locus-tag class description NDR94_RS00005 PF00308 Bacterial dnaA protein NDR94_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix NDR94_RS00005 PF11638 DnaA N-terminal domain NDR94_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NDR94_RS00010 PF02767 DNA polymerase III beta subunit, central domain NDR94_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NDR94_RS00015 PF02463 RecF/RecN/SMC N terminal domain NDR94_RS00020 PF01751 Toprim domain NDR94_RS00020 PF18053 DNA gyrase B subunit insert domain NDR94_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS00020 PF00204 DNA gyrase B NDR94_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus NDR94_RS00025 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDR94_RS00025 PF13192 Thioredoxin domain NDR94_RS00030 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS00045 PF05746 DALR anticodon binding domain NDR94_RS00045 PF02092 Glycyl-tRNA synthetase beta subunit NDR94_RS00050 PF02091 Glycyl-tRNA synthetase alpha subunit NDR94_RS00055 PF03352 Methyladenine glycosylase NDR94_RS00075 PF00005 ABC transporter NDR94_RS00080 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS00085 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS00090 PF00497 Bacterial extracellular solute-binding proteins, family 3 NDR94_RS00095 PF02080 TrkA-C domain NDR94_RS00095 PF02254 TrkA-N domain NDR94_RS00100 PF01189 16S rRNA methyltransferase RsmB/F NDR94_RS00100 PF01029 NusB family NDR94_RS00105 PF02911 Formyl transferase, C-terminal domain NDR94_RS00105 PF00551 Formyl transferase NDR94_RS00110 PF01327 Polypeptide deformylase NDR94_RS00120 PF02481 DNA recombination-mediator protein A NDR94_RS00120 PF17782 DprA winged helix domain NDR94_RS00125 PF01300 Telomere recombination NDR94_RS00130 PF08240 Alcohol dehydrogenase GroES-like domain NDR94_RS00130 PF00107 Zinc-binding dehydrogenase NDR94_RS00135 PF01218 Coproporphyrinogen III oxidase NDR94_RS00140 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NDR94_RS00140 PF01488 Shikimate / quinate 5-dehydrogenase NDR94_RS00140 PF08501 Shikimate dehydrogenase substrate binding domain NDR94_RS00155 PF00768 D-alanyl-D-alanine carboxypeptidase NDR94_RS00190 PF03180 NLPA lipoprotein NDR94_RS00195 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS00200 PF00005 ABC transporter NDR94_RS00200 PF09383 NIL domain NDR94_RS00205 PF00199 Catalase NDR94_RS00205 PF18011 C-terminal domain found in long catalases NDR94_RS00205 PF06628 Catalase-related immune-responsive NDR94_RS00210 PF01863 Protein of unknown function DUF45 NDR94_RS00215 PF00950 ABC 3 transport family NDR94_RS00220 PF00005 ABC transporter NDR94_RS00225 PF01475 Ferric uptake regulator family NDR94_RS00230 PF01297 Zinc-uptake complex component A periplasmic NDR94_RS00235 PF00202 Aminotransferase class-III NDR94_RS00240 PF00171 Aldehyde dehydrogenase family NDR94_RS00245 PF00535 Glycosyl transferase family 2 NDR94_RS00260 PF00486 Transcriptional regulatory protein, C terminal NDR94_RS00260 PF00072 Response regulator receiver domain NDR94_RS00265 PF18698 Histidine kinase sensor domain NDR94_RS00265 PF00672 HAMP domain NDR94_RS00265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS00265 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS00265 PF00989 PAS fold NDR94_RS00270 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS00270 PF00072 Response regulator receiver domain NDR94_RS00275 PF00072 Response regulator receiver domain NDR94_RS00275 PF00486 Transcriptional regulatory protein, C terminal NDR94_RS00280 PF00989 PAS fold NDR94_RS00280 PF16736 Single Cache-like NDR94_RS00280 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS00280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS00285 PF00486 Transcriptional regulatory protein, C terminal NDR94_RS00285 PF00072 Response regulator receiver domain NDR94_RS00290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS00290 PF00989 PAS fold NDR94_RS00290 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS00300 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS00300 PF07694 5TMR of 5TMR-LYT NDR94_RS00310 PF04371 Porphyromonas-type peptidyl-arginine deiminase NDR94_RS00315 PF00795 Carbon-nitrogen hydrolase NDR94_RS00325 PF00120 Glutamine synthetase, catalytic domain NDR94_RS00330 PF07722 Peptidase C26 NDR94_RS00335 PF00120 Glutamine synthetase, catalytic domain NDR94_RS00340 PF00202 Aminotransferase class-III NDR94_RS00345 PF13416 Bacterial extracellular solute-binding protein NDR94_RS00355 PF13416 Bacterial extracellular solute-binding protein NDR94_RS00360 PF00005 ABC transporter NDR94_RS00360 PF08402 TOBE domain NDR94_RS00365 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS00370 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS00380 PF12697 Alpha/beta hydrolase family NDR94_RS00395 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NDR94_RS00400 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component NDR94_RS00405 PF03480 Bacterial extracellular solute-binding protein, family 7 NDR94_RS00410 PF02954 Bacterial regulatory protein, Fis family NDR94_RS00410 PF00158 Sigma-54 interaction domain NDR94_RS00410 PF00072 Response regulator receiver domain NDR94_RS00415 PF02743 Cache domain NDR94_RS00415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS00415 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS00420 PF04321 RmlD substrate binding domain NDR94_RS00425 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NDR94_RS00430 PF00483 Nucleotidyl transferase NDR94_RS00435 PF16363 GDP-mannose 4,6 dehydratase NDR94_RS00445 PF00005 ABC transporter NDR94_RS00450 PF13533 Biotin-lipoyl like NDR94_RS00465 PF00005 ABC transporter NDR94_RS00470 PF02405 Permease MlaE NDR94_RS00475 PF00199 Catalase NDR94_RS00490 PF01292 Prokaryotic cytochrome b561 NDR94_RS00495 PF01322 Cytochrome C' NDR94_RS00500 PF00171 Aldehyde dehydrogenase family NDR94_RS00505 PF00072 Response regulator receiver domain NDR94_RS00505 PF00486 Transcriptional regulatory protein, C terminal NDR94_RS00510 PF00378 Enoyl-CoA hydratase/isomerase NDR94_RS00510 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NDR94_RS00510 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NDR94_RS00515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NDR94_RS00515 PF02770 Acyl-CoA dehydrogenase, middle domain NDR94_RS00515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NDR94_RS00520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NDR94_RS00520 PF02770 Acyl-CoA dehydrogenase, middle domain NDR94_RS00520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NDR94_RS00525 PF07690 Major Facilitator Superfamily NDR94_RS00540 PF09339 IclR helix-turn-helix domain NDR94_RS00545 PF13193 AMP-binding enzyme C-terminal domain NDR94_RS00545 PF00501 AMP-binding enzyme NDR94_RS00550 PF00830 Ribosomal L28 family NDR94_RS00555 PF00471 Ribosomal protein L33 NDR94_RS00570 PF03641 Possible lysine decarboxylase NDR94_RS00570 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases NDR94_RS00570 PF11892 Domain of unknown function (DUF3412) NDR94_RS00575 PF01636 Phosphotransferase enzyme family NDR94_RS00585 PF01612 3'-5' exonuclease NDR94_RS00585 PF00476 DNA polymerase family A NDR94_RS00585 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NDR94_RS00585 PF01367 5'-3' exonuclease, C-terminal SAM fold NDR94_RS00615 PF12833 Helix-turn-helix domain NDR94_RS00615 PF02311 AraC-like ligand binding domain NDR94_RS00620 PF13593 SBF-like CPA transporter family (DUF4137) NDR94_RS00625 PF02525 Flavodoxin-like fold NDR94_RS00630 PF02233 NAD(P) transhydrogenase beta subunit NDR94_RS00635 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NDR94_RS00640 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NDR94_RS00640 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NDR94_RS00650 PF00437 Type II/IV secretion system protein NDR94_RS00655 PF00482 Type II secretion system (T2SS), protein F NDR94_RS00660 PF07963 Prokaryotic N-terminal methylation motif NDR94_RS00660 PF08334 Type II secretion system (T2SS), protein G NDR94_RS00665 PF12019 Type II transport protein GspH NDR94_RS00665 PF07963 Prokaryotic N-terminal methylation motif NDR94_RS00670 PF07963 Prokaryotic N-terminal methylation motif NDR94_RS00670 PF02501 Type II secretion system (T2SS), protein I NDR94_RS00675 PF07963 Prokaryotic N-terminal methylation motif NDR94_RS00675 PF11612 Type II secretion system (T2SS), protein J NDR94_RS00680 PF03934 Type II secretion system (T2SS), protein K NDR94_RS00685 PF05134 Type II secretion system (T2SS), protein L NDR94_RS00685 PF12693 GspL periplasmic domain NDR94_RS00700 PF17191 RecG wedge domain NDR94_RS00700 PF00270 DEAD/DEAH box helicase NDR94_RS00700 PF00271 Helicase conserved C-terminal domain NDR94_RS00705 PF03466 LysR substrate binding domain NDR94_RS00705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS00715 PF08240 Alcohol dehydrogenase GroES-like domain NDR94_RS00715 PF13823 Alcohol dehydrogenase GroES-associated NDR94_RS00715 PF00107 Zinc-binding dehydrogenase NDR94_RS00730 PF05175 Methyltransferase small domain NDR94_RS00745 PF10282 Lactonase, 7-bladed beta-propeller NDR94_RS00750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NDR94_RS00750 PF02770 Acyl-CoA dehydrogenase, middle domain NDR94_RS00750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NDR94_RS00755 PF00072 Response regulator receiver domain NDR94_RS00755 PF13426 PAS domain NDR94_RS00755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS00770 PF07715 TonB-dependent Receptor Plug Domain NDR94_RS00770 PF00593 TonB dependent receptor NDR94_RS00780 PF03795 YCII-related domain NDR94_RS00785 PF04542 Sigma-70 region 2 NDR94_RS00785 PF08281 Sigma-70, region 4 NDR94_RS00790 PF00158 Sigma-54 interaction domain NDR94_RS00790 PF02954 Bacterial regulatory protein, Fis family NDR94_RS00790 PF00072 Response regulator receiver domain NDR94_RS00795 PF02743 Cache domain NDR94_RS00795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS00795 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS00800 PF11871 Domain of unknown function (DUF3391) NDR94_RS00800 PF01966 HD domain NDR94_RS00805 PF01740 STAS domain NDR94_RS00805 PF00916 Sulfate permease family NDR94_RS00810 PF00582 Universal stress protein family NDR94_RS00825 PF01597 Glycine cleavage H-protein NDR94_RS00845 PF03144 Elongation factor Tu domain 2 NDR94_RS00845 PF09106 Elongation factor SelB, winged helix NDR94_RS00845 PF09107 Elongation factor SelB, winged helix NDR94_RS00845 PF00009 Elongation factor Tu GTP binding domain NDR94_RS00850 PF03841 L-seryl-tRNA selenium transferase NDR94_RS00850 PF12390 Selenocysteine synthase N terminal NDR94_RS00855 PF04216 Protein involved in formate dehydrogenase formation NDR94_RS00860 PF01292 Prokaryotic cytochrome b561 NDR94_RS00865 PF09163 Formate dehydrogenase N, transmembrane NDR94_RS00865 PF13247 4Fe-4S dicluster domain NDR94_RS00875 PF12852 Cupin NDR94_RS00875 PF12833 Helix-turn-helix domain NDR94_RS00880 PF02566 OsmC-like protein NDR94_RS00885 PF00561 alpha/beta hydrolase fold NDR94_RS00895 PF03480 Bacterial extracellular solute-binding protein, family 7 NDR94_RS00900 PF13361 UvrD-like helicase C-terminal domain NDR94_RS00900 PF00580 UvrD/REP helicase N-terminal domain NDR94_RS00905 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS00905 PF00563 EAL domain NDR94_RS00905 PF03707 Bacterial signalling protein N terminal repeat NDR94_RS00910 PF16325 Peptidase family U32 C-terminal domain NDR94_RS00910 PF01136 Peptidase family U32 NDR94_RS00915 PF04325 Protein of unknown function (DUF465) NDR94_RS00920 PF13840 ACT domain NDR94_RS00920 PF00696 Amino acid kinase family NDR94_RS00925 PF05721 Phytanoyl-CoA dioxygenase (PhyH) NDR94_RS00930 PF06339 Ectoine synthase NDR94_RS00935 PF00202 Aminotransferase class-III NDR94_RS00940 PF00583 Acetyltransferase (GNAT) family NDR94_RS00945 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NDR94_RS00945 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NDR94_RS00950 PF01380 SIS domain NDR94_RS00950 PF01418 Helix-turn-helix domain, rpiR family NDR94_RS00950 PF02685 Glucokinase NDR94_RS00960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS00960 PF03466 LysR substrate binding domain NDR94_RS00965 PF02785 Biotin carboxylase C-terminal domain NDR94_RS00965 PF00289 Biotin carboxylase, N-terminal domain NDR94_RS00965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NDR94_RS00970 PF00682 HMGL-like NDR94_RS00970 PF00364 Biotin-requiring enzyme NDR94_RS00970 PF02436 Conserved carboxylase domain NDR94_RS00985 PF04960 Glutaminase NDR94_RS00990 PF00484 Carbonic anhydrase NDR94_RS01000 PF17763 Glutaminase/Asparaginase C-terminal domain NDR94_RS01000 PF00710 Asparaginase, N-terminal NDR94_RS01005 PF01235 Sodium:alanine symporter family NDR94_RS01015 PF00375 Sodium:dicarboxylate symporter family NDR94_RS01020 PF10415 Fumarase C C-terminus NDR94_RS01020 PF00206 Lyase NDR94_RS01025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS01025 PF03466 LysR substrate binding domain NDR94_RS01030 PF13193 AMP-binding enzyme C-terminal domain NDR94_RS01030 PF00501 AMP-binding enzyme NDR94_RS01035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NDR94_RS01035 PF01261 Xylose isomerase-like TIM barrel NDR94_RS01040 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS01040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS01045 PF00731 AIR carboxylase NDR94_RS01050 PF02222 ATP-grasp domain NDR94_RS01050 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NDR94_RS01070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NDR94_RS01070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NDR94_RS01075 PF12857 TOBE-like domain NDR94_RS01075 PF00005 ABC transporter NDR94_RS01080 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS01085 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS01095 PF10055 Uncharacterized small protein (DUF2292) NDR94_RS01105 PF10417 C-terminal domain of 1-Cys peroxiredoxin NDR94_RS01105 PF00578 AhpC/TSA family NDR94_RS01125 PF14864 Alkyl sulfatase C-terminal NDR94_RS01125 PF14863 Alkyl sulfatase dimerisation NDR94_RS01125 PF00753 Metallo-beta-lactamase superfamily NDR94_RS01130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS01130 PF03466 LysR substrate binding domain NDR94_RS01135 PF07044 Protein of unknown function (DUF1329) NDR94_RS01145 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NDR94_RS01145 PF12833 Helix-turn-helix domain NDR94_RS01170 PF02796 Helix-turn-helix domain of resolvase NDR94_RS01170 PF00239 Resolvase, N terminal domain NDR94_RS01180 PF16916 Dimerisation domain of Zinc Transporter NDR94_RS01180 PF01545 Cation efflux family NDR94_RS01205 PF03773 Predicted permease NDR94_RS01215 PF01758 Sodium Bile acid symporter family NDR94_RS01225 PF02374 Anion-transporting ATPase NDR94_RS01230 PF06953 Arsenical resistance operon trans-acting repressor ArsD NDR94_RS01240 PF01451 Low molecular weight phosphotyrosine protein phosphatase NDR94_RS01245 PF01022 Bacterial regulatory protein, arsR family NDR94_RS01250 PF00239 Resolvase, N terminal domain NDR94_RS01250 PF02796 Helix-turn-helix domain of resolvase NDR94_RS01260 PF00665 Integrase core domain NDR94_RS01265 PF01695 IstB-like ATP binding protein NDR94_RS01280 PF09722 Protein of unknown function (DUF2384) NDR94_RS01305 PF12161 HsdM N-terminal domain NDR94_RS01305 PF02384 N-6 DNA Methylase NDR94_RS01335 PF00665 Integrase core domain NDR94_RS01335 PF13936 Helix-turn-helix domain NDR94_RS01355 PF13356 Arm DNA-binding domain NDR94_RS01355 PF14659 Phage integrase, N-terminal SAM-like domain NDR94_RS01355 PF00589 Phage integrase family NDR94_RS01370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NDR94_RS01380 PF03480 Bacterial extracellular solute-binding protein, family 7 NDR94_RS01385 PF02566 OsmC-like protein NDR94_RS01395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS01395 PF08448 PAS fold NDR94_RS01395 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS01395 PF00072 Response regulator receiver domain NDR94_RS01395 PF13188 PAS domain NDR94_RS01400 PF01471 Putative peptidoglycan binding domain NDR94_RS01400 PF03734 L,D-transpeptidase catalytic domain NDR94_RS01410 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NDR94_RS01410 PF00437 Type II/IV secretion system protein NDR94_RS01420 PF01865 Protein of unknown function DUF47 NDR94_RS01425 PF01384 Phosphate transporter family NDR94_RS01430 PF07687 Peptidase dimerisation domain NDR94_RS01430 PF01546 Peptidase family M20/M25/M40 NDR94_RS01435 PF00696 Amino acid kinase family NDR94_RS01435 PF00583 Acetyltransferase (GNAT) family NDR94_RS01440 PF04262 Glutamate-cysteine ligase NDR94_RS01450 PF00575 S1 RNA binding domain NDR94_RS01450 PF09371 Tex-like protein N-terminal domain NDR94_RS01450 PF17674 HHH domain NDR94_RS01450 PF16921 Tex protein YqgF-like domain NDR94_RS01455 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) NDR94_RS01460 PF03170 Bacterial cellulose synthase subunit NDR94_RS01465 PF00535 Glycosyl transferase family 2 NDR94_RS01465 PF03552 Cellulose synthase NDR94_RS01465 PF07238 PilZ domain NDR94_RS01470 PF06564 Cellulose biosynthesis protein BcsQ NDR94_RS01480 PF11658 Cellulose biosynthesis protein BcsG NDR94_RS01490 PF10995 Cellulose biosynthesis GIL NDR94_RS01495 PF01219 Prokaryotic diacylglycerol kinase NDR94_RS01500 PF00486 Transcriptional regulatory protein, C terminal NDR94_RS01500 PF00072 Response regulator receiver domain NDR94_RS01505 PF00672 HAMP domain NDR94_RS01505 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS01505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS01510 PF18030 RimK PreATP-grasp domain NDR94_RS01510 PF08443 RimK-like ATP-grasp domain NDR94_RS01515 PF18030 RimK PreATP-grasp domain NDR94_RS01515 PF08443 RimK-like ATP-grasp domain NDR94_RS01520 PF01479 S4 domain NDR94_RS01530 PF01430 Hsp33 protein NDR94_RS01535 PF01293 Phosphoenolpyruvate carboxykinase NDR94_RS01540 PF00881 Nitroreductase family NDR94_RS01550 PF16124 RecQ zinc-binding NDR94_RS01550 PF00270 DEAD/DEAH box helicase NDR94_RS01550 PF00271 Helicase conserved C-terminal domain NDR94_RS01550 PF09382 RQC domain NDR94_RS01550 PF00570 HRDC domain NDR94_RS01555 PF00672 HAMP domain NDR94_RS01555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS01555 PF13426 PAS domain NDR94_RS01565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS01565 PF00672 HAMP domain NDR94_RS01570 PF00248 Aldo/keto reductase family NDR94_RS01595 PF13426 PAS domain NDR94_RS01595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS01595 PF00072 Response regulator receiver domain NDR94_RS01600 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS01600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS01610 PF13581 Histidine kinase-like ATPase domain NDR94_RS01615 PF01740 STAS domain NDR94_RS01620 PF01740 STAS domain NDR94_RS01620 PF08678 Rsbr N terminal NDR94_RS01625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS01625 PF03466 LysR substrate binding domain NDR94_RS01630 PF00378 Enoyl-CoA hydratase/isomerase NDR94_RS01630 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NDR94_RS01630 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NDR94_RS01635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NDR94_RS01635 PF12806 Acetyl-CoA dehydrogenase C-terminal like NDR94_RS01635 PF02770 Acyl-CoA dehydrogenase, middle domain NDR94_RS01635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NDR94_RS01640 PF00465 Iron-containing alcohol dehydrogenase NDR94_RS01655 PF02634 FdhD/NarQ family NDR94_RS01660 PF00072 Response regulator receiver domain NDR94_RS01660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS01660 PF13426 PAS domain NDR94_RS01665 PF13419 Haloacid dehalogenase-like hydrolase NDR94_RS01670 PF00293 NUDIX domain NDR94_RS01675 PF00459 Inositol monophosphatase family NDR94_RS01690 PF00343 Carbohydrate phosphorylase NDR94_RS01695 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NDR94_RS01720 PF00561 alpha/beta hydrolase fold NDR94_RS01725 PF02580 D-Tyr-tRNA(Tyr) deacylase NDR94_RS01730 PF03682 Uncharacterised protein family (UPF0158) NDR94_RS01740 PF00902 Sec-independent protein translocase protein (TatC) NDR94_RS01745 PF02416 mttA/Hcf106 family NDR94_RS01750 PF02416 mttA/Hcf106 family NDR94_RS01755 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NDR94_RS01760 PF01502 Phosphoribosyl-AMP cyclohydrolase NDR94_RS01765 PF03109 ABC1 family NDR94_RS01775 PF01209 ubiE/COQ5 methyltransferase family NDR94_RS01785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS01785 PF16591 Helical bimodular sensor domain NDR94_RS01785 PF00672 HAMP domain NDR94_RS01795 PF00004 ATPase family associated with various cellular activities (AAA) NDR94_RS01795 PF07724 AAA domain (Cdc48 subfamily) NDR94_RS01800 PF00227 Proteasome subunit NDR94_RS01805 PF00384 Molybdopterin oxidoreductase NDR94_RS01810 PF00588 SpoU rRNA Methylase family NDR94_RS01820 PF00158 Sigma-54 interaction domain NDR94_RS01820 PF00072 Response regulator receiver domain NDR94_RS01820 PF02954 Bacterial regulatory protein, Fis family NDR94_RS01825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS01825 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS01825 PF00989 PAS fold NDR94_RS01840 PF03951 Glutamine synthetase, beta-Grasp domain NDR94_RS01840 PF00120 Glutamine synthetase, catalytic domain NDR94_RS01845 PF02926 THUMP domain NDR94_RS01845 PF02568 Thiamine biosynthesis protein (ThiI) NDR94_RS01850 PF00009 Elongation factor Tu GTP binding domain NDR94_RS01850 PF00679 Elongation factor G C-terminus NDR94_RS01850 PF03144 Elongation factor Tu domain 2 NDR94_RS01855 PF00672 HAMP domain NDR94_RS01855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS01860 PF03390 2-hydroxycarboxylate transporter family NDR94_RS01865 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NDR94_RS01865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS01865 PF00989 PAS fold NDR94_RS01865 PF17203 Single cache domain 3 NDR94_RS01870 PF00072 Response regulator receiver domain NDR94_RS01880 PF12697 Alpha/beta hydrolase family NDR94_RS01890 PF13188 PAS domain NDR94_RS01890 PF00072 Response regulator receiver domain NDR94_RS01890 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS01890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS01890 PF08448 PAS fold NDR94_RS01895 PF02954 Bacterial regulatory protein, Fis family NDR94_RS01895 PF00158 Sigma-54 interaction domain NDR94_RS01895 PF00072 Response regulator receiver domain NDR94_RS01900 PF07308 Protein of unknown function (DUF1456) NDR94_RS01910 PF00034 Cytochrome c NDR94_RS01925 PF00563 EAL domain NDR94_RS01925 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS01930 PF13416 Bacterial extracellular solute-binding protein NDR94_RS01935 PF01738 Dienelactone hydrolase family NDR94_RS01935 PF00156 Phosphoribosyl transferase domain NDR94_RS01940 PF00156 Phosphoribosyl transferase domain NDR94_RS01940 PF01738 Dienelactone hydrolase family NDR94_RS01950 PF02374 Anion-transporting ATPase NDR94_RS01960 PF02554 Carbon starvation protein CstA NDR94_RS01960 PF13722 5TM C-terminal transporter carbon starvation CstA NDR94_RS01975 PF03334 Na+/H+ antiporter subunit NDR94_RS01990 PF00361 Proton-conducting membrane transporter NDR94_RS01990 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NDR94_RS01995 PF00361 Proton-conducting membrane transporter NDR94_RS02000 PF00361 Proton-conducting membrane transporter NDR94_RS02005 PF00672 HAMP domain NDR94_RS02005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS02015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS02020 PF00486 Transcriptional regulatory protein, C terminal NDR94_RS02020 PF00072 Response regulator receiver domain NDR94_RS02045 PF00196 Bacterial regulatory proteins, luxR family NDR94_RS02045 PF00072 Response regulator receiver domain NDR94_RS02070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NDR94_RS02070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NDR94_RS02075 PF02913 FAD linked oxidases, C-terminal domain NDR94_RS02075 PF01565 FAD binding domain NDR94_RS02080 PF01557 Fumarylacetoacetate (FAA) hydrolase family NDR94_RS02085 PF06977 SdiA-regulated NDR94_RS02095 PF07411 Domain of unknown function (DUF1508) NDR94_RS02100 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NDR94_RS02105 PF00291 Pyridoxal-phosphate dependent enzyme NDR94_RS02105 PF00585 C-terminal regulatory domain of Threonine dehydratase NDR94_RS02125 PF00293 NUDIX domain NDR94_RS02130 PF02896 PEP-utilising enzyme, TIM barrel domain NDR94_RS02130 PF00391 PEP-utilising enzyme, mobile domain NDR94_RS02130 PF01590 GAF domain NDR94_RS02130 PF05524 PEP-utilising enzyme, N-terminal NDR94_RS02140 PF01925 Sulfite exporter TauE/SafE NDR94_RS02145 PF01790 Prolipoprotein diacylglyceryl transferase NDR94_RS02150 PF00303 Thymidylate synthase NDR94_RS02155 PF13614 AAA domain NDR94_RS02165 PF02653 Branched-chain amino acid transport system / permease component NDR94_RS02170 PF00005 ABC transporter NDR94_RS02175 PF12399 Branched-chain amino acid ATP-binding cassette transporter NDR94_RS02175 PF00005 ABC transporter NDR94_RS02190 PF00072 Response regulator receiver domain NDR94_RS02195 PF01476 LysM domain NDR94_RS02195 PF08525 Opacity-associated protein A N-terminal motif NDR94_RS02195 PF01551 Peptidase family M23 NDR94_RS02205 PF01595 Cyclin M transmembrane N-terminal domain NDR94_RS02205 PF03471 Transporter associated domain NDR94_RS02205 PF00571 CBS domain NDR94_RS02210 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS02210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS02210 PF11808 Phosphate regulon sensor protein PhoR NDR94_RS02210 PF00989 PAS fold NDR94_RS02215 PF00486 Transcriptional regulatory protein, C terminal NDR94_RS02215 PF00072 Response regulator receiver domain NDR94_RS02220 PF01040 UbiA prenyltransferase family NDR94_RS02225 PF04345 Chorismate lyase NDR94_RS02230 PF00392 Bacterial regulatory proteins, gntR family NDR94_RS02230 PF07729 FCD domain NDR94_RS02235 PF02913 FAD linked oxidases, C-terminal domain NDR94_RS02235 PF01565 FAD binding domain NDR94_RS02240 PF01565 FAD binding domain NDR94_RS02245 PF13183 4Fe-4S dicluster domain NDR94_RS02245 PF02754 Cysteine-rich domain NDR94_RS02250 PF03928 Haem-degrading NDR94_RS02255 PF01274 Malate synthase NDR94_RS02260 PF02652 L-lactate permease NDR94_RS02265 PF00301 Rubredoxin NDR94_RS02270 PF18113 Rubredoxin binding C-terminal domain NDR94_RS02270 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDR94_RS02275 PF00216 Bacterial DNA-binding protein NDR94_RS02285 PF03466 LysR substrate binding domain NDR94_RS02285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS02290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NDR94_RS02290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NDR94_RS02290 PF02770 Acyl-CoA dehydrogenase, middle domain NDR94_RS02295 PF02515 CoA-transferase family III NDR94_RS02300 PF08240 Alcohol dehydrogenase GroES-like domain NDR94_RS02300 PF00107 Zinc-binding dehydrogenase NDR94_RS02310 PF04011 LemA family NDR94_RS02315 PF04536 TPM domain NDR94_RS02330 PF02311 AraC-like ligand binding domain NDR94_RS02330 PF12833 Helix-turn-helix domain NDR94_RS02335 PF00004 ATPase family associated with various cellular activities (AAA) NDR94_RS02335 PF17862 AAA+ lid domain NDR94_RS02335 PF01434 Peptidase family M41 NDR94_RS02345 PF00034 Cytochrome c NDR94_RS02345 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NDR94_RS02350 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NDR94_RS02355 PF00111 2Fe-2S iron-sulfur cluster binding domain NDR94_RS02355 PF01799 [2Fe-2S] binding domain NDR94_RS02370 PF01042 Endoribonuclease L-PSP NDR94_RS02375 PF13291 ACT domain NDR94_RS02375 PF02824 TGS domain NDR94_RS02375 PF04607 Region found in RelA / SpoT proteins NDR94_RS02380 PF01192 RNA polymerase Rpb6 NDR94_RS02385 PF00625 Guanylate kinase NDR94_RS02390 PF03755 YicC-like family, N-terminal region NDR94_RS02390 PF08340 Domain of unknown function (DUF1732) NDR94_RS02395 PF03725 3' exoribonuclease family, domain 2 NDR94_RS02395 PF01138 3' exoribonuclease family, domain 1 NDR94_RS02405 PF03372 Endonuclease/Exonuclease/phosphatase family NDR94_RS02410 PF00156 Phosphoribosyl transferase domain NDR94_RS02425 PF00696 Amino acid kinase family NDR94_RS02430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NDR94_RS02430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NDR94_RS02430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NDR94_RS02430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NDR94_RS02435 PF00692 dUTPase NDR94_RS02440 PF02441 Flavoprotein NDR94_RS02440 PF04127 DNA / pantothenate metabolism flavoprotein NDR94_RS02445 PF04002 RadC-like JAB domain NDR94_RS02460 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NDR94_RS02460 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NDR94_RS02460 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain NDR94_RS02465 PF02743 Cache domain NDR94_RS02465 PF00672 HAMP domain NDR94_RS02465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS02480 PF13091 PLD-like domain NDR94_RS02485 PF01266 FAD dependent oxidoreductase NDR94_RS02490 PF01037 Lrp/AsnC ligand binding domain NDR94_RS02495 PF01266 FAD dependent oxidoreductase NDR94_RS02500 PF01042 Endoribonuclease L-PSP NDR94_RS02510 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NDR94_RS02520 PF00156 Phosphoribosyl transferase domain NDR94_RS02530 PF16657 Maltogenic Amylase, C-terminal domain NDR94_RS02530 PF00128 Alpha amylase, catalytic domain NDR94_RS02535 PF00128 Alpha amylase, catalytic domain NDR94_RS02540 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NDR94_RS02540 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NDR94_RS02550 PF00465 Iron-containing alcohol dehydrogenase NDR94_RS02555 PF00171 Aldehyde dehydrogenase family NDR94_RS02560 PF09339 IclR helix-turn-helix domain NDR94_RS02560 PF01614 Bacterial transcriptional regulator NDR94_RS02565 PF03006 Haemolysin-III related NDR94_RS02570 PF00580 UvrD/REP helicase N-terminal domain NDR94_RS02570 PF13361 UvrD-like helicase C-terminal domain NDR94_RS02575 PF03707 Bacterial signalling protein N terminal repeat NDR94_RS02575 PF00563 EAL domain NDR94_RS02575 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS02580 PF02028 BCCT, betaine/carnitine/choline family transporter NDR94_RS02585 PF01078 Magnesium chelatase, subunit ChlI NDR94_RS02585 PF13335 Magnesium chelatase, subunit ChlI C-terminal NDR94_RS02595 PF00543 Nitrogen regulatory protein P-II NDR94_RS02600 PF00909 Ammonium Transporter Family NDR94_RS02605 PF00909 Ammonium Transporter Family NDR94_RS02610 PF01894 Uncharacterised protein family UPF0047 NDR94_RS02620 PF13419 Haloacid dehalogenase-like hydrolase NDR94_RS02625 PF02899 Phage integrase, N-terminal SAM-like domain NDR94_RS02625 PF00589 Phage integrase family NDR94_RS02635 PF01678 Diaminopimelate epimerase NDR94_RS02640 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NDR94_RS02640 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NDR94_RS02645 PF13627 Prokaryotic lipoprotein-attachment site NDR94_RS02650 PF01491 Frataxin-like domain NDR94_RS02655 PF01272 Transcription elongation factor, GreA/GreB, C-term NDR94_RS02655 PF14760 Rnk N-terminus NDR94_RS02665 PF01295 Adenylate cyclase, class-I NDR94_RS02665 PF12633 Adenylate cyclase NT domain NDR94_RS02690 PF14698 Argininosuccinate lyase C-terminal NDR94_RS02690 PF00206 Lyase NDR94_RS02695 PF07694 5TMR of 5TMR-LYT NDR94_RS02695 PF06580 Histidine kinase NDR94_RS02700 PF04397 LytTr DNA-binding domain NDR94_RS02700 PF00072 Response regulator receiver domain NDR94_RS02705 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NDR94_RS02705 PF03900 Porphobilinogen deaminase, C-terminal domain NDR94_RS02710 PF02602 Uroporphyrinogen-III synthase HemD NDR94_RS02725 PF02600 Disulfide bond formation protein DsbB NDR94_RS02730 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ NDR94_RS02745 PF12848 ABC transporter NDR94_RS02745 PF00005 ABC transporter NDR94_RS02755 PF03741 Integral membrane protein TerC family NDR94_RS02760 PF01810 LysE type translocator NDR94_RS02765 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NDR94_RS02770 PF00563 EAL domain NDR94_RS02770 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS02770 PF03707 Bacterial signalling protein N terminal repeat NDR94_RS02775 PF03061 Thioesterase superfamily NDR94_RS02785 PF00490 Delta-aminolevulinic acid dehydratase NDR94_RS02790 PF17941 Polyphosphate kinase C-terminal domain 1 NDR94_RS02790 PF02503 Polyphosphate kinase middle domain NDR94_RS02790 PF13090 Polyphosphate kinase C-terminal domain 2 NDR94_RS02790 PF13089 Polyphosphate kinase N-terminal domain NDR94_RS02795 PF02541 Ppx/GppA phosphatase family NDR94_RS02800 PF00085 Thioredoxin NDR94_RS02805 PF07497 Rho termination factor, RNA-binding domain NDR94_RS02805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NDR94_RS02805 PF07498 Rho termination factor, N-terminal domain NDR94_RS02810 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NDR94_RS02815 PF00175 Oxidoreductase NAD-binding domain NDR94_RS02825 PF00750 tRNA synthetases class I (R) NDR94_RS02825 PF03485 Arginyl tRNA synthetase N terminal domain NDR94_RS02825 PF05746 DALR anticodon binding domain NDR94_RS02830 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NDR94_RS02830 PF18074 Primosomal protein N C-terminal domain NDR94_RS02830 PF17764 3′ DNA-binding domain (3′BD) NDR94_RS02830 PF00271 Helicase conserved C-terminal domain NDR94_RS02830 PF00270 DEAD/DEAH box helicase NDR94_RS02835 PF01197 Ribosomal protein L31 NDR94_RS02845 PF03949 Malic enzyme, NAD binding domain NDR94_RS02845 PF00390 Malic enzyme, N-terminal domain NDR94_RS02850 PF17092 Penicillin-binding protein OB-like domain NDR94_RS02850 PF00905 Penicillin binding protein transpeptidase domain NDR94_RS02850 PF00912 Transglycosylase NDR94_RS02870 PF05137 Fimbrial assembly protein (PilN) NDR94_RS02875 PF04350 Pilus assembly protein, PilO NDR94_RS02880 PF04351 Pilus assembly protein, PilP NDR94_RS02885 PF00263 Bacterial type II and III secretion system protein NDR94_RS02885 PF07660 Secretin and TonB N terminus short domain NDR94_RS02885 PF11741 AMIN domain NDR94_RS02885 PF03958 Bacterial type II/III secretion system short domain NDR94_RS02890 PF01202 Shikimate kinase NDR94_RS02895 PF01761 3-dehydroquinate synthase NDR94_RS02900 PF05036 Sporulation related domain NDR94_RS02905 PF04898 Glutamate synthase central domain NDR94_RS02905 PF01645 Conserved region in glutamate synthase NDR94_RS02905 PF00310 Glutamine amidotransferases class-II NDR94_RS02905 PF01493 GXGXG motif NDR94_RS02910 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDR94_RS02910 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NDR94_RS02915 PF01208 Uroporphyrinogen decarboxylase (URO-D) NDR94_RS02920 PF07690 Major Facilitator Superfamily NDR94_RS02925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS02925 PF03466 LysR substrate binding domain NDR94_RS02935 PF00085 Thioredoxin NDR94_RS02940 PF01053 Cys/Met metabolism PLP-dependent enzyme NDR94_RS02945 PF03600 Citrate transporter NDR94_RS02945 PF02080 TrkA-C domain NDR94_RS02985 PF02600 Disulfide bond formation protein DsbB NDR94_RS03010 PF00665 Integrase core domain NDR94_RS03015 PF01695 IstB-like ATP binding protein NDR94_RS03020 PF08482 ATP-dependent helicase C-terminal NDR94_RS03020 PF00271 Helicase conserved C-terminal domain NDR94_RS03020 PF04408 Helicase associated domain (HA2) NDR94_RS03020 PF00270 DEAD/DEAH box helicase NDR94_RS03025 PF04408 Helicase associated domain (HA2) NDR94_RS03025 PF00271 Helicase conserved C-terminal domain NDR94_RS03025 PF08482 ATP-dependent helicase C-terminal NDR94_RS03025 PF00270 DEAD/DEAH box helicase NDR94_RS03065 PF01048 Phosphorylase superfamily NDR94_RS03100 PF01695 IstB-like ATP binding protein NDR94_RS03105 PF00665 Integrase core domain NDR94_RS03120 PF00501 AMP-binding enzyme NDR94_RS03120 PF13193 AMP-binding enzyme C-terminal domain NDR94_RS03125 PF00106 short chain dehydrogenase NDR94_RS03130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NDR94_RS03130 PF02770 Acyl-CoA dehydrogenase, middle domain NDR94_RS03130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NDR94_RS03140 PF00378 Enoyl-CoA hydratase/isomerase NDR94_RS03145 PF00171 Aldehyde dehydrogenase family NDR94_RS03155 PF02515 CoA-transferase family III NDR94_RS03160 PF00732 GMC oxidoreductase NDR94_RS03160 PF05199 GMC oxidoreductase NDR94_RS03165 PF12833 Helix-turn-helix domain NDR94_RS03165 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NDR94_RS03170 PF14864 Alkyl sulfatase C-terminal NDR94_RS03170 PF00753 Metallo-beta-lactamase superfamily NDR94_RS03170 PF14863 Alkyl sulfatase dimerisation NDR94_RS03180 PF07044 Protein of unknown function (DUF1329) NDR94_RS03185 PF14870 Photosynthesis system II assembly factor YCF48 NDR94_RS03220 PF00501 AMP-binding enzyme NDR94_RS03230 PF07804 HipA-like C-terminal domain NDR94_RS03230 PF13657 HipA N-terminal domain NDR94_RS03265 PF01420 Type I restriction modification DNA specificity domain NDR94_RS03270 PF02384 N-6 DNA Methylase NDR94_RS03285 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NDR94_RS03285 PF04851 Type III restriction enzyme, res subunit NDR94_RS03285 PF08463 EcoEI R protein C-terminal NDR94_RS03285 PF00271 Helicase conserved C-terminal domain NDR94_RS03305 PF03050 Transposase IS66 family NDR94_RS03305 PF13007 Transposase C of IS166 homeodomain NDR94_RS03305 PF13005 zinc-finger binding domain of transposase IS66 NDR94_RS03305 PF13817 IS66 C-terminal element NDR94_RS03345 PF00665 Integrase core domain NDR94_RS03350 PF01695 IstB-like ATP binding protein NDR94_RS03360 PF13005 zinc-finger binding domain of transposase IS66 NDR94_RS03360 PF13007 Transposase C of IS166 homeodomain NDR94_RS03360 PF13817 IS66 C-terminal element NDR94_RS03360 PF03050 Transposase IS66 family NDR94_RS03380 PF02384 N-6 DNA Methylase NDR94_RS03395 PF13005 zinc-finger binding domain of transposase IS66 NDR94_RS03395 PF13817 IS66 C-terminal element NDR94_RS03395 PF03050 Transposase IS66 family NDR94_RS03395 PF13007 Transposase C of IS166 homeodomain NDR94_RS03415 PF02384 N-6 DNA Methylase NDR94_RS03430 PF03050 Transposase IS66 family NDR94_RS03430 PF13007 Transposase C of IS166 homeodomain NDR94_RS03430 PF13005 zinc-finger binding domain of transposase IS66 NDR94_RS03430 PF13817 IS66 C-terminal element NDR94_RS03470 PF00665 Integrase core domain NDR94_RS03475 PF01695 IstB-like ATP binding protein NDR94_RS03490 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NDR94_RS03505 PF07669 Eco57I restriction-modification methylase NDR94_RS03505 PF12950 TaqI-like C-terminal specificity domain NDR94_RS03520 PF13411 MerR HTH family regulatory protein NDR94_RS03525 PF00403 Heavy-metal-associated domain NDR94_RS03580 PF00696 Amino acid kinase family NDR94_RS03585 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NDR94_RS03585 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NDR94_RS03595 PF13520 Amino acid permease NDR94_RS03605 PF02321 Outer membrane efflux protein NDR94_RS03615 PF00005 ABC transporter NDR94_RS03620 PF13533 Biotin-lipoyl like NDR94_RS03625 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus NDR94_RS03630 PF02803 Thiolase, C-terminal domain NDR94_RS03630 PF00108 Thiolase, N-terminal domain NDR94_RS03635 PF00106 short chain dehydrogenase NDR94_RS03645 PF03616 Sodium/glutamate symporter NDR94_RS03655 PF00871 Acetokinase family NDR94_RS03660 PF01515 Phosphate acetyl/butaryl transferase NDR94_RS03665 PF11339 Protein of unknown function (DUF3141) NDR94_RS03680 PF05233 PHB accumulation regulatory domain NDR94_RS03680 PF07879 PHB/PHA accumulation regulator DNA-binding domain NDR94_RS03760 PF04546 Sigma-70, non-essential region NDR94_RS03760 PF03979 Sigma-70 factor, region 1.1 NDR94_RS03760 PF00140 Sigma-70 factor, region 1.2 NDR94_RS03760 PF04542 Sigma-70 region 2 NDR94_RS03760 PF04539 Sigma-70 region 3 NDR94_RS03760 PF04545 Sigma-70, region 4 NDR94_RS03765 PF08275 DNA primase catalytic core, N-terminal domain NDR94_RS03765 PF10410 DnaB-helicase binding domain of primase NDR94_RS03765 PF08278 DNA primase DnaG DnaB-binding NDR94_RS03765 PF01807 CHC2 zinc finger NDR94_RS03765 PF13662 Toprim domain NDR94_RS03770 PF01165 Ribosomal protein S21 NDR94_RS03775 PF00814 Glycoprotease family NDR94_RS03780 PF02660 Glycerol-3-phosphate acyltransferase NDR94_RS03790 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NDR94_RS03795 PF01966 HD domain NDR94_RS03795 PF01743 Poly A polymerase head domain NDR94_RS03795 PF12627 Probable RNA and SrmB- binding site of polymerase A NDR94_RS03800 PF04293 SpoVR like protein NDR94_RS03805 PF04285 Protein of unknown function (DUF444) NDR94_RS03810 PF08298 PrkA AAA domain NDR94_RS03810 PF06798 PrkA serine protein kinase C-terminal domain NDR94_RS03815 PF00581 Rhodanese-like domain NDR94_RS03820 PF00149 Calcineurin-like phosphoesterase NDR94_RS03825 PF04379 ApaG domain NDR94_RS03830 PF00398 Ribosomal RNA adenine dimethylase NDR94_RS03835 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NDR94_RS03840 PF00639 PPIC-type PPIASE domain NDR94_RS03840 PF09312 SurA N-terminal domain NDR94_RS03845 PF04453 LPS transport system D NDR94_RS03845 PF03968 OstA-like protein NDR94_RS03850 PF01636 Phosphotransferase enzyme family NDR94_RS03855 PF00483 Nucleotidyl transferase NDR94_RS03860 PF05099 Tellurite resistance protein TerB NDR94_RS03860 PF00226 DnaJ domain NDR94_RS03870 PF07730 Histidine kinase NDR94_RS03870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS03870 PF05384 Sensor protein DegS NDR94_RS03875 PF00072 Response regulator receiver domain NDR94_RS03875 PF00196 Bacterial regulatory proteins, luxR family NDR94_RS03880 PF08402 TOBE domain NDR94_RS03880 PF00005 ABC transporter NDR94_RS03890 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS03895 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS03900 PF00171 Aldehyde dehydrogenase family NDR94_RS03905 PF00202 Aminotransferase class-III NDR94_RS03910 PF00834 Ribulose-phosphate 3 epimerase family NDR94_RS03915 PF13419 Haloacid dehalogenase-like hydrolase NDR94_RS03920 PF04715 Anthranilate synthase component I, N terminal region NDR94_RS03920 PF00425 chorismate binding enzyme NDR94_RS03925 PF00117 Glutamine amidotransferase class-I NDR94_RS03930 PF02885 Glycosyl transferase family, helical bundle domain NDR94_RS03930 PF00591 Glycosyl transferase family, a/b domain NDR94_RS03935 PF00218 Indole-3-glycerol phosphate synthase NDR94_RS03940 PF13545 Crp-like helix-turn-helix domain NDR94_RS03940 PF00027 Cyclic nucleotide-binding domain NDR94_RS03945 PF02566 OsmC-like protein NDR94_RS03950 PF03232 Ubiquinone biosynthesis protein COQ7 NDR94_RS03955 PF01230 HIT domain NDR94_RS03960 PF00004 ATPase family associated with various cellular activities (AAA) NDR94_RS03960 PF17862 AAA+ lid domain NDR94_RS03960 PF06480 FtsH Extracellular NDR94_RS03960 PF01434 Peptidase family M41 NDR94_RS03970 PF03653 Uncharacterised protein family (UPF0093) NDR94_RS03975 PF01118 Semialdehyde dehydrogenase, NAD binding domain NDR94_RS03975 PF02774 Semialdehyde dehydrogenase, dimerisation domain NDR94_RS03980 PF01521 Iron-sulphur cluster biosynthesis NDR94_RS03985 PF03702 Anhydro-N-acetylmuramic acid kinase NDR94_RS03990 PF01551 Peptidase family M23 NDR94_RS03990 PF04225 Opacity-associated protein A LysM-like domain NDR94_RS03995 PF00579 tRNA synthetases class I (W and Y) NDR94_RS03995 PF01479 S4 domain NDR94_RS04025 PF08279 HTH domain NDR94_RS04025 PF03099 Biotin/lipoate A/B protein ligase family NDR94_RS04025 PF02237 Biotin protein ligase C terminal domain NDR94_RS04030 PF03309 Type III pantothenate kinase NDR94_RS04055 PF03143 Elongation factor Tu C-terminal domain NDR94_RS04055 PF00009 Elongation factor Tu GTP binding domain NDR94_RS04055 PF03144 Elongation factor Tu domain 2 NDR94_RS04065 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NDR94_RS04070 PF00467 KOW motif NDR94_RS04070 PF02357 Transcription termination factor nusG NDR94_RS04075 PF00298 Ribosomal protein L11, RNA binding domain NDR94_RS04075 PF03946 Ribosomal protein L11, N-terminal domain NDR94_RS04080 PF00687 Ribosomal protein L1p/L10e family NDR94_RS04085 PF00466 Ribosomal protein L10 NDR94_RS04090 PF00542 Ribosomal protein L7/L12 C-terminal domain NDR94_RS04090 PF16320 Ribosomal protein L7/L12 dimerisation domain NDR94_RS04095 PF04563 RNA polymerase beta subunit NDR94_RS04095 PF04561 RNA polymerase Rpb2, domain 2 NDR94_RS04095 PF04565 RNA polymerase Rpb2, domain 3 NDR94_RS04095 PF10385 RNA polymerase beta subunit external 1 domain NDR94_RS04095 PF00562 RNA polymerase Rpb2, domain 6 NDR94_RS04095 PF04560 RNA polymerase Rpb2, domain 7 NDR94_RS04100 PF05000 RNA polymerase Rpb1, domain 4 NDR94_RS04100 PF04983 RNA polymerase Rpb1, domain 3 NDR94_RS04100 PF00623 RNA polymerase Rpb1, domain 2 NDR94_RS04100 PF04998 RNA polymerase Rpb1, domain 5 NDR94_RS04100 PF04997 RNA polymerase Rpb1, domain 1 NDR94_RS04105 PF00164 Ribosomal protein S12/S23 NDR94_RS04110 PF00177 Ribosomal protein S7p/S5e NDR94_RS04115 PF03144 Elongation factor Tu domain 2 NDR94_RS04115 PF00009 Elongation factor Tu GTP binding domain NDR94_RS04115 PF03764 Elongation factor G, domain IV NDR94_RS04115 PF14492 Elongation Factor G, domain II NDR94_RS04115 PF00679 Elongation factor G C-terminus NDR94_RS04120 PF03143 Elongation factor Tu C-terminal domain NDR94_RS04120 PF03144 Elongation factor Tu domain 2 NDR94_RS04120 PF00009 Elongation factor Tu GTP binding domain NDR94_RS04125 PF00338 Ribosomal protein S10p/S20e NDR94_RS04130 PF00297 Ribosomal protein L3 NDR94_RS04135 PF00573 Ribosomal protein L4/L1 family NDR94_RS04140 PF00276 Ribosomal protein L23 NDR94_RS04145 PF00181 Ribosomal Proteins L2, RNA binding domain NDR94_RS04145 PF03947 Ribosomal Proteins L2, C-terminal domain NDR94_RS04150 PF00203 Ribosomal protein S19 NDR94_RS04155 PF00237 Ribosomal protein L22p/L17e NDR94_RS04160 PF00189 Ribosomal protein S3, C-terminal domain NDR94_RS04160 PF07650 KH domain NDR94_RS04165 PF00252 Ribosomal protein L16p/L10e NDR94_RS04170 PF00831 Ribosomal L29 protein NDR94_RS04175 PF00366 Ribosomal protein S17 NDR94_RS04180 PF00238 Ribosomal protein L14p/L23e NDR94_RS04185 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NDR94_RS04185 PF00467 KOW motif NDR94_RS04190 PF00673 ribosomal L5P family C-terminus NDR94_RS04190 PF00281 Ribosomal protein L5 NDR94_RS04195 PF00253 Ribosomal protein S14p/S29e NDR94_RS04200 PF00410 Ribosomal protein S8 NDR94_RS04205 PF00347 Ribosomal protein L6 NDR94_RS04210 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NDR94_RS04215 PF00333 Ribosomal protein S5, N-terminal domain NDR94_RS04215 PF03719 Ribosomal protein S5, C-terminal domain NDR94_RS04220 PF00327 Ribosomal protein L30p/L7e NDR94_RS04225 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NDR94_RS04230 PF00344 SecY translocase NDR94_RS04235 PF00444 Ribosomal protein L36 NDR94_RS04240 PF00416 Ribosomal protein S13/S18 NDR94_RS04245 PF00411 Ribosomal protein S11 NDR94_RS04250 PF01479 S4 domain NDR94_RS04250 PF00163 Ribosomal protein S4/S9 N-terminal domain NDR94_RS04255 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NDR94_RS04255 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NDR94_RS04255 PF01000 RNA polymerase Rpb3/RpoA insert domain NDR94_RS04260 PF01196 Ribosomal protein L17 NDR94_RS04265 PF06628 Catalase-related immune-responsive NDR94_RS04265 PF00199 Catalase NDR94_RS04270 PF17755 UvrA DNA-binding domain NDR94_RS04270 PF17760 UvrA interaction domain NDR94_RS04275 PF07690 Major Facilitator Superfamily NDR94_RS04280 PF00436 Single-strand binding protein family NDR94_RS04290 PF16363 GDP-mannose 4,6 dehydratase NDR94_RS04295 PF03922 OmpW family NDR94_RS04305 PF01618 MotA/TolQ/ExbB proton channel family NDR94_RS04310 PF01618 MotA/TolQ/ExbB proton channel family NDR94_RS04315 PF02472 Biopolymer transport protein ExbD/TolR NDR94_RS04320 PF03544 Gram-negative bacterial TonB protein C-terminal NDR94_RS04340 PF00005 ABC transporter NDR94_RS04355 PF00085 Thioredoxin NDR94_RS04360 PF04143 Sulphur transport NDR94_RS04365 PF01206 Sulfurtransferase TusA NDR94_RS04385 PF03477 ATP cone domain NDR94_RS04390 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NDR94_RS04390 PF01872 RibD C-terminal domain NDR94_RS04395 PF00677 Lumazine binding domain NDR94_RS04400 PF00925 GTP cyclohydrolase II NDR94_RS04400 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NDR94_RS04405 PF00885 6,7-dimethyl-8-ribityllumazine synthase NDR94_RS04410 PF01029 NusB family NDR94_RS04415 PF02769 AIR synthase related protein, C-terminal domain NDR94_RS04415 PF00586 AIR synthase related protein, N-terminal domain NDR94_RS04420 PF04608 Phosphatidylglycerophosphatase A NDR94_RS04430 PF00925 GTP cyclohydrolase II NDR94_RS04440 PF01497 Periplasmic binding protein NDR94_RS04445 PF07715 TonB-dependent Receptor Plug Domain NDR94_RS04445 PF00593 TonB dependent receptor NDR94_RS04455 PF00149 Calcineurin-like phosphoesterase NDR94_RS04455 PF12320 Type 5 capsule protein repressor C-terminal domain NDR94_RS04470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS04475 PF00072 Response regulator receiver domain NDR94_RS04475 PF00486 Transcriptional regulatory protein, C terminal NDR94_RS04505 PF00849 RNA pseudouridylate synthase NDR94_RS04510 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NDR94_RS04510 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NDR94_RS04515 PF00156 Phosphoribosyl transferase domain NDR94_RS04520 PF02885 Glycosyl transferase family, helical bundle domain NDR94_RS04520 PF00591 Glycosyl transferase family, a/b domain NDR94_RS04520 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NDR94_RS04525 PF00106 short chain dehydrogenase NDR94_RS04535 PF02667 Short chain fatty acid transporter NDR94_RS04545 PF13404 AsnC-type helix-turn-helix domain NDR94_RS04545 PF01037 Lrp/AsnC ligand binding domain NDR94_RS04555 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NDR94_RS04555 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NDR94_RS04565 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NDR94_RS04570 PF04209 homogentisate 1,2-dioxygenase NDR94_RS04580 PF14497 Glutathione S-transferase, C-terminal domain NDR94_RS04580 PF02798 Glutathione S-transferase, N-terminal domain NDR94_RS04585 PF00209 Sodium:neurotransmitter symporter family NDR94_RS04590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS04590 PF02743 Cache domain NDR94_RS04590 PF00672 HAMP domain NDR94_RS04605 PF02254 TrkA-N domain NDR94_RS04605 PF00999 Sodium/hydrogen exchanger family NDR94_RS04610 PF00271 Helicase conserved C-terminal domain NDR94_RS04610 PF00270 DEAD/DEAH box helicase NDR94_RS04615 PF01810 LysE type translocator NDR94_RS04625 PF08240 Alcohol dehydrogenase GroES-like domain NDR94_RS04625 PF00107 Zinc-binding dehydrogenase NDR94_RS04630 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NDR94_RS04630 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDR94_RS04635 PF00850 Histone deacetylase domain NDR94_RS04655 PF04228 Putative neutral zinc metallopeptidase NDR94_RS04680 PF00072 Response regulator receiver domain NDR94_RS04680 PF00196 Bacterial regulatory proteins, luxR family NDR94_RS04685 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NDR94_RS04685 PF07730 Histidine kinase NDR94_RS04685 PF00672 HAMP domain NDR94_RS04685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS04690 PF07690 Major Facilitator Superfamily NDR94_RS04700 PF07690 Major Facilitator Superfamily NDR94_RS04705 PF14710 Respiratory nitrate reductase alpha N-terminal NDR94_RS04705 PF00384 Molybdopterin oxidoreductase NDR94_RS04705 PF01568 Molydopterin dinucleotide binding domain NDR94_RS04710 PF14711 Respiratory nitrate reductase beta C-terminal NDR94_RS04710 PF13247 4Fe-4S dicluster domain NDR94_RS04715 PF02613 Nitrate reductase delta subunit NDR94_RS04720 PF02665 Nitrate reductase gamma subunit NDR94_RS04725 PF09312 SurA N-terminal domain NDR94_RS04730 PF04055 Radical SAM superfamily NDR94_RS04730 PF06463 Molybdenum Cofactor Synthesis C NDR94_RS04735 PF00994 Probable molybdopterin binding domain NDR94_RS04740 PF00994 Probable molybdopterin binding domain NDR94_RS04740 PF03454 MoeA C-terminal region (domain IV) NDR94_RS04740 PF03453 MoeA N-terminal region (domain I and II) NDR94_RS04745 PF01292 Prokaryotic cytochrome b561 NDR94_RS04750 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS04750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS04755 PF00486 Transcriptional regulatory protein, C terminal NDR94_RS04755 PF00072 Response regulator receiver domain NDR94_RS04765 PF00106 short chain dehydrogenase NDR94_RS04775 PF00501 AMP-binding enzyme NDR94_RS04790 PF00072 Response regulator receiver domain NDR94_RS04790 PF00486 Transcriptional regulatory protein, C terminal NDR94_RS04795 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS04795 PF08521 Two-component sensor kinase N-terminal NDR94_RS04795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS04810 PF01219 Prokaryotic diacylglycerol kinase NDR94_RS04815 PF00884 Sulfatase NDR94_RS04820 PF05958 tRNA (Uracil-5-)-methyltransferase NDR94_RS04825 PF00860 Permease family NDR94_RS04830 PF01965 DJ-1/PfpI family NDR94_RS04835 PF02625 XdhC and CoxI family NDR94_RS04835 PF13478 XdhC Rossmann domain NDR94_RS04840 PF00132 Bacterial transferase hexapeptide (six repeats) NDR94_RS04840 PF12804 MobA-like NTP transferase domain NDR94_RS04845 PF00111 2Fe-2S iron-sulfur cluster binding domain NDR94_RS04845 PF01799 [2Fe-2S] binding domain NDR94_RS04850 PF03450 CO dehydrogenase flavoprotein C-terminal domain NDR94_RS04850 PF00941 FAD binding domain in molybdopterin dehydrogenase NDR94_RS04855 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NDR94_RS04855 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NDR94_RS04880 PF13411 MerR HTH family regulatory protein NDR94_RS04885 PF05175 Methyltransferase small domain NDR94_RS04890 PF00970 Oxidoreductase FAD-binding domain NDR94_RS04890 PF00175 Oxidoreductase NAD-binding domain NDR94_RS04895 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NDR94_RS04895 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NDR94_RS04900 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS04905 PF09345 Domain of unknown function (DUF1987) NDR94_RS04920 PF00005 ABC transporter NDR94_RS04920 PF12848 ABC transporter NDR94_RS04925 PF00464 Serine hydroxymethyltransferase NDR94_RS04935 PF07238 PilZ domain NDR94_RS04940 PF18073 Rubredoxin metal binding domain NDR94_RS04950 PF04325 Protein of unknown function (DUF465) NDR94_RS04955 PF01741 Large-conductance mechanosensitive channel, MscL NDR94_RS04960 PF03150 Di-haem cytochrome c peroxidase NDR94_RS04960 PF00034 Cytochrome c NDR94_RS04965 PF13654 AAA domain NDR94_RS04965 PF05362 Lon protease (S16) C-terminal proteolytic domain NDR94_RS04975 PF03350 Uncharacterized protein family, UPF0114 NDR94_RS04985 PF04244 Deoxyribodipyrimidine photo-lyase-related protein NDR94_RS04995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NDR94_RS04995 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NDR94_RS05005 PF00348 Polyprenyl synthetase NDR94_RS05010 PF00829 Ribosomal prokaryotic L21 protein NDR94_RS05015 PF01016 Ribosomal L27 protein NDR94_RS05020 PF01018 GTP1/OBG NDR94_RS05020 PF01926 50S ribosome-binding GTPase NDR94_RS05025 PF01472 PUA domain NDR94_RS05025 PF00696 Amino acid kinase family NDR94_RS05030 PF05981 CreA protein NDR94_RS05035 PF01649 Ribosomal protein S20 NDR94_RS05040 PF03023 Lipid II flippase MurJ NDR94_RS05045 PF06574 FAD synthetase NDR94_RS05045 PF01687 Riboflavin kinase NDR94_RS05050 PF00133 tRNA synthetases class I (I, L, M and V) NDR94_RS05050 PF06827 Zinc finger found in FPG and IleRS NDR94_RS05050 PF08264 Anticodon-binding domain of tRNA NDR94_RS05055 PF01252 Signal peptidase (SPase) II NDR94_RS05060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NDR94_RS05065 PF02401 LytB protein NDR94_RS05070 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor NDR94_RS05070 PF07963 Prokaryotic N-terminal methylation motif NDR94_RS05080 PF05567 Neisseria PilC beta-propeller domain NDR94_RS05110 PF01266 FAD dependent oxidoreductase NDR94_RS05115 PF01253 Translation initiation factor SUI1 NDR94_RS05120 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NDR94_RS05120 PF17944 Arginine decarboxylase C-terminal helical extension NDR94_RS05120 PF17810 Arginine decarboxylase helical bundle domain NDR94_RS05130 PF01554 MatE NDR94_RS05160 PF13847 Methyltransferase domain NDR94_RS05170 PF00356 Bacterial regulatory proteins, lacI family NDR94_RS05170 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NDR94_RS05175 PF05524 PEP-utilising enzyme, N-terminal NDR94_RS05175 PF00391 PEP-utilising enzyme, mobile domain NDR94_RS05175 PF02896 PEP-utilising enzyme, TIM barrel domain NDR94_RS05175 PF00381 PTS HPr component phosphorylation site NDR94_RS05175 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NDR94_RS05180 PF00294 pfkB family carbohydrate kinase NDR94_RS05185 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NDR94_RS05185 PF02378 Phosphotransferase system, EIIC NDR94_RS05190 PF01011 PQQ enzyme repeat NDR94_RS05200 PF00009 Elongation factor Tu GTP binding domain NDR94_RS05200 PF03144 Elongation factor Tu domain 2 NDR94_RS05200 PF16658 Class II release factor RF3, C-terminal domain NDR94_RS05205 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NDR94_RS05205 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NDR94_RS05215 PF13640 2OG-Fe(II) oxygenase superfamily NDR94_RS05215 PF18331 PKHD-type hydroxylase C-terminal domain NDR94_RS05220 PF00593 TonB dependent receptor NDR94_RS05220 PF07715 TonB-dependent Receptor Plug Domain NDR94_RS05225 PF00175 Oxidoreductase NAD-binding domain NDR94_RS05225 PF00258 Flavodoxin NDR94_RS05225 PF00667 FAD binding domain NDR94_RS05245 PF00593 TonB dependent receptor NDR94_RS05245 PF07715 TonB-dependent Receptor Plug Domain NDR94_RS05255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS05255 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS05260 PF02954 Bacterial regulatory protein, Fis family NDR94_RS05260 PF00072 Response regulator receiver domain NDR94_RS05270 PF01551 Peptidase family M23 NDR94_RS05270 PF08525 Opacity-associated protein A N-terminal motif NDR94_RS05270 PF01476 LysM domain NDR94_RS05285 PF01699 Sodium/calcium exchanger protein NDR94_RS05290 PF01699 Sodium/calcium exchanger protein NDR94_RS05295 PF03330 Lytic transglycolase NDR94_RS05295 PF05036 Sporulation related domain NDR94_RS05300 PF02934 GatB/GatE catalytic domain NDR94_RS05300 PF02637 GatB domain NDR94_RS05305 PF01425 Amidase NDR94_RS05310 PF02686 Glu-tRNAGln amidotransferase C subunit NDR94_RS05320 PF04085 rod shape-determining protein MreC NDR94_RS05335 PF02545 Maf-like protein NDR94_RS05340 PF00575 S1 RNA binding domain NDR94_RS05340 PF10150 Ribonuclease E/G family NDR94_RS05350 PF00795 Carbon-nitrogen hydrolase NDR94_RS05355 PF01523 Putative modulator of DNA gyrase NDR94_RS05360 PF04751 Protein of unknown function (DUF615) NDR94_RS05365 PF01523 Putative modulator of DNA gyrase NDR94_RS05370 PF00381 PTS HPr component phosphorylation site NDR94_RS05375 PF03668 P-loop ATPase protein family NDR94_RS05380 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NDR94_RS05385 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NDR94_RS05390 PF04552 Sigma-54, DNA binding domain NDR94_RS05390 PF00309 Sigma-54 factor, Activator interacting domain (AID) NDR94_RS05390 PF04963 Sigma-54 factor, core binding domain NDR94_RS05395 PF12399 Branched-chain amino acid ATP-binding cassette transporter NDR94_RS05395 PF00005 ABC transporter NDR94_RS05415 PF01380 SIS domain NDR94_RS05415 PF00571 CBS domain NDR94_RS05420 PF00005 ABC transporter NDR94_RS05425 PF02405 Permease MlaE NDR94_RS05430 PF02470 MlaD protein NDR94_RS05435 PF05494 MlaC protein NDR94_RS05445 PF06146 Phosphate-starvation-inducible E NDR94_RS05455 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NDR94_RS05460 PF01634 ATP phosphoribosyltransferase NDR94_RS05465 PF00815 Histidinol dehydrogenase NDR94_RS05470 PF00155 Aminotransferase class I and II NDR94_RS05475 PF13180 PDZ domain NDR94_RS05480 PF01784 NIF3 (NGG1p interacting factor 3) NDR94_RS05485 PF01507 Phosphoadenosine phosphosulfate reductase family NDR94_RS05490 PF00009 Elongation factor Tu GTP binding domain NDR94_RS05510 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NDR94_RS05510 PF00437 Type II/IV secretion system protein NDR94_RS05515 PF00482 Type II secretion system (T2SS), protein F NDR94_RS05520 PF01478 Type IV leader peptidase family NDR94_RS05520 PF06750 Bacterial Peptidase A24 N-terminal domain NDR94_RS05525 PF01121 Dephospho-CoA kinase NDR94_RS05530 PF03884 DNA gyrase inhibitor YacG NDR94_RS05540 PF00248 Aldo/keto reductase family NDR94_RS05545 PF00572 Ribosomal protein L13 NDR94_RS05550 PF00380 Ribosomal protein S9/S16 NDR94_RS05555 PF00355 Rieske [2Fe-2S] domain NDR94_RS05555 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NDR94_RS05560 PF00032 Cytochrome b(C-terminal)/b6/petD NDR94_RS05560 PF00033 Cytochrome b/b6/petB NDR94_RS05565 PF02167 Cytochrome C1 family NDR94_RS05570 PF02798 Glutathione S-transferase, N-terminal domain NDR94_RS05570 PF00043 Glutathione S-transferase, C-terminal domain NDR94_RS05575 PF04386 Stringent starvation protein B NDR94_RS05580 PF04972 BON domain NDR94_RS05585 PF13580 SIS domain NDR94_RS05590 PF02021 Uncharacterised protein family UPF0102 NDR94_RS05595 PF04348 LppC putative lipoprotein NDR94_RS05600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NDR94_RS05610 PF02381 MraZ protein, putative antitoxin-like NDR94_RS05615 PF01795 MraW methylase family NDR94_RS05620 PF04999 Cell division protein FtsL NDR94_RS05625 PF00905 Penicillin binding protein transpeptidase domain NDR94_RS05625 PF03717 Penicillin-binding Protein dimerisation domain NDR94_RS05630 PF02875 Mur ligase family, glutamate ligase domain NDR94_RS05630 PF01225 Mur ligase family, catalytic domain NDR94_RS05630 PF08245 Mur ligase middle domain NDR94_RS05635 PF08245 Mur ligase middle domain NDR94_RS05635 PF02875 Mur ligase family, glutamate ligase domain NDR94_RS05635 PF01225 Mur ligase family, catalytic domain NDR94_RS05640 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NDR94_RS05640 PF00953 Glycosyl transferase family 4 NDR94_RS05645 PF02875 Mur ligase family, glutamate ligase domain NDR94_RS05645 PF08245 Mur ligase middle domain NDR94_RS05650 PF01098 Cell cycle protein NDR94_RS05655 PF04101 Glycosyltransferase family 28 C-terminal domain NDR94_RS05655 PF03033 Glycosyltransferase family 28 N-terminal domain NDR94_RS05660 PF01225 Mur ligase family, catalytic domain NDR94_RS05660 PF02875 Mur ligase family, glutamate ligase domain NDR94_RS05660 PF08245 Mur ligase middle domain NDR94_RS05665 PF01820 D-ala D-ala ligase N-terminus NDR94_RS05665 PF07478 D-ala D-ala ligase C-terminus NDR94_RS05670 PF08478 POTRA domain, FtsQ-type NDR94_RS05670 PF03799 Cell division protein FtsQ NDR94_RS05675 PF02491 SHS2 domain inserted in FTSA NDR94_RS05680 PF00091 Tubulin/FtsZ family, GTPase domain NDR94_RS05680 PF12327 FtsZ family, C-terminal domain NDR94_RS05685 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NDR94_RS05690 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NDR94_RS05690 PF13542 Helix-turn-helix domain of transposase family ISL3 NDR94_RS05690 PF01610 Transposase NDR94_RS05710 PF07995 Glucose / Sorbosone dehydrogenase NDR94_RS05715 PF02308 MgtC family NDR94_RS05735 PF03641 Possible lysine decarboxylase NDR94_RS05740 PF00106 short chain dehydrogenase NDR94_RS05745 PF01740 STAS domain NDR94_RS05745 PF00916 Sulfate permease family NDR94_RS05755 PF06039 Malate:quinone oxidoreductase (Mqo) NDR94_RS05770 PF07044 Protein of unknown function (DUF1329) NDR94_RS05805 PF01435 Peptidase family M48 NDR94_RS05815 PF01169 Uncharacterized protein family UPF0016 NDR94_RS05820 PF08468 Methyltransferase small domain N-terminal NDR94_RS05820 PF05175 Methyltransferase small domain NDR94_RS05825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NDR94_RS05825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NDR94_RS05830 PF01810 LysE type translocator NDR94_RS05835 PF00501 AMP-binding enzyme NDR94_RS05835 PF13193 AMP-binding enzyme C-terminal domain NDR94_RS05840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS05840 PF13426 PAS domain NDR94_RS05840 PF00072 Response regulator receiver domain NDR94_RS05845 PF00753 Metallo-beta-lactamase superfamily NDR94_RS05850 PF13488 Glycine zipper NDR94_RS05850 PF00691 OmpA family NDR94_RS05855 PF00072 Response regulator receiver domain NDR94_RS05855 PF09308 LuxQ, periplasmic NDR94_RS05855 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS05855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS05860 PF00563 EAL domain NDR94_RS05860 PF03707 Bacterial signalling protein N terminal repeat NDR94_RS05860 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS05865 PF01553 Acyltransferase NDR94_RS05870 PF01515 Phosphate acetyl/butaryl transferase NDR94_RS05870 PF07085 DRTGG domain NDR94_RS05875 PF00871 Acetokinase family NDR94_RS05880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NDR94_RS05885 PF00255 Glutathione peroxidase NDR94_RS05890 PF00440 Bacterial regulatory proteins, tetR family NDR94_RS05890 PF16925 Tetracyclin repressor-like, C-terminal domain NDR94_RS05895 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NDR94_RS05895 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDR94_RS05915 PF02152 Dihydroneopterin aldolase NDR94_RS05930 PF00258 Flavodoxin NDR94_RS05935 PF00596 Class II Aldolase and Adducin N-terminal domain NDR94_RS05960 PF13091 PLD-like domain NDR94_RS05960 PF13396 Phospholipase_D-nuclease N-terminal NDR94_RS05965 PF01965 DJ-1/PfpI family NDR94_RS05970 PF09905 DNA-binding protein VF530 NDR94_RS05975 PF05681 Fumarate hydratase (Fumerase) NDR94_RS05975 PF05683 Fumarase C-terminus NDR94_RS05980 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS05985 PF00970 Oxidoreductase FAD-binding domain NDR94_RS05985 PF00175 Oxidoreductase NAD-binding domain NDR94_RS05990 PF00224 Pyruvate kinase, barrel domain NDR94_RS05990 PF02887 Pyruvate kinase, alpha/beta domain NDR94_RS06015 PF07726 ATPase family associated with various cellular activities (AAA) NDR94_RS06015 PF17863 AAA lid domain NDR94_RS06040 PF08411 Exonuclease C-terminal NDR94_RS06040 PF00929 Exonuclease NDR94_RS06055 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NDR94_RS06065 PF01842 ACT domain NDR94_RS06065 PF00551 Formyl transferase NDR94_RS06075 PF05872 Bacterial protein of unknown function (DUF853) NDR94_RS06085 PF00483 Nucleotidyl transferase NDR94_RS06085 PF01050 Mannose-6-phosphate isomerase NDR94_RS06090 PF03883 Peroxide stress protein YaaA NDR94_RS06095 PF16916 Dimerisation domain of Zinc Transporter NDR94_RS06095 PF01545 Cation efflux family NDR94_RS06100 PF13638 PIN domain NDR94_RS06100 PF02562 PhoH-like protein NDR94_RS06105 PF01967 MoaC family NDR94_RS06110 PF02597 ThiS family NDR94_RS06115 PF02391 MoaE protein NDR94_RS06125 PF00271 Helicase conserved C-terminal domain NDR94_RS06125 PF00270 DEAD/DEAH box helicase NDR94_RS06130 PF02230 Phospholipase/Carboxylesterase NDR94_RS06135 PF00497 Bacterial extracellular solute-binding proteins, family 3 NDR94_RS06140 PF02769 AIR synthase related protein, C-terminal domain NDR94_RS06140 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NDR94_RS06140 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NDR94_RS06145 PF01784 NIF3 (NGG1p interacting factor 3) NDR94_RS06155 PF00293 NUDIX domain NDR94_RS06155 PF09297 NADH pyrophosphatase zinc ribbon domain NDR94_RS06160 PF00293 NUDIX domain NDR94_RS06165 PF00132 Bacterial transferase hexapeptide (six repeats) NDR94_RS06175 PF01370 NAD dependent epimerase/dehydratase family NDR94_RS06175 PF02222 ATP-grasp domain NDR94_RS06180 PF01595 Cyclin M transmembrane N-terminal domain NDR94_RS06180 PF00571 CBS domain NDR94_RS06180 PF03471 Transporter associated domain NDR94_RS06185 PF01578 Cytochrome C assembly protein NDR94_RS06190 PF00448 SRP54-type protein, GTPase domain NDR94_RS06190 PF02881 SRP54-type protein, helical bundle domain NDR94_RS06190 PF02978 Signal peptide binding domain NDR94_RS06195 PF00886 Ribosomal protein S16 NDR94_RS06200 PF05239 PRC-barrel domain NDR94_RS06200 PF01782 RimM N-terminal domain NDR94_RS06205 PF01746 tRNA (Guanine-1)-methyltransferase NDR94_RS06210 PF01245 Ribosomal protein L19 NDR94_RS06215 PF02899 Phage integrase, N-terminal SAM-like domain NDR94_RS06215 PF00589 Phage integrase family NDR94_RS06220 PF10411 Disulfide bond isomerase protein N-terminus NDR94_RS06220 PF13098 Thioredoxin-like domain NDR94_RS06225 PF04828 Glutathione-dependent formaldehyde-activating enzyme NDR94_RS06230 PF03447 Homoserine dehydrogenase, NAD binding domain NDR94_RS06230 PF01842 ACT domain NDR94_RS06230 PF00742 Homoserine dehydrogenase NDR94_RS06235 PF00291 Pyridoxal-phosphate dependent enzyme NDR94_RS06235 PF14821 Threonine synthase N terminus NDR94_RS06240 PF00929 Exonuclease NDR94_RS06245 PF01979 Amidohydrolase family NDR94_RS06255 PF00764 Arginosuccinate synthase NDR94_RS06260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NDR94_RS06270 PF10576 Iron-sulfur binding domain of endonuclease III NDR94_RS06270 PF00633 Helix-hairpin-helix motif NDR94_RS06270 PF00730 HhH-GPD superfamily base excision DNA repair protein NDR94_RS06275 PF02508 Rnf-Nqr subunit, membrane protein NDR94_RS06280 PF04205 FMN-binding domain NDR94_RS06285 PF03116 NQR2, RnfD, RnfE family NDR94_RS06290 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NDR94_RS06290 PF12838 4Fe-4S dicluster domain NDR94_RS06290 PF13375 RnfC Barrel sandwich hybrid domain NDR94_RS06290 PF10531 SLBB domain NDR94_RS06295 PF04060 Putative Fe-S cluster NDR94_RS06300 PF02508 Rnf-Nqr subunit, membrane protein NDR94_RS06315 PF00378 Enoyl-CoA hydratase/isomerase NDR94_RS06320 PF13458 Periplasmic binding protein NDR94_RS06325 PF03167 Uracil DNA glycosylase superfamily NDR94_RS06340 PF01571 Aminomethyltransferase folate-binding domain NDR94_RS06345 PF03937 Flavinator of succinate dehydrogenase NDR94_RS06355 PF00890 FAD binding domain NDR94_RS06355 PF02910 Fumarate reductase flavoprotein C-term NDR94_RS06360 PF08281 Sigma-70, region 4 NDR94_RS06360 PF04542 Sigma-70 region 2 NDR94_RS06365 PF03872 Anti sigma-E protein RseA, N-terminal domain NDR94_RS06365 PF03873 Anti sigma-E protein RseA, C-terminal domain NDR94_RS06370 PF03888 MucB/RseB N-terminal domain NDR94_RS06370 PF17188 MucB/RseB C-terminal domain NDR94_RS06380 PF13180 PDZ domain NDR94_RS06385 PF00679 Elongation factor G C-terminus NDR94_RS06385 PF00009 Elongation factor Tu GTP binding domain NDR94_RS06385 PF03144 Elongation factor Tu domain 2 NDR94_RS06385 PF06421 GTP-binding protein LepA C-terminus NDR94_RS06390 PF10502 Signal peptidase, peptidase S26 NDR94_RS06400 PF00035 Double-stranded RNA binding motif NDR94_RS06400 PF14622 Ribonuclease-III-like NDR94_RS06405 PF01926 50S ribosome-binding GTPase NDR94_RS06405 PF07650 KH domain NDR94_RS06410 PF02565 Recombination protein O C terminal NDR94_RS06410 PF11967 Recombination protein O N terminal NDR94_RS06415 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NDR94_RS06425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS06425 PF03466 LysR substrate binding domain NDR94_RS06435 PF08003 Protein of unknown function (DUF1698) NDR94_RS06440 PF13649 Methyltransferase domain NDR94_RS06450 PF00004 ATPase family associated with various cellular activities (AAA) NDR94_RS06450 PF05362 Lon protease (S16) C-terminal proteolytic domain NDR94_RS06450 PF02190 ATP-dependent protease La (LON) substrate-binding domain NDR94_RS06455 PF12833 Helix-turn-helix domain NDR94_RS06460 PF00171 Aldehyde dehydrogenase family NDR94_RS06460 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NDR94_RS06460 PF01619 Proline dehydrogenase NDR94_RS06460 PF14850 DNA-binding domain of Proline dehydrogenase NDR94_RS06465 PF00474 Sodium:solute symporter family NDR94_RS06475 PF07715 TonB-dependent Receptor Plug Domain NDR94_RS06475 PF00593 TonB dependent receptor NDR94_RS06480 PF00474 Sodium:solute symporter family NDR94_RS06490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS06490 PF03466 LysR substrate binding domain NDR94_RS06495 PF00775 Dioxygenase NDR94_RS06495 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NDR94_RS06500 PF00775 Dioxygenase NDR94_RS06505 PF03969 AFG1-like ATPase NDR94_RS06510 PF03547 Membrane transport protein NDR94_RS06515 PF09339 IclR helix-turn-helix domain NDR94_RS06515 PF01614 Bacterial transcriptional regulator NDR94_RS06520 PF01144 Coenzyme A transferase NDR94_RS06525 PF01144 Coenzyme A transferase NDR94_RS06530 PF00108 Thiolase, N-terminal domain NDR94_RS06530 PF02803 Thiolase, C-terminal domain NDR94_RS06535 PF10397 Adenylosuccinate lyase C-terminus NDR94_RS06535 PF00206 Lyase NDR94_RS06540 PF12146 Serine aminopeptidase, S33 NDR94_RS06545 PF02627 Carboxymuconolactone decarboxylase family NDR94_RS06555 PF00849 RNA pseudouridylate synthase NDR94_RS06555 PF01479 S4 domain NDR94_RS06565 PF09334 tRNA synthetases class I (M) NDR94_RS06565 PF01588 Putative tRNA binding domain NDR94_RS06570 PF10609 NUBPL iron-transfer P-loop NTPase NDR94_RS06575 PF00313 'Cold-shock' DNA-binding domain NDR94_RS06580 PF00692 dUTPase NDR94_RS06585 PF03264 NapC/NirT cytochrome c family, N-terminal region NDR94_RS06590 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) NDR94_RS06595 PF00384 Molybdopterin oxidoreductase NDR94_RS06595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NDR94_RS06595 PF01568 Molydopterin dinucleotide binding domain NDR94_RS06605 PF06796 Periplasmic nitrate reductase protein NapE NDR94_RS06610 PF07690 Major Facilitator Superfamily NDR94_RS06615 PF10263 SprT-like family NDR94_RS06615 PF17283 SprT-like zinc ribbon domain NDR94_RS06625 PF04893 Yip1 domain NDR94_RS06635 PF01171 PP-loop family NDR94_RS06645 PF00793 DAHP synthetase I family NDR94_RS06650 PF03352 Methyladenine glycosylase NDR94_RS06670 PF01654 Cytochrome bd terminal oxidase subunit I NDR94_RS06675 PF02322 Cytochrome bd terminal oxidase subunit II NDR94_RS06680 PF08173 Membrane bound YbgT-like protein NDR94_RS06690 PF02146 Sir2 family NDR94_RS06695 PF00877 NlpC/P60 family NDR94_RS06700 PF00877 NlpC/P60 family NDR94_RS06715 PF07715 TonB-dependent Receptor Plug Domain NDR94_RS06715 PF00593 TonB dependent receptor NDR94_RS06725 PF12557 Cob(I)alamin adenosyltransferase N terminal NDR94_RS06725 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP NDR94_RS06730 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NDR94_RS06730 PF07685 CobB/CobQ-like glutamine amidotransferase domain NDR94_RS06735 PF00881 Nitroreductase family NDR94_RS06745 PF17113 Regulatory signalling modulator protein AmpE NDR94_RS06745 PF03186 CobD/Cbib protein NDR94_RS06750 PF00155 Aminotransferase class I and II NDR94_RS06755 PF07685 CobB/CobQ-like glutamine amidotransferase domain NDR94_RS06755 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NDR94_RS06760 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NDR94_RS06765 PF02277 Phosphoribosyltransferase NDR94_RS06775 PF02654 Cobalamin-5-phosphate synthase NDR94_RS06780 PF00462 Glutaredoxin NDR94_RS06785 PF00581 Rhodanese-like domain NDR94_RS06790 PF04891 NifQ NDR94_RS06800 PF12838 4Fe-4S dicluster domain NDR94_RS06805 PF02579 Dinitrogenase iron-molybdenum cofactor NDR94_RS06805 PF04055 Radical SAM superfamily NDR94_RS06820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS06820 PF03466 LysR substrate binding domain NDR94_RS06825 PF01042 Endoribonuclease L-PSP NDR94_RS06830 PF12833 Helix-turn-helix domain NDR94_RS06830 PF02311 AraC-like ligand binding domain NDR94_RS06835 PF07690 Major Facilitator Superfamily NDR94_RS06840 PF05724 Thiopurine S-methyltransferase (TPMT) NDR94_RS06845 PF00158 Sigma-54 interaction domain NDR94_RS06845 PF13185 GAF domain NDR94_RS06845 PF02954 Bacterial regulatory protein, Fis family NDR94_RS06850 PF00989 PAS fold NDR94_RS06850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS06855 PF02508 Rnf-Nqr subunit, membrane protein NDR94_RS06860 PF04060 Putative Fe-S cluster NDR94_RS06870 PF03116 NQR2, RnfD, RnfE family NDR94_RS06875 PF04205 FMN-binding domain NDR94_RS06880 PF02508 Rnf-Nqr subunit, membrane protein NDR94_RS06885 PF03658 RnfH family Ubiquitin NDR94_RS06890 PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal NDR94_RS06890 PF02579 Dinitrogenase iron-molybdenum cofactor NDR94_RS06910 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family NDR94_RS06915 PF00148 Nitrogenase component 1 type Oxidoreductase NDR94_RS06920 PF11844 Domain of unknown function (DUF3364) NDR94_RS06920 PF00148 Nitrogenase component 1 type Oxidoreductase NDR94_RS06925 PF06988 NifT/FixU protein NDR94_RS06930 PF02579 Dinitrogenase iron-molybdenum cofactor NDR94_RS06930 PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal NDR94_RS06945 PF00148 Nitrogenase component 1 type Oxidoreductase NDR94_RS06950 PF00148 Nitrogenase component 1 type Oxidoreductase NDR94_RS06955 PF02579 Dinitrogenase iron-molybdenum cofactor NDR94_RS06960 PF03270 Protein of unknown function, DUF269 NDR94_RS06970 PF13237 4Fe-4S dicluster domain NDR94_RS07005 PF00005 ABC transporter NDR94_RS07005 PF03459 TOBE domain NDR94_RS07010 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS07020 PF03459 TOBE domain NDR94_RS07020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS07025 PF01521 Iron-sulphur cluster biosynthesis NDR94_RS07030 PF04324 BFD-like [2Fe-2S] binding domain NDR94_RS07030 PF01592 NifU-like N terminal domain NDR94_RS07030 PF01106 NifU-like domain NDR94_RS07035 PF00266 Aminotransferase class-V NDR94_RS07040 PF00682 HMGL-like NDR94_RS07045 PF00132 Bacterial transferase hexapeptide (six repeats) NDR94_RS07055 PF03206 Nitrogen fixation protein NifW NDR94_RS07060 PF04319 NifZ domain NDR94_RS07065 PF00639 PPIC-type PPIASE domain NDR94_RS07070 PF06689 ClpX C4-type zinc finger NDR94_RS07070 PF07724 AAA domain (Cdc48 subfamily) NDR94_RS07070 PF10431 C-terminal, D2-small domain, of ClpB protein NDR94_RS07075 PF00258 Flavodoxin NDR94_RS07080 PF00255 Glutathione peroxidase NDR94_RS07085 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NDR94_RS07090 PF00581 Rhodanese-like domain NDR94_RS07095 PF01612 3'-5' exonuclease NDR94_RS07095 PF00570 HRDC domain NDR94_RS07100 PF05166 YcgL domain NDR94_RS07110 PF03692 Putative zinc- or iron-chelating domain NDR94_RS07120 PF01212 Beta-eliminating lyase NDR94_RS07125 PF01411 tRNA synthetases class II (A) NDR94_RS07125 PF02272 DHHA1 domain NDR94_RS07125 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NDR94_RS07130 PF00696 Amino acid kinase family NDR94_RS07130 PF01842 ACT domain NDR94_RS07130 PF13840 ACT domain NDR94_RS07135 PF02599 Global regulator protein family NDR94_RS07160 PF00571 CBS domain NDR94_RS07160 PF01769 Divalent cation transporter NDR94_RS07160 PF03448 MgtE intracellular N domain NDR94_RS07165 PF04277 Oxaloacetate decarboxylase, gamma chain NDR94_RS07170 PF02436 Conserved carboxylase domain NDR94_RS07170 PF00364 Biotin-requiring enzyme NDR94_RS07170 PF00682 HMGL-like NDR94_RS07175 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit NDR94_RS07180 PF03869 Arc-like DNA binding domain NDR94_RS07200 PF07317 Flagellar regulator YcgR NDR94_RS07200 PF07238 PilZ domain NDR94_RS07220 PF01584 CheW-like domain NDR94_RS07220 PF00072 Response regulator receiver domain NDR94_RS07225 PF01739 CheR methyltransferase, SAM binding domain NDR94_RS07225 PF03705 CheR methyltransferase, all-alpha domain NDR94_RS07230 PF00460 Flagella basal body rod protein NDR94_RS07235 PF00460 Flagella basal body rod protein NDR94_RS07235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NDR94_RS07245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NDR94_RS07245 PF07559 Flagellar basal body protein FlaE NDR94_RS07245 PF00460 Flagella basal body rod protein NDR94_RS07250 PF00460 Flagella basal body rod protein NDR94_RS07250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NDR94_RS07255 PF00460 Flagella basal body rod protein NDR94_RS07255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NDR94_RS07260 PF02107 Flagellar L-ring protein NDR94_RS07265 PF02119 Flagellar P-ring protein NDR94_RS07270 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NDR94_RS07270 PF10135 Rod binding protein NDR94_RS07275 PF00460 Flagella basal body rod protein NDR94_RS07275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NDR94_RS07280 PF00669 Bacterial flagellin N-terminal helical region NDR94_RS07285 PF00009 Elongation factor Tu GTP binding domain NDR94_RS07295 PF14307 Glycosyltransferase WbsX NDR94_RS07295 PF05045 Rhamnan synthesis protein F NDR94_RS07300 PF07196 Flagellin hook IN motif NDR94_RS07300 PF00669 Bacterial flagellin N-terminal helical region NDR94_RS07300 PF00700 Bacterial flagellin C-terminal helical region NDR94_RS07310 PF07196 Flagellin hook IN motif NDR94_RS07310 PF02465 Flagellar hook-associated protein 2 N-terminus NDR94_RS07310 PF07195 Flagellar hook-associated protein 2 C-terminus NDR94_RS07340 PF00563 EAL domain NDR94_RS07340 PF05231 MASE1 NDR94_RS07345 PF11818 C-terminal domain of tail specific protease (DUF3340) NDR94_RS07345 PF00595 PDZ domain NDR94_RS07345 PF03572 Peptidase family S41 NDR94_RS07345 PF17804 Tail specific protease N-terminal domain NDR94_RS07350 PF14765 Polyketide synthase dehydratase NDR94_RS07350 PF08659 KR domain NDR94_RS07350 PF00109 Beta-ketoacyl synthase, N-terminal domain NDR94_RS07350 PF00550 Phosphopantetheine attachment site NDR94_RS07350 PF09277 Erythronolide synthase, docking NDR94_RS07350 PF16197 Ketoacyl-synthetase C-terminal extension NDR94_RS07350 PF00698 Acyl transferase domain NDR94_RS07350 PF02801 Beta-ketoacyl synthase, C-terminal domain NDR94_RS07350 PF08990 Erythronolide synthase docking NDR94_RS07350 PF08240 Alcohol dehydrogenase GroES-like domain NDR94_RS07380 PF11855 Protein of unknown function (DUF3375) NDR94_RS07385 PF02127 Aminopeptidase I zinc metalloprotease (M18) NDR94_RS07390 PF00849 RNA pseudouridylate synthase NDR94_RS07395 PF03776 Septum formation topological specificity factor MinE NDR94_RS07400 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NDR94_RS07405 PF03775 Septum formation inhibitor MinC, C-terminal domain NDR94_RS07405 PF05209 Septum formation inhibitor MinC, N-terminal domain NDR94_RS07410 PF03279 Bacterial lipid A biosynthesis acyltransferase NDR94_RS07415 PF02678 Pirin NDR94_RS07415 PF05726 Pirin C-terminal cupin domain NDR94_RS07420 PF04333 MlaA lipoprotein NDR94_RS07435 PF04341 Protein of unknown function, DUF485 NDR94_RS07440 PF00474 Sodium:solute symporter family NDR94_RS07445 PF00561 alpha/beta hydrolase fold NDR94_RS07445 PF00106 short chain dehydrogenase NDR94_RS07460 PF06794 Uncharacterised protein family (UPF0270) NDR94_RS07465 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NDR94_RS07465 PF01627 Hpt domain NDR94_RS07465 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS07465 PF00072 Response regulator receiver domain NDR94_RS07465 PF00672 HAMP domain NDR94_RS07465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS07470 PF05343 M42 glutamyl aminopeptidase NDR94_RS07475 PF02875 Mur ligase family, glutamate ligase domain NDR94_RS07475 PF08245 Mur ligase middle domain NDR94_RS07475 PF08443 RimK-like ATP-grasp domain NDR94_RS07480 PF13537 Glutamine amidotransferase domain NDR94_RS07480 PF00733 Asparagine synthase NDR94_RS07490 PF00082 Subtilase family NDR94_RS07490 PF01483 Proprotein convertase P-domain NDR94_RS07500 PF12867 DinB superfamily NDR94_RS07500 PF03781 Sulfatase-modifying factor enzyme 1 NDR94_RS07510 PF00106 short chain dehydrogenase NDR94_RS07520 PF00270 DEAD/DEAH box helicase NDR94_RS07520 PF08494 DEAD/H associated NDR94_RS07520 PF00271 Helicase conserved C-terminal domain NDR94_RS07555 PF07995 Glucose / Sorbosone dehydrogenase NDR94_RS07560 PF01011 PQQ enzyme repeat NDR94_RS07565 PF17783 CvfB-like winged helix domain NDR94_RS07565 PF13509 S1 domain NDR94_RS07580 PF00150 Cellulase (glycosyl hydrolase family 5) NDR94_RS07610 PF04851 Type III restriction enzyme, res subunit NDR94_RS07610 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) NDR94_RS07610 PF00271 Helicase conserved C-terminal domain NDR94_RS07610 PF08463 EcoEI R protein C-terminal NDR94_RS07620 PF02384 N-6 DNA Methylase NDR94_RS07620 PF12161 HsdM N-terminal domain NDR94_RS07630 PF01420 Type I restriction modification DNA specificity domain NDR94_RS07660 PF12419 SNF2 Helicase protein NDR94_RS07660 PF00176 SNF2 family N-terminal domain NDR94_RS07660 PF00271 Helicase conserved C-terminal domain NDR94_RS07680 PF13148 Protein of unknown function (DUF3987) NDR94_RS07705 PF13356 Arm DNA-binding domain NDR94_RS07705 PF00589 Phage integrase family NDR94_RS07705 PF14659 Phage integrase, N-terminal SAM-like domain NDR94_RS07710 PF07690 Major Facilitator Superfamily NDR94_RS07730 PF01494 FAD binding domain NDR94_RS07740 PF00072 Response regulator receiver domain NDR94_RS07740 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS07760 PF03631 Virulence factor BrkB NDR94_RS07765 PF13579 Glycosyl transferase 4-like domain NDR94_RS07765 PF00534 Glycosyl transferases group 1 NDR94_RS07785 PF11953 Domain of unknown function (DUF3470) NDR94_RS07785 PF00037 4Fe-4S binding domain NDR94_RS07790 PF05190 MutS family domain IV NDR94_RS07790 PF01624 MutS domain I NDR94_RS07790 PF05188 MutS domain II NDR94_RS07790 PF05192 MutS domain III NDR94_RS07790 PF00488 MutS domain V NDR94_RS07800 PF02464 Competence-damaged protein NDR94_RS07805 PF00154 recA bacterial DNA recombination protein NDR94_RS07810 PF02631 RecX family NDR94_RS07820 PF00753 Metallo-beta-lactamase superfamily NDR94_RS07820 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NDR94_RS07820 PF10996 Beta-Casp domain NDR94_RS07825 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase NDR94_RS07825 PF09363 XFP C-terminal domain NDR94_RS07825 PF09364 XFP N-terminal domain NDR94_RS07835 PF03942 DTW domain NDR94_RS07840 PF00892 EamA-like transporter family NDR94_RS07845 PF00072 Response regulator receiver domain NDR94_RS07845 PF00196 Bacterial regulatory proteins, luxR family NDR94_RS07850 PF03466 LysR substrate binding domain NDR94_RS07850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS07855 PF00175 Oxidoreductase NAD-binding domain NDR94_RS07855 PF00970 Oxidoreductase FAD-binding domain NDR94_RS07860 PF02810 SEC-C motif NDR94_RS07870 PF00691 OmpA family NDR94_RS07870 PF05736 OprF membrane domain NDR94_RS07880 PF06733 DEAD_2 NDR94_RS07880 PF13307 Helicase C-terminal domain NDR94_RS07885 PF00144 Beta-lactamase NDR94_RS07890 PF04972 BON domain NDR94_RS07890 PF00691 OmpA family NDR94_RS07895 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NDR94_RS07895 PF01243 Pyridoxamine 5'-phosphate oxidase NDR94_RS07910 PF13244 Domain of unknown function (DUF4040) NDR94_RS07910 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NDR94_RS07910 PF00361 Proton-conducting membrane transporter NDR94_RS07910 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NDR94_RS07915 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NDR94_RS07920 PF00361 Proton-conducting membrane transporter NDR94_RS07925 PF01899 Na+/H+ ion antiporter subunit NDR94_RS07930 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NDR94_RS07935 PF03334 Na+/H+ antiporter subunit NDR94_RS07940 PF01842 ACT domain NDR94_RS07940 PF08335 GlnD PII-uridylyltransferase NDR94_RS07940 PF01966 HD domain NDR94_RS07940 PF01909 Nucleotidyltransferase domain NDR94_RS07945 PF00557 Metallopeptidase family M24 NDR94_RS07950 PF00318 Ribosomal protein S2 NDR94_RS07955 PF00889 Elongation factor TS NDR94_RS07960 PF00696 Amino acid kinase family NDR94_RS07965 PF01765 Ribosome recycling factor NDR94_RS07970 PF01255 Putative undecaprenyl diphosphate synthase NDR94_RS07980 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NDR94_RS07980 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NDR94_RS07980 PF13288 DXP reductoisomerase C-terminal domain NDR94_RS07985 PF13180 PDZ domain NDR94_RS07985 PF17820 PDZ domain NDR94_RS07985 PF02163 Peptidase family M50 NDR94_RS07990 PF01103 Surface antigen NDR94_RS07990 PF07244 Surface antigen variable number repeat NDR94_RS07995 PF03938 Outer membrane protein (OmpH-like) NDR94_RS08000 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NDR94_RS08000 PF00132 Bacterial transferase hexapeptide (six repeats) NDR94_RS08005 PF07977 FabA-like domain NDR94_RS08010 PF00132 Bacterial transferase hexapeptide (six repeats) NDR94_RS08010 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NDR94_RS08015 PF02684 Lipid-A-disaccharide synthetase NDR94_RS08020 PF01351 Ribonuclease HII NDR94_RS08025 PF07733 Bacterial DNA polymerase III alpha NTPase domain NDR94_RS08025 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NDR94_RS08025 PF14579 Helix-hairpin-helix motif NDR94_RS08025 PF02811 PHP domain NDR94_RS08025 PF01336 OB-fold nucleic acid binding domain NDR94_RS08030 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NDR94_RS08035 PF09179 TilS substrate binding domain NDR94_RS08035 PF01171 PP-loop family NDR94_RS08035 PF11734 TilS substrate C-terminal domain NDR94_RS08040 PF06418 CTP synthase N-terminus NDR94_RS08040 PF00117 Glutamine amidotransferase class-I NDR94_RS08045 PF00793 DAHP synthetase I family NDR94_RS08050 PF00113 Enolase, C-terminal TIM barrel domain NDR94_RS08050 PF03952 Enolase, N-terminal domain NDR94_RS08055 PF04977 Septum formation initiator NDR94_RS08060 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NDR94_RS08075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS08075 PF03466 LysR substrate binding domain NDR94_RS08080 PF08240 Alcohol dehydrogenase GroES-like domain NDR94_RS08080 PF00107 Zinc-binding dehydrogenase NDR94_RS08085 PF00756 Putative esterase NDR94_RS08090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NDR94_RS08100 PF02542 YgbB family NDR94_RS08105 PF01142 tRNA pseudouridine synthase D (TruD) NDR94_RS08110 PF01975 Survival protein SurE NDR94_RS08125 PF01476 LysM domain NDR94_RS08125 PF01551 Peptidase family M23 NDR94_RS08130 PF00140 Sigma-70 factor, region 1.2 NDR94_RS08130 PF04542 Sigma-70 region 2 NDR94_RS08130 PF04539 Sigma-70 region 3 NDR94_RS08130 PF04545 Sigma-70, region 4 NDR94_RS08145 PF00474 Sodium:solute symporter family NDR94_RS08160 PF01725 Ham1 family NDR94_RS08170 PF00582 Universal stress protein family NDR94_RS08175 PF01844 HNH endonuclease NDR94_RS08180 PF01709 Transcriptional regulator NDR94_RS08185 PF13936 Helix-turn-helix domain NDR94_RS08185 PF00665 Integrase core domain NDR94_RS08190 PF00892 EamA-like transporter family NDR94_RS08200 PF03475 3-alpha domain NDR94_RS08200 PF03473 MOSC domain NDR94_RS08210 PF01966 HD domain NDR94_RS08210 PF13286 Phosphohydrolase-associated domain NDR94_RS08215 PF00909 Ammonium Transporter Family NDR94_RS08220 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NDR94_RS08235 PF00459 Inositol monophosphatase family NDR94_RS08260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS08260 PF00672 HAMP domain NDR94_RS08265 PF05698 Bacterial trigger factor protein (TF) C-terminus NDR94_RS08270 PF12849 PBP superfamily domain NDR94_RS08280 PF02690 Na+/Pi-cotransporter NDR94_RS08285 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NDR94_RS08285 PF01266 FAD dependent oxidoreductase NDR94_RS08290 PF08220 DeoR-like helix-turn-helix domain NDR94_RS08290 PF00455 DeoR C terminal sensor domain NDR94_RS08295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NDR94_RS08295 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NDR94_RS08300 PF00230 Major intrinsic protein NDR94_RS08310 PF03880 DbpA RNA binding domain NDR94_RS08310 PF00270 DEAD/DEAH box helicase NDR94_RS08310 PF00271 Helicase conserved C-terminal domain NDR94_RS08315 PF07885 Ion channel NDR94_RS08330 PF01593 Flavin containing amine oxidoreductase NDR94_RS08335 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NDR94_RS08335 PF00034 Cytochrome c NDR94_RS08350 PF07690 Major Facilitator Superfamily NDR94_RS08355 PF12392 Collagenase NDR94_RS08355 PF01136 Peptidase family U32 NDR94_RS08360 PF13411 MerR HTH family regulatory protein NDR94_RS08385 PF09278 MerR, DNA binding NDR94_RS08385 PF00376 MerR family regulatory protein NDR94_RS08415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS08415 PF03466 LysR substrate binding domain NDR94_RS08420 PF02525 Flavodoxin-like fold NDR94_RS08440 PF00141 Peroxidase NDR94_RS08445 PF13649 Methyltransferase domain NDR94_RS08460 PF03466 LysR substrate binding domain NDR94_RS08460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS08480 PF00268 Ribonucleotide reductase, small chain NDR94_RS08485 PF02867 Ribonucleotide reductase, barrel domain NDR94_RS08485 PF00317 Ribonucleotide reductase, all-alpha domain NDR94_RS08485 PF03477 ATP cone domain NDR94_RS08490 PF00072 Response regulator receiver domain NDR94_RS08490 PF00486 Transcriptional regulatory protein, C terminal NDR94_RS08495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS08495 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS08495 PF00672 HAMP domain NDR94_RS08500 PF09317 Domain of unknown function (DUF1974) NDR94_RS08500 PF02770 Acyl-CoA dehydrogenase, middle domain NDR94_RS08500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NDR94_RS08500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NDR94_RS08505 PF00924 Mechanosensitive ion channel NDR94_RS08510 PF00581 Rhodanese-like domain NDR94_RS08530 PF11871 Domain of unknown function (DUF3391) NDR94_RS08530 PF01966 HD domain NDR94_RS08540 PF00202 Aminotransferase class-III NDR94_RS08550 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NDR94_RS08555 PF00005 ABC transporter NDR94_RS08560 PF01061 ABC-2 type transporter NDR94_RS08565 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NDR94_RS08565 PF14489 QueF-like protein NDR94_RS08575 PF04333 MlaA lipoprotein NDR94_RS08585 PF00072 Response regulator receiver domain NDR94_RS08595 PF00923 Transaldolase/Fructose-6-phosphate aldolase NDR94_RS08600 PF01207 Dihydrouridine synthase (Dus) NDR94_RS08605 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NDR94_RS08615 PF03480 Bacterial extracellular solute-binding protein, family 7 NDR94_RS08620 PF07519 Tannase and feruloyl esterase NDR94_RS08625 PF12833 Helix-turn-helix domain NDR94_RS08625 PF14525 AraC-binding-like domain NDR94_RS08630 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NDR94_RS08630 PF00355 Rieske [2Fe-2S] domain NDR94_RS08635 PF00866 Ring hydroxylating beta subunit NDR94_RS08640 PF00175 Oxidoreductase NAD-binding domain NDR94_RS08640 PF00970 Oxidoreductase FAD-binding domain NDR94_RS08640 PF00111 2Fe-2S iron-sulfur cluster binding domain NDR94_RS08645 PF00106 short chain dehydrogenase NDR94_RS08650 PF07690 Major Facilitator Superfamily NDR94_RS08655 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NDR94_RS08655 PF13378 Enolase C-terminal domain-like NDR94_RS08660 PF02426 Muconolactone delta-isomerase NDR94_RS08665 PF00775 Dioxygenase NDR94_RS08665 PF04444 Catechol dioxygenase N terminus NDR94_RS08670 PF03594 Benzoate membrane transport protein NDR94_RS08675 PF03573 outer membrane porin, OprD family NDR94_RS08705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS08705 PF13426 PAS domain NDR94_RS08705 PF00072 Response regulator receiver domain NDR94_RS08710 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDR94_RS08710 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NDR94_RS08715 PF10415 Fumarase C C-terminus NDR94_RS08715 PF00206 Lyase NDR94_RS08725 PF01722 BolA-like protein NDR94_RS08730 PF00581 Rhodanese-like domain NDR94_RS08730 PF17773 UPF0176 acylphosphatase like domain NDR94_RS08740 PF00664 ABC transporter transmembrane region NDR94_RS08740 PF00005 ABC transporter NDR94_RS08745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS08745 PF16591 Helical bimodular sensor domain NDR94_RS08745 PF00672 HAMP domain NDR94_RS08755 PF00472 RF-1 domain NDR94_RS08765 PF10011 Predicted membrane protein (DUF2254) NDR94_RS08770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS08770 PF03466 LysR substrate binding domain NDR94_RS08780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NDR94_RS08780 PF02770 Acyl-CoA dehydrogenase, middle domain NDR94_RS08780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NDR94_RS08785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NDR94_RS08790 PF03972 MmgE/PrpD family NDR94_RS08795 PF02515 CoA-transferase family III NDR94_RS08800 PF03328 HpcH/HpaI aldolase/citrate lyase family NDR94_RS08805 PF03480 Bacterial extracellular solute-binding protein, family 7 NDR94_RS08830 PF01348 Type II intron maturase NDR94_RS08830 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NDR94_RS08840 PF00005 ABC transporter NDR94_RS08840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NDR94_RS08845 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS08845 PF12911 N-terminal TM domain of oligopeptide transport permease C NDR94_RS08850 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS08855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NDR94_RS08860 PF07715 TonB-dependent Receptor Plug Domain NDR94_RS08860 PF00593 TonB dependent receptor NDR94_RS08865 PF02472 Biopolymer transport protein ExbD/TolR NDR94_RS08870 PF01618 MotA/TolQ/ExbB proton channel family NDR94_RS08875 PF03544 Gram-negative bacterial TonB protein C-terminal NDR94_RS08885 PF01523 Putative modulator of DNA gyrase NDR94_RS08890 PF00682 HMGL-like NDR94_RS08895 PF02515 CoA-transferase family III NDR94_RS08905 PF03480 Bacterial extracellular solute-binding protein, family 7 NDR94_RS08910 PF10011 Predicted membrane protein (DUF2254) NDR94_RS08920 PF16177 Acetyl-coenzyme A synthetase N-terminus NDR94_RS08920 PF00501 AMP-binding enzyme NDR94_RS08920 PF13193 AMP-binding enzyme C-terminal domain NDR94_RS08930 PF00326 Prolyl oligopeptidase family NDR94_RS08930 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NDR94_RS08935 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NDR94_RS08935 PF00378 Enoyl-CoA hydratase/isomerase NDR94_RS08935 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NDR94_RS08940 PF00108 Thiolase, N-terminal domain NDR94_RS08940 PF02803 Thiolase, C-terminal domain NDR94_RS08950 PF01396 Topoisomerase DNA binding C4 zinc finger NDR94_RS08950 PF01751 Toprim domain NDR94_RS08950 PF01131 DNA topoisomerase NDR94_RS08950 PF08272 Topoisomerase I zinc-ribbon-like NDR94_RS08960 PF00892 EamA-like transporter family NDR94_RS08970 PF03846 Cell division inhibitor SulA NDR94_RS08975 PF00717 Peptidase S24-like NDR94_RS08975 PF01726 LexA DNA binding domain NDR94_RS08980 PF00440 Bacterial regulatory proteins, tetR family NDR94_RS08990 PF00933 Glycosyl hydrolase family 3 N terminal domain NDR94_RS08995 PF01048 Phosphorylase superfamily NDR94_RS09005 PF07516 SecA Wing and Scaffold domain NDR94_RS09005 PF01043 SecA preprotein cross-linking domain NDR94_RS09005 PF07517 SecA DEAD-like domain NDR94_RS09005 PF02810 SEC-C motif NDR94_RS09015 PF01804 Penicillin amidase NDR94_RS09020 PF18389 TrmO C-terminal domain NDR94_RS09020 PF01980 tRNA-methyltransferase O NDR94_RS09025 PF00291 Pyridoxal-phosphate dependent enzyme NDR94_RS09030 PF02028 BCCT, betaine/carnitine/choline family transporter NDR94_RS09035 PF00171 Aldehyde dehydrogenase family NDR94_RS09040 PF05199 GMC oxidoreductase NDR94_RS09040 PF00732 GMC oxidoreductase NDR94_RS09045 PF04055 Radical SAM superfamily NDR94_RS09045 PF18693 TRAM domain NDR94_RS09045 PF00919 Uncharacterized protein family UPF0004 NDR94_RS09070 PF13439 Glycosyltransferase Family 4 NDR94_RS09070 PF00534 Glycosyl transferases group 1 NDR94_RS09080 PF13439 Glycosyltransferase Family 4 NDR94_RS09080 PF00534 Glycosyl transferases group 1 NDR94_RS09095 PF00534 Glycosyl transferases group 1 NDR94_RS09095 PF13439 Glycosyltransferase Family 4 NDR94_RS09100 PF02357 Transcription termination factor nusG NDR94_RS09110 PF13614 AAA domain NDR94_RS09110 PF13807 G-rich domain on putative tyrosine kinase NDR94_RS09110 PF02706 Chain length determinant protein NDR94_RS09115 PF00535 Glycosyl transferase family 2 NDR94_RS09125 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NDR94_RS09155 PF01207 Dihydrouridine synthase (Dus) NDR94_RS09165 PF00011 Hsp20/alpha crystallin family NDR94_RS09170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS09175 PF00330 Aconitase family (aconitate hydratase) NDR94_RS09180 PF00694 Aconitase C-terminal domain NDR94_RS09185 PF00180 Isocitrate/isopropylmalate dehydrogenase NDR94_RS09190 PF01118 Semialdehyde dehydrogenase, NAD binding domain NDR94_RS09190 PF02774 Semialdehyde dehydrogenase, dimerisation domain NDR94_RS09195 PF01118 Semialdehyde dehydrogenase, NAD binding domain NDR94_RS09195 PF02774 Semialdehyde dehydrogenase, dimerisation domain NDR94_RS09205 PF01416 tRNA pseudouridine synthase NDR94_RS09210 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NDR94_RS09215 PF17848 Acetyl-coA carboxylase zinc finger domain NDR94_RS09215 PF01039 Carboxyl transferase domain NDR94_RS09220 PF08245 Mur ligase middle domain NDR94_RS09220 PF02875 Mur ligase family, glutamate ligase domain NDR94_RS09225 PF05036 Sporulation related domain NDR94_RS09230 PF02674 Colicin V production protein NDR94_RS09235 PF00156 Phosphoribosyl transferase domain NDR94_RS09240 PF01053 Cys/Met metabolism PLP-dependent enzyme NDR94_RS09245 PF03958 Bacterial type II/III secretion system short domain NDR94_RS09245 PF00263 Bacterial type II and III secretion system protein NDR94_RS09265 PF09278 MerR, DNA binding NDR94_RS09265 PF00376 MerR family regulatory protein NDR94_RS09270 PF01810 LysE type translocator NDR94_RS09290 PF02514 CobN/Magnesium Chelatase NDR94_RS09295 PF00593 TonB dependent receptor NDR94_RS09295 PF07715 TonB-dependent Receptor Plug Domain NDR94_RS09300 PF01197 Ribosomal protein L31 NDR94_RS09305 PF01212 Beta-eliminating lyase NDR94_RS09310 PF03466 LysR substrate binding domain NDR94_RS09310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS09315 PF03358 NADPH-dependent FMN reductase NDR94_RS09320 PF07690 Major Facilitator Superfamily NDR94_RS09330 PF03707 Bacterial signalling protein N terminal repeat NDR94_RS09330 PF00563 EAL domain NDR94_RS09330 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS09340 PF01447 Thermolysin metallopeptidase, catalytic domain NDR94_RS09340 PF02868 Thermolysin metallopeptidase, alpha-helical domain NDR94_RS09340 PF16485 Protealysin propeptide NDR94_RS09345 PF01654 Cytochrome bd terminal oxidase subunit I NDR94_RS09350 PF02322 Cytochrome bd terminal oxidase subunit II NDR94_RS09360 PF12833 Helix-turn-helix domain NDR94_RS09360 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NDR94_RS09370 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NDR94_RS09370 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDR94_RS09395 PF01554 MatE NDR94_RS09400 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NDR94_RS09400 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NDR94_RS09400 PF11890 Domain of unknown function (DUF3410) NDR94_RS09405 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NDR94_RS09405 PF01348 Type II intron maturase NDR94_RS09410 PF12170 DNA polymerase III tau subunit V interacting with alpha NDR94_RS09410 PF12169 DNA polymerase III subunits gamma and tau domain III NDR94_RS09410 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NDR94_RS09415 PF02575 YbaB/EbfC DNA-binding family NDR94_RS09420 PF02132 RecR protein NDR94_RS09420 PF13662 Toprim domain NDR94_RS09430 PF00005 ABC transporter NDR94_RS09435 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS09445 PF02630 SCO1/SenC NDR94_RS09450 PF00156 Phosphoribosyl transferase domain NDR94_RS09455 PF00027 Cyclic nucleotide-binding domain NDR94_RS09455 PF00325 Bacterial regulatory proteins, crp family NDR94_RS09460 PF06969 HemN C-terminal domain NDR94_RS09460 PF04055 Radical SAM superfamily NDR94_RS09465 PF02540 NAD synthase NDR94_RS09480 PF00403 Heavy-metal-associated domain NDR94_RS09490 PF12801 4Fe-4S binding domain NDR94_RS09490 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase NDR94_RS09490 PF13746 4Fe-4S dicluster domain NDR94_RS09495 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NDR94_RS09495 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP NDR94_RS09510 PF00115 Cytochrome C and Quinol oxidase polypeptide I NDR94_RS09515 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NDR94_RS09515 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP NDR94_RS09525 PF00115 Cytochrome C and Quinol oxidase polypeptide I NDR94_RS09535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS09535 PF08447 PAS fold NDR94_RS09540 PF00330 Aconitase family (aconitate hydratase) NDR94_RS09540 PF00694 Aconitase C-terminal domain NDR94_RS09545 PF01728 FtsJ-like methyltransferase NDR94_RS09545 PF18125 RlmM ferredoxin-like domain NDR94_RS09550 PF01206 Sulfurtransferase TusA NDR94_RS09565 PF00115 Cytochrome C and Quinol oxidase polypeptide I NDR94_RS09570 PF00034 Cytochrome c NDR94_RS09570 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NDR94_RS09570 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NDR94_RS09585 PF00027 Cyclic nucleotide-binding domain NDR94_RS09585 PF00520 Ion transport protein NDR94_RS09590 PF06463 Molybdenum Cofactor Synthesis C NDR94_RS09590 PF04055 Radical SAM superfamily NDR94_RS09595 PF02463 RecF/RecN/SMC N terminal domain NDR94_RS09600 PF04354 ZipA, C-terminal FtsZ-binding domain NDR94_RS09605 PF00533 BRCA1 C Terminus (BRCT) domain NDR94_RS09605 PF01653 NAD-dependent DNA ligase adenylation domain NDR94_RS09605 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NDR94_RS09605 PF12826 Helix-hairpin-helix motif NDR94_RS09605 PF03120 NAD-dependent DNA ligase OB-fold domain NDR94_RS09630 PF07196 Flagellin hook IN motif NDR94_RS09630 PF07195 Flagellar hook-associated protein 2 C-terminus NDR94_RS09630 PF02465 Flagellar hook-associated protein 2 N-terminus NDR94_RS09645 PF02561 Flagellar protein FliS NDR94_RS09655 PF06865 Pyrimidine/purine nucleoside phosphorylase NDR94_RS09665 PF03692 Putative zinc- or iron-chelating domain NDR94_RS09670 PF00285 Citrate synthase, C-terminal domain NDR94_RS09675 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NDR94_RS09680 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NDR94_RS09685 PF02910 Fumarate reductase flavoprotein C-term NDR94_RS09685 PF00890 FAD binding domain NDR94_RS09690 PF13085 2Fe-2S iron-sulfur cluster binding domain NDR94_RS09695 PF02779 Transketolase, pyrimidine binding domain NDR94_RS09695 PF16870 2-oxoglutarate dehydrogenase C-terminal NDR94_RS09695 PF00676 Dehydrogenase E1 component NDR94_RS09695 PF16078 2-oxoglutarate dehydrogenase N-terminus NDR94_RS09700 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NDR94_RS09700 PF00364 Biotin-requiring enzyme NDR94_RS09700 PF02817 e3 binding domain NDR94_RS09705 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDR94_RS09705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NDR94_RS09710 PF08442 ATP-grasp domain NDR94_RS09710 PF00549 CoA-ligase NDR94_RS09715 PF00549 CoA-ligase NDR94_RS09715 PF02629 CoA binding domain NDR94_RS09720 PF05525 Branched-chain amino acid transport protein NDR94_RS09745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS09745 PF00183 Hsp90 protein NDR94_RS09765 PF00672 HAMP domain NDR94_RS09765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS09765 PF12729 Four helix bundle sensory module for signal transduction NDR94_RS09770 PF12729 Four helix bundle sensory module for signal transduction NDR94_RS09770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS09770 PF00672 HAMP domain NDR94_RS09775 PF00375 Sodium:dicarboxylate symporter family NDR94_RS09780 PF00109 Beta-ketoacyl synthase, N-terminal domain NDR94_RS09780 PF02801 Beta-ketoacyl synthase, C-terminal domain NDR94_RS09785 PF07977 FabA-like domain NDR94_RS09790 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NDR94_RS09790 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NDR94_RS09805 PF03061 Thioesterase superfamily NDR94_RS09825 PF01594 AI-2E family transporter NDR94_RS09830 PF01734 Patatin-like phospholipase NDR94_RS09835 PF00586 AIR synthase related protein, N-terminal domain NDR94_RS09835 PF02769 AIR synthase related protein, C-terminal domain NDR94_RS09850 PF07726 ATPase family associated with various cellular activities (AAA) NDR94_RS09850 PF17863 AAA lid domain NDR94_RS09860 PF01841 Transglutaminase-like superfamily NDR94_RS09860 PF13559 Domain of unknown function (DUF4129) NDR94_RS09860 PF11992 Domain of unknown function (DUF3488) NDR94_RS09880 PF09335 SNARE associated Golgi protein NDR94_RS09890 PF00106 short chain dehydrogenase NDR94_RS09895 PF02803 Thiolase, C-terminal domain NDR94_RS09895 PF00108 Thiolase, N-terminal domain NDR94_RS09900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NDR94_RS09900 PF02770 Acyl-CoA dehydrogenase, middle domain NDR94_RS09900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NDR94_RS09905 PF00501 AMP-binding enzyme NDR94_RS09905 PF13193 AMP-binding enzyme C-terminal domain NDR94_RS09910 PF02515 CoA-transferase family III NDR94_RS09920 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NDR94_RS09920 PF13542 Helix-turn-helix domain of transposase family ISL3 NDR94_RS09920 PF01610 Transposase NDR94_RS09925 PF02770 Acyl-CoA dehydrogenase, middle domain NDR94_RS09925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NDR94_RS09925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NDR94_RS09930 PF00378 Enoyl-CoA hydratase/isomerase NDR94_RS09935 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NDR94_RS09935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NDR94_RS09940 PF00378 Enoyl-CoA hydratase/isomerase NDR94_RS09945 PF00171 Aldehyde dehydrogenase family NDR94_RS09960 PF00343 Carbohydrate phosphorylase NDR94_RS09960 PF11897 Protein of unknown function (DUF3417) NDR94_RS09975 PF12833 Helix-turn-helix domain NDR94_RS09990 PF08239 Bacterial SH3 domain NDR94_RS09995 PF13426 PAS domain NDR94_RS09995 PF00072 Response regulator receiver domain NDR94_RS09995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS10000 PF02386 Cation transport protein NDR94_RS10015 PF01568 Molydopterin dinucleotide binding domain NDR94_RS10015 PF00384 Molybdopterin oxidoreductase NDR94_RS10020 PF02634 FdhD/NarQ family NDR94_RS10025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS10025 PF03466 LysR substrate binding domain NDR94_RS10030 PF12833 Helix-turn-helix domain NDR94_RS10030 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NDR94_RS10035 PF08447 PAS fold NDR94_RS10035 PF00563 EAL domain NDR94_RS10035 PF13426 PAS domain NDR94_RS10035 PF08448 PAS fold NDR94_RS10035 PF05231 MASE1 NDR94_RS10035 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS10045 PF02333 Phytase NDR94_RS10050 PF01618 MotA/TolQ/ExbB proton channel family NDR94_RS10055 PF02472 Biopolymer transport protein ExbD/TolR NDR94_RS10070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS10070 PF13188 PAS domain NDR94_RS10070 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS10070 PF00072 Response regulator receiver domain NDR94_RS10070 PF08448 PAS fold NDR94_RS10075 PF00580 UvrD/REP helicase N-terminal domain NDR94_RS10075 PF13361 UvrD-like helicase C-terminal domain NDR94_RS10075 PF12462 DNA helicase IV / RNA helicase N terminal NDR94_RS10080 PF00069 Protein kinase domain NDR94_RS10090 PF18267 Rubredoxin NAD+ reductase C-terminal domain NDR94_RS10090 PF04324 BFD-like [2Fe-2S] binding domain NDR94_RS10090 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NDR94_RS10090 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NDR94_RS10090 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDR94_RS10090 PF13806 Rieske-like [2Fe-2S] domain NDR94_RS10095 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDR94_RS10095 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NDR94_RS10095 PF13806 Rieske-like [2Fe-2S] domain NDR94_RS10095 PF04324 BFD-like [2Fe-2S] binding domain NDR94_RS10095 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NDR94_RS10095 PF18267 Rubredoxin NAD+ reductase C-terminal domain NDR94_RS10100 PF02146 Sir2 family NDR94_RS10110 PF12729 Four helix bundle sensory module for signal transduction NDR94_RS10110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS10110 PF00672 HAMP domain NDR94_RS10130 PF00106 short chain dehydrogenase NDR94_RS10140 PF03441 FAD binding domain of DNA photolyase NDR94_RS10140 PF00875 DNA photolyase NDR94_RS10145 PF13411 MerR HTH family regulatory protein NDR94_RS10150 PF08349 Protein of unknown function (DUF1722) NDR94_RS10155 PF08338 Domain of unknown function (DUF1731) NDR94_RS10155 PF01370 NAD dependent epimerase/dehydratase family NDR94_RS10160 PF00762 Ferrochelatase NDR94_RS10165 PF00563 EAL domain NDR94_RS10165 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS10165 PF03707 Bacterial signalling protein N terminal repeat NDR94_RS10170 PF01740 STAS domain NDR94_RS10170 PF13426 PAS domain NDR94_RS10190 PF02152 Dihydroneopterin aldolase NDR94_RS10195 PF01227 GTP cyclohydrolase I NDR94_RS10205 PF13411 MerR HTH family regulatory protein NDR94_RS10210 PF00675 Insulinase (Peptidase family M16) NDR94_RS10210 PF05193 Peptidase M16 inactive domain NDR94_RS10225 PF00072 Response regulator receiver domain NDR94_RS10225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS10225 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS10225 PF09456 RcsC Alpha-Beta-Loop (ABL) NDR94_RS10230 PF13409 Glutathione S-transferase, N-terminal domain NDR94_RS10235 PF02885 Glycosyl transferase family, helical bundle domain NDR94_RS10235 PF00591 Glycosyl transferase family, a/b domain NDR94_RS10240 PF04358 DsrC like protein NDR94_RS10250 PF02635 DsrE/DsrF-like family NDR94_RS10255 PF02635 DsrE/DsrF-like family NDR94_RS10265 PF01027 Inhibitor of apoptosis-promoting Bax1 NDR94_RS10280 PF08361 MAATS-type transcriptional repressor, C-terminal region NDR94_RS10280 PF00440 Bacterial regulatory proteins, tetR family NDR94_RS10290 PF00120 Glutamine synthetase, catalytic domain NDR94_RS10295 PF00561 alpha/beta hydrolase fold NDR94_RS10300 PF00005 ABC transporter NDR94_RS10305 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS10315 PF00857 Isochorismatase family NDR94_RS10320 PF02633 Creatinine amidohydrolase NDR94_RS10345 PF09084 NMT1/THI5 like NDR94_RS10350 PF00248 Aldo/keto reductase family NDR94_RS10355 PF01425 Amidase NDR94_RS10360 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NDR94_RS10360 PF00289 Biotin carboxylase, N-terminal domain NDR94_RS10360 PF02785 Biotin carboxylase C-terminal domain NDR94_RS10375 PF00005 ABC transporter NDR94_RS10375 PF08402 TOBE domain NDR94_RS10385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS10385 PF00672 HAMP domain NDR94_RS10385 PF12729 Four helix bundle sensory module for signal transduction NDR94_RS10390 PF01026 TatD related DNase NDR94_RS10395 PF00497 Bacterial extracellular solute-binding proteins, family 3 NDR94_RS10395 PF01464 Transglycosylase SLT domain NDR94_RS10400 PF03280 Proteobacterial lipase chaperone protein NDR94_RS10405 PF00561 alpha/beta hydrolase fold NDR94_RS10410 PF03449 Transcription elongation factor, N-terminal NDR94_RS10410 PF01272 Transcription elongation factor, GreA/GreB, C-term NDR94_RS10420 PF00005 ABC transporter NDR94_RS10425 PF13472 GDSL-like Lipase/Acylhydrolase family NDR94_RS10435 PF17969 L,D-transpeptidase C-terminal domain NDR94_RS10435 PF03734 L,D-transpeptidase catalytic domain NDR94_RS10440 PF11839 Alanine-zipper, major outer membrane lipoprotein NDR94_RS10450 PF00793 DAHP synthetase I family NDR94_RS10455 PF08546 Ketopantoate reductase PanE/ApbA C terminal NDR94_RS10455 PF02558 Ketopantoate reductase PanE/ApbA NDR94_RS10460 PF03466 LysR substrate binding domain NDR94_RS10460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS10465 PF01507 Phosphoadenosine phosphosulfate reductase family NDR94_RS10475 PF00425 chorismate binding enzyme NDR94_RS10475 PF04715 Anthranilate synthase component I, N terminal region NDR94_RS10495 PF00392 Bacterial regulatory proteins, gntR family NDR94_RS10495 PF07729 FCD domain NDR94_RS10505 PF00285 Citrate synthase, C-terminal domain NDR94_RS10510 PF00694 Aconitase C-terminal domain NDR94_RS10510 PF00330 Aconitase family (aconitate hydratase) NDR94_RS10515 PF04303 PrpF protein NDR94_RS10520 PF03618 Kinase/pyrophosphorylase NDR94_RS10525 PF02896 PEP-utilising enzyme, TIM barrel domain NDR94_RS10525 PF00391 PEP-utilising enzyme, mobile domain NDR94_RS10525 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NDR94_RS10530 PF03737 Aldolase/RraA NDR94_RS10535 PF01544 CorA-like Mg2+ transporter protein NDR94_RS10545 PF05552 Conserved TM helix NDR94_RS10555 PF00691 OmpA family NDR94_RS10555 PF05736 OprF membrane domain NDR94_RS10560 PF11791 Aconitate B N-terminal domain NDR94_RS10560 PF00330 Aconitase family (aconitate hydratase) NDR94_RS10560 PF06434 Aconitate hydratase 2 N-terminus NDR94_RS10575 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) NDR94_RS10580 PF00149 Calcineurin-like phosphoesterase NDR94_RS10585 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NDR94_RS10590 PF00749 tRNA synthetases class I (E and Q), catalytic domain NDR94_RS10590 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NDR94_RS10595 PF01406 tRNA synthetases class I (C) catalytic domain NDR94_RS10595 PF09190 DALR domain NDR94_RS10600 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NDR94_RS10600 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NDR94_RS10620 PF00392 Bacterial regulatory proteins, gntR family NDR94_RS10620 PF07729 FCD domain NDR94_RS10630 PF05697 Bacterial trigger factor protein (TF) NDR94_RS10630 PF05698 Bacterial trigger factor protein (TF) C-terminus NDR94_RS10630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NDR94_RS10635 PF00574 Clp protease NDR94_RS10640 PF10431 C-terminal, D2-small domain, of ClpB protein NDR94_RS10640 PF07724 AAA domain (Cdc48 subfamily) NDR94_RS10640 PF06689 ClpX C4-type zinc finger NDR94_RS10645 PF05362 Lon protease (S16) C-terminal proteolytic domain NDR94_RS10645 PF02190 ATP-dependent protease La (LON) substrate-binding domain NDR94_RS10645 PF00004 ATPase family associated with various cellular activities (AAA) NDR94_RS10650 PF00216 Bacterial DNA-binding protein NDR94_RS10655 PF00639 PPIC-type PPIASE domain NDR94_RS10655 PF09312 SurA N-terminal domain NDR94_RS10660 PF00266 Aminotransferase class-V NDR94_RS10670 PF04055 Radical SAM superfamily NDR94_RS10670 PF13186 Iron-sulfur cluster-binding domain NDR94_RS10675 PF05402 Coenzyme PQQ synthesis protein D (PqqD) NDR94_RS10685 PF00171 Aldehyde dehydrogenase family NDR94_RS10690 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDR94_RS10690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NDR94_RS10695 PF08042 PqqA family NDR94_RS10700 PF12706 Beta-lactamase superfamily domain NDR94_RS10705 PF03070 TENA/THI-4/PQQC family NDR94_RS10710 PF05402 Coenzyme PQQ synthesis protein D (PqqD) NDR94_RS10715 PF04055 Radical SAM superfamily NDR94_RS10715 PF13186 Iron-sulfur cluster-binding domain NDR94_RS10720 PF00326 Prolyl oligopeptidase family NDR94_RS10725 PF00465 Iron-containing alcohol dehydrogenase NDR94_RS10730 PF00672 HAMP domain NDR94_RS10730 PF00989 PAS fold NDR94_RS10730 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS10730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS10730 PF18698 Histidine kinase sensor domain NDR94_RS10745 PF00529 HlyD membrane-fusion protein of T1SS NDR94_RS10745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NDR94_RS10750 PF00873 AcrB/AcrD/AcrF family NDR94_RS10760 PF00072 Response regulator receiver domain NDR94_RS10760 PF00196 Bacterial regulatory proteins, luxR family NDR94_RS10765 PF01541 GIY-YIG catalytic domain NDR94_RS10765 PF02151 UvrB/uvrC motif NDR94_RS10765 PF08459 UvrC Helix-hairpin-helix N-terminal NDR94_RS10770 PF01066 CDP-alcohol phosphatidyltransferase NDR94_RS10805 PF01758 Sodium Bile acid symporter family NDR94_RS10815 PF01022 Bacterial regulatory protein, arsR family NDR94_RS10820 PF03358 NADPH-dependent FMN reductase NDR94_RS10830 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NDR94_RS10835 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NDR94_RS10835 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NDR94_RS10860 PF09722 Protein of unknown function (DUF2384) NDR94_RS10875 PF08774 VRR-NUC domain NDR94_RS10875 PF18081 Fanconi anemia-associated nuclease SAP domain NDR94_RS10880 PF04055 Radical SAM superfamily NDR94_RS10880 PF06969 HemN C-terminal domain NDR94_RS10885 PF00672 HAMP domain NDR94_RS10885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS10885 PF12729 Four helix bundle sensory module for signal transduction NDR94_RS10890 PF00483 Nucleotidyl transferase NDR94_RS10895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NDR94_RS10900 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDR94_RS10900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NDR94_RS10910 PF14572 Phosphoribosyl synthetase-associated domain NDR94_RS10910 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NDR94_RS10930 PF04632 Fusaric acid resistance protein family NDR94_RS10935 PF07869 Protein of unknown function (DUF1656) NDR94_RS10940 PF13533 Biotin-lipoyl like NDR94_RS10945 PF02321 Outer membrane efflux protein NDR94_RS10950 PF03466 LysR substrate binding domain NDR94_RS10950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS10965 PF00355 Rieske [2Fe-2S] domain NDR94_RS10975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NDR94_RS10975 PF00205 Thiamine pyrophosphate enzyme, central domain NDR94_RS10975 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NDR94_RS10980 PF13298 DNA polymerase Ligase (LigD) NDR94_RS10980 PF04679 ATP dependent DNA ligase C terminal region NDR94_RS10980 PF01068 ATP dependent DNA ligase domain NDR94_RS11000 PF05974 Domain of unknown function (DUF892) NDR94_RS11005 PF00924 Mechanosensitive ion channel NDR94_RS11005 PF12794 Mechanosensitive ion channel inner membrane domain 1 NDR94_RS11005 PF12795 Mechanosensitive ion channel porin domain NDR94_RS11010 PF00994 Probable molybdopterin binding domain NDR94_RS11010 PF18146 Damage-inducible protein CinA KH domain NDR94_RS11010 PF02464 Competence-damaged protein NDR94_RS11015 PF08323 Starch synthase catalytic domain NDR94_RS11015 PF00534 Glycosyl transferases group 1 NDR94_RS11020 PF00128 Alpha amylase, catalytic domain NDR94_RS11020 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NDR94_RS11020 PF11941 Domain of unknown function (DUF3459) NDR94_RS11025 PF02446 4-alpha-glucanotransferase NDR94_RS11030 PF00128 Alpha amylase, catalytic domain NDR94_RS11040 PF00128 Alpha amylase, catalytic domain NDR94_RS11040 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NDR94_RS11045 PF08525 Opacity-associated protein A N-terminal motif NDR94_RS11045 PF01551 Peptidase family M23 NDR94_RS11045 PF01476 LysM domain NDR94_RS11055 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NDR94_RS11060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS11060 PF03466 LysR substrate binding domain NDR94_RS11065 PF13823 Alcohol dehydrogenase GroES-associated NDR94_RS11065 PF00107 Zinc-binding dehydrogenase NDR94_RS11065 PF08240 Alcohol dehydrogenase GroES-like domain NDR94_RS11075 PF03372 Endonuclease/Exonuclease/phosphatase family NDR94_RS11080 PF13091 PLD-like domain NDR94_RS11085 PF03706 Lysylphosphatidylglycerol synthase TM region NDR94_RS11090 PF00128 Alpha amylase, catalytic domain NDR94_RS11090 PF02806 Alpha amylase, C-terminal all-beta domain NDR94_RS11090 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NDR94_RS11095 PF16657 Maltogenic Amylase, C-terminal domain NDR94_RS11095 PF00128 Alpha amylase, catalytic domain NDR94_RS11100 PF11896 Domain of unknown function (DUF3416) NDR94_RS11100 PF00128 Alpha amylase, catalytic domain NDR94_RS11110 PF04216 Protein involved in formate dehydrogenase formation NDR94_RS11115 PF01292 Prokaryotic cytochrome b561 NDR94_RS11120 PF13247 4Fe-4S dicluster domain NDR94_RS11120 PF12800 4Fe-4S binding domain NDR94_RS11120 PF09163 Formate dehydrogenase N, transmembrane NDR94_RS11130 PF13298 DNA polymerase Ligase (LigD) NDR94_RS11130 PF01068 ATP dependent DNA ligase domain NDR94_RS11130 PF04679 ATP dependent DNA ligase C terminal region NDR94_RS11135 PF02735 Ku70/Ku80 beta-barrel domain NDR94_RS11145 PF08659 KR domain NDR94_RS11145 PF00698 Acyl transferase domain NDR94_RS11145 PF08240 Alcohol dehydrogenase GroES-like domain NDR94_RS11145 PF16197 Ketoacyl-synthetase C-terminal extension NDR94_RS11145 PF02801 Beta-ketoacyl synthase, C-terminal domain NDR94_RS11145 PF14765 Polyketide synthase dehydratase NDR94_RS11145 PF00109 Beta-ketoacyl synthase, N-terminal domain NDR94_RS11145 PF00550 Phosphopantetheine attachment site NDR94_RS11150 PF03466 LysR substrate binding domain NDR94_RS11150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS11155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NDR94_RS11160 PF00873 AcrB/AcrD/AcrF family NDR94_RS11165 PF02321 Outer membrane efflux protein NDR94_RS11170 PF01909 Nucleotidyltransferase domain NDR94_RS11170 PF13427 Domain of unknown function (DUF4111) NDR94_RS11180 PF03480 Bacterial extracellular solute-binding protein, family 7 NDR94_RS11185 PF02321 Outer membrane efflux protein NDR94_RS11190 PF00873 AcrB/AcrD/AcrF family NDR94_RS11195 PF00873 AcrB/AcrD/AcrF family NDR94_RS11200 PF13533 Biotin-lipoyl like NDR94_RS11205 PF03023 Lipid II flippase MurJ NDR94_RS11215 PF08534 Redoxin NDR94_RS11220 PF01235 Sodium:alanine symporter family NDR94_RS11225 PF04357 TamB, inner membrane protein subunit of TAM complex NDR94_RS11230 PF17243 POTRA domain TamA domain 1 NDR94_RS11230 PF01103 Surface antigen NDR94_RS11230 PF07244 Surface antigen variable number repeat NDR94_RS11240 PF03372 Endonuclease/Exonuclease/phosphatase family NDR94_RS11245 PF12849 PBP superfamily domain NDR94_RS11250 PF00294 pfkB family carbohydrate kinase NDR94_RS11265 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS11270 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS11275 PF00005 ABC transporter NDR94_RS11275 PF17912 MalK OB fold domain NDR94_RS11280 PF08125 Mannitol dehydrogenase C-terminal domain NDR94_RS11280 PF01232 Mannitol dehydrogenase Rossmann domain NDR94_RS11285 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NDR94_RS11285 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NDR94_RS11290 PF02770 Acyl-CoA dehydrogenase, middle domain NDR94_RS11290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NDR94_RS11290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NDR94_RS11295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS11295 PF03466 LysR substrate binding domain NDR94_RS11300 PF00356 Bacterial regulatory proteins, lacI family NDR94_RS11305 PF03480 Bacterial extracellular solute-binding protein, family 7 NDR94_RS11310 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NDR94_RS11325 PF03969 AFG1-like ATPase NDR94_RS11330 PF03466 LysR substrate binding domain NDR94_RS11330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS11335 PF01266 FAD dependent oxidoreductase NDR94_RS11350 PF12848 ABC transporter NDR94_RS11350 PF00005 ABC transporter NDR94_RS11355 PF02673 Bacitracin resistance protein BacA NDR94_RS11360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS11360 PF17200 Single Cache domain 2 NDR94_RS11360 PF00672 HAMP domain NDR94_RS11375 PF04239 Protein of unknown function (DUF421) NDR94_RS11390 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS11390 PF05230 MASE2 domain NDR94_RS11395 PF00072 Response regulator receiver domain NDR94_RS11405 PF01106 NifU-like domain NDR94_RS11405 PF01521 Iron-sulphur cluster biosynthesis NDR94_RS11415 PF02965 Vitamin B12 dependent methionine synthase, activation domain NDR94_RS11415 PF02574 Homocysteine S-methyltransferase NDR94_RS11415 PF02310 B12 binding domain NDR94_RS11415 PF00809 Pterin binding enzyme NDR94_RS11415 PF02607 B12 binding domain NDR94_RS11425 PF01757 Acyltransferase family NDR94_RS11450 PF07690 Major Facilitator Superfamily NDR94_RS11455 PF04055 Radical SAM superfamily NDR94_RS11470 PF00011 Hsp20/alpha crystallin family NDR94_RS11480 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NDR94_RS11480 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NDR94_RS11490 PF08240 Alcohol dehydrogenase GroES-like domain NDR94_RS11490 PF00107 Zinc-binding dehydrogenase NDR94_RS11495 PF01343 Peptidase family S49 NDR94_RS11495 PF08496 Peptidase family S49 N-terminal NDR94_RS11525 PF01925 Sulfite exporter TauE/SafE NDR94_RS11530 PF00293 NUDIX domain NDR94_RS11530 PF09297 NADH pyrophosphatase zinc ribbon domain NDR94_RS11530 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NDR94_RS11540 PF00378 Enoyl-CoA hydratase/isomerase NDR94_RS11545 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NDR94_RS11545 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain NDR94_RS11545 PF01276 Orn/Lys/Arg decarboxylase, major domain NDR94_RS11550 PF00929 Exonuclease NDR94_RS11555 PF00075 RNase H NDR94_RS11565 PF00753 Metallo-beta-lactamase superfamily NDR94_RS11565 PF16123 Hydroxyacylglutathione hydrolase C-terminus NDR94_RS11570 PF01476 LysM domain NDR94_RS11570 PF01464 Transglycosylase SLT domain NDR94_RS11580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NDR94_RS11585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NDR94_RS11590 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS11595 PF12911 N-terminal TM domain of oligopeptide transport permease C NDR94_RS11595 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS11600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NDR94_RS11600 PF00005 ABC transporter NDR94_RS11615 PF12833 Helix-turn-helix domain NDR94_RS11620 PF01011 PQQ enzyme repeat NDR94_RS11620 PF13360 PQQ-like domain NDR94_RS11630 PF16123 Hydroxyacylglutathione hydrolase C-terminus NDR94_RS11630 PF00753 Metallo-beta-lactamase superfamily NDR94_RS11640 PF01464 Transglycosylase SLT domain NDR94_RS11640 PF00497 Bacterial extracellular solute-binding proteins, family 3 NDR94_RS11645 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NDR94_RS11650 PF01011 PQQ enzyme repeat NDR94_RS11650 PF13360 PQQ-like domain NDR94_RS11660 PF13426 PAS domain NDR94_RS11660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS11660 PF08447 PAS fold NDR94_RS11680 PF00196 Bacterial regulatory proteins, luxR family NDR94_RS11680 PF00072 Response regulator receiver domain NDR94_RS11685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS11685 PF05231 MASE1 NDR94_RS11685 PF07730 Histidine kinase NDR94_RS11695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS11695 PF00672 HAMP domain NDR94_RS11715 PF00005 ABC transporter NDR94_RS11730 PF00072 Response regulator receiver domain NDR94_RS11730 PF00196 Bacterial regulatory proteins, luxR family NDR94_RS11735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NDR94_RS11735 PF14824 Sirohaem biosynthesis protein central NDR94_RS11735 PF10414 Sirohaem synthase dimerisation region NDR94_RS11740 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NDR94_RS11740 PF02403 Seryl-tRNA synthetase N-terminal domain NDR94_RS11745 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NDR94_RS11750 PF12002 MgsA AAA+ ATPase C terminal NDR94_RS11750 PF16193 AAA C-terminal domain NDR94_RS11750 PF00004 ATPase family associated with various cellular activities (AAA) NDR94_RS11755 PF03548 Outer membrane lipoprotein carrier protein LolA NDR94_RS11760 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NDR94_RS11760 PF09397 Ftsk gamma domain NDR94_RS11760 PF01580 FtsK/SpoIIIE family NDR94_RS11760 PF17854 FtsK alpha domain NDR94_RS11765 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDR94_RS11770 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NDR94_RS11775 PF04376 Arginine-tRNA-protein transferase, N terminus NDR94_RS11775 PF04377 Arginine-tRNA-protein transferase, C terminus NDR94_RS11780 PF01176 Translation initiation factor 1A / IF-1 NDR94_RS11785 PF02861 Clp amino terminal domain, pathogenicity island component NDR94_RS11785 PF17871 AAA lid domain NDR94_RS11785 PF00004 ATPase family associated with various cellular activities (AAA) NDR94_RS11785 PF10431 C-terminal, D2-small domain, of ClpB protein NDR94_RS11785 PF07724 AAA domain (Cdc48 subfamily) NDR94_RS11790 PF02617 ATP-dependent Clp protease adaptor protein ClpS NDR94_RS11800 PF00180 Isocitrate/isopropylmalate dehydrogenase NDR94_RS11805 PF03971 Monomeric isocitrate dehydrogenase NDR94_RS11810 PF00293 NUDIX domain NDR94_RS11820 PF04356 Protein of unknown function (DUF489) NDR94_RS11825 PF08328 Adenylosuccinate lyase C-terminal NDR94_RS11825 PF00206 Lyase NDR94_RS11830 PF08007 Cupin superfamily protein NDR94_RS11835 PF13673 Acetyltransferase (GNAT) domain NDR94_RS11850 PF00463 Isocitrate lyase family NDR94_RS11860 PF01594 AI-2E family transporter NDR94_RS11870 PF13726 Na+-H+ antiporter family NDR94_RS11870 PF03553 Na+/H+ antiporter family NDR94_RS11875 PF01242 6-pyruvoyl tetrahydropterin synthase NDR94_RS11905 PF01979 Amidohydrolase family NDR94_RS11915 PF13419 Haloacid dehalogenase-like hydrolase NDR94_RS11920 PF00106 short chain dehydrogenase NDR94_RS11925 PF01479 S4 domain NDR94_RS11925 PF00849 RNA pseudouridylate synthase NDR94_RS11930 PF01081 KDPG and KHG aldolase NDR94_RS11935 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NDR94_RS11940 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NDR94_RS11940 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NDR94_RS11945 PF05175 Methyltransferase small domain NDR94_RS11955 PF01713 Smr domain NDR94_RS11960 PF01227 GTP cyclohydrolase I NDR94_RS11965 PF02798 Glutathione S-transferase, N-terminal domain NDR94_RS11970 PF00155 Aminotransferase class I and II NDR94_RS11980 PF00575 S1 RNA binding domain NDR94_RS11985 PF02224 Cytidylate kinase NDR94_RS11990 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NDR94_RS11995 PF00155 Aminotransferase class I and II NDR94_RS12000 PF01842 ACT domain NDR94_RS12000 PF01817 Chorismate mutase type II NDR94_RS12000 PF00800 Prephenate dehydratase NDR94_RS12005 PF00266 Aminotransferase class-V NDR94_RS12010 PF03989 DNA gyrase C-terminal domain, beta-propeller NDR94_RS12010 PF00521 DNA gyrase/topoisomerase IV, subunit A NDR94_RS12015 PF01008 Initiation factor 2 subunit family NDR94_RS12030 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NDR94_RS12030 PF01336 OB-fold nucleic acid binding domain NDR94_RS12030 PF02811 PHP domain NDR94_RS12030 PF14579 Helix-hairpin-helix motif NDR94_RS12030 PF07733 Bacterial DNA polymerase III alpha NTPase domain NDR94_RS12040 PF13362 Toprim domain NDR94_RS12040 PF18818 Metallopeptidase superfamily domain NDR94_RS12040 PF08401 Domain of unknown function (DUF1738) NDR94_RS12045 PF00291 Pyridoxal-phosphate dependent enzyme NDR94_RS12050 PF00497 Bacterial extracellular solute-binding proteins, family 3 NDR94_RS12055 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS12060 PF00005 ABC transporter NDR94_RS12065 PF00296 Luciferase-like monooxygenase NDR94_RS12070 PF02254 TrkA-N domain NDR94_RS12070 PF00999 Sodium/hydrogen exchanger family NDR94_RS12080 PF07724 AAA domain (Cdc48 subfamily) NDR94_RS12080 PF00004 ATPase family associated with various cellular activities (AAA) NDR94_RS12080 PF17871 AAA lid domain NDR94_RS12080 PF02861 Clp amino terminal domain, pathogenicity island component NDR94_RS12080 PF10431 C-terminal, D2-small domain, of ClpB protein NDR94_RS12095 PF00486 Transcriptional regulatory protein, C terminal NDR94_RS12095 PF00072 Response regulator receiver domain NDR94_RS12110 PF00216 Bacterial DNA-binding protein NDR94_RS12115 PF01588 Putative tRNA binding domain NDR94_RS12115 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NDR94_RS12115 PF03484 tRNA synthetase B5 domain NDR94_RS12115 PF03147 Ferredoxin-fold anticodon binding domain NDR94_RS12115 PF03483 B3/4 domain NDR94_RS12120 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NDR94_RS12120 PF01409 tRNA synthetases class II core domain (F) NDR94_RS12125 PF00453 Ribosomal protein L20 NDR94_RS12130 PF01632 Ribosomal protein L35 NDR94_RS12135 PF05198 Translation initiation factor IF-3, N-terminal domain NDR94_RS12135 PF00707 Translation initiation factor IF-3, C-terminal domain NDR94_RS12140 PF02824 TGS domain NDR94_RS12140 PF03129 Anticodon binding domain NDR94_RS12140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NDR94_RS12140 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NDR94_RS12150 PF01266 FAD dependent oxidoreductase NDR94_RS12175 PF12804 MobA-like NTP transferase domain NDR94_RS12195 PF03573 outer membrane porin, OprD family NDR94_RS12215 PF01966 HD domain NDR94_RS12225 PF04320 Protein with unknown function (DUF469) NDR94_RS12230 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NDR94_RS12235 PF10672 S-adenosylmethionine-dependent methyltransferase NDR94_RS12235 PF01170 Putative RNA methylase family UPF0020 NDR94_RS12235 PF02926 THUMP domain NDR94_RS12240 PF04957 Ribosome modulation factor NDR94_RS12245 PF01180 Dihydroorotate dehydrogenase NDR94_RS12260 PF05088 Bacterial NAD-glutamate dehydrogenase NDR94_RS12265 PF07726 ATPase family associated with various cellular activities (AAA) NDR94_RS12265 PF17863 AAA lid domain NDR94_RS12270 PF01882 Protein of unknown function DUF58 NDR94_RS12285 PF00092 von Willebrand factor type A domain NDR94_RS12285 PF07584 Aerotolerance regulator N-terminal NDR94_RS12300 PF08376 Nitrate and nitrite sensing NDR94_RS12300 PF03861 ANTAR domain NDR94_RS12315 PF00294 pfkB family carbohydrate kinase NDR94_RS12320 PF07690 Major Facilitator Superfamily NDR94_RS12325 PF00069 Protein kinase domain NDR94_RS12325 PF03793 PASTA domain NDR94_RS12335 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NDR94_RS12335 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDR94_RS12335 PF18267 Rubredoxin NAD+ reductase C-terminal domain NDR94_RS12335 PF04324 BFD-like [2Fe-2S] binding domain NDR94_RS12335 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NDR94_RS12340 PF00355 Rieske [2Fe-2S] domain NDR94_RS12345 PF04324 BFD-like [2Fe-2S] binding domain NDR94_RS12345 PF01568 Molydopterin dinucleotide binding domain NDR94_RS12345 PF00384 Molybdopterin oxidoreductase NDR94_RS12345 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NDR94_RS12350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NDR94_RS12360 PF14870 Photosynthesis system II assembly factor YCF48 NDR94_RS12365 PF01433 Peptidase family M1 domain NDR94_RS12365 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NDR94_RS12365 PF11940 Domain of unknown function (DUF3458) Ig-like fold NDR94_RS12380 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease NDR94_RS12380 PF01694 Rhomboid family NDR94_RS12385 PF00149 Calcineurin-like phosphoesterase NDR94_RS12390 PF01513 ATP-NAD kinase NDR94_RS12405 PF01925 Sulfite exporter TauE/SafE NDR94_RS12410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS12410 PF03466 LysR substrate binding domain NDR94_RS12420 PF17284 Spermidine synthase tetramerisation domain NDR94_RS12425 PF00730 HhH-GPD superfamily base excision DNA repair protein NDR94_RS12425 PF06029 AlkA N-terminal domain NDR94_RS12425 PF02805 Metal binding domain of Ada NDR94_RS12425 PF12833 Helix-turn-helix domain NDR94_RS12445 PF03079 ARD/ARD' family NDR94_RS12455 PF12832 MFS_1 like family NDR94_RS12460 PF01264 Chorismate synthase NDR94_RS12475 PF02264 LamB porin NDR94_RS12480 PF00005 ABC transporter NDR94_RS12480 PF08402 TOBE domain NDR94_RS12485 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS12490 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS12495 PF01547 Bacterial extracellular solute-binding protein NDR94_RS12500 PF00672 HAMP domain NDR94_RS12500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS12500 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS12505 PF00072 Response regulator receiver domain NDR94_RS12505 PF00486 Transcriptional regulatory protein, C terminal NDR94_RS12510 PF02685 Glucokinase NDR94_RS12515 PF00920 Dehydratase family NDR94_RS12520 PF04079 Segregation and condensation complex subunit ScpB NDR94_RS12525 PF02616 Segregation and condensation protein ScpA NDR94_RS12530 PF00579 tRNA synthetases class I (W and Y) NDR94_RS12535 PF01300 Telomere recombination NDR94_RS12540 PF02811 PHP domain NDR94_RS12545 PF03795 YCII-related domain NDR94_RS12555 PF00072 Response regulator receiver domain NDR94_RS12555 PF00486 Transcriptional regulatory protein, C terminal NDR94_RS12565 PF00672 HAMP domain NDR94_RS12565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS12565 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS12565 PF16750 Sensor domain of 2-component histidine kinase NDR94_RS12570 PF00881 Nitroreductase family NDR94_RS12575 PF03692 Putative zinc- or iron-chelating domain NDR94_RS12580 PF02386 Cation transport protein NDR94_RS12585 PF05661 Protein of unknown function (DUF808) NDR94_RS12590 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NDR94_RS12590 PF12833 Helix-turn-helix domain NDR94_RS12600 PF00211 Adenylate and Guanylate cyclase catalytic domain NDR94_RS12605 PF12852 Cupin NDR94_RS12605 PF12833 Helix-turn-helix domain NDR94_RS12620 PF01734 Patatin-like phospholipase NDR94_RS12630 PF16124 RecQ zinc-binding NDR94_RS12630 PF00570 HRDC domain NDR94_RS12630 PF00271 Helicase conserved C-terminal domain NDR94_RS12630 PF09382 RQC domain NDR94_RS12630 PF00270 DEAD/DEAH box helicase NDR94_RS12640 PF04304 Protein of unknown function (DUF454) NDR94_RS12660 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) NDR94_RS12670 PF00291 Pyridoxal-phosphate dependent enzyme NDR94_RS12680 PF02861 Clp amino terminal domain, pathogenicity island component NDR94_RS12680 PF17871 AAA lid domain NDR94_RS12680 PF07724 AAA domain (Cdc48 subfamily) NDR94_RS12680 PF00004 ATPase family associated with various cellular activities (AAA) NDR94_RS12680 PF10431 C-terminal, D2-small domain, of ClpB protein NDR94_RS12700 PF13230 Glutamine amidotransferases class-II NDR94_RS12710 PF00582 Universal stress protein family NDR94_RS12720 PF16326 ABC transporter C-terminal domain NDR94_RS12720 PF00005 ABC transporter NDR94_RS12720 PF12848 ABC transporter NDR94_RS12725 PF14718 Soluble lytic murein transglycosylase L domain NDR94_RS12725 PF01464 Transglycosylase SLT domain NDR94_RS12730 PF03473 MOSC domain NDR94_RS12730 PF03476 MOSC N-terminal beta barrel domain NDR94_RS12730 PF00111 2Fe-2S iron-sulfur cluster binding domain NDR94_RS12735 PF00072 Response regulator receiver domain NDR94_RS12740 PF00781 Diacylglycerol kinase catalytic domain NDR94_RS12745 PF02397 Bacterial sugar transferase NDR94_RS12750 PF01451 Low molecular weight phosphotyrosine protein phosphatase NDR94_RS12755 PF13614 AAA domain NDR94_RS12755 PF13807 G-rich domain on putative tyrosine kinase NDR94_RS12755 PF02706 Chain length determinant protein NDR94_RS12760 PF00553 Cellulose binding domain NDR94_RS12760 PF00150 Cellulase (glycosyl hydrolase family 5) NDR94_RS12790 PF03808 Glycosyl transferase WecB/TagA/CpsF family NDR94_RS12795 PF02563 Polysaccharide biosynthesis/export protein NDR94_RS12795 PF10531 SLBB domain NDR94_RS12795 PF18412 Outer-membrane lipoprotein Wza C-terminal domain NDR94_RS12800 PF00108 Thiolase, N-terminal domain NDR94_RS12800 PF02803 Thiolase, C-terminal domain NDR94_RS12805 PF03976 Polyphosphate kinase 2 (PPK2) NDR94_RS12810 PF17837 4'-phosphopantetheinyl transferase N-terminal domain NDR94_RS12810 PF01648 4'-phosphopantetheinyl transferase superfamily NDR94_RS12820 PF00216 Bacterial DNA-binding protein NDR94_RS12825 PF03880 DbpA RNA binding domain NDR94_RS12825 PF00270 DEAD/DEAH box helicase NDR94_RS12825 PF00271 Helicase conserved C-terminal domain NDR94_RS12830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS12840 PF01474 Class-II DAHP synthetase family NDR94_RS12845 PF00939 Sodium:sulfate symporter transmembrane region NDR94_RS12850 PF01132 Elongation factor P (EF-P) OB domain NDR94_RS12850 PF08207 Elongation factor P (EF-P) KOW-like domain NDR94_RS12850 PF09285 Elongation factor P, C-terminal NDR94_RS12865 PF01593 Flavin containing amine oxidoreductase NDR94_RS12870 PF01618 MotA/TolQ/ExbB proton channel family NDR94_RS12875 PF13677 Membrane MotB of proton-channel complex MotA/MotB NDR94_RS12875 PF00691 OmpA family NDR94_RS12880 PF02535 ZIP Zinc transporter NDR94_RS12890 PF12704 MacB-like periplasmic core domain NDR94_RS12890 PF02687 FtsX-like permease family NDR94_RS12895 PF00005 ABC transporter NDR94_RS12900 PF00753 Metallo-beta-lactamase superfamily NDR94_RS12905 PF00753 Metallo-beta-lactamase superfamily NDR94_RS12905 PF04273 Putative phosphatase (DUF442) NDR94_RS12910 PF00916 Sulfate permease family NDR94_RS12910 PF01740 STAS domain NDR94_RS12930 PF04143 Sulphur transport NDR94_RS12970 PF00255 Glutathione peroxidase NDR94_RS12975 PF01641 SelR domain NDR94_RS12980 PF00155 Aminotransferase class I and II NDR94_RS12990 PF01435 Peptidase family M48 NDR94_RS13000 PF05724 Thiopurine S-methyltransferase (TPMT) NDR94_RS13005 PF00158 Sigma-54 interaction domain NDR94_RS13005 PF02954 Bacterial regulatory protein, Fis family NDR94_RS13005 PF00072 Response regulator receiver domain NDR94_RS13010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS13010 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS13010 PF13188 PAS domain NDR94_RS13015 PF00158 Sigma-54 interaction domain NDR94_RS13015 PF02954 Bacterial regulatory protein, Fis family NDR94_RS13015 PF06490 Flagellar regulatory protein FleQ NDR94_RS13035 PF03918 Cytochrome C biogenesis protein NDR94_RS13040 PF08534 Redoxin NDR94_RS13045 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NDR94_RS13045 PF01578 Cytochrome C assembly protein NDR94_RS13050 PF03100 CcmE NDR94_RS13055 PF04995 Heme exporter protein D (CcmD) NDR94_RS13060 PF01578 Cytochrome C assembly protein NDR94_RS13065 PF03379 CcmB protein NDR94_RS13070 PF00005 ABC transporter NDR94_RS13080 PF01312 FlhB HrpN YscU SpaS Family NDR94_RS13095 PF01584 CheW-like domain NDR94_RS13105 PF13614 AAA domain NDR94_RS13110 PF13677 Membrane MotB of proton-channel complex MotA/MotB NDR94_RS13110 PF00691 OmpA family NDR94_RS13115 PF01618 MotA/TolQ/ExbB proton channel family NDR94_RS13120 PF01339 CheB methylesterase NDR94_RS13120 PF00072 Response regulator receiver domain NDR94_RS13125 PF01584 CheW-like domain NDR94_RS13125 PF02895 Signal transducing histidine kinase, homodimeric domain NDR94_RS13125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS13125 PF01627 Hpt domain NDR94_RS13125 PF00072 Response regulator receiver domain NDR94_RS13130 PF04344 Chemotaxis phosphatase, CheZ NDR94_RS13135 PF00072 Response regulator receiver domain NDR94_RS13140 PF04539 Sigma-70 region 3 NDR94_RS13140 PF04545 Sigma-70, region 4 NDR94_RS13140 PF04542 Sigma-70 region 2 NDR94_RS13145 PF10609 NUBPL iron-transfer P-loop NTPase NDR94_RS13150 PF00448 SRP54-type protein, GTPase domain NDR94_RS13155 PF00771 FHIPEP family NDR94_RS13160 PF00080 Copper/zinc superoxide dismutase (SODC) NDR94_RS13165 PF01312 FlhB HrpN YscU SpaS Family NDR94_RS13170 PF01311 Bacterial export proteins, family 1 NDR94_RS13175 PF01313 Bacterial export proteins, family 3 NDR94_RS13180 PF00813 FliP family NDR94_RS13185 PF04347 Flagellar biosynthesis protein, FliO NDR94_RS13190 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NDR94_RS13195 PF02154 Flagellar motor switch protein FliM NDR94_RS13195 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NDR94_RS13215 PF00072 Response regulator receiver domain NDR94_RS13215 PF00486 Transcriptional regulatory protein, C terminal NDR94_RS13220 PF13466 STAS domain NDR94_RS13230 PF18269 T3SS EscN ATPase C-terminal domain NDR94_RS13230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NDR94_RS13240 PF01706 FliG C-terminal domain NDR94_RS13240 PF14842 FliG N-terminal domain NDR94_RS13240 PF14841 FliG middle domain NDR94_RS13245 PF08345 Flagellar M-ring protein C-terminal NDR94_RS13245 PF01514 Secretory protein of YscJ/FliF family NDR94_RS13250 PF02049 Flagellar hook-basal body complex protein FliE NDR94_RS13255 PF03594 Benzoate membrane transport protein NDR94_RS13265 PF16884 N-terminal domain of oxidoreductase NDR94_RS13265 PF00107 Zinc-binding dehydrogenase NDR94_RS13270 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NDR94_RS13280 PF13188 PAS domain NDR94_RS13280 PF00563 EAL domain NDR94_RS13280 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS13280 PF03707 Bacterial signalling protein N terminal repeat NDR94_RS13290 PF00392 Bacterial regulatory proteins, gntR family NDR94_RS13290 PF00155 Aminotransferase class I and II NDR94_RS13295 PF00691 OmpA family NDR94_RS13295 PF05736 OprF membrane domain NDR94_RS13310 PF01012 Electron transfer flavoprotein domain NDR94_RS13310 PF00766 Electron transfer flavoprotein FAD-binding domain NDR94_RS13315 PF01012 Electron transfer flavoprotein domain NDR94_RS13340 PF00440 Bacterial regulatory proteins, tetR family NDR94_RS13345 PF00266 Aminotransferase class-V NDR94_RS13350 PF00324 Amino acid permease NDR94_RS13355 PF01026 TatD related DNase NDR94_RS13365 PF09115 DNA polymerase III, delta subunit, C terminal NDR94_RS13370 PF02223 Thymidylate kinase NDR94_RS13375 PF02618 YceG-like family NDR94_RS13380 PF01063 Amino-transferase class IV NDR94_RS13385 PF00109 Beta-ketoacyl synthase, N-terminal domain NDR94_RS13385 PF02801 Beta-ketoacyl synthase, C-terminal domain NDR94_RS13390 PF00550 Phosphopantetheine attachment site NDR94_RS13400 PF00698 Acyl transferase domain NDR94_RS13405 PF02504 Fatty acid synthesis protein NDR94_RS13410 PF01783 Ribosomal L32p protein family NDR94_RS13415 PF02620 Large ribosomal RNA subunit accumulation protein YceD NDR94_RS13420 PF02545 Maf-like protein NDR94_RS13425 PF01343 Peptidase family S49 NDR94_RS13425 PF06965 Na+/H+ antiporter 1 NDR94_RS13430 PF13419 Haloacid dehalogenase-like hydrolase NDR94_RS13435 PF00849 RNA pseudouridylate synthase NDR94_RS13435 PF01479 S4 domain NDR94_RS13440 PF12111 Polyribonucleotide phosphorylase C terminal NDR94_RS13440 PF10150 Ribonuclease E/G family NDR94_RS13440 PF00575 S1 RNA binding domain NDR94_RS13445 PF01565 FAD binding domain NDR94_RS13445 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NDR94_RS13450 PF01451 Low molecular weight phosphotyrosine protein phosphatase NDR94_RS13455 PF02348 Cytidylyltransferase NDR94_RS13460 PF03966 Trm112p-like protein NDR94_RS13465 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NDR94_RS13475 PF01618 MotA/TolQ/ExbB proton channel family NDR94_RS13480 PF03772 Competence protein NDR94_RS13480 PF00753 Metallo-beta-lactamase superfamily NDR94_RS13490 PF02687 FtsX-like permease family NDR94_RS13490 PF12704 MacB-like periplasmic core domain NDR94_RS13495 PF00005 ABC transporter NDR94_RS13500 PF02687 FtsX-like permease family NDR94_RS13500 PF12704 MacB-like periplasmic core domain NDR94_RS13515 PF03009 Glycerophosphoryl diester phosphodiesterase family NDR94_RS13520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NDR94_RS13520 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDR94_RS13530 PF02424 ApbE family NDR94_RS13535 PF00970 Oxidoreductase FAD-binding domain NDR94_RS13535 PF00111 2Fe-2S iron-sulfur cluster binding domain NDR94_RS13535 PF00175 Oxidoreductase NAD-binding domain NDR94_RS13540 PF02508 Rnf-Nqr subunit, membrane protein NDR94_RS13545 PF02508 Rnf-Nqr subunit, membrane protein NDR94_RS13550 PF04205 FMN-binding domain NDR94_RS13555 PF03116 NQR2, RnfD, RnfE family NDR94_RS13560 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) NDR94_RS13560 PF11973 NQRA C-terminal domain NDR94_RS13565 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NDR94_RS13565 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NDR94_RS13570 PF17757 UvrB interaction domain NDR94_RS13570 PF02559 CarD-like/TRCF domain NDR94_RS13570 PF00271 Helicase conserved C-terminal domain NDR94_RS13570 PF03461 TRCF domain NDR94_RS13570 PF00270 DEAD/DEAH box helicase NDR94_RS13580 PF00271 Helicase conserved C-terminal domain NDR94_RS13580 PF00176 SNF2 family N-terminal domain NDR94_RS13580 PF12419 SNF2 Helicase protein NDR94_RS13595 PF04679 ATP dependent DNA ligase C terminal region NDR94_RS13595 PF01068 ATP dependent DNA ligase domain NDR94_RS13595 PF04675 DNA ligase N terminus NDR94_RS13600 PF08494 DEAD/H associated NDR94_RS13600 PF00271 Helicase conserved C-terminal domain NDR94_RS13600 PF00270 DEAD/DEAH box helicase NDR94_RS13615 PF05139 Erythromycin esterase NDR94_RS13615 PF00156 Phosphoribosyl transferase domain NDR94_RS13630 PF03819 MazG nucleotide pyrophosphohydrolase domain NDR94_RS13635 PF02824 TGS domain NDR94_RS13635 PF04607 Region found in RelA / SpoT proteins NDR94_RS13635 PF13291 ACT domain NDR94_RS13640 PF05958 tRNA (Uracil-5-)-methyltransferase NDR94_RS13645 PF00291 Pyridoxal-phosphate dependent enzyme NDR94_RS13650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS13650 PF03466 LysR substrate binding domain NDR94_RS13655 PF03458 UPF0126 domain NDR94_RS13660 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NDR94_RS13660 PF00072 Response regulator receiver domain NDR94_RS13660 PF01627 Hpt domain NDR94_RS13660 PF00672 HAMP domain NDR94_RS13660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS13660 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS13665 PF01266 FAD dependent oxidoreductase NDR94_RS13665 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NDR94_RS13675 PF01925 Sulfite exporter TauE/SafE NDR94_RS13685 PF03466 LysR substrate binding domain NDR94_RS13685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS13700 PF00271 Helicase conserved C-terminal domain NDR94_RS13700 PF00270 DEAD/DEAH box helicase NDR94_RS13720 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NDR94_RS13735 PF07396 Phosphate-selective porin O and P NDR94_RS13740 PF00899 ThiF family NDR94_RS13745 PF07687 Peptidase dimerisation domain NDR94_RS13745 PF01546 Peptidase family M20/M25/M40 NDR94_RS13750 PF13847 Methyltransferase domain NDR94_RS13760 PF00313 'Cold-shock' DNA-binding domain NDR94_RS13775 PF00005 ABC transporter NDR94_RS13785 PF13302 Acetyltransferase (GNAT) domain NDR94_RS13790 PF00905 Penicillin binding protein transpeptidase domain NDR94_RS13810 PF01553 Acyltransferase NDR94_RS13815 PF00583 Acetyltransferase (GNAT) family NDR94_RS13825 PF13098 Thioredoxin-like domain NDR94_RS13830 PF00578 AhpC/TSA family NDR94_RS13835 PF11412 Disulphide bond corrector protein DsbC NDR94_RS13835 PF02683 Cytochrome C biogenesis protein transmembrane region NDR94_RS13840 PF00072 Response regulator receiver domain NDR94_RS13840 PF00486 Transcriptional regulatory protein, C terminal NDR94_RS13845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS13845 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS13850 PF00672 HAMP domain NDR94_RS13850 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS13850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS13855 PF00072 Response regulator receiver domain NDR94_RS13855 PF00486 Transcriptional regulatory protein, C terminal NDR94_RS13860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NDR94_RS13860 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDR94_RS13860 PF00403 Heavy-metal-associated domain NDR94_RS13880 PF05275 Copper resistance protein B precursor (CopB) NDR94_RS13895 PF00583 Acetyltransferase (GNAT) family NDR94_RS13900 PF03358 NADPH-dependent FMN reductase NDR94_RS13905 PF17954 Quercetinase C-terminal cupin domain NDR94_RS13905 PF02678 Pirin NDR94_RS13910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NDR94_RS13915 PF00535 Glycosyl transferase family 2 NDR94_RS13920 PF04349 Periplasmic glucan biosynthesis protein, MdoG NDR94_RS13925 PF00933 Glycosyl hydrolase family 3 N terminal domain NDR94_RS13925 PF01915 Glycosyl hydrolase family 3 C-terminal domain NDR94_RS13925 PF14310 Fibronectin type III-like domain NDR94_RS13930 PF02567 Phenazine biosynthesis-like protein NDR94_RS13935 PF04172 LrgB-like family NDR94_RS13940 PF03788 LrgA family NDR94_RS13945 PF13746 4Fe-4S dicluster domain NDR94_RS13945 PF12801 4Fe-4S binding domain NDR94_RS13945 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase NDR94_RS13950 PF00392 Bacterial regulatory proteins, gntR family NDR94_RS13950 PF00155 Aminotransferase class I and II NDR94_RS13955 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS13955 PF03707 Bacterial signalling protein N terminal repeat NDR94_RS13955 PF00563 EAL domain NDR94_RS13970 PF00440 Bacterial regulatory proteins, tetR family NDR94_RS13975 PF00873 AcrB/AcrD/AcrF family NDR94_RS13980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NDR94_RS13985 PF08361 MAATS-type transcriptional repressor, C-terminal region NDR94_RS13985 PF00440 Bacterial regulatory proteins, tetR family NDR94_RS13990 PF04445 Putative SAM-dependent methyltransferase NDR94_RS14010 PF00814 Glycoprotease family NDR94_RS14015 PF05191 Adenylate kinase, active site lid NDR94_RS14020 PF00311 Phosphoenolpyruvate carboxylase NDR94_RS14035 PF05736 OprF membrane domain NDR94_RS14035 PF00691 OmpA family NDR94_RS14060 PF00152 tRNA synthetases class II (D, K and N) NDR94_RS14060 PF01336 OB-fold nucleic acid binding domain NDR94_RS14075 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NDR94_RS14080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NDR94_RS14080 PF01568 Molydopterin dinucleotide binding domain NDR94_RS14080 PF00384 Molybdopterin oxidoreductase NDR94_RS14085 PF02272 DHHA1 domain NDR94_RS14085 PF01368 DHH family NDR94_RS14085 PF17768 RecJ OB domain NDR94_RS14095 PF03746 LamB/YcsF family NDR94_RS14100 PF02682 Carboxyltransferase domain, subdomain C and D NDR94_RS14105 PF02626 Carboxyltransferase domain, subdomain A and B NDR94_RS14110 PF07286 Protein of unknown function (DUF1445) NDR94_RS14115 PF01566 Natural resistance-associated macrophage protein NDR94_RS14120 PF07152 YaeQ protein NDR94_RS14125 PF00072 Response regulator receiver domain NDR94_RS14125 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS14130 PF04324 BFD-like [2Fe-2S] binding domain NDR94_RS14135 PF00210 Ferritin-like domain NDR94_RS14140 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NDR94_RS14140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NDR94_RS14155 PF04381 Putative exonuclease, RdgC NDR94_RS14160 PF07690 Major Facilitator Superfamily NDR94_RS14180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS14180 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS14185 PF13194 Domain of unknown function (DUF4010) NDR94_RS14190 PF02646 RmuC family NDR94_RS14205 PF13617 YnbE-like lipoprotein NDR94_RS14220 PF00136 DNA polymerase family B NDR94_RS14220 PF03104 DNA polymerase family B, exonuclease domain NDR94_RS14230 PF01259 SAICAR synthetase NDR94_RS14240 PF00701 Dihydrodipicolinate synthetase family NDR94_RS14250 PF00578 AhpC/TSA family NDR94_RS14255 PF01594 AI-2E family transporter NDR94_RS14260 PF01206 Sulfurtransferase TusA NDR94_RS14265 PF01435 Peptidase family M48 NDR94_RS14270 PF02445 Quinolinate synthetase A protein NDR94_RS14275 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NDR94_RS14275 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NDR94_RS14285 PF06508 Queuosine biosynthesis protein QueC NDR94_RS14290 PF04055 Radical SAM superfamily NDR94_RS14295 PF16331 TolA binding protein trimerisation NDR94_RS14295 PF13525 Outer membrane lipoprotein NDR94_RS14300 PF00691 OmpA family NDR94_RS14305 PF07676 WD40-like Beta Propeller Repeat NDR94_RS14305 PF04052 TolB amino-terminal domain NDR94_RS14315 PF02472 Biopolymer transport protein ExbD/TolR NDR94_RS14320 PF01618 MotA/TolQ/ExbB proton channel family NDR94_RS14325 PF03061 Thioesterase superfamily NDR94_RS14330 PF05496 Holliday junction DNA helicase RuvB P-loop domain NDR94_RS14330 PF05491 RuvB C-terminal winged helix domain NDR94_RS14330 PF17864 RuvB AAA lid domain NDR94_RS14335 PF01330 RuvA N terminal domain NDR94_RS14335 PF07499 RuvA, C-terminal domain NDR94_RS14340 PF02075 Crossover junction endodeoxyribonuclease RuvC NDR94_RS14345 PF01709 Transcriptional regulator NDR94_RS14350 PF00152 tRNA synthetases class II (D, K and N) NDR94_RS14350 PF01336 OB-fold nucleic acid binding domain NDR94_RS14350 PF02938 GAD domain NDR94_RS14355 PF00210 Ferritin-like domain NDR94_RS14360 PF00313 'Cold-shock' DNA-binding domain NDR94_RS14365 PF04102 SlyX NDR94_RS14375 PF03573 outer membrane porin, OprD family NDR94_RS14380 PF03129 Anticodon binding domain NDR94_RS14380 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NDR94_RS14380 PF04073 Aminoacyl-tRNA editing domain NDR94_RS14395 PF00578 AhpC/TSA family NDR94_RS14410 PF03631 Virulence factor BrkB NDR94_RS14415 PF03960 ArsC family NDR94_RS14420 PF03358 NADPH-dependent FMN reductase NDR94_RS14430 PF00308 Bacterial dnaA protein NDR94_RS14435 PF01594 AI-2E family transporter NDR94_RS14445 PF02769 AIR synthase related protein, C-terminal domain NDR94_RS14445 PF00586 AIR synthase related protein, N-terminal domain NDR94_RS14450 PF00551 Formyl transferase NDR94_RS14465 PF00155 Aminotransferase class I and II NDR94_RS14485 PF03960 ArsC family NDR94_RS14490 PF14602 Hexapeptide repeat of succinyl-transferase NDR94_RS14490 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle NDR94_RS14495 PF00266 Aminotransferase class-V NDR94_RS14500 PF02657 Fe-S metabolism associated domain NDR94_RS14505 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NDR94_RS14505 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NDR94_RS14510 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NDR94_RS14515 PF00034 Cytochrome c NDR94_RS14525 PF12843 Putative quorum-sensing-regulated virulence factor NDR94_RS14530 PF12796 Ankyrin repeats (3 copies) NDR94_RS14530 PF00023 Ankyrin repeat NDR94_RS14535 PF04073 Aminoacyl-tRNA editing domain NDR94_RS14540 PF01266 FAD dependent oxidoreductase NDR94_RS14540 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NDR94_RS14545 PF08267 Cobalamin-independent synthase, N-terminal domain NDR94_RS14545 PF01717 Cobalamin-independent synthase, Catalytic domain NDR94_RS14555 PF03466 LysR substrate binding domain NDR94_RS14555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS14560 PF00106 short chain dehydrogenase NDR94_RS14570 PF01810 LysE type translocator NDR94_RS14590 PF03783 Curli production assembly/transport component CsgG NDR94_RS14610 PF08362 YcdC-like protein, C-terminal region NDR94_RS14610 PF00440 Bacterial regulatory proteins, tetR family NDR94_RS14615 PF03466 LysR substrate binding domain NDR94_RS14615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS14620 PF18030 RimK PreATP-grasp domain NDR94_RS14620 PF08443 RimK-like ATP-grasp domain NDR94_RS14625 PF01170 Putative RNA methylase family UPF0020 NDR94_RS14625 PF10672 S-adenosylmethionine-dependent methyltransferase NDR94_RS14625 PF02926 THUMP domain NDR94_RS14630 PF10996 Beta-Casp domain NDR94_RS14630 PF00753 Metallo-beta-lactamase superfamily NDR94_RS14630 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NDR94_RS14645 PF00698 Acyl transferase domain NDR94_RS14645 PF16197 Ketoacyl-synthetase C-terminal extension NDR94_RS14645 PF08240 Alcohol dehydrogenase GroES-like domain NDR94_RS14645 PF00109 Beta-ketoacyl synthase, N-terminal domain NDR94_RS14645 PF02801 Beta-ketoacyl synthase, C-terminal domain NDR94_RS14645 PF08659 KR domain NDR94_RS14645 PF00550 Phosphopantetheine attachment site NDR94_RS14645 PF14765 Polyketide synthase dehydratase NDR94_RS14655 PF02954 Bacterial regulatory protein, Fis family NDR94_RS14655 PF01590 GAF domain NDR94_RS14655 PF00158 Sigma-54 interaction domain NDR94_RS14660 PF00916 Sulfate permease family NDR94_RS14660 PF01740 STAS domain NDR94_RS14670 PF00550 Phosphopantetheine attachment site NDR94_RS14695 PF04321 RmlD substrate binding domain NDR94_RS14700 PF01810 LysE type translocator NDR94_RS14705 PF13188 PAS domain NDR94_RS14705 PF08448 PAS fold NDR94_RS14705 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS14705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS14705 PF00072 Response regulator receiver domain NDR94_RS14720 PF06745 KaiC NDR94_RS14725 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS14725 PF08448 PAS fold NDR94_RS14725 PF13188 PAS domain NDR94_RS14725 PF00072 Response regulator receiver domain NDR94_RS14725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS14730 PF13619 KTSC domain NDR94_RS14735 PF00005 ABC transporter NDR94_RS14735 PF00664 ABC transporter transmembrane region NDR94_RS14745 PF03275 UDP-galactopyranose mutase NDR94_RS14755 PF16363 GDP-mannose 4,6 dehydratase NDR94_RS14765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS14765 PF03466 LysR substrate binding domain NDR94_RS14770 PF00291 Pyridoxal-phosphate dependent enzyme NDR94_RS14775 PF00290 Tryptophan synthase alpha chain NDR94_RS14790 PF09084 NMT1/THI5 like NDR94_RS14795 PF00005 ABC transporter NDR94_RS14800 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS14810 PF00106 short chain dehydrogenase NDR94_RS14820 PF06719 AraC-type transcriptional regulator N-terminus NDR94_RS14820 PF12833 Helix-turn-helix domain NDR94_RS14825 PF00005 ABC transporter NDR94_RS14830 PF02653 Branched-chain amino acid transport system / permease component NDR94_RS14835 PF02653 Branched-chain amino acid transport system / permease component NDR94_RS14850 PF00375 Sodium:dicarboxylate symporter family NDR94_RS14860 PF01131 DNA topoisomerase NDR94_RS14860 PF01751 Toprim domain NDR94_RS14875 PF03600 Citrate transporter NDR94_RS14875 PF02080 TrkA-C domain NDR94_RS14880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS14880 PF00672 HAMP domain NDR94_RS14885 PF07690 Major Facilitator Superfamily NDR94_RS14895 PF09828 Chromate resistance exported protein NDR94_RS14905 PF00561 alpha/beta hydrolase fold NDR94_RS14910 PF00672 HAMP domain NDR94_RS14910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS14910 PF12729 Four helix bundle sensory module for signal transduction NDR94_RS14925 PF12833 Helix-turn-helix domain NDR94_RS14930 PF01810 LysE type translocator NDR94_RS14945 PF00672 HAMP domain NDR94_RS14945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS14955 PF04286 Protein of unknown function (DUF445) NDR94_RS14960 PF00005 ABC transporter NDR94_RS14975 PF01230 HIT domain NDR94_RS14980 PF01546 Peptidase family M20/M25/M40 NDR94_RS14980 PF07687 Peptidase dimerisation domain NDR94_RS14985 PF03475 3-alpha domain NDR94_RS14985 PF03473 MOSC domain NDR94_RS15000 PF03795 YCII-related domain NDR94_RS15015 PF03600 Citrate transporter NDR94_RS15025 PF00753 Metallo-beta-lactamase superfamily NDR94_RS15030 PF01738 Dienelactone hydrolase family NDR94_RS15035 PF12697 Alpha/beta hydrolase family NDR94_RS15040 PF07883 Cupin domain NDR94_RS15040 PF05899 Protein of unknown function (DUF861) NDR94_RS15045 PF01728 FtsJ-like methyltransferase NDR94_RS15055 PF08032 RNA 2'-O ribose methyltransferase substrate binding NDR94_RS15055 PF00588 SpoU rRNA Methylase family NDR94_RS15065 PF00069 Protein kinase domain NDR94_RS15065 PF03793 PASTA domain NDR94_RS15070 PF16697 Inner membrane component of T3SS, cytoplasmic domain NDR94_RS15080 PF00271 Helicase conserved C-terminal domain NDR94_RS15080 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NDR94_RS15080 PF04408 Helicase associated domain (HA2) NDR94_RS15080 PF11898 Domain of unknown function (DUF3418) NDR94_RS15080 PF00270 DEAD/DEAH box helicase NDR94_RS15085 PF02225 PA domain NDR94_RS15085 PF04389 Peptidase family M28 NDR94_RS15090 PF00672 HAMP domain NDR94_RS15090 PF17200 Single Cache domain 2 NDR94_RS15090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS15095 PF00672 HAMP domain NDR94_RS15095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS15095 PF17200 Single Cache domain 2 NDR94_RS15100 PF00501 AMP-binding enzyme NDR94_RS15100 PF13193 AMP-binding enzyme C-terminal domain NDR94_RS15105 PF13193 AMP-binding enzyme C-terminal domain NDR94_RS15105 PF00501 AMP-binding enzyme NDR94_RS15110 PF01575 MaoC like domain NDR94_RS15115 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NDR94_RS15115 PF11852 Domain of unknown function (DUF3372) NDR94_RS15115 PF03714 Bacterial pullanase-associated domain NDR94_RS15115 PF18494 Pullulanase Ins domain NDR94_RS15115 PF17967 Pullulanase N2 domain NDR94_RS15135 PF00271 Helicase conserved C-terminal domain NDR94_RS15135 PF12137 RNA polymerase recycling family C-terminal NDR94_RS15135 PF00176 SNF2 family N-terminal domain NDR94_RS15135 PF18339 RapA N-terminal Tudor like domain 1 NDR94_RS15135 PF18337 RapA N-terminal Tudor like domain NDR94_RS15145 PF00012 Hsp70 protein NDR94_RS15150 PF07690 Major Facilitator Superfamily NDR94_RS15155 PF01261 Xylose isomerase-like TIM barrel NDR94_RS15160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NDR94_RS15160 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NDR94_RS15165 PF02673 Bacitracin resistance protein BacA NDR94_RS15180 PF00005 ABC transporter NDR94_RS15185 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS15190 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS15200 PF13458 Periplasmic binding protein NDR94_RS15205 PF02653 Branched-chain amino acid transport system / permease component NDR94_RS15210 PF02653 Branched-chain amino acid transport system / permease component NDR94_RS15210 PF11862 Domain of unknown function (DUF3382) NDR94_RS15215 PF12399 Branched-chain amino acid ATP-binding cassette transporter NDR94_RS15215 PF00005 ABC transporter NDR94_RS15220 PF00005 ABC transporter NDR94_RS15240 PF00817 impB/mucB/samB family NDR94_RS15240 PF11798 IMS family HHH motif NDR94_RS15275 PF00749 tRNA synthetases class I (E and Q), catalytic domain NDR94_RS15280 PF00271 Helicase conserved C-terminal domain NDR94_RS15280 PF12344 Ultra-violet resistance protein B NDR94_RS15280 PF02151 UvrB/uvrC motif NDR94_RS15280 PF04851 Type III restriction enzyme, res subunit NDR94_RS15280 PF17757 UvrB interaction domain NDR94_RS15285 PF00155 Aminotransferase class I and II NDR94_RS15300 PF13542 Helix-turn-helix domain of transposase family ISL3 NDR94_RS15300 PF01610 Transposase NDR94_RS15300 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NDR94_RS15305 PF00462 Glutaredoxin NDR94_RS15310 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NDR94_RS15310 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NDR94_RS15315 PF00005 ABC transporter NDR94_RS15315 PF08402 TOBE domain NDR94_RS15320 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NDR94_RS15325 PF07731 Multicopper oxidase NDR94_RS15325 PF07732 Multicopper oxidase NDR94_RS15325 PF00394 Multicopper oxidase NDR94_RS15330 PF00958 GMP synthase C terminal domain NDR94_RS15330 PF02540 NAD synthase NDR94_RS15330 PF00117 Glutamine amidotransferase class-I NDR94_RS15335 PF00571 CBS domain NDR94_RS15335 PF00478 IMP dehydrogenase / GMP reductase domain NDR94_RS15345 PF02601 Exonuclease VII, large subunit NDR94_RS15345 PF13742 OB-fold nucleic acid binding domain NDR94_RS15350 PF01551 Peptidase family M23 NDR94_RS15350 PF01476 LysM domain NDR94_RS15350 PF08525 Opacity-associated protein A N-terminal motif NDR94_RS15360 PF00924 Mechanosensitive ion channel NDR94_RS15375 PF00682 HMGL-like NDR94_RS15375 PF08502 LeuA allosteric (dimerisation) domain NDR94_RS15385 PF00107 Zinc-binding dehydrogenase NDR94_RS15385 PF08240 Alcohol dehydrogenase GroES-like domain NDR94_RS15390 PF00892 EamA-like transporter family NDR94_RS15395 PF04231 Endonuclease I NDR94_RS15400 PF09997 Predicted membrane protein (DUF2238) NDR94_RS15415 PF13520 Amino acid permease NDR94_RS15420 PF00795 Carbon-nitrogen hydrolase NDR94_RS15425 PF00155 Aminotransferase class I and II NDR94_RS15430 PF00132 Bacterial transferase hexapeptide (six repeats) NDR94_RS15430 PF06426 Serine acetyltransferase, N-terminal NDR94_RS15435 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NDR94_RS15435 PF01926 50S ribosome-binding GTPase NDR94_RS15440 PF13360 PQQ-like domain NDR94_RS15445 PF09976 Tetratricopeptide repeat-like domain NDR94_RS15450 PF13393 Histidyl-tRNA synthetase NDR94_RS15450 PF03129 Anticodon binding domain NDR94_RS15455 PF04551 GcpE protein NDR94_RS15470 PF04055 Radical SAM superfamily NDR94_RS15475 PF00334 Nucleoside diphosphate kinase NDR94_RS15480 PF04384 Iron-sulphur cluster assembly NDR94_RS15485 PF00111 2Fe-2S iron-sulfur cluster binding domain NDR94_RS15490 PF00012 Hsp70 protein NDR94_RS15495 PF07743 HSCB C-terminal oligomerisation domain NDR94_RS15495 PF00226 DnaJ domain NDR94_RS15500 PF01521 Iron-sulphur cluster biosynthesis NDR94_RS15505 PF01592 NifU-like N terminal domain NDR94_RS15510 PF00266 Aminotransferase class-V NDR94_RS15515 PF02082 Transcriptional regulator NDR94_RS15520 PF00132 Bacterial transferase hexapeptide (six repeats) NDR94_RS15525 PF00588 SpoU rRNA Methylase family NDR94_RS15530 PF00459 Inositol monophosphatase family NDR94_RS15535 PF05433 Glycine zipper 2TM domain NDR94_RS15540 PF07549 SecD/SecF GG Motif NDR94_RS15540 PF02355 Protein export membrane protein NDR94_RS15545 PF13721 SecD export protein N-terminal TM region NDR94_RS15545 PF07549 SecD/SecF GG Motif NDR94_RS15545 PF02355 Protein export membrane protein NDR94_RS15550 PF02699 Preprotein translocase subunit NDR94_RS15555 PF01702 Queuine tRNA-ribosyltransferase NDR94_RS15560 PF02547 Queuosine biosynthesis protein NDR94_RS15570 PF00313 'Cold-shock' DNA-binding domain NDR94_RS15580 PF03739 Lipopolysaccharide export system permease LptF/LptG NDR94_RS15585 PF03739 Lipopolysaccharide export system permease LptF/LptG NDR94_RS15590 PF02789 Cytosol aminopeptidase family, N-terminal domain NDR94_RS15590 PF00883 Cytosol aminopeptidase family, catalytic domain NDR94_RS15595 PF04364 DNA polymerase III chi subunit, HolC NDR94_RS15605 PF08264 Anticodon-binding domain of tRNA NDR94_RS15605 PF00133 tRNA synthetases class I (I, L, M and V) NDR94_RS15605 PF10458 Valyl tRNA synthetase tRNA binding arm NDR94_RS15610 PF03600 Citrate transporter NDR94_RS15620 PF03600 Citrate transporter NDR94_RS15620 PF02080 TrkA-C domain NDR94_RS15625 PF06779 Uncharacterised MFS-type transporter YbfB NDR94_RS15630 PF05971 RNA methyltransferase NDR94_RS15645 PF07690 Major Facilitator Superfamily NDR94_RS15655 PF04245 37-kD nucleoid-associated bacterial protein NDR94_RS15660 PF03976 Polyphosphate kinase 2 (PPK2) NDR94_RS15675 PF01541 GIY-YIG catalytic domain NDR94_RS15680 PF01464 Transglycosylase SLT domain NDR94_RS15680 PF00497 Bacterial extracellular solute-binding proteins, family 3 NDR94_RS15685 PF00690 Cation transporter/ATPase, N-terminus NDR94_RS15685 PF00689 Cation transporting ATPase, C-terminus NDR94_RS15695 PF01979 Amidohydrolase family NDR94_RS15700 PF02608 ABC transporter substrate-binding protein PnrA-like NDR94_RS15705 PF03171 2OG-Fe(II) oxygenase superfamily NDR94_RS15705 PF14226 non-haem dioxygenase in morphine synthesis N-terminal NDR94_RS15710 PF00111 2Fe-2S iron-sulfur cluster binding domain NDR94_RS15710 PF01799 [2Fe-2S] binding domain NDR94_RS15715 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NDR94_RS15715 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NDR94_RS15725 PF01979 Amidohydrolase family NDR94_RS15730 PF01297 Zinc-uptake complex component A periplasmic NDR94_RS15735 PF00950 ABC 3 transport family NDR94_RS15745 PF07729 FCD domain NDR94_RS15745 PF00392 Bacterial regulatory proteins, gntR family NDR94_RS15750 PF00860 Permease family NDR94_RS15760 PF00576 HIUase/Transthyretin family NDR94_RS15765 PF01522 Polysaccharide deacetylase NDR94_RS15770 PF01014 Uricase NDR94_RS15770 PF09349 OHCU decarboxylase NDR94_RS15775 PF03561 Allantoicase repeat NDR94_RS15780 PF04115 Ureidoglycolate lyase NDR94_RS15790 PF00689 Cation transporting ATPase, C-terminus NDR94_RS15790 PF00690 Cation transporter/ATPase, N-terminus NDR94_RS15800 PF02743 Cache domain NDR94_RS15800 PF00672 HAMP domain NDR94_RS15800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS15805 PF08362 YcdC-like protein, C-terminal region NDR94_RS15805 PF00440 Bacterial regulatory proteins, tetR family NDR94_RS15815 PF13533 Biotin-lipoyl like NDR94_RS15830 PF02321 Outer membrane efflux protein NDR94_RS15840 PF03707 Bacterial signalling protein N terminal repeat NDR94_RS15840 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS15840 PF13188 PAS domain NDR94_RS15840 PF00563 EAL domain NDR94_RS15845 PF03372 Endonuclease/Exonuclease/phosphatase family NDR94_RS15850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS15850 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS15850 PF00672 HAMP domain NDR94_RS15855 PF00072 Response regulator receiver domain NDR94_RS15855 PF00486 Transcriptional regulatory protein, C terminal NDR94_RS15865 PF00576 HIUase/Transthyretin family NDR94_RS15870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS15870 PF03466 LysR substrate binding domain NDR94_RS15875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NDR94_RS15875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NDR94_RS15875 PF00205 Thiamine pyrophosphate enzyme, central domain NDR94_RS15880 PF01261 Xylose isomerase-like TIM barrel NDR94_RS15885 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NDR94_RS15885 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NDR94_RS15890 PF13660 Domain of unknown function (DUF4147) NDR94_RS15890 PF05161 MOFRL family NDR94_RS15895 PF02887 Pyruvate kinase, alpha/beta domain NDR94_RS15895 PF00224 Pyruvate kinase, barrel domain NDR94_RS15900 PF03253 Urea transporter NDR94_RS15910 PF00970 Oxidoreductase FAD-binding domain NDR94_RS15910 PF00042 Globin NDR94_RS15910 PF00175 Oxidoreductase NAD-binding domain NDR94_RS15925 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NDR94_RS15925 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NDR94_RS15930 PF05230 MASE2 domain NDR94_RS15930 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS15935 PF03797 Autotransporter beta-domain NDR94_RS15935 PF00657 GDSL-like Lipase/Acylhydrolase NDR94_RS15950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS15950 PF03466 LysR substrate binding domain NDR94_RS15955 PF01810 LysE type translocator NDR94_RS15960 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NDR94_RS15960 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NDR94_RS15965 PF03707 Bacterial signalling protein N terminal repeat NDR94_RS15965 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS15965 PF00563 EAL domain NDR94_RS15980 PF04011 LemA family NDR94_RS16005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS16005 PF00672 HAMP domain NDR94_RS16010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NDR94_RS16015 PF00873 AcrB/AcrD/AcrF family NDR94_RS16025 PF00118 TCP-1/cpn60 chaperonin family NDR94_RS16030 PF00166 Chaperonin 10 Kd subunit NDR94_RS16035 PF04186 FxsA cytoplasmic membrane protein NDR94_RS16060 PF07690 Major Facilitator Superfamily NDR94_RS16065 PF05552 Conserved TM helix NDR94_RS16065 PF00924 Mechanosensitive ion channel NDR94_RS16070 PF04461 Protein of unknown function (DUF520) NDR94_RS16075 PF00072 Response regulator receiver domain NDR94_RS16080 PF08546 Ketopantoate reductase PanE/ApbA C terminal NDR94_RS16080 PF02558 Ketopantoate reductase PanE/ApbA NDR94_RS16085 PF08448 PAS fold NDR94_RS16085 PF08447 PAS fold NDR94_RS16085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS16090 PF01923 Cobalamin adenosyltransferase NDR94_RS16110 PF13192 Thioredoxin domain NDR94_RS16110 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDR94_RS16115 PF10417 C-terminal domain of 1-Cys peroxiredoxin NDR94_RS16115 PF00578 AhpC/TSA family NDR94_RS16120 PF00293 NUDIX domain NDR94_RS16130 PF01960 ArgJ family NDR94_RS16135 PF01043 SecA preprotein cross-linking domain NDR94_RS16135 PF02810 SEC-C motif NDR94_RS16135 PF07516 SecA Wing and Scaffold domain NDR94_RS16135 PF07517 SecA DEAD-like domain NDR94_RS16160 PF00196 Bacterial regulatory proteins, luxR family NDR94_RS16165 PF07044 Protein of unknown function (DUF1329) NDR94_RS16175 PF00156 Phosphoribosyl transferase domain NDR94_RS16185 PF00860 Permease family NDR94_RS16195 PF09411 Lipid A 3-O-deacylase (PagL) NDR94_RS16200 PF01177 Asp/Glu/Hydantoin racemase NDR94_RS16205 PF00899 ThiF family NDR94_RS16210 PF17827 PrmC N-terminal domain NDR94_RS16210 PF05175 Methyltransferase small domain NDR94_RS16215 PF00472 RF-1 domain NDR94_RS16215 PF03462 PCRF domain NDR94_RS16220 PF01488 Shikimate / quinate 5-dehydrogenase NDR94_RS16220 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NDR94_RS16220 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NDR94_RS16230 PF03550 Outer membrane lipoprotein LolB NDR94_RS16235 PF00288 GHMP kinases N terminal domain NDR94_RS16235 PF08544 GHMP kinases C terminal NDR94_RS16250 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NDR94_RS16250 PF14572 Phosphoribosyl synthetase-associated domain NDR94_RS16255 PF14693 Ribosomal protein TL5, C-terminal domain NDR94_RS16255 PF01386 Ribosomal L25p family NDR94_RS16260 PF01195 Peptidyl-tRNA hydrolase NDR94_RS16265 PF01926 50S ribosome-binding GTPase NDR94_RS16265 PF06071 Protein of unknown function (DUF933) NDR94_RS16270 PF13356 Arm DNA-binding domain NDR94_RS16270 PF00589 Phage integrase family NDR94_RS16290 PF02463 RecF/RecN/SMC N terminal domain NDR94_RS16320 PF13005 zinc-finger binding domain of transposase IS66 NDR94_RS16320 PF03050 Transposase IS66 family NDR94_RS16320 PF13007 Transposase C of IS166 homeodomain NDR94_RS16320 PF13817 IS66 C-terminal element NDR94_RS16340 PF02653 Branched-chain amino acid transport system / permease component NDR94_RS16350 PF00005 ABC transporter NDR94_RS16355 PF12399 Branched-chain amino acid ATP-binding cassette transporter NDR94_RS16355 PF00005 ABC transporter NDR94_RS16360 PF03573 outer membrane porin, OprD family NDR94_RS16370 PF00501 AMP-binding enzyme NDR94_RS16370 PF13193 AMP-binding enzyme C-terminal domain NDR94_RS16375 PF03851 UV-endonuclease UvdE NDR94_RS16380 PF02770 Acyl-CoA dehydrogenase, middle domain NDR94_RS16380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NDR94_RS16380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NDR94_RS16385 PF01039 Carboxyl transferase domain NDR94_RS16390 PF00378 Enoyl-CoA hydratase/isomerase NDR94_RS16395 PF00364 Biotin-requiring enzyme NDR94_RS16395 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NDR94_RS16395 PF02785 Biotin carboxylase C-terminal domain NDR94_RS16395 PF00289 Biotin carboxylase, N-terminal domain NDR94_RS16400 PF00682 HMGL-like NDR94_RS16405 PF01144 Coenzyme A transferase NDR94_RS16410 PF01144 Coenzyme A transferase NDR94_RS16415 PF02803 Thiolase, C-terminal domain NDR94_RS16415 PF00108 Thiolase, N-terminal domain NDR94_RS16420 PF13411 MerR HTH family regulatory protein NDR94_RS16425 PF03480 Bacterial extracellular solute-binding protein, family 7 NDR94_RS16435 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NDR94_RS16440 PF02954 Bacterial regulatory protein, Fis family NDR94_RS16440 PF00158 Sigma-54 interaction domain NDR94_RS16440 PF13185 GAF domain NDR94_RS16455 PF03573 outer membrane porin, OprD family NDR94_RS16470 PF13007 Transposase C of IS166 homeodomain NDR94_RS16470 PF03050 Transposase IS66 family NDR94_RS16470 PF13817 IS66 C-terminal element NDR94_RS16470 PF13005 zinc-finger binding domain of transposase IS66 NDR94_RS16475 PF05717 IS66 Orf2 like protein NDR94_RS16505 PF00892 EamA-like transporter family NDR94_RS16510 PF00484 Carbonic anhydrase NDR94_RS16515 PF00982 Glycosyltransferase family 20 NDR94_RS16520 PF02358 Trehalose-phosphatase NDR94_RS16530 PF00583 Acetyltransferase (GNAT) family NDR94_RS16540 PF00682 HMGL-like NDR94_RS16540 PF08502 LeuA allosteric (dimerisation) domain NDR94_RS16545 PF03435 Saccharopine dehydrogenase NADP binding domain NDR94_RS16545 PF16653 Saccharopine dehydrogenase C-terminal domain NDR94_RS16550 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NDR94_RS16570 PF02470 MlaD protein NDR94_RS16575 PF04403 Paraquat-inducible protein A NDR94_RS16580 PF04403 Paraquat-inducible protein A NDR94_RS16610 PF01794 Ferric reductase like transmembrane component NDR94_RS16615 PF00174 Oxidoreductase molybdopterin binding domain NDR94_RS16620 PF01066 CDP-alcohol phosphatidyltransferase NDR94_RS16625 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NDR94_RS16625 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NDR94_RS16630 PF10369 Small subunit of acetolactate synthase NDR94_RS16635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NDR94_RS16635 PF00205 Thiamine pyrophosphate enzyme, central domain NDR94_RS16635 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NDR94_RS16645 PF04287 tRNA pseudouridine synthase C NDR94_RS16645 PF00849 RNA pseudouridylate synthase NDR94_RS16655 PF00912 Transglycosylase NDR94_RS16655 PF14814 Bifunctional transglycosylase second domain NDR94_RS16655 PF00905 Penicillin binding protein transpeptidase domain NDR94_RS16685 PF00005 ABC transporter NDR94_RS16690 PF01032 FecCD transport family NDR94_RS16700 PF02683 Cytochrome C biogenesis protein transmembrane region NDR94_RS16700 PF11412 Disulphide bond corrector protein DsbC NDR94_RS16705 PF01220 Dehydroquinase class II NDR94_RS16710 PF00364 Biotin-requiring enzyme NDR94_RS16715 PF00289 Biotin carboxylase, N-terminal domain NDR94_RS16715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NDR94_RS16715 PF02785 Biotin carboxylase C-terminal domain NDR94_RS16730 PF01207 Dihydrouridine synthase (Dus) NDR94_RS16735 PF02954 Bacterial regulatory protein, Fis family NDR94_RS16740 PF01808 AICARFT/IMPCHase bienzyme NDR94_RS16740 PF02142 MGS-like domain NDR94_RS16745 PF02844 Phosphoribosylglycinamide synthetase, N domain NDR94_RS16745 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NDR94_RS16745 PF02843 Phosphoribosylglycinamide synthetase, C domain NDR94_RS16750 PF00672 HAMP domain NDR94_RS16750 PF01627 Hpt domain NDR94_RS16750 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS16750 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NDR94_RS16750 PF00072 Response regulator receiver domain NDR94_RS16750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS16755 PF00067 Cytochrome P450 NDR94_RS16770 PF03547 Membrane transport protein NDR94_RS16775 PF04321 RmlD substrate binding domain NDR94_RS16780 PF03749 Sugar fermentation stimulation protein RE domain NDR94_RS16780 PF17746 SfsA N-terminal OB domain NDR94_RS16785 PF00155 Aminotransferase class I and II NDR94_RS16790 PF01258 Prokaryotic dksA/traR C4-type zinc finger NDR94_RS16795 PF00749 tRNA synthetases class I (E and Q), catalytic domain NDR94_RS16805 PF08447 PAS fold NDR94_RS16805 PF00989 PAS fold NDR94_RS16805 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS16805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS16810 PF02954 Bacterial regulatory protein, Fis family NDR94_RS16810 PF00072 Response regulator receiver domain NDR94_RS16810 PF00158 Sigma-54 interaction domain NDR94_RS16815 PF12627 Probable RNA and SrmB- binding site of polymerase A NDR94_RS16815 PF12626 Polymerase A arginine-rich C-terminus NDR94_RS16815 PF01743 Poly A polymerase head domain NDR94_RS16820 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NDR94_RS16825 PF02548 Ketopantoate hydroxymethyltransferase NDR94_RS16830 PF02569 Pantoate-beta-alanine ligase NDR94_RS16835 PF02261 Aspartate decarboxylase NDR94_RS16840 PF00342 Phosphoglucose isomerase NDR94_RS16850 PF10672 S-adenosylmethionine-dependent methyltransferase NDR94_RS16850 PF17785 PUA-like domain NDR94_RS16870 PF04972 BON domain NDR94_RS16875 PF03725 3' exoribonuclease family, domain 2 NDR94_RS16875 PF00575 S1 RNA binding domain NDR94_RS16875 PF01138 3' exoribonuclease family, domain 1 NDR94_RS16875 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NDR94_RS16875 PF00013 KH domain NDR94_RS16880 PF00312 Ribosomal protein S15 NDR94_RS16885 PF09157 Pseudouridine synthase II TruB, C-terminal NDR94_RS16885 PF16198 tRNA pseudouridylate synthase B C-terminal domain NDR94_RS16885 PF01509 TruB family pseudouridylate synthase (N terminal domain) NDR94_RS16890 PF02033 Ribosome-binding factor A NDR94_RS16895 PF00009 Elongation factor Tu GTP binding domain NDR94_RS16895 PF11987 Translation-initiation factor 2 NDR94_RS16895 PF08364 Bacterial translation initiation factor IF-2 associated region NDR94_RS16895 PF04760 Translation initiation factor IF-2, N-terminal region NDR94_RS16900 PF13184 NusA-like KH domain NDR94_RS16900 PF08529 NusA N-terminal domain NDR94_RS16905 PF17384 RimP C-terminal SH3 domain NDR94_RS16905 PF02576 RimP N-terminal domain NDR94_RS16920 PF03840 Preprotein translocase SecG subunit NDR94_RS16925 PF00121 Triosephosphate isomerase NDR94_RS16930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NDR94_RS16930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NDR94_RS16930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NDR94_RS16930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NDR94_RS16935 PF00809 Pterin binding enzyme NDR94_RS16940 PF00004 ATPase family associated with various cellular activities (AAA) NDR94_RS16940 PF17862 AAA+ lid domain NDR94_RS16940 PF06480 FtsH Extracellular NDR94_RS16940 PF01434 Peptidase family M41 NDR94_RS16945 PF01985 CRS1 / YhbY (CRM) domain NDR94_RS16955 PF03449 Transcription elongation factor, N-terminal NDR94_RS16955 PF01272 Transcription elongation factor, GreA/GreB, C-term NDR94_RS16960 PF02142 MGS-like domain NDR94_RS16960 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NDR94_RS16960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NDR94_RS16965 PF00117 Glutamine amidotransferase class-I NDR94_RS16965 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NDR94_RS16970 PF01113 Dihydrodipicolinate reductase, N-terminus NDR94_RS16970 PF05173 Dihydrodipicolinate reductase, C-terminus NDR94_RS16975 PF01556 DnaJ C terminal domain NDR94_RS16975 PF00226 DnaJ domain NDR94_RS16975 PF00684 DnaJ central domain NDR94_RS16980 PF00012 Hsp70 protein NDR94_RS16985 PF01025 GrpE NDR94_RS16990 PF02463 RecF/RecN/SMC N terminal domain NDR94_RS16995 PF01475 Ferric uptake regulator family NDR94_RS17000 PF04355 SmpA / OmlA family NDR94_RS17005 PF03658 RnfH family Ubiquitin NDR94_RS17010 PF03364 Polyketide cyclase / dehydrase and lipid transport NDR94_RS17015 PF01668 SmpB protein NDR94_RS17020 PF07729 FCD domain NDR94_RS17020 PF00392 Bacterial regulatory proteins, gntR family NDR94_RS17025 PF02652 L-lactate permease NDR94_RS17030 PF02754 Cysteine-rich domain NDR94_RS17035 PF11870 Domain of unknown function (DUF3390) NDR94_RS17035 PF13183 4Fe-4S dicluster domain NDR94_RS17035 PF02589 LUD domain NDR94_RS17040 PF02589 LUD domain NDR94_RS17090 PF00817 impB/mucB/samB family NDR94_RS17090 PF11799 impB/mucB/samB family C-terminal domain NDR94_RS17090 PF13438 Domain of unknown function (DUF4113) NDR94_RS17120 PF00717 Peptidase S24-like NDR94_RS17125 PF02586 SOS response associated peptidase (SRAP) NDR94_RS17130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS17130 PF03466 LysR substrate binding domain NDR94_RS17135 PF00248 Aldo/keto reductase family NDR94_RS17155 PF00873 AcrB/AcrD/AcrF family NDR94_RS17160 PF00529 HlyD membrane-fusion protein of T1SS NDR94_RS17160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NDR94_RS17175 PF00175 Oxidoreductase NAD-binding domain NDR94_RS17175 PF00042 Globin NDR94_RS17175 PF00970 Oxidoreductase FAD-binding domain NDR94_RS17220 PF03050 Transposase IS66 family NDR94_RS17220 PF13817 IS66 C-terminal element NDR94_RS17220 PF13007 Transposase C of IS166 homeodomain NDR94_RS17220 PF13005 zinc-finger binding domain of transposase IS66 NDR94_RS17240 PF05275 Copper resistance protein B precursor (CopB) NDR94_RS17250 PF07732 Multicopper oxidase NDR94_RS17250 PF00394 Multicopper oxidase NDR94_RS17250 PF07731 Multicopper oxidase NDR94_RS17255 PF11412 Disulphide bond corrector protein DsbC NDR94_RS17255 PF02683 Cytochrome C biogenesis protein transmembrane region NDR94_RS17265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NDR94_RS17265 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDR94_RS17265 PF00403 Heavy-metal-associated domain NDR94_RS17280 PF00072 Response regulator receiver domain NDR94_RS17280 PF00486 Transcriptional regulatory protein, C terminal NDR94_RS17285 PF00672 HAMP domain NDR94_RS17285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS17285 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS17290 PF03860 Domain of Unknown Function (DUF326) NDR94_RS17295 PF00665 Integrase core domain NDR94_RS17300 PF01695 IstB-like ATP binding protein NDR94_RS17310 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NDR94_RS17335 PF00999 Sodium/hydrogen exchanger family NDR94_RS17335 PF03471 Transporter associated domain NDR94_RS17335 PF02080 TrkA-C domain NDR94_RS17345 PF02887 Pyruvate kinase, alpha/beta domain NDR94_RS17345 PF00224 Pyruvate kinase, barrel domain NDR94_RS17350 PF00589 Phage integrase family NDR94_RS17350 PF02899 Phage integrase, N-terminal SAM-like domain NDR94_RS17360 PF00665 Integrase core domain NDR94_RS17365 PF01695 IstB-like ATP binding protein NDR94_RS17415 PF00665 Integrase core domain NDR94_RS17415 PF13936 Helix-turn-helix domain NDR94_RS17420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS17420 PF00672 HAMP domain NDR94_RS17420 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS17425 PF00072 Response regulator receiver domain NDR94_RS17425 PF00486 Transcriptional regulatory protein, C terminal NDR94_RS17430 PF03573 outer membrane porin, OprD family NDR94_RS17435 PF02321 Outer membrane efflux protein NDR94_RS17440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NDR94_RS17440 PF00529 HlyD membrane-fusion protein of T1SS NDR94_RS17445 PF00873 AcrB/AcrD/AcrF family NDR94_RS17455 PF16916 Dimerisation domain of Zinc Transporter NDR94_RS17455 PF01545 Cation efflux family NDR94_RS17470 PF00376 MerR family regulatory protein NDR94_RS17470 PF09278 MerR, DNA binding NDR94_RS17475 PF02411 MerT mercuric transport protein NDR94_RS17480 PF00403 Heavy-metal-associated domain NDR94_RS17490 PF13700 Domain of unknown function (DUF4158) NDR94_RS17490 PF01526 Tn3 transposase DDE domain NDR94_RS17510 PF13361 UvrD-like helicase C-terminal domain NDR94_RS17510 PF00580 UvrD/REP helicase N-terminal domain NDR94_RS17515 PF00271 Helicase conserved C-terminal domain NDR94_RS17515 PF00270 DEAD/DEAH box helicase NDR94_RS17515 PF09369 Domain of unknown function (DUF1998) NDR94_RS17550 PF00176 SNF2 family N-terminal domain NDR94_RS17550 PF18337 RapA N-terminal Tudor like domain NDR94_RS17550 PF12137 RNA polymerase recycling family C-terminal NDR94_RS17550 PF00271 Helicase conserved C-terminal domain NDR94_RS17550 PF18339 RapA N-terminal Tudor like domain 1 NDR94_RS17585 PF00004 ATPase family associated with various cellular activities (AAA) NDR94_RS17585 PF02190 ATP-dependent protease La (LON) substrate-binding domain NDR94_RS17585 PF05362 Lon protease (S16) C-terminal proteolytic domain NDR94_RS17655 PF13005 zinc-finger binding domain of transposase IS66 NDR94_RS17655 PF03050 Transposase IS66 family NDR94_RS17655 PF13817 IS66 C-terminal element NDR94_RS17655 PF13007 Transposase C of IS166 homeodomain NDR94_RS17680 PF01810 LysE type translocator NDR94_RS17685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS17685 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS17685 PF08448 PAS fold NDR94_RS17685 PF13188 PAS domain NDR94_RS17685 PF00072 Response regulator receiver domain NDR94_RS17690 PF00005 ABC transporter NDR94_RS17690 PF17912 MalK OB fold domain NDR94_RS17695 PF00128 Alpha amylase, catalytic domain NDR94_RS17700 PF14602 Hexapeptide repeat of succinyl-transferase NDR94_RS17700 PF12464 Maltose acetyltransferase NDR94_RS17705 PF13417 Glutathione S-transferase, N-terminal domain NDR94_RS17715 PF17874 MalT-like TPR region NDR94_RS17715 PF00196 Bacterial regulatory proteins, luxR family NDR94_RS17720 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS17725 PF14785 Maltose transport system permease protein MalF P2 domain NDR94_RS17725 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS17730 PF01547 Bacterial extracellular solute-binding protein NDR94_RS17735 PF00128 Alpha amylase, catalytic domain NDR94_RS17745 PF00128 Alpha amylase, catalytic domain NDR94_RS17745 PF00686 Starch binding domain NDR94_RS17745 PF09081 Domain of unknown function (DUF1921) NDR94_RS17750 PF02264 LamB porin NDR94_RS17755 PF07148 Maltose operon periplasmic protein precursor (MalM) NDR94_RS17760 PF00893 Small Multidrug Resistance protein NDR94_RS17765 PF00248 Aldo/keto reductase family NDR94_RS17770 PF00171 Aldehyde dehydrogenase family NDR94_RS17775 PF01081 KDPG and KHG aldolase NDR94_RS17780 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NDR94_RS17785 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NDR94_RS17785 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NDR94_RS17790 PF01418 Helix-turn-helix domain, rpiR family NDR94_RS17790 PF01380 SIS domain NDR94_RS17795 PF02685 Glucokinase NDR94_RS17800 PF00920 Dehydratase family NDR94_RS17810 PF07690 Major Facilitator Superfamily NDR94_RS17815 PF10634 Fe2+ transport protein NDR94_RS17835 PF04055 Radical SAM superfamily NDR94_RS17855 PF08859 DGC domain NDR94_RS17860 PF02036 SCP-2 sterol transfer family NDR94_RS17865 PF01136 Peptidase family U32 NDR94_RS17870 PF01136 Peptidase family U32 NDR94_RS17880 PF02954 Bacterial regulatory protein, Fis family NDR94_RS17880 PF00158 Sigma-54 interaction domain NDR94_RS17885 PF04405 Domain of Unknown function (DUF542) NDR94_RS17885 PF01814 Hemerythrin HHE cation binding domain NDR94_RS17905 PF00092 von Willebrand factor type A domain NDR94_RS17910 PF00115 Cytochrome C and Quinol oxidase polypeptide I NDR94_RS17915 PF00034 Cytochrome c NDR94_RS17920 PF17805 AsnC-like ligand binding domain NDR94_RS17925 PF17805 AsnC-like ligand binding domain NDR94_RS17925 PF13404 AsnC-type helix-turn-helix domain NDR94_RS17930 PF17805 AsnC-like ligand binding domain NDR94_RS17935 PF17805 AsnC-like ligand binding domain NDR94_RS17945 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NDR94_RS17950 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NDR94_RS17955 PF09459 Ethylbenzene dehydrogenase NDR94_RS17960 PF03264 NapC/NirT cytochrome c family, N-terminal region NDR94_RS17965 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NDR94_RS17970 PF07728 AAA domain (dynein-related subfamily) NDR94_RS17970 PF08406 CbbQ/NirQ/NorQ C-terminal NDR94_RS17975 PF00510 Cytochrome c oxidase subunit III NDR94_RS17980 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NDR94_RS17985 PF04055 Radical SAM superfamily NDR94_RS17985 PF13186 Iron-sulfur cluster-binding domain NDR94_RS17990 PF10414 Sirohaem synthase dimerisation region NDR94_RS17990 PF14824 Sirohaem biosynthesis protein central NDR94_RS17990 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NDR94_RS18000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS18000 PF03466 LysR substrate binding domain NDR94_RS18005 PF01743 Poly A polymerase head domain NDR94_RS18005 PF00571 CBS domain NDR94_RS18015 PF12729 Four helix bundle sensory module for signal transduction NDR94_RS18015 PF00672 HAMP domain NDR94_RS18015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS18030 PF02416 mttA/Hcf106 family NDR94_RS18035 PF05573 NosL NDR94_RS18040 PF12679 ABC-2 family transporter protein NDR94_RS18045 PF00005 ABC transporter NDR94_RS18050 PF05048 Periplasmic copper-binding protein (NosD) NDR94_RS18055 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NDR94_RS18055 PF18764 Nitrous oxide reductase propeller repeat NDR94_RS18055 PF18793 Nitrous oxide reductase propeller repeat 2 NDR94_RS18060 PF12801 4Fe-4S binding domain NDR94_RS18060 PF04205 FMN-binding domain NDR94_RS18065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NDR94_RS18065 PF02770 Acyl-CoA dehydrogenase, middle domain NDR94_RS18065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NDR94_RS18080 PF04343 Protein of unknown function, DUF488 NDR94_RS18085 PF03480 Bacterial extracellular solute-binding protein, family 7 NDR94_RS18095 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDR94_RS18100 PF03313 Serine dehydratase alpha chain NDR94_RS18100 PF03315 Serine dehydratase beta chain NDR94_RS18105 PF01339 CheB methylesterase NDR94_RS18105 PF01739 CheR methyltransferase, SAM binding domain NDR94_RS18105 PF03705 CheR methyltransferase, all-alpha domain NDR94_RS18105 PF08448 PAS fold NDR94_RS18110 PF00158 Sigma-54 interaction domain NDR94_RS18110 PF18024 Helix-turn-helix domain NDR94_RS18115 PF00351 Biopterin-dependent aromatic amino acid hydroxylase NDR94_RS18120 PF01329 Pterin 4 alpha carbinolamine dehydratase NDR94_RS18125 PF00155 Aminotransferase class I and II NDR94_RS18135 PF02560 Cyanate lyase C-terminal domain NDR94_RS18145 PF00199 Catalase NDR94_RS18145 PF06628 Catalase-related immune-responsive NDR94_RS18150 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NDR94_RS18155 PF07969 Amidohydrolase family NDR94_RS18165 PF03061 Thioesterase superfamily NDR94_RS18170 PF08274 PhnA Zinc-Ribbon NDR94_RS18170 PF03831 PhnA domain NDR94_RS18175 PF00313 'Cold-shock' DNA-binding domain NDR94_RS18185 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS18195 PF02653 Branched-chain amino acid transport system / permease component NDR94_RS18205 PF00005 ABC transporter NDR94_RS18210 PF02608 ABC transporter substrate-binding protein PnrA-like NDR94_RS18230 PF07995 Glucose / Sorbosone dehydrogenase NDR94_RS18240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NDR94_RS18250 PF02627 Carboxymuconolactone decarboxylase family NDR94_RS18260 PF01965 DJ-1/PfpI family NDR94_RS18260 PF12833 Helix-turn-helix domain NDR94_RS18275 PF08362 YcdC-like protein, C-terminal region NDR94_RS18275 PF00440 Bacterial regulatory proteins, tetR family NDR94_RS18280 PF00296 Luciferase-like monooxygenase NDR94_RS18285 PF00857 Isochorismatase family NDR94_RS18290 PF01042 Endoribonuclease L-PSP NDR94_RS18295 PF00561 alpha/beta hydrolase fold NDR94_RS18300 PF00881 Nitroreductase family NDR94_RS18305 PF01613 Flavin reductase like domain NDR94_RS18310 PF01258 Prokaryotic dksA/traR C4-type zinc finger NDR94_RS18315 PF07683 Cobalamin synthesis protein cobW C-terminal domain NDR94_RS18315 PF02492 CobW/HypB/UreG, nucleotide-binding domain NDR94_RS18325 PF03860 Domain of Unknown Function (DUF326) NDR94_RS18330 PF01205 Uncharacterized protein family UPF0029 NDR94_RS18335 PF00962 Adenosine/AMP deaminase NDR94_RS18345 PF07690 Major Facilitator Superfamily NDR94_RS18350 PF08361 MAATS-type transcriptional repressor, C-terminal region NDR94_RS18350 PF00440 Bacterial regulatory proteins, tetR family NDR94_RS18360 PF00403 Heavy-metal-associated domain NDR94_RS18365 PF09278 MerR, DNA binding NDR94_RS18365 PF00376 MerR family regulatory protein NDR94_RS18370 PF16591 Helical bimodular sensor domain NDR94_RS18370 PF00672 HAMP domain NDR94_RS18370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS18375 PF00210 Ferritin-like domain NDR94_RS18380 PF13533 Biotin-lipoyl like NDR94_RS18385 PF00873 AcrB/AcrD/AcrF family NDR94_RS18400 PF02805 Metal binding domain of Ada NDR94_RS18400 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NDR94_RS18400 PF12833 Helix-turn-helix domain NDR94_RS18400 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NDR94_RS18410 PF01026 TatD related DNase NDR94_RS18415 PF00672 HAMP domain NDR94_RS18415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS18415 PF17200 Single Cache domain 2 NDR94_RS18425 PF01510 N-acetylmuramoyl-L-alanine amidase NDR94_RS18430 PF04493 Endonuclease V NDR94_RS18435 PF12833 Helix-turn-helix domain NDR94_RS18440 PF03969 AFG1-like ATPase NDR94_RS18445 PF00579 tRNA synthetases class I (W and Y) NDR94_RS18450 PF02129 X-Pro dipeptidyl-peptidase (S15 family) NDR94_RS18460 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NDR94_RS18460 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NDR94_RS18475 PF07992 Pyridine nucleotide-disulphide oxidoreductase NDR94_RS18495 PF00004 ATPase family associated with various cellular activities (AAA) NDR94_RS18495 PF07724 AAA domain (Cdc48 subfamily) NDR94_RS18495 PF10431 C-terminal, D2-small domain, of ClpB protein NDR94_RS18495 PF02861 Clp amino terminal domain, pathogenicity island component NDR94_RS18495 PF17871 AAA lid domain NDR94_RS18500 PF02578 Multi-copper polyphenol oxidoreductase laccase NDR94_RS18505 PF00849 RNA pseudouridylate synthase NDR94_RS18505 PF01479 S4 domain NDR94_RS18510 PF13525 Outer membrane lipoprotein NDR94_RS18520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS18520 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS18525 PF00072 Response regulator receiver domain NDR94_RS18525 PF00158 Sigma-54 interaction domain NDR94_RS18525 PF02954 Bacterial regulatory protein, Fis family NDR94_RS18535 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS18535 PF00072 Response regulator receiver domain NDR94_RS18540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS18545 PF04055 Radical SAM superfamily NDR94_RS18545 PF08497 Radical SAM N-terminal NDR94_RS18545 PF11842 Domain of unknown function (DUF3362) NDR94_RS18550 PF13188 PAS domain NDR94_RS18550 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS18550 PF00563 EAL domain NDR94_RS18550 PF03707 Bacterial signalling protein N terminal repeat NDR94_RS18555 PF00842 Alanine racemase, C-terminal domain NDR94_RS18555 PF01168 Alanine racemase, N-terminal domain NDR94_RS18560 PF00772 DnaB-like helicase N terminal domain NDR94_RS18560 PF03796 DnaB-like helicase C terminal domain NDR94_RS18565 PF03948 Ribosomal protein L9, C-terminal domain NDR94_RS18565 PF01281 Ribosomal protein L9, N-terminal domain NDR94_RS18575 PF01084 Ribosomal protein S18 NDR94_RS18580 PF01250 Ribosomal protein S6 NDR94_RS18585 PF13426 PAS domain NDR94_RS18585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS18585 PF00072 Response regulator receiver domain NDR94_RS18590 PF08032 RNA 2'-O ribose methyltransferase substrate binding NDR94_RS18590 PF00588 SpoU rRNA Methylase family NDR94_RS18595 PF08206 Ribonuclease B OB domain NDR94_RS18595 PF00575 S1 RNA binding domain NDR94_RS18595 PF17876 Cold shock domain NDR94_RS18595 PF08461 Ribonuclease R winged-helix domain NDR94_RS18595 PF00773 RNB domain NDR94_RS18610 PF00709 Adenylosuccinate synthetase NDR94_RS18615 PF13393 Histidyl-tRNA synthetase NDR94_RS18620 PF01145 SPFH domain / Band 7 family NDR94_RS18625 PF01145 SPFH domain / Band 7 family NDR94_RS18625 PF12221 Bacterial membrane protein N terminal NDR94_RS18630 PF16360 GTP-binding GTPase Middle Region NDR94_RS18630 PF13167 GTP-binding GTPase N-terminal NDR94_RS18630 PF01926 50S ribosome-binding GTPase NDR94_RS18635 PF17209 Hfq protein NDR94_RS18645 PF01119 DNA mismatch repair protein, C-terminal domain NDR94_RS18645 PF08676 MutL C terminal dimerisation domain NDR94_RS18650 PF01520 N-acetylmuramoyl-L-alanine amidase NDR94_RS18650 PF11741 AMIN domain NDR94_RS18655 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NDR94_RS18660 PF01256 Carbohydrate kinase NDR94_RS18660 PF03853 YjeF-related protein N-terminus NDR94_RS18665 PF08331 Domain of unknown function (DUF1730) NDR94_RS18670 PF00004 ATPase family associated with various cellular activities (AAA) NDR94_RS18670 PF06480 FtsH Extracellular NDR94_RS18670 PF01434 Peptidase family M41 NDR94_RS18670 PF17862 AAA+ lid domain NDR94_RS18680 PF02441 Flavoprotein NDR94_RS18685 PF01225 Mur ligase family, catalytic domain NDR94_RS18685 PF02875 Mur ligase family, glutamate ligase domain NDR94_RS18685 PF08245 Mur ligase middle domain NDR94_RS18690 PF00171 Aldehyde dehydrogenase family NDR94_RS18695 PF13520 Amino acid permease NDR94_RS18700 PF06751 Ethanolamine ammonia lyase large subunit (EutB) NDR94_RS18705 PF05985 Ethanolamine ammonia-lyase light chain (EutC) NDR94_RS18710 PF16655 PhoD-like phosphatase, N-terminal domain NDR94_RS18710 PF09423 PhoD-like phosphatase NDR94_RS18720 PF06167 Glucose-regulated metallo-peptidase M90 NDR94_RS18725 PF00719 Inorganic pyrophosphatase NDR94_RS18730 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS18755 PF00563 EAL domain NDR94_RS18755 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS18755 PF03707 Bacterial signalling protein N terminal repeat NDR94_RS18760 PF00639 PPIC-type PPIASE domain NDR94_RS18760 PF09312 SurA N-terminal domain NDR94_RS18765 PF00384 Molybdopterin oxidoreductase NDR94_RS18765 PF01568 Molydopterin dinucleotide binding domain NDR94_RS18765 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NDR94_RS18770 PF03916 Polysulphide reductase, NrfD NDR94_RS18775 PF13247 4Fe-4S dicluster domain NDR94_RS18780 PF00578 AhpC/TSA family NDR94_RS18785 PF00282 Pyridoxal-dependent decarboxylase conserved domain NDR94_RS18790 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NDR94_RS18805 PF04183 IucA / IucC family NDR94_RS18805 PF06276 Ferric iron reductase FhuF-like transporter NDR94_RS18815 PF02609 Exonuclease VII small subunit NDR94_RS18820 PF00348 Polyprenyl synthetase NDR94_RS18825 PF02779 Transketolase, pyrimidine binding domain NDR94_RS18825 PF02780 Transketolase, C-terminal domain NDR94_RS18825 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NDR94_RS18855 PF00270 DEAD/DEAH box helicase NDR94_RS18855 PF08482 ATP-dependent helicase C-terminal NDR94_RS18855 PF00271 Helicase conserved C-terminal domain NDR94_RS18855 PF04408 Helicase associated domain (HA2) NDR94_RS18870 PF16916 Dimerisation domain of Zinc Transporter NDR94_RS18870 PF01545 Cation efflux family NDR94_RS18875 PF01037 Lrp/AsnC ligand binding domain NDR94_RS18875 PF13404 AsnC-type helix-turn-helix domain NDR94_RS18890 PF00849 RNA pseudouridylate synthase NDR94_RS18900 PF02653 Branched-chain amino acid transport system / permease component NDR94_RS18905 PF02653 Branched-chain amino acid transport system / permease component NDR94_RS18910 PF00005 ABC transporter NDR94_RS18910 PF12399 Branched-chain amino acid ATP-binding cassette transporter NDR94_RS18915 PF00005 ABC transporter NDR94_RS18920 PF00689 Cation transporting ATPase, C-terminus NDR94_RS18920 PF00690 Cation transporter/ATPase, N-terminus NDR94_RS18925 PF01774 UreD urease accessory protein NDR94_RS18930 PF00547 Urease, gamma subunit NDR94_RS18940 PF00699 Urease beta subunit NDR94_RS18945 PF01979 Amidohydrolase family NDR94_RS18945 PF00449 Urease alpha-subunit, N-terminal domain NDR94_RS18950 PF00360 Phytochrome region NDR94_RS18950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS18950 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS18950 PF01590 GAF domain NDR94_RS18950 PF08446 PAS fold NDR94_RS18955 PF01258 Prokaryotic dksA/traR C4-type zinc finger NDR94_RS18980 PF02814 UreE urease accessory protein, N-terminal domain NDR94_RS18980 PF05194 UreE urease accessory protein, C-terminal domain NDR94_RS18985 PF01730 UreF NDR94_RS18990 PF02492 CobW/HypB/UreG, nucleotide-binding domain NDR94_RS18995 PF04955 HupE / UreJ protein NDR94_RS19000 PF01011 PQQ enzyme repeat NDR94_RS19005 PF13360 PQQ-like domain NDR94_RS19010 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus NDR94_RS19010 PF01048 Phosphorylase superfamily NDR94_RS19015 PF00155 Aminotransferase class I and II NDR94_RS19015 PF00392 Bacterial regulatory proteins, gntR family NDR94_RS19030 PF09704 CRISPR-associated protein (Cas_Cas5) NDR94_RS19050 PF01867 CRISPR associated protein Cas1 NDR94_RS19055 PF09827 CRISPR associated protein Cas2 NDR94_RS19065 PF18158 Adaptive response protein AidB N-terminal domain NDR94_RS19065 PF02770 Acyl-CoA dehydrogenase, middle domain NDR94_RS19065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NDR94_RS19070 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NDR94_RS19070 PF00072 Response regulator receiver domain NDR94_RS19070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS19070 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS19070 PF00672 HAMP domain NDR94_RS19070 PF01627 Hpt domain NDR94_RS19075 PF08543 Phosphomethylpyrimidine kinase NDR94_RS19075 PF02581 Thiamine monophosphate synthase NDR94_RS19080 PF02581 Thiamine monophosphate synthase NDR94_RS19085 PF00202 Aminotransferase class-III NDR94_RS19100 PF04055 Radical SAM superfamily NDR94_RS19100 PF01938 TRAM domain NDR94_RS19100 PF00919 Uncharacterized protein family UPF0004 NDR94_RS19105 PF02562 PhoH-like protein NDR94_RS19110 PF02130 Uncharacterized protein family UPF0054 NDR94_RS19115 PF00571 CBS domain NDR94_RS19115 PF03471 Transporter associated domain NDR94_RS19120 PF00795 Carbon-nitrogen hydrolase NDR94_RS19135 PF08264 Anticodon-binding domain of tRNA NDR94_RS19135 PF13603 Leucyl-tRNA synthetase, Domain 2 NDR94_RS19135 PF09334 tRNA synthetases class I (M) NDR94_RS19135 PF00133 tRNA synthetases class I (I, L, M and V) NDR94_RS19150 PF03889 Alternative ribosome-rescue factor A NDR94_RS19155 PF13406 Transglycosylase SLT domain NDR94_RS19165 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NDR94_RS19165 PF04055 Radical SAM superfamily NDR94_RS19170 PF03099 Biotin/lipoate A/B protein ligase family NDR94_RS19175 PF04359 Protein of unknown function (DUF493) NDR94_RS19180 PF07943 Penicillin-binding protein 5, C-terminal domain NDR94_RS19180 PF00768 D-alanyl-D-alanine carboxypeptidase NDR94_RS19185 PF03330 Lytic transglycolase NDR94_RS19185 PF05036 Sporulation related domain NDR94_RS19190 PF13406 Transglycosylase SLT domain NDR94_RS19195 PF01098 Cell cycle protein NDR94_RS19200 PF03717 Penicillin-binding Protein dimerisation domain NDR94_RS19200 PF00905 Penicillin binding protein transpeptidase domain NDR94_RS19205 PF02590 Predicted SPOUT methyltransferase NDR94_RS19215 PF01467 Cytidylyltransferase-like NDR94_RS19220 PF00171 Aldehyde dehydrogenase family NDR94_RS19225 PF09335 SNARE associated Golgi protein NDR94_RS19235 PF04172 LrgB-like family NDR94_RS19240 PF03788 LrgA family NDR94_RS19245 PF01575 MaoC like domain NDR94_RS19255 PF13460 NAD(P)H-binding NDR94_RS19260 PF00929 Exonuclease NDR94_RS19270 PF03193 RsgA GTPase NDR94_RS19275 PF13677 Membrane MotB of proton-channel complex MotA/MotB NDR94_RS19275 PF00691 OmpA family NDR94_RS19280 PF01618 MotA/TolQ/ExbB proton channel family NDR94_RS19290 PF00581 Rhodanese-like domain NDR94_RS19295 PF02666 Phosphatidylserine decarboxylase NDR94_RS19305 PF00563 EAL domain NDR94_RS19305 PF05231 MASE1 NDR94_RS19310 PF08240 Alcohol dehydrogenase GroES-like domain NDR94_RS19310 PF00107 Zinc-binding dehydrogenase NDR94_RS19330 PF03989 DNA gyrase C-terminal domain, beta-propeller NDR94_RS19330 PF00521 DNA gyrase/topoisomerase IV, subunit A NDR94_RS19345 PF00204 DNA gyrase B NDR94_RS19345 PF00986 DNA gyrase B subunit, carboxyl terminus NDR94_RS19345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS19345 PF01751 Toprim domain NDR94_RS19350 PF05728 Uncharacterised protein family (UPF0227) NDR94_RS19355 PF00149 Calcineurin-like phosphoesterase NDR94_RS19365 PF00293 NUDIX domain NDR94_RS19375 PF13667 ThiC-associated domain NDR94_RS19375 PF01964 Radical SAM ThiC family NDR94_RS19380 PF02321 Outer membrane efflux protein NDR94_RS19385 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NDR94_RS19390 PF00893 Small Multidrug Resistance protein NDR94_RS19395 PF01266 FAD dependent oxidoreductase NDR94_RS19400 PF00248 Aldo/keto reductase family NDR94_RS19420 PF01467 Cytidylyltransferase-like NDR94_RS19420 PF00294 pfkB family carbohydrate kinase NDR94_RS19445 PF00664 ABC transporter transmembrane region NDR94_RS19445 PF00005 ABC transporter NDR94_RS19470 PF03102 NeuB family NDR94_RS19470 PF08666 SAF domain NDR94_RS19485 PF02348 Cytidylyltransferase NDR94_RS19490 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NDR94_RS19495 PF02719 Polysaccharide biosynthesis protein NDR94_RS19505 PF16861 Carbamoyltransferase C-terminus NDR94_RS19505 PF02543 Carbamoyltransferase N-terminus NDR94_RS19530 PF00534 Glycosyl transferases group 1 NDR94_RS19530 PF13439 Glycosyltransferase Family 4 NDR94_RS19535 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NDR94_RS19540 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NDR94_RS19545 PF01063 Amino-transferase class IV NDR94_RS19550 PF03710 Glutamate-ammonia ligase adenylyltransferase NDR94_RS19550 PF08335 GlnD PII-uridylyltransferase NDR94_RS19555 PF00456 Transketolase, thiamine diphosphate binding domain NDR94_RS19555 PF17831 Pyruvate dehydrogenase E1 component middle domain NDR94_RS19560 PF00364 Biotin-requiring enzyme NDR94_RS19560 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NDR94_RS19560 PF02817 e3 binding domain NDR94_RS19570 PF00563 EAL domain NDR94_RS19570 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS19570 PF03707 Bacterial signalling protein N terminal repeat NDR94_RS19575 PF01625 Peptide methionine sulfoxide reductase NDR94_RS19580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NDR94_RS19580 PF02770 Acyl-CoA dehydrogenase, middle domain NDR94_RS19580 PF12806 Acetyl-CoA dehydrogenase C-terminal like NDR94_RS19580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NDR94_RS19585 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS19590 PF12806 Acetyl-CoA dehydrogenase C-terminal like NDR94_RS19590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NDR94_RS19590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NDR94_RS19590 PF02770 Acyl-CoA dehydrogenase, middle domain NDR94_RS19605 PF08241 Methyltransferase domain NDR94_RS19610 PF08241 Methyltransferase domain NDR94_RS19610 PF12697 Alpha/beta hydrolase family NDR94_RS19615 PF00155 Aminotransferase class I and II NDR94_RS19620 PF04055 Radical SAM superfamily NDR94_RS19620 PF06968 Biotin and Thiamin Synthesis associated domain NDR94_RS19625 PF00156 Phosphoribosyl transferase domain NDR94_RS19630 PF01636 Phosphotransferase enzyme family NDR94_RS19635 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NDR94_RS19640 PF03060 Nitronate monooxygenase NDR94_RS19645 PF04116 Fatty acid hydroxylase superfamily NDR94_RS19655 PF01593 Flavin containing amine oxidoreductase NDR94_RS19665 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NDR94_RS19670 PF01070 FMN-dependent dehydrogenase NDR94_RS19675 PF00348 Polyprenyl synthetase NDR94_RS19680 PF12806 Acetyl-CoA dehydrogenase C-terminal like NDR94_RS19680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NDR94_RS19680 PF02770 Acyl-CoA dehydrogenase, middle domain NDR94_RS19680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NDR94_RS19685 PF03471 Transporter associated domain NDR94_RS19685 PF00999 Sodium/hydrogen exchanger family NDR94_RS19685 PF02080 TrkA-C domain NDR94_RS19690 PF12795 Mechanosensitive ion channel porin domain NDR94_RS19690 PF00924 Mechanosensitive ion channel NDR94_RS19690 PF12794 Mechanosensitive ion channel inner membrane domain 1 NDR94_RS19695 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NDR94_RS19700 PF00989 PAS fold NDR94_RS19700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS19700 PF16736 Single Cache-like NDR94_RS19700 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS19705 PF01339 CheB methylesterase NDR94_RS19710 PF01739 CheR methyltransferase, SAM binding domain NDR94_RS19710 PF03705 CheR methyltransferase, all-alpha domain NDR94_RS19715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS19715 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS19715 PF01627 Hpt domain NDR94_RS19715 PF00072 Response regulator receiver domain NDR94_RS19720 PF01679 Proteolipid membrane potential modulator NDR94_RS19725 PF00106 short chain dehydrogenase NDR94_RS19735 PF00753 Metallo-beta-lactamase superfamily NDR94_RS19745 PF01145 SPFH domain / Band 7 family NDR94_RS19745 PF16200 C-terminal region of band_7 NDR94_RS19760 PF01204 Trehalase NDR94_RS19770 PF00892 EamA-like transporter family NDR94_RS19780 PF01274 Malate synthase NDR94_RS19800 PF00474 Sodium:solute symporter family NDR94_RS19815 PF00271 Helicase conserved C-terminal domain NDR94_RS19815 PF03880 DbpA RNA binding domain NDR94_RS19815 PF00270 DEAD/DEAH box helicase NDR94_RS19820 PF12805 FUSC-like inner membrane protein yccS NDR94_RS19845 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS19845 PF00563 EAL domain NDR94_RS19845 PF03707 Bacterial signalling protein N terminal repeat NDR94_RS19865 PF03861 ANTAR domain NDR94_RS19865 PF00072 Response regulator receiver domain NDR94_RS19870 PF01116 Fructose-bisphosphate aldolase class-II NDR94_RS19885 PF00162 Phosphoglycerate kinase NDR94_RS19890 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NDR94_RS19890 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NDR94_RS19895 PF02779 Transketolase, pyrimidine binding domain NDR94_RS19895 PF02780 Transketolase, C-terminal domain NDR94_RS19895 PF00456 Transketolase, thiamine diphosphate binding domain NDR94_RS19900 PF03466 LysR substrate binding domain NDR94_RS19900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS19905 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NDR94_RS19915 PF13649 Methyltransferase domain NDR94_RS19920 PF00438 S-adenosylmethionine synthetase, N-terminal domain NDR94_RS19920 PF02772 S-adenosylmethionine synthetase, central domain NDR94_RS19920 PF02773 S-adenosylmethionine synthetase, C-terminal domain NDR94_RS19930 PF01061 ABC-2 type transporter NDR94_RS19935 PF00005 ABC transporter NDR94_RS19940 PF00111 2Fe-2S iron-sulfur cluster binding domain NDR94_RS19940 PF00175 Oxidoreductase NAD-binding domain NDR94_RS19940 PF00970 Oxidoreductase FAD-binding domain NDR94_RS19945 PF01653 NAD-dependent DNA ligase adenylation domain NDR94_RS19945 PF03120 NAD-dependent DNA ligase OB-fold domain NDR94_RS19965 PF05221 S-adenosyl-L-homocysteine hydrolase NDR94_RS19965 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NDR94_RS19970 PF02219 Methylenetetrahydrofolate reductase NDR94_RS19975 PF00271 Helicase conserved C-terminal domain NDR94_RS19975 PF00270 DEAD/DEAH box helicase NDR94_RS19980 PF02321 Outer membrane efflux protein NDR94_RS19980 PF08139 Prokaryotic membrane lipoprotein lipid attachment site NDR94_RS19985 PF00873 AcrB/AcrD/AcrF family NDR94_RS19990 PF00529 HlyD membrane-fusion protein of T1SS NDR94_RS19990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NDR94_RS19995 PF04264 YceI-like domain NDR94_RS20000 PF01292 Prokaryotic cytochrome b561 NDR94_RS20005 PF00202 Aminotransferase class-III NDR94_RS20010 PF04452 RNA methyltransferase NDR94_RS20020 PF01339 CheB methylesterase NDR94_RS20020 PF00072 Response regulator receiver domain NDR94_RS20025 PF00072 Response regulator receiver domain NDR94_RS20025 PF02895 Signal transducing histidine kinase, homodimeric domain NDR94_RS20025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS20025 PF01627 Hpt domain NDR94_RS20025 PF01584 CheW-like domain NDR94_RS20030 PF01739 CheR methyltransferase, SAM binding domain NDR94_RS20030 PF03705 CheR methyltransferase, all-alpha domain NDR94_RS20035 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NDR94_RS20035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS20040 PF01584 CheW-like domain NDR94_RS20045 PF00072 Response regulator receiver domain NDR94_RS20050 PF00072 Response regulator receiver domain NDR94_RS20055 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NDR94_RS20055 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NDR94_RS20065 PF02622 Uncharacterized ACR, COG1678 NDR94_RS20070 PF03652 Holliday junction resolvase NDR94_RS20075 PF00156 Phosphoribosyl transferase domain NDR94_RS20080 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NDR94_RS20080 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NDR94_RS20085 PF01979 Amidohydrolase family NDR94_RS20105 PF00437 Type II/IV secretion system protein NDR94_RS20110 PF00437 Type II/IV secretion system protein NDR94_RS20115 PF01168 Alanine racemase, N-terminal domain NDR94_RS20120 PF14748 Pyrroline-5-carboxylate reductase dimerisation NDR94_RS20120 PF03807 NADP oxidoreductase coenzyme F420-dependent NDR94_RS20125 PF02325 YGGT family NDR94_RS20135 PF00561 alpha/beta hydrolase fold NDR94_RS20140 PF07021 Methionine biosynthesis protein MetW NDR94_RS20140 PF00561 alpha/beta hydrolase fold NDR94_RS20150 PF01725 Ham1 family NDR94_RS20155 PF04055 Radical SAM superfamily NDR94_RS20155 PF06969 HemN C-terminal domain NDR94_RS20170 PF13520 Amino acid permease NDR94_RS20180 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NDR94_RS20180 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NDR94_RS20185 PF00696 Amino acid kinase family NDR94_RS20190 PF07044 Protein of unknown function (DUF1329) NDR94_RS20195 PF02390 Putative methyltransferase NDR94_RS20200 PF05690 Thiazole biosynthesis protein ThiG NDR94_RS20205 PF05690 Thiazole biosynthesis protein ThiG NDR94_RS20205 PF02597 ThiS family NDR94_RS20210 PF04241 Protein of unknown function (DUF423) NDR94_RS20215 PF00912 Transglycosylase NDR94_RS20220 PF00563 EAL domain NDR94_RS20220 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS20220 PF03707 Bacterial signalling protein N terminal repeat NDR94_RS20225 PF00672 HAMP domain NDR94_RS20225 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS20225 PF01627 Hpt domain NDR94_RS20225 PF00072 Response regulator receiver domain NDR94_RS20225 PF17149 Periplasmic sensor domain found in signal transduction proteins NDR94_RS20225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS20230 PF00140 Sigma-70 factor, region 1.2 NDR94_RS20230 PF04545 Sigma-70, region 4 NDR94_RS20230 PF04542 Sigma-70 region 2 NDR94_RS20235 PF18075 FtsX extracellular domain NDR94_RS20240 PF00005 ABC transporter NDR94_RS20245 PF00448 SRP54-type protein, GTPase domain NDR94_RS20245 PF02881 SRP54-type protein, helical bundle domain NDR94_RS20250 PF00675 Insulinase (Peptidase family M16) NDR94_RS20250 PF05193 Peptidase M16 inactive domain NDR94_RS20255 PF05193 Peptidase M16 inactive domain NDR94_RS20275 PF00440 Bacterial regulatory proteins, tetR family NDR94_RS20280 PF00171 Aldehyde dehydrogenase family NDR94_RS20290 PF05199 GMC oxidoreductase NDR94_RS20290 PF00732 GMC oxidoreductase NDR94_RS20295 PF01467 Cytidylyltransferase-like NDR94_RS20300 PF00037 4Fe-4S binding domain NDR94_RS20320 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NDR94_RS20320 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NDR94_RS20320 PF06827 Zinc finger found in FPG and IleRS NDR94_RS20330 PF01965 DJ-1/PfpI family NDR94_RS20335 PF10672 S-adenosylmethionine-dependent methyltransferase NDR94_RS20335 PF17785 PUA-like domain NDR94_RS20345 PF00920 Dehydratase family NDR94_RS20370 PF00186 Dihydrofolate reductase NDR94_RS20375 PF03009 Glycerophosphoryl diester phosphodiesterase family NDR94_RS20385 PF01926 50S ribosome-binding GTPase NDR94_RS20385 PF12631 MnmE helical domain NDR94_RS20385 PF10396 GTP-binding protein TrmE N-terminus NDR94_RS20395 PF03466 LysR substrate binding domain NDR94_RS20395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS20400 PF01895 PhoU domain NDR94_RS20405 PF00005 ABC transporter NDR94_RS20410 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS20415 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS20420 PF12849 PBP superfamily domain NDR94_RS20425 PF03061 Thioesterase superfamily NDR94_RS20430 PF00563 EAL domain NDR94_RS20430 PF01590 GAF domain NDR94_RS20430 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS20430 PF00360 Phytochrome region NDR94_RS20445 PF13538 UvrD-like helicase C-terminal domain NDR94_RS20450 PF13361 UvrD-like helicase C-terminal domain NDR94_RS20450 PF12705 PD-(D/E)XK nuclease superfamily NDR94_RS20450 PF00580 UvrD/REP helicase N-terminal domain NDR94_RS20455 PF17946 RecC C-terminal domain NDR94_RS20465 PF02690 Na+/Pi-cotransporter NDR94_RS20470 PF05145 Transition state regulatory protein AbrB NDR94_RS20475 PF01970 Tripartite tricarboxylate transporter TctA family NDR94_RS20490 PF03573 outer membrane porin, OprD family NDR94_RS20495 PF00072 Response regulator receiver domain NDR94_RS20495 PF00486 Transcriptional regulatory protein, C terminal NDR94_RS20500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS20500 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS20505 PF01590 GAF domain NDR94_RS20505 PF00563 EAL domain NDR94_RS20505 PF00360 Phytochrome region NDR94_RS20505 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS20510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS20510 PF08447 PAS fold NDR94_RS20520 PF17200 Single Cache domain 2 NDR94_RS20520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS20520 PF00672 HAMP domain NDR94_RS20525 PF16868 NMT1-like family NDR94_RS20535 PF07670 Nucleoside recognition NDR94_RS20555 PF00072 Response regulator receiver domain NDR94_RS20555 PF00158 Sigma-54 interaction domain NDR94_RS20555 PF02954 Bacterial regulatory protein, Fis family NDR94_RS20560 PF00672 HAMP domain NDR94_RS20560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS20560 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS20560 PF08448 PAS fold NDR94_RS20560 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB NDR94_RS20570 PF01510 N-acetylmuramoyl-L-alanine amidase NDR94_RS20575 PF00990 Diguanylate cyclase, GGDEF domain NDR94_RS20585 PF01323 DSBA-like thioredoxin domain NDR94_RS20590 PF00034 Cytochrome c NDR94_RS20595 PF01926 50S ribosome-binding GTPase NDR94_RS20600 PF02347 Glycine cleavage system P-protein NDR94_RS20605 PF01597 Glycine cleavage H-protein NDR94_RS20610 PF01571 Aminomethyltransferase folate-binding domain NDR94_RS20610 PF08669 Glycine cleavage T-protein C-terminal barrel domain NDR94_RS20615 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS20625 PF01494 FAD binding domain NDR94_RS20635 PF01494 FAD binding domain NDR94_RS20640 PF00557 Metallopeptidase family M24 NDR94_RS20640 PF05195 Aminopeptidase P, N-terminal domain NDR94_RS20645 PF03695 Uncharacterised protein family (UPF0149) NDR94_RS20655 PF05164 Cell division protein ZapA NDR94_RS20665 PF01812 5-formyltetrahydrofolate cyclo-ligase family NDR94_RS20685 PF08240 Alcohol dehydrogenase GroES-like domain NDR94_RS20685 PF00107 Zinc-binding dehydrogenase NDR94_RS20690 PF02556 Preprotein translocase subunit SecB NDR94_RS20695 PF00462 Glutaredoxin NDR94_RS20700 PF00581 Rhodanese-like domain NDR94_RS20705 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NDR94_RS20705 PF01676 Metalloenzyme superfamily NDR94_RS20710 PF01551 Peptidase family M23 NDR94_RS20715 PF13180 PDZ domain NDR94_RS20715 PF03572 Peptidase family S41 NDR94_RS20720 PF04748 Divergent polysaccharide deacetylase NDR94_RS20735 PF00977 Histidine biosynthesis protein NDR94_RS20740 PF00977 Histidine biosynthesis protein NDR94_RS20750 PF00117 Glutamine amidotransferase class-I NDR94_RS20755 PF00475 Imidazoleglycerol-phosphate dehydratase NDR94_RS20760 PF03861 ANTAR domain NDR94_RS20760 PF08376 Nitrate and nitrite sensing NDR94_RS20770 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS20775 PF00005 ABC transporter NDR94_RS20790 PF10576 Iron-sulfur binding domain of endonuclease III NDR94_RS20790 PF00633 Helix-hairpin-helix motif NDR94_RS20790 PF14815 NUDIX domain NDR94_RS20790 PF00730 HhH-GPD superfamily base excision DNA repair protein NDR94_RS20795 PF04362 Bacterial Fe(2+) trafficking NDR94_RS20805 PF00565 Staphylococcal nuclease homologue NDR94_RS20815 PF02028 BCCT, betaine/carnitine/choline family transporter NDR94_RS20820 PF00005 ABC transporter NDR94_RS20825 PF00497 Bacterial extracellular solute-binding proteins, family 3 NDR94_RS20830 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS20835 PF00528 Binding-protein-dependent transport system inner membrane component NDR94_RS20840 PF01263 Aldose 1-epimerase NDR94_RS20850 PF03466 LysR substrate binding domain NDR94_RS20850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS20855 PF01266 FAD dependent oxidoreductase NDR94_RS20860 PF00672 HAMP domain NDR94_RS20860 PF16591 Helical bimodular sensor domain NDR94_RS20860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NDR94_RS20875 PF00698 Acyl transferase domain NDR94_RS20880 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG NDR94_RS20890 PF01039 Carboxyl transferase domain NDR94_RS20895 PF06857 Malonate decarboxylase delta subunit (MdcD) NDR94_RS20900 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase NDR94_RS20905 PF16957 Malonate decarboxylase, alpha subunit, transporter NDR94_RS20910 PF00106 short chain dehydrogenase NDR94_RS20930 PF16868 NMT1-like family NDR94_RS20970 PF00296 Luciferase-like monooxygenase NDR94_RS20975 PF00999 Sodium/hydrogen exchanger family NDR94_RS20980 PF07311 Dodecin NDR94_RS20985 PF02798 Glutathione S-transferase, N-terminal domain NDR94_RS21005 PF00746 LPXTG cell wall anchor motif NDR94_RS21005 PF00149 Calcineurin-like phosphoesterase NDR94_RS21005 PF00565 Staphylococcal nuclease homologue NDR94_RS21005 PF02872 5'-nucleotidase, C-terminal domain NDR94_RS21020 PF03575 Peptidase family S51 NDR94_RS21025 PF00664 ABC transporter transmembrane region NDR94_RS21025 PF00005 ABC transporter NDR94_RS21045 PF04239 Protein of unknown function (DUF421) NDR94_RS21050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NDR94_RS21050 PF03466 LysR substrate binding domain NDR94_RS21065 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NDR94_RS21065 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NDR94_RS21065 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NDR94_RS21065 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NDR94_RS21075 PF08240 Alcohol dehydrogenase GroES-like domain NDR94_RS21085 PF00132 Bacterial transferase hexapeptide (six repeats) NDR94_RS21090 PF01432 Peptidase family M3 NDR94_RS21105 PF01757 Acyltransferase family NDR94_RS21110 PF04055 Radical SAM superfamily NDR94_RS21115 PF00484 Carbonic anhydrase NDR94_RS21120 PF00916 Sulfate permease family NDR94_RS21120 PF01740 STAS domain NDR94_RS21130 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NDR94_RS21130 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NDR94_RS21135 PF00115 Cytochrome C and Quinol oxidase polypeptide I NDR94_RS21140 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 NDR94_RS21145 PF00510 Cytochrome c oxidase subunit III NDR94_RS21170 PF01040 UbiA prenyltransferase family NDR94_RS21175 PF02630 SCO1/SenC NDR94_RS21185 PF00593 TonB dependent receptor NDR94_RS21185 PF07715 TonB-dependent Receptor Plug Domain NDR94_RS21195 PF04542 Sigma-70 region 2 NDR94_RS21195 PF08281 Sigma-70, region 4 NDR94_RS21210 PF02492 CobW/HypB/UreG, nucleotide-binding domain NDR94_RS21210 PF07683 Cobalamin synthesis protein cobW C-terminal domain NDR94_RS21225 PF00360 Phytochrome region NDR94_RS21225 PF08446 PAS fold NDR94_RS21225 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS21225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS21225 PF01590 GAF domain NDR94_RS21230 PF00072 Response regulator receiver domain NDR94_RS21235 PF00512 His Kinase A (phospho-acceptor) domain NDR94_RS21235 PF08448 PAS fold NDR94_RS21235 PF13188 PAS domain NDR94_RS21235 PF00072 Response regulator receiver domain NDR94_RS21235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NDR94_RS21240 PF01126 Heme oxygenase NDR94_RS21245 PF01380 SIS domain NDR94_RS21250 PF00455 DeoR C terminal sensor domain NDR94_RS21250 PF08220 DeoR-like helix-turn-helix domain NDR94_RS21255 PF01810 LysE type translocator NDR94_RS21260 PF00132 Bacterial transferase hexapeptide (six repeats) NDR94_RS21260 PF14602 Hexapeptide repeat of succinyl-transferase NDR94_RS21260 PF12804 MobA-like NTP transferase domain NDR94_RS21265 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NDR94_RS21265 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NDR94_RS21270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NDR94_RS21270 PF02874 ATP synthase alpha/beta family, beta-barrel domain NDR94_RS21275 PF00231 ATP synthase NDR94_RS21280 PF02874 ATP synthase alpha/beta family, beta-barrel domain NDR94_RS21280 PF00306 ATP synthase alpha/beta chain, C terminal domain NDR94_RS21280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NDR94_RS21285 PF00213 ATP synthase delta (OSCP) subunit NDR94_RS21290 PF00430 ATP synthase B/B' CF(0) NDR94_RS21295 PF00137 ATP synthase subunit C NDR94_RS21300 PF00119 ATP synthase A chain NDR94_RS21305 PF03899 ATP synthase I chain NDR94_RS21310 PF17762 HTH domain found in ParB protein NDR94_RS21310 PF02195 ParB-like nuclease domain NDR94_RS21315 PF13614 AAA domain NDR94_RS21320 PF02527 rRNA small subunit methyltransferase G NDR94_RS21325 PF13932 GidA associated domain NDR94_RS21325 PF01134 Glucose inhibited division protein A NDR94_RS21330 PF03334 Na+/H+ antiporter subunit NDR94_RS21345 PF00361 Proton-conducting membrane transporter NDR94_RS21350 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NDR94_RS21355 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NDR94_RS21360 PF13244 Domain of unknown function (DUF4040) NDR94_RS21360 PF00361 Proton-conducting membrane transporter NDR94_RS21360 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NDR94_RS21365 PF01926 50S ribosome-binding GTPase NDR94_RS21365 PF12631 MnmE helical domain NDR94_RS21365 PF10396 GTP-binding protein TrmE N-terminus NDR94_RS21370 PF02096 60Kd inner membrane protein NDR94_RS21370 PF14849 YidC periplasmic domain NDR94_RS21375 PF01809 Putative membrane protein insertion efficiency factor NDR94_RS21380 PF00825 Ribonuclease P NDR94_RS21385 PF00468 Ribosomal protein L34