13247 4Fe-4S dicluster domain J4H94_RS10420 PF04679 ATP dependent DNA ligase C terminal region J4H94_RS10420 PF01068 ATP dependent DNA ligase domain J4H94_RS10420 PF13298 DNA polymerase Ligase (LigD) J4H94_RS10425 PF02735 Ku70/Ku80 beta-barrel domain J4H94_RS10435 PF08659 KR domain J4H94_RS10435 PF14765 Polyketide synthase dehydratase J4H94_RS10435 PF08240 Alcohol dehydrogenase GroES-like domain J4H94_RS10435 PF00698 Acyl transferase domain J4H94_RS10435 PF16197 Ketoacyl-synthetase C-terminal extension J4H94_RS10435 PF00109 Beta-ketoacyl synthase, N-terminal domain J4H94_RS10435 PF02801 Beta-ketoacyl synthase, C-terminal domain J4H94_RS10435 PF00550 Phosphopantetheine attachment site J4H94_RS10440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS10440 PF03466 LysR substrate binding domain J4H94_RS10445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4H94_RS10450 PF00873 AcrB/AcrD/AcrF family J4H94_RS10455 PF02321 Outer membrane efflux protein J4H94_RS10460 PF03480 Bacterial extracellular solute-binding protein, family 7 J4H94_RS10465 PF02321 Outer membrane efflux protein J4H94_RS10470 PF00873 AcrB/AcrD/AcrF family J4H94_RS10475 PF00873 AcrB/AcrD/AcrF family J4H94_RS10480 PF13533 Biotin-lipoyl like J4H94_RS10485 PF03023 Lipid II flippase MurJ J4H94_RS10495 PF08534 Redoxin J4H94_RS10500 PF01235 Sodium:alanine symporter family J4H94_RS10505 PF04357 TamB, inner membrane protein subunit of TAM complex J4H94_RS10510 PF01103 Surface antigen J4H94_RS10510 PF07244 Surface antigen variable number repeat J4H94_RS10510 PF17243 POTRA domain TamA domain 1 J4H94_RS10520 PF03372 Endonuclease/Exonuclease/phosphatase family J4H94_RS10525 PF12849 PBP superfamily domain J4H94_RS10530 PF00294 pfkB family carbohydrate kinase J4H94_RS10545 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS10550 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS10555 PF00005 ABC transporter J4H94_RS10555 PF17912 MalK OB fold domain J4H94_RS10560 PF08125 Mannitol dehydrogenase C-terminal domain J4H94_RS10560 PF01232 Mannitol dehydrogenase Rossmann domain J4H94_RS10565 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J4H94_RS10565 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J4H94_RS10570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4H94_RS10570 PF02770 Acyl-CoA dehydrogenase, middle domain J4H94_RS10570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4H94_RS10575 PF03466 LysR substrate binding domain J4H94_RS10575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS10580 PF00356 Bacterial regulatory proteins, lacI family J4H94_RS10585 PF03480 Bacterial extracellular solute-binding protein, family 7 J4H94_RS10590 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4H94_RS10605 PF03969 AFG1-like ATPase J4H94_RS10610 PF03466 LysR substrate binding domain J4H94_RS10610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS10615 PF01266 FAD dependent oxidoreductase J4H94_RS10625 PF07715 TonB-dependent Receptor Plug Domain J4H94_RS10625 PF00593 TonB dependent receptor J4H94_RS10630 PF12848 ABC transporter J4H94_RS10630 PF00005 ABC transporter J4H94_RS10635 PF02673 Bacitracin resistance protein BacA J4H94_RS10640 PF17200 Single Cache domain 2 J4H94_RS10640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS10640 PF00672 HAMP domain J4H94_RS10655 PF04239 Protein of unknown function (DUF421) J4H94_RS10670 PF05230 MASE2 domain J4H94_RS10670 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS10675 PF00072 Response regulator receiver domain J4H94_RS10680 PF01106 NifU-like domain J4H94_RS10680 PF01521 Iron-sulphur cluster biosynthesis J4H94_RS10690 PF02574 Homocysteine S-methyltransferase J4H94_RS10690 PF02607 B12 binding domain J4H94_RS10690 PF02310 B12 binding domain J4H94_RS10690 PF02965 Vitamin B12 dependent methionine synthase, activation domain J4H94_RS10690 PF00809 Pterin binding enzyme J4H94_RS10700 PF01757 Acyltransferase family J4H94_RS10725 PF07690 Major Facilitator Superfamily J4H94_RS10730 PF04055 Radical SAM superfamily J4H94_RS10745 PF00011 Hsp20/alpha crystallin family J4H94_RS10755 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4H94_RS10755 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4H94_RS10765 PF08240 Alcohol dehydrogenase GroES-like domain J4H94_RS10765 PF00107 Zinc-binding dehydrogenase J4H94_RS10770 PF08496 Peptidase family S49 N-terminal J4H94_RS10770 PF01343 Peptidase family S49 J4H94_RS10800 PF01925 Sulfite exporter TauE/SafE J4H94_RS10805 PF09297 NADH pyrophosphatase zinc ribbon domain J4H94_RS10805 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain J4H94_RS10805 PF00293 NUDIX domain J4H94_RS10815 PF00378 Enoyl-CoA hydratase/isomerase J4H94_RS10820 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain J4H94_RS10820 PF01276 Orn/Lys/Arg decarboxylase, major domain J4H94_RS10820 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain J4H94_RS10825 PF00929 Exonuclease J4H94_RS10830 PF00075 RNase H J4H94_RS10840 PF00753 Metallo-beta-lactamase superfamily J4H94_RS10840 PF16123 Hydroxyacylglutathione hydrolase C-terminus J4H94_RS10845 PF01464 Transglycosylase SLT domain J4H94_RS10845 PF01476 LysM domain J4H94_RS10855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4H94_RS10860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4H94_RS10865 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS10870 PF12911 N-terminal TM domain of oligopeptide transport permease C J4H94_RS10870 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS10875 PF00005 ABC transporter J4H94_RS10875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4H94_RS10890 PF12833 Helix-turn-helix domain J4H94_RS10895 PF01011 PQQ enzyme repeat J4H94_RS10895 PF13360 PQQ-like domain J4H94_RS10905 PF16123 Hydroxyacylglutathione hydrolase C-terminus J4H94_RS10905 PF00753 Metallo-beta-lactamase superfamily J4H94_RS10920 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4H94_RS10925 PF01011 PQQ enzyme repeat J4H94_RS10925 PF13360 PQQ-like domain J4H94_RS10935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS10935 PF08447 PAS fold J4H94_RS10935 PF13426 PAS domain J4H94_RS10955 PF00072 Response regulator receiver domain J4H94_RS10955 PF00196 Bacterial regulatory proteins, luxR family J4H94_RS10960 PF05231 MASE1 J4H94_RS10960 PF07730 Histidine kinase J4H94_RS10960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS10970 PF00672 HAMP domain J4H94_RS10970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS10990 PF00005 ABC transporter J4H94_RS11005 PF00196 Bacterial regulatory proteins, luxR family J4H94_RS11005 PF00072 Response regulator receiver domain J4H94_RS11010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4H94_RS11010 PF14824 Sirohaem biosynthesis protein central J4H94_RS11010 PF10414 Sirohaem synthase dimerisation region J4H94_RS11015 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4H94_RS11015 PF02403 Seryl-tRNA synthetase N-terminal domain J4H94_RS11020 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J4H94_RS11025 PF16193 AAA C-terminal domain J4H94_RS11025 PF00004 ATPase family associated with various cellular activities (AAA) J4H94_RS11025 PF12002 MgsA AAA+ ATPase C terminal J4H94_RS11030 PF03548 Outer membrane lipoprotein carrier protein LolA J4H94_RS11035 PF09397 Ftsk gamma domain J4H94_RS11035 PF17854 FtsK alpha domain J4H94_RS11035 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J4H94_RS11035 PF01580 FtsK/SpoIIIE family J4H94_RS11040 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4H94_RS11045 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J4H94_RS11050 PF04377 Arginine-tRNA-protein transferase, C terminus J4H94_RS11050 PF04376 Arginine-tRNA-protein transferase, N terminus J4H94_RS11055 PF01176 Translation initiation factor 1A / IF-1 J4H94_RS11060 PF00004 ATPase family associated with various cellular activities (AAA) J4H94_RS11060 PF07724 AAA domain (Cdc48 subfamily) J4H94_RS11060 PF17871 AAA lid domain J4H94_RS11060 PF02861 Clp amino terminal domain, pathogenicity island component J4H94_RS11060 PF10431 C-terminal, D2-small domain, of ClpB protein J4H94_RS11065 PF02617 ATP-dependent Clp protease adaptor protein ClpS J4H94_RS11075 PF00180 Isocitrate/isopropylmalate dehydrogenase J4H94_RS11080 PF03971 Monomeric isocitrate dehydrogenase J4H94_RS11085 PF00293 NUDIX domain J4H94_RS11095 PF04356 Protein of unknown function (DUF489) J4H94_RS11100 PF08328 Adenylosuccinate lyase C-terminal J4H94_RS11100 PF00206 Lyase J4H94_RS11105 PF08007 Cupin superfamily protein J4H94_RS11110 PF13673 Acetyltransferase (GNAT) domain J4H94_RS11125 PF00463 Isocitrate lyase family J4H94_RS11135 PF01594 AI-2E family transporter J4H94_RS11140 PF03553 Na+/H+ antiporter family J4H94_RS11140 PF13726 Na+-H+ antiporter family J4H94_RS11145 PF01242 6-pyruvoyl tetrahydropterin synthase J4H94_RS11175 PF01979 Amidohydrolase family J4H94_RS11185 PF13419 Haloacid dehalogenase-like hydrolase J4H94_RS11190 PF00106 short chain dehydrogenase J4H94_RS11195 PF01479 S4 domain J4H94_RS11195 PF00849 RNA pseudouridylate synthase J4H94_RS11200 PF01081 KDPG and KHG aldolase J4H94_RS11205 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J4H94_RS11210 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J4H94_RS11210 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J4H94_RS11215 PF05175 Methyltransferase small domain J4H94_RS11225 PF01713 Smr domain J4H94_RS11230 PF01227 GTP cyclohydrolase I J4H94_RS11235 PF02798 Glutathione S-transferase, N-terminal domain J4H94_RS11240 PF00155 Aminotransferase class I and II J4H94_RS11250 PF00575 S1 RNA binding domain J4H94_RS11255 PF02224 Cytidylate kinase J4H94_RS11260 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4H94_RS11265 PF00155 Aminotransferase class I and II J4H94_RS11270 PF00800 Prephenate dehydratase J4H94_RS11270 PF01842 ACT domain J4H94_RS11270 PF01817 Chorismate mutase type II J4H94_RS11275 PF00266 Aminotransferase class-V J4H94_RS11280 PF03989 DNA gyrase C-terminal domain, beta-propeller J4H94_RS11280 PF00521 DNA gyrase/topoisomerase IV, subunit A J4H94_RS11285 PF01008 Initiation factor 2 subunit family J4H94_RS11300 PF01336 OB-fold nucleic acid binding domain J4H94_RS11300 PF02811 PHP domain J4H94_RS11300 PF14579 Helix-hairpin-helix motif J4H94_RS11300 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4H94_RS11300 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4H94_RS11315 PF00216 Bacterial DNA-binding protein J4H94_RS11320 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J4H94_RS11320 PF03484 tRNA synthetase B5 domain J4H94_RS11320 PF03147 Ferredoxin-fold anticodon binding domain J4H94_RS11320 PF03483 B3/4 domain J4H94_RS11320 PF01588 Putative tRNA binding domain J4H94_RS11325 PF01409 tRNA synthetases class II core domain (F) J4H94_RS11325 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J4H94_RS11330 PF00453 Ribosomal protein L20 J4H94_RS11335 PF01632 Ribosomal protein L35 J4H94_RS11340 PF05198 Translation initiation factor IF-3, N-terminal domain J4H94_RS11340 PF00707 Translation initiation factor IF-3, C-terminal domain J4H94_RS11345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4H94_RS11345 PF02824 TGS domain J4H94_RS11345 PF03129 Anticodon binding domain J4H94_RS11345 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4H94_RS11355 PF01266 FAD dependent oxidoreductase J4H94_RS11380 PF12804 MobA-like NTP transferase domain J4H94_RS11400 PF03573 outer membrane porin, OprD family J4H94_RS11420 PF01966 HD domain J4H94_RS11430 PF04320 Protein with unknown function (DUF469) J4H94_RS11435 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family J4H94_RS11440 PF10672 S-adenosylmethionine-dependent methyltransferase J4H94_RS11440 PF02926 THUMP domain J4H94_RS11440 PF01170 Putative RNA methylase family UPF0020 J4H94_RS11445 PF04957 Ribosome modulation factor J4H94_RS11450 PF01180 Dihydroorotate dehydrogenase J4H94_RS11465 PF05088 Bacterial NAD-glutamate dehydrogenase J4H94_RS11470 PF17863 AAA lid domain J4H94_RS11470 PF07726 ATPase family associated with various cellular activities (AAA) J4H94_RS11475 PF01882 Protein of unknown function DUF58 J4H94_RS11505 PF08376 Nitrate and nitrite sensing J4H94_RS11505 PF03861 ANTAR domain J4H94_RS11520 PF00294 pfkB family carbohydrate kinase J4H94_RS11525 PF07690 Major Facilitator Superfamily J4H94_RS11530 PF03793 PASTA domain J4H94_RS11530 PF00069 Protein kinase domain J4H94_RS11540 PF04324 BFD-like [2Fe-2S] binding domain J4H94_RS11540 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4H94_RS11540 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4H94_RS11540 PF18267 Rubredoxin NAD+ reductase C-terminal domain J4H94_RS11540 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4H94_RS11545 PF00355 Rieske [2Fe-2S] domain J4H94_RS11550 PF00384 Molybdopterin oxidoreductase J4H94_RS11550 PF04324 BFD-like [2Fe-2S] binding domain J4H94_RS11550 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4H94_RS11550 PF01568 Molydopterin dinucleotide binding domain J4H94_RS11555 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4H94_RS11565 PF14870 Photosynthesis system II assembly factor YCF48 J4H94_RS11570 PF01433 Peptidase family M1 domain J4H94_RS11570 PF11940 Domain of unknown function (DUF3458) Ig-like fold J4H94_RS11570 PF17432 Domain of unknown function (DUF3458_C) ARM repeats J4H94_RS11585 PF01694 Rhomboid family J4H94_RS11585 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease J4H94_RS11590 PF00149 Calcineurin-like phosphoesterase J4H94_RS11595 PF01513 ATP-NAD kinase J4H94_RS11610 PF01925 Sulfite exporter TauE/SafE J4H94_RS11615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS11615 PF03466 LysR substrate binding domain J4H94_RS11625 PF17284 Spermidine synthase tetramerisation domain J4H94_RS11630 PF00730 HhH-GPD superfamily base excision DNA repair protein J4H94_RS11630 PF02805 Metal binding domain of Ada J4H94_RS11630 PF12833 Helix-turn-helix domain J4H94_RS11630 PF06029 AlkA N-terminal domain J4H94_RS11650 PF03079 ARD/ARD' family J4H94_RS11655 PF12832 MFS_1 like family J4H94_RS11660 PF01264 Chorismate synthase J4H94_RS11675 PF02264 LamB porin J4H94_RS11680 PF00005 ABC transporter J4H94_RS11680 PF08402 TOBE domain J4H94_RS11685 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS11690 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS11695 PF01547 Bacterial extracellular solute-binding protein J4H94_RS11700 PF00672 HAMP domain J4H94_RS11700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS11700 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS11705 PF00072 Response regulator receiver domain J4H94_RS11705 PF00486 Transcriptional regulatory protein, C terminal J4H94_RS11710 PF02685 Glucokinase J4H94_RS11715 PF00920 Dehydratase family J4H94_RS11720 PF04079 Segregation and condensation complex subunit ScpB J4H94_RS11725 PF02616 Segregation and condensation protein ScpA J4H94_RS11730 PF00579 tRNA synthetases class I (W and Y) J4H94_RS11735 PF01300 Telomere recombination J4H94_RS11745 PF03795 YCII-related domain J4H94_RS11755 PF00072 Response regulator receiver domain J4H94_RS11755 PF00486 Transcriptional regulatory protein, C terminal J4H94_RS11765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS11765 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS11765 PF16750 Sensor domain of 2-component histidine kinase J4H94_RS11765 PF00672 HAMP domain J4H94_RS11770 PF00881 Nitroreductase family J4H94_RS11775 PF03692 Putative zinc- or iron-chelating domain J4H94_RS11780 PF02386 Cation transport protein J4H94_RS11785 PF05661 Protein of unknown function (DUF808) J4H94_RS11790 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J4H94_RS11790 PF12833 Helix-turn-helix domain J4H94_RS11800 PF00211 Adenylate and Guanylate cyclase catalytic domain J4H94_RS11805 PF12852 Cupin J4H94_RS11805 PF12833 Helix-turn-helix domain J4H94_RS11820 PF01734 Patatin-like phospholipase J4H94_RS11830 PF09382 RQC domain J4H94_RS11830 PF00570 HRDC domain J4H94_RS11830 PF00271 Helicase conserved C-terminal domain J4H94_RS11830 PF16124 RecQ zinc-binding J4H94_RS11830 PF00270 DEAD/DEAH box helicase J4H94_RS11840 PF04304 Protein of unknown function (DUF454) J4H94_RS11855 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) J4H94_RS11865 PF00291 Pyridoxal-phosphate dependent enzyme J4H94_RS11875 PF17871 AAA lid domain J4H94_RS11875 PF02861 Clp amino terminal domain, pathogenicity island component J4H94_RS11875 PF10431 C-terminal, D2-small domain, of ClpB protein J4H94_RS11875 PF07724 AAA domain (Cdc48 subfamily) J4H94_RS11875 PF00004 ATPase family associated with various cellular activities (AAA) J4H94_RS11895 PF13230 Glutamine amidotransferases class-II J4H94_RS11905 PF00582 Universal stress protein family J4H94_RS11915 PF16326 ABC transporter C-terminal domain J4H94_RS11915 PF12848 ABC transporter J4H94_RS11915 PF00005 ABC transporter J4H94_RS11920 PF14718 Soluble lytic murein transglycosylase L domain J4H94_RS11920 PF01464 Transglycosylase SLT domain J4H94_RS11925 PF00111 2Fe-2S iron-sulfur cluster binding domain J4H94_RS11925 PF03473 MOSC domain J4H94_RS11925 PF03476 MOSC N-terminal beta barrel domain J4H94_RS11930 PF00072 Response regulator receiver domain J4H94_RS11935 PF00781 Diacylglycerol kinase catalytic domain J4H94_RS11940 PF02397 Bacterial sugar transferase J4H94_RS11945 PF01451 Low molecular weight phosphotyrosine protein phosphatase J4H94_RS11950 PF02706 Chain length determinant protein J4H94_RS11950 PF13614 AAA domain J4H94_RS11950 PF13807 G-rich domain on putative tyrosine kinase J4H94_RS11955 PF00150 Cellulase (glycosyl hydrolase family 5) J4H94_RS11985 PF03808 Glycosyl transferase WecB/TagA/CpsF family J4H94_RS11990 PF02563 Polysaccharide biosynthesis/export protein J4H94_RS11990 PF10531 SLBB domain J4H94_RS11990 PF18412 Outer-membrane lipoprotein Wza C-terminal domain J4H94_RS11995 PF02803 Thiolase, C-terminal domain J4H94_RS11995 PF00108 Thiolase, N-terminal domain J4H94_RS12000 PF03976 Polyphosphate kinase 2 (PPK2) J4H94_RS12015 PF02719 Polysaccharide biosynthesis protein J4H94_RS12020 PF02397 Bacterial sugar transferase J4H94_RS12025 PF01370 NAD dependent epimerase/dehydratase family J4H94_RS12030 PF00535 Glycosyl transferase family 2 J4H94_RS12035 PF01050 Mannose-6-phosphate isomerase J4H94_RS12035 PF00483 Nucleotidyl transferase J4H94_RS12040 PF00293 NUDIX domain J4H94_RS12045 PF01370 NAD dependent epimerase/dehydratase family J4H94_RS12050 PF16363 GDP-mannose 4,6 dehydratase J4H94_RS12055 PF00534 Glycosyl transferases group 1 J4H94_RS12080 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J4H94_RS12080 PF00753 Metallo-beta-lactamase superfamily J4H94_RS12080 PF10996 Beta-Casp domain J4H94_RS12085 PF13614 AAA domain J4H94_RS12085 PF13807 G-rich domain on putative tyrosine kinase J4H94_RS12085 PF02706 Chain length determinant protein J4H94_RS12090 PF13614 AAA domain J4H94_RS12090 PF13807 G-rich domain on putative tyrosine kinase J4H94_RS12090 PF13614 AAA domain J4H94_RS12090 PF02706 Chain length determinant protein J4H94_RS12090 PF13807 G-rich domain on putative tyrosine kinase J4H94_RS12090 PF02706 Chain length determinant protein J4H94_RS12095 PF00216 Bacterial DNA-binding protein J4H94_RS12100 PF03880 DbpA RNA binding domain J4H94_RS12100 PF00270 DEAD/DEAH box helicase J4H94_RS12100 PF00271 Helicase conserved C-terminal domain J4H94_RS12105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS12105 PF02743 Cache domain J4H94_RS12105 PF00672 HAMP domain J4H94_RS12115 PF01474 Class-II DAHP synthetase family J4H94_RS12120 PF00939 Sodium:sulfate symporter transmembrane region J4H94_RS12125 PF01132 Elongation factor P (EF-P) OB domain J4H94_RS12125 PF08207 Elongation factor P (EF-P) KOW-like domain J4H94_RS12125 PF09285 Elongation factor P, C-terminal J4H94_RS12145 PF02796 Helix-turn-helix domain of resolvase J4H94_RS12145 PF00239 Resolvase, N terminal domain J4H94_RS12150 PF11867 Domain of unknown function (DUF3387) J4H94_RS12150 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) J4H94_RS12150 PF18766 SWI2/SNF2 ATPase J4H94_RS12160 PF02384 N-6 DNA Methylase J4H94_RS12190 PF01593 Flavin containing amine oxidoreductase J4H94_RS12195 PF01618 MotA/TolQ/ExbB proton channel family J4H94_RS12200 PF13677 Membrane MotB of proton-channel complex MotA/MotB J4H94_RS12200 PF00691 OmpA family J4H94_RS12205 PF02535 ZIP Zinc transporter J4H94_RS12210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4H94_RS12215 PF12704 MacB-like periplasmic core domain J4H94_RS12215 PF02687 FtsX-like permease family J4H94_RS12220 PF00005 ABC transporter J4H94_RS12225 PF00753 Metallo-beta-lactamase superfamily J4H94_RS12235 PF00916 Sulfate permease family J4H94_RS12235 PF01740 STAS domain J4H94_RS12255 PF04143 Sulphur transport J4H94_RS12285 PF02798 Glutathione S-transferase, N-terminal domain J4H94_RS12295 PF00255 Glutathione peroxidase J4H94_RS12300 PF01641 SelR domain J4H94_RS12305 PF00155 Aminotransferase class I and II J4H94_RS12315 PF01435 Peptidase family M48 J4H94_RS12325 PF05724 Thiopurine S-methyltransferase (TPMT) J4H94_RS12330 PF00158 Sigma-54 interaction domain J4H94_RS12330 PF02954 Bacterial regulatory protein, Fis family J4H94_RS12330 PF00072 Response regulator receiver domain J4H94_RS12335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS12335 PF13188 PAS domain J4H94_RS12335 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS12340 PF00158 Sigma-54 interaction domain J4H94_RS12340 PF06490 Flagellar regulatory protein FleQ J4H94_RS12340 PF02954 Bacterial regulatory protein, Fis family J4H94_RS12355 PF03918 Cytochrome C biogenesis protein J4H94_RS12360 PF08534 Redoxin J4H94_RS12365 PF01578 Cytochrome C assembly protein J4H94_RS12365 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J4H94_RS12370 PF03100 CcmE J4H94_RS12375 PF04995 Heme exporter protein D (CcmD) J4H94_RS12380 PF01578 Cytochrome C assembly protein J4H94_RS12385 PF03379 CcmB protein J4H94_RS12390 PF00005 ABC transporter J4H94_RS12400 PF01312 FlhB HrpN YscU SpaS Family J4H94_RS12415 PF01584 CheW-like domain J4H94_RS12425 PF13614 AAA domain J4H94_RS12430 PF00691 OmpA family J4H94_RS12430 PF13677 Membrane MotB of proton-channel complex MotA/MotB J4H94_RS12435 PF01618 MotA/TolQ/ExbB proton channel family J4H94_RS12440 PF00072 Response regulator receiver domain J4H94_RS12440 PF01339 CheB methylesterase J4H94_RS12445 PF01584 CheW-like domain J4H94_RS12445 PF02895 Signal transducing histidine kinase, homodimeric domain J4H94_RS12445 PF00072 Response regulator receiver domain J4H94_RS12445 PF01627 Hpt domain J4H94_RS12445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS12450 PF04344 Chemotaxis phosphatase, CheZ J4H94_RS12455 PF00072 Response regulator receiver domain J4H94_RS12460 PF04545 Sigma-70, region 4 J4H94_RS12460 PF04542 Sigma-70 region 2 J4H94_RS12460 PF04539 Sigma-70 region 3 J4H94_RS12465 PF10609 NUBPL iron-transfer P-loop NTPase J4H94_RS12470 PF00448 SRP54-type protein, GTPase domain J4H94_RS12475 PF00771 FHIPEP family J4H94_RS12480 PF00080 Copper/zinc superoxide dismutase (SODC) J4H94_RS12485 PF01312 FlhB HrpN YscU SpaS Family J4H94_RS12490 PF01311 Bacterial export proteins, family 1 J4H94_RS12495 PF01313 Bacterial export proteins, family 3 J4H94_RS12500 PF00813 FliP family J4H94_RS12505 PF04347 Flagellar biosynthesis protein, FliO J4H94_RS12510 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J4H94_RS12515 PF02154 Flagellar motor switch protein FliM J4H94_RS12515 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J4H94_RS12535 PF00072 Response regulator receiver domain J4H94_RS12535 PF00486 Transcriptional regulatory protein, C terminal J4H94_RS12540 PF13466 STAS domain J4H94_RS12550 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4H94_RS12550 PF18269 T3SS EscN ATPase C-terminal domain J4H94_RS12560 PF14841 FliG middle domain J4H94_RS12560 PF14842 FliG N-terminal domain J4H94_RS12560 PF01706 FliG C-terminal domain J4H94_RS12565 PF08345 Flagellar M-ring protein C-terminal J4H94_RS12565 PF01514 Secretory protein of YscJ/FliF family J4H94_RS12570 PF02049 Flagellar hook-basal body complex protein FliE J4H94_RS12575 PF03594 Benzoate membrane transport protein J4H94_RS12585 PF00107 Zinc-binding dehydrogenase J4H94_RS12585 PF16884 N-terminal domain of oxidoreductase J4H94_RS12590 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J4H94_RS12600 PF00563 EAL domain J4H94_RS12600 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS12600 PF03707 Bacterial signalling protein N terminal repeat J4H94_RS12600 PF13188 PAS domain J4H94_RS12610 PF00155 Aminotransferase class I and II J4H94_RS12610 PF00392 Bacterial regulatory proteins, gntR family J4H94_RS12615 PF05736 OprF membrane domain J4H94_RS12615 PF00691 OmpA family J4H94_RS12630 PF00766 Electron transfer flavoprotein FAD-binding domain J4H94_RS12630 PF01012 Electron transfer flavoprotein domain J4H94_RS12635 PF01012 Electron transfer flavoprotein domain J4H94_RS12660 PF00440 Bacterial regulatory proteins, tetR family J4H94_RS12665 PF00266 Aminotransferase class-V J4H94_RS12670 PF00324 Amino acid permease J4H94_RS12675 PF01026 TatD related DNase J4H94_RS12685 PF09115 DNA polymerase III, delta subunit, C terminal J4H94_RS12690 PF02223 Thymidylate kinase J4H94_RS12695 PF02618 YceG-like family J4H94_RS12700 PF01063 Amino-transferase class IV J4H94_RS12705 PF02801 Beta-ketoacyl synthase, C-terminal domain J4H94_RS12705 PF00109 Beta-ketoacyl synthase, N-terminal domain J4H94_RS12710 PF00550 Phosphopantetheine attachment site J4H94_RS12720 PF00698 Acyl transferase domain J4H94_RS12725 PF02504 Fatty acid synthesis protein J4H94_RS12730 PF01783 Ribosomal L32p protein family J4H94_RS12735 PF02620 Large ribosomal RNA subunit accumulation protein YceD J4H94_RS12740 PF02545 Maf-like protein J4H94_RS12745 PF01343 Peptidase family S49 J4H94_RS12745 PF06965 Na+/H+ antiporter 1 J4H94_RS12750 PF13419 Haloacid dehalogenase-like hydrolase J4H94_RS12755 PF00849 RNA pseudouridylate synthase J4H94_RS12755 PF01479 S4 domain J4H94_RS12760 PF12111 Polyribonucleotide phosphorylase C terminal J4H94_RS12760 PF10150 Ribonuclease E/G family J4H94_RS12760 PF00575 S1 RNA binding domain J4H94_RS12765 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J4H94_RS12765 PF01565 FAD binding domain J4H94_RS12770 PF01451 Low molecular weight phosphotyrosine protein phosphatase J4H94_RS12775 PF02348 Cytidylyltransferase J4H94_RS12780 PF03966 Trm112p-like protein J4H94_RS12785 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J4H94_RS12795 PF01618 MotA/TolQ/ExbB proton channel family J4H94_RS12800 PF00753 Metallo-beta-lactamase superfamily J4H94_RS12800 PF03772 Competence protein J4H94_RS12810 PF02687 FtsX-like permease family J4H94_RS12810 PF12704 MacB-like periplasmic core domain J4H94_RS12815 PF00005 ABC transporter J4H94_RS12820 PF12704 MacB-like periplasmic core domain J4H94_RS12820 PF02687 FtsX-like permease family J4H94_RS12835 PF03009 Glycerophosphoryl diester phosphodiesterase family J4H94_RS12840 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4H94_RS12840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4H94_RS12850 PF02424 ApbE family J4H94_RS12855 PF00175 Oxidoreductase NAD-binding domain J4H94_RS12855 PF00111 2Fe-2S iron-sulfur cluster binding domain J4H94_RS12855 PF00970 Oxidoreductase FAD-binding domain J4H94_RS12860 PF02508 Rnf-Nqr subunit, membrane protein J4H94_RS12865 PF02508 Rnf-Nqr subunit, membrane protein J4H94_RS12870 PF04205 FMN-binding domain J4H94_RS12875 PF03116 NQR2, RnfD, RnfE family J4H94_RS12880 PF11973 NQRA C-terminal domain J4H94_RS12880 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) J4H94_RS12885 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4H94_RS12885 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4H94_RS12890 PF17757 UvrB interaction domain J4H94_RS12890 PF03461 TRCF domain J4H94_RS12890 PF00271 Helicase conserved C-terminal domain J4H94_RS12890 PF00270 DEAD/DEAH box helicase J4H94_RS12890 PF02559 CarD-like/TRCF domain J4H94_RS12900 PF00271 Helicase conserved C-terminal domain J4H94_RS12900 PF00176 SNF2 family N-terminal domain J4H94_RS12900 PF12419 SNF2 Helicase protein J4H94_RS12915 PF04675 DNA ligase N terminus J4H94_RS12915 PF04679 ATP dependent DNA ligase C terminal region J4H94_RS12915 PF01068 ATP dependent DNA ligase domain J4H94_RS12920 PF00270 DEAD/DEAH box helicase J4H94_RS12920 PF08494 DEAD/H associated J4H94_RS12920 PF00271 Helicase conserved C-terminal domain J4H94_RS12935 PF05139 Erythromycin esterase J4H94_RS12935 PF00156 Phosphoribosyl transferase domain J4H94_RS12950 PF03819 MazG nucleotide pyrophosphohydrolase domain J4H94_RS12955 PF13291 ACT domain J4H94_RS12955 PF04607 Region found in RelA / SpoT proteins J4H94_RS12955 PF02824 TGS domain J4H94_RS12960 PF01938 TRAM domain J4H94_RS12960 PF05958 tRNA (Uracil-5-)-methyltransferase J4H94_RS12965 PF00291 Pyridoxal-phosphate dependent enzyme J4H94_RS12970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS12970 PF03466 LysR substrate binding domain J4H94_RS12975 PF03458 UPF0126 domain J4H94_RS12980 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS12980 PF00672 HAMP domain J4H94_RS12980 PF01627 Hpt domain J4H94_RS12980 PF00072 Response regulator receiver domain J4H94_RS12980 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4H94_RS12980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS12985 PF05430 S-adenosyl-L-methionine-dependent methyltransferase J4H94_RS12985 PF01266 FAD dependent oxidoreductase J4H94_RS13005 PF03466 LysR substrate binding domain J4H94_RS13005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS13020 PF00271 Helicase conserved C-terminal domain J4H94_RS13020 PF00270 DEAD/DEAH box helicase J4H94_RS13040 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J4H94_RS13055 PF07396 Phosphate-selective porin O and P J4H94_RS13060 PF00899 ThiF family J4H94_RS13065 PF07687 Peptidase dimerisation domain J4H94_RS13065 PF01546 Peptidase family M20/M25/M40 J4H94_RS13070 PF13847 Methyltransferase domain J4H94_RS13080 PF00313 'Cold-shock' DNA-binding domain J4H94_RS13095 PF00005 ABC transporter J4H94_RS13100 PF00583 Acetyltransferase (GNAT) family J4H94_RS13105 PF13302 Acetyltransferase (GNAT) domain J4H94_RS13110 PF00905 Penicillin binding protein transpeptidase domain J4H94_RS13125 PF01553 Acyltransferase J4H94_RS13130 PF00583 Acetyltransferase (GNAT) family J4H94_RS13140 PF13098 Thioredoxin-like domain J4H94_RS13145 PF00578 AhpC/TSA family J4H94_RS13155 PF00486 Transcriptional regulatory protein, C terminal J4H94_RS13155 PF00072 Response regulator receiver domain J4H94_RS13160 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS13160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS13160 PF08521 Two-component sensor kinase N-terminal J4H94_RS13165 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS13165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS13165 PF00672 HAMP domain J4H94_RS13170 PF00072 Response regulator receiver domain J4H94_RS13170 PF00486 Transcriptional regulatory protein, C terminal J4H94_RS13180 PF04945 YHS domain J4H94_RS13185 PF00403 Heavy-metal-associated domain J4H94_RS13200 PF07731 Multicopper oxidase J4H94_RS13200 PF07732 Multicopper oxidase J4H94_RS13200 PF00394 Multicopper oxidase J4H94_RS13210 PF05275 Copper resistance protein B precursor (CopB) J4H94_RS13230 PF03358 NADPH-dependent FMN reductase J4H94_RS13235 PF02678 Pirin J4H94_RS13235 PF17954 Quercetinase C-terminal cupin domain J4H94_RS13240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4H94_RS13245 PF00535 Glycosyl transferase family 2 J4H94_RS13250 PF04349 Periplasmic glucan biosynthesis protein, MdoG J4H94_RS13255 PF01915 Glycosyl hydrolase family 3 C-terminal domain J4H94_RS13255 PF00933 Glycosyl hydrolase family 3 N terminal domain J4H94_RS13255 PF14310 Fibronectin type III-like domain J4H94_RS13260 PF02567 Phenazine biosynthesis-like protein J4H94_RS13265 PF04172 LrgB-like family J4H94_RS13270 PF03788 LrgA family J4H94_RS13275 PF12801 4Fe-4S binding domain J4H94_RS13275 PF13746 4Fe-4S dicluster domain J4H94_RS13275 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase J4H94_RS13280 PF00155 Aminotransferase class I and II J4H94_RS13280 PF00392 Bacterial regulatory proteins, gntR family J4H94_RS13285 PF03707 Bacterial signalling protein N terminal repeat J4H94_RS13285 PF00563 EAL domain J4H94_RS13285 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS13295 PF13417 Glutathione S-transferase, N-terminal domain J4H94_RS13300 PF00440 Bacterial regulatory proteins, tetR family J4H94_RS13305 PF00873 AcrB/AcrD/AcrF family J4H94_RS13310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4H94_RS13315 PF08361 MAATS-type transcriptional repressor, C-terminal region J4H94_RS13315 PF00440 Bacterial regulatory proteins, tetR family J4H94_RS13320 PF04445 Putative SAM-dependent methyltransferase J4H94_RS13340 PF00814 Glycoprotease family J4H94_RS13345 PF05191 Adenylate kinase, active site lid J4H94_RS13350 PF00311 Phosphoenolpyruvate carboxylase J4H94_RS13365 PF01389 OmpA-like transmembrane domain J4H94_RS13365 PF00691 OmpA family J4H94_RS13390 PF01336 OB-fold nucleic acid binding domain J4H94_RS13390 PF00152 tRNA synthetases class II (D, K and N) J4H94_RS13405 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4H94_RS13410 PF01568 Molydopterin dinucleotide binding domain J4H94_RS13410 PF00384 Molybdopterin oxidoreductase J4H94_RS13410 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4H94_RS13415 PF02272 DHHA1 domain J4H94_RS13415 PF17768 RecJ OB domain J4H94_RS13415 PF01368 DHH family J4H94_RS13420 PF03746 LamB/YcsF family J4H94_RS13425 PF02682 Carboxyltransferase domain, subdomain C and D J4H94_RS13430 PF02626 Carboxyltransferase domain, subdomain A and B J4H94_RS13435 PF07152 YaeQ protein J4H94_RS13440 PF00072 Response regulator receiver domain J4H94_RS13440 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS13445 PF04324 BFD-like [2Fe-2S] binding domain J4H94_RS13450 PF00210 Ferritin-like domain J4H94_RS13455 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J4H94_RS13455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4H94_RS13470 PF04381 Putative exonuclease, RdgC J4H94_RS13475 PF07690 Major Facilitator Superfamily J4H94_RS13495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS13495 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS13500 PF13194 Domain of unknown function (DUF4010) J4H94_RS13505 PF02646 RmuC family J4H94_RS13520 PF13617 YnbE-like lipoprotein J4H94_RS13535 PF00136 DNA polymerase family B J4H94_RS13535 PF03104 DNA polymerase family B, exonuclease domain J4H94_RS13545 PF01259 SAICAR synthetase J4H94_RS13555 PF00701 Dihydrodipicolinate synthetase family J4H94_RS13565 PF00578 AhpC/TSA family J4H94_RS13570 PF01594 AI-2E family transporter J4H94_RS13575 PF01206 Sulfurtransferase TusA J4H94_RS13580 PF01435 Peptidase family M48 J4H94_RS13585 PF02445 Quinolinate synthetase A protein J4H94_RS13590 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain J4H94_RS13590 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain J4H94_RS13600 PF06508 Queuosine biosynthesis protein QueC J4H94_RS13605 PF04055 Radical SAM superfamily J4H94_RS13610 PF16331 TolA binding protein trimerisation J4H94_RS13610 PF13525 Outer membrane lipoprotein J4H94_RS13615 PF00691 OmpA family J4H94_RS13620 PF07676 WD40-like Beta Propeller Repeat J4H94_RS13620 PF04052 TolB amino-terminal domain J4H94_RS13630 PF02472 Biopolymer transport protein ExbD/TolR J4H94_RS13635 PF01618 MotA/TolQ/ExbB proton channel family J4H94_RS13640 PF03061 Thioesterase superfamily J4H94_RS13645 PF17864 RuvB AAA lid domain J4H94_RS13645 PF05491 RuvB C-terminal winged helix domain J4H94_RS13645 PF05496 Holliday junction DNA helicase RuvB P-loop domain J4H94_RS13650 PF07499 RuvA, C-terminal domain J4H94_RS13650 PF01330 RuvA N terminal domain J4H94_RS13655 PF02075 Crossover junction endodeoxyribonuclease RuvC J4H94_RS13660 PF01709 Transcriptional regulator J4H94_RS13665 PF02938 GAD domain J4H94_RS13665 PF00152 tRNA synthetases class II (D, K and N) J4H94_RS13665 PF01336 OB-fold nucleic acid binding domain J4H94_RS13670 PF00210 Ferritin-like domain J4H94_RS13675 PF00313 'Cold-shock' DNA-binding domain J4H94_RS13680 PF04102 SlyX J4H94_RS13690 PF03573 outer membrane porin, OprD family J4H94_RS13695 PF03129 Anticodon binding domain J4H94_RS13695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4H94_RS13695 PF04073 Aminoacyl-tRNA editing domain J4H94_RS13710 PF00578 AhpC/TSA family J4H94_RS13725 PF03631 Virulence factor BrkB J4H94_RS13730 PF03960 ArsC family J4H94_RS13735 PF03358 NADPH-dependent FMN reductase J4H94_RS13745 PF00308 Bacterial dnaA protein J4H94_RS13750 PF01594 AI-2E family transporter J4H94_RS13760 PF00586 AIR synthase related protein, N-terminal domain J4H94_RS13760 PF02769 AIR synthase related protein, C-terminal domain J4H94_RS13765 PF00551 Formyl transferase J4H94_RS13780 PF00155 Aminotransferase class I and II J4H94_RS13800 PF03960 ArsC family J4H94_RS13805 PF14602 Hexapeptide repeat of succinyl-transferase J4H94_RS13805 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle J4H94_RS13810 PF00266 Aminotransferase class-V J4H94_RS13815 PF02657 Fe-S metabolism associated domain J4H94_RS13820 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J4H94_RS13820 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J4H94_RS13825 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4H94_RS13830 PF00034 Cytochrome c J4H94_RS13840 PF12843 Putative quorum-sensing-regulated virulence factor J4H94_RS13845 PF00023 Ankyrin repeat J4H94_RS13845 PF12796 Ankyrin repeats (3 copies) J4H94_RS13855 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS13855 PF05230 MASE2 domain J4H94_RS13860 PF04073 Aminoacyl-tRNA editing domain J4H94_RS13865 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J4H94_RS13865 PF01266 FAD dependent oxidoreductase J4H94_RS13870 PF08267 Cobalamin-independent synthase, N-terminal domain J4H94_RS13870 PF01717 Cobalamin-independent synthase, Catalytic domain J4H94_RS13875 PF06055 Exopolysaccharide synthesis, ExoD J4H94_RS13880 PF03466 LysR substrate binding domain J4H94_RS13880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS13885 PF00106 short chain dehydrogenase J4H94_RS13895 PF01810 LysE type translocator J4H94_RS13915 PF03783 Curli production assembly/transport component CsgG J4H94_RS13935 PF08362 YcdC-like protein, C-terminal region J4H94_RS13935 PF00440 Bacterial regulatory proteins, tetR family J4H94_RS13940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS13940 PF03466 LysR substrate binding domain J4H94_RS13945 PF08443 RimK-like ATP-grasp domain J4H94_RS13945 PF18030 RimK PreATP-grasp domain J4H94_RS13950 PF02926 THUMP domain J4H94_RS13950 PF01170 Putative RNA methylase family UPF0020 J4H94_RS13950 PF10672 S-adenosylmethionine-dependent methyltransferase J4H94_RS13955 PF10996 Beta-Casp domain J4H94_RS13955 PF00753 Metallo-beta-lactamase superfamily J4H94_RS13955 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J4H94_RS13965 PF14765 Polyketide synthase dehydratase J4H94_RS13965 PF00550 Phosphopantetheine attachment site J4H94_RS13965 PF08659 KR domain J4H94_RS13965 PF02801 Beta-ketoacyl synthase, C-terminal domain J4H94_RS13965 PF00109 Beta-ketoacyl synthase, N-terminal domain J4H94_RS13965 PF16197 Ketoacyl-synthetase C-terminal extension J4H94_RS13965 PF00698 Acyl transferase domain J4H94_RS13965 PF08240 Alcohol dehydrogenase GroES-like domain J4H94_RS13975 PF02954 Bacterial regulatory protein, Fis family J4H94_RS13975 PF01590 GAF domain J4H94_RS13975 PF00158 Sigma-54 interaction domain J4H94_RS13985 PF05199 GMC oxidoreductase J4H94_RS13985 PF00732 GMC oxidoreductase J4H94_RS13990 PF00676 Dehydrogenase E1 component J4H94_RS13995 PF08240 Alcohol dehydrogenase GroES-like domain J4H94_RS13995 PF00107 Zinc-binding dehydrogenase J4H94_RS14000 PF02779 Transketolase, pyrimidine binding domain J4H94_RS14000 PF02780 Transketolase, C-terminal domain J4H94_RS14005 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4H94_RS14005 PF00364 Biotin-requiring enzyme J4H94_RS14005 PF02817 e3 binding domain J4H94_RS14010 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4H94_RS14010 PF00364 Biotin-requiring enzyme J4H94_RS14010 PF02817 e3 binding domain J4H94_RS14020 PF13360 PQQ-like domain J4H94_RS14020 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4H94_RS14025 PF04966 Carbohydrate-selective porin, OprB family J4H94_RS14035 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS14040 PF00005 ABC transporter J4H94_RS14045 PF07702 UTRA domain J4H94_RS14045 PF00392 Bacterial regulatory proteins, gntR family J4H94_RS14050 PF00890 FAD binding domain J4H94_RS14050 PF02910 Fumarate reductase flavoprotein C-term J4H94_RS14065 PF11953 Domain of unknown function (DUF3470) J4H94_RS14065 PF00037 4Fe-4S binding domain J4H94_RS14080 PF03601 Conserved hypothetical protein 698 J4H94_RS14085 PF00175 Oxidoreductase NAD-binding domain J4H94_RS14085 PF00970 Oxidoreductase FAD-binding domain J4H94_RS14095 PF00106 short chain dehydrogenase J4H94_RS14100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS14100 PF03466 LysR substrate binding domain J4H94_RS14105 PF02798 Glutathione S-transferase, N-terminal domain J4H94_RS14110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4H94_RS14115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS14115 PF03466 LysR substrate binding domain J4H94_RS14120 PF07660 Secretin and TonB N terminus short domain J4H94_RS14120 PF00593 TonB dependent receptor J4H94_RS14120 PF07715 TonB-dependent Receptor Plug Domain J4H94_RS14125 PF01810 LysE type translocator J4H94_RS14145 PF00072 Response regulator receiver domain J4H94_RS14145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS14145 PF13426 PAS domain J4H94_RS14160 PF06745 KaiC J4H94_RS14165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS14165 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS14165 PF00072 Response regulator receiver domain J4H94_RS14165 PF13188 PAS domain J4H94_RS14165 PF08448 PAS fold J4H94_RS14185 PF09084 NMT1/THI5 like J4H94_RS14190 PF00005 ABC transporter J4H94_RS14195 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS14205 PF00106 short chain dehydrogenase J4H94_RS14215 PF12833 Helix-turn-helix domain J4H94_RS14215 PF06719 AraC-type transcriptional regulator N-terminus J4H94_RS14220 PF00005 ABC transporter J4H94_RS14225 PF02653 Branched-chain amino acid transport system / permease component J4H94_RS14230 PF02653 Branched-chain amino acid transport system / permease component J4H94_RS14235 PF02661 Fic/DOC family J4H94_RS14250 PF00375 Sodium:dicarboxylate symporter family J4H94_RS14260 PF01131 DNA topoisomerase J4H94_RS14260 PF01751 Toprim domain J4H94_RS14265 PF01272 Transcription elongation factor, GreA/GreB, C-term J4H94_RS14265 PF03449 Transcription elongation factor, N-terminal J4H94_RS14275 PF03600 Citrate transporter J4H94_RS14275 PF02080 TrkA-C domain J4H94_RS14295 PF00672 HAMP domain J4H94_RS14295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS14300 PF07690 Major Facilitator Superfamily J4H94_RS14305 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J4H94_RS14310 PF00561 alpha/beta hydrolase fold J4H94_RS14310 PF00364 Biotin-requiring enzyme J4H94_RS14315 PF12729 Four helix bundle sensory module for signal transduction J4H94_RS14315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS14315 PF00672 HAMP domain J4H94_RS14330 PF02311 AraC-like ligand binding domain J4H94_RS14330 PF12833 Helix-turn-helix domain J4H94_RS14335 PF01810 LysE type translocator J4H94_RS14355 PF04286 Protein of unknown function (DUF445) J4H94_RS14360 PF00005 ABC transporter J4H94_RS14375 PF01230 HIT domain J4H94_RS14380 PF03475 3-alpha domain J4H94_RS14380 PF03473 MOSC domain J4H94_RS14395 PF03795 YCII-related domain J4H94_RS14415 PF00753 Metallo-beta-lactamase superfamily J4H94_RS14420 PF12697 Alpha/beta hydrolase family J4H94_RS14430 PF00069 Protein kinase domain J4H94_RS14430 PF03793 PASTA domain J4H94_RS14435 PF16697 Inner membrane component of T3SS, cytoplasmic domain J4H94_RS14450 PF00270 DEAD/DEAH box helicase J4H94_RS14450 PF11898 Domain of unknown function (DUF3418) J4H94_RS14450 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J4H94_RS14450 PF00271 Helicase conserved C-terminal domain J4H94_RS14450 PF04408 Helicase associated domain (HA2) J4H94_RS14455 PF04389 Peptidase family M28 J4H94_RS14455 PF02225 PA domain J4H94_RS14460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS14460 PF00672 HAMP domain J4H94_RS14460 PF17200 Single Cache domain 2 J4H94_RS14465 PF00672 HAMP domain J4H94_RS14465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS14465 PF17200 Single Cache domain 2 J4H94_RS14470 PF00501 AMP-binding enzyme J4H94_RS14470 PF13193 AMP-binding enzyme C-terminal domain J4H94_RS14475 PF00501 AMP-binding enzyme J4H94_RS14475 PF13193 AMP-binding enzyme C-terminal domain J4H94_RS14480 PF01575 MaoC like domain J4H94_RS14485 PF03714 Bacterial pullanase-associated domain J4H94_RS14485 PF18494 Pullulanase Ins domain J4H94_RS14485 PF17967 Pullulanase N2 domain J4H94_RS14485 PF11852 Domain of unknown function (DUF3372) J4H94_RS14485 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J4H94_RS14505 PF12137 RNA polymerase recycling family C-terminal J4H94_RS14505 PF00176 SNF2 family N-terminal domain J4H94_RS14505 PF18339 RapA N-terminal Tudor like domain 1 J4H94_RS14505 PF18337 RapA N-terminal Tudor like domain J4H94_RS14505 PF00271 Helicase conserved C-terminal domain J4H94_RS14515 PF00012 Hsp70 protein J4H94_RS14520 PF07690 Major Facilitator Superfamily J4H94_RS14525 PF01261 Xylose isomerase-like TIM barrel J4H94_RS14530 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4H94_RS14530 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4H94_RS14535 PF02673 Bacitracin resistance protein BacA J4H94_RS14545 PF00005 ABC transporter J4H94_RS14550 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS14555 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS14565 PF13458 Periplasmic binding protein J4H94_RS14570 PF02653 Branched-chain amino acid transport system / permease component J4H94_RS14575 PF11862 Domain of unknown function (DUF3382) J4H94_RS14575 PF02653 Branched-chain amino acid transport system / permease component J4H94_RS14580 PF12399 Branched-chain amino acid ATP-binding cassette transporter J4H94_RS14580 PF00005 ABC transporter J4H94_RS14585 PF00005 ABC transporter J4H94_RS14625 PF00114 Pilin (bacterial filament) J4H94_RS14625 PF07963 Prokaryotic N-terminal methylation motif J4H94_RS14630 PF00114 Pilin (bacterial filament) J4H94_RS14630 PF07963 Prokaryotic N-terminal methylation motif J4H94_RS14635 PF07963 Prokaryotic N-terminal methylation motif J4H94_RS14640 PF00482 Type II secretion system (T2SS), protein F J4H94_RS14645 PF00437 Type II/IV secretion system protein J4H94_RS14655 PF13401 AAA domain J4H94_RS14655 PF01471 Putative peptidoglycan binding domain J4H94_RS14660 PF00263 Bacterial type II and III secretion system protein J4H94_RS14660 PF03958 Bacterial type II/III secretion system short domain J4H94_RS14685 PF11798 IMS family HHH motif J4H94_RS14685 PF00817 impB/mucB/samB family J4H94_RS14720 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4H94_RS14725 PF04851 Type III restriction enzyme, res subunit J4H94_RS14725 PF02151 UvrB/uvrC motif J4H94_RS14725 PF12344 Ultra-violet resistance protein B J4H94_RS14725 PF17757 UvrB interaction domain J4H94_RS14725 PF00271 Helicase conserved C-terminal domain J4H94_RS14730 PF00155 Aminotransferase class I and II J4H94_RS14745 PF00462 Glutaredoxin J4H94_RS14750 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4H94_RS14750 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4H94_RS14755 PF00005 ABC transporter J4H94_RS14755 PF08402 TOBE domain J4H94_RS14760 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4H94_RS14765 PF07732 Multicopper oxidase J4H94_RS14765 PF00394 Multicopper oxidase J4H94_RS14765 PF07731 Multicopper oxidase J4H94_RS14770 PF00117 Glutamine amidotransferase class-I J4H94_RS14770 PF02540 NAD synthase J4H94_RS14770 PF00958 GMP synthase C terminal domain J4H94_RS14775 PF00478 IMP dehydrogenase / GMP reductase domain J4H94_RS14775 PF00571 CBS domain J4H94_RS14785 PF13742 OB-fold nucleic acid binding domain J4H94_RS14785 PF02601 Exonuclease VII, large subunit J4H94_RS14790 PF08525 Opacity-associated protein A N-terminal motif J4H94_RS14790 PF01551 Peptidase family M23 J4H94_RS14790 PF01476 LysM domain J4H94_RS14795 PF00857 Isochorismatase family J4H94_RS14800 PF00924 Mechanosensitive ion channel J4H94_RS14815 PF00682 HMGL-like J4H94_RS14815 PF08502 LeuA allosteric (dimerisation) domain J4H94_RS14820 PF00107 Zinc-binding dehydrogenase J4H94_RS14820 PF08240 Alcohol dehydrogenase GroES-like domain J4H94_RS14825 PF00892 EamA-like transporter family J4H94_RS14830 PF04231 Endonuclease I J4H94_RS14835 PF09997 Predicted membrane protein (DUF2238) J4H94_RS14845 PF00795 Carbon-nitrogen hydrolase J4H94_RS14850 PF00155 Aminotransferase class I and II J4H94_RS14855 PF00132 Bacterial transferase hexapeptide (six repeats) J4H94_RS14855 PF06426 Serine acetyltransferase, N-terminal J4H94_RS14860 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J4H94_RS14860 PF01926 50S ribosome-binding GTPase J4H94_RS14865 PF13360 PQQ-like domain J4H94_RS14870 PF09976 Tetratricopeptide repeat-like domain J4H94_RS14875 PF03129 Anticodon binding domain J4H94_RS14875 PF13393 Histidyl-tRNA synthetase J4H94_RS14880 PF04551 GcpE protein J4H94_RS14895 PF04055 Radical SAM superfamily J4H94_RS14900 PF00334 Nucleoside diphosphate kinase J4H94_RS14905 PF04384 Iron-sulphur cluster assembly J4H94_RS14910 PF00111 2Fe-2S iron-sulfur cluster binding domain J4H94_RS14915 PF00012 Hsp70 protein J4H94_RS14920 PF00226 DnaJ domain J4H94_RS14920 PF07743 HSCB C-terminal oligomerisation domain J4H94_RS14925 PF01521 Iron-sulphur cluster biosynthesis J4H94_RS14930 PF01592 NifU-like N terminal domain J4H94_RS14935 PF00266 Aminotransferase class-V J4H94_RS14940 PF02082 Transcriptional regulator J4H94_RS14945 PF00132 Bacterial transferase hexapeptide (six repeats) J4H94_RS14950 PF00588 SpoU rRNA Methylase family J4H94_RS14955 PF00459 Inositol monophosphatase family J4H94_RS14960 PF05433 Glycine zipper 2TM domain J4H94_RS14965 PF02355 Protein export membrane protein J4H94_RS14965 PF07549 SecD/SecF GG Motif J4H94_RS14970 PF02355 Protein export membrane protein J4H94_RS14970 PF07549 SecD/SecF GG Motif J4H94_RS14970 PF13721 SecD export protein N-terminal TM region J4H94_RS14975 PF02699 Preprotein translocase subunit J4H94_RS14980 PF01702 Queuine tRNA-ribosyltransferase J4H94_RS14985 PF02547 Queuosine biosynthesis protein J4H94_RS15050 PF00313 'Cold-shock' DNA-binding domain J4H94_RS15060 PF03739 Lipopolysaccharide export system permease LptF/LptG J4H94_RS15065 PF03739 Lipopolysaccharide export system permease LptF/LptG J4H94_RS15075 PF04364 DNA polymerase III chi subunit, HolC J4H94_RS15085 PF10458 Valyl tRNA synthetase tRNA binding arm J4H94_RS15085 PF00133 tRNA synthetases class I (I, L, M and V) J4H94_RS15085 PF08264 Anticodon-binding domain of tRNA J4H94_RS15090 PF03600 Citrate transporter J4H94_RS15100 PF03600 Citrate transporter J4H94_RS15100 PF02080 TrkA-C domain J4H94_RS15105 PF06779 Uncharacterised MFS-type transporter YbfB J4H94_RS15110 PF05971 RNA methyltransferase J4H94_RS15125 PF04245 37-kD nucleoid-associated bacterial protein J4H94_RS15130 PF03976 Polyphosphate kinase 2 (PPK2) J4H94_RS15145 PF01541 GIY-YIG catalytic domain J4H94_RS15150 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4H94_RS15150 PF01464 Transglycosylase SLT domain J4H94_RS15155 PF00689 Cation transporting ATPase, C-terminus J4H94_RS15155 PF00690 Cation transporter/ATPase, N-terminus J4H94_RS15165 PF01979 Amidohydrolase family J4H94_RS15170 PF02608 ABC transporter substrate-binding protein PnrA-like J4H94_RS15175 PF14226 non-haem dioxygenase in morphine synthesis N-terminal J4H94_RS15175 PF03171 2OG-Fe(II) oxygenase superfamily J4H94_RS15180 PF01799 [2Fe-2S] binding domain J4H94_RS15180 PF00111 2Fe-2S iron-sulfur cluster binding domain J4H94_RS15185 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J4H94_RS15185 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J4H94_RS15195 PF01979 Amidohydrolase family J4H94_RS15200 PF01297 Zinc-uptake complex component A periplasmic J4H94_RS15205 PF00950 ABC 3 transport family J4H94_RS15210 PF00005 ABC transporter J4H94_RS15215 PF00392 Bacterial regulatory proteins, gntR family J4H94_RS15215 PF07729 FCD domain J4H94_RS15220 PF00860 Permease family J4H94_RS15230 PF00576 HIUase/Transthyretin family J4H94_RS15235 PF01522 Polysaccharide deacetylase J4H94_RS15240 PF01014 Uricase J4H94_RS15240 PF09349 OHCU decarboxylase J4H94_RS15245 PF03561 Allantoicase repeat J4H94_RS15250 PF04115 Ureidoglycolate lyase J4H94_RS15260 PF00860 Permease family J4H94_RS15265 PF02254 TrkA-N domain J4H94_RS15265 PF00999 Sodium/hydrogen exchanger family J4H94_RS15270 PF00860 Permease family J4H94_RS15285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS15285 PF00672 HAMP domain J4H94_RS15285 PF02743 Cache domain J4H94_RS15290 PF08362 YcdC-like protein, C-terminal region J4H94_RS15290 PF00440 Bacterial regulatory proteins, tetR family J4H94_RS15300 PF00563 EAL domain J4H94_RS15310 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS15310 PF00672 HAMP domain J4H94_RS15310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS15315 PF00072 Response regulator receiver domain J4H94_RS15315 PF00486 Transcriptional regulatory protein, C terminal J4H94_RS15325 PF00576 HIUase/Transthyretin family J4H94_RS15330 PF03466 LysR substrate binding domain J4H94_RS15330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS15335 PF00205 Thiamine pyrophosphate enzyme, central domain J4H94_RS15335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4H94_RS15335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4H94_RS15340 PF01261 Xylose isomerase-like TIM barrel J4H94_RS15345 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4H94_RS15345 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4H94_RS15350 PF13660 Domain of unknown function (DUF4147) J4H94_RS15350 PF05161 MOFRL family J4H94_RS15355 PF02887 Pyruvate kinase, alpha/beta domain J4H94_RS15355 PF00224 Pyruvate kinase, barrel domain J4H94_RS15370 PF00175 Oxidoreductase NAD-binding domain J4H94_RS15370 PF00042 Globin J4H94_RS15370 PF00970 Oxidoreductase FAD-binding domain J4H94_RS15380 PF13936 Helix-turn-helix domain J4H94_RS15380 PF00665 Integrase core domain J4H94_RS15390 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J4H94_RS15390 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J4H94_RS15395 PF17151 Periplasmic sensor domain J4H94_RS15395 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS15400 PF00657 GDSL-like Lipase/Acylhydrolase J4H94_RS15400 PF03797 Autotransporter beta-domain J4H94_RS15415 PF03466 LysR substrate binding domain J4H94_RS15415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS15420 PF01810 LysE type translocator J4H94_RS15425 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J4H94_RS15425 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J4H94_RS15430 PF03707 Bacterial signalling protein N terminal repeat J4H94_RS15430 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS15430 PF00563 EAL domain J4H94_RS15440 PF04011 LemA family J4H94_RS15465 PF00672 HAMP domain J4H94_RS15465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS15470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4H94_RS15475 PF00873 AcrB/AcrD/AcrF family J4H94_RS15485 PF00118 TCP-1/cpn60 chaperonin family J4H94_RS15490 PF00166 Chaperonin 10 Kd subunit J4H94_RS15495 PF04186 FxsA cytoplasmic membrane protein J4H94_RS15520 PF07690 Major Facilitator Superfamily J4H94_RS15525 PF05552 Conserved TM helix J4H94_RS15525 PF00924 Mechanosensitive ion channel J4H94_RS15530 PF04461 Protein of unknown function (DUF520) J4H94_RS15535 PF00072 Response regulator receiver domain J4H94_RS15540 PF08546 Ketopantoate reductase PanE/ApbA C terminal J4H94_RS15540 PF02558 Ketopantoate reductase PanE/ApbA J4H94_RS15545 PF00072 Response regulator receiver domain J4H94_RS15545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS15545 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS15545 PF08448 PAS fold J4H94_RS15545 PF13188 PAS domain J4H94_RS15550 PF01923 Cobalamin adenosyltransferase J4H94_RS15570 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4H94_RS15570 PF13192 Thioredoxin domain J4H94_RS15575 PF00578 AhpC/TSA family J4H94_RS15575 PF10417 C-terminal domain of 1-Cys peroxiredoxin J4H94_RS15580 PF00293 NUDIX domain J4H94_RS15585 PF01960 ArgJ family J4H94_RS15590 PF07517 SecA DEAD-like domain J4H94_RS15590 PF01043 SecA preprotein cross-linking domain J4H94_RS15590 PF02810 SEC-C motif J4H94_RS15590 PF07516 SecA Wing and Scaffold domain J4H94_RS15615 PF00196 Bacterial regulatory proteins, luxR family J4H94_RS15620 PF07044 Protein of unknown function (DUF1329) J4H94_RS15630 PF00156 Phosphoribosyl transferase domain J4H94_RS15640 PF00860 Permease family J4H94_RS15650 PF09411 Lipid A 3-O-deacylase (PagL) J4H94_RS15655 PF01177 Asp/Glu/Hydantoin racemase J4H94_RS15660 PF00899 ThiF family J4H94_RS15665 PF17827 PrmC N-terminal domain J4H94_RS15665 PF05175 Methyltransferase small domain J4H94_RS15670 PF03462 PCRF domain J4H94_RS15670 PF00472 RF-1 domain J4H94_RS15675 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J4H94_RS15675 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J4H94_RS15675 PF01488 Shikimate / quinate 5-dehydrogenase J4H94_RS15685 PF03550 Outer membrane lipoprotein LolB J4H94_RS15690 PF08544 GHMP kinases C terminal J4H94_RS15690 PF00288 GHMP kinases N terminal domain J4H94_RS15705 PF14572 Phosphoribosyl synthetase-associated domain J4H94_RS15705 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J4H94_RS15710 PF01386 Ribosomal L25p family J4H94_RS15710 PF14693 Ribosomal protein TL5, C-terminal domain J4H94_RS15715 PF01195 Peptidyl-tRNA hydrolase J4H94_RS15720 PF06071 Protein of unknown function (DUF933) J4H94_RS15720 PF01926 50S ribosome-binding GTPase J4H94_RS15735 PF02653 Branched-chain amino acid transport system / permease component J4H94_RS15745 PF00005 ABC transporter J4H94_RS15750 PF12399 Branched-chain amino acid ATP-binding cassette transporter J4H94_RS15750 PF00005 ABC transporter J4H94_RS15755 PF03573 outer membrane porin, OprD family J4H94_RS15765 PF00501 AMP-binding enzyme J4H94_RS15765 PF13193 AMP-binding enzyme C-terminal domain J4H94_RS15770 PF03851 UV-endonuclease UvdE J4H94_RS15775 PF02770 Acyl-CoA dehydrogenase, middle domain J4H94_RS15775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4H94_RS15775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4H94_RS15780 PF01039 Carboxyl transferase domain J4H94_RS15785 PF00378 Enoyl-CoA hydratase/isomerase J4H94_RS15790 PF02785 Biotin carboxylase C-terminal domain J4H94_RS15790 PF00289 Biotin carboxylase, N-terminal domain J4H94_RS15790 PF00364 Biotin-requiring enzyme J4H94_RS15790 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4H94_RS15795 PF00682 HMGL-like J4H94_RS15800 PF01144 Coenzyme A transferase J4H94_RS15805 PF01144 Coenzyme A transferase J4H94_RS15810 PF02803 Thiolase, C-terminal domain J4H94_RS15810 PF00108 Thiolase, N-terminal domain J4H94_RS15815 PF13411 MerR HTH family regulatory protein J4H94_RS15820 PF03480 Bacterial extracellular solute-binding protein, family 7 J4H94_RS15830 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4H94_RS15835 PF02954 Bacterial regulatory protein, Fis family J4H94_RS15835 PF00158 Sigma-54 interaction domain J4H94_RS15835 PF13185 GAF domain J4H94_RS15845 PF07519 Tannase and feruloyl esterase J4H94_RS15850 PF03573 outer membrane porin, OprD family J4H94_RS15875 PF00892 EamA-like transporter family J4H94_RS15880 PF00484 Carbonic anhydrase J4H94_RS15885 PF00982 Glycosyltransferase family 20 J4H94_RS15890 PF02358 Trehalose-phosphatase J4H94_RS15900 PF00583 Acetyltransferase (GNAT) family J4H94_RS15910 PF00682 HMGL-like J4H94_RS15910 PF08502 LeuA allosteric (dimerisation) domain J4H94_RS15915 PF16653 Saccharopine dehydrogenase C-terminal domain J4H94_RS15915 PF03435 Saccharopine dehydrogenase NADP binding domain J4H94_RS15920 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J4H94_RS15940 PF02470 MlaD protein J4H94_RS15945 PF04403 Paraquat-inducible protein A J4H94_RS15950 PF04403 Paraquat-inducible protein A J4H94_RS15980 PF01794 Ferric reductase like transmembrane component J4H94_RS15985 PF00174 Oxidoreductase molybdopterin binding domain J4H94_RS15990 PF01066 CDP-alcohol phosphatidyltransferase J4H94_RS15995 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J4H94_RS15995 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J4H94_RS16000 PF10369 Small subunit of acetolactate synthase J4H94_RS16005 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4H94_RS16005 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4H94_RS16005 PF00205 Thiamine pyrophosphate enzyme, central domain J4H94_RS16015 PF00849 RNA pseudouridylate synthase J4H94_RS16015 PF04287 tRNA pseudouridine synthase C J4H94_RS16025 PF14814 Bifunctional transglycosylase second domain J4H94_RS16025 PF00912 Transglycosylase J4H94_RS16025 PF00905 Penicillin binding protein transpeptidase domain J4H94_RS16035 PF08241 Methyltransferase domain J4H94_RS16055 PF00005 ABC transporter J4H94_RS16060 PF01032 FecCD transport family J4H94_RS16070 PF11412 Disulphide bond corrector protein DsbC J4H94_RS16070 PF02683 Cytochrome C biogenesis protein transmembrane region J4H94_RS16075 PF01220 Dehydroquinase class II J4H94_RS16080 PF00364 Biotin-requiring enzyme J4H94_RS16085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4H94_RS16085 PF00289 Biotin carboxylase, N-terminal domain J4H94_RS16085 PF02785 Biotin carboxylase C-terminal domain J4H94_RS16100 PF01207 Dihydrouridine synthase (Dus) J4H94_RS16105 PF02954 Bacterial regulatory protein, Fis family J4H94_RS16110 PF01808 AICARFT/IMPCHase bienzyme J4H94_RS16110 PF02142 MGS-like domain J4H94_RS16115 PF02843 Phosphoribosylglycinamide synthetase, C domain J4H94_RS16115 PF02844 Phosphoribosylglycinamide synthetase, N domain J4H94_RS16115 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J4H94_RS16120 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4H94_RS16120 PF00672 HAMP domain J4H94_RS16120 PF00072 Response regulator receiver domain J4H94_RS16120 PF01627 Hpt domain J4H94_RS16120 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS16120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS16125 PF00067 Cytochrome P450 J4H94_RS16130 PF03706 Lysylphosphatidylglycerol synthase TM region J4H94_RS16140 PF03547 Membrane transport protein J4H94_RS16145 PF04321 RmlD substrate binding domain J4H94_RS16150 PF03749 Sugar fermentation stimulation protein RE domain J4H94_RS16150 PF17746 SfsA N-terminal OB domain J4H94_RS16155 PF00155 Aminotransferase class I and II J4H94_RS16160 PF01258 Prokaryotic dksA/traR C4-type zinc finger J4H94_RS16165 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4H94_RS16175 PF00989 PAS fold J4H94_RS16175 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS16175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS16180 PF02954 Bacterial regulatory protein, Fis family J4H94_RS16180 PF00072 Response regulator receiver domain J4H94_RS16180 PF00158 Sigma-54 interaction domain J4H94_RS16185 PF01743 Poly A polymerase head domain J4H94_RS16185 PF12626 Polymerase A arginine-rich C-terminus J4H94_RS16185 PF12627 Probable RNA and SrmB- binding site of polymerase A J4H94_RS16190 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J4H94_RS16195 PF02548 Ketopantoate hydroxymethyltransferase J4H94_RS16200 PF02569 Pantoate-beta-alanine ligase J4H94_RS16205 PF02261 Aspartate decarboxylase J4H94_RS16210 PF00342 Phosphoglucose isomerase J4H94_RS16235 PF04972 BON domain J4H94_RS16240 PF00013 KH domain J4H94_RS16240 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J4H94_RS16240 PF01138 3' exoribonuclease family, domain 1 J4H94_RS16240 PF03725 3' exoribonuclease family, domain 2 J4H94_RS16240 PF00575 S1 RNA binding domain J4H94_RS16245 PF00312 Ribosomal protein S15 J4H94_RS16250 PF01509 TruB family pseudouridylate synthase (N terminal domain) J4H94_RS16250 PF09157 Pseudouridine synthase II TruB, C-terminal J4H94_RS16250 PF16198 tRNA pseudouridylate synthase B C-terminal domain J4H94_RS16255 PF02033 Ribosome-binding factor A J4H94_RS16260 PF00009 Elongation factor Tu GTP binding domain J4H94_RS16260 PF11987 Translation-initiation factor 2 J4H94_RS16260 PF08364 Bacterial translation initiation factor IF-2 associated region J4H94_RS16260 PF04760 Translation initiation factor IF-2, N-terminal region J4H94_RS16265 PF13184 NusA-like KH domain J4H94_RS16265 PF08529 NusA N-terminal domain J4H94_RS16270 PF17384 RimP C-terminal SH3 domain J4H94_RS16270 PF02576 RimP N-terminal domain J4H94_RS16290 PF00121 Triosephosphate isomerase J4H94_RS16295 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4H94_RS16295 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4H94_RS16295 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4H94_RS16295 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4H94_RS16300 PF00809 Pterin binding enzyme J4H94_RS16305 PF01434 Peptidase family M41 J4H94_RS16305 PF06480 FtsH Extracellular J4H94_RS16305 PF00004 ATPase family associated with various cellular activities (AAA) J4H94_RS16305 PF17862 AAA+ lid domain J4H94_RS16310 PF01728 FtsJ-like methyltransferase J4H94_RS16315 PF01985 CRS1 / YhbY (CRM) domain J4H94_RS16325 PF01272 Transcription elongation factor, GreA/GreB, C-term J4H94_RS16325 PF03449 Transcription elongation factor, N-terminal J4H94_RS16330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4H94_RS16330 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J4H94_RS16330 PF02142 MGS-like domain J4H94_RS16335 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J4H94_RS16335 PF00117 Glutamine amidotransferase class-I J4H94_RS16340 PF05173 Dihydrodipicolinate reductase, C-terminus J4H94_RS16340 PF01113 Dihydrodipicolinate reductase, N-terminus J4H94_RS16345 PF00684 DnaJ central domain J4H94_RS16345 PF00226 DnaJ domain J4H94_RS16345 PF01556 DnaJ C terminal domain J4H94_RS16350 PF00012 Hsp70 protein J4H94_RS16355 PF01025 GrpE J4H94_RS16360 PF02463 RecF/RecN/SMC N terminal domain J4H94_RS16365 PF01475 Ferric uptake regulator family J4H94_RS16370 PF04355 SmpA / OmlA family J4H94_RS16375 PF03658 RnfH family Ubiquitin J4H94_RS16380 PF03364 Polyketide cyclase / dehydrase and lipid transport J4H94_RS16385 PF01668 SmpB protein J4H94_RS16390 PF07729 FCD domain J4H94_RS16390 PF00392 Bacterial regulatory proteins, gntR family J4H94_RS16395 PF02652 L-lactate permease J4H94_RS16400 PF02754 Cysteine-rich domain J4H94_RS16405 PF11870 Domain of unknown function (DUF3390) J4H94_RS16405 PF13183 4Fe-4S dicluster domain J4H94_RS16405 PF02589 LUD domain J4H94_RS16410 PF02589 LUD domain J4H94_RS16445 PF11799 impB/mucB/samB family C-terminal domain J4H94_RS16445 PF13438 Domain of unknown function (DUF4113) J4H94_RS16445 PF00817 impB/mucB/samB family J4H94_RS16450 PF00717 Peptidase S24-like J4H94_RS16455 PF02586 SOS response associated peptidase (SRAP) J4H94_RS16505 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS16505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS16505 PF00672 HAMP domain J4H94_RS16510 PF00072 Response regulator receiver domain J4H94_RS16510 PF00486 Transcriptional regulatory protein, C terminal J4H94_RS16515 PF03573 outer membrane porin, OprD family J4H94_RS16520 PF02321 Outer membrane efflux protein J4H94_RS16525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4H94_RS16525 PF00529 HlyD membrane-fusion protein of T1SS J4H94_RS16530 PF00873 AcrB/AcrD/AcrF family J4H94_RS16540 PF16916 Dimerisation domain of Zinc Transporter J4H94_RS16540 PF01545 Cation efflux family J4H94_RS16550 PF09278 MerR, DNA binding J4H94_RS16550 PF00376 MerR family regulatory protein J4H94_RS16555 PF02411 MerT mercuric transport protein J4H94_RS16560 PF00403 Heavy-metal-associated domain J4H94_RS16570 PF13700 Domain of unknown function (DUF4158) J4H94_RS16570 PF01526 Tn3 transposase DDE domain J4H94_RS16590 PF13936 Helix-turn-helix domain J4H94_RS16590 PF00665 Integrase core domain J4H94_RS16605 PF00486 Transcriptional regulatory protein, C terminal J4H94_RS16605 PF00072 Response regulator receiver domain J4H94_RS16615 PF07732 Multicopper oxidase J4H94_RS16615 PF07731 Multicopper oxidase J4H94_RS16615 PF00394 Multicopper oxidase J4H94_RS16625 PF05275 Copper resistance protein B precursor (CopB) J4H94_RS16645 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS16645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS16645 PF00672 HAMP domain J4H94_RS16665 PF00873 AcrB/AcrD/AcrF family J4H94_RS16670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4H94_RS16685 PF04945 YHS domain J4H94_RS16710 PF02899 Phage integrase, N-terminal SAM-like domain J4H94_RS16710 PF00589 Phage integrase family J4H94_RS16745 PF07411 Domain of unknown function (DUF1508) J4H94_RS16765 PF01810 LysE type translocator J4H94_RS16770 PF00072 Response regulator receiver domain J4H94_RS16770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS16770 PF13426 PAS domain J4H94_RS16775 PF00005 ABC transporter J4H94_RS16775 PF17912 MalK OB fold domain J4H94_RS16780 PF00128 Alpha amylase, catalytic domain J4H94_RS16785 PF12464 Maltose acetyltransferase J4H94_RS16785 PF14602 Hexapeptide repeat of succinyl-transferase J4H94_RS16790 PF13417 Glutathione S-transferase, N-terminal domain J4H94_RS16795 PF00196 Bacterial regulatory proteins, luxR family J4H94_RS16795 PF17874 MalT-like TPR region J4H94_RS16800 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS16805 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS16805 PF14785 Maltose transport system permease protein MalF P2 domain J4H94_RS16810 PF01547 Bacterial extracellular solute-binding protein J4H94_RS16825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS16825 PF00672 HAMP domain J4H94_RS16830 PF00128 Alpha amylase, catalytic domain J4H94_RS16830 PF09081 Domain of unknown function (DUF1921) J4H94_RS16830 PF00686 Starch binding domain J4H94_RS16835 PF02264 LamB porin J4H94_RS16840 PF07148 Maltose operon periplasmic protein precursor (MalM) J4H94_RS16845 PF01547 Bacterial extracellular solute-binding protein J4H94_RS16850 PF00893 Small Multidrug Resistance protein J4H94_RS16855 PF00248 Aldo/keto reductase family J4H94_RS16860 PF00171 Aldehyde dehydrogenase family J4H94_RS16865 PF01081 KDPG and KHG aldolase J4H94_RS16870 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J4H94_RS16875 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J4H94_RS16875 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J4H94_RS16880 PF01380 SIS domain J4H94_RS16880 PF01418 Helix-turn-helix domain, rpiR family J4H94_RS16885 PF02685 Glucokinase J4H94_RS16890 PF00920 Dehydratase family J4H94_RS16900 PF07690 Major Facilitator Superfamily J4H94_RS16905 PF10634 Fe2+ transport protein J4H94_RS16925 PF04055 Radical SAM superfamily J4H94_RS16935 PF00317 Ribonucleotide reductase, all-alpha domain J4H94_RS16935 PF03477 ATP cone domain J4H94_RS16935 PF02867 Ribonucleotide reductase, barrel domain J4H94_RS16940 PF00027 Cyclic nucleotide-binding domain J4H94_RS16945 PF08859 DGC domain J4H94_RS16950 PF02036 SCP-2 sterol transfer family J4H94_RS16955 PF01136 Peptidase family U32 J4H94_RS16960 PF01136 Peptidase family U32 J4H94_RS16970 PF02954 Bacterial regulatory protein, Fis family J4H94_RS16970 PF00158 Sigma-54 interaction domain J4H94_RS16980 PF01814 Hemerythrin HHE cation binding domain J4H94_RS16980 PF04405 Domain of Unknown function (DUF542) J4H94_RS17000 PF00092 von Willebrand factor type A domain J4H94_RS17005 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4H94_RS17010 PF00034 Cytochrome c J4H94_RS17015 PF17805 AsnC-like ligand binding domain J4H94_RS17020 PF13404 AsnC-type helix-turn-helix domain J4H94_RS17020 PF17805 AsnC-like ligand binding domain J4H94_RS17025 PF17805 AsnC-like ligand binding domain J4H94_RS17030 PF17805 AsnC-like ligand binding domain J4H94_RS17040 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4H94_RS17045 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4H94_RS17050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4H94_RS17055 PF08406 CbbQ/NirQ/NorQ C-terminal J4H94_RS17055 PF07728 AAA domain (dynein-related subfamily) J4H94_RS17060 PF00510 Cytochrome c oxidase subunit III J4H94_RS17065 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J4H94_RS17070 PF13186 Iron-sulfur cluster-binding domain J4H94_RS17070 PF04055 Radical SAM superfamily J4H94_RS17075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4H94_RS17075 PF14824 Sirohaem biosynthesis protein central J4H94_RS17075 PF10414 Sirohaem synthase dimerisation region J4H94_RS17085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS17085 PF03466 LysR substrate binding domain J4H94_RS17090 PF01769 Divalent cation transporter J4H94_RS17090 PF00571 CBS domain J4H94_RS17090 PF03448 MgtE intracellular N domain J4H94_RS17095 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4H94_RS17100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS17115 PF02416 mttA/Hcf106 family J4H94_RS17120 PF05573 NosL J4H94_RS17125 PF12679 ABC-2 family transporter protein J4H94_RS17130 PF00005 ABC transporter J4H94_RS17135 PF05048 Periplasmic copper-binding protein (NosD) J4H94_RS17140 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J4H94_RS17140 PF18793 Nitrous oxide reductase propeller repeat 2 J4H94_RS17140 PF18764 Nitrous oxide reductase propeller repeat J4H94_RS17145 PF12801 4Fe-4S binding domain J4H94_RS17145 PF04205 FMN-binding domain J4H94_RS17150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4H94_RS17150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4H94_RS17150 PF02770 Acyl-CoA dehydrogenase, middle domain J4H94_RS17165 PF04343 Protein of unknown function, DUF488 J4H94_RS17170 PF03480 Bacterial extracellular solute-binding protein, family 7 J4H94_RS17175 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4H94_RS17180 PF03313 Serine dehydratase alpha chain J4H94_RS17180 PF03315 Serine dehydratase beta chain J4H94_RS17185 PF18024 Helix-turn-helix domain J4H94_RS17185 PF00158 Sigma-54 interaction domain J4H94_RS17190 PF00351 Biopterin-dependent aromatic amino acid hydroxylase J4H94_RS17195 PF01329 Pterin 4 alpha carbinolamine dehydratase J4H94_RS17200 PF00155 Aminotransferase class I and II J4H94_RS17210 PF02560 Cyanate lyase C-terminal domain J4H94_RS17215 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin J4H94_RS17220 PF07969 Amidohydrolase family J4H94_RS17230 PF03061 Thioesterase superfamily J4H94_RS17235 PF08274 PhnA Zinc-Ribbon J4H94_RS17235 PF03831 PhnA domain J4H94_RS17240 PF00313 'Cold-shock' DNA-binding domain J4H94_RS17250 PF08448 PAS fold J4H94_RS17250 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS17260 PF00563 EAL domain J4H94_RS17260 PF03707 Bacterial signalling protein N terminal repeat J4H94_RS17260 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS17270 PF07995 Glucose / Sorbosone dehydrogenase J4H94_RS17290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4H94_RS17295 PF00571 CBS domain J4H94_RS17295 PF01595 Cyclin M transmembrane N-terminal domain J4H94_RS17305 PF02627 Carboxymuconolactone decarboxylase family J4H94_RS17330 PF01258 Prokaryotic dksA/traR C4-type zinc finger J4H94_RS17335 PF07683 Cobalamin synthesis protein cobW C-terminal domain J4H94_RS17335 PF02492 CobW/HypB/UreG, nucleotide-binding domain J4H94_RS17345 PF03860 Domain of Unknown Function (DUF326) J4H94_RS17350 PF01205 Uncharacterized protein family UPF0029 J4H94_RS17355 PF00962 Adenosine/AMP deaminase J4H94_RS17365 PF07690 Major Facilitator Superfamily J4H94_RS17370 PF08361 MAATS-type transcriptional repressor, C-terminal region J4H94_RS17370 PF00440 Bacterial regulatory proteins, tetR family J4H94_RS17380 PF00403 Heavy-metal-associated domain J4H94_RS17385 PF09278 MerR, DNA binding J4H94_RS17385 PF00376 MerR family regulatory protein J4H94_RS17390 PF00672 HAMP domain J4H94_RS17390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS17390 PF16591 Helical bimodular sensor domain J4H94_RS17395 PF00210 Ferritin-like domain J4H94_RS17400 PF13533 Biotin-lipoyl like J4H94_RS17405 PF00873 AcrB/AcrD/AcrF family J4H94_RS17410 PF08139 Prokaryotic membrane lipoprotein lipid attachment site J4H94_RS17410 PF02321 Outer membrane efflux protein J4H94_RS17420 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J4H94_RS17420 PF12833 Helix-turn-helix domain J4H94_RS17420 PF02805 Metal binding domain of Ada J4H94_RS17420 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J4H94_RS17430 PF01026 TatD related DNase J4H94_RS17435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS17435 PF00672 HAMP domain J4H94_RS17435 PF12729 Four helix bundle sensory module for signal transduction J4H94_RS17445 PF01510 N-acetylmuramoyl-L-alanine amidase J4H94_RS17450 PF04493 Endonuclease V J4H94_RS17455 PF12833 Helix-turn-helix domain J4H94_RS17460 PF03969 AFG1-like ATPase J4H94_RS17465 PF00579 tRNA synthetases class I (W and Y) J4H94_RS17470 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J4H94_RS17480 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J4H94_RS17480 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J4H94_RS17495 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4H94_RS17515 PF00004 ATPase family associated with various cellular activities (AAA) J4H94_RS17515 PF07724 AAA domain (Cdc48 subfamily) J4H94_RS17515 PF17871 AAA lid domain J4H94_RS17515 PF02861 Clp amino terminal domain, pathogenicity island component J4H94_RS17515 PF10431 C-terminal, D2-small domain, of ClpB protein J4H94_RS17520 PF02578 Multi-copper polyphenol oxidoreductase laccase J4H94_RS17525 PF00849 RNA pseudouridylate synthase J4H94_RS17525 PF01479 S4 domain J4H94_RS17530 PF13525 Outer membrane lipoprotein J4H94_RS17540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS17540 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS17545 PF00072 Response regulator receiver domain J4H94_RS17545 PF00158 Sigma-54 interaction domain J4H94_RS17545 PF02954 Bacterial regulatory protein, Fis family J4H94_RS17555 PF00072 Response regulator receiver domain J4H94_RS17555 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS17560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS17565 PF11842 Domain of unknown function (DUF3362) J4H94_RS17565 PF04055 Radical SAM superfamily J4H94_RS17565 PF08497 Radical SAM N-terminal J4H94_RS17575 PF00842 Alanine racemase, C-terminal domain J4H94_RS17575 PF01168 Alanine racemase, N-terminal domain J4H94_RS17580 PF03796 DnaB-like helicase C terminal domain J4H94_RS17580 PF00772 DnaB-like helicase N terminal domain J4H94_RS17585 PF03948 Ribosomal protein L9, C-terminal domain J4H94_RS17585 PF01281 Ribosomal protein L9, N-terminal domain J4H94_RS17595 PF01084 Ribosomal protein S18 J4H94_RS17600 PF01250 Ribosomal protein S6 J4H94_RS17605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS17605 PF13426 PAS domain J4H94_RS17605 PF00072 Response regulator receiver domain J4H94_RS17610 PF08032 RNA 2'-O ribose methyltransferase substrate binding J4H94_RS17610 PF00588 SpoU rRNA Methylase family J4H94_RS17615 PF00773 RNB domain J4H94_RS17615 PF08461 Ribonuclease R winged-helix domain J4H94_RS17615 PF17876 Cold shock domain J4H94_RS17615 PF08206 Ribonuclease B OB domain J4H94_RS17615 PF00575 S1 RNA binding domain J4H94_RS17630 PF00709 Adenylosuccinate synthetase J4H94_RS17635 PF13393 Histidyl-tRNA synthetase J4H94_RS17640 PF01145 SPFH domain / Band 7 family J4H94_RS17645 PF01145 SPFH domain / Band 7 family J4H94_RS17645 PF12221 Bacterial membrane protein N terminal J4H94_RS17650 PF16360 GTP-binding GTPase Middle Region J4H94_RS17650 PF01926 50S ribosome-binding GTPase J4H94_RS17650 PF13167 GTP-binding GTPase N-terminal J4H94_RS17655 PF17209 Hfq protein J4H94_RS17665 PF01119 DNA mismatch repair protein, C-terminal domain J4H94_RS17665 PF08676 MutL C terminal dimerisation domain J4H94_RS17670 PF11741 AMIN domain J4H94_RS17670 PF01520 N-acetylmuramoyl-L-alanine amidase J4H94_RS17675 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J4H94_RS17680 PF01256 Carbohydrate kinase J4H94_RS17680 PF03853 YjeF-related protein N-terminus J4H94_RS17685 PF08331 Domain of unknown function (DUF1730) J4H94_RS17690 PF01434 Peptidase family M41 J4H94_RS17690 PF17862 AAA+ lid domain J4H94_RS17690 PF00004 ATPase family associated with various cellular activities (AAA) J4H94_RS17690 PF06480 FtsH Extracellular J4H94_RS17700 PF02441 Flavoprotein J4H94_RS17705 PF01225 Mur ligase family, catalytic domain J4H94_RS17705 PF08245 Mur ligase middle domain J4H94_RS17705 PF02875 Mur ligase family, glutamate ligase domain J4H94_RS17710 PF00171 Aldehyde dehydrogenase family J4H94_RS17715 PF13520 Amino acid permease J4H94_RS17720 PF06751 Ethanolamine ammonia lyase large subunit (EutB) J4H94_RS17725 PF05985 Ethanolamine ammonia-lyase light chain (EutC) J4H94_RS17730 PF09423 PhoD-like phosphatase J4H94_RS17730 PF16655 PhoD-like phosphatase, N-terminal domain J4H94_RS17740 PF06167 Glucose-regulated metallo-peptidase M90 J4H94_RS17745 PF00719 Inorganic pyrophosphatase J4H94_RS17750 PF03741 Integral membrane protein TerC family J4H94_RS17750 PF03471 Transporter associated domain J4H94_RS17755 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS17765 PF00072 Response regulator receiver domain J4H94_RS17765 PF00196 Bacterial regulatory proteins, luxR family J4H94_RS17770 PF05231 MASE1 J4H94_RS17770 PF07730 Histidine kinase J4H94_RS17770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS17775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS17775 PF13426 PAS domain J4H94_RS17775 PF08447 PAS fold J4H94_RS17780 PF00072 Response regulator receiver domain J4H94_RS17790 PF02895 Signal transducing histidine kinase, homodimeric domain J4H94_RS17790 PF01584 CheW-like domain J4H94_RS17790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS17790 PF01627 Hpt domain J4H94_RS17795 PF00672 HAMP domain J4H94_RS17795 PF12729 Four helix bundle sensory module for signal transduction J4H94_RS17795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS17800 PF01584 CheW-like domain J4H94_RS17805 PF01739 CheR methyltransferase, SAM binding domain J4H94_RS17805 PF03705 CheR methyltransferase, all-alpha domain J4H94_RS17810 PF01339 CheB methylesterase J4H94_RS17810 PF00072 Response regulator receiver domain J4H94_RS17820 PF00563 EAL domain J4H94_RS17820 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS17820 PF13426 PAS domain J4H94_RS17830 PF00282 Pyridoxal-dependent decarboxylase conserved domain J4H94_RS17835 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) J4H94_RS17850 PF04183 IucA / IucC family J4H94_RS17850 PF06276 Ferric iron reductase FhuF-like transporter J4H94_RS17860 PF02609 Exonuclease VII small subunit J4H94_RS17865 PF00348 Polyprenyl synthetase J4H94_RS17870 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J4H94_RS17870 PF02779 Transketolase, pyrimidine binding domain J4H94_RS17870 PF02780 Transketolase, C-terminal domain J4H94_RS17900 PF04408 Helicase associated domain (HA2) J4H94_RS17900 PF00270 DEAD/DEAH box helicase J4H94_RS17900 PF08482 ATP-dependent helicase C-terminal J4H94_RS17900 PF00271 Helicase conserved C-terminal domain J4H94_RS17910 PF16916 Dimerisation domain of Zinc Transporter J4H94_RS17910 PF01545 Cation efflux family J4H94_RS17915 PF13404 AsnC-type helix-turn-helix domain J4H94_RS17915 PF01037 Lrp/AsnC ligand binding domain J4H94_RS17940 PF02653 Branched-chain amino acid transport system / permease component J4H94_RS17945 PF02653 Branched-chain amino acid transport system / permease component J4H94_RS17950 PF00005 ABC transporter J4H94_RS17950 PF12399 Branched-chain amino acid ATP-binding cassette transporter J4H94_RS17955 PF00005 ABC transporter J4H94_RS17960 PF00689 Cation transporting ATPase, C-terminus J4H94_RS17960 PF00690 Cation transporter/ATPase, N-terminus J4H94_RS17965 PF01774 UreD urease accessory protein J4H94_RS17970 PF00547 Urease, gamma subunit J4H94_RS17980 PF00699 Urease beta subunit J4H94_RS17985 PF01979 Amidohydrolase family J4H94_RS17985 PF00449 Urease alpha-subunit, N-terminal domain J4H94_RS17990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS17990 PF00360 Phytochrome region J4H94_RS17990 PF08446 PAS fold J4H94_RS17990 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS17990 PF01590 GAF domain J4H94_RS17995 PF01258 Prokaryotic dksA/traR C4-type zinc finger J4H94_RS18020 PF02814 UreE urease accessory protein, N-terminal domain J4H94_RS18020 PF05194 UreE urease accessory protein, C-terminal domain J4H94_RS18025 PF01730 UreF J4H94_RS18030 PF02492 CobW/HypB/UreG, nucleotide-binding domain J4H94_RS18035 PF04955 HupE / UreJ protein J4H94_RS18045 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus J4H94_RS18045 PF01048 Phosphorylase superfamily J4H94_RS18050 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain J4H94_RS18050 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain J4H94_RS18055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4H94_RS18055 PF02770 Acyl-CoA dehydrogenase, middle domain J4H94_RS18055 PF18158 Adaptive response protein AidB N-terminal domain J4H94_RS18060 PF00672 HAMP domain J4H94_RS18060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS18060 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS18060 PF01627 Hpt domain J4H94_RS18060 PF00072 Response regulator receiver domain J4H94_RS18060 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4H94_RS18065 PF08543 Phosphomethylpyrimidine kinase J4H94_RS18065 PF02581 Thiamine monophosphate synthase J4H94_RS18070 PF02581 Thiamine monophosphate synthase J4H94_RS18075 PF00202 Aminotransferase class-III J4H94_RS18090 PF04055 Radical SAM superfamily J4H94_RS18090 PF01938 TRAM domain J4H94_RS18090 PF00919 Uncharacterized protein family UPF0004 J4H94_RS18095 PF02562 PhoH-like protein J4H94_RS18100 PF02130 Uncharacterized protein family UPF0054 J4H94_RS18105 PF03471 Transporter associated domain J4H94_RS18105 PF00571 CBS domain J4H94_RS18110 PF00795 Carbon-nitrogen hydrolase J4H94_RS18125 PF08264 Anticodon-binding domain of tRNA J4H94_RS18125 PF00133 tRNA synthetases class I (I, L, M and V) J4H94_RS18125 PF13603 Leucyl-tRNA synthetase, Domain 2 J4H94_RS18125 PF09334 tRNA synthetases class I (M) J4H94_RS18140 PF03889 Alternative ribosome-rescue factor A J4H94_RS18145 PF13406 Transglycosylase SLT domain J4H94_RS18155 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J4H94_RS18155 PF04055 Radical SAM superfamily J4H94_RS18160 PF03099 Biotin/lipoate A/B protein ligase family J4H94_RS18165 PF04359 Protein of unknown function (DUF493) J4H94_RS18170 PF07943 Penicillin-binding protein 5, C-terminal domain J4H94_RS18170 PF00768 D-alanyl-D-alanine carboxypeptidase J4H94_RS18175 PF03330 Lytic transglycolase J4H94_RS18175 PF05036 Sporulation related domain J4H94_RS18180 PF13406 Transglycosylase SLT domain J4H94_RS18185 PF01098 Cell cycle protein J4H94_RS18190 PF03717 Penicillin-binding Protein dimerisation domain J4H94_RS18190 PF00905 Penicillin binding protein transpeptidase domain J4H94_RS18195 PF02590 Predicted SPOUT methyltransferase J4H94_RS18205 PF01467 Cytidylyltransferase-like J4H94_RS18210 PF00171 Aldehyde dehydrogenase family J4H94_RS18215 PF09335 SNARE associated Golgi protein J4H94_RS18230 PF04172 LrgB-like family J4H94_RS18235 PF03788 LrgA family J4H94_RS18240 PF01575 MaoC like domain J4H94_RS18250 PF13460 NAD(P)H-binding J4H94_RS18255 PF00929 Exonuclease J4H94_RS18265 PF03193 RsgA GTPase J4H94_RS18270 PF13677 Membrane MotB of proton-channel complex MotA/MotB J4H94_RS18270 PF00691 OmpA family J4H94_RS18275 PF01618 MotA/TolQ/ExbB proton channel family J4H94_RS18285 PF00581 Rhodanese-like domain J4H94_RS18290 PF02666 Phosphatidylserine decarboxylase J4H94_RS18305 PF08240 Alcohol dehydrogenase GroES-like domain J4H94_RS18305 PF00107 Zinc-binding dehydrogenase J4H94_RS18325 PF00521 DNA gyrase/topoisomerase IV, subunit A J4H94_RS18325 PF03989 DNA gyrase C-terminal domain, beta-propeller J4H94_RS18340 PF01751 Toprim domain J4H94_RS18340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS18340 PF00986 DNA gyrase B subunit, carboxyl terminus J4H94_RS18340 PF00204 DNA gyrase B J4H94_RS18345 PF05728 Uncharacterised protein family (UPF0227) J4H94_RS18350 PF00149 Calcineurin-like phosphoesterase J4H94_RS18360 PF00293 NUDIX domain J4H94_RS18370 PF13667 ThiC-associated domain J4H94_RS18370 PF01964 Radical SAM ThiC family J4H94_RS18375 PF02321 Outer membrane efflux protein J4H94_RS18380 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J4H94_RS18385 PF00893 Small Multidrug Resistance protein J4H94_RS18390 PF01266 FAD dependent oxidoreductase J4H94_RS18395 PF00248 Aldo/keto reductase family J4H94_RS18405 PF01467 Cytidylyltransferase-like J4H94_RS18405 PF00294 pfkB family carbohydrate kinase J4H94_RS18420 PF00005 ABC transporter J4H94_RS18420 PF00664 ABC transporter transmembrane region J4H94_RS18450 PF00534 Glycosyl transferases group 1 J4H94_RS18450 PF13439 Glycosyltransferase Family 4 J4H94_RS18455 PF02543 Carbamoyltransferase N-terminus J4H94_RS18455 PF16861 Carbamoyltransferase C-terminus J4H94_RS18480 PF13439 Glycosyltransferase Family 4 J4H94_RS18480 PF00534 Glycosyl transferases group 1 J4H94_RS18485 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J4H94_RS18490 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J4H94_RS18495 PF01063 Amino-transferase class IV J4H94_RS18500 PF08335 GlnD PII-uridylyltransferase J4H94_RS18500 PF03710 Glutamate-ammonia ligase adenylyltransferase J4H94_RS18505 PF17831 Pyruvate dehydrogenase E1 component middle domain J4H94_RS18505 PF00456 Transketolase, thiamine diphosphate binding domain J4H94_RS18510 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4H94_RS18510 PF00364 Biotin-requiring enzyme J4H94_RS18510 PF02817 e3 binding domain J4H94_RS18520 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS18520 PF03707 Bacterial signalling protein N terminal repeat J4H94_RS18520 PF00563 EAL domain J4H94_RS18525 PF01625 Peptide methionine sulfoxide reductase J4H94_RS18530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4H94_RS18530 PF12806 Acetyl-CoA dehydrogenase C-terminal like J4H94_RS18530 PF02770 Acyl-CoA dehydrogenase, middle domain J4H94_RS18530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4H94_RS18535 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS18540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4H94_RS18540 PF02770 Acyl-CoA dehydrogenase, middle domain J4H94_RS18540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4H94_RS18540 PF12806 Acetyl-CoA dehydrogenase C-terminal like J4H94_RS18555 PF08241 Methyltransferase domain J4H94_RS18560 PF12697 Alpha/beta hydrolase family J4H94_RS18560 PF08241 Methyltransferase domain J4H94_RS18565 PF00155 Aminotransferase class I and II J4H94_RS18570 PF06968 Biotin and Thiamin Synthesis associated domain J4H94_RS18570 PF04055 Radical SAM superfamily J4H94_RS18575 PF00156 Phosphoribosyl transferase domain J4H94_RS18580 PF01636 Phosphotransferase enzyme family J4H94_RS18585 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J4H94_RS18590 PF03060 Nitronate monooxygenase J4H94_RS18595 PF04116 Fatty acid hydroxylase superfamily J4H94_RS18615 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase J4H94_RS18620 PF01070 FMN-dependent dehydrogenase J4H94_RS18625 PF00348 Polyprenyl synthetase J4H94_RS18630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4H94_RS18630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4H94_RS18630 PF02770 Acyl-CoA dehydrogenase, middle domain J4H94_RS18630 PF12806 Acetyl-CoA dehydrogenase C-terminal like J4H94_RS18635 PF02080 TrkA-C domain J4H94_RS18635 PF00999 Sodium/hydrogen exchanger family J4H94_RS18635 PF03471 Transporter associated domain J4H94_RS18640 PF12795 Mechanosensitive ion channel porin domain J4H94_RS18640 PF00924 Mechanosensitive ion channel J4H94_RS18640 PF12794 Mechanosensitive ion channel inner membrane domain 1 J4H94_RS18645 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J4H94_RS18650 PF00072 Response regulator receiver domain J4H94_RS18650 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS18655 PF01339 CheB methylesterase J4H94_RS18660 PF01739 CheR methyltransferase, SAM binding domain J4H94_RS18660 PF03705 CheR methyltransferase, all-alpha domain J4H94_RS18665 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4H94_RS18665 PF00072 Response regulator receiver domain J4H94_RS18665 PF01627 Hpt domain J4H94_RS18665 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS18665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS18665 PF00672 HAMP domain J4H94_RS18670 PF01679 Proteolipid membrane potential modulator J4H94_RS18675 PF00106 short chain dehydrogenase J4H94_RS18685 PF00753 Metallo-beta-lactamase superfamily J4H94_RS18695 PF16200 C-terminal region of band_7 J4H94_RS18695 PF01145 SPFH domain / Band 7 family J4H94_RS18705 PF03573 outer membrane porin, OprD family J4H94_RS18725 PF00593 TonB dependent receptor J4H94_RS18725 PF07715 TonB-dependent Receptor Plug Domain J4H94_RS18730 PF01263 Aldose 1-epimerase J4H94_RS18735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4H94_RS18735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4H94_RS18740 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus J4H94_RS18740 PF08666 SAF domain J4H94_RS18745 PF13378 Enolase C-terminal domain-like J4H94_RS18745 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J4H94_RS18750 PF00171 Aldehyde dehydrogenase family J4H94_RS18755 PF00701 Dihydrodipicolinate synthetase family J4H94_RS18760 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J4H94_RS18760 PF13378 Enolase C-terminal domain-like J4H94_RS18775 PF01970 Tripartite tricarboxylate transporter TctA family J4H94_RS18780 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J4H94_RS18780 PF13378 Enolase C-terminal domain-like J4H94_RS18785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS18785 PF03466 LysR substrate binding domain J4H94_RS18800 PF01370 NAD dependent epimerase/dehydratase family J4H94_RS18805 PF08450 SMP-30/Gluconolactonase/LRE-like region J4H94_RS18810 PF03480 Bacterial extracellular solute-binding protein, family 7 J4H94_RS18820 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4H94_RS18830 PF00392 Bacterial regulatory proteins, gntR family J4H94_RS18830 PF07729 FCD domain J4H94_RS18835 PF01204 Trehalase J4H94_RS18845 PF00892 EamA-like transporter family J4H94_RS18855 PF01274 Malate synthase J4H94_RS18860 PF00672 HAMP domain J4H94_RS18860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS18860 PF02743 Cache domain J4H94_RS18880 PF11490 DNA polymerase III polC-type N-terminus II J4H94_RS18880 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4H94_RS18880 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4H94_RS18880 PF14579 Helix-hairpin-helix motif J4H94_RS18880 PF00929 Exonuclease J4H94_RS18880 PF02811 PHP domain J4H94_RS18890 PF00474 Sodium:solute symporter family J4H94_RS18905 PF03880 DbpA RNA binding domain J4H94_RS18905 PF00270 DEAD/DEAH box helicase J4H94_RS18905 PF00271 Helicase conserved C-terminal domain J4H94_RS18910 PF12805 FUSC-like inner membrane protein yccS J4H94_RS18935 PF00563 EAL domain J4H94_RS18935 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS18935 PF03707 Bacterial signalling protein N terminal repeat J4H94_RS18955 PF03861 ANTAR domain J4H94_RS18955 PF00072 Response regulator receiver domain J4H94_RS18960 PF01116 Fructose-bisphosphate aldolase class-II J4H94_RS18975 PF00162 Phosphoglycerate kinase J4H94_RS18980 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4H94_RS18980 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4H94_RS18985 PF00456 Transketolase, thiamine diphosphate binding domain J4H94_RS18985 PF02780 Transketolase, C-terminal domain J4H94_RS18985 PF02779 Transketolase, pyrimidine binding domain J4H94_RS18990 PF03466 LysR substrate binding domain J4H94_RS18990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS18995 PF02668 Taurine catabolism dioxygenase TauD, TfdA family J4H94_RS19005 PF13649 Methyltransferase domain J4H94_RS19010 PF00438 S-adenosylmethionine synthetase, N-terminal domain J4H94_RS19010 PF02772 S-adenosylmethionine synthetase, central domain J4H94_RS19010 PF02773 S-adenosylmethionine synthetase, C-terminal domain J4H94_RS19030 PF01061 ABC-2 type transporter J4H94_RS19035 PF00005 ABC transporter J4H94_RS19040 PF00970 Oxidoreductase FAD-binding domain J4H94_RS19040 PF00111 2Fe-2S iron-sulfur cluster binding domain J4H94_RS19040 PF00175 Oxidoreductase NAD-binding domain J4H94_RS19045 PF03120 NAD-dependent DNA ligase OB-fold domain J4H94_RS19045 PF01653 NAD-dependent DNA ligase adenylation domain J4H94_RS19065 PF00999 Sodium/hydrogen exchanger family J4H94_RS19070 PF05221 S-adenosyl-L-homocysteine hydrolase J4H94_RS19070 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J4H94_RS19075 PF02219 Methylenetetrahydrofolate reductase J4H94_RS19080 PF00271 Helicase conserved C-terminal domain J4H94_RS19080 PF00270 DEAD/DEAH box helicase J4H94_RS19085 PF08139 Prokaryotic membrane lipoprotein lipid attachment site J4H94_RS19085 PF02321 Outer membrane efflux protein J4H94_RS19090 PF00873 AcrB/AcrD/AcrF family J4H94_RS19095 PF00529 HlyD membrane-fusion protein of T1SS J4H94_RS19095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4H94_RS19100 PF04264 YceI-like domain J4H94_RS19105 PF01292 Prokaryotic cytochrome b561 J4H94_RS19110 PF00202 Aminotransferase class-III J4H94_RS19115 PF04452 RNA methyltransferase J4H94_RS19125 PF01339 CheB methylesterase J4H94_RS19130 PF00072 Response regulator receiver domain J4H94_RS19130 PF02895 Signal transducing histidine kinase, homodimeric domain J4H94_RS19130 PF01627 Hpt domain J4H94_RS19130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS19130 PF01584 CheW-like domain J4H94_RS19135 PF03705 CheR methyltransferase, all-alpha domain J4H94_RS19135 PF01739 CheR methyltransferase, SAM binding domain J4H94_RS19140 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J4H94_RS19140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS19145 PF01584 CheW-like domain J4H94_RS19150 PF00072 Response regulator receiver domain J4H94_RS19155 PF00072 Response regulator receiver domain J4H94_RS19160 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J4H94_RS19160 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J4H94_RS19170 PF02622 Uncharacterized ACR, COG1678 J4H94_RS19175 PF03652 Holliday junction resolvase J4H94_RS19180 PF00156 Phosphoribosyl transferase domain J4H94_RS19185 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4H94_RS19185 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4H94_RS19190 PF01979 Amidohydrolase family J4H94_RS19210 PF00437 Type II/IV secretion system protein J4H94_RS19215 PF00437 Type II/IV secretion system protein J4H94_RS19220 PF01168 Alanine racemase, N-terminal domain J4H94_RS19225 PF14748 Pyrroline-5-carboxylate reductase dimerisation J4H94_RS19225 PF03807 NADP oxidoreductase coenzyme F420-dependent J4H94_RS19230 PF02325 YGGT family J4H94_RS19235 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J4H94_RS19235 PF01926 50S ribosome-binding GTPase J4H94_RS19240 PF00561 alpha/beta hydrolase fold J4H94_RS19245 PF00561 alpha/beta hydrolase fold J4H94_RS19245 PF07021 Methionine biosynthesis protein MetW J4H94_RS19255 PF01725 Ham1 family J4H94_RS19260 PF04055 Radical SAM superfamily J4H94_RS19260 PF06969 HemN C-terminal domain J4H94_RS19275 PF13520 Amino acid permease J4H94_RS19285 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4H94_RS19285 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4H94_RS19290 PF00696 Amino acid kinase family J4H94_RS19295 PF07044 Protein of unknown function (DUF1329) J4H94_RS19300 PF02390 Putative methyltransferase J4H94_RS19305 PF05690 Thiazole biosynthesis protein ThiG J4H94_RS19310 PF05690 Thiazole biosynthesis protein ThiG J4H94_RS19310 PF02597 ThiS family J4H94_RS19315 PF04241 Protein of unknown function (DUF423) J4H94_RS19320 PF00912 Transglycosylase J4H94_RS19325 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS19325 PF03707 Bacterial signalling protein N terminal repeat J4H94_RS19325 PF00563 EAL domain J4H94_RS19330 PF00072 Response regulator receiver domain J4H94_RS19330 PF01627 Hpt domain J4H94_RS19330 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS19330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS19330 PF00672 HAMP domain J4H94_RS19330 PF17149 Periplasmic sensor domain found in signal transduction proteins J4H94_RS19335 PF00140 Sigma-70 factor, region 1.2 J4H94_RS19335 PF04542 Sigma-70 region 2 J4H94_RS19335 PF04545 Sigma-70, region 4 J4H94_RS19340 PF18075 FtsX extracellular domain J4H94_RS19345 PF00005 ABC transporter J4H94_RS19350 PF02881 SRP54-type protein, helical bundle domain J4H94_RS19350 PF00448 SRP54-type protein, GTPase domain J4H94_RS19355 PF05193 Peptidase M16 inactive domain J4H94_RS19355 PF00675 Insulinase (Peptidase family M16) J4H94_RS19360 PF05193 Peptidase M16 inactive domain J4H94_RS19380 PF00440 Bacterial regulatory proteins, tetR family J4H94_RS19385 PF00171 Aldehyde dehydrogenase family J4H94_RS19395 PF00732 GMC oxidoreductase J4H94_RS19395 PF05199 GMC oxidoreductase J4H94_RS19400 PF01467 Cytidylyltransferase-like J4H94_RS19405 PF00037 4Fe-4S binding domain J4H94_RS19425 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J4H94_RS19425 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J4H94_RS19425 PF06827 Zinc finger found in FPG and IleRS J4H94_RS19435 PF01965 DJ-1/PfpI family J4H94_RS19440 PF10672 S-adenosylmethionine-dependent methyltransferase J4H94_RS19440 PF17785 PUA-like domain J4H94_RS19450 PF00920 Dehydratase family J4H94_RS19470 PF00186 Dihydrofolate reductase J4H94_RS19475 PF03009 Glycerophosphoryl diester phosphodiesterase family J4H94_RS19485 PF01926 50S ribosome-binding GTPase J4H94_RS19485 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J4H94_RS19495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS19495 PF03466 LysR substrate binding domain J4H94_RS19500 PF01895 PhoU domain J4H94_RS19505 PF00005 ABC transporter J4H94_RS19510 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS19515 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS19520 PF12849 PBP superfamily domain J4H94_RS19525 PF03061 Thioesterase superfamily J4H94_RS19530 PF00360 Phytochrome region J4H94_RS19530 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS19530 PF01590 GAF domain J4H94_RS19530 PF00563 EAL domain J4H94_RS19545 PF13538 UvrD-like helicase C-terminal domain J4H94_RS19550 PF12705 PD-(D/E)XK nuclease superfamily J4H94_RS19550 PF13361 UvrD-like helicase C-terminal domain J4H94_RS19550 PF00580 UvrD/REP helicase N-terminal domain J4H94_RS19555 PF17946 RecC C-terminal domain J4H94_RS19565 PF02690 Na+/Pi-cotransporter J4H94_RS19580 PF16868 NMT1-like family J4H94_RS19585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS19585 PF00672 HAMP domain J4H94_RS19595 PF08447 PAS fold J4H94_RS19595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS19600 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS19600 PF01590 GAF domain J4H94_RS19600 PF00563 EAL domain J4H94_RS19600 PF00360 Phytochrome region J4H94_RS19605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS19605 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS19610 PF00072 Response regulator receiver domain J4H94_RS19610 PF00486 Transcriptional regulatory protein, C terminal J4H94_RS19615 PF03573 outer membrane porin, OprD family J4H94_RS19630 PF01970 Tripartite tricarboxylate transporter TctA family J4H94_RS19635 PF05145 Transition state regulatory protein AbrB J4H94_RS19640 PF07670 Nucleoside recognition J4H94_RS19660 PF02954 Bacterial regulatory protein, Fis family J4H94_RS19660 PF00158 Sigma-54 interaction domain J4H94_RS19660 PF00072 Response regulator receiver domain J4H94_RS19665 PF08448 PAS fold J4H94_RS19665 PF00672 HAMP domain J4H94_RS19665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS19665 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS19665 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB J4H94_RS19675 PF01510 N-acetylmuramoyl-L-alanine amidase J4H94_RS19680 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS19690 PF01323 DSBA-like thioredoxin domain J4H94_RS19695 PF00034 Cytochrome c J4H94_RS19700 PF01926 50S ribosome-binding GTPase J4H94_RS19705 PF02347 Glycine cleavage system P-protein J4H94_RS19710 PF01597 Glycine cleavage H-protein J4H94_RS19715 PF08669 Glycine cleavage T-protein C-terminal barrel domain J4H94_RS19715 PF01571 Aminomethyltransferase folate-binding domain J4H94_RS19720 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS19730 PF01494 FAD binding domain J4H94_RS19740 PF01494 FAD binding domain J4H94_RS19745 PF05195 Aminopeptidase P, N-terminal domain J4H94_RS19745 PF00557 Metallopeptidase family M24 J4H94_RS19750 PF03695 Uncharacterised protein family (UPF0149) J4H94_RS19760 PF05164 Cell division protein ZapA J4H94_RS19770 PF01812 5-formyltetrahydrofolate cyclo-ligase family J4H94_RS19790 PF08240 Alcohol dehydrogenase GroES-like domain J4H94_RS19790 PF00107 Zinc-binding dehydrogenase J4H94_RS19795 PF02556 Preprotein translocase subunit SecB J4H94_RS19800 PF00462 Glutaredoxin J4H94_RS19805 PF00581 Rhodanese-like domain J4H94_RS19810 PF06415 BPG-independent PGAM N-terminus (iPGM_N) J4H94_RS19810 PF01676 Metalloenzyme superfamily J4H94_RS19815 PF01551 Peptidase family M23 J4H94_RS19820 PF13180 PDZ domain J4H94_RS19820 PF03572 Peptidase family S41 J4H94_RS19825 PF04748 Divergent polysaccharide deacetylase J4H94_RS19840 PF00977 Histidine biosynthesis protein J4H94_RS19845 PF00977 Histidine biosynthesis protein J4H94_RS19855 PF00117 Glutamine amidotransferase class-I J4H94_RS19860 PF00475 Imidazoleglycerol-phosphate dehydratase J4H94_RS19865 PF03861 ANTAR domain J4H94_RS19865 PF08376 Nitrate and nitrite sensing J4H94_RS19875 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS19880 PF00005 ABC transporter J4H94_RS19895 PF10576 Iron-sulfur binding domain of endonuclease III J4H94_RS19895 PF00633 Helix-hairpin-helix motif J4H94_RS19895 PF00730 HhH-GPD superfamily base excision DNA repair protein J4H94_RS19895 PF14815 NUDIX domain J4H94_RS19900 PF04362 Bacterial Fe(2+) trafficking J4H94_RS19910 PF13356 Arm DNA-binding domain J4H94_RS19910 PF00589 Phage integrase family J4H94_RS19945 PF13362 Toprim domain J4H94_RS19945 PF18818 Metallopeptidase superfamily domain J4H94_RS19945 PF08401 Domain of unknown function (DUF1738) J4H94_RS19950 PF13148 Protein of unknown function (DUF3987) J4H94_RS19975 PF00565 Staphylococcal nuclease homologue J4H94_RS19985 PF02028 BCCT, betaine/carnitine/choline family transporter J4H94_RS19990 PF00005 ABC transporter J4H94_RS19995 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4H94_RS20000 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS20005 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS20010 PF01263 Aldose 1-epimerase J4H94_RS20025 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath J4H94_RS20050 PF05947 Type VI secretion system, TssF J4H94_RS20060 PF00004 ATPase family associated with various cellular activities (AAA) J4H94_RS20060 PF07724 AAA domain (Cdc48 subfamily) J4H94_RS20060 PF17871 AAA lid domain J4H94_RS20060 PF10431 C-terminal, D2-small domain, of ClpB protein J4H94_RS20065 PF02954 Bacterial regulatory protein, Fis family J4H94_RS20065 PF00072 Response regulator receiver domain J4H94_RS20065 PF00158 Sigma-54 interaction domain J4H94_RS20070 PF04717 Type VI secretion system, phage-baseplate injector J4H94_RS20080 PF01764 Lipase (class 3) J4H94_RS20100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS20100 PF03466 LysR substrate binding domain J4H94_RS20105 PF01266 FAD dependent oxidoreductase J4H94_RS20120 PF00698 Acyl transferase domain J4H94_RS20125 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG J4H94_RS20135 PF01039 Carboxyl transferase domain J4H94_RS20140 PF06857 Malonate decarboxylase delta subunit (MdcD) J4H94_RS20145 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase J4H94_RS20150 PF16957 Malonate decarboxylase, alpha subunit, transporter J4H94_RS20155 PF00106 short chain dehydrogenase J4H94_RS20160 PF00005 ABC transporter J4H94_RS20170 PF00528 Binding-protein-dependent transport system inner membrane component J4H94_RS20175 PF00392 Bacterial regulatory proteins, gntR family J4H94_RS20175 PF07702 UTRA domain J4H94_RS20180 PF06754 Phosphonate metabolism protein PhnG J4H94_RS20190 PF05861 Bacterial phosphonate metabolism protein (PhnI) J4H94_RS20195 PF06007 Phosphonate metabolism protein PhnJ J4H94_RS20200 PF00005 ABC transporter J4H94_RS20205 PF00005 ABC transporter J4H94_RS20210 PF07969 Amidohydrolase family J4H94_RS20220 PF12706 Beta-lactamase superfamily domain J4H94_RS20235 PF16868 NMT1-like family J4H94_RS20275 PF00296 Luciferase-like monooxygenase J4H94_RS20280 PF00999 Sodium/hydrogen exchanger family J4H94_RS20285 PF07311 Dodecin J4H94_RS20295 PF03797 Autotransporter beta-domain J4H94_RS20295 PF12334 Rickettsia outer membrane protein B J4H94_RS20300 PF13619 KTSC domain J4H94_RS20305 PF00664 ABC transporter transmembrane region J4H94_RS20305 PF00005 ABC transporter J4H94_RS20315 PF03275 UDP-galactopyranose mutase J4H94_RS20325 PF16363 GDP-mannose 4,6 dehydratase J4H94_RS20330 PF00857 Isochorismatase family J4H94_RS20340 PF03466 LysR substrate binding domain J4H94_RS20340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS20345 PF00291 Pyridoxal-phosphate dependent enzyme J4H94_RS20350 PF00290 Tryptophan synthase alpha chain J4H94_RS20355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS20355 PF03466 LysR substrate binding domain J4H94_RS20370 PF02798 Glutathione S-transferase, N-terminal domain J4H94_RS20400 PF03575 Peptidase family S51 J4H94_RS20405 PF00664 ABC transporter transmembrane region J4H94_RS20405 PF00005 ABC transporter J4H94_RS20440 PF04239 Protein of unknown function (DUF421) J4H94_RS20445 PF03466 LysR substrate binding domain J4H94_RS20445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS20460 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4H94_RS20460 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4H94_RS20460 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4H94_RS20460 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4H94_RS20470 PF08240 Alcohol dehydrogenase GroES-like domain J4H94_RS20485 PF00132 Bacterial transferase hexapeptide (six repeats) J4H94_RS20490 PF01432 Peptidase family M3 J4H94_RS20500 PF01757 Acyltransferase family J4H94_RS20505 PF04055 Radical SAM superfamily J4H94_RS20515 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J4H94_RS20515 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J4H94_RS20520 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4H94_RS20525 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 J4H94_RS20530 PF00510 Cytochrome c oxidase subunit III J4H94_RS20555 PF01040 UbiA prenyltransferase family J4H94_RS20560 PF02630 SCO1/SenC J4H94_RS20570 PF07715 TonB-dependent Receptor Plug Domain J4H94_RS20570 PF00593 TonB dependent receptor J4H94_RS20580 PF04542 Sigma-70 region 2 J4H94_RS20580 PF08281 Sigma-70, region 4 J4H94_RS20585 PF12276 Protein of unknown function (DUF3617) J4H94_RS20595 PF02492 CobW/HypB/UreG, nucleotide-binding domain J4H94_RS20595 PF07683 Cobalamin synthesis protein cobW C-terminal domain J4H94_RS20610 PF00360 Phytochrome region J4H94_RS20610 PF08446 PAS fold J4H94_RS20610 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS20610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS20610 PF01590 GAF domain J4H94_RS20615 PF00072 Response regulator receiver domain J4H94_RS20620 PF00072 Response regulator receiver domain J4H94_RS20620 PF13188 PAS domain J4H94_RS20620 PF00512 His Kinase A (phospho-acceptor) domain J4H94_RS20620 PF08448 PAS fold J4H94_RS20620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4H94_RS20625 PF01126 Heme oxygenase J4H94_RS20630 PF00672 HAMP domain J4H94_RS20630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4H94_RS20635 PF01380 SIS domain J4H94_RS20640 PF00455 DeoR C terminal sensor domain J4H94_RS20640 PF08220 DeoR-like helix-turn-helix domain J4H94_RS20645 PF12804 MobA-like NTP transferase domain J4H94_RS20645 PF14602 Hexapeptide repeat of succinyl-transferase J4H94_RS20645 PF00132 Bacterial transferase hexapeptide (six repeats) J4H94_RS20650 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J4H94_RS20650 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J4H94_RS20655 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4H94_RS20655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4H94_RS20660 PF00231 ATP synthase J4H94_RS20665 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4H94_RS20665 PF00306 ATP synthase alpha/beta chain, C terminal domain J4H94_RS20665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4H94_RS20670 PF00213 ATP synthase delta (OSCP) subunit J4H94_RS20675 PF00430 ATP synthase B/B' CF(0) J4H94_RS20680 PF00137 ATP synthase subunit C J4H94_RS20685 PF00119 ATP synthase A chain J4H94_RS20690 PF03899 ATP synthase I chain J4H94_RS20695 PF17762 HTH domain found in ParB protein J4H94_RS20695 PF02195 ParB-like nuclease domain J4H94_RS20700 PF13614 AAA domain J4H94_RS20705 PF02527 rRNA small subunit methyltransferase G J4H94_RS20710 PF01134 Glucose inhibited division protein A J4H94_RS20710 PF13932 GidA associated domain J4H94_RS20715 PF01926 50S ribosome-binding GTPase J4H94_RS20715 PF12631 MnmE helical domain J4H94_RS20715 PF10396 GTP-binding protein TrmE N-terminus J4H94_RS20720 PF02096 60Kd inner membrane protein J4H94_RS20720 PF14849 YidC periplasmic domain J4H94_RS20725 PF01809 Putative membrane protein insertion efficiency factor J4H94_RS20730 PF00825 Ribonuclease P J4H94_RS20735 PF00468 Ribosomal protein L34 J4H94_RS20775 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4H94_RS20790 PF18821 Large polyvalent protein-associated domain 7 J4H94_RS20790 PF03432 Relaxase/Mobilisation nuclease domain J4H94_RS20805 PF00263 Bacterial type II and III secretion system protein J4H94_RS20805 PF07655 Secretin N-terminal domain J4H94_RS20820 PF00437 Type II/IV secretion system protein J4H94_RS20835 PF00437 Type II/IV secretion system protein J4H94_RS20840 PF04917 Bacterial shufflon protein, N-terminal constant region J4H94_RS20845 PF00589 Phage integrase family J4H94_RS20850 PF01381 Helix-turn-helix J4H94_RS20875 PF01807 CHC2 zinc finger J4H94_RS20875 PF08278 DNA primase DnaG DnaB-binding J4H94_RS20875 PF10410 DnaB-helicase binding domain of primase J4H94_RS20875 PF08275 DNA primase catalytic core, N-terminal domain J4H94_RS20890 PF01131 DNA topoisomerase J4H94_RS20890 PF01751 Toprim domain J4H94_RS20965 PF00437 Type II/IV secretion system protein J4H94_RS21010 PF07927 HicA toxin of bacterial toxin-antitoxin, J4H94_RS21120 PF10134 Replication initiator protein A J4H94_RS21130 PF07015 VirC1 protein J4H94_RS21170 PF03707 Bacterial signalling protein N terminal repeat J4H94_RS21170 PF00563 EAL domain J4H94_RS21170 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS21175 PF05052 MerE protein J4H94_RS21180 PF13411 MerR HTH family regulatory protein J4H94_RS21185 PF00403 Heavy-metal-associated domain J4H94_RS21185 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4H94_RS21185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4H94_RS21190 PF00403 Heavy-metal-associated domain J4H94_RS21195 PF02411 MerT mercuric transport protein J4H94_RS21200 PF09278 MerR, DNA binding J4H94_RS21200 PF00376 MerR family regulatory protein J4H94_RS21215 PF00817 impB/mucB/samB family J4H94_RS21215 PF11799 impB/mucB/samB family C-terminal domain J4H94_RS21215 PF13438 Domain of unknown function (DUF4113) J4H94_RS21215 PF11798 IMS family HHH motif J4H94_RS21220 PF03743 Bacterial conjugation TrbI-like protein J4H94_RS21225 PF00437 Type II/IV secretion system protein J4H94_RS21235 PF09411 Lipid A 3-O-deacylase (PagL) J4H94_RS21245 PF07690 Major Facilitator Superfamily J4H94_RS21250 PF00970 Oxidoreductase FAD-binding domain J4H94_RS21250 PF00111 2Fe-2S iron-sulfur cluster binding domain J4H94_RS21250 PF00175 Oxidoreductase NAD-binding domain J4H94_RS21255 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J4H94_RS21260 PF00866 Ring hydroxylating beta subunit J4H94_RS21265 PF00355 Rieske [2Fe-2S] domain J4H94_RS21265 PF00848 Ring hydroxylating alpha subunit (catalytic domain) J4H94_RS21270 PF01614 Bacterial transcriptional regulator J4H94_RS21270 PF09339 IclR helix-turn-helix domain J4H94_RS21280 PF02311 AraC-like ligand binding domain J4H94_RS21280 PF12833 Helix-turn-helix domain J4H94_RS21285 PF00665 Integrase core domain J4H94_RS21285 PF13936 Helix-turn-helix domain J4H94_RS21290 PF02627 Carboxymuconolactone decarboxylase family J4H94_RS21295 PF12146 Serine aminopeptidase, S33 J4H94_RS21300 PF10397 Adenylosuccinate lyase C-terminus J4H94_RS21300 PF00206 Lyase J4H94_RS21305 PF02803 Thiolase, C-terminal domain J4H94_RS21305 PF00108 Thiolase, N-terminal domain J4H94_RS21310 PF01144 Coenzyme A transferase J4H94_RS21315 PF01144 Coenzyme A transferase J4H94_RS21320 PF01614 Bacterial transcriptional regulator J4H94_RS21320 PF09339 IclR helix-turn-helix domain J4H94_RS21325 PF03969 AFG1-like ATPase J4H94_RS21330 PF00775 Dioxygenase J4H94_RS21335 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal J4H94_RS21335 PF00775 Dioxygenase J4H94_RS21340 PF03466 LysR substrate binding domain J4H94_RS21340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4H94_RS21350 PF13936 Helix-turn-helix domain J4H94_RS21350 PF00665 Integrase core domain J4H94_RS21365 PF00589 Phage integrase family J4H94_RS21400 PF02195 ParB-like nuclease domain J4H94_RS21400 PF17762 HTH domain found in ParB protein J4H94_RS21405 PF13614 AAA domain J4H94_RS21430 PF01420 Type I restriction modification DNA specificity domain J4H94_RS21470 PF07196 Flagellin hook IN motif J4H94_RS21470 PF00669 Bacterial flagellin N-terminal helical region J4H94_RS21470 PF00700 Bacterial flagellin C-terminal helical region J4H94_RS21475 PF03692 Putative zinc- or iron-chelating domain J4H94_RS21480 PF00675 Insulinase (Peptidase family M16) J4H94_RS21480 PF05193 Peptidase M16 inactive domain J4H94_RS21485 PF00675 Insulinase (Peptidase family M16) J4H94_RS21485 PF05193 Peptidase M16 inactive domain J4H94_RS21495 PF00563 EAL domain J4H94_RS21495 PF08495 FIST N domain J4H94_RS21495 PF10442 FIST C domain J4H94_RS21495 PF00990 Diguanylate cyclase, GGDEF domain J4H94_RS21520 PF00691 OmpA family J4H94_RS21520 PF05736 OprF membrane domain