locus-tag class description UIB01_RS00005 PF00308 Bacterial dnaA protein UIB01_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix UIB01_RS00005 PF11638 DnaA N-terminal domain UIB01_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain UIB01_RS00010 PF02767 DNA polymerase III beta subunit, central domain UIB01_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain UIB01_RS00015 PF02463 RecF/RecN/SMC N terminal domain UIB01_RS00020 PF00204 DNA gyrase B UIB01_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus UIB01_RS00020 PF18053 DNA gyrase B subunit insert domain UIB01_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS00020 PF01751 Toprim domain UIB01_RS00025 PF07992 Pyridine nucleotide-disulphide oxidoreductase UIB01_RS00025 PF13192 Thioredoxin domain UIB01_RS00030 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS00045 PF05746 DALR anticodon binding domain UIB01_RS00045 PF02092 Glycyl-tRNA synthetase beta subunit UIB01_RS00050 PF02091 Glycyl-tRNA synthetase alpha subunit UIB01_RS00055 PF03352 Methyladenine glycosylase UIB01_RS00075 PF00005 ABC transporter UIB01_RS00080 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS00085 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS00090 PF00497 Bacterial extracellular solute-binding proteins, family 3 UIB01_RS00095 PF02080 TrkA-C domain UIB01_RS00095 PF02254 TrkA-N domain UIB01_RS00100 PF01189 16S rRNA methyltransferase RsmB/F UIB01_RS00100 PF01029 NusB family UIB01_RS00105 PF02911 Formyl transferase, C-terminal domain UIB01_RS00105 PF00551 Formyl transferase UIB01_RS00110 PF01327 Polypeptide deformylase UIB01_RS00115 PF01476 LysM domain UIB01_RS00120 PF02481 DNA recombination-mediator protein A UIB01_RS00120 PF17782 DprA winged helix domain UIB01_RS00125 PF01300 Telomere recombination UIB01_RS00130 PF00107 Zinc-binding dehydrogenase UIB01_RS00130 PF08240 Alcohol dehydrogenase GroES-like domain UIB01_RS00135 PF01218 Coproporphyrinogen III oxidase UIB01_RS00140 PF08501 Shikimate dehydrogenase substrate binding domain UIB01_RS00140 PF18317 Shikimate 5'-dehydrogenase C-terminal domain UIB01_RS00140 PF01488 Shikimate / quinate 5-dehydrogenase UIB01_RS00155 PF00768 D-alanyl-D-alanine carboxypeptidase UIB01_RS00190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I UIB01_RS00190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II UIB01_RS00190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III UIB01_RS00190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain UIB01_RS00205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS00205 PF13426 PAS domain UIB01_RS00205 PF00072 Response regulator receiver domain UIB01_RS00210 PF03466 LysR substrate binding domain UIB01_RS00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS00215 PF04239 Protein of unknown function (DUF421) UIB01_RS00240 PF00005 ABC transporter UIB01_RS00240 PF00664 ABC transporter transmembrane region UIB01_RS00280 PF02798 Glutathione S-transferase, N-terminal domain UIB01_RS00285 PF01381 Helix-turn-helix UIB01_RS00290 PF07804 HipA-like C-terminal domain UIB01_RS00290 PF13657 HipA N-terminal domain UIB01_RS00310 PF00290 Tryptophan synthase alpha chain UIB01_RS00315 PF00291 Pyridoxal-phosphate dependent enzyme UIB01_RS00320 PF03466 LysR substrate binding domain UIB01_RS00320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS00325 PF16363 GDP-mannose 4,6 dehydratase UIB01_RS00335 PF03275 UDP-galactopyranose mutase UIB01_RS00345 PF00664 ABC transporter transmembrane region UIB01_RS00345 PF00005 ABC transporter UIB01_RS00350 PF13619 KTSC domain UIB01_RS00355 PF07311 Dodecin UIB01_RS00360 PF00999 Sodium/hydrogen exchanger family UIB01_RS00365 PF00296 Luciferase-like monooxygenase UIB01_RS00405 PF16868 NMT1-like family UIB01_RS00420 PF12706 Beta-lactamase superfamily domain UIB01_RS00430 PF07969 Amidohydrolase family UIB01_RS00435 PF00005 ABC transporter UIB01_RS00440 PF00005 ABC transporter UIB01_RS00445 PF06007 Phosphonate metabolism protein PhnJ UIB01_RS00450 PF05861 Bacterial phosphonate metabolism protein (PhnI) UIB01_RS00460 PF06754 Phosphonate metabolism protein PhnG UIB01_RS00465 PF00392 Bacterial regulatory proteins, gntR family UIB01_RS00465 PF07702 UTRA domain UIB01_RS00470 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS00480 PF00005 ABC transporter UIB01_RS00485 PF00106 short chain dehydrogenase UIB01_RS00490 PF16957 Malonate decarboxylase, alpha subunit, transporter UIB01_RS00495 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase UIB01_RS00500 PF06857 Malonate decarboxylase delta subunit (MdcD) UIB01_RS00505 PF01039 Carboxyl transferase domain UIB01_RS00515 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG UIB01_RS00520 PF00698 Acyl transferase domain UIB01_RS00535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS00535 PF16591 Helical bimodular sensor domain UIB01_RS00535 PF00672 HAMP domain UIB01_RS00540 PF01266 FAD dependent oxidoreductase UIB01_RS00545 PF03466 LysR substrate binding domain UIB01_RS00545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS00555 PF00877 NlpC/P60 family UIB01_RS00555 PF01476 LysM domain UIB01_RS00555 PF08239 Bacterial SH3 domain UIB01_RS00565 PF04717 Type VI secretion system, phage-baseplate injector UIB01_RS00570 PF00158 Sigma-54 interaction domain UIB01_RS00570 PF02954 Bacterial regulatory protein, Fis family UIB01_RS00570 PF00072 Response regulator receiver domain UIB01_RS00575 PF17871 AAA lid domain UIB01_RS00575 PF10431 C-terminal, D2-small domain, of ClpB protein UIB01_RS00575 PF07724 AAA domain (Cdc48 subfamily) UIB01_RS00575 PF00004 ATPase family associated with various cellular activities (AAA) UIB01_RS00585 PF05947 Type VI secretion system, TssF UIB01_RS00615 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath UIB01_RS00630 PF01263 Aldose 1-epimerase UIB01_RS00635 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS00640 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS00645 PF00497 Bacterial extracellular solute-binding proteins, family 3 UIB01_RS00650 PF00005 ABC transporter UIB01_RS00655 PF02028 BCCT, betaine/carnitine/choline family transporter UIB01_RS00685 PF12307 Protein of unknown function (DUF3631) UIB01_RS00690 PF08401 Domain of unknown function (DUF1738) UIB01_RS00690 PF13362 Toprim domain UIB01_RS00690 PF18818 Metallopeptidase superfamily domain UIB01_RS00720 PF13356 Arm DNA-binding domain UIB01_RS00720 PF00589 Phage integrase family UIB01_RS00730 PF04362 Bacterial Fe(2+) trafficking UIB01_RS00735 PF10576 Iron-sulfur binding domain of endonuclease III UIB01_RS00735 PF00633 Helix-hairpin-helix motif UIB01_RS00735 PF00730 HhH-GPD superfamily base excision DNA repair protein UIB01_RS00735 PF14815 NUDIX domain UIB01_RS00750 PF00005 ABC transporter UIB01_RS00755 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS00765 PF08376 Nitrate and nitrite sensing UIB01_RS00765 PF03861 ANTAR domain UIB01_RS00770 PF00475 Imidazoleglycerol-phosphate dehydratase UIB01_RS00775 PF00117 Glutamine amidotransferase class-I UIB01_RS00785 PF00977 Histidine biosynthesis protein UIB01_RS00790 PF00977 Histidine biosynthesis protein UIB01_RS00810 PF13180 PDZ domain UIB01_RS00810 PF03572 Peptidase family S41 UIB01_RS00815 PF01551 Peptidase family M23 UIB01_RS00820 PF06415 BPG-independent PGAM N-terminus (iPGM_N) UIB01_RS00820 PF01676 Metalloenzyme superfamily UIB01_RS00825 PF00581 Rhodanese-like domain UIB01_RS00830 PF00462 Glutaredoxin UIB01_RS00835 PF02556 Preprotein translocase subunit SecB UIB01_RS00840 PF00107 Zinc-binding dehydrogenase UIB01_RS00840 PF08240 Alcohol dehydrogenase GroES-like domain UIB01_RS00855 PF01812 5-formyltetrahydrofolate cyclo-ligase family UIB01_RS00860 PF05164 Cell division protein ZapA UIB01_RS00870 PF03695 Uncharacterised protein family (UPF0149) UIB01_RS00875 PF00557 Metallopeptidase family M24 UIB01_RS00875 PF05195 Aminopeptidase P, N-terminal domain UIB01_RS00880 PF01494 FAD binding domain UIB01_RS00890 PF01494 FAD binding domain UIB01_RS00900 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS00905 PF01571 Aminomethyltransferase folate-binding domain UIB01_RS00905 PF08669 Glycine cleavage T-protein C-terminal barrel domain UIB01_RS00910 PF01597 Glycine cleavage H-protein UIB01_RS00915 PF02347 Glycine cleavage system P-protein UIB01_RS00920 PF01926 50S ribosome-binding GTPase UIB01_RS00925 PF00034 Cytochrome c UIB01_RS00930 PF01323 DSBA-like thioredoxin domain UIB01_RS00940 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS00945 PF01510 N-acetylmuramoyl-L-alanine amidase UIB01_RS00955 PF08448 PAS fold UIB01_RS00955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS00955 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS00955 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB UIB01_RS00955 PF00672 HAMP domain UIB01_RS00960 PF02954 Bacterial regulatory protein, Fis family UIB01_RS00960 PF00158 Sigma-54 interaction domain UIB01_RS00960 PF00072 Response regulator receiver domain UIB01_RS00980 PF07670 Nucleoside recognition UIB01_RS00990 PF16868 NMT1-like family UIB01_RS00995 PF00360 Phytochrome region UIB01_RS00995 PF00563 EAL domain UIB01_RS00995 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS00995 PF01590 GAF domain UIB01_RS01000 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS01000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS01005 PF00486 Transcriptional regulatory protein, C terminal UIB01_RS01005 PF00072 Response regulator receiver domain UIB01_RS01010 PF03573 outer membrane porin, OprD family UIB01_RS01025 PF01970 Tripartite tricarboxylate transporter TctA family UIB01_RS01030 PF05145 Transition state regulatory protein AbrB UIB01_RS01035 PF02690 Na+/Pi-cotransporter UIB01_RS01045 PF17946 RecC C-terminal domain UIB01_RS01050 PF13361 UvrD-like helicase C-terminal domain UIB01_RS01050 PF12705 PD-(D/E)XK nuclease superfamily UIB01_RS01050 PF00580 UvrD/REP helicase N-terminal domain UIB01_RS01055 PF13538 UvrD-like helicase C-terminal domain UIB01_RS01070 PF13426 PAS domain UIB01_RS01070 PF08448 PAS fold UIB01_RS01070 PF08447 PAS fold UIB01_RS01070 PF05231 MASE1 UIB01_RS01070 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS01070 PF00563 EAL domain UIB01_RS01075 PF03061 Thioesterase superfamily UIB01_RS01080 PF12849 PBP superfamily domain UIB01_RS01085 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS01090 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS01095 PF00005 ABC transporter UIB01_RS01100 PF01895 PhoU domain UIB01_RS01105 PF03466 LysR substrate binding domain UIB01_RS01105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS01115 PF01926 50S ribosome-binding GTPase UIB01_RS01115 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal UIB01_RS01125 PF03009 Glycerophosphoryl diester phosphodiesterase family UIB01_RS01130 PF00186 Dihydrofolate reductase UIB01_RS01155 PF00920 Dehydratase family UIB01_RS01165 PF17785 PUA-like domain UIB01_RS01165 PF10672 S-adenosylmethionine-dependent methyltransferase UIB01_RS01170 PF01965 DJ-1/PfpI family UIB01_RS01180 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain UIB01_RS01180 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain UIB01_RS01180 PF06827 Zinc finger found in FPG and IleRS UIB01_RS01200 PF00037 4Fe-4S binding domain UIB01_RS01205 PF01467 Cytidylyltransferase-like UIB01_RS01210 PF05199 GMC oxidoreductase UIB01_RS01210 PF00732 GMC oxidoreductase UIB01_RS01220 PF00171 Aldehyde dehydrogenase family UIB01_RS01225 PF00440 Bacterial regulatory proteins, tetR family UIB01_RS01230 PF00561 alpha/beta hydrolase fold UIB01_RS01245 PF05193 Peptidase M16 inactive domain UIB01_RS01250 PF00675 Insulinase (Peptidase family M16) UIB01_RS01250 PF05193 Peptidase M16 inactive domain UIB01_RS01255 PF00448 SRP54-type protein, GTPase domain UIB01_RS01255 PF02881 SRP54-type protein, helical bundle domain UIB01_RS01260 PF00005 ABC transporter UIB01_RS01265 PF18075 FtsX extracellular domain UIB01_RS01270 PF04545 Sigma-70, region 4 UIB01_RS01270 PF00140 Sigma-70 factor, region 1.2 UIB01_RS01270 PF04542 Sigma-70 region 2 UIB01_RS01275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS01275 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS01275 PF00672 HAMP domain UIB01_RS01275 PF17149 Periplasmic sensor domain found in signal transduction proteins UIB01_RS01275 PF00072 Response regulator receiver domain UIB01_RS01275 PF01627 Hpt domain UIB01_RS01280 PF00563 EAL domain UIB01_RS01280 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS01280 PF03707 Bacterial signalling protein N terminal repeat UIB01_RS01285 PF00912 Transglycosylase UIB01_RS01290 PF04241 Protein of unknown function (DUF423) UIB01_RS01295 PF05690 Thiazole biosynthesis protein ThiG UIB01_RS01295 PF02597 ThiS family UIB01_RS01300 PF05690 Thiazole biosynthesis protein ThiG UIB01_RS01305 PF02390 Putative methyltransferase UIB01_RS01310 PF07044 Protein of unknown function (DUF1329) UIB01_RS01315 PF00696 Amino acid kinase family UIB01_RS01320 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain UIB01_RS01320 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain UIB01_RS01330 PF13520 Amino acid permease UIB01_RS01345 PF06969 HemN C-terminal domain UIB01_RS01345 PF04055 Radical SAM superfamily UIB01_RS01350 PF01725 Ham1 family UIB01_RS01360 PF00561 alpha/beta hydrolase fold UIB01_RS01360 PF07021 Methionine biosynthesis protein MetW UIB01_RS01365 PF00561 alpha/beta hydrolase fold UIB01_RS01370 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal UIB01_RS01370 PF01926 50S ribosome-binding GTPase UIB01_RS01375 PF02325 YGGT family UIB01_RS01380 PF03807 NADP oxidoreductase coenzyme F420-dependent UIB01_RS01380 PF14748 Pyrroline-5-carboxylate reductase dimerisation UIB01_RS01385 PF01168 Alanine racemase, N-terminal domain UIB01_RS01390 PF00437 Type II/IV secretion system protein UIB01_RS01395 PF00437 Type II/IV secretion system protein UIB01_RS01415 PF01979 Amidohydrolase family UIB01_RS01420 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain UIB01_RS01420 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain UIB01_RS01425 PF00156 Phosphoribosyl transferase domain UIB01_RS01430 PF03652 Holliday junction resolvase UIB01_RS01435 PF02622 Uncharacterized ACR, COG1678 UIB01_RS01445 PF02951 Prokaryotic glutathione synthetase, N-terminal domain UIB01_RS01445 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain UIB01_RS01450 PF00072 Response regulator receiver domain UIB01_RS01455 PF00072 Response regulator receiver domain UIB01_RS01460 PF01584 CheW-like domain UIB01_RS01465 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term UIB01_RS01465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS01470 PF03705 CheR methyltransferase, all-alpha domain UIB01_RS01470 PF01739 CheR methyltransferase, SAM binding domain UIB01_RS01475 PF02895 Signal transducing histidine kinase, homodimeric domain UIB01_RS01475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS01475 PF01627 Hpt domain UIB01_RS01475 PF00072 Response regulator receiver domain UIB01_RS01475 PF01584 CheW-like domain UIB01_RS01480 PF00072 Response regulator receiver domain UIB01_RS01480 PF01339 CheB methylesterase UIB01_RS01490 PF04452 RNA methyltransferase UIB01_RS01495 PF00202 Aminotransferase class-III UIB01_RS01500 PF01292 Prokaryotic cytochrome b561 UIB01_RS01505 PF04264 YceI-like domain UIB01_RS01510 PF00529 HlyD membrane-fusion protein of T1SS UIB01_RS01510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UIB01_RS01515 PF00873 AcrB/AcrD/AcrF family UIB01_RS01520 PF08139 Prokaryotic membrane lipoprotein lipid attachment site UIB01_RS01520 PF02321 Outer membrane efflux protein UIB01_RS01525 PF00270 DEAD/DEAH box helicase UIB01_RS01525 PF00271 Helicase conserved C-terminal domain UIB01_RS01530 PF02219 Methylenetetrahydrofolate reductase UIB01_RS01535 PF05221 S-adenosyl-L-homocysteine hydrolase UIB01_RS01535 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain UIB01_RS01555 PF01653 NAD-dependent DNA ligase adenylation domain UIB01_RS01555 PF03120 NAD-dependent DNA ligase OB-fold domain UIB01_RS01560 PF00175 Oxidoreductase NAD-binding domain UIB01_RS01560 PF00111 2Fe-2S iron-sulfur cluster binding domain UIB01_RS01560 PF00970 Oxidoreductase FAD-binding domain UIB01_RS01565 PF00005 ABC transporter UIB01_RS01570 PF01061 ABC-2 type transporter UIB01_RS01580 PF02773 S-adenosylmethionine synthetase, C-terminal domain UIB01_RS01580 PF00438 S-adenosylmethionine synthetase, N-terminal domain UIB01_RS01580 PF02772 S-adenosylmethionine synthetase, central domain UIB01_RS01595 PF02668 Taurine catabolism dioxygenase TauD, TfdA family UIB01_RS01600 PF03466 LysR substrate binding domain UIB01_RS01600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS01605 PF00456 Transketolase, thiamine diphosphate binding domain UIB01_RS01605 PF02780 Transketolase, C-terminal domain UIB01_RS01605 PF02779 Transketolase, pyrimidine binding domain UIB01_RS01610 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain UIB01_RS01610 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain UIB01_RS01615 PF00162 Phosphoglycerate kinase UIB01_RS01630 PF01116 Fructose-bisphosphate aldolase class-II UIB01_RS01655 PF03707 Bacterial signalling protein N terminal repeat UIB01_RS01655 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS01655 PF00563 EAL domain UIB01_RS01680 PF12805 FUSC-like inner membrane protein yccS UIB01_RS01685 PF00270 DEAD/DEAH box helicase UIB01_RS01685 PF00271 Helicase conserved C-terminal domain UIB01_RS01685 PF03880 DbpA RNA binding domain UIB01_RS01700 PF00474 Sodium:solute symporter family UIB01_RS01720 PF01274 Malate synthase UIB01_RS01730 PF00892 EamA-like transporter family UIB01_RS01740 PF01204 Trehalase UIB01_RS01750 PF02254 TrkA-N domain UIB01_RS01750 PF02080 TrkA-C domain UIB01_RS01750 PF00999 Sodium/hydrogen exchanger family UIB01_RS01775 PF01145 SPFH domain / Band 7 family UIB01_RS01775 PF16200 C-terminal region of band_7 UIB01_RS01790 PF00106 short chain dehydrogenase UIB01_RS01800 PF00672 HAMP domain UIB01_RS01800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS01800 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS01800 PF01627 Hpt domain UIB01_RS01800 PF00072 Response regulator receiver domain UIB01_RS01800 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) UIB01_RS01805 PF03705 CheR methyltransferase, all-alpha domain UIB01_RS01805 PF01739 CheR methyltransferase, SAM binding domain UIB01_RS01810 PF01339 CheB methylesterase UIB01_RS01815 PF00072 Response regulator receiver domain UIB01_RS01815 PF09456 RcsC Alpha-Beta-Loop (ABL) UIB01_RS01815 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS01815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS01820 PF02696 Uncharacterized ACR, YdiU/UPF0061 family UIB01_RS01825 PF00924 Mechanosensitive ion channel UIB01_RS01825 PF12795 Mechanosensitive ion channel porin domain UIB01_RS01825 PF12794 Mechanosensitive ion channel inner membrane domain 1 UIB01_RS01830 PF03471 Transporter associated domain UIB01_RS01830 PF00999 Sodium/hydrogen exchanger family UIB01_RS01830 PF02080 TrkA-C domain UIB01_RS01835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UIB01_RS01835 PF12806 Acetyl-CoA dehydrogenase C-terminal like UIB01_RS01835 PF02770 Acyl-CoA dehydrogenase, middle domain UIB01_RS01835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UIB01_RS01840 PF00348 Polyprenyl synthetase UIB01_RS01845 PF01070 FMN-dependent dehydrogenase UIB01_RS01850 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase UIB01_RS01860 PF01593 Flavin containing amine oxidoreductase UIB01_RS01870 PF04116 Fatty acid hydroxylase superfamily UIB01_RS01875 PF03060 Nitronate monooxygenase UIB01_RS01880 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ UIB01_RS01885 PF01636 Phosphotransferase enzyme family UIB01_RS01890 PF00156 Phosphoribosyl transferase domain UIB01_RS01895 PF06968 Biotin and Thiamin Synthesis associated domain UIB01_RS01895 PF04055 Radical SAM superfamily UIB01_RS01900 PF00155 Aminotransferase class I and II UIB01_RS01905 PF12697 Alpha/beta hydrolase family UIB01_RS01905 PF08241 Methyltransferase domain UIB01_RS01910 PF08241 Methyltransferase domain UIB01_RS01925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UIB01_RS01925 PF02770 Acyl-CoA dehydrogenase, middle domain UIB01_RS01925 PF12806 Acetyl-CoA dehydrogenase C-terminal like UIB01_RS01925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UIB01_RS01930 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS01935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UIB01_RS01935 PF02770 Acyl-CoA dehydrogenase, middle domain UIB01_RS01935 PF12806 Acetyl-CoA dehydrogenase C-terminal like UIB01_RS01935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UIB01_RS01940 PF01625 Peptide methionine sulfoxide reductase UIB01_RS01945 PF00563 EAL domain UIB01_RS01945 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS01945 PF03707 Bacterial signalling protein N terminal repeat UIB01_RS01955 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UIB01_RS01955 PF00364 Biotin-requiring enzyme UIB01_RS01955 PF02817 e3 binding domain UIB01_RS01960 PF17831 Pyruvate dehydrogenase E1 component middle domain UIB01_RS01960 PF00456 Transketolase, thiamine diphosphate binding domain UIB01_RS01965 PF08335 GlnD PII-uridylyltransferase UIB01_RS01965 PF03710 Glutamate-ammonia ligase adenylyltransferase UIB01_RS01970 PF01063 Amino-transferase class IV UIB01_RS01975 PF01075 Glycosyltransferase family 9 (heptosyltransferase) UIB01_RS01980 PF01075 Glycosyltransferase family 9 (heptosyltransferase) UIB01_RS01985 PF00534 Glycosyl transferases group 1 UIB01_RS01985 PF13439 Glycosyltransferase Family 4 UIB01_RS02015 PF02543 Carbamoyltransferase N-terminus UIB01_RS02015 PF16861 Carbamoyltransferase C-terminus UIB01_RS02020 PF00534 Glycosyl transferases group 1 UIB01_RS02020 PF13439 Glycosyltransferase Family 4 UIB01_RS02030 PF05159 Capsule polysaccharide biosynthesis protein UIB01_RS02055 PF00005 ABC transporter UIB01_RS02055 PF00664 ABC transporter transmembrane region UIB01_RS02070 PF01467 Cytidylyltransferase-like UIB01_RS02070 PF00294 pfkB family carbohydrate kinase UIB01_RS02080 PF00248 Aldo/keto reductase family UIB01_RS02085 PF01266 FAD dependent oxidoreductase UIB01_RS02090 PF00893 Small Multidrug Resistance protein UIB01_RS02095 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) UIB01_RS02100 PF02321 Outer membrane efflux protein UIB01_RS02105 PF01964 Radical SAM ThiC family UIB01_RS02105 PF13667 ThiC-associated domain UIB01_RS02115 PF00293 NUDIX domain UIB01_RS02125 PF00149 Calcineurin-like phosphoesterase UIB01_RS02130 PF05728 Uncharacterised protein family (UPF0227) UIB01_RS02135 PF00204 DNA gyrase B UIB01_RS02135 PF00986 DNA gyrase B subunit, carboxyl terminus UIB01_RS02135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS02135 PF01751 Toprim domain UIB01_RS02150 PF00521 DNA gyrase/topoisomerase IV, subunit A UIB01_RS02150 PF03989 DNA gyrase C-terminal domain, beta-propeller UIB01_RS02175 PF08240 Alcohol dehydrogenase GroES-like domain UIB01_RS02175 PF00107 Zinc-binding dehydrogenase UIB01_RS02190 PF02666 Phosphatidylserine decarboxylase UIB01_RS02195 PF00581 Rhodanese-like domain UIB01_RS02205 PF01618 MotA/TolQ/ExbB proton channel family UIB01_RS02210 PF13677 Membrane MotB of proton-channel complex MotA/MotB UIB01_RS02210 PF00691 OmpA family UIB01_RS02215 PF03193 RsgA GTPase UIB01_RS02225 PF00929 Exonuclease UIB01_RS02230 PF13460 NAD(P)H-binding UIB01_RS02240 PF01575 MaoC like domain UIB01_RS02245 PF03788 LrgA family UIB01_RS02250 PF04172 LrgB-like family UIB01_RS02260 PF09335 SNARE associated Golgi protein UIB01_RS02265 PF00171 Aldehyde dehydrogenase family UIB01_RS02270 PF01467 Cytidylyltransferase-like UIB01_RS02280 PF02590 Predicted SPOUT methyltransferase UIB01_RS02285 PF03717 Penicillin-binding Protein dimerisation domain UIB01_RS02285 PF00905 Penicillin binding protein transpeptidase domain UIB01_RS02290 PF01098 Cell cycle protein UIB01_RS02295 PF13406 Transglycosylase SLT domain UIB01_RS02300 PF03330 Lytic transglycolase UIB01_RS02300 PF05036 Sporulation related domain UIB01_RS02305 PF00768 D-alanyl-D-alanine carboxypeptidase UIB01_RS02305 PF07943 Penicillin-binding protein 5, C-terminal domain UIB01_RS02310 PF04359 Protein of unknown function (DUF493) UIB01_RS02315 PF03099 Biotin/lipoate A/B protein ligase family UIB01_RS02320 PF04055 Radical SAM superfamily UIB01_RS02320 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family UIB01_RS02330 PF13406 Transglycosylase SLT domain UIB01_RS02335 PF03889 Alternative ribosome-rescue factor A UIB01_RS02350 PF08264 Anticodon-binding domain of tRNA UIB01_RS02350 PF09334 tRNA synthetases class I (M) UIB01_RS02350 PF13603 Leucyl-tRNA synthetase, Domain 2 UIB01_RS02350 PF00133 tRNA synthetases class I (I, L, M and V) UIB01_RS02365 PF00795 Carbon-nitrogen hydrolase UIB01_RS02370 PF03471 Transporter associated domain UIB01_RS02370 PF00571 CBS domain UIB01_RS02375 PF02130 Uncharacterized protein family UPF0054 UIB01_RS02380 PF02562 PhoH-like protein UIB01_RS02385 PF04055 Radical SAM superfamily UIB01_RS02385 PF00919 Uncharacterized protein family UPF0004 UIB01_RS02385 PF01938 TRAM domain UIB01_RS02400 PF00202 Aminotransferase class-III UIB01_RS02405 PF02581 Thiamine monophosphate synthase UIB01_RS02410 PF02581 Thiamine monophosphate synthase UIB01_RS02410 PF08543 Phosphomethylpyrimidine kinase UIB01_RS02415 PF00072 Response regulator receiver domain UIB01_RS02415 PF00672 HAMP domain UIB01_RS02415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS02415 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS02415 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) UIB01_RS02415 PF01627 Hpt domain UIB01_RS02420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UIB01_RS02420 PF18158 Adaptive response protein AidB N-terminal domain UIB01_RS02420 PF02770 Acyl-CoA dehydrogenase, middle domain UIB01_RS02430 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain UIB01_RS02430 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain UIB01_RS02435 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus UIB01_RS02435 PF01048 Phosphorylase superfamily UIB01_RS02445 PF04955 HupE / UreJ protein UIB01_RS02450 PF02492 CobW/HypB/UreG, nucleotide-binding domain UIB01_RS02455 PF01730 UreF UIB01_RS02460 PF02814 UreE urease accessory protein, N-terminal domain UIB01_RS02460 PF05194 UreE urease accessory protein, C-terminal domain UIB01_RS02485 PF01258 Prokaryotic dksA/traR C4-type zinc finger UIB01_RS02490 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS02490 PF00360 Phytochrome region UIB01_RS02490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS02490 PF01590 GAF domain UIB01_RS02490 PF08446 PAS fold UIB01_RS02495 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin UIB01_RS02500 PF00449 Urease alpha-subunit, N-terminal domain UIB01_RS02500 PF01979 Amidohydrolase family UIB01_RS02505 PF00699 Urease beta subunit UIB01_RS02515 PF00547 Urease, gamma subunit UIB01_RS02520 PF01774 UreD urease accessory protein UIB01_RS02525 PF00690 Cation transporter/ATPase, N-terminus UIB01_RS02525 PF00689 Cation transporting ATPase, C-terminus UIB01_RS02530 PF00005 ABC transporter UIB01_RS02535 PF12399 Branched-chain amino acid ATP-binding cassette transporter UIB01_RS02535 PF00005 ABC transporter UIB01_RS02540 PF02653 Branched-chain amino acid transport system / permease component UIB01_RS02545 PF02653 Branched-chain amino acid transport system / permease component UIB01_RS02555 PF00849 RNA pseudouridylate synthase UIB01_RS02570 PF13404 AsnC-type helix-turn-helix domain UIB01_RS02570 PF01037 Lrp/AsnC ligand binding domain UIB01_RS02575 PF16916 Dimerisation domain of Zinc Transporter UIB01_RS02575 PF01545 Cation efflux family UIB01_RS02590 PF04408 Helicase associated domain (HA2) UIB01_RS02590 PF00270 DEAD/DEAH box helicase UIB01_RS02590 PF00271 Helicase conserved C-terminal domain UIB01_RS02590 PF08482 ATP-dependent helicase C-terminal UIB01_RS02620 PF13292 1-deoxy-D-xylulose-5-phosphate synthase UIB01_RS02620 PF02779 Transketolase, pyrimidine binding domain UIB01_RS02620 PF02780 Transketolase, C-terminal domain UIB01_RS02625 PF00348 Polyprenyl synthetase UIB01_RS02630 PF02609 Exonuclease VII small subunit UIB01_RS02640 PF06276 Ferric iron reductase FhuF-like transporter UIB01_RS02640 PF04183 IucA / IucC family UIB01_RS02655 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) UIB01_RS02660 PF00282 Pyridoxal-dependent decarboxylase conserved domain UIB01_RS02670 PF00563 EAL domain UIB01_RS02670 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS02670 PF13426 PAS domain UIB01_RS02680 PF17151 Periplasmic sensor domain UIB01_RS02680 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS02690 PF02586 SOS response associated peptidase (SRAP) UIB01_RS02695 PF00717 Peptidase S24-like UIB01_RS02725 PF04851 Type III restriction enzyme, res subunit UIB01_RS02725 PF08463 EcoEI R protein C-terminal UIB01_RS02725 PF00271 Helicase conserved C-terminal domain UIB01_RS02725 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) UIB01_RS02760 PF00719 Inorganic pyrophosphatase UIB01_RS02765 PF06167 Glucose-regulated metallo-peptidase M90 UIB01_RS02775 PF09423 PhoD-like phosphatase UIB01_RS02775 PF16655 PhoD-like phosphatase, N-terminal domain UIB01_RS02780 PF05985 Ethanolamine ammonia-lyase light chain (EutC) UIB01_RS02785 PF06751 Ethanolamine ammonia lyase large subunit (EutB) UIB01_RS02790 PF13520 Amino acid permease UIB01_RS02795 PF00171 Aldehyde dehydrogenase family UIB01_RS02800 PF02875 Mur ligase family, glutamate ligase domain UIB01_RS02800 PF08245 Mur ligase middle domain UIB01_RS02800 PF01225 Mur ligase family, catalytic domain UIB01_RS02805 PF02441 Flavoprotein UIB01_RS02815 PF01434 Peptidase family M41 UIB01_RS02815 PF00004 ATPase family associated with various cellular activities (AAA) UIB01_RS02815 PF17862 AAA+ lid domain UIB01_RS02815 PF06480 FtsH Extracellular UIB01_RS02820 PF08331 Domain of unknown function (DUF1730) UIB01_RS02825 PF01256 Carbohydrate kinase UIB01_RS02825 PF03853 YjeF-related protein N-terminus UIB01_RS02830 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE UIB01_RS02835 PF01520 N-acetylmuramoyl-L-alanine amidase UIB01_RS02835 PF11741 AMIN domain UIB01_RS02840 PF01119 DNA mismatch repair protein, C-terminal domain UIB01_RS02840 PF08676 MutL C terminal dimerisation domain UIB01_RS02850 PF17209 Hfq protein UIB01_RS02855 PF16360 GTP-binding GTPase Middle Region UIB01_RS02855 PF13167 GTP-binding GTPase N-terminal UIB01_RS02855 PF01926 50S ribosome-binding GTPase UIB01_RS02860 PF01145 SPFH domain / Band 7 family UIB01_RS02860 PF12221 Bacterial membrane protein N terminal UIB01_RS02865 PF01145 SPFH domain / Band 7 family UIB01_RS02870 PF13393 Histidyl-tRNA synthetase UIB01_RS02875 PF00709 Adenylosuccinate synthetase UIB01_RS02890 PF08461 Ribonuclease R winged-helix domain UIB01_RS02890 PF08206 Ribonuclease B OB domain UIB01_RS02890 PF00773 RNB domain UIB01_RS02890 PF00575 S1 RNA binding domain UIB01_RS02890 PF17876 Cold shock domain UIB01_RS02895 PF00588 SpoU rRNA Methylase family UIB01_RS02895 PF08032 RNA 2'-O ribose methyltransferase substrate binding UIB01_RS02900 PF00072 Response regulator receiver domain UIB01_RS02900 PF13188 PAS domain UIB01_RS02900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS02900 PF08448 PAS fold UIB01_RS02900 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS02905 PF01250 Ribosomal protein S6 UIB01_RS02910 PF01084 Ribosomal protein S18 UIB01_RS02920 PF03948 Ribosomal protein L9, C-terminal domain UIB01_RS02920 PF01281 Ribosomal protein L9, N-terminal domain UIB01_RS02925 PF00772 DnaB-like helicase N terminal domain UIB01_RS02925 PF03796 DnaB-like helicase C terminal domain UIB01_RS02930 PF01168 Alanine racemase, N-terminal domain UIB01_RS02930 PF00842 Alanine racemase, C-terminal domain UIB01_RS02935 PF03707 Bacterial signalling protein N terminal repeat UIB01_RS02935 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS02935 PF00563 EAL domain UIB01_RS02940 PF04055 Radical SAM superfamily UIB01_RS02940 PF08497 Radical SAM N-terminal UIB01_RS02940 PF11842 Domain of unknown function (DUF3362) UIB01_RS02945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS02950 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS02950 PF00072 Response regulator receiver domain UIB01_RS02960 PF00072 Response regulator receiver domain UIB01_RS02960 PF02954 Bacterial regulatory protein, Fis family UIB01_RS02960 PF00158 Sigma-54 interaction domain UIB01_RS02965 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS02965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS02975 PF13525 Outer membrane lipoprotein UIB01_RS02980 PF00849 RNA pseudouridylate synthase UIB01_RS02980 PF01479 S4 domain UIB01_RS02985 PF02578 Multi-copper polyphenol oxidoreductase laccase UIB01_RS02990 PF10431 C-terminal, D2-small domain, of ClpB protein UIB01_RS02990 PF07724 AAA domain (Cdc48 subfamily) UIB01_RS02990 PF17871 AAA lid domain UIB01_RS02990 PF00004 ATPase family associated with various cellular activities (AAA) UIB01_RS02990 PF02861 Clp amino terminal domain, pathogenicity island component UIB01_RS03010 PF07992 Pyridine nucleotide-disulphide oxidoreductase UIB01_RS03030 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain UIB01_RS03030 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain UIB01_RS03040 PF02129 X-Pro dipeptidyl-peptidase (S15 family) UIB01_RS03045 PF00579 tRNA synthetases class I (W and Y) UIB01_RS03050 PF03969 AFG1-like ATPase UIB01_RS03055 PF12833 Helix-turn-helix domain UIB01_RS03060 PF04493 Endonuclease V UIB01_RS03065 PF01510 N-acetylmuramoyl-L-alanine amidase UIB01_RS03075 PF12729 Four helix bundle sensory module for signal transduction UIB01_RS03075 PF00672 HAMP domain UIB01_RS03075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS03080 PF01026 TatD related DNase UIB01_RS03090 PF02805 Metal binding domain of Ada UIB01_RS03090 PF12833 Helix-turn-helix domain UIB01_RS03090 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain UIB01_RS03090 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain UIB01_RS03100 PF02321 Outer membrane efflux protein UIB01_RS03105 PF00873 AcrB/AcrD/AcrF family UIB01_RS03110 PF00529 HlyD membrane-fusion protein of T1SS UIB01_RS03110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UIB01_RS03115 PF00210 Ferritin-like domain UIB01_RS03120 PF00672 HAMP domain UIB01_RS03120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS03120 PF16591 Helical bimodular sensor domain UIB01_RS03125 PF06039 Malate:quinone oxidoreductase (Mqo) UIB01_RS03130 PF00376 MerR family regulatory protein UIB01_RS03130 PF09278 MerR, DNA binding UIB01_RS03135 PF00403 Heavy-metal-associated domain UIB01_RS03145 PF08361 MAATS-type transcriptional repressor, C-terminal region UIB01_RS03145 PF00440 Bacterial regulatory proteins, tetR family UIB01_RS03150 PF07690 Major Facilitator Superfamily UIB01_RS03155 PF00962 Adenosine/AMP deaminase UIB01_RS03160 PF01205 Uncharacterized protein family UPF0029 UIB01_RS03165 PF03860 Domain of Unknown Function (DUF326) UIB01_RS03175 PF07683 Cobalamin synthesis protein cobW C-terminal domain UIB01_RS03175 PF02492 CobW/HypB/UreG, nucleotide-binding domain UIB01_RS03180 PF01258 Prokaryotic dksA/traR C4-type zinc finger UIB01_RS03185 PF01613 Flavin reductase like domain UIB01_RS03190 PF00881 Nitroreductase family UIB01_RS03195 PF00561 alpha/beta hydrolase fold UIB01_RS03200 PF01042 Endoribonuclease L-PSP UIB01_RS03205 PF00857 Isochorismatase family UIB01_RS03210 PF00296 Luciferase-like monooxygenase UIB01_RS03215 PF00440 Bacterial regulatory proteins, tetR family UIB01_RS03215 PF08362 YcdC-like protein, C-terminal region UIB01_RS03230 PF12833 Helix-turn-helix domain UIB01_RS03230 PF01965 DJ-1/PfpI family UIB01_RS03235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UIB01_RS03250 PF02627 Carboxymuconolactone decarboxylase family UIB01_RS03260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UIB01_RS03265 PF13847 Methyltransferase domain UIB01_RS03280 PF07995 Glucose / Sorbosone dehydrogenase UIB01_RS03290 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS03290 PF00563 EAL domain UIB01_RS03290 PF03707 Bacterial signalling protein N terminal repeat UIB01_RS03290 PF13188 PAS domain UIB01_RS03305 PF02608 ABC transporter substrate-binding protein PnrA-like UIB01_RS03310 PF00005 ABC transporter UIB01_RS03320 PF02653 Branched-chain amino acid transport system / permease component UIB01_RS03330 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS03340 PF00313 'Cold-shock' DNA-binding domain UIB01_RS03345 PF03831 PhnA domain UIB01_RS03345 PF08274 PhnA Zinc-Ribbon UIB01_RS03350 PF03061 Thioesterase superfamily UIB01_RS03360 PF07969 Amidohydrolase family UIB01_RS03365 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin UIB01_RS03370 PF06628 Catalase-related immune-responsive UIB01_RS03370 PF00199 Catalase UIB01_RS03380 PF02560 Cyanate lyase C-terminal domain UIB01_RS03390 PF00155 Aminotransferase class I and II UIB01_RS03395 PF01329 Pterin 4 alpha carbinolamine dehydratase UIB01_RS03400 PF00351 Biopterin-dependent aromatic amino acid hydroxylase UIB01_RS03405 PF18024 Helix-turn-helix domain UIB01_RS03405 PF00158 Sigma-54 interaction domain UIB01_RS03410 PF01339 CheB methylesterase UIB01_RS03410 PF01739 CheR methyltransferase, SAM binding domain UIB01_RS03410 PF03705 CheR methyltransferase, all-alpha domain UIB01_RS03410 PF08448 PAS fold UIB01_RS03415 PF03313 Serine dehydratase alpha chain UIB01_RS03415 PF03315 Serine dehydratase beta chain UIB01_RS03420 PF07992 Pyridine nucleotide-disulphide oxidoreductase UIB01_RS03425 PF03480 Bacterial extracellular solute-binding protein, family 7 UIB01_RS03430 PF03480 Bacterial extracellular solute-binding protein, family 7 UIB01_RS03435 PF04343 Protein of unknown function, DUF488 UIB01_RS03450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UIB01_RS03450 PF02770 Acyl-CoA dehydrogenase, middle domain UIB01_RS03450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UIB01_RS03455 PF12801 4Fe-4S binding domain UIB01_RS03455 PF04205 FMN-binding domain UIB01_RS03460 PF00116 Cytochrome C oxidase subunit II, periplasmic domain UIB01_RS03460 PF18764 Nitrous oxide reductase propeller repeat UIB01_RS03460 PF18793 Nitrous oxide reductase propeller repeat 2 UIB01_RS03465 PF05048 Periplasmic copper-binding protein (NosD) UIB01_RS03470 PF00005 ABC transporter UIB01_RS03475 PF12679 ABC-2 family transporter protein UIB01_RS03480 PF05573 NosL UIB01_RS03485 PF02416 mttA/Hcf106 family UIB01_RS03500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS03505 PF00115 Cytochrome C and Quinol oxidase polypeptide I UIB01_RS03515 PF03466 LysR substrate binding domain UIB01_RS03515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS03525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UIB01_RS03525 PF14824 Sirohaem biosynthesis protein central UIB01_RS03525 PF10414 Sirohaem synthase dimerisation region UIB01_RS03530 PF13186 Iron-sulfur cluster-binding domain UIB01_RS03530 PF04055 Radical SAM superfamily UIB01_RS03535 PF03626 Prokaryotic Cytochrome C oxidase subunit IV UIB01_RS03540 PF00510 Cytochrome c oxidase subunit III UIB01_RS03545 PF07728 AAA domain (dynein-related subfamily) UIB01_RS03545 PF08406 CbbQ/NirQ/NorQ C-terminal UIB01_RS03550 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UIB01_RS03555 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UIB01_RS03560 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UIB01_RS03570 PF17805 AsnC-like ligand binding domain UIB01_RS03575 PF17805 AsnC-like ligand binding domain UIB01_RS03580 PF17805 AsnC-like ligand binding domain UIB01_RS03580 PF13404 AsnC-type helix-turn-helix domain UIB01_RS03585 PF17805 AsnC-like ligand binding domain UIB01_RS03590 PF00034 Cytochrome c UIB01_RS03595 PF00115 Cytochrome C and Quinol oxidase polypeptide I UIB01_RS03600 PF00092 von Willebrand factor type A domain UIB01_RS03620 PF04405 Domain of Unknown function (DUF542) UIB01_RS03620 PF01814 Hemerythrin HHE cation binding domain UIB01_RS03625 PF02954 Bacterial regulatory protein, Fis family UIB01_RS03625 PF00158 Sigma-54 interaction domain UIB01_RS03635 PF01136 Peptidase family U32 UIB01_RS03640 PF01136 Peptidase family U32 UIB01_RS03645 PF02036 SCP-2 sterol transfer family UIB01_RS03650 PF00156 Phosphoribosyl transferase domain UIB01_RS03655 PF02885 Glycosyl transferase family, helical bundle domain UIB01_RS03655 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain UIB01_RS03655 PF00591 Glycosyl transferase family, a/b domain UIB01_RS03660 PF00106 short chain dehydrogenase UIB01_RS03670 PF02667 Short chain fatty acid transporter UIB01_RS03680 PF00672 HAMP domain UIB01_RS03680 PF02743 Cache domain UIB01_RS03680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS03685 PF13404 AsnC-type helix-turn-helix domain UIB01_RS03685 PF01037 Lrp/AsnC ligand binding domain UIB01_RS03695 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UIB01_RS03695 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain UIB01_RS03700 PF00209 Sodium:neurotransmitter symporter family UIB01_RS03705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UIB01_RS03710 PF04209 homogentisate 1,2-dioxygenase UIB01_RS03720 PF02798 Glutathione S-transferase, N-terminal domain UIB01_RS03720 PF14497 Glutathione S-transferase, C-terminal domain UIB01_RS03725 PF00209 Sodium:neurotransmitter symporter family UIB01_RS03730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS03730 PF00672 HAMP domain UIB01_RS03730 PF02743 Cache domain UIB01_RS03745 PF00999 Sodium/hydrogen exchanger family UIB01_RS03745 PF02254 TrkA-N domain UIB01_RS03750 PF00271 Helicase conserved C-terminal domain UIB01_RS03750 PF00270 DEAD/DEAH box helicase UIB01_RS03760 PF08240 Alcohol dehydrogenase GroES-like domain UIB01_RS03760 PF00107 Zinc-binding dehydrogenase UIB01_RS03775 PF00850 Histone deacetylase domain UIB01_RS03780 PF13302 Acetyltransferase (GNAT) domain UIB01_RS03795 PF04228 Putative neutral zinc metallopeptidase UIB01_RS03825 PF00196 Bacterial regulatory proteins, luxR family UIB01_RS03825 PF00072 Response regulator receiver domain UIB01_RS03830 PF07730 Histidine kinase UIB01_RS03830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS03830 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term UIB01_RS03830 PF00672 HAMP domain UIB01_RS03835 PF07690 Major Facilitator Superfamily UIB01_RS03845 PF07690 Major Facilitator Superfamily UIB01_RS03850 PF00384 Molybdopterin oxidoreductase UIB01_RS03850 PF14710 Respiratory nitrate reductase alpha N-terminal UIB01_RS03850 PF01568 Molydopterin dinucleotide binding domain UIB01_RS03855 PF14711 Respiratory nitrate reductase beta C-terminal UIB01_RS03855 PF13247 4Fe-4S dicluster domain UIB01_RS03860 PF02613 Nitrate reductase delta subunit UIB01_RS03865 PF02665 Nitrate reductase gamma subunit UIB01_RS03870 PF09312 SurA N-terminal domain UIB01_RS03875 PF06463 Molybdenum Cofactor Synthesis C UIB01_RS03875 PF04055 Radical SAM superfamily UIB01_RS03880 PF00994 Probable molybdopterin binding domain UIB01_RS03885 PF03453 MoeA N-terminal region (domain I and II) UIB01_RS03885 PF03454 MoeA C-terminal region (domain IV) UIB01_RS03885 PF00994 Probable molybdopterin binding domain UIB01_RS03890 PF01292 Prokaryotic cytochrome b561 UIB01_RS03895 PF08521 Two-component sensor kinase N-terminal UIB01_RS03895 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS03895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS03900 PF00486 Transcriptional regulatory protein, C terminal UIB01_RS03900 PF00072 Response regulator receiver domain UIB01_RS03910 PF00106 short chain dehydrogenase UIB01_RS03920 PF00501 AMP-binding enzyme UIB01_RS03955 PF00486 Transcriptional regulatory protein, C terminal UIB01_RS03955 PF00072 Response regulator receiver domain UIB01_RS03960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS03960 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS03975 PF01219 Prokaryotic diacylglycerol kinase UIB01_RS04000 PF00970 Oxidoreductase FAD-binding domain UIB01_RS04000 PF00111 2Fe-2S iron-sulfur cluster binding domain UIB01_RS04000 PF00175 Oxidoreductase NAD-binding domain UIB01_RS04005 PF00753 Metallo-beta-lactamase superfamily UIB01_RS04010 PF05958 tRNA (Uracil-5-)-methyltransferase UIB01_RS04015 PF00860 Permease family UIB01_RS04020 PF01965 DJ-1/PfpI family UIB01_RS04025 PF13478 XdhC Rossmann domain UIB01_RS04025 PF02625 XdhC and CoxI family UIB01_RS04035 PF00111 2Fe-2S iron-sulfur cluster binding domain UIB01_RS04035 PF01799 [2Fe-2S] binding domain UIB01_RS04040 PF03450 CO dehydrogenase flavoprotein C-terminal domain UIB01_RS04040 PF00941 FAD binding domain in molybdopterin dehydrogenase UIB01_RS04045 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain UIB01_RS04045 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase UIB01_RS04075 PF05175 Methyltransferase small domain UIB01_RS04080 PF00175 Oxidoreductase NAD-binding domain UIB01_RS04080 PF00970 Oxidoreductase FAD-binding domain UIB01_RS04085 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain UIB01_RS04085 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UIB01_RS04090 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS04095 PF09345 Domain of unknown function (DUF1987) UIB01_RS04110 PF12848 ABC transporter UIB01_RS04110 PF00005 ABC transporter UIB01_RS04115 PF00464 Serine hydroxymethyltransferase UIB01_RS04125 PF07238 PilZ domain UIB01_RS04130 PF18073 Rubredoxin metal binding domain UIB01_RS04145 PF01741 Large-conductance mechanosensitive channel, MscL UIB01_RS04150 PF00034 Cytochrome c UIB01_RS04150 PF03150 Di-haem cytochrome c peroxidase UIB01_RS04155 PF05362 Lon protease (S16) C-terminal proteolytic domain UIB01_RS04155 PF13654 AAA domain UIB01_RS04165 PF03350 Uncharacterized protein family, UPF0114 UIB01_RS04175 PF04244 Deoxyribodipyrimidine photo-lyase-related protein UIB01_RS04180 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UIB01_RS04180 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase UIB01_RS04190 PF00348 Polyprenyl synthetase UIB01_RS04195 PF00829 Ribosomal prokaryotic L21 protein UIB01_RS04200 PF01016 Ribosomal L27 protein UIB01_RS04205 PF01926 50S ribosome-binding GTPase UIB01_RS04205 PF01018 GTP1/OBG UIB01_RS04210 PF00696 Amino acid kinase family UIB01_RS04210 PF01472 PUA domain UIB01_RS04215 PF05981 CreA protein UIB01_RS04220 PF01649 Ribosomal protein S20 UIB01_RS04225 PF03023 Lipid II flippase MurJ UIB01_RS04230 PF01687 Riboflavin kinase UIB01_RS04230 PF06574 FAD synthetase UIB01_RS04235 PF06827 Zinc finger found in FPG and IleRS UIB01_RS04235 PF00133 tRNA synthetases class I (I, L, M and V) UIB01_RS04235 PF08264 Anticodon-binding domain of tRNA UIB01_RS04240 PF01252 Signal peptidase (SPase) II UIB01_RS04245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UIB01_RS04250 PF02401 LytB protein UIB01_RS04255 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor UIB01_RS04255 PF07963 Prokaryotic N-terminal methylation motif UIB01_RS04260 PF05567 Neisseria PilC beta-propeller domain UIB01_RS04280 PF07963 Prokaryotic N-terminal methylation motif UIB01_RS04280 PF00114 Pilin (bacterial filament) UIB01_RS04285 PF07963 Prokaryotic N-terminal methylation motif UIB01_RS04285 PF14245 Type IV pilin PilA UIB01_RS04290 PF01266 FAD dependent oxidoreductase UIB01_RS04295 PF01253 Translation initiation factor SUI1 UIB01_RS04300 PF17810 Arginine decarboxylase helical bundle domain UIB01_RS04300 PF17944 Arginine decarboxylase C-terminal helical extension UIB01_RS04300 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain UIB01_RS04310 PF01554 MatE UIB01_RS04320 PF06977 SdiA-regulated UIB01_RS04340 PF13847 Methyltransferase domain UIB01_RS04350 PF00356 Bacterial regulatory proteins, lacI family UIB01_RS04350 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family UIB01_RS04355 PF05524 PEP-utilising enzyme, N-terminal UIB01_RS04355 PF00381 PTS HPr component phosphorylation site UIB01_RS04355 PF02896 PEP-utilising enzyme, TIM barrel domain UIB01_RS04355 PF00391 PEP-utilising enzyme, mobile domain UIB01_RS04355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UIB01_RS04360 PF00294 pfkB family carbohydrate kinase UIB01_RS04365 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UIB01_RS04365 PF02378 Phosphotransferase system, EIIC UIB01_RS04375 PF16658 Class II release factor RF3, C-terminal domain UIB01_RS04375 PF00009 Elongation factor Tu GTP binding domain UIB01_RS04375 PF03144 Elongation factor Tu domain 2 UIB01_RS04380 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain UIB01_RS04380 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain UIB01_RS04390 PF13640 2OG-Fe(II) oxygenase superfamily UIB01_RS04390 PF18331 PKHD-type hydroxylase C-terminal domain UIB01_RS04395 PF07715 TonB-dependent Receptor Plug Domain UIB01_RS04395 PF00593 TonB dependent receptor UIB01_RS04400 PF00175 Oxidoreductase NAD-binding domain UIB01_RS04400 PF00258 Flavodoxin UIB01_RS04400 PF00667 FAD binding domain UIB01_RS04420 PF00593 TonB dependent receptor UIB01_RS04420 PF07715 TonB-dependent Receptor Plug Domain UIB01_RS04430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS04430 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS04435 PF02954 Bacterial regulatory protein, Fis family UIB01_RS04435 PF00072 Response regulator receiver domain UIB01_RS04445 PF01476 LysM domain UIB01_RS04445 PF01551 Peptidase family M23 UIB01_RS04445 PF08525 Opacity-associated protein A N-terminal motif UIB01_RS04460 PF01699 Sodium/calcium exchanger protein UIB01_RS04465 PF01699 Sodium/calcium exchanger protein UIB01_RS04470 PF03330 Lytic transglycolase UIB01_RS04475 PF02934 GatB/GatE catalytic domain UIB01_RS04475 PF02637 GatB domain UIB01_RS04480 PF01425 Amidase UIB01_RS04485 PF02686 Glu-tRNAGln amidotransferase C subunit UIB01_RS04495 PF04085 rod shape-determining protein MreC UIB01_RS04510 PF02545 Maf-like protein UIB01_RS04515 PF10150 Ribonuclease E/G family UIB01_RS04515 PF00575 S1 RNA binding domain UIB01_RS04525 PF00795 Carbon-nitrogen hydrolase UIB01_RS04530 PF01523 Putative modulator of DNA gyrase UIB01_RS04535 PF04751 Protein of unknown function (DUF615) UIB01_RS04540 PF01523 Putative modulator of DNA gyrase UIB01_RS04545 PF00381 PTS HPr component phosphorylation site UIB01_RS04550 PF03668 P-loop ATPase protein family UIB01_RS04555 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UIB01_RS04560 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein UIB01_RS04565 PF00309 Sigma-54 factor, Activator interacting domain (AID) UIB01_RS04565 PF04963 Sigma-54 factor, core binding domain UIB01_RS04565 PF04552 Sigma-54, DNA binding domain UIB01_RS04570 PF00005 ABC transporter UIB01_RS04570 PF12399 Branched-chain amino acid ATP-binding cassette transporter UIB01_RS04575 PF03968 OstA-like protein UIB01_RS04590 PF00571 CBS domain UIB01_RS04590 PF01380 SIS domain UIB01_RS04595 PF00005 ABC transporter UIB01_RS04600 PF02405 Permease MlaE UIB01_RS04605 PF02470 MlaD protein UIB01_RS04610 PF05494 MlaC protein UIB01_RS04620 PF06146 Phosphate-starvation-inducible E UIB01_RS04630 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) UIB01_RS04635 PF01634 ATP phosphoribosyltransferase UIB01_RS04640 PF00815 Histidinol dehydrogenase UIB01_RS04645 PF00155 Aminotransferase class I and II UIB01_RS04650 PF13180 PDZ domain UIB01_RS04655 PF01784 NIF3 (NGG1p interacting factor 3) UIB01_RS04660 PF01507 Phosphoadenosine phosphosulfate reductase family UIB01_RS04665 PF00009 Elongation factor Tu GTP binding domain UIB01_RS04670 PF07963 Prokaryotic N-terminal methylation motif UIB01_RS04670 PF00114 Pilin (bacterial filament) UIB01_RS04675 PF00437 Type II/IV secretion system protein UIB01_RS04675 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain UIB01_RS04680 PF00482 Type II secretion system (T2SS), protein F UIB01_RS04685 PF06750 Bacterial Peptidase A24 N-terminal domain UIB01_RS04685 PF01478 Type IV leader peptidase family UIB01_RS04690 PF01121 Dephospho-CoA kinase UIB01_RS04695 PF03884 DNA gyrase inhibitor YacG UIB01_RS04705 PF00248 Aldo/keto reductase family UIB01_RS04710 PF00572 Ribosomal protein L13 UIB01_RS04715 PF00380 Ribosomal protein S9/S16 UIB01_RS04720 PF00355 Rieske [2Fe-2S] domain UIB01_RS04720 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal UIB01_RS04725 PF00032 Cytochrome b(C-terminal)/b6/petD UIB01_RS04725 PF00033 Cytochrome b/b6/petB UIB01_RS04730 PF02167 Cytochrome C1 family UIB01_RS04735 PF00043 Glutathione S-transferase, C-terminal domain UIB01_RS04735 PF02798 Glutathione S-transferase, N-terminal domain UIB01_RS04740 PF04386 Stringent starvation protein B UIB01_RS04745 PF04972 BON domain UIB01_RS04750 PF13580 SIS domain UIB01_RS04755 PF02021 Uncharacterised protein family UPF0102 UIB01_RS04760 PF04348 LppC putative lipoprotein UIB01_RS04765 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UIB01_RS04770 PF02381 MraZ protein, putative antitoxin-like UIB01_RS04775 PF01795 MraW methylase family UIB01_RS04780 PF04999 Cell division protein FtsL UIB01_RS04785 PF03717 Penicillin-binding Protein dimerisation domain UIB01_RS04785 PF00905 Penicillin binding protein transpeptidase domain UIB01_RS04790 PF01225 Mur ligase family, catalytic domain UIB01_RS04790 PF02875 Mur ligase family, glutamate ligase domain UIB01_RS04790 PF08245 Mur ligase middle domain UIB01_RS04795 PF08245 Mur ligase middle domain UIB01_RS04795 PF02875 Mur ligase family, glutamate ligase domain UIB01_RS04795 PF01225 Mur ligase family, catalytic domain UIB01_RS04800 PF00953 Glycosyl transferase family 4 UIB01_RS04800 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 UIB01_RS04805 PF02875 Mur ligase family, glutamate ligase domain UIB01_RS04805 PF08245 Mur ligase middle domain UIB01_RS04810 PF01098 Cell cycle protein UIB01_RS04815 PF04101 Glycosyltransferase family 28 C-terminal domain UIB01_RS04815 PF03033 Glycosyltransferase family 28 N-terminal domain UIB01_RS04820 PF01225 Mur ligase family, catalytic domain UIB01_RS04820 PF02875 Mur ligase family, glutamate ligase domain UIB01_RS04820 PF08245 Mur ligase middle domain UIB01_RS04825 PF07478 D-ala D-ala ligase C-terminus UIB01_RS04825 PF01820 D-ala D-ala ligase N-terminus UIB01_RS04830 PF03799 Cell division protein FtsQ UIB01_RS04830 PF08478 POTRA domain, FtsQ-type UIB01_RS04835 PF02491 SHS2 domain inserted in FTSA UIB01_RS04840 PF12327 FtsZ family, C-terminal domain UIB01_RS04840 PF00091 Tubulin/FtsZ family, GTPase domain UIB01_RS04845 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase UIB01_RS04865 PF07995 Glucose / Sorbosone dehydrogenase UIB01_RS04870 PF02308 MgtC family UIB01_RS04890 PF03641 Possible lysine decarboxylase UIB01_RS04895 PF00106 short chain dehydrogenase UIB01_RS04900 PF01740 STAS domain UIB01_RS04900 PF00916 Sulfate permease family UIB01_RS04910 PF06039 Malate:quinone oxidoreductase (Mqo) UIB01_RS04925 PF07044 Protein of unknown function (DUF1329) UIB01_RS04955 PF00672 HAMP domain UIB01_RS04955 PF02743 Cache domain UIB01_RS04955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS04960 PF01435 Peptidase family M48 UIB01_RS04970 PF01169 Uncharacterized protein family UPF0016 UIB01_RS04975 PF05175 Methyltransferase small domain UIB01_RS04975 PF08468 Methyltransferase small domain N-terminal UIB01_RS04980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UIB01_RS04980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UIB01_RS04985 PF01810 LysE type translocator UIB01_RS04990 PF00501 AMP-binding enzyme UIB01_RS04990 PF13193 AMP-binding enzyme C-terminal domain UIB01_RS04995 PF00753 Metallo-beta-lactamase superfamily UIB01_RS05000 PF13488 Glycine zipper UIB01_RS05000 PF00691 OmpA family UIB01_RS05005 PF01627 Hpt domain UIB01_RS05005 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS05005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS05005 PF00072 Response regulator receiver domain UIB01_RS05005 PF17149 Periplasmic sensor domain found in signal transduction proteins UIB01_RS05005 PF00672 HAMP domain UIB01_RS05010 PF00563 EAL domain UIB01_RS05010 PF03707 Bacterial signalling protein N terminal repeat UIB01_RS05010 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS05015 PF01553 Acyltransferase UIB01_RS05020 PF01515 Phosphate acetyl/butaryl transferase UIB01_RS05020 PF07085 DRTGG domain UIB01_RS05025 PF00871 Acetokinase family UIB01_RS05030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UIB01_RS05035 PF00255 Glutathione peroxidase UIB01_RS05040 PF16925 Tetracyclin repressor-like, C-terminal domain UIB01_RS05040 PF00440 Bacterial regulatory proteins, tetR family UIB01_RS05045 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UIB01_RS05045 PF07992 Pyridine nucleotide-disulphide oxidoreductase UIB01_RS05050 PF06071 Protein of unknown function (DUF933) UIB01_RS05050 PF01926 50S ribosome-binding GTPase UIB01_RS05055 PF01195 Peptidyl-tRNA hydrolase UIB01_RS05060 PF01386 Ribosomal L25p family UIB01_RS05060 PF14693 Ribosomal protein TL5, C-terminal domain UIB01_RS05065 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase UIB01_RS05065 PF14572 Phosphoribosyl synthetase-associated domain UIB01_RS05080 PF08544 GHMP kinases C terminal UIB01_RS05080 PF00288 GHMP kinases N terminal domain UIB01_RS05085 PF03550 Outer membrane lipoprotein LolB UIB01_RS05095 PF01488 Shikimate / quinate 5-dehydrogenase UIB01_RS05095 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain UIB01_RS05095 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain UIB01_RS05100 PF03462 PCRF domain UIB01_RS05100 PF00472 RF-1 domain UIB01_RS05105 PF05175 Methyltransferase small domain UIB01_RS05105 PF17827 PrmC N-terminal domain UIB01_RS05110 PF00899 ThiF family UIB01_RS05115 PF01177 Asp/Glu/Hydantoin racemase UIB01_RS05120 PF09411 Lipid A 3-O-deacylase (PagL) UIB01_RS05130 PF00860 Permease family UIB01_RS05140 PF00156 Phosphoribosyl transferase domain UIB01_RS05150 PF07044 Protein of unknown function (DUF1329) UIB01_RS05155 PF00196 Bacterial regulatory proteins, luxR family UIB01_RS05180 PF07517 SecA DEAD-like domain UIB01_RS05180 PF01043 SecA preprotein cross-linking domain UIB01_RS05180 PF02810 SEC-C motif UIB01_RS05180 PF07516 SecA Wing and Scaffold domain UIB01_RS05185 PF01960 ArgJ family UIB01_RS05195 PF00293 NUDIX domain UIB01_RS05200 PF00578 AhpC/TSA family UIB01_RS05200 PF10417 C-terminal domain of 1-Cys peroxiredoxin UIB01_RS05205 PF13192 Thioredoxin domain UIB01_RS05205 PF07992 Pyridine nucleotide-disulphide oxidoreductase UIB01_RS05225 PF01923 Cobalamin adenosyltransferase UIB01_RS05230 PF08447 PAS fold UIB01_RS05230 PF08448 PAS fold UIB01_RS05230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS05235 PF02558 Ketopantoate reductase PanE/ApbA UIB01_RS05235 PF08546 Ketopantoate reductase PanE/ApbA C terminal UIB01_RS05240 PF00486 Transcriptional regulatory protein, C terminal UIB01_RS05240 PF00072 Response regulator receiver domain UIB01_RS05245 PF04461 Protein of unknown function (DUF520) UIB01_RS05250 PF05552 Conserved TM helix UIB01_RS05250 PF00924 Mechanosensitive ion channel UIB01_RS05255 PF07690 Major Facilitator Superfamily UIB01_RS05280 PF04186 FxsA cytoplasmic membrane protein UIB01_RS05285 PF00166 Chaperonin 10 Kd subunit UIB01_RS05290 PF00118 TCP-1/cpn60 chaperonin family UIB01_RS05300 PF00873 AcrB/AcrD/AcrF family UIB01_RS05305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UIB01_RS05310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS05310 PF00672 HAMP domain UIB01_RS05335 PF04011 LemA family UIB01_RS05350 PF03707 Bacterial signalling protein N terminal repeat UIB01_RS05350 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS05350 PF00563 EAL domain UIB01_RS05355 PF02777 Iron/manganese superoxide dismutases, C-terminal domain UIB01_RS05355 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain UIB01_RS05360 PF01810 LysE type translocator UIB01_RS05365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS05365 PF03466 LysR substrate binding domain UIB01_RS05380 PF00657 GDSL-like Lipase/Acylhydrolase UIB01_RS05380 PF03797 Autotransporter beta-domain UIB01_RS05385 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS05390 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain UIB01_RS05390 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family UIB01_RS05405 PF00970 Oxidoreductase FAD-binding domain UIB01_RS05405 PF00042 Globin UIB01_RS05405 PF00175 Oxidoreductase NAD-binding domain UIB01_RS05415 PF00224 Pyruvate kinase, barrel domain UIB01_RS05415 PF02887 Pyruvate kinase, alpha/beta domain UIB01_RS05420 PF05161 MOFRL family UIB01_RS05420 PF13660 Domain of unknown function (DUF4147) UIB01_RS05425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UIB01_RS05425 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase UIB01_RS05430 PF01261 Xylose isomerase-like TIM barrel UIB01_RS05435 PF00205 Thiamine pyrophosphate enzyme, central domain UIB01_RS05435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UIB01_RS05435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UIB01_RS05440 PF03466 LysR substrate binding domain UIB01_RS05440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS05445 PF00576 HIUase/Transthyretin family UIB01_RS05455 PF00072 Response regulator receiver domain UIB01_RS05455 PF00486 Transcriptional regulatory protein, C terminal UIB01_RS05460 PF00672 HAMP domain UIB01_RS05460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS05460 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS05475 PF08360 QacR-like protein, C-terminal region UIB01_RS05475 PF00440 Bacterial regulatory proteins, tetR family UIB01_RS05485 PF00860 Permease family UIB01_RS05490 PF02254 TrkA-N domain UIB01_RS05490 PF00999 Sodium/hydrogen exchanger family UIB01_RS05500 PF04115 Ureidoglycolate lyase UIB01_RS05505 PF03561 Allantoicase repeat UIB01_RS05510 PF09349 OHCU decarboxylase UIB01_RS05510 PF01014 Uricase UIB01_RS05520 PF00576 HIUase/Transthyretin family UIB01_RS05530 PF00860 Permease family UIB01_RS05535 PF00392 Bacterial regulatory proteins, gntR family UIB01_RS05535 PF07729 FCD domain UIB01_RS05540 PF01979 Amidohydrolase family UIB01_RS05550 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain UIB01_RS05550 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase UIB01_RS05555 PF00111 2Fe-2S iron-sulfur cluster binding domain UIB01_RS05555 PF01799 [2Fe-2S] binding domain UIB01_RS05560 PF03171 2OG-Fe(II) oxygenase superfamily UIB01_RS05560 PF14226 non-haem dioxygenase in morphine synthesis N-terminal UIB01_RS05565 PF02608 ABC transporter substrate-binding protein PnrA-like UIB01_RS05570 PF01979 Amidohydrolase family UIB01_RS05580 PF00689 Cation transporting ATPase, C-terminus UIB01_RS05580 PF00690 Cation transporter/ATPase, N-terminus UIB01_RS05585 PF01464 Transglycosylase SLT domain UIB01_RS05585 PF00497 Bacterial extracellular solute-binding proteins, family 3 UIB01_RS05590 PF01541 GIY-YIG catalytic domain UIB01_RS05605 PF03976 Polyphosphate kinase 2 (PPK2) UIB01_RS05610 PF04245 37-kD nucleoid-associated bacterial protein UIB01_RS05620 PF07690 Major Facilitator Superfamily UIB01_RS05630 PF05971 RNA methyltransferase UIB01_RS05635 PF06779 Uncharacterised MFS-type transporter YbfB UIB01_RS05640 PF03600 Citrate transporter UIB01_RS05640 PF02080 TrkA-C domain UIB01_RS05650 PF03600 Citrate transporter UIB01_RS05655 PF08264 Anticodon-binding domain of tRNA UIB01_RS05655 PF00133 tRNA synthetases class I (I, L, M and V) UIB01_RS05655 PF10458 Valyl tRNA synthetase tRNA binding arm UIB01_RS05665 PF04364 DNA polymerase III chi subunit, HolC UIB01_RS05670 PF00883 Cytosol aminopeptidase family, catalytic domain UIB01_RS05670 PF02789 Cytosol aminopeptidase family, N-terminal domain UIB01_RS05675 PF03739 Lipopolysaccharide export system permease LptF/LptG UIB01_RS05680 PF03739 Lipopolysaccharide export system permease LptF/LptG UIB01_RS05690 PF00313 'Cold-shock' DNA-binding domain UIB01_RS05700 PF02547 Queuosine biosynthesis protein UIB01_RS05705 PF01702 Queuine tRNA-ribosyltransferase UIB01_RS05710 PF02699 Preprotein translocase subunit UIB01_RS05715 PF07549 SecD/SecF GG Motif UIB01_RS05715 PF13721 SecD export protein N-terminal TM region UIB01_RS05715 PF02355 Protein export membrane protein UIB01_RS05720 PF07549 SecD/SecF GG Motif UIB01_RS05720 PF02355 Protein export membrane protein UIB01_RS05725 PF05433 Glycine zipper 2TM domain UIB01_RS05730 PF00459 Inositol monophosphatase family UIB01_RS05735 PF00588 SpoU rRNA Methylase family UIB01_RS05740 PF00132 Bacterial transferase hexapeptide (six repeats) UIB01_RS05745 PF02082 Transcriptional regulator UIB01_RS05750 PF00266 Aminotransferase class-V UIB01_RS05755 PF01592 NifU-like N terminal domain UIB01_RS05760 PF01521 Iron-sulphur cluster biosynthesis UIB01_RS05765 PF00226 DnaJ domain UIB01_RS05765 PF07743 HSCB C-terminal oligomerisation domain UIB01_RS05770 PF00012 Hsp70 protein UIB01_RS05775 PF00111 2Fe-2S iron-sulfur cluster binding domain UIB01_RS05780 PF04384 Iron-sulphur cluster assembly UIB01_RS05785 PF00334 Nucleoside diphosphate kinase UIB01_RS05790 PF04055 Radical SAM superfamily UIB01_RS05805 PF04551 GcpE protein UIB01_RS05810 PF13393 Histidyl-tRNA synthetase UIB01_RS05810 PF03129 Anticodon binding domain UIB01_RS05815 PF09976 Tetratricopeptide repeat-like domain UIB01_RS05820 PF13360 PQQ-like domain UIB01_RS05825 PF01926 50S ribosome-binding GTPase UIB01_RS05825 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal UIB01_RS05830 PF00132 Bacterial transferase hexapeptide (six repeats) UIB01_RS05830 PF06426 Serine acetyltransferase, N-terminal UIB01_RS05835 PF00155 Aminotransferase class I and II UIB01_RS05840 PF00795 Carbon-nitrogen hydrolase UIB01_RS05860 PF09997 Predicted membrane protein (DUF2238) UIB01_RS05865 PF04231 Endonuclease I UIB01_RS05870 PF00892 EamA-like transporter family UIB01_RS05875 PF00107 Zinc-binding dehydrogenase UIB01_RS05875 PF08240 Alcohol dehydrogenase GroES-like domain UIB01_RS05880 PF08502 LeuA allosteric (dimerisation) domain UIB01_RS05880 PF00682 HMGL-like UIB01_RS05895 PF00924 Mechanosensitive ion channel UIB01_RS05905 PF08525 Opacity-associated protein A N-terminal motif UIB01_RS05905 PF01551 Peptidase family M23 UIB01_RS05905 PF01476 LysM domain UIB01_RS05910 PF02601 Exonuclease VII, large subunit UIB01_RS05910 PF13742 OB-fold nucleic acid binding domain UIB01_RS05920 PF00571 CBS domain UIB01_RS05920 PF00478 IMP dehydrogenase / GMP reductase domain UIB01_RS05925 PF02540 NAD synthase UIB01_RS05925 PF00958 GMP synthase C terminal domain UIB01_RS05925 PF00117 Glutamine amidotransferase class-I UIB01_RS05930 PF00394 Multicopper oxidase UIB01_RS05930 PF07732 Multicopper oxidase UIB01_RS05930 PF07731 Multicopper oxidase UIB01_RS05935 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UIB01_RS05940 PF08402 TOBE domain UIB01_RS05940 PF00005 ABC transporter UIB01_RS05945 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain UIB01_RS05945 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain UIB01_RS05950 PF00462 Glutaredoxin UIB01_RS05965 PF00155 Aminotransferase class I and II UIB01_RS05970 PF17757 UvrB interaction domain UIB01_RS05970 PF00271 Helicase conserved C-terminal domain UIB01_RS05970 PF04851 Type III restriction enzyme, res subunit UIB01_RS05970 PF02151 UvrB/uvrC motif UIB01_RS05970 PF12344 Ultra-violet resistance protein B UIB01_RS05975 PF00749 tRNA synthetases class I (E and Q), catalytic domain UIB01_RS06010 PF00817 impB/mucB/samB family UIB01_RS06010 PF11798 IMS family HHH motif UIB01_RS06030 PF00005 ABC transporter UIB01_RS06035 PF00005 ABC transporter UIB01_RS06035 PF12399 Branched-chain amino acid ATP-binding cassette transporter UIB01_RS06040 PF02653 Branched-chain amino acid transport system / permease component UIB01_RS06040 PF11862 Domain of unknown function (DUF3382) UIB01_RS06045 PF02653 Branched-chain amino acid transport system / permease component UIB01_RS06050 PF13458 Periplasmic binding protein UIB01_RS06060 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS06065 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS06070 PF00005 ABC transporter UIB01_RS06085 PF02673 Bacitracin resistance protein BacA UIB01_RS06090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UIB01_RS06090 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase UIB01_RS06095 PF01261 Xylose isomerase-like TIM barrel UIB01_RS06100 PF07690 Major Facilitator Superfamily UIB01_RS06105 PF00012 Hsp70 protein UIB01_RS06115 PF18337 RapA N-terminal Tudor like domain UIB01_RS06115 PF18339 RapA N-terminal Tudor like domain 1 UIB01_RS06115 PF00176 SNF2 family N-terminal domain UIB01_RS06115 PF12137 RNA polymerase recycling family C-terminal UIB01_RS06115 PF00271 Helicase conserved C-terminal domain UIB01_RS06135 PF01575 MaoC like domain UIB01_RS06140 PF13193 AMP-binding enzyme C-terminal domain UIB01_RS06140 PF00501 AMP-binding enzyme UIB01_RS06145 PF13193 AMP-binding enzyme C-terminal domain UIB01_RS06145 PF00501 AMP-binding enzyme UIB01_RS06150 PF00672 HAMP domain UIB01_RS06150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS06150 PF17200 Single Cache domain 2 UIB01_RS06155 PF00672 HAMP domain UIB01_RS06155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS06155 PF17200 Single Cache domain 2 UIB01_RS06160 PF02225 PA domain UIB01_RS06160 PF04389 Peptidase family M28 UIB01_RS06165 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold UIB01_RS06165 PF00271 Helicase conserved C-terminal domain UIB01_RS06165 PF11898 Domain of unknown function (DUF3418) UIB01_RS06165 PF00270 DEAD/DEAH box helicase UIB01_RS06165 PF04408 Helicase associated domain (HA2) UIB01_RS06175 PF16697 Inner membrane component of T3SS, cytoplasmic domain UIB01_RS06180 PF03793 PASTA domain UIB01_RS06180 PF00069 Protein kinase domain UIB01_RS06190 PF00588 SpoU rRNA Methylase family UIB01_RS06190 PF08032 RNA 2'-O ribose methyltransferase substrate binding UIB01_RS06200 PF01728 FtsJ-like methyltransferase UIB01_RS06210 PF12697 Alpha/beta hydrolase family UIB01_RS06215 PF01738 Dienelactone hydrolase family UIB01_RS06220 PF12706 Beta-lactamase superfamily domain UIB01_RS06240 PF03795 YCII-related domain UIB01_RS06255 PF03475 3-alpha domain UIB01_RS06255 PF03473 MOSC domain UIB01_RS06260 PF07687 Peptidase dimerisation domain UIB01_RS06260 PF01546 Peptidase family M20/M25/M40 UIB01_RS06265 PF01230 HIT domain UIB01_RS06280 PF00005 ABC transporter UIB01_RS06285 PF04286 Protein of unknown function (DUF445) UIB01_RS06305 PF01810 LysE type translocator UIB01_RS06310 PF12833 Helix-turn-helix domain UIB01_RS06325 PF12729 Four helix bundle sensory module for signal transduction UIB01_RS06325 PF00672 HAMP domain UIB01_RS06325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS06330 PF00364 Biotin-requiring enzyme UIB01_RS06330 PF00561 alpha/beta hydrolase fold UIB01_RS06335 PF02129 X-Pro dipeptidyl-peptidase (S15 family) UIB01_RS06340 PF07690 Major Facilitator Superfamily UIB01_RS06345 PF00672 HAMP domain UIB01_RS06345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS06350 PF03600 Citrate transporter UIB01_RS06350 PF02080 TrkA-C domain UIB01_RS06365 PF01131 DNA topoisomerase UIB01_RS06365 PF01751 Toprim domain UIB01_RS06375 PF00375 Sodium:dicarboxylate symporter family UIB01_RS06390 PF02661 Fic/DOC family UIB01_RS06395 PF02653 Branched-chain amino acid transport system / permease component UIB01_RS06400 PF02653 Branched-chain amino acid transport system / permease component UIB01_RS06405 PF00005 ABC transporter UIB01_RS06410 PF06719 AraC-type transcriptional regulator N-terminus UIB01_RS06410 PF12833 Helix-turn-helix domain UIB01_RS06420 PF00106 short chain dehydrogenase UIB01_RS06430 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS06435 PF00005 ABC transporter UIB01_RS06440 PF09084 NMT1/THI5 like UIB01_RS06460 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS06460 PF08448 PAS fold UIB01_RS06460 PF13188 PAS domain UIB01_RS06460 PF00072 Response regulator receiver domain UIB01_RS06460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS06465 PF06745 KaiC UIB01_RS06500 PF03466 LysR substrate binding domain UIB01_RS06500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS06520 PF00550 Phosphopantetheine attachment site UIB01_RS06520 PF02801 Beta-ketoacyl synthase, C-terminal domain UIB01_RS06520 PF00109 Beta-ketoacyl synthase, N-terminal domain UIB01_RS06520 PF08240 Alcohol dehydrogenase GroES-like domain UIB01_RS06520 PF00698 Acyl transferase domain UIB01_RS06520 PF14765 Polyketide synthase dehydratase UIB01_RS06520 PF08659 KR domain UIB01_RS06520 PF16197 Ketoacyl-synthetase C-terminal extension UIB01_RS06530 PF08443 RimK-like ATP-grasp domain UIB01_RS06530 PF18030 RimK PreATP-grasp domain UIB01_RS06535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS06535 PF03466 LysR substrate binding domain UIB01_RS06540 PF00440 Bacterial regulatory proteins, tetR family UIB01_RS06540 PF08362 YcdC-like protein, C-terminal region UIB01_RS06560 PF03783 Curli production assembly/transport component CsgG UIB01_RS06580 PF01810 LysE type translocator UIB01_RS06590 PF00106 short chain dehydrogenase UIB01_RS06595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS06595 PF03466 LysR substrate binding domain UIB01_RS06605 PF01717 Cobalamin-independent synthase, Catalytic domain UIB01_RS06605 PF08267 Cobalamin-independent synthase, N-terminal domain UIB01_RS06610 PF16901 C-terminal domain of alpha-glycerophosphate oxidase UIB01_RS06610 PF01266 FAD dependent oxidoreductase UIB01_RS06615 PF04073 Aminoacyl-tRNA editing domain UIB01_RS06620 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS06620 PF05230 MASE2 domain UIB01_RS06630 PF00023 Ankyrin repeat UIB01_RS06630 PF12796 Ankyrin repeats (3 copies) UIB01_RS06635 PF12843 Putative quorum-sensing-regulated virulence factor UIB01_RS06645 PF00034 Cytochrome c UIB01_RS06650 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UIB01_RS06655 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal UIB01_RS06655 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III UIB01_RS06660 PF02657 Fe-S metabolism associated domain UIB01_RS06665 PF00266 Aminotransferase class-V UIB01_RS06670 PF14602 Hexapeptide repeat of succinyl-transferase UIB01_RS06670 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle UIB01_RS06675 PF03960 ArsC family UIB01_RS06690 PF00155 Aminotransferase class I and II UIB01_RS06705 PF00551 Formyl transferase UIB01_RS06710 PF02769 AIR synthase related protein, C-terminal domain UIB01_RS06710 PF00586 AIR synthase related protein, N-terminal domain UIB01_RS06720 PF01594 AI-2E family transporter UIB01_RS06725 PF00308 Bacterial dnaA protein UIB01_RS06735 PF03358 NADPH-dependent FMN reductase UIB01_RS06740 PF03960 ArsC family UIB01_RS06745 PF03631 Virulence factor BrkB UIB01_RS06760 PF02683 Cytochrome C biogenesis protein transmembrane region UIB01_RS06760 PF11412 Disulphide bond corrector protein DsbC UIB01_RS06775 PF04073 Aminoacyl-tRNA editing domain UIB01_RS06775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UIB01_RS06775 PF03129 Anticodon binding domain UIB01_RS06780 PF03573 outer membrane porin, OprD family UIB01_RS06790 PF04102 SlyX UIB01_RS06800 PF00210 Ferritin-like domain UIB01_RS06805 PF01336 OB-fold nucleic acid binding domain UIB01_RS06805 PF02938 GAD domain UIB01_RS06805 PF00152 tRNA synthetases class II (D, K and N) UIB01_RS06810 PF01709 Transcriptional regulator UIB01_RS06815 PF02075 Crossover junction endodeoxyribonuclease RuvC UIB01_RS06820 PF01330 RuvA N terminal domain UIB01_RS06820 PF07499 RuvA, C-terminal domain UIB01_RS06825 PF17864 RuvB AAA lid domain UIB01_RS06825 PF05491 RuvB C-terminal winged helix domain UIB01_RS06825 PF05496 Holliday junction DNA helicase RuvB P-loop domain UIB01_RS06830 PF03061 Thioesterase superfamily UIB01_RS06835 PF01618 MotA/TolQ/ExbB proton channel family UIB01_RS06840 PF02472 Biopolymer transport protein ExbD/TolR UIB01_RS06850 PF04052 TolB amino-terminal domain UIB01_RS06850 PF07676 WD40-like Beta Propeller Repeat UIB01_RS06855 PF00691 OmpA family UIB01_RS06860 PF13525 Outer membrane lipoprotein UIB01_RS06860 PF16331 TolA binding protein trimerisation UIB01_RS06865 PF04055 Radical SAM superfamily UIB01_RS06870 PF06508 Queuosine biosynthesis protein QueC UIB01_RS06880 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain UIB01_RS06880 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain UIB01_RS06885 PF02445 Quinolinate synthetase A protein UIB01_RS06890 PF01435 Peptidase family M48 UIB01_RS06895 PF01206 Sulfurtransferase TusA UIB01_RS06900 PF01594 AI-2E family transporter UIB01_RS06905 PF00578 AhpC/TSA family UIB01_RS06910 PF01842 ACT domain UIB01_RS06915 PF00701 Dihydrodipicolinate synthetase family UIB01_RS06925 PF01259 SAICAR synthetase UIB01_RS06950 PF00239 Resolvase, N terminal domain UIB01_RS06950 PF02796 Helix-turn-helix domain of resolvase UIB01_RS06995 PF03104 DNA polymerase family B, exonuclease domain UIB01_RS06995 PF00136 DNA polymerase family B UIB01_RS07010 PF13617 YnbE-like lipoprotein UIB01_RS07025 PF02646 RmuC family UIB01_RS07030 PF13194 Domain of unknown function (DUF4010) UIB01_RS07035 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS07035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS07045 PF03591 AzlC protein UIB01_RS07055 PF07690 Major Facilitator Superfamily UIB01_RS07060 PF04381 Putative exonuclease, RdgC UIB01_RS07075 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase UIB01_RS07075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UIB01_RS07080 PF00210 Ferritin-like domain UIB01_RS07085 PF04324 BFD-like [2Fe-2S] binding domain UIB01_RS07090 PF07152 YaeQ protein UIB01_RS07095 PF01566 Natural resistance-associated macrophage protein UIB01_RS07100 PF02626 Carboxyltransferase domain, subdomain A and B UIB01_RS07105 PF02682 Carboxyltransferase domain, subdomain C and D UIB01_RS07110 PF03746 LamB/YcsF family UIB01_RS07120 PF02272 DHHA1 domain UIB01_RS07120 PF17768 RecJ OB domain UIB01_RS07120 PF01368 DHH family UIB01_RS07125 PF01568 Molydopterin dinucleotide binding domain UIB01_RS07125 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UIB01_RS07125 PF00384 Molybdopterin oxidoreductase UIB01_RS07130 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UIB01_RS07150 PF00152 tRNA synthetases class II (D, K and N) UIB01_RS07150 PF01336 OB-fold nucleic acid binding domain UIB01_RS07175 PF01389 OmpA-like transmembrane domain UIB01_RS07175 PF00691 OmpA family UIB01_RS07190 PF00311 Phosphoenolpyruvate carboxylase UIB01_RS07195 PF05191 Adenylate kinase, active site lid UIB01_RS07200 PF00814 Glycoprotease family UIB01_RS07220 PF04445 Putative SAM-dependent methyltransferase UIB01_RS07225 PF00440 Bacterial regulatory proteins, tetR family UIB01_RS07225 PF08361 MAATS-type transcriptional repressor, C-terminal region UIB01_RS07230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UIB01_RS07235 PF00873 AcrB/AcrD/AcrF family UIB01_RS07240 PF00440 Bacterial regulatory proteins, tetR family UIB01_RS07255 PF03707 Bacterial signalling protein N terminal repeat UIB01_RS07255 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS07255 PF00563 EAL domain UIB01_RS07260 PF00392 Bacterial regulatory proteins, gntR family UIB01_RS07260 PF00155 Aminotransferase class I and II UIB01_RS07265 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase UIB01_RS07265 PF12801 4Fe-4S binding domain UIB01_RS07265 PF13746 4Fe-4S dicluster domain UIB01_RS07270 PF03788 LrgA family UIB01_RS07275 PF04172 LrgB-like family UIB01_RS07280 PF02567 Phenazine biosynthesis-like protein UIB01_RS07285 PF00933 Glycosyl hydrolase family 3 N terminal domain UIB01_RS07285 PF14310 Fibronectin type III-like domain UIB01_RS07285 PF01915 Glycosyl hydrolase family 3 C-terminal domain UIB01_RS07290 PF04349 Periplasmic glucan biosynthesis protein, MdoG UIB01_RS07295 PF00535 Glycosyl transferase family 2 UIB01_RS07300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UIB01_RS07305 PF17954 Quercetinase C-terminal cupin domain UIB01_RS07305 PF02678 Pirin UIB01_RS07310 PF03358 NADPH-dependent FMN reductase UIB01_RS07325 PF05275 Copper resistance protein B precursor (CopB) UIB01_RS07335 PF07732 Multicopper oxidase UIB01_RS07335 PF00394 Multicopper oxidase UIB01_RS07335 PF07731 Multicopper oxidase UIB01_RS07345 PF00403 Heavy-metal-associated domain UIB01_RS07350 PF00072 Response regulator receiver domain UIB01_RS07350 PF00486 Transcriptional regulatory protein, C terminal UIB01_RS07355 PF00672 HAMP domain UIB01_RS07355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS07355 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS07360 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS07360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS07360 PF08521 Two-component sensor kinase N-terminal UIB01_RS07365 PF00486 Transcriptional regulatory protein, C terminal UIB01_RS07365 PF00072 Response regulator receiver domain UIB01_RS07370 PF11412 Disulphide bond corrector protein DsbC UIB01_RS07370 PF02683 Cytochrome C biogenesis protein transmembrane region UIB01_RS07375 PF00578 AhpC/TSA family UIB01_RS07380 PF13098 Thioredoxin-like domain UIB01_RS07395 PF01553 Acyltransferase UIB01_RS07400 PF00141 Peroxidase UIB01_RS07415 PF00905 Penicillin binding protein transpeptidase domain UIB01_RS07420 PF13302 Acetyltransferase (GNAT) domain UIB01_RS07430 PF00005 ABC transporter UIB01_RS07445 PF00313 'Cold-shock' DNA-binding domain UIB01_RS07455 PF13847 Methyltransferase domain UIB01_RS07460 PF07687 Peptidase dimerisation domain UIB01_RS07460 PF01546 Peptidase family M20/M25/M40 UIB01_RS07465 PF00899 ThiF family UIB01_RS07470 PF07396 Phosphate-selective porin O and P UIB01_RS07485 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD UIB01_RS07505 PF00271 Helicase conserved C-terminal domain UIB01_RS07505 PF00270 DEAD/DEAH box helicase UIB01_RS07520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS07520 PF03466 LysR substrate binding domain UIB01_RS07530 PF01925 Sulfite exporter TauE/SafE UIB01_RS07540 PF05430 S-adenosyl-L-methionine-dependent methyltransferase UIB01_RS07540 PF01266 FAD dependent oxidoreductase UIB01_RS07545 PF01627 Hpt domain UIB01_RS07545 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS07545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS07545 PF00672 HAMP domain UIB01_RS07545 PF00072 Response regulator receiver domain UIB01_RS07545 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) UIB01_RS07550 PF03458 UPF0126 domain UIB01_RS07555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS07555 PF03466 LysR substrate binding domain UIB01_RS07560 PF00291 Pyridoxal-phosphate dependent enzyme UIB01_RS07565 PF05958 tRNA (Uracil-5-)-methyltransferase UIB01_RS07565 PF01938 TRAM domain UIB01_RS07570 PF02824 TGS domain UIB01_RS07570 PF04607 Region found in RelA / SpoT proteins UIB01_RS07570 PF13291 ACT domain UIB01_RS07575 PF03819 MazG nucleotide pyrophosphohydrolase domain UIB01_RS07585 PF00156 Phosphoribosyl transferase domain UIB01_RS07585 PF05139 Erythromycin esterase UIB01_RS07600 PF00271 Helicase conserved C-terminal domain UIB01_RS07600 PF00270 DEAD/DEAH box helicase UIB01_RS07600 PF08494 DEAD/H associated UIB01_RS07605 PF04675 DNA ligase N terminus UIB01_RS07605 PF04679 ATP dependent DNA ligase C terminal region UIB01_RS07605 PF01068 ATP dependent DNA ligase domain UIB01_RS07620 PF00176 SNF2 family N-terminal domain UIB01_RS07620 PF00271 Helicase conserved C-terminal domain UIB01_RS07620 PF12419 SNF2 Helicase protein UIB01_RS07630 PF02559 CarD-like/TRCF domain UIB01_RS07630 PF00270 DEAD/DEAH box helicase UIB01_RS07630 PF00271 Helicase conserved C-terminal domain UIB01_RS07630 PF03461 TRCF domain UIB01_RS07630 PF17757 UvrB interaction domain UIB01_RS07635 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain UIB01_RS07635 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain UIB01_RS07640 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) UIB01_RS07640 PF11973 NQRA C-terminal domain UIB01_RS07645 PF03116 NQR2, RnfD, RnfE family UIB01_RS07650 PF04205 FMN-binding domain UIB01_RS07655 PF02508 Rnf-Nqr subunit, membrane protein UIB01_RS07660 PF02508 Rnf-Nqr subunit, membrane protein UIB01_RS07665 PF00970 Oxidoreductase FAD-binding domain UIB01_RS07665 PF00111 2Fe-2S iron-sulfur cluster binding domain UIB01_RS07665 PF00175 Oxidoreductase NAD-binding domain UIB01_RS07670 PF02424 ApbE family UIB01_RS07680 PF07992 Pyridine nucleotide-disulphide oxidoreductase UIB01_RS07680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UIB01_RS07685 PF03009 Glycerophosphoryl diester phosphodiesterase family UIB01_RS07700 PF02687 FtsX-like permease family UIB01_RS07700 PF12704 MacB-like periplasmic core domain UIB01_RS07705 PF00005 ABC transporter UIB01_RS07710 PF12704 MacB-like periplasmic core domain UIB01_RS07710 PF02687 FtsX-like permease family UIB01_RS07720 PF03772 Competence protein UIB01_RS07720 PF00753 Metallo-beta-lactamase superfamily UIB01_RS07720 PF13567 Domain of unknown function (DUF4131) UIB01_RS07725 PF01618 MotA/TolQ/ExbB proton channel family UIB01_RS07735 PF02606 Tetraacyldisaccharide-1-P 4'-kinase UIB01_RS07740 PF03966 Trm112p-like protein UIB01_RS07745 PF02348 Cytidylyltransferase UIB01_RS07750 PF01451 Low molecular weight phosphotyrosine protein phosphatase UIB01_RS07755 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain UIB01_RS07755 PF01565 FAD binding domain UIB01_RS07760 PF12111 Polyribonucleotide phosphorylase C terminal UIB01_RS07760 PF00575 S1 RNA binding domain UIB01_RS07760 PF10150 Ribonuclease E/G family UIB01_RS07765 PF00849 RNA pseudouridylate synthase UIB01_RS07765 PF01479 S4 domain UIB01_RS07770 PF13419 Haloacid dehalogenase-like hydrolase UIB01_RS07775 PF01343 Peptidase family S49 UIB01_RS07775 PF06965 Na+/H+ antiporter 1 UIB01_RS07780 PF02545 Maf-like protein UIB01_RS07785 PF02620 Large ribosomal RNA subunit accumulation protein YceD UIB01_RS07790 PF01783 Ribosomal L32p protein family UIB01_RS07795 PF02504 Fatty acid synthesis protein UIB01_RS07800 PF00698 Acyl transferase domain UIB01_RS07810 PF00550 Phosphopantetheine attachment site UIB01_RS07815 PF02801 Beta-ketoacyl synthase, C-terminal domain UIB01_RS07815 PF00109 Beta-ketoacyl synthase, N-terminal domain UIB01_RS07820 PF01063 Amino-transferase class IV UIB01_RS07825 PF02618 YceG-like family UIB01_RS07830 PF02223 Thymidylate kinase UIB01_RS07835 PF09115 DNA polymerase III, delta subunit, C terminal UIB01_RS07845 PF01026 TatD related DNase UIB01_RS07850 PF00324 Amino acid permease UIB01_RS07855 PF00266 Aminotransferase class-V UIB01_RS07860 PF00440 Bacterial regulatory proteins, tetR family UIB01_RS07885 PF01012 Electron transfer flavoprotein domain UIB01_RS07890 PF00766 Electron transfer flavoprotein FAD-binding domain UIB01_RS07890 PF01012 Electron transfer flavoprotein domain UIB01_RS07905 PF05736 OprF membrane domain UIB01_RS07905 PF00691 OmpA family UIB01_RS07910 PF00155 Aminotransferase class I and II UIB01_RS07910 PF00392 Bacterial regulatory proteins, gntR family UIB01_RS07920 PF03707 Bacterial signalling protein N terminal repeat UIB01_RS07920 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS07920 PF00563 EAL domain UIB01_RS07920 PF13188 PAS domain UIB01_RS07925 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family UIB01_RS07930 PF00107 Zinc-binding dehydrogenase UIB01_RS07930 PF16884 N-terminal domain of oxidoreductase UIB01_RS07940 PF03594 Benzoate membrane transport protein UIB01_RS07945 PF02049 Flagellar hook-basal body complex protein FliE UIB01_RS07950 PF01514 Secretory protein of YscJ/FliF family UIB01_RS07950 PF08345 Flagellar M-ring protein C-terminal UIB01_RS07955 PF14841 FliG middle domain UIB01_RS07955 PF14842 FliG N-terminal domain UIB01_RS07955 PF01706 FliG C-terminal domain UIB01_RS07965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UIB01_RS07965 PF18269 T3SS EscN ATPase C-terminal domain UIB01_RS07975 PF13466 STAS domain UIB01_RS07980 PF00072 Response regulator receiver domain UIB01_RS07980 PF00486 Transcriptional regulatory protein, C terminal UIB01_RS08000 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term UIB01_RS08000 PF02154 Flagellar motor switch protein FliM UIB01_RS08005 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term UIB01_RS08010 PF04347 Flagellar biosynthesis protein, FliO UIB01_RS08015 PF00813 FliP family UIB01_RS08020 PF01313 Bacterial export proteins, family 3 UIB01_RS08025 PF01311 Bacterial export proteins, family 1 UIB01_RS08030 PF01312 FlhB HrpN YscU SpaS Family UIB01_RS08035 PF00080 Copper/zinc superoxide dismutase (SODC) UIB01_RS08040 PF00771 FHIPEP family UIB01_RS08045 PF00448 SRP54-type protein, GTPase domain UIB01_RS08050 PF10609 NUBPL iron-transfer P-loop NTPase UIB01_RS08055 PF04545 Sigma-70, region 4 UIB01_RS08055 PF04539 Sigma-70 region 3 UIB01_RS08055 PF04542 Sigma-70 region 2 UIB01_RS08060 PF00072 Response regulator receiver domain UIB01_RS08065 PF04344 Chemotaxis phosphatase, CheZ UIB01_RS08070 PF01584 CheW-like domain UIB01_RS08070 PF02895 Signal transducing histidine kinase, homodimeric domain UIB01_RS08070 PF01627 Hpt domain UIB01_RS08070 PF00072 Response regulator receiver domain UIB01_RS08070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS08075 PF01339 CheB methylesterase UIB01_RS08075 PF00072 Response regulator receiver domain UIB01_RS08080 PF01618 MotA/TolQ/ExbB proton channel family UIB01_RS08085 PF13677 Membrane MotB of proton-channel complex MotA/MotB UIB01_RS08085 PF00691 OmpA family UIB01_RS08090 PF13614 AAA domain UIB01_RS08100 PF01584 CheW-like domain UIB01_RS08115 PF01312 FlhB HrpN YscU SpaS Family UIB01_RS08125 PF00005 ABC transporter UIB01_RS08130 PF03379 CcmB protein UIB01_RS08135 PF01578 Cytochrome C assembly protein UIB01_RS08140 PF04995 Heme exporter protein D (CcmD) UIB01_RS08145 PF03100 CcmE UIB01_RS08150 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal UIB01_RS08150 PF01578 Cytochrome C assembly protein UIB01_RS08155 PF08534 Redoxin UIB01_RS08160 PF03918 Cytochrome C biogenesis protein UIB01_RS08175 PF00158 Sigma-54 interaction domain UIB01_RS08175 PF02954 Bacterial regulatory protein, Fis family UIB01_RS08175 PF06490 Flagellar regulatory protein FleQ UIB01_RS08180 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS08180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS08180 PF13188 PAS domain UIB01_RS08185 PF02954 Bacterial regulatory protein, Fis family UIB01_RS08185 PF00072 Response regulator receiver domain UIB01_RS08185 PF00158 Sigma-54 interaction domain UIB01_RS08190 PF05724 Thiopurine S-methyltransferase (TPMT) UIB01_RS08200 PF01435 Peptidase family M48 UIB01_RS08210 PF00155 Aminotransferase class I and II UIB01_RS08215 PF01641 SelR domain UIB01_RS08220 PF00255 Glutathione peroxidase UIB01_RS08230 PF00043 Glutathione S-transferase, C-terminal domain UIB01_RS08230 PF02798 Glutathione S-transferase, N-terminal domain UIB01_RS08260 PF04143 Sulphur transport UIB01_RS08275 PF00581 Rhodanese-like domain UIB01_RS08280 PF00916 Sulfate permease family UIB01_RS08280 PF01740 STAS domain UIB01_RS08290 PF00753 Metallo-beta-lactamase superfamily UIB01_RS08295 PF00005 ABC transporter UIB01_RS08300 PF02687 FtsX-like permease family UIB01_RS08300 PF12704 MacB-like periplasmic core domain UIB01_RS08305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UIB01_RS08310 PF02535 ZIP Zinc transporter UIB01_RS08315 PF00691 OmpA family UIB01_RS08315 PF13677 Membrane MotB of proton-channel complex MotA/MotB UIB01_RS08320 PF01618 MotA/TolQ/ExbB proton channel family UIB01_RS08325 PF01593 Flavin containing amine oxidoreductase UIB01_RS08360 PF02384 N-6 DNA Methylase UIB01_RS08370 PF18766 SWI2/SNF2 ATPase UIB01_RS08370 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) UIB01_RS08370 PF11867 Domain of unknown function (DUF3387) UIB01_RS08375 PF02796 Helix-turn-helix domain of resolvase UIB01_RS08375 PF00239 Resolvase, N terminal domain UIB01_RS08395 PF09285 Elongation factor P, C-terminal UIB01_RS08395 PF01132 Elongation factor P (EF-P) OB domain UIB01_RS08395 PF08207 Elongation factor P (EF-P) KOW-like domain UIB01_RS08400 PF00939 Sodium:sulfate symporter transmembrane region UIB01_RS08405 PF01474 Class-II DAHP synthetase family UIB01_RS08415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS08415 PF00672 HAMP domain UIB01_RS08415 PF12729 Four helix bundle sensory module for signal transduction UIB01_RS08420 PF03880 DbpA RNA binding domain UIB01_RS08420 PF00271 Helicase conserved C-terminal domain UIB01_RS08420 PF00270 DEAD/DEAH box helicase UIB01_RS08430 PF05717 IS66 Orf2 like protein UIB01_RS08435 PF03050 Transposase IS66 family UIB01_RS08435 PF13007 Transposase C of IS166 homeodomain UIB01_RS08435 PF13005 zinc-finger binding domain of transposase IS66 UIB01_RS08435 PF13817 IS66 C-terminal element UIB01_RS08440 PF07929 Plasmid pRiA4b ORF-3-like protein UIB01_RS08450 PF00216 Bacterial DNA-binding protein UIB01_RS08465 PF10996 Beta-Casp domain UIB01_RS08465 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain UIB01_RS08465 PF00753 Metallo-beta-lactamase superfamily UIB01_RS08470 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UIB01_RS08470 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UIB01_RS08470 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain UIB01_RS08475 PF01370 NAD dependent epimerase/dehydratase family UIB01_RS08490 PF03023 Lipid II flippase MurJ UIB01_RS08500 PF02719 Polysaccharide biosynthesis protein UIB01_RS08500 PF08485 Polysaccharide biosynthesis protein C-terminal UIB01_RS08505 PF02350 UDP-N-acetylglucosamine 2-epimerase UIB01_RS08510 PF13477 Glycosyl transferase 4-like UIB01_RS08510 PF00534 Glycosyl transferases group 1 UIB01_RS08515 PF02397 Bacterial sugar transferase UIB01_RS08525 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UIB01_RS08530 PF02719 Polysaccharide biosynthesis protein UIB01_RS08545 PF03976 Polyphosphate kinase 2 (PPK2) UIB01_RS08550 PF02803 Thiolase, C-terminal domain UIB01_RS08550 PF00108 Thiolase, N-terminal domain UIB01_RS08555 PF10531 SLBB domain UIB01_RS08555 PF18412 Outer-membrane lipoprotein Wza C-terminal domain UIB01_RS08555 PF02563 Polysaccharide biosynthesis/export protein UIB01_RS08560 PF03808 Glycosyl transferase WecB/TagA/CpsF family UIB01_RS08590 PF00150 Cellulase (glycosyl hydrolase family 5) UIB01_RS08595 PF02706 Chain length determinant protein UIB01_RS08595 PF13614 AAA domain UIB01_RS08595 PF13807 G-rich domain on putative tyrosine kinase UIB01_RS08600 PF01451 Low molecular weight phosphotyrosine protein phosphatase UIB01_RS08605 PF02397 Bacterial sugar transferase UIB01_RS08610 PF00781 Diacylglycerol kinase catalytic domain UIB01_RS08615 PF00072 Response regulator receiver domain UIB01_RS08620 PF00111 2Fe-2S iron-sulfur cluster binding domain UIB01_RS08620 PF03476 MOSC N-terminal beta barrel domain UIB01_RS08620 PF03473 MOSC domain UIB01_RS08625 PF14718 Soluble lytic murein transglycosylase L domain UIB01_RS08625 PF01464 Transglycosylase SLT domain UIB01_RS08630 PF12848 ABC transporter UIB01_RS08630 PF16326 ABC transporter C-terminal domain UIB01_RS08630 PF00005 ABC transporter UIB01_RS08640 PF00582 Universal stress protein family UIB01_RS08650 PF13230 Glutamine amidotransferases class-II UIB01_RS08670 PF00004 ATPase family associated with various cellular activities (AAA) UIB01_RS08670 PF07724 AAA domain (Cdc48 subfamily) UIB01_RS08670 PF17871 AAA lid domain UIB01_RS08670 PF10431 C-terminal, D2-small domain, of ClpB protein UIB01_RS08670 PF02861 Clp amino terminal domain, pathogenicity island component UIB01_RS08680 PF00291 Pyridoxal-phosphate dependent enzyme UIB01_RS08690 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) UIB01_RS08705 PF04304 Protein of unknown function (DUF454) UIB01_RS08715 PF00271 Helicase conserved C-terminal domain UIB01_RS08715 PF09382 RQC domain UIB01_RS08715 PF00270 DEAD/DEAH box helicase UIB01_RS08715 PF00570 HRDC domain UIB01_RS08715 PF16124 RecQ zinc-binding UIB01_RS08725 PF01734 Patatin-like phospholipase UIB01_RS08740 PF12833 Helix-turn-helix domain UIB01_RS08740 PF06719 AraC-type transcriptional regulator N-terminus UIB01_RS08745 PF00211 Adenylate and Guanylate cyclase catalytic domain UIB01_RS08755 PF12833 Helix-turn-helix domain UIB01_RS08755 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term UIB01_RS08760 PF05661 Protein of unknown function (DUF808) UIB01_RS08765 PF02386 Cation transport protein UIB01_RS08770 PF03692 Putative zinc- or iron-chelating domain UIB01_RS08775 PF00881 Nitroreductase family UIB01_RS08780 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS08780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS08780 PF08521 Two-component sensor kinase N-terminal UIB01_RS08790 PF00486 Transcriptional regulatory protein, C terminal UIB01_RS08790 PF00072 Response regulator receiver domain UIB01_RS08800 PF03795 YCII-related domain UIB01_RS08805 PF02811 PHP domain UIB01_RS08810 PF01300 Telomere recombination UIB01_RS08815 PF00579 tRNA synthetases class I (W and Y) UIB01_RS08820 PF02616 Segregation and condensation protein ScpA UIB01_RS08825 PF04079 Segregation and condensation complex subunit ScpB UIB01_RS08830 PF00920 Dehydratase family UIB01_RS08835 PF02685 Glucokinase UIB01_RS08840 PF00486 Transcriptional regulatory protein, C terminal UIB01_RS08840 PF00072 Response regulator receiver domain UIB01_RS08845 PF00672 HAMP domain UIB01_RS08845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS08845 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS08850 PF01547 Bacterial extracellular solute-binding protein UIB01_RS08855 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS08860 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS08865 PF00005 ABC transporter UIB01_RS08865 PF08402 TOBE domain UIB01_RS08870 PF02264 LamB porin UIB01_RS08885 PF01264 Chorismate synthase UIB01_RS08890 PF12832 MFS_1 like family UIB01_RS08895 PF03079 ARD/ARD' family UIB01_RS08915 PF00730 HhH-GPD superfamily base excision DNA repair protein UIB01_RS08915 PF06029 AlkA N-terminal domain UIB01_RS08915 PF12833 Helix-turn-helix domain UIB01_RS08915 PF02805 Metal binding domain of Ada UIB01_RS08920 PF17284 Spermidine synthase tetramerisation domain UIB01_RS08925 PF14403 Circularly permuted ATP-grasp type 2 UIB01_RS08930 PF14403 Circularly permuted ATP-grasp type 2 UIB01_RS08930 PF04168 A predicted alpha-helical domain with a conserved ER motif. UIB01_RS08935 PF01841 Transglutaminase-like superfamily UIB01_RS08935 PF08379 Bacterial transglutaminase-like N-terminal region UIB01_RS08970 PF01513 ATP-NAD kinase UIB01_RS08980 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease UIB01_RS08980 PF01694 Rhomboid family UIB01_RS08995 PF01433 Peptidase family M1 domain UIB01_RS08995 PF17432 Domain of unknown function (DUF3458_C) ARM repeats UIB01_RS08995 PF11940 Domain of unknown function (DUF3458) Ig-like fold UIB01_RS09000 PF14870 Photosynthesis system II assembly factor YCF48 UIB01_RS09010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UIB01_RS09015 PF01568 Molydopterin dinucleotide binding domain UIB01_RS09015 PF00384 Molybdopterin oxidoreductase UIB01_RS09015 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UIB01_RS09015 PF04324 BFD-like [2Fe-2S] binding domain UIB01_RS09020 PF00355 Rieske [2Fe-2S] domain UIB01_RS09025 PF01077 Nitrite and sulphite reductase 4Fe-4S domain UIB01_RS09025 PF18267 Rubredoxin NAD+ reductase C-terminal domain UIB01_RS09025 PF04324 BFD-like [2Fe-2S] binding domain UIB01_RS09025 PF07992 Pyridine nucleotide-disulphide oxidoreductase UIB01_RS09025 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain UIB01_RS09035 PF00069 Protein kinase domain UIB01_RS09035 PF03793 PASTA domain UIB01_RS09040 PF07690 Major Facilitator Superfamily UIB01_RS09045 PF00294 pfkB family carbohydrate kinase UIB01_RS09055 PF08376 Nitrate and nitrite sensing UIB01_RS09055 PF03861 ANTAR domain UIB01_RS09085 PF01882 Protein of unknown function DUF58 UIB01_RS09090 PF17863 AAA lid domain UIB01_RS09090 PF07726 ATPase family associated with various cellular activities (AAA) UIB01_RS09095 PF05088 Bacterial NAD-glutamate dehydrogenase UIB01_RS09110 PF01180 Dihydroorotate dehydrogenase UIB01_RS09115 PF10672 S-adenosylmethionine-dependent methyltransferase UIB01_RS09115 PF02926 THUMP domain UIB01_RS09115 PF01170 Putative RNA methylase family UPF0020 UIB01_RS09120 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family UIB01_RS09125 PF04320 Protein with unknown function (DUF469) UIB01_RS09135 PF01966 HD domain UIB01_RS09155 PF03573 outer membrane porin, OprD family UIB01_RS09175 PF12804 MobA-like NTP transferase domain UIB01_RS09195 PF01266 FAD dependent oxidoreductase UIB01_RS09205 PF02824 TGS domain UIB01_RS09205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UIB01_RS09205 PF03129 Anticodon binding domain UIB01_RS09205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UIB01_RS09210 PF00707 Translation initiation factor IF-3, C-terminal domain UIB01_RS09210 PF05198 Translation initiation factor IF-3, N-terminal domain UIB01_RS09215 PF01632 Ribosomal protein L35 UIB01_RS09220 PF00453 Ribosomal protein L20 UIB01_RS09225 PF01409 tRNA synthetases class II core domain (F) UIB01_RS09225 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain UIB01_RS09230 PF03483 B3/4 domain UIB01_RS09230 PF03484 tRNA synthetase B5 domain UIB01_RS09230 PF03147 Ferredoxin-fold anticodon binding domain UIB01_RS09230 PF01588 Putative tRNA binding domain UIB01_RS09230 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain UIB01_RS09235 PF00216 Bacterial DNA-binding protein UIB01_RS09270 PF03743 Bacterial conjugation TrbI-like protein UIB01_RS09300 PF03135 CagE, TrbE, VirB family, component of type IV transporter system UIB01_RS09315 PF00437 Type II/IV secretion system protein UIB01_RS09325 PF02534 Type IV secretory system Conjugative DNA transfer UIB01_RS09345 PF02514 CobN/Magnesium Chelatase UIB01_RS09345 PF11965 Domain of unknown function (DUF3479) UIB01_RS09350 PF07715 TonB-dependent Receptor Plug Domain UIB01_RS09350 PF00593 TonB dependent receptor UIB01_RS09355 PF08808 RES domain UIB01_RS09365 PF03466 LysR substrate binding domain UIB01_RS09365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS09375 PF00733 Asparagine synthase UIB01_RS09375 PF13537 Glutamine amidotransferase domain UIB01_RS09390 PF00155 Aminotransferase class I and II UIB01_RS09400 PF00672 HAMP domain UIB01_RS09400 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS09400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS09405 PF00486 Transcriptional regulatory protein, C terminal UIB01_RS09405 PF00072 Response regulator receiver domain UIB01_RS09420 PF04945 YHS domain UIB01_RS09425 PF00403 Heavy-metal-associated domain UIB01_RS09425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UIB01_RS09425 PF07992 Pyridine nucleotide-disulphide oxidoreductase UIB01_RS09435 PF02683 Cytochrome C biogenesis protein transmembrane region UIB01_RS09435 PF11412 Disulphide bond corrector protein DsbC UIB01_RS09470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UIB01_RS09475 PF00873 AcrB/AcrD/AcrF family UIB01_RS09500 PF13614 AAA domain UIB01_RS09520 PF01865 Protein of unknown function DUF47 UIB01_RS09535 PF02599 Global regulator protein family UIB01_RS09545 PF02586 SOS response associated peptidase (SRAP) UIB01_RS09550 PF01336 OB-fold nucleic acid binding domain UIB01_RS09550 PF07733 Bacterial DNA polymerase III alpha NTPase domain UIB01_RS09550 PF17657 Bacterial DNA polymerase III alpha subunit finger domain UIB01_RS09550 PF02811 PHP domain UIB01_RS09550 PF14579 Helix-hairpin-helix motif UIB01_RS09555 PF04231 Endonuclease I UIB01_RS09570 PF07007 Lysozyme inhibitor LprI UIB01_RS09575 PF00664 ABC transporter transmembrane region UIB01_RS09575 PF00005 ABC transporter UIB01_RS09580 PF12706 Beta-lactamase superfamily domain UIB01_RS09585 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS09585 PF12833 Helix-turn-helix domain UIB01_RS09585 PF07494 Two component regulator propeller UIB01_RS09585 PF00072 Response regulator receiver domain UIB01_RS09585 PF07495 Y_Y_Y domain UIB01_RS09585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS09590 PF00857 Isochorismatase family UIB01_RS09595 PF01965 DJ-1/PfpI family UIB01_RS09605 PF00005 ABC transporter UIB01_RS09610 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS09615 PF00497 Bacterial extracellular solute-binding proteins, family 3 UIB01_RS09620 PF00291 Pyridoxal-phosphate dependent enzyme UIB01_RS09660 PF00580 UvrD/REP helicase N-terminal domain UIB01_RS09660 PF13361 UvrD-like helicase C-terminal domain UIB01_RS09690 PF03852 DNA mismatch endonuclease Vsr UIB01_RS09695 PF00145 C-5 cytosine-specific DNA methylase UIB01_RS09700 PF08676 MutL C terminal dimerisation domain UIB01_RS09700 PF01119 DNA mismatch repair protein, C-terminal domain UIB01_RS09780 PF00004 ATPase family associated with various cellular activities (AAA) UIB01_RS09780 PF17862 AAA+ lid domain UIB01_RS09780 PF01434 Peptidase family M41 UIB01_RS09825 PF07690 Major Facilitator Superfamily UIB01_RS09830 PF01636 Phosphotransferase enzyme family UIB01_RS09835 PF00376 MerR family regulatory protein UIB01_RS09835 PF09278 MerR, DNA binding UIB01_RS09850 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UIB01_RS09855 PF00034 Cytochrome c UIB01_RS09855 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UIB01_RS09870 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term UIB01_RS09870 PF12833 Helix-turn-helix domain UIB01_RS09875 PF00171 Aldehyde dehydrogenase family UIB01_RS09880 PF04346 Ethanolamine utilisation protein, EutH UIB01_RS09885 PF06751 Ethanolamine ammonia lyase large subunit (EutB) UIB01_RS09890 PF05985 Ethanolamine ammonia-lyase light chain (EutC) UIB01_RS09895 PF01590 GAF domain UIB01_RS09895 PF00158 Sigma-54 interaction domain UIB01_RS09895 PF02954 Bacterial regulatory protein, Fis family UIB01_RS09900 PF00171 Aldehyde dehydrogenase family UIB01_RS09905 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UIB01_RS09905 PF13360 PQQ-like domain UIB01_RS09910 PF00593 TonB dependent receptor UIB01_RS09910 PF07715 TonB-dependent Receptor Plug Domain UIB01_RS09915 PF00224 Pyruvate kinase, barrel domain UIB01_RS09915 PF02887 Pyruvate kinase, alpha/beta domain UIB01_RS09920 PF04608 Phosphatidylglycerophosphatase A UIB01_RS09925 PF03471 Transporter associated domain UIB01_RS09925 PF00999 Sodium/hydrogen exchanger family UIB01_RS09925 PF02080 TrkA-C domain UIB01_RS09930 PF00710 Asparaginase, N-terminal UIB01_RS09930 PF17763 Glutaminase/Asparaginase C-terminal domain UIB01_RS09935 PF03466 LysR substrate binding domain UIB01_RS09935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS09940 PF00375 Sodium:dicarboxylate symporter family UIB01_RS09945 PF14698 Argininosuccinate lyase C-terminal UIB01_RS09945 PF00206 Lyase UIB01_RS09950 PF03573 outer membrane porin, OprD family UIB01_RS09960 PF04002 RadC-like JAB domain UIB01_RS09965 PF05284 Protein of unknown function (DUF736) UIB01_RS10015 PF12538 DNA transporter UIB01_RS10015 PF01580 FtsK/SpoIIIE family UIB01_RS10040 PF00092 von Willebrand factor type A domain UIB01_RS10045 PF01609 Transposase DDE domain UIB01_RS10045 PF05598 Transposase domain (DUF772) UIB01_RS10050 PF01008 Initiation factor 2 subunit family UIB01_RS10055 PF03989 DNA gyrase C-terminal domain, beta-propeller UIB01_RS10055 PF00521 DNA gyrase/topoisomerase IV, subunit A UIB01_RS10060 PF00266 Aminotransferase class-V UIB01_RS10065 PF01842 ACT domain UIB01_RS10065 PF01817 Chorismate mutase type II UIB01_RS10065 PF00800 Prephenate dehydratase UIB01_RS10070 PF00155 Aminotransferase class I and II UIB01_RS10075 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) UIB01_RS10080 PF02224 Cytidylate kinase UIB01_RS10085 PF00575 S1 RNA binding domain UIB01_RS10095 PF00155 Aminotransferase class I and II UIB01_RS10100 PF02798 Glutathione S-transferase, N-terminal domain UIB01_RS10105 PF01227 GTP cyclohydrolase I UIB01_RS10110 PF01713 Smr domain UIB01_RS10120 PF05175 Methyltransferase small domain UIB01_RS10125 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain UIB01_RS10125 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain UIB01_RS10130 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase UIB01_RS10135 PF01081 KDPG and KHG aldolase UIB01_RS10140 PF01479 S4 domain UIB01_RS10140 PF00849 RNA pseudouridylate synthase UIB01_RS10145 PF00106 short chain dehydrogenase UIB01_RS10150 PF13419 Haloacid dehalogenase-like hydrolase UIB01_RS10160 PF01979 Amidohydrolase family UIB01_RS10200 PF13726 Na+-H+ antiporter family UIB01_RS10200 PF03553 Na+/H+ antiporter family UIB01_RS10205 PF01594 AI-2E family transporter UIB01_RS10215 PF00463 Isocitrate lyase family UIB01_RS10230 PF13673 Acetyltransferase (GNAT) domain UIB01_RS10235 PF08007 Cupin superfamily protein UIB01_RS10240 PF00206 Lyase UIB01_RS10240 PF08328 Adenylosuccinate lyase C-terminal UIB01_RS10245 PF04356 Protein of unknown function (DUF489) UIB01_RS10255 PF00293 NUDIX domain UIB01_RS10260 PF03971 Monomeric isocitrate dehydrogenase UIB01_RS10265 PF00180 Isocitrate/isopropylmalate dehydrogenase UIB01_RS10275 PF02617 ATP-dependent Clp protease adaptor protein ClpS UIB01_RS10280 PF00004 ATPase family associated with various cellular activities (AAA) UIB01_RS10280 PF07724 AAA domain (Cdc48 subfamily) UIB01_RS10280 PF17871 AAA lid domain UIB01_RS10280 PF02861 Clp amino terminal domain, pathogenicity island component UIB01_RS10280 PF10431 C-terminal, D2-small domain, of ClpB protein UIB01_RS10285 PF01176 Translation initiation factor 1A / IF-1 UIB01_RS10290 PF04376 Arginine-tRNA-protein transferase, N terminus UIB01_RS10290 PF04377 Arginine-tRNA-protein transferase, C terminus UIB01_RS10295 PF03588 Leucyl/phenylalanyl-tRNA protein transferase UIB01_RS10300 PF07992 Pyridine nucleotide-disulphide oxidoreductase UIB01_RS10305 PF01580 FtsK/SpoIIIE family UIB01_RS10305 PF09397 Ftsk gamma domain UIB01_RS10305 PF17854 FtsK alpha domain UIB01_RS10305 PF13491 4TM region of DNA translocase FtsK/SpoIIIE UIB01_RS10310 PF03548 Outer membrane lipoprotein carrier protein LolA UIB01_RS10315 PF00004 ATPase family associated with various cellular activities (AAA) UIB01_RS10315 PF16193 AAA C-terminal domain UIB01_RS10315 PF12002 MgsA AAA+ ATPase C terminal UIB01_RS10320 PF02537 CrcB-like protein, Camphor Resistance (CrcB) UIB01_RS10325 PF02403 Seryl-tRNA synthetase N-terminal domain UIB01_RS10325 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UIB01_RS10330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UIB01_RS10330 PF14824 Sirohaem biosynthesis protein central UIB01_RS10330 PF10414 Sirohaem synthase dimerisation region UIB01_RS10335 PF00196 Bacterial regulatory proteins, luxR family UIB01_RS10335 PF00072 Response regulator receiver domain UIB01_RS10350 PF00005 ABC transporter UIB01_RS10370 PF00672 HAMP domain UIB01_RS10370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS10380 PF07730 Histidine kinase UIB01_RS10380 PF05231 MASE1 UIB01_RS10380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS10385 PF00196 Bacterial regulatory proteins, luxR family UIB01_RS10385 PF00072 Response regulator receiver domain UIB01_RS10400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS10400 PF08447 PAS fold UIB01_RS10400 PF13426 PAS domain UIB01_RS10410 PF01011 PQQ enzyme repeat UIB01_RS10410 PF13360 PQQ-like domain UIB01_RS10415 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UIB01_RS10430 PF16123 Hydroxyacylglutathione hydrolase C-terminus UIB01_RS10430 PF00753 Metallo-beta-lactamase superfamily UIB01_RS10440 PF01011 PQQ enzyme repeat UIB01_RS10440 PF13360 PQQ-like domain UIB01_RS10445 PF12833 Helix-turn-helix domain UIB01_RS10460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UIB01_RS10460 PF00005 ABC transporter UIB01_RS10465 PF12911 N-terminal TM domain of oligopeptide transport permease C UIB01_RS10465 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS10470 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS10475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UIB01_RS10480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UIB01_RS10490 PF01476 LysM domain UIB01_RS10490 PF01464 Transglycosylase SLT domain UIB01_RS10495 PF00753 Metallo-beta-lactamase superfamily UIB01_RS10495 PF16123 Hydroxyacylglutathione hydrolase C-terminus UIB01_RS10505 PF00075 RNase H UIB01_RS10510 PF00929 Exonuclease UIB01_RS10515 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain UIB01_RS10515 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain UIB01_RS10515 PF01276 Orn/Lys/Arg decarboxylase, major domain UIB01_RS10520 PF00378 Enoyl-CoA hydratase/isomerase UIB01_RS10530 PF00293 NUDIX domain UIB01_RS10530 PF09297 NADH pyrophosphatase zinc ribbon domain UIB01_RS10530 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain UIB01_RS10535 PF01925 Sulfite exporter TauE/SafE UIB01_RS10565 PF08496 Peptidase family S49 N-terminal UIB01_RS10565 PF01343 Peptidase family S49 UIB01_RS10570 PF00107 Zinc-binding dehydrogenase UIB01_RS10570 PF08240 Alcohol dehydrogenase GroES-like domain UIB01_RS10580 PF01077 Nitrite and sulphite reductase 4Fe-4S domain UIB01_RS10580 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain UIB01_RS10590 PF00011 Hsp20/alpha crystallin family UIB01_RS10605 PF04055 Radical SAM superfamily UIB01_RS10610 PF07690 Major Facilitator Superfamily UIB01_RS10635 PF01757 Acyltransferase family UIB01_RS10645 PF08448 PAS fold UIB01_RS10645 PF00563 EAL domain UIB01_RS10645 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS10645 PF08447 PAS fold UIB01_RS10650 PF02965 Vitamin B12 dependent methionine synthase, activation domain UIB01_RS10650 PF02607 B12 binding domain UIB01_RS10650 PF02310 B12 binding domain UIB01_RS10650 PF02574 Homocysteine S-methyltransferase UIB01_RS10650 PF00809 Pterin binding enzyme UIB01_RS10660 PF01106 NifU-like domain UIB01_RS10660 PF01521 Iron-sulphur cluster biosynthesis UIB01_RS10665 PF00072 Response regulator receiver domain UIB01_RS10670 PF08447 PAS fold UIB01_RS10670 PF08448 PAS fold UIB01_RS10670 PF05231 MASE1 UIB01_RS10670 PF00563 EAL domain UIB01_RS10670 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS10670 PF13426 PAS domain UIB01_RS10680 PF04239 Protein of unknown function (DUF421) UIB01_RS10695 PF00672 HAMP domain UIB01_RS10695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS10695 PF17200 Single Cache domain 2 UIB01_RS10700 PF02673 Bacitracin resistance protein BacA UIB01_RS10710 PF00005 ABC transporter UIB01_RS10710 PF12848 ABC transporter UIB01_RS10715 PF07715 TonB-dependent Receptor Plug Domain UIB01_RS10715 PF00593 TonB dependent receptor UIB01_RS10730 PF01266 FAD dependent oxidoreductase UIB01_RS10735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS10735 PF03466 LysR substrate binding domain UIB01_RS10740 PF03969 AFG1-like ATPase UIB01_RS10755 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component UIB01_RS10760 PF03480 Bacterial extracellular solute-binding protein, family 7 UIB01_RS10765 PF00356 Bacterial regulatory proteins, lacI family UIB01_RS10770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS10770 PF03466 LysR substrate binding domain UIB01_RS10775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UIB01_RS10775 PF02770 Acyl-CoA dehydrogenase, middle domain UIB01_RS10775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UIB01_RS10780 PF12849 PBP superfamily domain UIB01_RS10785 PF03372 Endonuclease/Exonuclease/phosphatase family UIB01_RS10795 PF01103 Surface antigen UIB01_RS10795 PF17243 POTRA domain TamA domain 1 UIB01_RS10795 PF07244 Surface antigen variable number repeat UIB01_RS10800 PF04357 TamB, inner membrane protein subunit of TAM complex UIB01_RS10805 PF01235 Sodium:alanine symporter family UIB01_RS10810 PF08534 Redoxin UIB01_RS10820 PF03023 Lipid II flippase MurJ UIB01_RS10825 PF13533 Biotin-lipoyl like UIB01_RS10830 PF00873 AcrB/AcrD/AcrF family UIB01_RS10835 PF00873 AcrB/AcrD/AcrF family UIB01_RS10840 PF02321 Outer membrane efflux protein UIB01_RS10845 PF03480 Bacterial extracellular solute-binding protein, family 7 UIB01_RS10850 PF02321 Outer membrane efflux protein UIB01_RS10855 PF00873 AcrB/AcrD/AcrF family UIB01_RS10860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UIB01_RS10865 PF03466 LysR substrate binding domain UIB01_RS10865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS10870 PF08659 KR domain UIB01_RS10870 PF00550 Phosphopantetheine attachment site UIB01_RS10870 PF14765 Polyketide synthase dehydratase UIB01_RS10870 PF02801 Beta-ketoacyl synthase, C-terminal domain UIB01_RS10870 PF00109 Beta-ketoacyl synthase, N-terminal domain UIB01_RS10870 PF08240 Alcohol dehydrogenase GroES-like domain UIB01_RS10870 PF00698 Acyl transferase domain UIB01_RS10870 PF16197 Ketoacyl-synthetase C-terminal extension UIB01_RS10880 PF02735 Ku70/Ku80 beta-barrel domain UIB01_RS10885 PF01068 ATP dependent DNA ligase domain UIB01_RS10885 PF04679 ATP dependent DNA ligase C terminal region UIB01_RS10885 PF13298 DNA polymerase Ligase (LigD) UIB01_RS10900 PF13247 4Fe-4S dicluster domain UIB01_RS10900 PF12800 4Fe-4S binding domain UIB01_RS10900 PF09163 Formate dehydrogenase N, transmembrane UIB01_RS10905 PF01292 Prokaryotic cytochrome b561 UIB01_RS10910 PF04216 Protein involved in formate dehydrogenase formation UIB01_RS10915 PF11896 Domain of unknown function (DUF3416) UIB01_RS10915 PF00128 Alpha amylase, catalytic domain UIB01_RS10920 PF00128 Alpha amylase, catalytic domain UIB01_RS10920 PF16657 Maltogenic Amylase, C-terminal domain UIB01_RS10925 PF00128 Alpha amylase, catalytic domain UIB01_RS10925 PF02806 Alpha amylase, C-terminal all-beta domain UIB01_RS10925 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) UIB01_RS10930 PF03706 Lysylphosphatidylglycerol synthase TM region UIB01_RS10935 PF13091 PLD-like domain UIB01_RS10940 PF03372 Endonuclease/Exonuclease/phosphatase family UIB01_RS10950 PF03466 LysR substrate binding domain UIB01_RS10950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS10955 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase UIB01_RS10965 PF01551 Peptidase family M23 UIB01_RS10965 PF01476 LysM domain UIB01_RS10965 PF08525 Opacity-associated protein A N-terminal motif UIB01_RS10970 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) UIB01_RS10970 PF00128 Alpha amylase, catalytic domain UIB01_RS10980 PF00128 Alpha amylase, catalytic domain UIB01_RS10985 PF02446 4-alpha-glucanotransferase UIB01_RS10990 PF11941 Domain of unknown function (DUF3459) UIB01_RS10990 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) UIB01_RS10990 PF00128 Alpha amylase, catalytic domain UIB01_RS10995 PF00534 Glycosyl transferases group 1 UIB01_RS10995 PF08323 Starch synthase catalytic domain UIB01_RS11000 PF02464 Competence-damaged protein UIB01_RS11000 PF18146 Damage-inducible protein CinA KH domain UIB01_RS11000 PF00994 Probable molybdopterin binding domain UIB01_RS11005 PF12795 Mechanosensitive ion channel porin domain UIB01_RS11005 PF00924 Mechanosensitive ion channel UIB01_RS11005 PF12794 Mechanosensitive ion channel inner membrane domain 1 UIB01_RS11010 PF05974 Domain of unknown function (DUF892) UIB01_RS11030 PF13298 DNA polymerase Ligase (LigD) UIB01_RS11030 PF04679 ATP dependent DNA ligase C terminal region UIB01_RS11030 PF01068 ATP dependent DNA ligase domain UIB01_RS11040 PF07759 Protein of unknown function (DUF1615) UIB01_RS11050 PF03466 LysR substrate binding domain UIB01_RS11050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS11055 PF02321 Outer membrane efflux protein UIB01_RS11060 PF13533 Biotin-lipoyl like UIB01_RS11065 PF07869 Protein of unknown function (DUF1656) UIB01_RS11070 PF04632 Fusaric acid resistance protein family UIB01_RS11075 PF02311 AraC-like ligand binding domain UIB01_RS11075 PF12833 Helix-turn-helix domain UIB01_RS11095 PF01292 Prokaryotic cytochrome b561 UIB01_RS11110 PF02817 e3 binding domain UIB01_RS11110 PF00364 Biotin-requiring enzyme UIB01_RS11110 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UIB01_RS11115 PF00364 Biotin-requiring enzyme UIB01_RS11115 PF02779 Transketolase, pyrimidine binding domain UIB01_RS11115 PF02780 Transketolase, C-terminal domain UIB01_RS11120 PF00676 Dehydrogenase E1 component UIB01_RS11125 PF13193 AMP-binding enzyme C-terminal domain UIB01_RS11125 PF00501 AMP-binding enzyme UIB01_RS11135 PF14572 Phosphoribosyl synthetase-associated domain UIB01_RS11135 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase UIB01_RS11140 PF00325 Bacterial regulatory proteins, crp family UIB01_RS11140 PF00027 Cyclic nucleotide-binding domain UIB01_RS11145 PF05362 Lon protease (S16) C-terminal proteolytic domain UIB01_RS11145 PF13654 AAA domain UIB01_RS11155 PF00118 TCP-1/cpn60 chaperonin family UIB01_RS11165 PF07992 Pyridine nucleotide-disulphide oxidoreductase UIB01_RS11165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UIB01_RS11170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UIB01_RS11175 PF00483 Nucleotidyl transferase UIB01_RS11180 PF00672 HAMP domain UIB01_RS11180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS11180 PF12729 Four helix bundle sensory module for signal transduction UIB01_RS11185 PF06969 HemN C-terminal domain UIB01_RS11185 PF04055 Radical SAM superfamily UIB01_RS11190 PF18081 Fanconi anemia-associated nuclease SAP domain UIB01_RS11190 PF08774 VRR-NUC domain UIB01_RS11205 PF09722 Protein of unknown function (DUF2384) UIB01_RS11220 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain UIB01_RS11220 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain UIB01_RS11225 PF02694 Uncharacterised BCR, YnfA/UPF0060 family UIB01_RS11235 PF03358 NADPH-dependent FMN reductase UIB01_RS11240 PF01451 Low molecular weight phosphotyrosine protein phosphatase UIB01_RS11260 PF01758 Sodium Bile acid symporter family UIB01_RS11295 PF01066 CDP-alcohol phosphatidyltransferase UIB01_RS11300 PF01541 GIY-YIG catalytic domain UIB01_RS11300 PF08459 UvrC Helix-hairpin-helix N-terminal UIB01_RS11300 PF02151 UvrB/uvrC motif UIB01_RS11305 PF00196 Bacterial regulatory proteins, luxR family UIB01_RS11305 PF00072 Response regulator receiver domain UIB01_RS11315 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS11315 PF00072 Response regulator receiver domain UIB01_RS11315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS11315 PF09456 RcsC Alpha-Beta-Loop (ABL) UIB01_RS11320 PF00465 Iron-containing alcohol dehydrogenase UIB01_RS11325 PF00326 Prolyl oligopeptidase family UIB01_RS11330 PF13186 Iron-sulfur cluster-binding domain UIB01_RS11330 PF04055 Radical SAM superfamily UIB01_RS11335 PF05402 Coenzyme PQQ synthesis protein D (PqqD) UIB01_RS11340 PF03070 TENA/THI-4/PQQC family UIB01_RS11345 PF12706 Beta-lactamase superfamily domain UIB01_RS11350 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UIB01_RS11350 PF07992 Pyridine nucleotide-disulphide oxidoreductase UIB01_RS11355 PF00171 Aldehyde dehydrogenase family UIB01_RS11360 PF05402 Coenzyme PQQ synthesis protein D (PqqD) UIB01_RS11365 PF13186 Iron-sulfur cluster-binding domain UIB01_RS11365 PF04055 Radical SAM superfamily UIB01_RS11375 PF00266 Aminotransferase class-V UIB01_RS11380 PF01180 Dihydroorotate dehydrogenase UIB01_RS11385 PF09312 SurA N-terminal domain UIB01_RS11385 PF00639 PPIC-type PPIASE domain UIB01_RS11390 PF00216 Bacterial DNA-binding protein UIB01_RS11395 PF05362 Lon protease (S16) C-terminal proteolytic domain UIB01_RS11395 PF00004 ATPase family associated with various cellular activities (AAA) UIB01_RS11395 PF02190 ATP-dependent protease La (LON) substrate-binding domain UIB01_RS11400 PF07724 AAA domain (Cdc48 subfamily) UIB01_RS11400 PF10431 C-terminal, D2-small domain, of ClpB protein UIB01_RS11400 PF06689 ClpX C4-type zinc finger UIB01_RS11405 PF00574 Clp protease UIB01_RS11410 PF05697 Bacterial trigger factor protein (TF) UIB01_RS11410 PF05698 Bacterial trigger factor protein (TF) C-terminus UIB01_RS11410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UIB01_RS11415 PF01336 OB-fold nucleic acid binding domain UIB01_RS11415 PF02811 PHP domain UIB01_RS11415 PF14579 Helix-hairpin-helix motif UIB01_RS11415 PF17657 Bacterial DNA polymerase III alpha subunit finger domain UIB01_RS11415 PF07733 Bacterial DNA polymerase III alpha NTPase domain UIB01_RS11440 PF07729 FCD domain UIB01_RS11440 PF00392 Bacterial regulatory proteins, gntR family UIB01_RS11465 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain UIB01_RS11465 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain UIB01_RS11470 PF09190 DALR domain UIB01_RS11470 PF01406 tRNA synthetases class I (C) catalytic domain UIB01_RS11475 PF00749 tRNA synthetases class I (E and Q), catalytic domain UIB01_RS11475 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain UIB01_RS11480 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD UIB01_RS11485 PF00149 Calcineurin-like phosphoesterase UIB01_RS11490 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) UIB01_RS11505 PF11791 Aconitate B N-terminal domain UIB01_RS11505 PF06434 Aconitate hydratase 2 N-terminus UIB01_RS11505 PF00330 Aconitase family (aconitate hydratase) UIB01_RS11510 PF05736 OprF membrane domain UIB01_RS11510 PF00691 OmpA family UIB01_RS11520 PF05552 Conserved TM helix UIB01_RS11530 PF01544 CorA-like Mg2+ transporter protein UIB01_RS11535 PF03737 Aldolase/RraA UIB01_RS11540 PF00391 PEP-utilising enzyme, mobile domain UIB01_RS11540 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain UIB01_RS11540 PF02896 PEP-utilising enzyme, TIM barrel domain UIB01_RS11545 PF03618 Kinase/pyrophosphorylase UIB01_RS11550 PF04303 PrpF protein UIB01_RS11555 PF00330 Aconitase family (aconitate hydratase) UIB01_RS11555 PF00694 Aconitase C-terminal domain UIB01_RS11560 PF00285 Citrate synthase, C-terminal domain UIB01_RS11570 PF07729 FCD domain UIB01_RS11570 PF00392 Bacterial regulatory proteins, gntR family UIB01_RS11590 PF04715 Anthranilate synthase component I, N terminal region UIB01_RS11590 PF00425 chorismate binding enzyme UIB01_RS11600 PF01507 Phosphoadenosine phosphosulfate reductase family UIB01_RS11605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS11605 PF03466 LysR substrate binding domain UIB01_RS11610 PF08546 Ketopantoate reductase PanE/ApbA C terminal UIB01_RS11610 PF02558 Ketopantoate reductase PanE/ApbA UIB01_RS11615 PF00793 DAHP synthetase I family UIB01_RS11630 PF11839 Alanine-zipper, major outer membrane lipoprotein UIB01_RS11635 PF17969 L,D-transpeptidase C-terminal domain UIB01_RS11635 PF03734 L,D-transpeptidase catalytic domain UIB01_RS11645 PF13472 GDSL-like Lipase/Acylhydrolase family UIB01_RS11650 PF00005 ABC transporter UIB01_RS11660 PF01272 Transcription elongation factor, GreA/GreB, C-term UIB01_RS11660 PF03449 Transcription elongation factor, N-terminal UIB01_RS11665 PF00561 alpha/beta hydrolase fold UIB01_RS11670 PF03280 Proteobacterial lipase chaperone protein UIB01_RS11675 PF00497 Bacterial extracellular solute-binding proteins, family 3 UIB01_RS11675 PF01464 Transglycosylase SLT domain UIB01_RS11680 PF01026 TatD related DNase UIB01_RS11685 PF12729 Four helix bundle sensory module for signal transduction UIB01_RS11685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS11685 PF00672 HAMP domain UIB01_RS11695 PF00005 ABC transporter UIB01_RS11695 PF08402 TOBE domain UIB01_RS11710 PF00364 Biotin-requiring enzyme UIB01_RS11710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UIB01_RS11710 PF18140 Propionyl-coenzyme A carboxylase BT domain UIB01_RS11710 PF02785 Biotin carboxylase C-terminal domain UIB01_RS11710 PF00289 Biotin carboxylase, N-terminal domain UIB01_RS11715 PF01425 Amidase UIB01_RS11720 PF00248 Aldo/keto reductase family UIB01_RS11725 PF09084 NMT1/THI5 like UIB01_RS11750 PF02633 Creatinine amidohydrolase UIB01_RS11755 PF00857 Isochorismatase family UIB01_RS11760 PF00753 Metallo-beta-lactamase superfamily UIB01_RS11770 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS11775 PF00005 ABC transporter UIB01_RS11780 PF00561 alpha/beta hydrolase fold UIB01_RS11785 PF00120 Glutamine synthetase, catalytic domain UIB01_RS11795 PF08361 MAATS-type transcriptional repressor, C-terminal region UIB01_RS11795 PF00440 Bacterial regulatory proteins, tetR family UIB01_RS11810 PF01027 Inhibitor of apoptosis-promoting Bax1 UIB01_RS11820 PF02635 DsrE/DsrF-like family UIB01_RS11825 PF02635 DsrE/DsrF-like family UIB01_RS11835 PF04358 DsrC like protein UIB01_RS11840 PF02885 Glycosyl transferase family, helical bundle domain UIB01_RS11840 PF00591 Glycosyl transferase family, a/b domain UIB01_RS11845 PF13409 Glutathione S-transferase, N-terminal domain UIB01_RS11850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS11850 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS11850 PF09456 RcsC Alpha-Beta-Loop (ABL) UIB01_RS11850 PF00072 Response regulator receiver domain UIB01_RS11865 PF00675 Insulinase (Peptidase family M16) UIB01_RS11865 PF05193 Peptidase M16 inactive domain UIB01_RS11870 PF13411 MerR HTH family regulatory protein UIB01_RS11885 PF01227 GTP cyclohydrolase I UIB01_RS11890 PF02152 Dihydroneopterin aldolase UIB01_RS11910 PF13426 PAS domain UIB01_RS11910 PF01740 STAS domain UIB01_RS11915 PF00563 EAL domain UIB01_RS11915 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS11915 PF03707 Bacterial signalling protein N terminal repeat UIB01_RS11920 PF00762 Ferrochelatase UIB01_RS11925 PF08338 Domain of unknown function (DUF1731) UIB01_RS11925 PF01370 NAD dependent epimerase/dehydratase family UIB01_RS11930 PF08349 Protein of unknown function (DUF1722) UIB01_RS11935 PF13411 MerR HTH family regulatory protein UIB01_RS11940 PF00875 DNA photolyase UIB01_RS11940 PF03441 FAD binding domain of DNA photolyase UIB01_RS11950 PF00106 short chain dehydrogenase UIB01_RS11970 PF00672 HAMP domain UIB01_RS11970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS11970 PF17200 Single Cache domain 2 UIB01_RS11975 PF06969 HemN C-terminal domain UIB01_RS11975 PF04055 Radical SAM superfamily UIB01_RS11980 PF02146 Sir2 family UIB01_RS11985 PF01077 Nitrite and sulphite reductase 4Fe-4S domain UIB01_RS11985 PF13806 Rieske-like [2Fe-2S] domain UIB01_RS11985 PF18267 Rubredoxin NAD+ reductase C-terminal domain UIB01_RS11985 PF07992 Pyridine nucleotide-disulphide oxidoreductase UIB01_RS11985 PF04324 BFD-like [2Fe-2S] binding domain UIB01_RS11985 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain UIB01_RS11990 PF04324 BFD-like [2Fe-2S] binding domain UIB01_RS11990 PF01077 Nitrite and sulphite reductase 4Fe-4S domain UIB01_RS11990 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain UIB01_RS11990 PF07992 Pyridine nucleotide-disulphide oxidoreductase UIB01_RS11990 PF18267 Rubredoxin NAD+ reductase C-terminal domain UIB01_RS11990 PF13806 Rieske-like [2Fe-2S] domain UIB01_RS11995 PF13361 UvrD-like helicase C-terminal domain UIB01_RS11995 PF00580 UvrD/REP helicase N-terminal domain UIB01_RS11995 PF12462 DNA helicase IV / RNA helicase N terminal UIB01_RS12000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS12000 PF13188 PAS domain UIB01_RS12000 PF00072 Response regulator receiver domain UIB01_RS12000 PF08448 PAS fold UIB01_RS12000 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS12015 PF02472 Biopolymer transport protein ExbD/TolR UIB01_RS12020 PF01618 MotA/TolQ/ExbB proton channel family UIB01_RS12025 PF02333 Phytase UIB01_RS12035 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS12035 PF05231 MASE1 UIB01_RS12035 PF08447 PAS fold UIB01_RS12035 PF08448 PAS fold UIB01_RS12035 PF13426 PAS domain UIB01_RS12035 PF00563 EAL domain UIB01_RS12040 PF12833 Helix-turn-helix domain UIB01_RS12040 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term UIB01_RS12045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS12045 PF03466 LysR substrate binding domain UIB01_RS12050 PF02634 FdhD/NarQ family UIB01_RS12055 PF00384 Molybdopterin oxidoreductase UIB01_RS12055 PF01568 Molydopterin dinucleotide binding domain UIB01_RS12070 PF02386 Cation transport protein UIB01_RS12075 PF08239 Bacterial SH3 domain UIB01_RS12090 PF11897 Protein of unknown function (DUF3417) UIB01_RS12090 PF00343 Carbohydrate phosphorylase UIB01_RS12095 PF00072 Response regulator receiver domain UIB01_RS12095 PF00486 Transcriptional regulatory protein, C terminal UIB01_RS12100 PF13493 Domain of unknown function (DUF4118) UIB01_RS12100 PF13492 GAF domain UIB01_RS12100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS12100 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS12100 PF02702 Osmosensitive K+ channel His kinase sensor domain UIB01_RS12105 PF02669 K+-transporting ATPase, c chain UIB01_RS12115 PF03814 Potassium-transporting ATPase A subunit UIB01_RS12125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS12125 PF03466 LysR substrate binding domain UIB01_RS12130 PF00171 Aldehyde dehydrogenase family UIB01_RS12135 PF00378 Enoyl-CoA hydratase/isomerase UIB01_RS12140 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase UIB01_RS12140 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UIB01_RS12145 PF00378 Enoyl-CoA hydratase/isomerase UIB01_RS12150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UIB01_RS12150 PF02770 Acyl-CoA dehydrogenase, middle domain UIB01_RS12150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UIB01_RS12160 PF02515 CoA-transferase family III UIB01_RS12165 PF13193 AMP-binding enzyme C-terminal domain UIB01_RS12165 PF00501 AMP-binding enzyme UIB01_RS12170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UIB01_RS12170 PF02770 Acyl-CoA dehydrogenase, middle domain UIB01_RS12170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UIB01_RS12175 PF00108 Thiolase, N-terminal domain UIB01_RS12175 PF02803 Thiolase, C-terminal domain UIB01_RS12180 PF00106 short chain dehydrogenase UIB01_RS12190 PF09335 SNARE associated Golgi protein UIB01_RS12215 PF01841 Transglutaminase-like superfamily UIB01_RS12215 PF11992 Domain of unknown function (DUF3488) UIB01_RS12215 PF13559 Domain of unknown function (DUF4129) UIB01_RS12225 PF07726 ATPase family associated with various cellular activities (AAA) UIB01_RS12225 PF17863 AAA lid domain UIB01_RS12230 PF00689 Cation transporting ATPase, C-terminus UIB01_RS12230 PF00690 Cation transporter/ATPase, N-terminus UIB01_RS12245 PF00586 AIR synthase related protein, N-terminal domain UIB01_RS12245 PF02769 AIR synthase related protein, C-terminal domain UIB01_RS12250 PF01734 Patatin-like phospholipase UIB01_RS12255 PF01594 AI-2E family transporter UIB01_RS12275 PF03061 Thioesterase superfamily UIB01_RS12290 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus UIB01_RS12290 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus UIB01_RS12295 PF07977 FabA-like domain UIB01_RS12300 PF00109 Beta-ketoacyl synthase, N-terminal domain UIB01_RS12300 PF02801 Beta-ketoacyl synthase, C-terminal domain UIB01_RS12305 PF12833 Helix-turn-helix domain UIB01_RS12305 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term UIB01_RS12310 PF02770 Acyl-CoA dehydrogenase, middle domain UIB01_RS12310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UIB01_RS12310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UIB01_RS12315 PF02803 Thiolase, C-terminal domain UIB01_RS12315 PF00108 Thiolase, N-terminal domain UIB01_RS12320 PF00501 AMP-binding enzyme UIB01_RS12320 PF13193 AMP-binding enzyme C-terminal domain UIB01_RS12325 PF00375 Sodium:dicarboxylate symporter family UIB01_RS12330 PF12729 Four helix bundle sensory module for signal transduction UIB01_RS12330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS12330 PF00672 HAMP domain UIB01_RS12335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS12335 PF00672 HAMP domain UIB01_RS12335 PF12729 Four helix bundle sensory module for signal transduction UIB01_RS12355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS12355 PF00183 Hsp90 protein UIB01_RS12380 PF05525 Branched-chain amino acid transport protein UIB01_RS12385 PF02629 CoA binding domain UIB01_RS12385 PF00549 CoA-ligase UIB01_RS12390 PF00549 CoA-ligase UIB01_RS12390 PF08442 ATP-grasp domain UIB01_RS12395 PF07992 Pyridine nucleotide-disulphide oxidoreductase UIB01_RS12395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UIB01_RS12400 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UIB01_RS12400 PF00364 Biotin-requiring enzyme UIB01_RS12400 PF02817 e3 binding domain UIB01_RS12405 PF02779 Transketolase, pyrimidine binding domain UIB01_RS12405 PF16870 2-oxoglutarate dehydrogenase C-terminal UIB01_RS12405 PF00676 Dehydrogenase E1 component UIB01_RS12405 PF16078 2-oxoglutarate dehydrogenase N-terminus UIB01_RS12410 PF13085 2Fe-2S iron-sulfur cluster binding domain UIB01_RS12415 PF00890 FAD binding domain UIB01_RS12415 PF02910 Fumarate reductase flavoprotein C-term UIB01_RS12420 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit UIB01_RS12425 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit UIB01_RS12430 PF00285 Citrate synthase, C-terminal domain UIB01_RS12440 PF06865 Pyrimidine/purine nucleoside phosphorylase UIB01_RS12450 PF02561 Flagellar protein FliS UIB01_RS12455 PF07196 Flagellin hook IN motif UIB01_RS12455 PF07195 Flagellar hook-associated protein 2 C-terminus UIB01_RS12455 PF02465 Flagellar hook-associated protein 2 N-terminus UIB01_RS12465 PF00700 Bacterial flagellin C-terminal helical region UIB01_RS12465 PF00669 Bacterial flagellin N-terminal helical region UIB01_RS12470 PF03119 NAD-dependent DNA ligase C4 zinc finger domain UIB01_RS12470 PF12826 Helix-hairpin-helix motif UIB01_RS12470 PF03120 NAD-dependent DNA ligase OB-fold domain UIB01_RS12470 PF01653 NAD-dependent DNA ligase adenylation domain UIB01_RS12470 PF00533 BRCA1 C Terminus (BRCT) domain UIB01_RS12475 PF04354 ZipA, C-terminal FtsZ-binding domain UIB01_RS12480 PF02463 RecF/RecN/SMC N terminal domain UIB01_RS12480 PF06470 SMC proteins Flexible Hinge Domain UIB01_RS12485 PF04055 Radical SAM superfamily UIB01_RS12485 PF06463 Molybdenum Cofactor Synthesis C UIB01_RS12490 PF00520 Ion transport protein UIB01_RS12490 PF00027 Cyclic nucleotide-binding domain UIB01_RS12505 PF00116 Cytochrome C oxidase subunit II, periplasmic domain UIB01_RS12505 PF02790 Cytochrome C oxidase subunit II, transmembrane domain UIB01_RS12505 PF00034 Cytochrome c UIB01_RS12510 PF00115 Cytochrome C and Quinol oxidase polypeptide I UIB01_RS12525 PF01206 Sulfurtransferase TusA UIB01_RS12530 PF18125 RlmM ferredoxin-like domain UIB01_RS12530 PF01728 FtsJ-like methyltransferase UIB01_RS12535 PF00694 Aconitase C-terminal domain UIB01_RS12535 PF00330 Aconitase family (aconitate hydratase) UIB01_RS12540 PF08447 PAS fold UIB01_RS12540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS12550 PF00115 Cytochrome C and Quinol oxidase polypeptide I UIB01_RS12560 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UIB01_RS12560 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP UIB01_RS12565 PF00115 Cytochrome C and Quinol oxidase polypeptide I UIB01_RS12580 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP UIB01_RS12580 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UIB01_RS12585 PF13746 4Fe-4S dicluster domain UIB01_RS12585 PF12801 4Fe-4S binding domain UIB01_RS12585 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase UIB01_RS12595 PF00403 Heavy-metal-associated domain UIB01_RS12610 PF02540 NAD synthase UIB01_RS12615 PF04055 Radical SAM superfamily UIB01_RS12615 PF06969 HemN C-terminal domain UIB01_RS12620 PF00027 Cyclic nucleotide-binding domain UIB01_RS12620 PF00325 Bacterial regulatory proteins, crp family UIB01_RS12625 PF00156 Phosphoribosyl transferase domain UIB01_RS12630 PF02630 SCO1/SenC UIB01_RS12640 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS12645 PF00005 ABC transporter UIB01_RS12655 PF02132 RecR protein UIB01_RS12655 PF13662 Toprim domain UIB01_RS12660 PF02575 YbaB/EbfC DNA-binding family UIB01_RS12665 PF12169 DNA polymerase III subunits gamma and tau domain III UIB01_RS12665 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding UIB01_RS12665 PF12170 DNA polymerase III tau subunit V interacting with alpha UIB01_RS12670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UIB01_RS12670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UIB01_RS12670 PF11890 Domain of unknown function (DUF3410) UIB01_RS12675 PF01554 MatE UIB01_RS12700 PF07992 Pyridine nucleotide-disulphide oxidoreductase UIB01_RS12700 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UIB01_RS12710 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term UIB01_RS12710 PF12833 Helix-turn-helix domain UIB01_RS12720 PF02322 Cytochrome bd terminal oxidase subunit II UIB01_RS12725 PF01654 Cytochrome bd terminal oxidase subunit I UIB01_RS12730 PF16485 Protealysin propeptide UIB01_RS12730 PF02868 Thermolysin metallopeptidase, alpha-helical domain UIB01_RS12730 PF01447 Thermolysin metallopeptidase, catalytic domain UIB01_RS12740 PF00563 EAL domain UIB01_RS12740 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS12740 PF03707 Bacterial signalling protein N terminal repeat UIB01_RS12750 PF03358 NADPH-dependent FMN reductase UIB01_RS12755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS12755 PF03466 LysR substrate binding domain UIB01_RS12760 PF01212 Beta-eliminating lyase UIB01_RS12770 PF00578 AhpC/TSA family UIB01_RS12770 PF10417 C-terminal domain of 1-Cys peroxiredoxin UIB01_RS12780 PF10055 Uncharacterized small protein (DUF2292) UIB01_RS12790 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS12795 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS12800 PF00005 ABC transporter UIB01_RS12800 PF12857 TOBE-like domain UIB01_RS12820 PF00263 Bacterial type II and III secretion system protein UIB01_RS12820 PF03958 Bacterial type II/III secretion system short domain UIB01_RS12825 PF01053 Cys/Met metabolism PLP-dependent enzyme UIB01_RS12830 PF00156 Phosphoribosyl transferase domain UIB01_RS12835 PF02674 Colicin V production protein UIB01_RS12840 PF05036 Sporulation related domain UIB01_RS12845 PF02875 Mur ligase family, glutamate ligase domain UIB01_RS12845 PF08245 Mur ligase middle domain UIB01_RS12850 PF01039 Carboxyl transferase domain UIB01_RS12850 PF17848 Acetyl-coA carboxylase zinc finger domain UIB01_RS12855 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase UIB01_RS12860 PF01416 tRNA pseudouridine synthase UIB01_RS12870 PF01118 Semialdehyde dehydrogenase, NAD binding domain UIB01_RS12870 PF02774 Semialdehyde dehydrogenase, dimerisation domain UIB01_RS12875 PF02774 Semialdehyde dehydrogenase, dimerisation domain UIB01_RS12875 PF01118 Semialdehyde dehydrogenase, NAD binding domain UIB01_RS12880 PF00180 Isocitrate/isopropylmalate dehydrogenase UIB01_RS12885 PF00694 Aconitase C-terminal domain UIB01_RS12890 PF00330 Aconitase family (aconitate hydratase) UIB01_RS12895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS12900 PF00011 Hsp20/alpha crystallin family UIB01_RS12910 PF01207 Dihydrouridine synthase (Dus) UIB01_RS12935 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UIB01_RS12945 PF00535 Glycosyl transferase family 2 UIB01_RS12950 PF13614 AAA domain UIB01_RS12950 PF13807 G-rich domain on putative tyrosine kinase UIB01_RS12950 PF02706 Chain length determinant protein UIB01_RS12960 PF02357 Transcription termination factor nusG UIB01_RS12965 PF00534 Glycosyl transferases group 1 UIB01_RS12965 PF13439 Glycosyltransferase Family 4 UIB01_RS12980 PF13439 Glycosyltransferase Family 4 UIB01_RS12980 PF00534 Glycosyl transferases group 1 UIB01_RS12990 PF13439 Glycosyltransferase Family 4 UIB01_RS12990 PF00534 Glycosyl transferases group 1 UIB01_RS13025 PF02899 Phage integrase, N-terminal SAM-like domain UIB01_RS13025 PF00589 Phage integrase family UIB01_RS13045 PF04055 Radical SAM superfamily UIB01_RS13045 PF00919 Uncharacterized protein family UPF0004 UIB01_RS13045 PF18693 TRAM domain UIB01_RS13050 PF05199 GMC oxidoreductase UIB01_RS13050 PF00732 GMC oxidoreductase UIB01_RS13055 PF00171 Aldehyde dehydrogenase family UIB01_RS13060 PF02028 BCCT, betaine/carnitine/choline family transporter UIB01_RS13065 PF00291 Pyridoxal-phosphate dependent enzyme UIB01_RS13070 PF18389 TrmO C-terminal domain UIB01_RS13070 PF01980 tRNA-methyltransferase O UIB01_RS13075 PF01804 Penicillin amidase UIB01_RS13095 PF01048 Phosphorylase superfamily UIB01_RS13100 PF00933 Glycosyl hydrolase family 3 N terminal domain UIB01_RS13110 PF00440 Bacterial regulatory proteins, tetR family UIB01_RS13115 PF01726 LexA DNA binding domain UIB01_RS13115 PF00717 Peptidase S24-like UIB01_RS13120 PF03846 Cell division inhibitor SulA UIB01_RS13130 PF00892 EamA-like transporter family UIB01_RS13140 PF08272 Topoisomerase I zinc-ribbon-like UIB01_RS13140 PF01131 DNA topoisomerase UIB01_RS13140 PF01751 Toprim domain UIB01_RS13140 PF01396 Topoisomerase DNA binding C4 zinc finger UIB01_RS13150 PF02803 Thiolase, C-terminal domain UIB01_RS13150 PF00108 Thiolase, N-terminal domain UIB01_RS13155 PF00378 Enoyl-CoA hydratase/isomerase UIB01_RS13155 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UIB01_RS13155 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UIB01_RS13160 PF00326 Prolyl oligopeptidase family UIB01_RS13160 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain UIB01_RS13170 PF13193 AMP-binding enzyme C-terminal domain UIB01_RS13170 PF16177 Acetyl-coenzyme A synthetase N-terminus UIB01_RS13170 PF00501 AMP-binding enzyme UIB01_RS13175 PF03480 Bacterial extracellular solute-binding protein, family 7 UIB01_RS13180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS13180 PF03466 LysR substrate binding domain UIB01_RS13185 PF02515 CoA-transferase family III UIB01_RS13190 PF00682 HMGL-like UIB01_RS13195 PF00561 alpha/beta hydrolase fold UIB01_RS13200 PF03480 Bacterial extracellular solute-binding protein, family 7 UIB01_RS13205 PF03328 HpcH/HpaI aldolase/citrate lyase family UIB01_RS13210 PF02515 CoA-transferase family III UIB01_RS13215 PF03972 MmgE/PrpD family UIB01_RS13220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UIB01_RS13225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UIB01_RS13225 PF02770 Acyl-CoA dehydrogenase, middle domain UIB01_RS13225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UIB01_RS13235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS13235 PF03466 LysR substrate binding domain UIB01_RS13240 PF10011 Predicted membrane protein (DUF2254) UIB01_RS13250 PF00472 RF-1 domain UIB01_RS13260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS13260 PF00672 HAMP domain UIB01_RS13260 PF16591 Helical bimodular sensor domain UIB01_RS13265 PF00005 ABC transporter UIB01_RS13265 PF00664 ABC transporter transmembrane region UIB01_RS13275 PF00581 Rhodanese-like domain UIB01_RS13275 PF17773 UPF0176 acylphosphatase like domain UIB01_RS13280 PF01722 BolA-like protein UIB01_RS13290 PF10415 Fumarase C C-terminus UIB01_RS13290 PF00206 Lyase UIB01_RS13325 PF03573 outer membrane porin, OprD family UIB01_RS13330 PF03594 Benzoate membrane transport protein UIB01_RS13335 PF00775 Dioxygenase UIB01_RS13335 PF04444 Catechol dioxygenase N terminus UIB01_RS13340 PF02426 Muconolactone delta-isomerase UIB01_RS13345 PF13378 Enolase C-terminal domain-like UIB01_RS13345 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain UIB01_RS13355 PF00106 short chain dehydrogenase UIB01_RS13360 PF00175 Oxidoreductase NAD-binding domain UIB01_RS13360 PF00111 2Fe-2S iron-sulfur cluster binding domain UIB01_RS13360 PF00970 Oxidoreductase FAD-binding domain UIB01_RS13365 PF00866 Ring hydroxylating beta subunit UIB01_RS13370 PF00355 Rieske [2Fe-2S] domain UIB01_RS13370 PF00848 Ring hydroxylating alpha subunit (catalytic domain) UIB01_RS13375 PF14525 AraC-binding-like domain UIB01_RS13375 PF12833 Helix-turn-helix domain UIB01_RS13380 PF01207 Dihydrouridine synthase (Dus) UIB01_RS13385 PF00923 Transaldolase/Fructose-6-phosphate aldolase UIB01_RS13395 PF00072 Response regulator receiver domain UIB01_RS13405 PF04333 MlaA lipoprotein UIB01_RS13415 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term UIB01_RS13415 PF14489 QueF-like protein UIB01_RS13420 PF01061 ABC-2 type transporter UIB01_RS13425 PF00005 ABC transporter UIB01_RS13430 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family UIB01_RS13440 PF00202 Aminotransferase class-III UIB01_RS13450 PF11871 Domain of unknown function (DUF3391) UIB01_RS13450 PF01966 HD domain UIB01_RS13470 PF00581 Rhodanese-like domain UIB01_RS13475 PF00924 Mechanosensitive ion channel UIB01_RS13480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UIB01_RS13480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UIB01_RS13480 PF02770 Acyl-CoA dehydrogenase, middle domain UIB01_RS13480 PF09317 Domain of unknown function (DUF1974) UIB01_RS13485 PF00672 HAMP domain UIB01_RS13485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS13485 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS13490 PF00486 Transcriptional regulatory protein, C terminal UIB01_RS13490 PF00072 Response regulator receiver domain UIB01_RS13495 PF03477 ATP cone domain UIB01_RS13495 PF00317 Ribonucleotide reductase, all-alpha domain UIB01_RS13495 PF02867 Ribonucleotide reductase, barrel domain UIB01_RS13525 PF00268 Ribonucleotide reductase, small chain UIB01_RS13530 PF13936 Helix-turn-helix domain UIB01_RS13530 PF00665 Integrase core domain UIB01_RS13545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS13545 PF03466 LysR substrate binding domain UIB01_RS13550 PF02525 Flavodoxin-like fold UIB01_RS13555 PF04993 TfoX N-terminal domain UIB01_RS13565 PF13649 Methyltransferase domain UIB01_RS13580 PF01695 IstB-like ATP binding protein UIB01_RS13585 PF00665 Integrase core domain UIB01_RS13595 PF13426 PAS domain UIB01_RS13595 PF08447 PAS fold UIB01_RS13595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS13600 PF02525 Flavodoxin-like fold UIB01_RS13605 PF03466 LysR substrate binding domain UIB01_RS13605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS13610 PF01638 HxlR-like helix-turn-helix UIB01_RS13635 PF13411 MerR HTH family regulatory protein UIB01_RS13660 PF06165 Glycosyltransferase family 36 UIB01_RS13660 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain UIB01_RS13660 PF10091 Putative glucoamylase UIB01_RS13665 PF12392 Collagenase UIB01_RS13665 PF01136 Peptidase family U32 UIB01_RS13675 PF07690 Major Facilitator Superfamily UIB01_RS13690 PF00034 Cytochrome c UIB01_RS13690 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UIB01_RS13695 PF01593 Flavin containing amine oxidoreductase UIB01_RS13710 PF07885 Ion channel UIB01_RS13720 PF03880 DbpA RNA binding domain UIB01_RS13720 PF00271 Helicase conserved C-terminal domain UIB01_RS13720 PF00270 DEAD/DEAH box helicase UIB01_RS13730 PF00230 Major intrinsic protein UIB01_RS13735 PF02782 FGGY family of carbohydrate kinases, C-terminal domain UIB01_RS13735 PF00370 FGGY family of carbohydrate kinases, N-terminal domain UIB01_RS13740 PF00455 DeoR C terminal sensor domain UIB01_RS13740 PF08220 DeoR-like helix-turn-helix domain UIB01_RS13745 PF01266 FAD dependent oxidoreductase UIB01_RS13745 PF16901 C-terminal domain of alpha-glycerophosphate oxidase UIB01_RS13760 PF05698 Bacterial trigger factor protein (TF) C-terminus UIB01_RS13765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS13765 PF00672 HAMP domain UIB01_RS13790 PF00459 Inositol monophosphatase family UIB01_RS13805 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UIB01_RS13810 PF00909 Ammonium Transporter Family UIB01_RS13815 PF13286 Phosphohydrolase-associated domain UIB01_RS13815 PF01966 HD domain UIB01_RS13825 PF03473 MOSC domain UIB01_RS13825 PF03475 3-alpha domain UIB01_RS13830 PF00892 EamA-like transporter family UIB01_RS13835 PF01709 Transcriptional regulator UIB01_RS13840 PF01844 HNH endonuclease UIB01_RS13845 PF00582 Universal stress protein family UIB01_RS13870 PF00474 Sodium:solute symporter family UIB01_RS13875 PF00293 NUDIX domain UIB01_RS13880 PF04542 Sigma-70 region 2 UIB01_RS13880 PF00140 Sigma-70 factor, region 1.2 UIB01_RS13880 PF04539 Sigma-70 region 3 UIB01_RS13880 PF04545 Sigma-70, region 4 UIB01_RS13900 PF01975 Survival protein SurE UIB01_RS13905 PF01142 tRNA pseudouridine synthase D (TruD) UIB01_RS13910 PF02542 YgbB family UIB01_RS13920 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UIB01_RS13925 PF00756 Putative esterase UIB01_RS13930 PF00107 Zinc-binding dehydrogenase UIB01_RS13930 PF08240 Alcohol dehydrogenase GroES-like domain UIB01_RS13935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS13935 PF03466 LysR substrate binding domain UIB01_RS13950 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase UIB01_RS13955 PF04977 Septum formation initiator UIB01_RS13960 PF03952 Enolase, N-terminal domain UIB01_RS13960 PF00113 Enolase, C-terminal TIM barrel domain UIB01_RS13965 PF00793 DAHP synthetase I family UIB01_RS13970 PF00117 Glutamine amidotransferase class-I UIB01_RS13970 PF06418 CTP synthase N-terminus UIB01_RS13975 PF01171 PP-loop family UIB01_RS13975 PF11734 TilS substrate C-terminal domain UIB01_RS13975 PF09179 TilS substrate binding domain UIB01_RS13980 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit UIB01_RS13985 PF07733 Bacterial DNA polymerase III alpha NTPase domain UIB01_RS13985 PF17657 Bacterial DNA polymerase III alpha subunit finger domain UIB01_RS13985 PF14579 Helix-hairpin-helix motif UIB01_RS13985 PF01336 OB-fold nucleic acid binding domain UIB01_RS13985 PF02811 PHP domain UIB01_RS13990 PF01351 Ribonuclease HII UIB01_RS13995 PF02684 Lipid-A-disaccharide synthetase UIB01_RS14000 PF00132 Bacterial transferase hexapeptide (six repeats) UIB01_RS14000 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 UIB01_RS14005 PF07977 FabA-like domain UIB01_RS14010 PF00132 Bacterial transferase hexapeptide (six repeats) UIB01_RS14010 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD UIB01_RS14015 PF03938 Outer membrane protein (OmpH-like) UIB01_RS14020 PF07244 Surface antigen variable number repeat UIB01_RS14020 PF01103 Surface antigen UIB01_RS14025 PF02163 Peptidase family M50 UIB01_RS14025 PF17820 PDZ domain UIB01_RS14025 PF13180 PDZ domain UIB01_RS14030 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain UIB01_RS14030 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase UIB01_RS14030 PF13288 DXP reductoisomerase C-terminal domain UIB01_RS14040 PF01255 Putative undecaprenyl diphosphate synthase UIB01_RS14045 PF01765 Ribosome recycling factor UIB01_RS14050 PF00696 Amino acid kinase family UIB01_RS14055 PF00889 Elongation factor TS UIB01_RS14060 PF00318 Ribosomal protein S2 UIB01_RS14065 PF00557 Metallopeptidase family M24 UIB01_RS14070 PF08335 GlnD PII-uridylyltransferase UIB01_RS14070 PF01966 HD domain UIB01_RS14070 PF01909 Nucleotidyltransferase domain UIB01_RS14070 PF01842 ACT domain UIB01_RS14075 PF03334 Na+/H+ antiporter subunit UIB01_RS14080 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) UIB01_RS14085 PF01899 Na+/H+ ion antiporter subunit UIB01_RS14090 PF00361 Proton-conducting membrane transporter UIB01_RS14095 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L UIB01_RS14100 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus UIB01_RS14100 PF13244 Domain of unknown function (DUF4040) UIB01_RS14100 PF00361 Proton-conducting membrane transporter UIB01_RS14100 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter UIB01_RS14115 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region UIB01_RS14115 PF01243 Pyridoxamine 5'-phosphate oxidase UIB01_RS14120 PF04972 BON domain UIB01_RS14120 PF00691 OmpA family UIB01_RS14125 PF00144 Beta-lactamase UIB01_RS14130 PF13307 Helicase C-terminal domain UIB01_RS14130 PF06733 DEAD_2 UIB01_RS14150 PF02810 SEC-C motif UIB01_RS14155 PF00175 Oxidoreductase NAD-binding domain UIB01_RS14155 PF00970 Oxidoreductase FAD-binding domain UIB01_RS14160 PF03466 LysR substrate binding domain UIB01_RS14160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS14165 PF00072 Response regulator receiver domain UIB01_RS14165 PF00196 Bacterial regulatory proteins, luxR family UIB01_RS14170 PF00892 EamA-like transporter family UIB01_RS14175 PF03942 DTW domain UIB01_RS14185 PF09364 XFP N-terminal domain UIB01_RS14185 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase UIB01_RS14185 PF09363 XFP C-terminal domain UIB01_RS14190 PF10996 Beta-Casp domain UIB01_RS14190 PF00753 Metallo-beta-lactamase superfamily UIB01_RS14190 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain UIB01_RS14200 PF02631 RecX family UIB01_RS14205 PF00154 recA bacterial DNA recombination protein UIB01_RS14210 PF02464 Competence-damaged protein UIB01_RS14220 PF01624 MutS domain I UIB01_RS14220 PF05188 MutS domain II UIB01_RS14220 PF05192 MutS domain III UIB01_RS14220 PF00488 MutS domain V UIB01_RS14220 PF05190 MutS family domain IV UIB01_RS14225 PF00037 4Fe-4S binding domain UIB01_RS14225 PF11953 Domain of unknown function (DUF3470) UIB01_RS14245 PF13439 Glycosyltransferase Family 4 UIB01_RS14245 PF00534 Glycosyl transferases group 1 UIB01_RS14250 PF03631 Virulence factor BrkB UIB01_RS14260 PF00563 EAL domain UIB01_RS14260 PF03707 Bacterial signalling protein N terminal repeat UIB01_RS14260 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS14265 PF01339 CheB methylesterase UIB01_RS14265 PF00072 Response regulator receiver domain UIB01_RS14270 PF03705 CheR methyltransferase, all-alpha domain UIB01_RS14270 PF01739 CheR methyltransferase, SAM binding domain UIB01_RS14275 PF01584 CheW-like domain UIB01_RS14280 PF00672 HAMP domain UIB01_RS14280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS14280 PF17202 Single cache domain 3 UIB01_RS14285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS14285 PF02895 Signal transducing histidine kinase, homodimeric domain UIB01_RS14285 PF01627 Hpt domain UIB01_RS14285 PF01584 CheW-like domain UIB01_RS14285 PF09078 CheY binding UIB01_RS14295 PF00072 Response regulator receiver domain UIB01_RS14305 PF00196 Bacterial regulatory proteins, luxR family UIB01_RS14305 PF00072 Response regulator receiver domain UIB01_RS14310 PF10431 C-terminal, D2-small domain, of ClpB protein UIB01_RS14310 PF07724 AAA domain (Cdc48 subfamily) UIB01_RS14315 PF00795 Carbon-nitrogen hydrolase UIB01_RS14320 PF09723 Zinc ribbon domain UIB01_RS14325 PF03069 Acetamidase/Formamidase family UIB01_RS14330 PF00005 ABC transporter UIB01_RS14335 PF00005 ABC transporter UIB01_RS14335 PF08402 TOBE domain UIB01_RS14345 PF02653 Branched-chain amino acid transport system / permease component UIB01_RS14345 PF11862 Domain of unknown function (DUF3382) UIB01_RS14355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS14355 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS14355 PF00072 Response regulator receiver domain UIB01_RS14355 PF18415 Histidine kinase receptor ArcB trans-membrane domain UIB01_RS14355 PF01627 Hpt domain UIB01_RS14355 PF00989 PAS fold UIB01_RS14360 PF00072 Response regulator receiver domain UIB01_RS14370 PF03062 MBOAT, membrane-bound O-acyltransferase family UIB01_RS14380 PF00550 Phosphopantetheine attachment site UIB01_RS14395 PF01590 GAF domain UIB01_RS14395 PF02954 Bacterial regulatory protein, Fis family UIB01_RS14395 PF00158 Sigma-54 interaction domain UIB01_RS14405 PF00072 Response regulator receiver domain UIB01_RS14405 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS14410 PF00593 TonB dependent receptor UIB01_RS14410 PF07715 TonB-dependent Receptor Plug Domain UIB01_RS14415 PF12833 Helix-turn-helix domain UIB01_RS14415 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term UIB01_RS14425 PF11769 Protein of unknown function (DUF3313) UIB01_RS14440 PF01734 Patatin-like phospholipase UIB01_RS14460 PF00665 Integrase core domain UIB01_RS14460 PF13936 Helix-turn-helix domain UIB01_RS14500 PF00150 Cellulase (glycosyl hydrolase family 5) UIB01_RS14515 PF13509 S1 domain UIB01_RS14515 PF17783 CvfB-like winged helix domain UIB01_RS14520 PF01011 PQQ enzyme repeat UIB01_RS14525 PF07995 Glucose / Sorbosone dehydrogenase UIB01_RS14560 PF08494 DEAD/H associated UIB01_RS14560 PF00271 Helicase conserved C-terminal domain UIB01_RS14560 PF00270 DEAD/DEAH box helicase UIB01_RS14570 PF00106 short chain dehydrogenase UIB01_RS14580 PF12867 DinB superfamily UIB01_RS14580 PF03781 Sulfatase-modifying factor enzyme 1 UIB01_RS14590 PF01483 Proprotein convertase P-domain UIB01_RS14590 PF00082 Subtilase family UIB01_RS14600 PF13537 Glutamine amidotransferase domain UIB01_RS14600 PF00733 Asparagine synthase UIB01_RS14605 PF08443 RimK-like ATP-grasp domain UIB01_RS14605 PF08245 Mur ligase middle domain UIB01_RS14605 PF02875 Mur ligase family, glutamate ligase domain UIB01_RS14610 PF05343 M42 glutamyl aminopeptidase UIB01_RS14615 PF00672 HAMP domain UIB01_RS14615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS14615 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) UIB01_RS14615 PF00072 Response regulator receiver domain UIB01_RS14615 PF01627 Hpt domain UIB01_RS14615 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS14620 PF06794 Uncharacterised protein family (UPF0270) UIB01_RS14635 PF00106 short chain dehydrogenase UIB01_RS14635 PF00561 alpha/beta hydrolase fold UIB01_RS14640 PF00474 Sodium:solute symporter family UIB01_RS14645 PF04341 Protein of unknown function, DUF485 UIB01_RS14660 PF04333 MlaA lipoprotein UIB01_RS14665 PF05726 Pirin C-terminal cupin domain UIB01_RS14665 PF02678 Pirin UIB01_RS14670 PF03279 Bacterial lipid A biosynthesis acyltransferase UIB01_RS14675 PF05209 Septum formation inhibitor MinC, N-terminal domain UIB01_RS14675 PF03775 Septum formation inhibitor MinC, C-terminal domain UIB01_RS14680 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain UIB01_RS14685 PF03776 Septum formation topological specificity factor MinE UIB01_RS14690 PF00849 RNA pseudouridylate synthase UIB01_RS14695 PF02127 Aminopeptidase I zinc metalloprotease (M18) UIB01_RS14700 PF14765 Polyketide synthase dehydratase UIB01_RS14700 PF08659 KR domain UIB01_RS14700 PF00698 Acyl transferase domain UIB01_RS14700 PF08240 Alcohol dehydrogenase GroES-like domain UIB01_RS14700 PF08990 Erythronolide synthase docking UIB01_RS14700 PF09277 Erythronolide synthase, docking UIB01_RS14700 PF16197 Ketoacyl-synthetase C-terminal extension UIB01_RS14700 PF00109 Beta-ketoacyl synthase, N-terminal domain UIB01_RS14700 PF02801 Beta-ketoacyl synthase, C-terminal domain UIB01_RS14700 PF00550 Phosphopantetheine attachment site UIB01_RS14705 PF03572 Peptidase family S41 UIB01_RS14705 PF11818 C-terminal domain of tail specific protease (DUF3340) UIB01_RS14705 PF00595 PDZ domain UIB01_RS14705 PF17804 Tail specific protease N-terminal domain UIB01_RS14710 PF05231 MASE1 UIB01_RS14710 PF00563 EAL domain UIB01_RS14740 PF00460 Flagella basal body rod protein UIB01_RS14740 PF00700 Bacterial flagellin C-terminal helical region UIB01_RS14740 PF00669 Bacterial flagellin N-terminal helical region UIB01_RS14745 PF00460 Flagella basal body rod protein UIB01_RS14745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UIB01_RS14750 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase UIB01_RS14750 PF10135 Rod binding protein UIB01_RS14755 PF02119 Flagellar P-ring protein UIB01_RS14760 PF02107 Flagellar L-ring protein UIB01_RS14765 PF00460 Flagella basal body rod protein UIB01_RS14765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UIB01_RS14770 PF00460 Flagella basal body rod protein UIB01_RS14770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UIB01_RS14775 PF07559 Flagellar basal body protein FlaE UIB01_RS14775 PF00460 Flagella basal body rod protein UIB01_RS14775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UIB01_RS14780 PF13860 FlgD Ig-like domain UIB01_RS14780 PF03963 Flagellar hook capping protein - N-terminal region UIB01_RS14780 PF13861 FlgD Tudor-like domain UIB01_RS14785 PF00460 Flagella basal body rod protein UIB01_RS14785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UIB01_RS14790 PF00460 Flagella basal body rod protein UIB01_RS14795 PF01739 CheR methyltransferase, SAM binding domain UIB01_RS14795 PF03705 CheR methyltransferase, all-alpha domain UIB01_RS14800 PF00072 Response regulator receiver domain UIB01_RS14800 PF01584 CheW-like domain UIB01_RS14820 PF07317 Flagellar regulator YcgR UIB01_RS14820 PF07238 PilZ domain UIB01_RS14840 PF03869 Arc-like DNA binding domain UIB01_RS14845 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit UIB01_RS14850 PF00364 Biotin-requiring enzyme UIB01_RS14850 PF00682 HMGL-like UIB01_RS14850 PF02436 Conserved carboxylase domain UIB01_RS14855 PF04277 Oxaloacetate decarboxylase, gamma chain UIB01_RS14860 PF00571 CBS domain UIB01_RS14860 PF01769 Divalent cation transporter UIB01_RS14860 PF03448 MgtE intracellular N domain UIB01_RS14885 PF02599 Global regulator protein family UIB01_RS14890 PF13840 ACT domain UIB01_RS14890 PF01842 ACT domain UIB01_RS14890 PF00696 Amino acid kinase family UIB01_RS14895 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UIB01_RS14895 PF01411 tRNA synthetases class II (A) UIB01_RS14895 PF02272 DHHA1 domain UIB01_RS14900 PF01212 Beta-eliminating lyase UIB01_RS14910 PF03692 Putative zinc- or iron-chelating domain UIB01_RS14920 PF05166 YcgL domain UIB01_RS14925 PF01612 3'-5' exonuclease UIB01_RS14925 PF00570 HRDC domain UIB01_RS14930 PF00581 Rhodanese-like domain UIB01_RS14935 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) UIB01_RS14940 PF00255 Glutathione peroxidase UIB01_RS14950 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS14955 PF00005 ABC transporter UIB01_RS14955 PF03459 TOBE domain UIB01_RS14960 PF01042 Endoribonuclease L-PSP UIB01_RS14965 PF03466 LysR substrate binding domain UIB01_RS14965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS14970 PF02654 Cobalamin-5-phosphate synthase UIB01_RS14980 PF02277 Phosphoribosyltransferase UIB01_RS14985 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase UIB01_RS14990 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain UIB01_RS14990 PF07685 CobB/CobQ-like glutamine amidotransferase domain UIB01_RS14995 PF00155 Aminotransferase class I and II UIB01_RS15000 PF17113 Regulatory signalling modulator protein AmpE UIB01_RS15000 PF03186 CobD/Cbib protein UIB01_RS15010 PF00881 Nitroreductase family UIB01_RS15015 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain UIB01_RS15015 PF07685 CobB/CobQ-like glutamine amidotransferase domain UIB01_RS15020 PF12557 Cob(I)alamin adenosyltransferase N terminal UIB01_RS15020 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP UIB01_RS15030 PF07715 TonB-dependent Receptor Plug Domain UIB01_RS15030 PF00593 TonB dependent receptor UIB01_RS15040 PF03600 Citrate transporter UIB01_RS15045 PF00877 NlpC/P60 family UIB01_RS15050 PF00877 NlpC/P60 family UIB01_RS15080 PF02322 Cytochrome bd terminal oxidase subunit II UIB01_RS15085 PF01654 Cytochrome bd terminal oxidase subunit I UIB01_RS15110 PF00793 DAHP synthetase I family UIB01_RS15115 PF01171 PP-loop family UIB01_RS15125 PF04893 Yip1 domain UIB01_RS15135 PF10263 SprT-like family UIB01_RS15135 PF17283 SprT-like zinc ribbon domain UIB01_RS15140 PF07690 Major Facilitator Superfamily UIB01_RS15145 PF06796 Periplasmic nitrate reductase protein NapE UIB01_RS15155 PF00384 Molybdopterin oxidoreductase UIB01_RS15155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UIB01_RS15155 PF01568 Molydopterin dinucleotide binding domain UIB01_RS15160 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) UIB01_RS15165 PF03264 NapC/NirT cytochrome c family, N-terminal region UIB01_RS15170 PF00692 dUTPase UIB01_RS15175 PF00313 'Cold-shock' DNA-binding domain UIB01_RS15180 PF10609 NUBPL iron-transfer P-loop NTPase UIB01_RS15185 PF09334 tRNA synthetases class I (M) UIB01_RS15185 PF01588 Putative tRNA binding domain UIB01_RS15190 PF01479 S4 domain UIB01_RS15190 PF00849 RNA pseudouridylate synthase UIB01_RS15200 PF01757 Acyltransferase family UIB01_RS15210 PF00182 Chitinase class I UIB01_RS15305 PF01343 Peptidase family S49 UIB01_RS15355 PF01258 Prokaryotic dksA/traR C4-type zinc finger UIB01_RS15455 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system UIB01_RS15460 PF02899 Phage integrase, N-terminal SAM-like domain UIB01_RS15460 PF00589 Phage integrase family UIB01_RS15540 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH UIB01_RS15545 PF12146 Serine aminopeptidase, S33 UIB01_RS15550 PF02803 Thiolase, C-terminal domain UIB01_RS15550 PF00108 Thiolase, N-terminal domain UIB01_RS15555 PF01144 Coenzyme A transferase UIB01_RS15560 PF01144 Coenzyme A transferase UIB01_RS15565 PF09339 IclR helix-turn-helix domain UIB01_RS15565 PF01614 Bacterial transcriptional regulator UIB01_RS15575 PF00474 Sodium:solute symporter family UIB01_RS15580 PF07715 TonB-dependent Receptor Plug Domain UIB01_RS15580 PF00593 TonB dependent receptor UIB01_RS15590 PF00474 Sodium:solute symporter family UIB01_RS15595 PF01619 Proline dehydrogenase UIB01_RS15595 PF18327 Proline utilization A proline dehydrogenase N-terminal domain UIB01_RS15595 PF00171 Aldehyde dehydrogenase family UIB01_RS15595 PF14850 DNA-binding domain of Proline dehydrogenase UIB01_RS15600 PF12833 Helix-turn-helix domain UIB01_RS15605 PF00004 ATPase family associated with various cellular activities (AAA) UIB01_RS15605 PF05362 Lon protease (S16) C-terminal proteolytic domain UIB01_RS15605 PF02190 ATP-dependent protease La (LON) substrate-binding domain UIB01_RS15620 PF13649 Methyltransferase domain UIB01_RS15625 PF08003 Protein of unknown function (DUF1698) UIB01_RS15635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS15635 PF03466 LysR substrate binding domain UIB01_RS15645 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ UIB01_RS15650 PF02565 Recombination protein O C terminal UIB01_RS15650 PF11967 Recombination protein O N terminal UIB01_RS15655 PF07650 KH domain UIB01_RS15655 PF01926 50S ribosome-binding GTPase UIB01_RS15660 PF00035 Double-stranded RNA binding motif UIB01_RS15660 PF14622 Ribonuclease-III-like UIB01_RS15670 PF10502 Signal peptidase, peptidase S26 UIB01_RS15675 PF00679 Elongation factor G C-terminus UIB01_RS15675 PF00009 Elongation factor Tu GTP binding domain UIB01_RS15675 PF03144 Elongation factor Tu domain 2 UIB01_RS15675 PF06421 GTP-binding protein LepA C-terminus UIB01_RS15680 PF13180 PDZ domain UIB01_RS15690 PF17188 MucB/RseB C-terminal domain UIB01_RS15690 PF03888 MucB/RseB N-terminal domain UIB01_RS15695 PF03872 Anti sigma-E protein RseA, N-terminal domain UIB01_RS15695 PF03873 Anti sigma-E protein RseA, C-terminal domain UIB01_RS15700 PF04542 Sigma-70 region 2 UIB01_RS15700 PF08281 Sigma-70, region 4 UIB01_RS15705 PF00890 FAD binding domain UIB01_RS15705 PF02910 Fumarate reductase flavoprotein C-term UIB01_RS15710 PF03937 Flavinator of succinate dehydrogenase UIB01_RS15715 PF01571 Aminomethyltransferase folate-binding domain UIB01_RS15730 PF03167 Uracil DNA glycosylase superfamily UIB01_RS15735 PF13458 Periplasmic binding protein UIB01_RS15740 PF00378 Enoyl-CoA hydratase/isomerase UIB01_RS15755 PF02508 Rnf-Nqr subunit, membrane protein UIB01_RS15760 PF04060 Putative Fe-S cluster UIB01_RS15765 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit UIB01_RS15765 PF12838 4Fe-4S dicluster domain UIB01_RS15765 PF13375 RnfC Barrel sandwich hybrid domain UIB01_RS15765 PF10531 SLBB domain UIB01_RS15770 PF03116 NQR2, RnfD, RnfE family UIB01_RS15775 PF04205 FMN-binding domain UIB01_RS15780 PF02508 Rnf-Nqr subunit, membrane protein UIB01_RS15785 PF00633 Helix-hairpin-helix motif UIB01_RS15785 PF00730 HhH-GPD superfamily base excision DNA repair protein UIB01_RS15785 PF10576 Iron-sulfur binding domain of endonuclease III UIB01_RS15795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UIB01_RS15800 PF00764 Arginosuccinate synthase UIB01_RS15810 PF01979 Amidohydrolase family UIB01_RS15815 PF00929 Exonuclease UIB01_RS15820 PF14821 Threonine synthase N terminus UIB01_RS15820 PF00291 Pyridoxal-phosphate dependent enzyme UIB01_RS15825 PF00742 Homoserine dehydrogenase UIB01_RS15825 PF03447 Homoserine dehydrogenase, NAD binding domain UIB01_RS15825 PF01842 ACT domain UIB01_RS15830 PF04828 Glutathione-dependent formaldehyde-activating enzyme UIB01_RS15835 PF13098 Thioredoxin-like domain UIB01_RS15835 PF10411 Disulfide bond isomerase protein N-terminus UIB01_RS15840 PF02899 Phage integrase, N-terminal SAM-like domain UIB01_RS15840 PF00589 Phage integrase family UIB01_RS15845 PF01245 Ribosomal protein L19 UIB01_RS15850 PF01746 tRNA (Guanine-1)-methyltransferase UIB01_RS15855 PF05239 PRC-barrel domain UIB01_RS15855 PF01782 RimM N-terminal domain UIB01_RS15860 PF00886 Ribosomal protein S16 UIB01_RS15865 PF02881 SRP54-type protein, helical bundle domain UIB01_RS15865 PF02978 Signal peptide binding domain UIB01_RS15865 PF00448 SRP54-type protein, GTPase domain UIB01_RS15870 PF01578 Cytochrome C assembly protein UIB01_RS15875 PF00571 CBS domain UIB01_RS15875 PF03471 Transporter associated domain UIB01_RS15875 PF01595 Cyclin M transmembrane N-terminal domain UIB01_RS15880 PF02222 ATP-grasp domain UIB01_RS15880 PF01370 NAD dependent epimerase/dehydratase family UIB01_RS15890 PF00132 Bacterial transferase hexapeptide (six repeats) UIB01_RS15895 PF00293 NUDIX domain UIB01_RS15900 PF00293 NUDIX domain UIB01_RS15900 PF09297 NADH pyrophosphatase zinc ribbon domain UIB01_RS15905 PF03734 L,D-transpeptidase catalytic domain UIB01_RS15910 PF01784 NIF3 (NGG1p interacting factor 3) UIB01_RS15915 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain UIB01_RS15915 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal UIB01_RS15915 PF02769 AIR synthase related protein, C-terminal domain UIB01_RS15920 PF00005 ABC transporter UIB01_RS15925 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS15930 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS15935 PF00497 Bacterial extracellular solute-binding proteins, family 3 UIB01_RS15940 PF02230 Phospholipase/Carboxylesterase UIB01_RS15945 PF00270 DEAD/DEAH box helicase UIB01_RS15945 PF00271 Helicase conserved C-terminal domain UIB01_RS15950 PF02391 MoaE protein UIB01_RS15955 PF02597 ThiS family UIB01_RS15960 PF01967 MoaC family UIB01_RS15965 PF02562 PhoH-like protein UIB01_RS15965 PF13638 PIN domain UIB01_RS15970 PF01545 Cation efflux family UIB01_RS15970 PF16916 Dimerisation domain of Zinc Transporter UIB01_RS15975 PF03883 Peroxide stress protein YaaA UIB01_RS15980 PF01050 Mannose-6-phosphate isomerase UIB01_RS15980 PF00483 Nucleotidyl transferase UIB01_RS15990 PF05872 Bacterial protein of unknown function (DUF853) UIB01_RS16000 PF01842 ACT domain UIB01_RS16000 PF00551 Formyl transferase UIB01_RS16010 PF08411 Exonuclease C-terminal UIB01_RS16010 PF00929 Exonuclease UIB01_RS16035 PF17863 AAA lid domain UIB01_RS16035 PF07726 ATPase family associated with various cellular activities (AAA) UIB01_RS16060 PF00224 Pyruvate kinase, barrel domain UIB01_RS16060 PF02887 Pyruvate kinase, alpha/beta domain UIB01_RS16065 PF00970 Oxidoreductase FAD-binding domain UIB01_RS16065 PF00175 Oxidoreductase NAD-binding domain UIB01_RS16070 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS16075 PF05681 Fumarate hydratase (Fumerase) UIB01_RS16075 PF05683 Fumarase C-terminus UIB01_RS16080 PF09905 DNA-binding protein VF530 UIB01_RS16085 PF01965 DJ-1/PfpI family UIB01_RS16090 PF13091 PLD-like domain UIB01_RS16090 PF13396 Phospholipase_D-nuclease N-terminal UIB01_RS16110 PF04336 Acyl carrier protein phosphodiesterase UIB01_RS16115 PF00596 Class II Aldolase and Adducin N-terminal domain UIB01_RS16120 PF00258 Flavodoxin UIB01_RS16135 PF02152 Dihydroneopterin aldolase UIB01_RS16170 PF02653 Branched-chain amino acid transport system / permease component UIB01_RS16180 PF00005 ABC transporter UIB01_RS16185 PF12399 Branched-chain amino acid ATP-binding cassette transporter UIB01_RS16185 PF00005 ABC transporter UIB01_RS16190 PF03573 outer membrane porin, OprD family UIB01_RS16200 PF00501 AMP-binding enzyme UIB01_RS16200 PF13193 AMP-binding enzyme C-terminal domain UIB01_RS16205 PF03851 UV-endonuclease UvdE UIB01_RS16210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UIB01_RS16210 PF02770 Acyl-CoA dehydrogenase, middle domain UIB01_RS16210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UIB01_RS16215 PF01039 Carboxyl transferase domain UIB01_RS16220 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UIB01_RS16220 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UIB01_RS16220 PF00378 Enoyl-CoA hydratase/isomerase UIB01_RS16225 PF00289 Biotin carboxylase, N-terminal domain UIB01_RS16225 PF02785 Biotin carboxylase C-terminal domain UIB01_RS16225 PF00364 Biotin-requiring enzyme UIB01_RS16225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UIB01_RS16230 PF00682 HMGL-like UIB01_RS16235 PF01144 Coenzyme A transferase UIB01_RS16240 PF01144 Coenzyme A transferase UIB01_RS16245 PF00108 Thiolase, N-terminal domain UIB01_RS16245 PF02803 Thiolase, C-terminal domain UIB01_RS16250 PF13411 MerR HTH family regulatory protein UIB01_RS16255 PF03480 Bacterial extracellular solute-binding protein, family 7 UIB01_RS16265 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component UIB01_RS16270 PF00158 Sigma-54 interaction domain UIB01_RS16270 PF13185 GAF domain UIB01_RS16270 PF02954 Bacterial regulatory protein, Fis family UIB01_RS16280 PF07519 Tannase and feruloyl esterase UIB01_RS16285 PF03573 outer membrane porin, OprD family UIB01_RS16305 PF00892 EamA-like transporter family UIB01_RS16310 PF00484 Carbonic anhydrase UIB01_RS16315 PF00982 Glycosyltransferase family 20 UIB01_RS16320 PF02358 Trehalose-phosphatase UIB01_RS16330 PF00583 Acetyltransferase (GNAT) family UIB01_RS16340 PF00682 HMGL-like UIB01_RS16340 PF08502 LeuA allosteric (dimerisation) domain UIB01_RS16345 PF03435 Saccharopine dehydrogenase NADP binding domain UIB01_RS16345 PF16653 Saccharopine dehydrogenase C-terminal domain UIB01_RS16350 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain UIB01_RS16370 PF02470 MlaD protein UIB01_RS16375 PF04403 Paraquat-inducible protein A UIB01_RS16380 PF04403 Paraquat-inducible protein A UIB01_RS16415 PF01794 Ferric reductase like transmembrane component UIB01_RS16420 PF00174 Oxidoreductase molybdopterin binding domain UIB01_RS16425 PF01066 CDP-alcohol phosphatidyltransferase UIB01_RS16430 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain UIB01_RS16430 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain UIB01_RS16435 PF10369 Small subunit of acetolactate synthase UIB01_RS16440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UIB01_RS16440 PF00205 Thiamine pyrophosphate enzyme, central domain UIB01_RS16440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UIB01_RS16450 PF00849 RNA pseudouridylate synthase UIB01_RS16450 PF04287 tRNA pseudouridine synthase C UIB01_RS16460 PF14814 Bifunctional transglycosylase second domain UIB01_RS16460 PF00905 Penicillin binding protein transpeptidase domain UIB01_RS16460 PF00912 Transglycosylase UIB01_RS16490 PF00005 ABC transporter UIB01_RS16495 PF01032 FecCD transport family UIB01_RS16505 PF11412 Disulphide bond corrector protein DsbC UIB01_RS16505 PF02683 Cytochrome C biogenesis protein transmembrane region UIB01_RS16510 PF01220 Dehydroquinase class II UIB01_RS16515 PF00364 Biotin-requiring enzyme UIB01_RS16520 PF00289 Biotin carboxylase, N-terminal domain UIB01_RS16520 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UIB01_RS16520 PF02785 Biotin carboxylase C-terminal domain UIB01_RS16535 PF01207 Dihydrouridine synthase (Dus) UIB01_RS16540 PF02954 Bacterial regulatory protein, Fis family UIB01_RS16545 PF01808 AICARFT/IMPCHase bienzyme UIB01_RS16545 PF02142 MGS-like domain UIB01_RS16555 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain UIB01_RS16555 PF02843 Phosphoribosylglycinamide synthetase, C domain UIB01_RS16555 PF02844 Phosphoribosylglycinamide synthetase, N domain UIB01_RS16560 PF00672 HAMP domain UIB01_RS16560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS16560 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS16560 PF00072 Response regulator receiver domain UIB01_RS16560 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) UIB01_RS16560 PF01627 Hpt domain UIB01_RS16565 PF00067 Cytochrome P450 UIB01_RS16580 PF03547 Membrane transport protein UIB01_RS16585 PF04321 RmlD substrate binding domain UIB01_RS16590 PF03749 Sugar fermentation stimulation protein RE domain UIB01_RS16590 PF17746 SfsA N-terminal OB domain UIB01_RS16595 PF00155 Aminotransferase class I and II UIB01_RS16600 PF01258 Prokaryotic dksA/traR C4-type zinc finger UIB01_RS16605 PF00749 tRNA synthetases class I (E and Q), catalytic domain UIB01_RS16615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS16615 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS16615 PF00989 PAS fold UIB01_RS16615 PF08447 PAS fold UIB01_RS16620 PF00158 Sigma-54 interaction domain UIB01_RS16620 PF02954 Bacterial regulatory protein, Fis family UIB01_RS16620 PF00072 Response regulator receiver domain UIB01_RS16625 PF12626 Polymerase A arginine-rich C-terminus UIB01_RS16625 PF12627 Probable RNA and SrmB- binding site of polymerase A UIB01_RS16625 PF01743 Poly A polymerase head domain UIB01_RS16630 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) UIB01_RS16635 PF02548 Ketopantoate hydroxymethyltransferase UIB01_RS16640 PF02569 Pantoate-beta-alanine ligase UIB01_RS16645 PF02261 Aspartate decarboxylase UIB01_RS16650 PF00342 Phosphoglucose isomerase UIB01_RS16660 PF10672 S-adenosylmethionine-dependent methyltransferase UIB01_RS16660 PF17785 PUA-like domain UIB01_RS16680 PF04972 BON domain UIB01_RS16685 PF00575 S1 RNA binding domain UIB01_RS16685 PF03725 3' exoribonuclease family, domain 2 UIB01_RS16685 PF00013 KH domain UIB01_RS16685 PF01138 3' exoribonuclease family, domain 1 UIB01_RS16685 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain UIB01_RS16690 PF00312 Ribosomal protein S15 UIB01_RS16695 PF09157 Pseudouridine synthase II TruB, C-terminal UIB01_RS16695 PF16198 tRNA pseudouridylate synthase B C-terminal domain UIB01_RS16695 PF01509 TruB family pseudouridylate synthase (N terminal domain) UIB01_RS16700 PF02033 Ribosome-binding factor A UIB01_RS16705 PF04760 Translation initiation factor IF-2, N-terminal region UIB01_RS16705 PF08364 Bacterial translation initiation factor IF-2 associated region UIB01_RS16705 PF11987 Translation-initiation factor 2 UIB01_RS16705 PF00009 Elongation factor Tu GTP binding domain UIB01_RS16710 PF00575 S1 RNA binding domain UIB01_RS16710 PF08529 NusA N-terminal domain UIB01_RS16710 PF13184 NusA-like KH domain UIB01_RS16715 PF17384 RimP C-terminal SH3 domain UIB01_RS16715 PF02576 RimP N-terminal domain UIB01_RS16735 PF00121 Triosephosphate isomerase UIB01_RS16740 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III UIB01_RS16740 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II UIB01_RS16740 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain UIB01_RS16740 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I UIB01_RS16745 PF00809 Pterin binding enzyme UIB01_RS16750 PF17862 AAA+ lid domain UIB01_RS16750 PF06480 FtsH Extracellular UIB01_RS16750 PF01434 Peptidase family M41 UIB01_RS16750 PF00004 ATPase family associated with various cellular activities (AAA) UIB01_RS16755 PF01985 CRS1 / YhbY (CRM) domain UIB01_RS16765 PF01272 Transcription elongation factor, GreA/GreB, C-term UIB01_RS16765 PF03449 Transcription elongation factor, N-terminal UIB01_RS16770 PF02142 MGS-like domain UIB01_RS16770 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain UIB01_RS16770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UIB01_RS16775 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain UIB01_RS16775 PF00117 Glutamine amidotransferase class-I UIB01_RS16780 PF05173 Dihydrodipicolinate reductase, C-terminus UIB01_RS16780 PF01113 Dihydrodipicolinate reductase, N-terminus UIB01_RS16785 PF01556 DnaJ C terminal domain UIB01_RS16785 PF00684 DnaJ central domain UIB01_RS16785 PF00226 DnaJ domain UIB01_RS16790 PF00012 Hsp70 protein UIB01_RS16795 PF01025 GrpE UIB01_RS16800 PF02463 RecF/RecN/SMC N terminal domain UIB01_RS16805 PF01475 Ferric uptake regulator family UIB01_RS16810 PF04355 SmpA / OmlA family UIB01_RS16815 PF03658 RnfH family Ubiquitin UIB01_RS16820 PF03364 Polyketide cyclase / dehydrase and lipid transport UIB01_RS16825 PF01668 SmpB protein UIB01_RS16830 PF00392 Bacterial regulatory proteins, gntR family UIB01_RS16830 PF07729 FCD domain UIB01_RS16835 PF02652 L-lactate permease UIB01_RS16840 PF02754 Cysteine-rich domain UIB01_RS16845 PF02589 LUD domain UIB01_RS16845 PF13183 4Fe-4S dicluster domain UIB01_RS16845 PF11870 Domain of unknown function (DUF3390) UIB01_RS16850 PF02589 LUD domain UIB01_RS16890 PF00717 Peptidase S24-like UIB01_RS16895 PF02586 SOS response associated peptidase (SRAP) UIB01_RS16940 PF00403 Heavy-metal-associated domain UIB01_RS16945 PF13411 MerR HTH family regulatory protein UIB01_RS16950 PF04191 Phospholipid methyltransferase UIB01_RS16995 PF01252 Signal peptidase (SPase) II UIB01_RS17000 PF02311 AraC-like ligand binding domain UIB01_RS17000 PF12833 Helix-turn-helix domain UIB01_RS17010 PF07929 Plasmid pRiA4b ORF-3-like protein UIB01_RS17015 PF13817 IS66 C-terminal element UIB01_RS17015 PF13007 Transposase C of IS166 homeodomain UIB01_RS17015 PF13005 zinc-finger binding domain of transposase IS66 UIB01_RS17015 PF03050 Transposase IS66 family UIB01_RS17020 PF05717 IS66 Orf2 like protein UIB01_RS17035 PF00067 Cytochrome P450 UIB01_RS17045 PF11412 Disulphide bond corrector protein DsbC UIB01_RS17045 PF02683 Cytochrome C biogenesis protein transmembrane region UIB01_RS17050 PF05598 Transposase domain (DUF772) UIB01_RS17050 PF01609 Transposase DDE domain UIB01_RS17070 PF00795 Carbon-nitrogen hydrolase UIB01_RS17075 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS17075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS17075 PF00672 HAMP domain UIB01_RS17080 PF00486 Transcriptional regulatory protein, C terminal UIB01_RS17080 PF00072 Response regulator receiver domain UIB01_RS17085 PF03573 outer membrane porin, OprD family UIB01_RS17090 PF02321 Outer membrane efflux protein UIB01_RS17095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UIB01_RS17095 PF00529 HlyD membrane-fusion protein of T1SS UIB01_RS17100 PF00873 AcrB/AcrD/AcrF family UIB01_RS17110 PF01545 Cation efflux family UIB01_RS17110 PF16916 Dimerisation domain of Zinc Transporter UIB01_RS17120 PF09278 MerR, DNA binding UIB01_RS17120 PF00376 MerR family regulatory protein UIB01_RS17125 PF02411 MerT mercuric transport protein UIB01_RS17130 PF00403 Heavy-metal-associated domain UIB01_RS17140 PF01526 Tn3 transposase DDE domain UIB01_RS17140 PF13700 Domain of unknown function (DUF4158) UIB01_RS17175 PF13538 UvrD-like helicase C-terminal domain UIB01_RS17180 PF13361 UvrD-like helicase C-terminal domain UIB01_RS17180 PF00580 UvrD/REP helicase N-terminal domain UIB01_RS17180 PF12705 PD-(D/E)XK nuclease superfamily UIB01_RS17185 PF17946 RecC C-terminal domain UIB01_RS17225 PF01695 IstB-like ATP binding protein UIB01_RS17230 PF00665 Integrase core domain UIB01_RS17275 PF03099 Biotin/lipoate A/B protein ligase family UIB01_RS17275 PF00293 NUDIX domain UIB01_RS17280 PF01810 LysE type translocator UIB01_RS17285 PF00005 ABC transporter UIB01_RS17285 PF17912 MalK OB fold domain UIB01_RS17290 PF00128 Alpha amylase, catalytic domain UIB01_RS17295 PF14602 Hexapeptide repeat of succinyl-transferase UIB01_RS17295 PF12464 Maltose acetyltransferase UIB01_RS17300 PF00196 Bacterial regulatory proteins, luxR family UIB01_RS17300 PF17874 MalT-like TPR region UIB01_RS17305 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS17310 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS17310 PF14785 Maltose transport system permease protein MalF P2 domain UIB01_RS17315 PF01547 Bacterial extracellular solute-binding protein UIB01_RS17320 PF00128 Alpha amylase, catalytic domain UIB01_RS17330 PF00686 Starch binding domain UIB01_RS17330 PF00128 Alpha amylase, catalytic domain UIB01_RS17330 PF09081 Domain of unknown function (DUF1921) UIB01_RS17335 PF02264 LamB porin UIB01_RS17340 PF07148 Maltose operon periplasmic protein precursor (MalM) UIB01_RS17345 PF00893 Small Multidrug Resistance protein UIB01_RS17350 PF00248 Aldo/keto reductase family UIB01_RS17355 PF00171 Aldehyde dehydrogenase family UIB01_RS17360 PF01081 KDPG and KHG aldolase UIB01_RS17365 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase UIB01_RS17370 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain UIB01_RS17370 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain UIB01_RS17375 PF01418 Helix-turn-helix domain, rpiR family UIB01_RS17375 PF01380 SIS domain UIB01_RS17380 PF02685 Glucokinase UIB01_RS17385 PF00920 Dehydratase family UIB01_RS17395 PF07690 Major Facilitator Superfamily UIB01_RS17400 PF10634 Fe2+ transport protein UIB01_RS17420 PF04055 Radical SAM superfamily UIB01_RS17430 PF00317 Ribonucleotide reductase, all-alpha domain UIB01_RS17430 PF02867 Ribonucleotide reductase, barrel domain UIB01_RS17430 PF03477 ATP cone domain UIB01_RS17440 PF08859 DGC domain UIB01_RS17445 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain UIB01_RS17445 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain UIB01_RS17450 PF00849 RNA pseudouridylate synthase UIB01_RS17480 PF00486 Transcriptional regulatory protein, C terminal UIB01_RS17480 PF00072 Response regulator receiver domain UIB01_RS17485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS17500 PF00149 Calcineurin-like phosphoesterase UIB01_RS17500 PF12320 Type 5 capsule protein repressor C-terminal domain UIB01_RS17510 PF07715 TonB-dependent Receptor Plug Domain UIB01_RS17510 PF00593 TonB dependent receptor UIB01_RS17515 PF01497 Periplasmic binding protein UIB01_RS17525 PF00925 GTP cyclohydrolase II UIB01_RS17535 PF04608 Phosphatidylglycerophosphatase A UIB01_RS17540 PF00586 AIR synthase related protein, N-terminal domain UIB01_RS17540 PF02769 AIR synthase related protein, C-terminal domain UIB01_RS17545 PF01029 NusB family UIB01_RS17550 PF00885 6,7-dimethyl-8-ribityllumazine synthase UIB01_RS17555 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase UIB01_RS17555 PF00925 GTP cyclohydrolase II UIB01_RS17560 PF00677 Lumazine binding domain UIB01_RS17565 PF01872 RibD C-terminal domain UIB01_RS17565 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UIB01_RS17570 PF03477 ATP cone domain UIB01_RS17590 PF01206 Sulfurtransferase TusA UIB01_RS17595 PF04143 Sulphur transport UIB01_RS17600 PF00085 Thioredoxin UIB01_RS17615 PF00005 ABC transporter UIB01_RS17635 PF03544 Gram-negative bacterial TonB protein C-terminal UIB01_RS17640 PF02472 Biopolymer transport protein ExbD/TolR UIB01_RS17645 PF01618 MotA/TolQ/ExbB proton channel family UIB01_RS17650 PF01618 MotA/TolQ/ExbB proton channel family UIB01_RS17660 PF03922 OmpW family UIB01_RS17665 PF16363 GDP-mannose 4,6 dehydratase UIB01_RS17675 PF00436 Single-strand binding protein family UIB01_RS17680 PF07690 Major Facilitator Superfamily UIB01_RS17685 PF17755 UvrA DNA-binding domain UIB01_RS17685 PF17760 UvrA interaction domain UIB01_RS17695 PF00199 Catalase UIB01_RS17695 PF06628 Catalase-related immune-responsive UIB01_RS17700 PF01196 Ribosomal protein L17 UIB01_RS17705 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain UIB01_RS17705 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain UIB01_RS17705 PF01000 RNA polymerase Rpb3/RpoA insert domain UIB01_RS17710 PF00163 Ribosomal protein S4/S9 N-terminal domain UIB01_RS17710 PF01479 S4 domain UIB01_RS17715 PF00411 Ribosomal protein S11 UIB01_RS17720 PF00416 Ribosomal protein S13/S18 UIB01_RS17725 PF00444 Ribosomal protein L36 UIB01_RS17730 PF00344 SecY translocase UIB01_RS17735 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A UIB01_RS17740 PF00327 Ribosomal protein L30p/L7e UIB01_RS17745 PF00333 Ribosomal protein S5, N-terminal domain UIB01_RS17745 PF03719 Ribosomal protein S5, C-terminal domain UIB01_RS17750 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast UIB01_RS17755 PF00347 Ribosomal protein L6 UIB01_RS17760 PF00410 Ribosomal protein S8 UIB01_RS17765 PF00253 Ribosomal protein S14p/S29e UIB01_RS17770 PF00281 Ribosomal protein L5 UIB01_RS17770 PF00673 ribosomal L5P family C-terminus UIB01_RS17775 PF00467 KOW motif UIB01_RS17775 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 UIB01_RS17780 PF00238 Ribosomal protein L14p/L23e UIB01_RS17785 PF00366 Ribosomal protein S17 UIB01_RS17790 PF00831 Ribosomal L29 protein UIB01_RS17795 PF00252 Ribosomal protein L16p/L10e UIB01_RS17800 PF07650 KH domain UIB01_RS17800 PF00189 Ribosomal protein S3, C-terminal domain UIB01_RS17805 PF00237 Ribosomal protein L22p/L17e UIB01_RS17810 PF00203 Ribosomal protein S19 UIB01_RS17815 PF00181 Ribosomal Proteins L2, RNA binding domain UIB01_RS17815 PF03947 Ribosomal Proteins L2, C-terminal domain UIB01_RS17820 PF00276 Ribosomal protein L23 UIB01_RS17825 PF00573 Ribosomal protein L4/L1 family UIB01_RS17830 PF00297 Ribosomal protein L3 UIB01_RS17835 PF00338 Ribosomal protein S10p/S20e UIB01_RS17840 PF00009 Elongation factor Tu GTP binding domain UIB01_RS17840 PF03144 Elongation factor Tu domain 2 UIB01_RS17840 PF03143 Elongation factor Tu C-terminal domain UIB01_RS17845 PF00009 Elongation factor Tu GTP binding domain UIB01_RS17845 PF03764 Elongation factor G, domain IV UIB01_RS17845 PF03144 Elongation factor Tu domain 2 UIB01_RS17845 PF00679 Elongation factor G C-terminus UIB01_RS17845 PF14492 Elongation Factor G, domain II UIB01_RS17850 PF00177 Ribosomal protein S7p/S5e UIB01_RS17855 PF00164 Ribosomal protein S12/S23 UIB01_RS17860 PF04998 RNA polymerase Rpb1, domain 5 UIB01_RS17860 PF05000 RNA polymerase Rpb1, domain 4 UIB01_RS17860 PF04983 RNA polymerase Rpb1, domain 3 UIB01_RS17860 PF04997 RNA polymerase Rpb1, domain 1 UIB01_RS17860 PF00623 RNA polymerase Rpb1, domain 2 UIB01_RS17865 PF04560 RNA polymerase Rpb2, domain 7 UIB01_RS17865 PF04563 RNA polymerase beta subunit UIB01_RS17865 PF04561 RNA polymerase Rpb2, domain 2 UIB01_RS17865 PF04565 RNA polymerase Rpb2, domain 3 UIB01_RS17865 PF10385 RNA polymerase beta subunit external 1 domain UIB01_RS17865 PF00562 RNA polymerase Rpb2, domain 6 UIB01_RS17870 PF16320 Ribosomal protein L7/L12 dimerisation domain UIB01_RS17870 PF00542 Ribosomal protein L7/L12 C-terminal domain UIB01_RS17875 PF00466 Ribosomal protein L10 UIB01_RS17880 PF00687 Ribosomal protein L1p/L10e family UIB01_RS17885 PF00298 Ribosomal protein L11, RNA binding domain UIB01_RS17885 PF03946 Ribosomal protein L11, N-terminal domain UIB01_RS17890 PF00467 KOW motif UIB01_RS17890 PF02357 Transcription termination factor nusG UIB01_RS17895 PF00584 SecE/Sec61-gamma subunits of protein translocation complex UIB01_RS17905 PF03143 Elongation factor Tu C-terminal domain UIB01_RS17905 PF03144 Elongation factor Tu domain 2 UIB01_RS17905 PF00009 Elongation factor Tu GTP binding domain UIB01_RS17930 PF03309 Type III pantothenate kinase UIB01_RS17935 PF02237 Biotin protein ligase C terminal domain UIB01_RS17935 PF03099 Biotin/lipoate A/B protein ligase family UIB01_RS17935 PF08279 HTH domain UIB01_RS17970 PF01479 S4 domain UIB01_RS17970 PF00579 tRNA synthetases class I (W and Y) UIB01_RS17975 PF01551 Peptidase family M23 UIB01_RS17975 PF04225 Opacity-associated protein A LysM-like domain UIB01_RS17980 PF03702 Anhydro-N-acetylmuramic acid kinase UIB01_RS17985 PF01521 Iron-sulphur cluster biosynthesis UIB01_RS17990 PF01118 Semialdehyde dehydrogenase, NAD binding domain UIB01_RS17990 PF02774 Semialdehyde dehydrogenase, dimerisation domain UIB01_RS17995 PF03653 Uncharacterised protein family (UPF0093) UIB01_RS18005 PF00004 ATPase family associated with various cellular activities (AAA) UIB01_RS18005 PF17862 AAA+ lid domain UIB01_RS18005 PF06480 FtsH Extracellular UIB01_RS18005 PF01434 Peptidase family M41 UIB01_RS18010 PF01230 HIT domain UIB01_RS18015 PF03232 Ubiquinone biosynthesis protein COQ7 UIB01_RS18020 PF02566 OsmC-like protein UIB01_RS18025 PF00027 Cyclic nucleotide-binding domain UIB01_RS18025 PF13545 Crp-like helix-turn-helix domain UIB01_RS18030 PF00218 Indole-3-glycerol phosphate synthase UIB01_RS18035 PF00591 Glycosyl transferase family, a/b domain UIB01_RS18035 PF02885 Glycosyl transferase family, helical bundle domain UIB01_RS18040 PF00117 Glutamine amidotransferase class-I UIB01_RS18045 PF04715 Anthranilate synthase component I, N terminal region UIB01_RS18045 PF00425 chorismate binding enzyme UIB01_RS18050 PF13419 Haloacid dehalogenase-like hydrolase UIB01_RS18055 PF00834 Ribulose-phosphate 3 epimerase family UIB01_RS18060 PF00202 Aminotransferase class-III UIB01_RS18065 PF00171 Aldehyde dehydrogenase family UIB01_RS18070 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS18075 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS18085 PF08402 TOBE domain UIB01_RS18085 PF00005 ABC transporter UIB01_RS18090 PF00196 Bacterial regulatory proteins, luxR family UIB01_RS18090 PF00072 Response regulator receiver domain UIB01_RS18095 PF07730 Histidine kinase UIB01_RS18095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS18095 PF05384 Sensor protein DegS UIB01_RS18105 PF00226 DnaJ domain UIB01_RS18105 PF05099 Tellurite resistance protein TerB UIB01_RS18110 PF00483 Nucleotidyl transferase UIB01_RS18115 PF01636 Phosphotransferase enzyme family UIB01_RS18120 PF04453 LPS transport system D UIB01_RS18120 PF03968 OstA-like protein UIB01_RS18125 PF00639 PPIC-type PPIASE domain UIB01_RS18125 PF09312 SurA N-terminal domain UIB01_RS18130 PF04166 Pyridoxal phosphate biosynthetic protein PdxA UIB01_RS18135 PF00398 Ribosomal RNA adenine dimethylase UIB01_RS18140 PF04379 ApaG domain UIB01_RS18145 PF00149 Calcineurin-like phosphoesterase UIB01_RS18150 PF00581 Rhodanese-like domain UIB01_RS18155 PF08298 PrkA AAA domain UIB01_RS18155 PF06798 PrkA serine protein kinase C-terminal domain UIB01_RS18160 PF04285 Protein of unknown function (DUF444) UIB01_RS18165 PF04293 SpoVR like protein UIB01_RS18170 PF12627 Probable RNA and SrmB- binding site of polymerase A UIB01_RS18170 PF01966 HD domain UIB01_RS18170 PF01743 Poly A polymerase head domain UIB01_RS18175 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) UIB01_RS18185 PF02660 Glycerol-3-phosphate acyltransferase UIB01_RS18190 PF00814 Glycoprotease family UIB01_RS18195 PF01165 Ribosomal protein S21 UIB01_RS18200 PF10410 DnaB-helicase binding domain of primase UIB01_RS18200 PF13662 Toprim domain UIB01_RS18200 PF08275 DNA primase catalytic core, N-terminal domain UIB01_RS18200 PF01807 CHC2 zinc finger UIB01_RS18200 PF08278 DNA primase DnaG DnaB-binding UIB01_RS18205 PF03979 Sigma-70 factor, region 1.1 UIB01_RS18205 PF04545 Sigma-70, region 4 UIB01_RS18205 PF04539 Sigma-70 region 3 UIB01_RS18205 PF04542 Sigma-70 region 2 UIB01_RS18205 PF00140 Sigma-70 factor, region 1.2 UIB01_RS18205 PF04546 Sigma-70, non-essential region UIB01_RS18215 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UIB01_RS18215 PF01348 Type II intron maturase UIB01_RS18220 PF02080 TrkA-C domain UIB01_RS18220 PF03600 Citrate transporter UIB01_RS18225 PF01053 Cys/Met metabolism PLP-dependent enzyme UIB01_RS18230 PF00085 Thioredoxin UIB01_RS18245 PF00550 Phosphopantetheine attachment site UIB01_RS18250 PF00550 Phosphopantetheine attachment site UIB01_RS18260 PF07977 FabA-like domain UIB01_RS18275 PF00221 Aromatic amino acid lyase UIB01_RS18295 PF01494 FAD binding domain UIB01_RS18305 PF00109 Beta-ketoacyl synthase, N-terminal domain UIB01_RS18305 PF02801 Beta-ketoacyl synthase, C-terminal domain UIB01_RS18320 PF00109 Beta-ketoacyl synthase, N-terminal domain UIB01_RS18320 PF02801 Beta-ketoacyl synthase, C-terminal domain UIB01_RS18335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS18335 PF03466 LysR substrate binding domain UIB01_RS18340 PF07690 Major Facilitator Superfamily UIB01_RS18345 PF01208 Uroporphyrinogen decarboxylase (URO-D) UIB01_RS18350 PF07992 Pyridine nucleotide-disulphide oxidoreductase UIB01_RS18350 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster UIB01_RS18355 PF04898 Glutamate synthase central domain UIB01_RS18355 PF01645 Conserved region in glutamate synthase UIB01_RS18355 PF01493 GXGXG motif UIB01_RS18355 PF00310 Glutamine amidotransferases class-II UIB01_RS18360 PF05036 Sporulation related domain UIB01_RS18365 PF01761 3-dehydroquinate synthase UIB01_RS18370 PF01202 Shikimate kinase UIB01_RS18375 PF07660 Secretin and TonB N terminus short domain UIB01_RS18375 PF11741 AMIN domain UIB01_RS18375 PF00263 Bacterial type II and III secretion system protein UIB01_RS18375 PF03958 Bacterial type II/III secretion system short domain UIB01_RS18380 PF04351 Pilus assembly protein, PilP UIB01_RS18385 PF04350 Pilus assembly protein, PilO UIB01_RS18390 PF05137 Fimbrial assembly protein (PilN) UIB01_RS18395 PF11104 Type IV pilus assembly protein PilM; UIB01_RS18400 PF17092 Penicillin-binding protein OB-like domain UIB01_RS18400 PF00912 Transglycosylase UIB01_RS18400 PF00905 Penicillin binding protein transpeptidase domain UIB01_RS18405 PF00390 Malic enzyme, N-terminal domain UIB01_RS18405 PF03949 Malic enzyme, NAD binding domain UIB01_RS18415 PF01197 Ribosomal protein L31 UIB01_RS18420 PF18319 PriA DNA helicase Cys-rich region (CRR) domain UIB01_RS18420 PF00271 Helicase conserved C-terminal domain UIB01_RS18420 PF00270 DEAD/DEAH box helicase UIB01_RS18420 PF17764 3′ DNA-binding domain (3′BD) UIB01_RS18420 PF18074 Primosomal protein N C-terminal domain UIB01_RS18425 PF03485 Arginyl tRNA synthetase N terminal domain UIB01_RS18425 PF00750 tRNA synthetases class I (R) UIB01_RS18425 PF05746 DALR anticodon binding domain UIB01_RS18435 PF00175 Oxidoreductase NAD-binding domain UIB01_RS18440 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UIB01_RS18445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UIB01_RS18445 PF07498 Rho termination factor, N-terminal domain UIB01_RS18445 PF07497 Rho termination factor, RNA-binding domain UIB01_RS18450 PF00085 Thioredoxin UIB01_RS18460 PF02541 Ppx/GppA phosphatase family UIB01_RS18465 PF02503 Polyphosphate kinase middle domain UIB01_RS18465 PF13090 Polyphosphate kinase C-terminal domain 2 UIB01_RS18465 PF17941 Polyphosphate kinase C-terminal domain 1 UIB01_RS18465 PF13089 Polyphosphate kinase N-terminal domain UIB01_RS18470 PF00490 Delta-aminolevulinic acid dehydratase UIB01_RS18480 PF03061 Thioesterase superfamily UIB01_RS18485 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 UIB01_RS18490 PF01810 LysE type translocator UIB01_RS18500 PF12848 ABC transporter UIB01_RS18500 PF00005 ABC transporter UIB01_RS18515 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ UIB01_RS18520 PF02600 Disulfide bond formation protein DsbB UIB01_RS18535 PF02602 Uroporphyrinogen-III synthase HemD UIB01_RS18540 PF03900 Porphobilinogen deaminase, C-terminal domain UIB01_RS18540 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain UIB01_RS18545 PF04397 LytTr DNA-binding domain UIB01_RS18545 PF00072 Response regulator receiver domain UIB01_RS18550 PF07694 5TMR of 5TMR-LYT UIB01_RS18550 PF06580 Histidine kinase UIB01_RS18555 PF14698 Argininosuccinate lyase C-terminal UIB01_RS18555 PF00206 Lyase UIB01_RS18605 PF12633 Adenylate cyclase NT domain UIB01_RS18605 PF01295 Adenylate cyclase, class-I UIB01_RS18610 PF01272 Transcription elongation factor, GreA/GreB, C-term UIB01_RS18610 PF14760 Rnk N-terminus UIB01_RS18615 PF01491 Frataxin-like domain UIB01_RS18620 PF13627 Prokaryotic lipoprotein-attachment site UIB01_RS18625 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain UIB01_RS18625 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain UIB01_RS18630 PF01678 Diaminopimelate epimerase UIB01_RS18640 PF02899 Phage integrase, N-terminal SAM-like domain UIB01_RS18640 PF00589 Phage integrase family UIB01_RS18645 PF13419 Haloacid dehalogenase-like hydrolase UIB01_RS18655 PF01894 Uncharacterised protein family UPF0047 UIB01_RS18660 PF00909 Ammonium Transporter Family UIB01_RS18665 PF00909 Ammonium Transporter Family UIB01_RS18670 PF00543 Nitrogen regulatory protein P-II UIB01_RS18680 PF13335 Magnesium chelatase, subunit ChlI C-terminal UIB01_RS18680 PF01078 Magnesium chelatase, subunit ChlI UIB01_RS18685 PF02028 BCCT, betaine/carnitine/choline family transporter UIB01_RS18690 PF00563 EAL domain UIB01_RS18690 PF03707 Bacterial signalling protein N terminal repeat UIB01_RS18690 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS18695 PF00580 UvrD/REP helicase N-terminal domain UIB01_RS18695 PF13361 UvrD-like helicase C-terminal domain UIB01_RS18700 PF03006 Haemolysin-III related UIB01_RS18705 PF01614 Bacterial transcriptional regulator UIB01_RS18705 PF09339 IclR helix-turn-helix domain UIB01_RS18710 PF00171 Aldehyde dehydrogenase family UIB01_RS18715 PF00465 Iron-containing alcohol dehydrogenase UIB01_RS18725 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain UIB01_RS18725 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain UIB01_RS18730 PF00128 Alpha amylase, catalytic domain UIB01_RS18735 PF00128 Alpha amylase, catalytic domain UIB01_RS18735 PF16657 Maltogenic Amylase, C-terminal domain UIB01_RS18745 PF00156 Phosphoribosyl transferase domain UIB01_RS18755 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UIB01_RS18770 PF01266 FAD dependent oxidoreductase UIB01_RS18775 PF01037 Lrp/AsnC ligand binding domain UIB01_RS18780 PF01266 FAD dependent oxidoreductase UIB01_RS18785 PF13091 PLD-like domain UIB01_RS18800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS18805 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UIB01_RS18805 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UIB01_RS18805 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain UIB01_RS18820 PF04002 RadC-like JAB domain UIB01_RS18825 PF04127 DNA / pantothenate metabolism flavoprotein UIB01_RS18825 PF02441 Flavoprotein UIB01_RS18830 PF00692 dUTPase UIB01_RS18840 PF00696 Amino acid kinase family UIB01_RS18855 PF00156 Phosphoribosyl transferase domain UIB01_RS18870 PF01138 3' exoribonuclease family, domain 1 UIB01_RS18870 PF03725 3' exoribonuclease family, domain 2 UIB01_RS18875 PF08340 Domain of unknown function (DUF1732) UIB01_RS18875 PF03755 YicC-like family, N-terminal region UIB01_RS18880 PF00625 Guanylate kinase UIB01_RS18885 PF01192 RNA polymerase Rpb6 UIB01_RS18890 PF02824 TGS domain UIB01_RS18890 PF04607 Region found in RelA / SpoT proteins UIB01_RS18890 PF13291 ACT domain UIB01_RS18895 PF01042 Endoribonuclease L-PSP UIB01_RS18915 PF00004 ATPase family associated with various cellular activities (AAA) UIB01_RS18915 PF17862 AAA+ lid domain UIB01_RS18915 PF06480 FtsH Extracellular UIB01_RS18915 PF01434 Peptidase family M41 UIB01_RS18920 PF12833 Helix-turn-helix domain UIB01_RS18920 PF02311 AraC-like ligand binding domain UIB01_RS18935 PF04536 TPM domain UIB01_RS18940 PF04011 LemA family UIB01_RS18945 PF03466 LysR substrate binding domain UIB01_RS18945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS18950 PF08240 Alcohol dehydrogenase GroES-like domain UIB01_RS18950 PF00107 Zinc-binding dehydrogenase UIB01_RS18955 PF02515 CoA-transferase family III UIB01_RS18960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UIB01_RS18960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UIB01_RS18960 PF02770 Acyl-CoA dehydrogenase, middle domain UIB01_RS18965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS18965 PF03466 LysR substrate binding domain UIB01_RS18980 PF00216 Bacterial DNA-binding protein UIB01_RS18985 PF07992 Pyridine nucleotide-disulphide oxidoreductase UIB01_RS18985 PF18113 Rubredoxin binding C-terminal domain UIB01_RS18990 PF00301 Rubredoxin UIB01_RS18995 PF02652 L-lactate permease UIB01_RS19000 PF01274 Malate synthase UIB01_RS19005 PF03928 Haem-degrading UIB01_RS19010 PF02754 Cysteine-rich domain UIB01_RS19010 PF13183 4Fe-4S dicluster domain UIB01_RS19015 PF01565 FAD binding domain UIB01_RS19020 PF01565 FAD binding domain UIB01_RS19020 PF02913 FAD linked oxidases, C-terminal domain UIB01_RS19025 PF07729 FCD domain UIB01_RS19025 PF00392 Bacterial regulatory proteins, gntR family UIB01_RS19030 PF04345 Chorismate lyase UIB01_RS19035 PF01040 UbiA prenyltransferase family UIB01_RS19040 PF00072 Response regulator receiver domain UIB01_RS19040 PF00486 Transcriptional regulatory protein, C terminal UIB01_RS19045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS19045 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS19045 PF00989 PAS fold UIB01_RS19045 PF11808 Phosphate regulon sensor protein PhoR UIB01_RS19050 PF01595 Cyclin M transmembrane N-terminal domain UIB01_RS19050 PF03471 Transporter associated domain UIB01_RS19050 PF00571 CBS domain UIB01_RS19055 PF08525 Opacity-associated protein A N-terminal motif UIB01_RS19055 PF01551 Peptidase family M23 UIB01_RS19055 PF01476 LysM domain UIB01_RS19060 PF00072 Response regulator receiver domain UIB01_RS19075 PF00005 ABC transporter UIB01_RS19075 PF12399 Branched-chain amino acid ATP-binding cassette transporter UIB01_RS19080 PF00005 ABC transporter UIB01_RS19085 PF02653 Branched-chain amino acid transport system / permease component UIB01_RS19095 PF13614 AAA domain UIB01_RS19100 PF00303 Thymidylate synthase UIB01_RS19105 PF01790 Prolipoprotein diacylglyceryl transferase UIB01_RS19110 PF01925 Sulfite exporter TauE/SafE UIB01_RS19120 PF00391 PEP-utilising enzyme, mobile domain UIB01_RS19120 PF05524 PEP-utilising enzyme, N-terminal UIB01_RS19120 PF01590 GAF domain UIB01_RS19120 PF02896 PEP-utilising enzyme, TIM barrel domain UIB01_RS19125 PF00293 NUDIX domain UIB01_RS19140 PF00291 Pyridoxal-phosphate dependent enzyme UIB01_RS19140 PF00585 C-terminal regulatory domain of Threonine dehydratase UIB01_RS19145 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) UIB01_RS19150 PF07411 Domain of unknown function (DUF1508) UIB01_RS19155 PF06977 SdiA-regulated UIB01_RS19160 PF06977 SdiA-regulated UIB01_RS19165 PF01557 Fumarylacetoacetate (FAA) hydrolase family UIB01_RS19170 PF01565 FAD binding domain UIB01_RS19170 PF02913 FAD linked oxidases, C-terminal domain UIB01_RS19175 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UIB01_RS19175 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UIB01_RS19200 PF00072 Response regulator receiver domain UIB01_RS19200 PF00196 Bacterial regulatory proteins, luxR family UIB01_RS19225 PF00072 Response regulator receiver domain UIB01_RS19225 PF00486 Transcriptional regulatory protein, C terminal UIB01_RS19230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS19240 PF00361 Proton-conducting membrane transporter UIB01_RS19245 PF00361 Proton-conducting membrane transporter UIB01_RS19250 PF00361 Proton-conducting membrane transporter UIB01_RS19265 PF03334 Na+/H+ antiporter subunit UIB01_RS19280 PF13722 5TM C-terminal transporter carbon starvation CstA UIB01_RS19280 PF02554 Carbon starvation protein CstA UIB01_RS19290 PF02374 Anion-transporting ATPase UIB01_RS19290 PF17886 HSP20-like domain found in ArsA UIB01_RS19300 PF00156 Phosphoribosyl transferase domain UIB01_RS19300 PF01738 Dienelactone hydrolase family UIB01_RS19305 PF00156 Phosphoribosyl transferase domain UIB01_RS19305 PF01738 Dienelactone hydrolase family UIB01_RS19310 PF13416 Bacterial extracellular solute-binding protein UIB01_RS19315 PF00563 EAL domain UIB01_RS19315 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS19335 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UIB01_RS19335 PF00384 Molybdopterin oxidoreductase UIB01_RS19335 PF01568 Molydopterin dinucleotide binding domain UIB01_RS19350 PF00034 Cytochrome c UIB01_RS19360 PF07308 Protein of unknown function (DUF1456) UIB01_RS19365 PF02954 Bacterial regulatory protein, Fis family UIB01_RS19365 PF00072 Response regulator receiver domain UIB01_RS19365 PF00158 Sigma-54 interaction domain UIB01_RS19370 PF00072 Response regulator receiver domain UIB01_RS19370 PF13188 PAS domain UIB01_RS19370 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS19370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS19370 PF08448 PAS fold UIB01_RS19380 PF12697 Alpha/beta hydrolase family UIB01_RS19400 PF01527 Transposase UIB01_RS19405 PF00665 Integrase core domain UIB01_RS19405 PF13276 HTH-like domain UIB01_RS19405 PF13333 Integrase core domain UIB01_RS19410 PF14436 Bacterial EndoU nuclease UIB01_RS19410 PF05594 Haemagluttinin repeat UIB01_RS19410 PF13332 Hemagglutinin repeat UIB01_RS19410 PF05860 haemagglutination activity domain UIB01_RS19410 PF04829 Pre-toxin domain with VENN motif UIB01_RS19415 PF00665 Integrase core domain UIB01_RS19415 PF13936 Helix-turn-helix domain UIB01_RS19420 PF14436 Bacterial EndoU nuclease UIB01_RS19420 PF05594 Haemagluttinin repeat UIB01_RS19420 PF13332 Hemagglutinin repeat UIB01_RS19420 PF05860 haemagglutination activity domain UIB01_RS19420 PF04829 Pre-toxin domain with VENN motif UIB01_RS19435 PF00072 Response regulator receiver domain UIB01_RS19440 PF17203 Single cache domain 3 UIB01_RS19440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS19440 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain UIB01_RS19440 PF00989 PAS fold UIB01_RS19445 PF03390 2-hydroxycarboxylate transporter family UIB01_RS19450 PF12729 Four helix bundle sensory module for signal transduction UIB01_RS19450 PF00672 HAMP domain UIB01_RS19450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS19455 PF00679 Elongation factor G C-terminus UIB01_RS19455 PF00009 Elongation factor Tu GTP binding domain UIB01_RS19455 PF03144 Elongation factor Tu domain 2 UIB01_RS19460 PF02568 Thiamine biosynthesis protein (ThiI) UIB01_RS19460 PF02926 THUMP domain UIB01_RS19465 PF03951 Glutamine synthetase, beta-Grasp domain UIB01_RS19465 PF00120 Glutamine synthetase, catalytic domain UIB01_RS19480 PF00989 PAS fold UIB01_RS19480 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS19480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS19485 PF00072 Response regulator receiver domain UIB01_RS19485 PF02954 Bacterial regulatory protein, Fis family UIB01_RS19485 PF00158 Sigma-54 interaction domain UIB01_RS19495 PF00588 SpoU rRNA Methylase family UIB01_RS19500 PF00384 Molybdopterin oxidoreductase UIB01_RS19505 PF00227 Proteasome subunit UIB01_RS19510 PF00004 ATPase family associated with various cellular activities (AAA) UIB01_RS19510 PF07724 AAA domain (Cdc48 subfamily) UIB01_RS19525 PF01209 ubiE/COQ5 methyltransferase family UIB01_RS19535 PF03109 ABC1 family UIB01_RS19540 PF01502 Phosphoribosyl-AMP cyclohydrolase UIB01_RS19545 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase UIB01_RS19550 PF02416 mttA/Hcf106 family UIB01_RS19555 PF02416 mttA/Hcf106 family UIB01_RS19560 PF00902 Sec-independent protein translocase protein (TatC) UIB01_RS19570 PF03682 Uncharacterised protein family (UPF0158) UIB01_RS19575 PF02580 D-Tyr-tRNA(Tyr) deacylase UIB01_RS19580 PF00561 alpha/beta hydrolase fold UIB01_RS19605 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain UIB01_RS19610 PF00343 Carbohydrate phosphorylase UIB01_RS19625 PF00459 Inositol monophosphatase family UIB01_RS19630 PF00293 NUDIX domain UIB01_RS19635 PF13419 Haloacid dehalogenase-like hydrolase UIB01_RS19640 PF08448 PAS fold UIB01_RS19640 PF13188 PAS domain UIB01_RS19640 PF00072 Response regulator receiver domain UIB01_RS19640 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS19640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS19645 PF02634 FdhD/NarQ family UIB01_RS19655 PF03061 Thioesterase superfamily UIB01_RS19660 PF00465 Iron-containing alcohol dehydrogenase UIB01_RS19670 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UIB01_RS19670 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UIB01_RS19670 PF00378 Enoyl-CoA hydratase/isomerase UIB01_RS19675 PF03466 LysR substrate binding domain UIB01_RS19675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS19680 PF08678 Rsbr N terminal UIB01_RS19680 PF01740 STAS domain UIB01_RS19685 PF01740 STAS domain UIB01_RS19690 PF13581 Histidine kinase-like ATPase domain UIB01_RS19700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS19700 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS19705 PF00072 Response regulator receiver domain UIB01_RS19705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS19705 PF13426 PAS domain UIB01_RS19710 PF00313 'Cold-shock' DNA-binding domain UIB01_RS19740 PF00248 Aldo/keto reductase family UIB01_RS19750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UIB01_RS19765 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain UIB01_RS19765 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain UIB01_RS19775 PF13026 Protein of unknown function (DUF3887) UIB01_RS19775 PF12146 Serine aminopeptidase, S33 UIB01_RS19785 PF00271 Helicase conserved C-terminal domain UIB01_RS19785 PF09382 RQC domain UIB01_RS19785 PF00570 HRDC domain UIB01_RS19785 PF00270 DEAD/DEAH box helicase UIB01_RS19785 PF16124 RecQ zinc-binding UIB01_RS19795 PF00881 Nitroreductase family UIB01_RS19800 PF01293 Phosphoenolpyruvate carboxykinase UIB01_RS19805 PF01430 Hsp33 protein UIB01_RS19810 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain UIB01_RS19810 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UIB01_RS19810 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UIB01_RS19815 PF01370 NAD dependent epimerase/dehydratase family UIB01_RS19820 PF02397 Bacterial sugar transferase UIB01_RS19840 PF13579 Glycosyl transferase 4-like domain UIB01_RS19840 PF00534 Glycosyl transferases group 1 UIB01_RS19850 PF00535 Glycosyl transferase family 2 UIB01_RS19860 PF01522 Polysaccharide deacetylase UIB01_RS19885 PF04794 YdjC-like protein UIB01_RS19890 PF01479 S4 domain UIB01_RS19895 PF18030 RimK PreATP-grasp domain UIB01_RS19895 PF08443 RimK-like ATP-grasp domain UIB01_RS19900 PF18030 RimK PreATP-grasp domain UIB01_RS19900 PF08443 RimK-like ATP-grasp domain UIB01_RS19905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS19905 PF00672 HAMP domain UIB01_RS19905 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS19910 PF00072 Response regulator receiver domain UIB01_RS19910 PF00486 Transcriptional regulatory protein, C terminal UIB01_RS19915 PF09371 Tex-like protein N-terminal domain UIB01_RS19915 PF17674 HHH domain UIB01_RS19915 PF16921 Tex protein YqgF-like domain UIB01_RS19915 PF00575 S1 RNA binding domain UIB01_RS19925 PF04262 Glutamate-cysteine ligase UIB01_RS19935 PF00583 Acetyltransferase (GNAT) family UIB01_RS19935 PF00696 Amino acid kinase family UIB01_RS19940 PF07687 Peptidase dimerisation domain UIB01_RS19940 PF01546 Peptidase family M20/M25/M40 UIB01_RS19945 PF01384 Phosphate transporter family UIB01_RS19950 PF01865 Protein of unknown function DUF47 UIB01_RS19960 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain UIB01_RS19960 PF00437 Type II/IV secretion system protein UIB01_RS19970 PF03734 L,D-transpeptidase catalytic domain UIB01_RS19970 PF01471 Putative peptidoglycan binding domain UIB01_RS19975 PF00072 Response regulator receiver domain UIB01_RS19975 PF13188 PAS domain UIB01_RS19975 PF08448 PAS fold UIB01_RS19975 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS19975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS19985 PF02566 OsmC-like protein UIB01_RS19990 PF03480 Bacterial extracellular solute-binding protein, family 7 UIB01_RS20000 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component UIB01_RS20060 PF05233 PHB accumulation regulatory domain UIB01_RS20060 PF07879 PHB/PHA accumulation regulator DNA-binding domain UIB01_RS20070 PF11339 Protein of unknown function (DUF3141) UIB01_RS20075 PF01515 Phosphate acetyl/butaryl transferase UIB01_RS20080 PF00871 Acetokinase family UIB01_RS20090 PF03616 Sodium/glutamate symporter UIB01_RS20105 PF00106 short chain dehydrogenase UIB01_RS20110 PF02803 Thiolase, C-terminal domain UIB01_RS20110 PF00108 Thiolase, N-terminal domain UIB01_RS20115 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus UIB01_RS20120 PF13533 Biotin-lipoyl like UIB01_RS20125 PF00005 ABC transporter UIB01_RS20135 PF02321 Outer membrane efflux protein UIB01_RS20145 PF13520 Amino acid permease UIB01_RS20155 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain UIB01_RS20155 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain UIB01_RS20160 PF00696 Amino acid kinase family UIB01_RS20170 PF00665 Integrase core domain UIB01_RS20175 PF01695 IstB-like ATP binding protein UIB01_RS20215 PF16919 Protein kinase G rubredoxin domain UIB01_RS20215 PF16918 Protein kinase G tetratricopeptide repeat UIB01_RS20215 PF00069 Protein kinase domain UIB01_RS20250 PF01420 Type I restriction modification DNA specificity domain UIB01_RS20255 PF12161 HsdM N-terminal domain UIB01_RS20255 PF02384 N-6 DNA Methylase UIB01_RS20260 PF08463 EcoEI R protein C-terminal UIB01_RS20260 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) UIB01_RS20260 PF04851 Type III restriction enzyme, res subunit UIB01_RS20260 PF00271 Helicase conserved C-terminal domain UIB01_RS20265 PF00072 Response regulator receiver domain UIB01_RS20265 PF00158 Sigma-54 interaction domain UIB01_RS20270 PF13356 Arm DNA-binding domain UIB01_RS20270 PF14659 Phage integrase, N-terminal SAM-like domain UIB01_RS20270 PF00589 Phage integrase family UIB01_RS20275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UIB01_RS20315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UIB01_RS20315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UIB01_RS20335 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain UIB01_RS20335 PF02222 ATP-grasp domain UIB01_RS20340 PF00731 AIR carboxylase UIB01_RS20345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS20345 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS20350 PF01261 Xylose isomerase-like TIM barrel UIB01_RS20350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UIB01_RS20355 PF00501 AMP-binding enzyme UIB01_RS20355 PF13193 AMP-binding enzyme C-terminal domain UIB01_RS20360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS20360 PF03466 LysR substrate binding domain UIB01_RS20365 PF10415 Fumarase C C-terminus UIB01_RS20365 PF00206 Lyase UIB01_RS20370 PF00375 Sodium:dicarboxylate symporter family UIB01_RS20380 PF01235 Sodium:alanine symporter family UIB01_RS20385 PF00710 Asparaginase, N-terminal UIB01_RS20385 PF17763 Glutaminase/Asparaginase C-terminal domain UIB01_RS20395 PF00484 Carbonic anhydrase UIB01_RS20400 PF04960 Glutaminase UIB01_RS20415 PF00682 HMGL-like UIB01_RS20415 PF02436 Conserved carboxylase domain UIB01_RS20415 PF00364 Biotin-requiring enzyme UIB01_RS20420 PF02785 Biotin carboxylase C-terminal domain UIB01_RS20420 PF00289 Biotin carboxylase, N-terminal domain UIB01_RS20420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UIB01_RS20425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS20425 PF03466 LysR substrate binding domain UIB01_RS20435 PF02685 Glucokinase UIB01_RS20435 PF01418 Helix-turn-helix domain, rpiR family UIB01_RS20435 PF01380 SIS domain UIB01_RS20440 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain UIB01_RS20440 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain UIB01_RS20445 PF00583 Acetyltransferase (GNAT) family UIB01_RS20450 PF00202 Aminotransferase class-III UIB01_RS20455 PF06339 Ectoine synthase UIB01_RS20460 PF05721 Phytanoyl-CoA dioxygenase (PhyH) UIB01_RS20465 PF00696 Amino acid kinase family UIB01_RS20465 PF13840 ACT domain UIB01_RS20470 PF04325 Protein of unknown function (DUF465) UIB01_RS20475 PF01136 Peptidase family U32 UIB01_RS20475 PF16325 Peptidase family U32 C-terminal domain UIB01_RS20480 PF00563 EAL domain UIB01_RS20480 PF03707 Bacterial signalling protein N terminal repeat UIB01_RS20480 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS20485 PF00580 UvrD/REP helicase N-terminal domain UIB01_RS20485 PF13361 UvrD-like helicase C-terminal domain UIB01_RS20490 PF03480 Bacterial extracellular solute-binding protein, family 7 UIB01_RS20500 PF00561 alpha/beta hydrolase fold UIB01_RS20505 PF02566 OsmC-like protein UIB01_RS20525 PF13247 4Fe-4S dicluster domain UIB01_RS20525 PF09163 Formate dehydrogenase N, transmembrane UIB01_RS20530 PF01292 Prokaryotic cytochrome b561 UIB01_RS20535 PF04216 Protein involved in formate dehydrogenase formation UIB01_RS20540 PF12390 Selenocysteine synthase N terminal UIB01_RS20540 PF03841 L-seryl-tRNA selenium transferase UIB01_RS20545 PF00009 Elongation factor Tu GTP binding domain UIB01_RS20545 PF03144 Elongation factor Tu domain 2 UIB01_RS20545 PF09107 Elongation factor SelB, winged helix UIB01_RS20545 PF09106 Elongation factor SelB, winged helix UIB01_RS20560 PF01597 Glycine cleavage H-protein UIB01_RS20575 PF00582 Universal stress protein family UIB01_RS20580 PF01740 STAS domain UIB01_RS20580 PF00916 Sulfate permease family UIB01_RS20585 PF11871 Domain of unknown function (DUF3391) UIB01_RS20585 PF01966 HD domain UIB01_RS20590 PF02743 Cache domain UIB01_RS20590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS20590 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS20595 PF02954 Bacterial regulatory protein, Fis family UIB01_RS20595 PF00072 Response regulator receiver domain UIB01_RS20595 PF00158 Sigma-54 interaction domain UIB01_RS20605 PF03795 YCII-related domain UIB01_RS20615 PF07715 TonB-dependent Receptor Plug Domain UIB01_RS20615 PF00593 TonB dependent receptor UIB01_RS20630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS20630 PF13426 PAS domain UIB01_RS20630 PF00072 Response regulator receiver domain UIB01_RS20635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UIB01_RS20635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UIB01_RS20635 PF02770 Acyl-CoA dehydrogenase, middle domain UIB01_RS20655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UIB01_RS20655 PF00460 Flagella basal body rod protein UIB01_RS20660 PF01464 Transglycosylase SLT domain UIB01_RS20660 PF14718 Soluble lytic murein transglycosylase L domain UIB01_RS20665 PF02119 Flagellar P-ring protein UIB01_RS20670 PF02107 Flagellar L-ring protein UIB01_RS20675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UIB01_RS20675 PF00460 Flagella basal body rod protein UIB01_RS20680 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UIB01_RS20680 PF00460 Flagella basal body rod protein UIB01_RS20685 PF00460 Flagella basal body rod protein UIB01_RS20685 PF07559 Flagellar basal body protein FlaE UIB01_RS20685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UIB01_RS20690 PF03963 Flagellar hook capping protein - N-terminal region UIB01_RS20690 PF13860 FlgD Ig-like domain UIB01_RS20690 PF13861 FlgD Tudor-like domain UIB01_RS20695 PF00460 Flagella basal body rod protein UIB01_RS20695 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UIB01_RS20700 PF00460 Flagella basal body rod protein UIB01_RS20710 PF00700 Bacterial flagellin C-terminal helical region UIB01_RS20710 PF00669 Bacterial flagellin N-terminal helical region UIB01_RS20725 PF13677 Membrane MotB of proton-channel complex MotA/MotB UIB01_RS20725 PF00691 OmpA family UIB01_RS20730 PF01618 MotA/TolQ/ExbB proton channel family UIB01_RS20735 PF04545 Sigma-70, region 4 UIB01_RS20735 PF04542 Sigma-70 region 2 UIB01_RS20760 PF07196 Flagellin hook IN motif UIB01_RS20760 PF07195 Flagellar hook-associated protein 2 C-terminus UIB01_RS20760 PF02465 Flagellar hook-associated protein 2 N-terminus UIB01_RS20780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UIB01_RS20780 PF18269 T3SS EscN ATPase C-terminal domain UIB01_RS20790 PF14842 FliG N-terminal domain UIB01_RS20790 PF01706 FliG C-terminal domain UIB01_RS20790 PF14841 FliG middle domain UIB01_RS20795 PF01514 Secretory protein of YscJ/FliF family UIB01_RS20795 PF08345 Flagellar M-ring protein C-terminal UIB01_RS20800 PF02049 Flagellar hook-basal body complex protein FliE UIB01_RS20805 PF02954 Bacterial regulatory protein, Fis family UIB01_RS20805 PF00072 Response regulator receiver domain UIB01_RS20805 PF00158 Sigma-54 interaction domain UIB01_RS20815 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term UIB01_RS20820 PF00813 FliP family UIB01_RS20825 PF01313 Bacterial export proteins, family 3 UIB01_RS20830 PF01311 Bacterial export proteins, family 1 UIB01_RS20835 PF01312 FlhB HrpN YscU SpaS Family UIB01_RS20840 PF00771 FHIPEP family UIB01_RS20860 PF05175 Methyltransferase small domain UIB01_RS20860 PF17827 PrmC N-terminal domain UIB01_RS20875 PF13823 Alcohol dehydrogenase GroES-associated UIB01_RS20875 PF08240 Alcohol dehydrogenase GroES-like domain UIB01_RS20875 PF00107 Zinc-binding dehydrogenase UIB01_RS20885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS20885 PF03466 LysR substrate binding domain UIB01_RS20890 PF00270 DEAD/DEAH box helicase UIB01_RS20890 PF17191 RecG wedge domain UIB01_RS20890 PF00271 Helicase conserved C-terminal domain UIB01_RS20905 PF05134 Type II secretion system (T2SS), protein L UIB01_RS20905 PF12693 GspL periplasmic domain UIB01_RS20910 PF03934 Type II secretion system (T2SS), protein K UIB01_RS20915 PF07963 Prokaryotic N-terminal methylation motif UIB01_RS20915 PF11612 Type II secretion system (T2SS), protein J UIB01_RS20920 PF02501 Type II secretion system (T2SS), protein I UIB01_RS20920 PF07963 Prokaryotic N-terminal methylation motif UIB01_RS20925 PF12019 Type II transport protein GspH UIB01_RS20925 PF07963 Prokaryotic N-terminal methylation motif UIB01_RS20930 PF07963 Prokaryotic N-terminal methylation motif UIB01_RS20930 PF08334 Type II secretion system (T2SS), protein G UIB01_RS20935 PF00482 Type II secretion system (T2SS), protein F UIB01_RS20940 PF00437 Type II/IV secretion system protein UIB01_RS20945 PF05222 Alanine dehydrogenase/PNT, N-terminal domain UIB01_RS20945 PF01262 Alanine dehydrogenase/PNT, C-terminal domain UIB01_RS20950 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch UIB01_RS20955 PF02233 NAD(P) transhydrogenase beta subunit UIB01_RS20960 PF02525 Flavodoxin-like fold UIB01_RS20965 PF13593 SBF-like CPA transporter family (DUF4137) UIB01_RS20970 PF02311 AraC-like ligand binding domain UIB01_RS20970 PF12833 Helix-turn-helix domain UIB01_RS21015 PF04717 Type VI secretion system, phage-baseplate injector UIB01_RS21020 PF05638 Type VI secretion system effector, Hcp UIB01_RS21025 PF01367 5'-3' exonuclease, C-terminal SAM fold UIB01_RS21025 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain UIB01_RS21025 PF01612 3'-5' exonuclease UIB01_RS21025 PF00476 DNA polymerase family A UIB01_RS21035 PF01636 Phosphotransferase enzyme family UIB01_RS21040 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases UIB01_RS21040 PF03641 Possible lysine decarboxylase UIB01_RS21040 PF11892 Domain of unknown function (DUF3412) UIB01_RS21055 PF08471 Class II vitamin B12-dependent ribonucleotide reductase UIB01_RS21055 PF02867 Ribonucleotide reductase, barrel domain UIB01_RS21060 PF00471 Ribosomal protein L33 UIB01_RS21065 PF00830 Ribosomal L28 family UIB01_RS21070 PF13193 AMP-binding enzyme C-terminal domain UIB01_RS21070 PF00501 AMP-binding enzyme UIB01_RS21075 PF09339 IclR helix-turn-helix domain UIB01_RS21090 PF07690 Major Facilitator Superfamily UIB01_RS21110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UIB01_RS21110 PF02770 Acyl-CoA dehydrogenase, middle domain UIB01_RS21110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UIB01_RS21115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UIB01_RS21115 PF02770 Acyl-CoA dehydrogenase, middle domain UIB01_RS21115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UIB01_RS21120 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UIB01_RS21120 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UIB01_RS21120 PF00378 Enoyl-CoA hydratase/isomerase UIB01_RS21125 PF00486 Transcriptional regulatory protein, C terminal UIB01_RS21125 PF00072 Response regulator receiver domain UIB01_RS21130 PF00171 Aldehyde dehydrogenase family UIB01_RS21135 PF01322 Cytochrome C' UIB01_RS21140 PF01292 Prokaryotic cytochrome b561 UIB01_RS21165 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE UIB01_RS21175 PF06761 Intracellular multiplication and human macrophage-killing UIB01_RS21175 PF14331 ImcF-related N-terminal domain UIB01_RS21175 PF06744 Type VI secretion protein IcmF C-terminal UIB01_RS21185 PF00069 Protein kinase domain UIB01_RS21190 PF04717 Type VI secretion system, phage-baseplate injector UIB01_RS21210 PF00665 Integrase core domain UIB01_RS21210 PF13936 Helix-turn-helix domain UIB01_RS21220 PF00199 Catalase UIB01_RS21225 PF02405 Permease MlaE UIB01_RS21230 PF00005 ABC transporter UIB01_RS21245 PF13533 Biotin-lipoyl like UIB01_RS21250 PF00005 ABC transporter UIB01_RS21260 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS21260 PF17158 Membrane-associated sensor, integral membrane domain UIB01_RS21265 PF16363 GDP-mannose 4,6 dehydratase UIB01_RS21270 PF00483 Nucleotidyl transferase UIB01_RS21275 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase UIB01_RS21280 PF04321 RmlD substrate binding domain UIB01_RS21285 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS21285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS21285 PF02743 Cache domain UIB01_RS21290 PF00158 Sigma-54 interaction domain UIB01_RS21290 PF02954 Bacterial regulatory protein, Fis family UIB01_RS21290 PF00072 Response regulator receiver domain UIB01_RS21295 PF03480 Bacterial extracellular solute-binding protein, family 7 UIB01_RS21300 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component UIB01_RS21305 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component UIB01_RS21320 PF12697 Alpha/beta hydrolase family UIB01_RS21330 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS21335 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS21340 PF08402 TOBE domain UIB01_RS21340 PF00005 ABC transporter UIB01_RS21345 PF13416 Bacterial extracellular solute-binding protein UIB01_RS21350 PF13416 Bacterial extracellular solute-binding protein UIB01_RS21355 PF00202 Aminotransferase class-III UIB01_RS21360 PF00120 Glutamine synthetase, catalytic domain UIB01_RS21365 PF07722 Peptidase C26 UIB01_RS21370 PF00120 Glutamine synthetase, catalytic domain UIB01_RS21380 PF00795 Carbon-nitrogen hydrolase UIB01_RS21385 PF04371 Porphyromonas-type peptidyl-arginine deiminase UIB01_RS21395 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS21405 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS21405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS21405 PF00989 PAS fold UIB01_RS21410 PF00486 Transcriptional regulatory protein, C terminal UIB01_RS21410 PF00072 Response regulator receiver domain UIB01_RS21415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS21415 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS21415 PF00989 PAS fold UIB01_RS21415 PF16736 Single Cache-like UIB01_RS21420 PF00486 Transcriptional regulatory protein, C terminal UIB01_RS21420 PF00072 Response regulator receiver domain UIB01_RS21425 PF00072 Response regulator receiver domain UIB01_RS21425 PF00990 Diguanylate cyclase, GGDEF domain UIB01_RS21430 PF00171 Aldehyde dehydrogenase family UIB01_RS21435 PF00202 Aminotransferase class-III UIB01_RS21440 PF01297 Zinc-uptake complex component A periplasmic UIB01_RS21445 PF01475 Ferric uptake regulator family UIB01_RS21450 PF00005 ABC transporter UIB01_RS21455 PF00950 ABC 3 transport family UIB01_RS21460 PF01863 Protein of unknown function DUF45 UIB01_RS21465 PF00199 Catalase UIB01_RS21465 PF06628 Catalase-related immune-responsive UIB01_RS21465 PF18011 C-terminal domain found in long catalases UIB01_RS21470 PF00005 ABC transporter UIB01_RS21470 PF09383 NIL domain UIB01_RS21475 PF00528 Binding-protein-dependent transport system inner membrane component UIB01_RS21480 PF03180 NLPA lipoprotein UIB01_RS21485 PF08240 Alcohol dehydrogenase GroES-like domain UIB01_RS21495 PF00132 Bacterial transferase hexapeptide (six repeats) UIB01_RS21500 PF01432 Peptidase family M3 UIB01_RS21515 PF01757 Acyltransferase family UIB01_RS21520 PF04055 Radical SAM superfamily UIB01_RS21530 PF00116 Cytochrome C oxidase subunit II, periplasmic domain UIB01_RS21530 PF02790 Cytochrome C oxidase subunit II, transmembrane domain UIB01_RS21535 PF00115 Cytochrome C and Quinol oxidase polypeptide I UIB01_RS21540 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 UIB01_RS21545 PF00510 Cytochrome c oxidase subunit III UIB01_RS21570 PF01040 UbiA prenyltransferase family UIB01_RS21575 PF02630 SCO1/SenC UIB01_RS21585 PF07715 TonB-dependent Receptor Plug Domain UIB01_RS21585 PF00593 TonB dependent receptor UIB01_RS21595 PF08281 Sigma-70, region 4 UIB01_RS21595 PF04542 Sigma-70 region 2 UIB01_RS21610 PF02492 CobW/HypB/UreG, nucleotide-binding domain UIB01_RS21610 PF07683 Cobalamin synthesis protein cobW C-terminal domain UIB01_RS21625 PF01590 GAF domain UIB01_RS21625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS21625 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS21625 PF08446 PAS fold UIB01_RS21625 PF00360 Phytochrome region UIB01_RS21630 PF00072 Response regulator receiver domain UIB01_RS21635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS21635 PF00072 Response regulator receiver domain UIB01_RS21635 PF13426 PAS domain UIB01_RS21640 PF01126 Heme oxygenase UIB01_RS21645 PF01380 SIS domain UIB01_RS21650 PF00455 DeoR C terminal sensor domain UIB01_RS21650 PF08220 DeoR-like helix-turn-helix domain UIB01_RS21655 PF01810 LysE type translocator UIB01_RS21660 PF00132 Bacterial transferase hexapeptide (six repeats) UIB01_RS21660 PF14602 Hexapeptide repeat of succinyl-transferase UIB01_RS21660 PF12804 MobA-like NTP transferase domain UIB01_RS21665 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain UIB01_RS21665 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain UIB01_RS21670 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UIB01_RS21670 PF02874 ATP synthase alpha/beta family, beta-barrel domain UIB01_RS21675 PF00231 ATP synthase UIB01_RS21680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UIB01_RS21680 PF02874 ATP synthase alpha/beta family, beta-barrel domain UIB01_RS21680 PF00306 ATP synthase alpha/beta chain, C terminal domain UIB01_RS21685 PF00213 ATP synthase delta (OSCP) subunit UIB01_RS21690 PF00430 ATP synthase B/B' CF(0) UIB01_RS21695 PF00137 ATP synthase subunit C UIB01_RS21700 PF00119 ATP synthase A chain UIB01_RS21705 PF03899 ATP synthase I chain UIB01_RS21710 PF17762 HTH domain found in ParB protein UIB01_RS21710 PF02195 ParB-like nuclease domain UIB01_RS21715 PF13614 AAA domain UIB01_RS21720 PF02527 rRNA small subunit methyltransferase G UIB01_RS21725 PF13932 GidA associated domain UIB01_RS21725 PF01134 Glucose inhibited division protein A UIB01_RS21730 PF03334 Na+/H+ antiporter subunit UIB01_RS21740 PF01899 Na+/H+ ion antiporter subunit UIB01_RS21745 PF00361 Proton-conducting membrane transporter UIB01_RS21750 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L UIB01_RS21755 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter UIB01_RS21760 PF13244 Domain of unknown function (DUF4040) UIB01_RS21760 PF00361 Proton-conducting membrane transporter UIB01_RS21760 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus UIB01_RS21765 PF01926 50S ribosome-binding GTPase UIB01_RS21765 PF12631 MnmE helical domain UIB01_RS21765 PF10396 GTP-binding protein TrmE N-terminus UIB01_RS21770 PF14849 YidC periplasmic domain UIB01_RS21770 PF02096 60Kd inner membrane protein UIB01_RS21775 PF01809 Putative membrane protein insertion efficiency factor UIB01_RS21780 PF00825 Ribonuclease P UIB01_RS21785 PF00468 Ribosomal protein L34 UIB01_RS21810 PF12323 Helix-turn-helix domain UIB01_RS21810 PF01385 Probable transposase UIB01_RS21810 PF07282 Putative transposase DNA-binding domain UIB01_RS21830 PF00717 Peptidase S24-like UIB01_RS21840 PF13438 Domain of unknown function (DUF4113) UIB01_RS21840 PF00817 impB/mucB/samB family UIB01_RS21840 PF11799 impB/mucB/samB family C-terminal domain UIB01_RS21840 PF11798 IMS family HHH motif UIB01_RS21845 PF00665 Integrase core domain UIB01_RS21850 PF01695 IstB-like ATP binding protein UIB01_RS21855 PF13438 Domain of unknown function (DUF4113) UIB01_RS21855 PF11799 impB/mucB/samB family C-terminal domain UIB01_RS21855 PF00817 impB/mucB/samB family UIB01_RS21865 PF00270 DEAD/DEAH box helicase UIB01_RS21865 PF17764 3′ DNA-binding domain (3′BD) UIB01_RS21865 PF18074 Primosomal protein N C-terminal domain UIB01_RS21865 PF18319 PriA DNA helicase Cys-rich region (CRR) domain UIB01_RS21885 PF09411 Lipid A 3-O-deacylase (PagL) UIB01_RS21890 PF02321 Outer membrane efflux protein UIB01_RS21895 PF00873 AcrB/AcrD/AcrF family UIB01_RS21900 PF00529 HlyD membrane-fusion protein of T1SS UIB01_RS21900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UIB01_RS21905 PF09339 IclR helix-turn-helix domain UIB01_RS21905 PF01614 Bacterial transcriptional regulator UIB01_RS22135 PF00111 2Fe-2S iron-sulfur cluster binding domain UIB01_RS22135 PF00175 Oxidoreductase NAD-binding domain UIB01_RS22135 PF00970 Oxidoreductase FAD-binding domain UIB01_RS22140 PF00355 Rieske [2Fe-2S] domain UIB01_RS22155 PF00866 Ring hydroxylating beta subunit UIB01_RS22165 PF00171 Aldehyde dehydrogenase family UIB01_RS22170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UIB01_RS22175 PF00701 Dihydrodipicolinate synthetase family UIB01_RS22180 PF01323 DSBA-like thioredoxin domain UIB01_RS22200 PF05717 IS66 Orf2 like protein UIB01_RS22220 PF01494 FAD binding domain UIB01_RS22225 PF05598 Transposase domain (DUF772) UIB01_RS22225 PF01609 Transposase DDE domain UIB01_RS22235 PF03466 LysR substrate binding domain UIB01_RS22235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UIB01_RS22240 PF01494 FAD binding domain UIB01_RS22245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UIB01_RS22250 PF00171 Aldehyde dehydrogenase family UIB01_RS22255 PF00561 alpha/beta hydrolase fold UIB01_RS22265 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation UIB01_RS22265 PF01118 Semialdehyde dehydrogenase, NAD binding domain UIB01_RS22270 PF07836 DmpG-like communication domain UIB01_RS22270 PF00682 HMGL-like UIB01_RS22280 PF01361 Tautomerase enzyme UIB01_RS22285 PF03928 Haem-degrading UIB01_RS22300 PF02913 FAD linked oxidases, C-terminal domain UIB01_RS22300 PF01565 FAD binding domain UIB01_RS22325 PF12705 PD-(D/E)XK nuclease superfamily UIB01_RS22325 PF00580 UvrD/REP helicase N-terminal domain UIB01_RS22325 PF13361 UvrD-like helicase C-terminal domain UIB01_RS22345 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system UIB01_RS22350 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin UIB01_RS22355 PF02899 Phage integrase, N-terminal SAM-like domain UIB01_RS22355 PF00589 Phage integrase family UIB01_RS22380 PF13614 AAA domain UIB01_RS22395 PF05717 IS66 Orf2 like protein UIB01_RS22400 PF13005 zinc-finger binding domain of transposase IS66 UIB01_RS22400 PF03050 Transposase IS66 family UIB01_RS22400 PF13817 IS66 C-terminal element UIB01_RS22400 PF13007 Transposase C of IS166 homeodomain UIB01_RS22455 PF01258 Prokaryotic dksA/traR C4-type zinc finger UIB01_RS22465 PF05717 IS66 Orf2 like protein UIB01_RS22490 PF01420 Type I restriction modification DNA specificity domain UIB01_RS22505 PF03472 Autoinducer binding domain UIB01_RS22505 PF00196 Bacterial regulatory proteins, luxR family UIB01_RS22520 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) UIB01_RS22520 PF00072 Response regulator receiver domain UIB01_RS22520 PF01627 Hpt domain UIB01_RS22520 PF00512 His Kinase A (phospho-acceptor) domain UIB01_RS22520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UIB01_RS22520 PF00672 HAMP domain UIB01_RS22540 PF03840 Preprotein translocase SecG subunit UIB01_RS22605 PF01679 Proteolipid membrane potential modulator UIB01_RS22690 PF04957 Ribosome modulation factor UIB01_RS22710 PF03860 Domain of Unknown Function (DUF326) UIB01_RS22760 PF01242 6-pyruvoyl tetrahydropterin synthase UIB01_RS22775 PF08042 PqqA family UIB01_RS22810 PF02810 SEC-C motif UIB01_RS22810 PF07517 SecA DEAD-like domain UIB01_RS22810 PF01043 SecA preprotein cross-linking domain UIB01_RS22810 PF07516 SecA Wing and Scaffold domain UIB01_RS22820 PF07007 Lysozyme inhibitor LprI UIB01_RS22830 PF01476 LysM domain UIB01_RS22830 PF01551 Peptidase family M23 UIB01_RS22835 PF08173 Membrane bound YbgT-like protein UIB01_RS22855 PF08401 Domain of unknown function (DUF1738) UIB01_RS22855 PF18818 Metallopeptidase superfamily domain UIB01_RS22855 PF13362 Toprim domain UIB01_RS22885 PF03869 Arc-like DNA binding domain UIB01_RS22905 PF13411 MerR HTH family regulatory protein UIB01_RS22955 PF03852 DNA mismatch endonuclease Vsr UIB01_RS23000 PF00848 Ring hydroxylating alpha subunit (catalytic domain) UIB01_RS23000 PF00355 Rieske [2Fe-2S] domain UIB01_RS23020 PF00111 2Fe-2S iron-sulfur cluster binding domain UIB01_RS23035 PF00149 Calcineurin-like phosphoesterase UIB01_RS23140 PF02675 S-adenosylmethionine decarboxylase UIB01_RS23320 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I UIB01_RS23320 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II UIB01_RS23320 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III UIB01_RS23320 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain UIB01_RS23370 PF13411 MerR HTH family regulatory protein UIB01_RS23375 PF13411 MerR HTH family regulatory protein UIB01_RS23430 PF01022 Bacterial regulatory protein, arsR family UIB01_RS23435 PF01451 Low molecular weight phosphotyrosine protein phosphatase UIB01_RS23440 PF03692 Putative zinc- or iron-chelating domain UIB01_RS23460 PF02743 Cache domain UIB01_RS23460 PF00672 HAMP domain UIB01_RS23460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UIB01_RS23510 PF00313 'Cold-shock' DNA-binding domain UIB01_RS23520 PF00027 Cyclic nucleotide-binding domain UIB01_RS23520 PF00325 Bacterial regulatory proteins, crp family UIB01_RS23540 PF05736 OprF membrane domain UIB01_RS23540 PF00691 OmpA family