locus-tag class description LQF05_RS00005 PF00308 Bacterial dnaA protein LQF05_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix LQF05_RS00005 PF11638 DnaA N-terminal domain LQF05_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LQF05_RS00010 PF02767 DNA polymerase III beta subunit, central domain LQF05_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LQF05_RS00015 PF02463 RecF/RecN/SMC N terminal domain LQF05_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS00020 PF18053 DNA gyrase B subunit insert domain LQF05_RS00020 PF01751 Toprim domain LQF05_RS00020 PF00204 DNA gyrase B LQF05_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus LQF05_RS00025 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQF05_RS00025 PF13192 Thioredoxin domain LQF05_RS00030 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS00045 PF05746 DALR anticodon binding domain LQF05_RS00045 PF02092 Glycyl-tRNA synthetase beta subunit LQF05_RS00050 PF02091 Glycyl-tRNA synthetase alpha subunit LQF05_RS00055 PF03352 Methyladenine glycosylase LQF05_RS00075 PF00005 ABC transporter LQF05_RS00080 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS00085 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS00090 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQF05_RS00095 PF02254 TrkA-N domain LQF05_RS00095 PF02080 TrkA-C domain LQF05_RS00100 PF01189 16S rRNA methyltransferase RsmB/F LQF05_RS00100 PF01029 NusB family LQF05_RS00105 PF02911 Formyl transferase, C-terminal domain LQF05_RS00105 PF00551 Formyl transferase LQF05_RS00110 PF01327 Polypeptide deformylase LQF05_RS00120 PF02481 DNA recombination-mediator protein A LQF05_RS00120 PF17782 DprA winged helix domain LQF05_RS00125 PF01300 Telomere recombination LQF05_RS00130 PF00107 Zinc-binding dehydrogenase LQF05_RS00130 PF08240 Alcohol dehydrogenase GroES-like domain LQF05_RS00135 PF01218 Coproporphyrinogen III oxidase LQF05_RS00140 PF08501 Shikimate dehydrogenase substrate binding domain LQF05_RS00140 PF01488 Shikimate / quinate 5-dehydrogenase LQF05_RS00140 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LQF05_RS00155 PF00768 D-alanyl-D-alanine carboxypeptidase LQF05_RS00190 PF03180 NLPA lipoprotein LQF05_RS00195 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS00200 PF00005 ABC transporter LQF05_RS00200 PF09383 NIL domain LQF05_RS00205 PF00199 Catalase LQF05_RS00205 PF06628 Catalase-related immune-responsive LQF05_RS00205 PF18011 C-terminal domain found in long catalases LQF05_RS00210 PF01863 Protein of unknown function DUF45 LQF05_RS00215 PF00950 ABC 3 transport family LQF05_RS00220 PF00005 ABC transporter LQF05_RS00225 PF01475 Ferric uptake regulator family LQF05_RS00230 PF01297 Zinc-uptake complex component A periplasmic LQF05_RS00235 PF00202 Aminotransferase class-III LQF05_RS00240 PF00171 Aldehyde dehydrogenase family LQF05_RS00245 PF00535 Glycosyl transferase family 2 LQF05_RS00260 PF00072 Response regulator receiver domain LQF05_RS00260 PF00486 Transcriptional regulatory protein, C terminal LQF05_RS00265 PF00989 PAS fold LQF05_RS00265 PF00672 HAMP domain LQF05_RS00265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS00265 PF18698 Histidine kinase sensor domain LQF05_RS00265 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS00270 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS00270 PF00072 Response regulator receiver domain LQF05_RS00275 PF00072 Response regulator receiver domain LQF05_RS00275 PF00486 Transcriptional regulatory protein, C terminal LQF05_RS00280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS00280 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS00280 PF00989 PAS fold LQF05_RS00280 PF16736 Single Cache-like LQF05_RS00285 PF00072 Response regulator receiver domain LQF05_RS00285 PF00486 Transcriptional regulatory protein, C terminal LQF05_RS00290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS00290 PF00989 PAS fold LQF05_RS00290 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS00300 PF07694 5TMR of 5TMR-LYT LQF05_RS00300 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS00310 PF04371 Porphyromonas-type peptidyl-arginine deiminase LQF05_RS00315 PF00795 Carbon-nitrogen hydrolase LQF05_RS00325 PF00120 Glutamine synthetase, catalytic domain LQF05_RS00330 PF07722 Peptidase C26 LQF05_RS00335 PF00120 Glutamine synthetase, catalytic domain LQF05_RS00340 PF00202 Aminotransferase class-III LQF05_RS00345 PF13416 Bacterial extracellular solute-binding protein LQF05_RS00355 PF13416 Bacterial extracellular solute-binding protein LQF05_RS00360 PF08402 TOBE domain LQF05_RS00360 PF00005 ABC transporter LQF05_RS00365 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS00370 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS00395 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LQF05_RS00400 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LQF05_RS00405 PF03480 Bacterial extracellular solute-binding protein, family 7 LQF05_RS00410 PF00158 Sigma-54 interaction domain LQF05_RS00410 PF02954 Bacterial regulatory protein, Fis family LQF05_RS00410 PF00072 Response regulator receiver domain LQF05_RS00415 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS00415 PF02743 Cache domain LQF05_RS00415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS00420 PF04321 RmlD substrate binding domain LQF05_RS00425 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LQF05_RS00430 PF00483 Nucleotidyl transferase LQF05_RS00435 PF16363 GDP-mannose 4,6 dehydratase LQF05_RS00445 PF00005 ABC transporter LQF05_RS00450 PF13533 Biotin-lipoyl like LQF05_RS00465 PF00005 ABC transporter LQF05_RS00470 PF02405 Permease MlaE LQF05_RS00475 PF00199 Catalase LQF05_RS00495 PF00182 Chitinase class I LQF05_RS00500 PF04717 Type VI secretion system, phage-baseplate injector LQF05_RS00505 PF00072 Response regulator receiver domain LQF05_RS00505 PF00158 Sigma-54 interaction domain LQF05_RS00505 PF02954 Bacterial regulatory protein, Fis family LQF05_RS00510 PF00004 ATPase family associated with various cellular activities (AAA) LQF05_RS00510 PF10431 C-terminal, D2-small domain, of ClpB protein LQF05_RS00510 PF07724 AAA domain (Cdc48 subfamily) LQF05_RS00510 PF17871 AAA lid domain LQF05_RS00520 PF05947 Type VI secretion system, TssF LQF05_RS00545 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LQF05_RS00560 PF01263 Aldose 1-epimerase LQF05_RS00565 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS00570 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS00575 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQF05_RS00580 PF00005 ABC transporter LQF05_RS00585 PF02028 BCCT, betaine/carnitine/choline family transporter LQF05_RS00595 PF00565 Staphylococcal nuclease homologue LQF05_RS00605 PF04362 Bacterial Fe(2+) trafficking LQF05_RS00610 PF00633 Helix-hairpin-helix motif LQF05_RS00610 PF10576 Iron-sulfur binding domain of endonuclease III LQF05_RS00610 PF14815 NUDIX domain LQF05_RS00610 PF00730 HhH-GPD superfamily base excision DNA repair protein LQF05_RS00625 PF00005 ABC transporter LQF05_RS00630 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS00640 PF03861 ANTAR domain LQF05_RS00640 PF08376 Nitrate and nitrite sensing LQF05_RS00645 PF00475 Imidazoleglycerol-phosphate dehydratase LQF05_RS00650 PF00117 Glutamine amidotransferase class-I LQF05_RS00660 PF00977 Histidine biosynthesis protein LQF05_RS00665 PF00977 Histidine biosynthesis protein LQF05_RS00680 PF04748 Divergent polysaccharide deacetylase LQF05_RS00685 PF13180 PDZ domain LQF05_RS00685 PF03572 Peptidase family S41 LQF05_RS00690 PF01551 Peptidase family M23 LQF05_RS00695 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LQF05_RS00695 PF01676 Metalloenzyme superfamily LQF05_RS00700 PF00581 Rhodanese-like domain LQF05_RS00705 PF00462 Glutaredoxin LQF05_RS00710 PF02556 Preprotein translocase subunit SecB LQF05_RS00715 PF00107 Zinc-binding dehydrogenase LQF05_RS00715 PF08240 Alcohol dehydrogenase GroES-like domain LQF05_RS00735 PF01812 5-formyltetrahydrofolate cyclo-ligase family LQF05_RS00745 PF05164 Cell division protein ZapA LQF05_RS00755 PF03695 Uncharacterised protein family (UPF0149) LQF05_RS00760 PF05195 Aminopeptidase P, N-terminal domain LQF05_RS00760 PF00557 Metallopeptidase family M24 LQF05_RS00765 PF01494 FAD binding domain LQF05_RS00775 PF01494 FAD binding domain LQF05_RS00785 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS00790 PF08669 Glycine cleavage T-protein C-terminal barrel domain LQF05_RS00790 PF01571 Aminomethyltransferase folate-binding domain LQF05_RS00795 PF01597 Glycine cleavage H-protein LQF05_RS00800 PF02347 Glycine cleavage system P-protein LQF05_RS00805 PF01926 50S ribosome-binding GTPase LQF05_RS00810 PF00034 Cytochrome c LQF05_RS00815 PF01323 DSBA-like thioredoxin domain LQF05_RS00825 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS00830 PF01510 N-acetylmuramoyl-L-alanine amidase LQF05_RS00840 PF00672 HAMP domain LQF05_RS00840 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS00840 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB LQF05_RS00840 PF08448 PAS fold LQF05_RS00840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS00845 PF02954 Bacterial regulatory protein, Fis family LQF05_RS00845 PF00158 Sigma-54 interaction domain LQF05_RS00845 PF00072 Response regulator receiver domain LQF05_RS00865 PF07670 Nucleoside recognition LQF05_RS00875 PF16868 NMT1-like family LQF05_RS00880 PF00672 HAMP domain LQF05_RS00880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS00880 PF17200 Single Cache domain 2 LQF05_RS00890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS00890 PF08447 PAS fold LQF05_RS00895 PF00563 EAL domain LQF05_RS00895 PF01590 GAF domain LQF05_RS00895 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS00895 PF00360 Phytochrome region LQF05_RS00900 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS00900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS00905 PF00072 Response regulator receiver domain LQF05_RS00905 PF00486 Transcriptional regulatory protein, C terminal LQF05_RS00910 PF03573 outer membrane porin, OprD family LQF05_RS00925 PF01970 Tripartite tricarboxylate transporter TctA family LQF05_RS00930 PF05145 Transition state regulatory protein AbrB LQF05_RS00935 PF02690 Na+/Pi-cotransporter LQF05_RS00945 PF17946 RecC C-terminal domain LQF05_RS00950 PF12705 PD-(D/E)XK nuclease superfamily LQF05_RS00950 PF13361 UvrD-like helicase C-terminal domain LQF05_RS00950 PF00580 UvrD/REP helicase N-terminal domain LQF05_RS00955 PF13538 UvrD-like helicase C-terminal domain LQF05_RS00970 PF00563 EAL domain LQF05_RS00970 PF01590 GAF domain LQF05_RS00970 PF00360 Phytochrome region LQF05_RS00970 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS00975 PF03061 Thioesterase superfamily LQF05_RS00980 PF12849 PBP superfamily domain LQF05_RS00985 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS00990 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS00995 PF00005 ABC transporter LQF05_RS01000 PF01895 PhoU domain LQF05_RS01005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS01005 PF03466 LysR substrate binding domain LQF05_RS01015 PF12631 MnmE helical domain LQF05_RS01015 PF01926 50S ribosome-binding GTPase LQF05_RS01015 PF10396 GTP-binding protein TrmE N-terminus LQF05_RS01025 PF03009 Glycerophosphoryl diester phosphodiesterase family LQF05_RS01030 PF00186 Dihydrofolate reductase LQF05_RS01055 PF00920 Dehydratase family LQF05_RS01065 PF10672 S-adenosylmethionine-dependent methyltransferase LQF05_RS01065 PF17785 PUA-like domain LQF05_RS01070 PF01965 DJ-1/PfpI family LQF05_RS01080 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LQF05_RS01080 PF06827 Zinc finger found in FPG and IleRS LQF05_RS01080 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LQF05_RS01100 PF00037 4Fe-4S binding domain LQF05_RS01105 PF01467 Cytidylyltransferase-like LQF05_RS01110 PF05199 GMC oxidoreductase LQF05_RS01110 PF00732 GMC oxidoreductase LQF05_RS01120 PF00171 Aldehyde dehydrogenase family LQF05_RS01125 PF00440 Bacterial regulatory proteins, tetR family LQF05_RS01145 PF05193 Peptidase M16 inactive domain LQF05_RS01150 PF00675 Insulinase (Peptidase family M16) LQF05_RS01150 PF05193 Peptidase M16 inactive domain LQF05_RS01155 PF02881 SRP54-type protein, helical bundle domain LQF05_RS01155 PF00448 SRP54-type protein, GTPase domain LQF05_RS01160 PF00005 ABC transporter LQF05_RS01165 PF18075 FtsX extracellular domain LQF05_RS01170 PF04542 Sigma-70 region 2 LQF05_RS01170 PF04545 Sigma-70, region 4 LQF05_RS01170 PF00140 Sigma-70 factor, region 1.2 LQF05_RS01175 PF01627 Hpt domain LQF05_RS01175 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS01175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS01175 PF00672 HAMP domain LQF05_RS01175 PF17149 Periplasmic sensor domain found in signal transduction proteins LQF05_RS01175 PF00072 Response regulator receiver domain LQF05_RS01180 PF00563 EAL domain LQF05_RS01180 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS01180 PF03707 Bacterial signalling protein N terminal repeat LQF05_RS01185 PF00912 Transglycosylase LQF05_RS01190 PF04241 Protein of unknown function (DUF423) LQF05_RS01195 PF02597 ThiS family LQF05_RS01195 PF05690 Thiazole biosynthesis protein ThiG LQF05_RS01200 PF05690 Thiazole biosynthesis protein ThiG LQF05_RS01205 PF02390 Putative methyltransferase LQF05_RS01210 PF07044 Protein of unknown function (DUF1329) LQF05_RS01215 PF00696 Amino acid kinase family LQF05_RS01220 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LQF05_RS01220 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LQF05_RS01230 PF13520 Amino acid permease LQF05_RS01245 PF06969 HemN C-terminal domain LQF05_RS01245 PF04055 Radical SAM superfamily LQF05_RS01250 PF01725 Ham1 family LQF05_RS01260 PF07021 Methionine biosynthesis protein MetW LQF05_RS01260 PF00561 alpha/beta hydrolase fold LQF05_RS01265 PF00561 alpha/beta hydrolase fold LQF05_RS01275 PF02325 YGGT family LQF05_RS01280 PF14748 Pyrroline-5-carboxylate reductase dimerisation LQF05_RS01280 PF03807 NADP oxidoreductase coenzyme F420-dependent LQF05_RS01285 PF01168 Alanine racemase, N-terminal domain LQF05_RS01290 PF00437 Type II/IV secretion system protein LQF05_RS01295 PF00437 Type II/IV secretion system protein LQF05_RS01315 PF01979 Amidohydrolase family LQF05_RS01320 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LQF05_RS01320 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LQF05_RS01325 PF00156 Phosphoribosyl transferase domain LQF05_RS01330 PF03652 Holliday junction resolvase LQF05_RS01335 PF02622 Uncharacterized ACR, COG1678 LQF05_RS01345 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LQF05_RS01345 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LQF05_RS01350 PF00072 Response regulator receiver domain LQF05_RS01355 PF00072 Response regulator receiver domain LQF05_RS01360 PF01584 CheW-like domain LQF05_RS01365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS01365 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LQF05_RS01370 PF01739 CheR methyltransferase, SAM binding domain LQF05_RS01370 PF03705 CheR methyltransferase, all-alpha domain LQF05_RS01375 PF01584 CheW-like domain LQF05_RS01375 PF02895 Signal transducing histidine kinase, homodimeric domain LQF05_RS01375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS01375 PF01627 Hpt domain LQF05_RS01375 PF00072 Response regulator receiver domain LQF05_RS01380 PF01339 CheB methylesterase LQF05_RS01380 PF00072 Response regulator receiver domain LQF05_RS01390 PF04452 RNA methyltransferase LQF05_RS01395 PF00202 Aminotransferase class-III LQF05_RS01400 PF01292 Prokaryotic cytochrome b561 LQF05_RS01405 PF04264 YceI-like domain LQF05_RS01410 PF00529 HlyD membrane-fusion protein of T1SS LQF05_RS01410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQF05_RS01415 PF00873 AcrB/AcrD/AcrF family LQF05_RS01420 PF02321 Outer membrane efflux protein LQF05_RS01420 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LQF05_RS01425 PF00270 DEAD/DEAH box helicase LQF05_RS01425 PF00271 Helicase conserved C-terminal domain LQF05_RS01430 PF02219 Methylenetetrahydrofolate reductase LQF05_RS01435 PF05221 S-adenosyl-L-homocysteine hydrolase LQF05_RS01435 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LQF05_RS01455 PF01653 NAD-dependent DNA ligase adenylation domain LQF05_RS01455 PF03120 NAD-dependent DNA ligase OB-fold domain LQF05_RS01460 PF00970 Oxidoreductase FAD-binding domain LQF05_RS01460 PF00111 2Fe-2S iron-sulfur cluster binding domain LQF05_RS01460 PF00175 Oxidoreductase NAD-binding domain LQF05_RS01465 PF00005 ABC transporter LQF05_RS01470 PF01061 ABC-2 type transporter LQF05_RS01480 PF02773 S-adenosylmethionine synthetase, C-terminal domain LQF05_RS01480 PF02772 S-adenosylmethionine synthetase, central domain LQF05_RS01480 PF00438 S-adenosylmethionine synthetase, N-terminal domain LQF05_RS01485 PF13649 Methyltransferase domain LQF05_RS01495 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LQF05_RS01500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS01500 PF03466 LysR substrate binding domain LQF05_RS01505 PF02780 Transketolase, C-terminal domain LQF05_RS01505 PF00456 Transketolase, thiamine diphosphate binding domain LQF05_RS01505 PF02779 Transketolase, pyrimidine binding domain LQF05_RS01510 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LQF05_RS01510 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LQF05_RS01515 PF00162 Phosphoglycerate kinase LQF05_RS01530 PF01116 Fructose-bisphosphate aldolase class-II LQF05_RS01535 PF03861 ANTAR domain LQF05_RS01535 PF00072 Response regulator receiver domain LQF05_RS01540 PF09313 Domain of unknown function (DUF1971) LQF05_RS01540 PF03848 Tellurite resistance protein TehB LQF05_RS01555 PF00563 EAL domain LQF05_RS01555 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS01555 PF03707 Bacterial signalling protein N terminal repeat LQF05_RS01580 PF12805 FUSC-like inner membrane protein yccS LQF05_RS01585 PF03880 DbpA RNA binding domain LQF05_RS01585 PF00271 Helicase conserved C-terminal domain LQF05_RS01585 PF00270 DEAD/DEAH box helicase LQF05_RS01600 PF00474 Sodium:solute symporter family LQF05_RS01620 PF01274 Malate synthase LQF05_RS01630 PF00892 EamA-like transporter family LQF05_RS01640 PF01204 Trehalase LQF05_RS01645 PF07729 FCD domain LQF05_RS01645 PF00392 Bacterial regulatory proteins, gntR family LQF05_RS01655 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LQF05_RS01665 PF03480 Bacterial extracellular solute-binding protein, family 7 LQF05_RS01670 PF08450 SMP-30/Gluconolactonase/LRE-like region LQF05_RS01675 PF01370 NAD dependent epimerase/dehydratase family LQF05_RS01680 PF00356 Bacterial regulatory proteins, lacI family LQF05_RS01695 PF02311 AraC-like ligand binding domain LQF05_RS01695 PF12833 Helix-turn-helix domain LQF05_RS01705 PF13378 Enolase C-terminal domain-like LQF05_RS01705 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LQF05_RS01710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS01710 PF03466 LysR substrate binding domain LQF05_RS01715 PF13378 Enolase C-terminal domain-like LQF05_RS01715 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LQF05_RS01720 PF01970 Tripartite tricarboxylate transporter TctA family LQF05_RS01735 PF13378 Enolase C-terminal domain-like LQF05_RS01735 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LQF05_RS01740 PF00701 Dihydrodipicolinate synthetase family LQF05_RS01745 PF00171 Aldehyde dehydrogenase family LQF05_RS01750 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LQF05_RS01750 PF13378 Enolase C-terminal domain-like LQF05_RS01755 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LQF05_RS01755 PF08666 SAF domain LQF05_RS01770 PF07715 TonB-dependent Receptor Plug Domain LQF05_RS01770 PF00593 TonB dependent receptor LQF05_RS01790 PF03573 outer membrane porin, OprD family LQF05_RS01800 PF01145 SPFH domain / Band 7 family LQF05_RS01800 PF16200 C-terminal region of band_7 LQF05_RS01810 PF00753 Metallo-beta-lactamase superfamily LQF05_RS01820 PF00106 short chain dehydrogenase LQF05_RS01825 PF01679 Proteolipid membrane potential modulator LQF05_RS01830 PF00072 Response regulator receiver domain LQF05_RS01830 PF01627 Hpt domain LQF05_RS01830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS01830 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS01835 PF01739 CheR methyltransferase, SAM binding domain LQF05_RS01835 PF03705 CheR methyltransferase, all-alpha domain LQF05_RS01840 PF01339 CheB methylesterase LQF05_RS01845 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS01845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS01845 PF16736 Single Cache-like LQF05_RS01845 PF00989 PAS fold LQF05_RS01850 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LQF05_RS01855 PF12795 Mechanosensitive ion channel porin domain LQF05_RS01855 PF12794 Mechanosensitive ion channel inner membrane domain 1 LQF05_RS01855 PF00924 Mechanosensitive ion channel LQF05_RS01860 PF00999 Sodium/hydrogen exchanger family LQF05_RS01860 PF02080 TrkA-C domain LQF05_RS01860 PF03471 Transporter associated domain LQF05_RS01865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQF05_RS01865 PF12806 Acetyl-CoA dehydrogenase C-terminal like LQF05_RS01865 PF02770 Acyl-CoA dehydrogenase, middle domain LQF05_RS01865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQF05_RS01870 PF00348 Polyprenyl synthetase LQF05_RS01875 PF01070 FMN-dependent dehydrogenase LQF05_RS01880 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LQF05_RS01890 PF01593 Flavin containing amine oxidoreductase LQF05_RS01900 PF04116 Fatty acid hydroxylase superfamily LQF05_RS01905 PF03060 Nitronate monooxygenase LQF05_RS01910 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LQF05_RS01915 PF01636 Phosphotransferase enzyme family LQF05_RS01920 PF00156 Phosphoribosyl transferase domain LQF05_RS01925 PF04055 Radical SAM superfamily LQF05_RS01925 PF06968 Biotin and Thiamin Synthesis associated domain LQF05_RS01930 PF00155 Aminotransferase class I and II LQF05_RS01935 PF08241 Methyltransferase domain LQF05_RS01935 PF12697 Alpha/beta hydrolase family LQF05_RS01940 PF08241 Methyltransferase domain LQF05_RS01955 PF12806 Acetyl-CoA dehydrogenase C-terminal like LQF05_RS01955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQF05_RS01955 PF02770 Acyl-CoA dehydrogenase, middle domain LQF05_RS01955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQF05_RS01960 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS01965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQF05_RS01965 PF02770 Acyl-CoA dehydrogenase, middle domain LQF05_RS01965 PF12806 Acetyl-CoA dehydrogenase C-terminal like LQF05_RS01965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQF05_RS01970 PF01625 Peptide methionine sulfoxide reductase LQF05_RS01975 PF00563 EAL domain LQF05_RS01975 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS01975 PF03707 Bacterial signalling protein N terminal repeat LQF05_RS01985 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LQF05_RS01985 PF02817 e3 binding domain LQF05_RS01985 PF00364 Biotin-requiring enzyme LQF05_RS01990 PF00456 Transketolase, thiamine diphosphate binding domain LQF05_RS01990 PF17831 Pyruvate dehydrogenase E1 component middle domain LQF05_RS01995 PF08335 GlnD PII-uridylyltransferase LQF05_RS01995 PF03710 Glutamate-ammonia ligase adenylyltransferase LQF05_RS02000 PF01063 Amino-transferase class IV LQF05_RS02005 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LQF05_RS02010 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LQF05_RS02015 PF13439 Glycosyltransferase Family 4 LQF05_RS02015 PF00534 Glycosyl transferases group 1 LQF05_RS02040 PF16861 Carbamoyltransferase C-terminus LQF05_RS02040 PF02543 Carbamoyltransferase N-terminus LQF05_RS02045 PF13439 Glycosyltransferase Family 4 LQF05_RS02045 PF00534 Glycosyl transferases group 1 LQF05_RS02080 PF00005 ABC transporter LQF05_RS02080 PF00664 ABC transporter transmembrane region LQF05_RS02095 PF01467 Cytidylyltransferase-like LQF05_RS02095 PF00294 pfkB family carbohydrate kinase LQF05_RS02105 PF00248 Aldo/keto reductase family LQF05_RS02110 PF01266 FAD dependent oxidoreductase LQF05_RS02115 PF00893 Small Multidrug Resistance protein LQF05_RS02120 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LQF05_RS02125 PF02321 Outer membrane efflux protein LQF05_RS02130 PF01964 Radical SAM ThiC family LQF05_RS02130 PF13667 ThiC-associated domain LQF05_RS02140 PF00293 NUDIX domain LQF05_RS02150 PF00149 Calcineurin-like phosphoesterase LQF05_RS02155 PF05728 Uncharacterised protein family (UPF0227) LQF05_RS02160 PF00204 DNA gyrase B LQF05_RS02160 PF00986 DNA gyrase B subunit, carboxyl terminus LQF05_RS02160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS02160 PF01751 Toprim domain LQF05_RS02175 PF03989 DNA gyrase C-terminal domain, beta-propeller LQF05_RS02175 PF00521 DNA gyrase/topoisomerase IV, subunit A LQF05_RS02195 PF00107 Zinc-binding dehydrogenase LQF05_RS02195 PF08240 Alcohol dehydrogenase GroES-like domain LQF05_RS02200 PF00563 EAL domain LQF05_RS02200 PF05231 MASE1 LQF05_RS02210 PF02666 Phosphatidylserine decarboxylase LQF05_RS02215 PF00581 Rhodanese-like domain LQF05_RS02225 PF01618 MotA/TolQ/ExbB proton channel family LQF05_RS02230 PF13677 Membrane MotB of proton-channel complex MotA/MotB LQF05_RS02230 PF00691 OmpA family LQF05_RS02235 PF03193 RsgA GTPase LQF05_RS02245 PF00929 Exonuclease LQF05_RS02250 PF13460 NAD(P)H-binding LQF05_RS02260 PF01575 MaoC like domain LQF05_RS02265 PF03788 LrgA family LQF05_RS02270 PF04172 LrgB-like family LQF05_RS02280 PF09335 SNARE associated Golgi protein LQF05_RS02285 PF00171 Aldehyde dehydrogenase family LQF05_RS02290 PF01467 Cytidylyltransferase-like LQF05_RS02300 PF02590 Predicted SPOUT methyltransferase LQF05_RS02305 PF03717 Penicillin-binding Protein dimerisation domain LQF05_RS02305 PF00905 Penicillin binding protein transpeptidase domain LQF05_RS02310 PF01098 Cell cycle protein LQF05_RS02315 PF13406 Transglycosylase SLT domain LQF05_RS02320 PF03330 Lytic transglycolase LQF05_RS02320 PF05036 Sporulation related domain LQF05_RS02325 PF07943 Penicillin-binding protein 5, C-terminal domain LQF05_RS02325 PF00768 D-alanyl-D-alanine carboxypeptidase LQF05_RS02330 PF04359 Protein of unknown function (DUF493) LQF05_RS02335 PF03099 Biotin/lipoate A/B protein ligase family LQF05_RS02340 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LQF05_RS02340 PF04055 Radical SAM superfamily LQF05_RS02350 PF13406 Transglycosylase SLT domain LQF05_RS02355 PF03889 Alternative ribosome-rescue factor A LQF05_RS02370 PF09334 tRNA synthetases class I (M) LQF05_RS02370 PF00133 tRNA synthetases class I (I, L, M and V) LQF05_RS02370 PF08264 Anticodon-binding domain of tRNA LQF05_RS02370 PF13603 Leucyl-tRNA synthetase, Domain 2 LQF05_RS02385 PF00795 Carbon-nitrogen hydrolase LQF05_RS02390 PF00571 CBS domain LQF05_RS02390 PF03471 Transporter associated domain LQF05_RS02395 PF02130 Uncharacterized protein family UPF0054 LQF05_RS02400 PF02562 PhoH-like protein LQF05_RS02405 PF04055 Radical SAM superfamily LQF05_RS02405 PF01938 TRAM domain LQF05_RS02405 PF00919 Uncharacterized protein family UPF0004 LQF05_RS02420 PF00202 Aminotransferase class-III LQF05_RS02425 PF02581 Thiamine monophosphate synthase LQF05_RS02430 PF08543 Phosphomethylpyrimidine kinase LQF05_RS02430 PF02581 Thiamine monophosphate synthase LQF05_RS02435 PF00672 HAMP domain LQF05_RS02435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS02435 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS02435 PF01627 Hpt domain LQF05_RS02435 PF00072 Response regulator receiver domain LQF05_RS02435 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LQF05_RS02440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQF05_RS02440 PF02770 Acyl-CoA dehydrogenase, middle domain LQF05_RS02440 PF18158 Adaptive response protein AidB N-terminal domain LQF05_RS02450 PF00585 C-terminal regulatory domain of Threonine dehydratase LQF05_RS02450 PF00291 Pyridoxal-phosphate dependent enzyme LQF05_RS02455 PF00155 Aminotransferase class I and II LQF05_RS02455 PF00392 Bacterial regulatory proteins, gntR family LQF05_RS02460 PF01048 Phosphorylase superfamily LQF05_RS02460 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus LQF05_RS02470 PF04955 HupE / UreJ protein LQF05_RS02475 PF02492 CobW/HypB/UreG, nucleotide-binding domain LQF05_RS02480 PF01730 UreF LQF05_RS02485 PF05194 UreE urease accessory protein, C-terminal domain LQF05_RS02485 PF02814 UreE urease accessory protein, N-terminal domain LQF05_RS02505 PF07690 Major Facilitator Superfamily LQF05_RS02515 PF01258 Prokaryotic dksA/traR C4-type zinc finger LQF05_RS02520 PF08446 PAS fold LQF05_RS02520 PF00360 Phytochrome region LQF05_RS02520 PF01590 GAF domain LQF05_RS02520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS02520 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS02525 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LQF05_RS02530 PF01979 Amidohydrolase family LQF05_RS02530 PF00449 Urease alpha-subunit, N-terminal domain LQF05_RS02535 PF00699 Urease beta subunit LQF05_RS02545 PF00547 Urease, gamma subunit LQF05_RS02550 PF01774 UreD urease accessory protein LQF05_RS02555 PF00689 Cation transporting ATPase, C-terminus LQF05_RS02555 PF00690 Cation transporter/ATPase, N-terminus LQF05_RS02560 PF00005 ABC transporter LQF05_RS02565 PF00005 ABC transporter LQF05_RS02565 PF12399 Branched-chain amino acid ATP-binding cassette transporter LQF05_RS02570 PF02653 Branched-chain amino acid transport system / permease component LQF05_RS02575 PF02653 Branched-chain amino acid transport system / permease component LQF05_RS02585 PF00849 RNA pseudouridylate synthase LQF05_RS02600 PF13404 AsnC-type helix-turn-helix domain LQF05_RS02600 PF01037 Lrp/AsnC ligand binding domain LQF05_RS02605 PF16916 Dimerisation domain of Zinc Transporter LQF05_RS02605 PF01545 Cation efflux family LQF05_RS02620 PF08482 ATP-dependent helicase C-terminal LQF05_RS02620 PF00270 DEAD/DEAH box helicase LQF05_RS02620 PF00271 Helicase conserved C-terminal domain LQF05_RS02620 PF04408 Helicase associated domain (HA2) LQF05_RS02630 PF00106 short chain dehydrogenase LQF05_RS02650 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LQF05_RS02650 PF02779 Transketolase, pyrimidine binding domain LQF05_RS02650 PF02780 Transketolase, C-terminal domain LQF05_RS02655 PF00348 Polyprenyl synthetase LQF05_RS02660 PF02609 Exonuclease VII small subunit LQF05_RS02670 PF06276 Ferric iron reductase FhuF-like transporter LQF05_RS02670 PF04183 IucA / IucC family LQF05_RS02685 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LQF05_RS02690 PF00282 Pyridoxal-dependent decarboxylase conserved domain LQF05_RS02700 PF00563 EAL domain LQF05_RS02700 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS02700 PF03707 Bacterial signalling protein N terminal repeat LQF05_RS02700 PF13188 PAS domain LQF05_RS02710 PF01339 CheB methylesterase LQF05_RS02710 PF00072 Response regulator receiver domain LQF05_RS02715 PF03705 CheR methyltransferase, all-alpha domain LQF05_RS02715 PF01739 CheR methyltransferase, SAM binding domain LQF05_RS02720 PF01584 CheW-like domain LQF05_RS02725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS02725 PF00672 HAMP domain LQF05_RS02725 PF12729 Four helix bundle sensory module for signal transduction LQF05_RS02730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS02730 PF02895 Signal transducing histidine kinase, homodimeric domain LQF05_RS02730 PF01584 CheW-like domain LQF05_RS02730 PF01627 Hpt domain LQF05_RS02740 PF00072 Response regulator receiver domain LQF05_RS02745 PF13426 PAS domain LQF05_RS02745 PF08447 PAS fold LQF05_RS02745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS02750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS02750 PF07730 Histidine kinase LQF05_RS02750 PF05231 MASE1 LQF05_RS02755 PF00196 Bacterial regulatory proteins, luxR family LQF05_RS02755 PF00072 Response regulator receiver domain LQF05_RS02765 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS02770 PF00719 Inorganic pyrophosphatase LQF05_RS02775 PF06167 Glucose-regulated metallo-peptidase M90 LQF05_RS02785 PF09423 PhoD-like phosphatase LQF05_RS02785 PF16655 PhoD-like phosphatase, N-terminal domain LQF05_RS02790 PF05985 Ethanolamine ammonia-lyase light chain (EutC) LQF05_RS02800 PF06751 Ethanolamine ammonia lyase large subunit (EutB) LQF05_RS02805 PF13520 Amino acid permease LQF05_RS02810 PF00171 Aldehyde dehydrogenase family LQF05_RS02815 PF01225 Mur ligase family, catalytic domain LQF05_RS02815 PF02875 Mur ligase family, glutamate ligase domain LQF05_RS02815 PF08245 Mur ligase middle domain LQF05_RS02820 PF02441 Flavoprotein LQF05_RS02830 PF00004 ATPase family associated with various cellular activities (AAA) LQF05_RS02830 PF17862 AAA+ lid domain LQF05_RS02830 PF06480 FtsH Extracellular LQF05_RS02830 PF01434 Peptidase family M41 LQF05_RS02835 PF08331 Domain of unknown function (DUF1730) LQF05_RS02840 PF01256 Carbohydrate kinase LQF05_RS02840 PF03853 YjeF-related protein N-terminus LQF05_RS02845 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LQF05_RS02850 PF01520 N-acetylmuramoyl-L-alanine amidase LQF05_RS02850 PF11741 AMIN domain LQF05_RS02855 PF08676 MutL C terminal dimerisation domain LQF05_RS02855 PF01119 DNA mismatch repair protein, C-terminal domain LQF05_RS02865 PF17209 Hfq protein LQF05_RS02870 PF16360 GTP-binding GTPase Middle Region LQF05_RS02870 PF13167 GTP-binding GTPase N-terminal LQF05_RS02870 PF01926 50S ribosome-binding GTPase LQF05_RS02875 PF01145 SPFH domain / Band 7 family LQF05_RS02875 PF12221 Bacterial membrane protein N terminal LQF05_RS02880 PF01145 SPFH domain / Band 7 family LQF05_RS02885 PF13393 Histidyl-tRNA synthetase LQF05_RS02890 PF00709 Adenylosuccinate synthetase LQF05_RS02905 PF08206 Ribonuclease B OB domain LQF05_RS02905 PF17876 Cold shock domain LQF05_RS02905 PF08461 Ribonuclease R winged-helix domain LQF05_RS02905 PF00773 RNB domain LQF05_RS02905 PF00575 S1 RNA binding domain LQF05_RS02910 PF08032 RNA 2'-O ribose methyltransferase substrate binding LQF05_RS02910 PF00588 SpoU rRNA Methylase family LQF05_RS02915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS02915 PF13426 PAS domain LQF05_RS02915 PF00072 Response regulator receiver domain LQF05_RS02920 PF01250 Ribosomal protein S6 LQF05_RS02925 PF01084 Ribosomal protein S18 LQF05_RS02935 PF03948 Ribosomal protein L9, C-terminal domain LQF05_RS02935 PF01281 Ribosomal protein L9, N-terminal domain LQF05_RS02940 PF00772 DnaB-like helicase N terminal domain LQF05_RS02940 PF03796 DnaB-like helicase C terminal domain LQF05_RS02945 PF00842 Alanine racemase, C-terminal domain LQF05_RS02945 PF01168 Alanine racemase, N-terminal domain LQF05_RS02950 PF13188 PAS domain LQF05_RS02950 PF03707 Bacterial signalling protein N terminal repeat LQF05_RS02950 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS02950 PF00563 EAL domain LQF05_RS02955 PF11842 Domain of unknown function (DUF3362) LQF05_RS02955 PF04055 Radical SAM superfamily LQF05_RS02955 PF08497 Radical SAM N-terminal LQF05_RS02960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS02965 PF00072 Response regulator receiver domain LQF05_RS02965 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS02975 PF00072 Response regulator receiver domain LQF05_RS02975 PF02954 Bacterial regulatory protein, Fis family LQF05_RS02975 PF00158 Sigma-54 interaction domain LQF05_RS02980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS02980 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS02990 PF13525 Outer membrane lipoprotein LQF05_RS02995 PF00849 RNA pseudouridylate synthase LQF05_RS02995 PF01479 S4 domain LQF05_RS03000 PF02578 Multi-copper polyphenol oxidoreductase laccase LQF05_RS03005 PF00004 ATPase family associated with various cellular activities (AAA) LQF05_RS03005 PF10431 C-terminal, D2-small domain, of ClpB protein LQF05_RS03005 PF02861 Clp amino terminal domain, pathogenicity island component LQF05_RS03005 PF17871 AAA lid domain LQF05_RS03005 PF07724 AAA domain (Cdc48 subfamily) LQF05_RS03025 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQF05_RS03040 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LQF05_RS03040 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LQF05_RS03050 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LQF05_RS03055 PF00579 tRNA synthetases class I (W and Y) LQF05_RS03060 PF03969 AFG1-like ATPase LQF05_RS03070 PF04493 Endonuclease V LQF05_RS03075 PF01510 N-acetylmuramoyl-L-alanine amidase LQF05_RS03085 PF00672 HAMP domain LQF05_RS03085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS03085 PF17200 Single Cache domain 2 LQF05_RS03090 PF01026 TatD related DNase LQF05_RS03100 PF12833 Helix-turn-helix domain LQF05_RS03100 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LQF05_RS03100 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LQF05_RS03100 PF02805 Metal binding domain of Ada LQF05_RS03115 PF00873 AcrB/AcrD/AcrF family LQF05_RS03120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQF05_RS03125 PF00210 Ferritin-like domain LQF05_RS03130 PF00672 HAMP domain LQF05_RS03130 PF16591 Helical bimodular sensor domain LQF05_RS03130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS03135 PF00376 MerR family regulatory protein LQF05_RS03135 PF09278 MerR, DNA binding LQF05_RS03140 PF00403 Heavy-metal-associated domain LQF05_RS03150 PF08361 MAATS-type transcriptional repressor, C-terminal region LQF05_RS03150 PF00440 Bacterial regulatory proteins, tetR family LQF05_RS03155 PF07690 Major Facilitator Superfamily LQF05_RS03165 PF00962 Adenosine/AMP deaminase LQF05_RS03170 PF01205 Uncharacterized protein family UPF0029 LQF05_RS03175 PF03860 Domain of Unknown Function (DUF326) LQF05_RS03185 PF07683 Cobalamin synthesis protein cobW C-terminal domain LQF05_RS03185 PF02492 CobW/HypB/UreG, nucleotide-binding domain LQF05_RS03190 PF01258 Prokaryotic dksA/traR C4-type zinc finger LQF05_RS03195 PF01613 Flavin reductase like domain LQF05_RS03200 PF00881 Nitroreductase family LQF05_RS03205 PF00561 alpha/beta hydrolase fold LQF05_RS03210 PF01042 Endoribonuclease L-PSP LQF05_RS03215 PF00857 Isochorismatase family LQF05_RS03220 PF00296 Luciferase-like monooxygenase LQF05_RS03225 PF08362 YcdC-like protein, C-terminal region LQF05_RS03225 PF00440 Bacterial regulatory proteins, tetR family LQF05_RS03245 PF01965 DJ-1/PfpI family LQF05_RS03245 PF12833 Helix-turn-helix domain LQF05_RS03255 PF02627 Carboxymuconolactone decarboxylase family LQF05_RS03265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LQF05_RS03275 PF07995 Glucose / Sorbosone dehydrogenase LQF05_RS03295 PF02608 ABC transporter substrate-binding protein PnrA-like LQF05_RS03300 PF00005 ABC transporter LQF05_RS03310 PF02653 Branched-chain amino acid transport system / permease component LQF05_RS03320 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS03330 PF00313 'Cold-shock' DNA-binding domain LQF05_RS03335 PF03831 PhnA domain LQF05_RS03335 PF08274 PhnA Zinc-Ribbon LQF05_RS03340 PF03061 Thioesterase superfamily LQF05_RS03350 PF07969 Amidohydrolase family LQF05_RS03355 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LQF05_RS03360 PF06628 Catalase-related immune-responsive LQF05_RS03360 PF00199 Catalase LQF05_RS03370 PF02560 Cyanate lyase C-terminal domain LQF05_RS03380 PF00155 Aminotransferase class I and II LQF05_RS03385 PF01329 Pterin 4 alpha carbinolamine dehydratase LQF05_RS03390 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LQF05_RS03395 PF18024 Helix-turn-helix domain LQF05_RS03395 PF00158 Sigma-54 interaction domain LQF05_RS03400 PF08448 PAS fold LQF05_RS03400 PF01739 CheR methyltransferase, SAM binding domain LQF05_RS03400 PF01339 CheB methylesterase LQF05_RS03400 PF03705 CheR methyltransferase, all-alpha domain LQF05_RS03405 PF03313 Serine dehydratase alpha chain LQF05_RS03405 PF03315 Serine dehydratase beta chain LQF05_RS03410 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQF05_RS03415 PF03480 Bacterial extracellular solute-binding protein, family 7 LQF05_RS03420 PF03480 Bacterial extracellular solute-binding protein, family 7 LQF05_RS03425 PF04343 Protein of unknown function, DUF488 LQF05_RS03440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQF05_RS03440 PF02770 Acyl-CoA dehydrogenase, middle domain LQF05_RS03440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQF05_RS03445 PF12801 4Fe-4S binding domain LQF05_RS03445 PF04205 FMN-binding domain LQF05_RS03450 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LQF05_RS03450 PF18764 Nitrous oxide reductase propeller repeat LQF05_RS03450 PF18793 Nitrous oxide reductase propeller repeat 2 LQF05_RS03455 PF05048 Periplasmic copper-binding protein (NosD) LQF05_RS03460 PF00005 ABC transporter LQF05_RS03465 PF12679 ABC-2 family transporter protein LQF05_RS03470 PF05573 NosL LQF05_RS03475 PF02416 mttA/Hcf106 family LQF05_RS03490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS03490 PF00672 HAMP domain LQF05_RS03490 PF12729 Four helix bundle sensory module for signal transduction LQF05_RS03505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS03505 PF03466 LysR substrate binding domain LQF05_RS03515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LQF05_RS03515 PF10414 Sirohaem synthase dimerisation region LQF05_RS03515 PF14824 Sirohaem biosynthesis protein central LQF05_RS03520 PF04055 Radical SAM superfamily LQF05_RS03520 PF13186 Iron-sulfur cluster-binding domain LQF05_RS03525 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LQF05_RS03530 PF00510 Cytochrome c oxidase subunit III LQF05_RS03535 PF07728 AAA domain (dynein-related subfamily) LQF05_RS03535 PF08406 CbbQ/NirQ/NorQ C-terminal LQF05_RS03540 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LQF05_RS03545 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LQF05_RS03550 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LQF05_RS03560 PF17805 AsnC-like ligand binding domain LQF05_RS03565 PF17805 AsnC-like ligand binding domain LQF05_RS03570 PF17805 AsnC-like ligand binding domain LQF05_RS03570 PF13404 AsnC-type helix-turn-helix domain LQF05_RS03575 PF17805 AsnC-like ligand binding domain LQF05_RS03580 PF00034 Cytochrome c LQF05_RS03585 PF00115 Cytochrome C and Quinol oxidase polypeptide I LQF05_RS03590 PF00092 von Willebrand factor type A domain LQF05_RS03610 PF01814 Hemerythrin HHE cation binding domain LQF05_RS03610 PF04405 Domain of Unknown function (DUF542) LQF05_RS03615 PF02954 Bacterial regulatory protein, Fis family LQF05_RS03615 PF00158 Sigma-54 interaction domain LQF05_RS03625 PF01136 Peptidase family U32 LQF05_RS03630 PF01136 Peptidase family U32 LQF05_RS03635 PF02036 SCP-2 sterol transfer family LQF05_RS03640 PF08859 DGC domain LQF05_RS03660 PF04055 Radical SAM superfamily LQF05_RS03680 PF10634 Fe2+ transport protein LQF05_RS03685 PF07690 Major Facilitator Superfamily LQF05_RS03695 PF00920 Dehydratase family LQF05_RS03700 PF02685 Glucokinase LQF05_RS03705 PF01380 SIS domain LQF05_RS03705 PF01418 Helix-turn-helix domain, rpiR family LQF05_RS03710 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LQF05_RS03710 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LQF05_RS03715 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LQF05_RS03720 PF01081 KDPG and KHG aldolase LQF05_RS03725 PF00171 Aldehyde dehydrogenase family LQF05_RS03730 PF00248 Aldo/keto reductase family LQF05_RS03735 PF00893 Small Multidrug Resistance protein LQF05_RS03740 PF07148 Maltose operon periplasmic protein precursor (MalM) LQF05_RS03745 PF02264 LamB porin LQF05_RS03750 PF00128 Alpha amylase, catalytic domain LQF05_RS03750 PF00686 Starch binding domain LQF05_RS03750 PF09081 Domain of unknown function (DUF1921) LQF05_RS03760 PF00128 Alpha amylase, catalytic domain LQF05_RS03765 PF01547 Bacterial extracellular solute-binding protein LQF05_RS03770 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS03770 PF14785 Maltose transport system permease protein MalF P2 domain LQF05_RS03775 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS03780 PF00196 Bacterial regulatory proteins, luxR family LQF05_RS03780 PF17874 MalT-like TPR region LQF05_RS03790 PF13417 Glutathione S-transferase, N-terminal domain LQF05_RS03795 PF14602 Hexapeptide repeat of succinyl-transferase LQF05_RS03795 PF12464 Maltose acetyltransferase LQF05_RS03800 PF00128 Alpha amylase, catalytic domain LQF05_RS03805 PF00005 ABC transporter LQF05_RS03805 PF17912 MalK OB fold domain LQF05_RS03810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS03810 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS03810 PF08448 PAS fold LQF05_RS03810 PF13188 PAS domain LQF05_RS03810 PF00072 Response regulator receiver domain LQF05_RS03815 PF01810 LysE type translocator LQF05_RS03845 PF07929 Plasmid pRiA4b ORF-3-like protein LQF05_RS03860 PF00176 SNF2 family N-terminal domain LQF05_RS03860 PF00271 Helicase conserved C-terminal domain LQF05_RS03875 PF09382 RQC domain LQF05_RS03875 PF16124 RecQ zinc-binding LQF05_RS03875 PF00570 HRDC domain LQF05_RS03875 PF00270 DEAD/DEAH box helicase LQF05_RS03875 PF00271 Helicase conserved C-terminal domain LQF05_RS03900 PF04002 RadC-like JAB domain LQF05_RS03940 PF13356 Arm DNA-binding domain LQF05_RS03940 PF00589 Phage integrase family LQF05_RS03960 PF02589 LUD domain LQF05_RS03965 PF11870 Domain of unknown function (DUF3390) LQF05_RS03965 PF13183 4Fe-4S dicluster domain LQF05_RS03965 PF02589 LUD domain LQF05_RS03970 PF02754 Cysteine-rich domain LQF05_RS03975 PF02652 L-lactate permease LQF05_RS03980 PF07729 FCD domain LQF05_RS03980 PF00392 Bacterial regulatory proteins, gntR family LQF05_RS03985 PF01668 SmpB protein LQF05_RS03990 PF03364 Polyketide cyclase / dehydrase and lipid transport LQF05_RS03995 PF03658 RnfH family Ubiquitin LQF05_RS04000 PF04355 SmpA / OmlA family LQF05_RS04005 PF01475 Ferric uptake regulator family LQF05_RS04010 PF02463 RecF/RecN/SMC N terminal domain LQF05_RS04015 PF01025 GrpE LQF05_RS04020 PF00012 Hsp70 protein LQF05_RS04025 PF00226 DnaJ domain LQF05_RS04025 PF01556 DnaJ C terminal domain LQF05_RS04025 PF00684 DnaJ central domain LQF05_RS04030 PF05173 Dihydrodipicolinate reductase, C-terminus LQF05_RS04030 PF01113 Dihydrodipicolinate reductase, N-terminus LQF05_RS04035 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LQF05_RS04035 PF00117 Glutamine amidotransferase class-I LQF05_RS04040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LQF05_RS04040 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LQF05_RS04040 PF02142 MGS-like domain LQF05_RS04045 PF01272 Transcription elongation factor, GreA/GreB, C-term LQF05_RS04045 PF03449 Transcription elongation factor, N-terminal LQF05_RS04055 PF01985 CRS1 / YhbY (CRM) domain LQF05_RS04060 PF01434 Peptidase family M41 LQF05_RS04060 PF06480 FtsH Extracellular LQF05_RS04060 PF17862 AAA+ lid domain LQF05_RS04060 PF00004 ATPase family associated with various cellular activities (AAA) LQF05_RS04065 PF00809 Pterin binding enzyme LQF05_RS04070 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LQF05_RS04070 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LQF05_RS04070 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LQF05_RS04070 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LQF05_RS04075 PF00121 Triosephosphate isomerase LQF05_RS04080 PF03840 Preprotein translocase SecG subunit LQF05_RS04095 PF17384 RimP C-terminal SH3 domain LQF05_RS04095 PF02576 RimP N-terminal domain LQF05_RS04100 PF08529 NusA N-terminal domain LQF05_RS04100 PF13184 NusA-like KH domain LQF05_RS04105 PF11987 Translation-initiation factor 2 LQF05_RS04105 PF00009 Elongation factor Tu GTP binding domain LQF05_RS04105 PF04760 Translation initiation factor IF-2, N-terminal region LQF05_RS04105 PF08364 Bacterial translation initiation factor IF-2 associated region LQF05_RS04110 PF02033 Ribosome-binding factor A LQF05_RS04115 PF09157 Pseudouridine synthase II TruB, C-terminal LQF05_RS04115 PF16198 tRNA pseudouridylate synthase B C-terminal domain LQF05_RS04115 PF01509 TruB family pseudouridylate synthase (N terminal domain) LQF05_RS04120 PF00312 Ribosomal protein S15 LQF05_RS04125 PF00575 S1 RNA binding domain LQF05_RS04125 PF00013 KH domain LQF05_RS04125 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LQF05_RS04125 PF03725 3' exoribonuclease family, domain 2 LQF05_RS04125 PF01138 3' exoribonuclease family, domain 1 LQF05_RS04130 PF04972 BON domain LQF05_RS04150 PF17785 PUA-like domain LQF05_RS04150 PF10672 S-adenosylmethionine-dependent methyltransferase LQF05_RS04160 PF00342 Phosphoglucose isomerase LQF05_RS04165 PF02261 Aspartate decarboxylase LQF05_RS04170 PF02569 Pantoate-beta-alanine ligase LQF05_RS04175 PF02548 Ketopantoate hydroxymethyltransferase LQF05_RS04180 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LQF05_RS04185 PF12627 Probable RNA and SrmB- binding site of polymerase A LQF05_RS04185 PF12626 Polymerase A arginine-rich C-terminus LQF05_RS04185 PF01743 Poly A polymerase head domain LQF05_RS04190 PF00158 Sigma-54 interaction domain LQF05_RS04190 PF00072 Response regulator receiver domain LQF05_RS04190 PF02954 Bacterial regulatory protein, Fis family LQF05_RS04195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS04195 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS04195 PF00989 PAS fold LQF05_RS04195 PF08447 PAS fold LQF05_RS04205 PF00749 tRNA synthetases class I (E and Q), catalytic domain LQF05_RS04210 PF01258 Prokaryotic dksA/traR C4-type zinc finger LQF05_RS04215 PF00155 Aminotransferase class I and II LQF05_RS04220 PF03749 Sugar fermentation stimulation protein RE domain LQF05_RS04220 PF17746 SfsA N-terminal OB domain LQF05_RS04225 PF04321 RmlD substrate binding domain LQF05_RS04230 PF03547 Membrane transport protein LQF05_RS04245 PF00067 Cytochrome P450 LQF05_RS04250 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS04250 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LQF05_RS04250 PF00072 Response regulator receiver domain LQF05_RS04250 PF01627 Hpt domain LQF05_RS04250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS04250 PF00672 HAMP domain LQF05_RS04255 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LQF05_RS04255 PF02843 Phosphoribosylglycinamide synthetase, C domain LQF05_RS04255 PF02844 Phosphoribosylglycinamide synthetase, N domain LQF05_RS04260 PF01808 AICARFT/IMPCHase bienzyme LQF05_RS04260 PF02142 MGS-like domain LQF05_RS04265 PF02954 Bacterial regulatory protein, Fis family LQF05_RS04270 PF01207 Dihydrouridine synthase (Dus) LQF05_RS04285 PF02785 Biotin carboxylase C-terminal domain LQF05_RS04285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LQF05_RS04285 PF00289 Biotin carboxylase, N-terminal domain LQF05_RS04290 PF00364 Biotin-requiring enzyme LQF05_RS04295 PF01220 Dehydroquinase class II LQF05_RS04300 PF11412 Disulphide bond corrector protein DsbC LQF05_RS04300 PF02683 Cytochrome C biogenesis protein transmembrane region LQF05_RS04310 PF01032 FecCD transport family LQF05_RS04315 PF00005 ABC transporter LQF05_RS04345 PF00912 Transglycosylase LQF05_RS04345 PF00905 Penicillin binding protein transpeptidase domain LQF05_RS04345 PF14814 Bifunctional transglycosylase second domain LQF05_RS04355 PF04287 tRNA pseudouridine synthase C LQF05_RS04355 PF00849 RNA pseudouridylate synthase LQF05_RS04365 PF00205 Thiamine pyrophosphate enzyme, central domain LQF05_RS04365 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LQF05_RS04365 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LQF05_RS04370 PF10369 Small subunit of acetolactate synthase LQF05_RS04375 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LQF05_RS04375 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LQF05_RS04380 PF01066 CDP-alcohol phosphatidyltransferase LQF05_RS04385 PF00174 Oxidoreductase molybdopterin binding domain LQF05_RS04390 PF01794 Ferric reductase like transmembrane component LQF05_RS04420 PF04403 Paraquat-inducible protein A LQF05_RS04425 PF04403 Paraquat-inducible protein A LQF05_RS04430 PF02470 MlaD protein LQF05_RS04450 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LQF05_RS04455 PF16653 Saccharopine dehydrogenase C-terminal domain LQF05_RS04455 PF03435 Saccharopine dehydrogenase NADP binding domain LQF05_RS04460 PF00682 HMGL-like LQF05_RS04460 PF08502 LeuA allosteric (dimerisation) domain LQF05_RS04470 PF00583 Acetyltransferase (GNAT) family LQF05_RS04480 PF02358 Trehalose-phosphatase LQF05_RS04485 PF00982 Glycosyltransferase family 20 LQF05_RS04490 PF00484 Carbonic anhydrase LQF05_RS04495 PF00892 EamA-like transporter family LQF05_RS04520 PF03573 outer membrane porin, OprD family LQF05_RS04525 PF07519 Tannase and feruloyl esterase LQF05_RS04535 PF00158 Sigma-54 interaction domain LQF05_RS04535 PF02954 Bacterial regulatory protein, Fis family LQF05_RS04535 PF13185 GAF domain LQF05_RS04540 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LQF05_RS04550 PF03480 Bacterial extracellular solute-binding protein, family 7 LQF05_RS04555 PF13411 MerR HTH family regulatory protein LQF05_RS04560 PF00108 Thiolase, N-terminal domain LQF05_RS04560 PF02803 Thiolase, C-terminal domain LQF05_RS04565 PF01144 Coenzyme A transferase LQF05_RS04570 PF01144 Coenzyme A transferase LQF05_RS04575 PF00682 HMGL-like LQF05_RS04580 PF02785 Biotin carboxylase C-terminal domain LQF05_RS04580 PF00289 Biotin carboxylase, N-terminal domain LQF05_RS04580 PF00364 Biotin-requiring enzyme LQF05_RS04580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LQF05_RS04585 PF00378 Enoyl-CoA hydratase/isomerase LQF05_RS04590 PF01039 Carboxyl transferase domain LQF05_RS04595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQF05_RS04595 PF02770 Acyl-CoA dehydrogenase, middle domain LQF05_RS04595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQF05_RS04600 PF03851 UV-endonuclease UvdE LQF05_RS04605 PF13193 AMP-binding enzyme C-terminal domain LQF05_RS04605 PF00501 AMP-binding enzyme LQF05_RS04615 PF03573 outer membrane porin, OprD family LQF05_RS04620 PF00005 ABC transporter LQF05_RS04620 PF12399 Branched-chain amino acid ATP-binding cassette transporter LQF05_RS04625 PF00005 ABC transporter LQF05_RS04635 PF02653 Branched-chain amino acid transport system / permease component LQF05_RS04650 PF01926 50S ribosome-binding GTPase LQF05_RS04650 PF06071 Protein of unknown function (DUF933) LQF05_RS04655 PF01195 Peptidyl-tRNA hydrolase LQF05_RS04660 PF01386 Ribosomal L25p family LQF05_RS04660 PF14693 Ribosomal protein TL5, C-terminal domain LQF05_RS04665 PF14572 Phosphoribosyl synthetase-associated domain LQF05_RS04665 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LQF05_RS04680 PF08544 GHMP kinases C terminal LQF05_RS04680 PF00288 GHMP kinases N terminal domain LQF05_RS04685 PF03550 Outer membrane lipoprotein LolB LQF05_RS04695 PF01488 Shikimate / quinate 5-dehydrogenase LQF05_RS04695 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LQF05_RS04695 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LQF05_RS04700 PF00472 RF-1 domain LQF05_RS04700 PF03462 PCRF domain LQF05_RS04705 PF17827 PrmC N-terminal domain LQF05_RS04705 PF05175 Methyltransferase small domain LQF05_RS04710 PF00899 ThiF family LQF05_RS04715 PF01177 Asp/Glu/Hydantoin racemase LQF05_RS04720 PF09411 Lipid A 3-O-deacylase (PagL) LQF05_RS04730 PF00860 Permease family LQF05_RS04740 PF00156 Phosphoribosyl transferase domain LQF05_RS04750 PF07044 Protein of unknown function (DUF1329) LQF05_RS04755 PF00196 Bacterial regulatory proteins, luxR family LQF05_RS04780 PF02810 SEC-C motif LQF05_RS04780 PF07517 SecA DEAD-like domain LQF05_RS04780 PF07516 SecA Wing and Scaffold domain LQF05_RS04780 PF01043 SecA preprotein cross-linking domain LQF05_RS04785 PF01960 ArgJ family LQF05_RS04795 PF00293 NUDIX domain LQF05_RS04800 PF10417 C-terminal domain of 1-Cys peroxiredoxin LQF05_RS04800 PF00578 AhpC/TSA family LQF05_RS04805 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQF05_RS04805 PF13192 Thioredoxin domain LQF05_RS04825 PF01923 Cobalamin adenosyltransferase LQF05_RS04830 PF08447 PAS fold LQF05_RS04830 PF00989 PAS fold LQF05_RS04830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS04830 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS04835 PF08546 Ketopantoate reductase PanE/ApbA C terminal LQF05_RS04835 PF02558 Ketopantoate reductase PanE/ApbA LQF05_RS04840 PF00072 Response regulator receiver domain LQF05_RS04845 PF04461 Protein of unknown function (DUF520) LQF05_RS04850 PF00924 Mechanosensitive ion channel LQF05_RS04850 PF05552 Conserved TM helix LQF05_RS04855 PF07690 Major Facilitator Superfamily LQF05_RS04880 PF04186 FxsA cytoplasmic membrane protein LQF05_RS04885 PF00166 Chaperonin 10 Kd subunit LQF05_RS04890 PF00118 TCP-1/cpn60 chaperonin family LQF05_RS04900 PF00873 AcrB/AcrD/AcrF family LQF05_RS04905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQF05_RS04910 PF00672 HAMP domain LQF05_RS04910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS04935 PF04011 LemA family LQF05_RS04950 PF00563 EAL domain LQF05_RS04950 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS04950 PF03707 Bacterial signalling protein N terminal repeat LQF05_RS04955 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LQF05_RS04955 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LQF05_RS04960 PF01810 LysE type translocator LQF05_RS04965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS04965 PF03466 LysR substrate binding domain LQF05_RS04980 PF00657 GDSL-like Lipase/Acylhydrolase LQF05_RS04980 PF03797 Autotransporter beta-domain LQF05_RS04985 PF05230 MASE2 domain LQF05_RS04985 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS04990 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LQF05_RS04990 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LQF05_RS05005 PF00042 Globin LQF05_RS05005 PF00175 Oxidoreductase NAD-binding domain LQF05_RS05005 PF00970 Oxidoreductase FAD-binding domain LQF05_RS05015 PF03253 Urea transporter LQF05_RS05020 PF00224 Pyruvate kinase, barrel domain LQF05_RS05020 PF02887 Pyruvate kinase, alpha/beta domain LQF05_RS05025 PF13660 Domain of unknown function (DUF4147) LQF05_RS05025 PF05161 MOFRL family LQF05_RS05030 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LQF05_RS05030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LQF05_RS05035 PF01261 Xylose isomerase-like TIM barrel LQF05_RS05040 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LQF05_RS05040 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LQF05_RS05040 PF00205 Thiamine pyrophosphate enzyme, central domain LQF05_RS05045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS05045 PF03466 LysR substrate binding domain LQF05_RS05050 PF00576 HIUase/Transthyretin family LQF05_RS05060 PF00486 Transcriptional regulatory protein, C terminal LQF05_RS05060 PF00072 Response regulator receiver domain LQF05_RS05065 PF00672 HAMP domain LQF05_RS05065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS05065 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS05070 PF03372 Endonuclease/Exonuclease/phosphatase family LQF05_RS05075 PF13188 PAS domain LQF05_RS05075 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS05075 PF03707 Bacterial signalling protein N terminal repeat LQF05_RS05075 PF00563 EAL domain LQF05_RS05085 PF02321 Outer membrane efflux protein LQF05_RS05090 PF13533 Biotin-lipoyl like LQF05_RS05100 PF08362 YcdC-like protein, C-terminal region LQF05_RS05100 PF00440 Bacterial regulatory proteins, tetR family LQF05_RS05105 PF00672 HAMP domain LQF05_RS05105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS05105 PF02743 Cache domain LQF05_RS05115 PF00860 Permease family LQF05_RS05120 PF00999 Sodium/hydrogen exchanger family LQF05_RS05120 PF02254 TrkA-N domain LQF05_RS05125 PF00860 Permease family LQF05_RS05135 PF04115 Ureidoglycolate lyase LQF05_RS05140 PF03561 Allantoicase repeat LQF05_RS05145 PF01014 Uricase LQF05_RS05145 PF09349 OHCU decarboxylase LQF05_RS05150 PF01522 Polysaccharide deacetylase LQF05_RS05155 PF00576 HIUase/Transthyretin family LQF05_RS05165 PF00860 Permease family LQF05_RS05170 PF00392 Bacterial regulatory proteins, gntR family LQF05_RS05170 PF07729 FCD domain LQF05_RS05175 PF00005 ABC transporter LQF05_RS05180 PF00950 ABC 3 transport family LQF05_RS05185 PF01297 Zinc-uptake complex component A periplasmic LQF05_RS05190 PF01979 Amidohydrolase family LQF05_RS05200 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LQF05_RS05200 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LQF05_RS05205 PF01799 [2Fe-2S] binding domain LQF05_RS05205 PF00111 2Fe-2S iron-sulfur cluster binding domain LQF05_RS05210 PF03171 2OG-Fe(II) oxygenase superfamily LQF05_RS05210 PF14226 non-haem dioxygenase in morphine synthesis N-terminal LQF05_RS05215 PF02608 ABC transporter substrate-binding protein PnrA-like LQF05_RS05220 PF01979 Amidohydrolase family LQF05_RS05230 PF00689 Cation transporting ATPase, C-terminus LQF05_RS05230 PF00690 Cation transporter/ATPase, N-terminus LQF05_RS05235 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQF05_RS05235 PF01464 Transglycosylase SLT domain LQF05_RS05240 PF01541 GIY-YIG catalytic domain LQF05_RS05255 PF03976 Polyphosphate kinase 2 (PPK2) LQF05_RS05260 PF04245 37-kD nucleoid-associated bacterial protein LQF05_RS05270 PF07690 Major Facilitator Superfamily LQF05_RS05285 PF05971 RNA methyltransferase LQF05_RS05290 PF06779 Uncharacterised MFS-type transporter YbfB LQF05_RS05295 PF03600 Citrate transporter LQF05_RS05295 PF02080 TrkA-C domain LQF05_RS05305 PF03600 Citrate transporter LQF05_RS05310 PF10458 Valyl tRNA synthetase tRNA binding arm LQF05_RS05310 PF00133 tRNA synthetases class I (I, L, M and V) LQF05_RS05310 PF08264 Anticodon-binding domain of tRNA LQF05_RS05320 PF04364 DNA polymerase III chi subunit, HolC LQF05_RS05325 PF02789 Cytosol aminopeptidase family, N-terminal domain LQF05_RS05325 PF00883 Cytosol aminopeptidase family, catalytic domain LQF05_RS05330 PF03739 Lipopolysaccharide export system permease LptF/LptG LQF05_RS05335 PF03739 Lipopolysaccharide export system permease LptF/LptG LQF05_RS05345 PF00313 'Cold-shock' DNA-binding domain LQF05_RS05355 PF02547 Queuosine biosynthesis protein LQF05_RS05360 PF01702 Queuine tRNA-ribosyltransferase LQF05_RS05365 PF02699 Preprotein translocase subunit LQF05_RS05370 PF07549 SecD/SecF GG Motif LQF05_RS05370 PF02355 Protein export membrane protein LQF05_RS05370 PF13721 SecD export protein N-terminal TM region LQF05_RS05375 PF02355 Protein export membrane protein LQF05_RS05375 PF07549 SecD/SecF GG Motif LQF05_RS05380 PF05433 Glycine zipper 2TM domain LQF05_RS05385 PF00459 Inositol monophosphatase family LQF05_RS05390 PF00588 SpoU rRNA Methylase family LQF05_RS05395 PF00132 Bacterial transferase hexapeptide (six repeats) LQF05_RS05400 PF02082 Transcriptional regulator LQF05_RS05405 PF00266 Aminotransferase class-V LQF05_RS05410 PF01592 NifU-like N terminal domain LQF05_RS05415 PF01521 Iron-sulphur cluster biosynthesis LQF05_RS05420 PF00226 DnaJ domain LQF05_RS05420 PF07743 HSCB C-terminal oligomerisation domain LQF05_RS05425 PF00012 Hsp70 protein LQF05_RS05430 PF00111 2Fe-2S iron-sulfur cluster binding domain LQF05_RS05435 PF04384 Iron-sulphur cluster assembly LQF05_RS05440 PF00334 Nucleoside diphosphate kinase LQF05_RS05445 PF04055 Radical SAM superfamily LQF05_RS05460 PF04551 GcpE protein LQF05_RS05465 PF13393 Histidyl-tRNA synthetase LQF05_RS05465 PF03129 Anticodon binding domain LQF05_RS05470 PF09976 Tetratricopeptide repeat-like domain LQF05_RS05475 PF13360 PQQ-like domain LQF05_RS05480 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LQF05_RS05480 PF01926 50S ribosome-binding GTPase LQF05_RS05485 PF00132 Bacterial transferase hexapeptide (six repeats) LQF05_RS05485 PF06426 Serine acetyltransferase, N-terminal LQF05_RS05490 PF00155 Aminotransferase class I and II LQF05_RS05495 PF00795 Carbon-nitrogen hydrolase LQF05_RS05500 PF13520 Amino acid permease LQF05_RS05515 PF09997 Predicted membrane protein (DUF2238) LQF05_RS05520 PF04231 Endonuclease I LQF05_RS05525 PF00892 EamA-like transporter family LQF05_RS05530 PF00107 Zinc-binding dehydrogenase LQF05_RS05530 PF08240 Alcohol dehydrogenase GroES-like domain LQF05_RS05540 PF08502 LeuA allosteric (dimerisation) domain LQF05_RS05540 PF00682 HMGL-like LQF05_RS05555 PF00924 Mechanosensitive ion channel LQF05_RS05565 PF01551 Peptidase family M23 LQF05_RS05565 PF08525 Opacity-associated protein A N-terminal motif LQF05_RS05565 PF01476 LysM domain LQF05_RS05570 PF13742 OB-fold nucleic acid binding domain LQF05_RS05570 PF02601 Exonuclease VII, large subunit LQF05_RS05580 PF00478 IMP dehydrogenase / GMP reductase domain LQF05_RS05580 PF00571 CBS domain LQF05_RS05585 PF02540 NAD synthase LQF05_RS05585 PF00958 GMP synthase C terminal domain LQF05_RS05585 PF00117 Glutamine amidotransferase class-I LQF05_RS05590 PF00394 Multicopper oxidase LQF05_RS05590 PF07732 Multicopper oxidase LQF05_RS05590 PF07731 Multicopper oxidase LQF05_RS05595 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LQF05_RS05600 PF08402 TOBE domain LQF05_RS05600 PF00005 ABC transporter LQF05_RS05605 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LQF05_RS05605 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LQF05_RS05610 PF00462 Glutaredoxin LQF05_RS05625 PF00155 Aminotransferase class I and II LQF05_RS05630 PF04851 Type III restriction enzyme, res subunit LQF05_RS05630 PF00271 Helicase conserved C-terminal domain LQF05_RS05630 PF17757 UvrB interaction domain LQF05_RS05630 PF12344 Ultra-violet resistance protein B LQF05_RS05630 PF02151 UvrB/uvrC motif LQF05_RS05635 PF00749 tRNA synthetases class I (E and Q), catalytic domain LQF05_RS05670 PF00817 impB/mucB/samB family LQF05_RS05670 PF11798 IMS family HHH motif LQF05_RS05695 PF00263 Bacterial type II and III secretion system protein LQF05_RS05695 PF03958 Bacterial type II/III secretion system short domain LQF05_RS05700 PF13401 AAA domain LQF05_RS05700 PF01471 Putative peptidoglycan binding domain LQF05_RS05710 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LQF05_RS05710 PF00437 Type II/IV secretion system protein LQF05_RS05715 PF00482 Type II secretion system (T2SS), protein F LQF05_RS05720 PF07963 Prokaryotic N-terminal methylation motif LQF05_RS05725 PF00114 Pilin (bacterial filament) LQF05_RS05725 PF07963 Prokaryotic N-terminal methylation motif LQF05_RS05770 PF00005 ABC transporter LQF05_RS05775 PF12399 Branched-chain amino acid ATP-binding cassette transporter LQF05_RS05775 PF00005 ABC transporter LQF05_RS05780 PF11862 Domain of unknown function (DUF3382) LQF05_RS05780 PF02653 Branched-chain amino acid transport system / permease component LQF05_RS05785 PF02653 Branched-chain amino acid transport system / permease component LQF05_RS05790 PF13458 Periplasmic binding protein LQF05_RS05800 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS05805 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS05810 PF00005 ABC transporter LQF05_RS05825 PF02673 Bacitracin resistance protein BacA LQF05_RS05830 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LQF05_RS05830 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LQF05_RS05835 PF01261 Xylose isomerase-like TIM barrel LQF05_RS05840 PF07690 Major Facilitator Superfamily LQF05_RS05845 PF00012 Hsp70 protein LQF05_RS05855 PF00176 SNF2 family N-terminal domain LQF05_RS05855 PF18337 RapA N-terminal Tudor like domain LQF05_RS05855 PF18339 RapA N-terminal Tudor like domain 1 LQF05_RS05855 PF00271 Helicase conserved C-terminal domain LQF05_RS05855 PF12137 RNA polymerase recycling family C-terminal LQF05_RS05875 PF17967 Pullulanase N2 domain LQF05_RS05875 PF18494 Pullulanase Ins domain LQF05_RS05875 PF03714 Bacterial pullanase-associated domain LQF05_RS05875 PF11852 Domain of unknown function (DUF3372) LQF05_RS05875 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LQF05_RS05880 PF01575 MaoC like domain LQF05_RS05885 PF00501 AMP-binding enzyme LQF05_RS05885 PF13193 AMP-binding enzyme C-terminal domain LQF05_RS05890 PF00501 AMP-binding enzyme LQF05_RS05890 PF13193 AMP-binding enzyme C-terminal domain LQF05_RS05895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS05895 PF17200 Single Cache domain 2 LQF05_RS05895 PF00672 HAMP domain LQF05_RS05900 PF17200 Single Cache domain 2 LQF05_RS05900 PF00672 HAMP domain LQF05_RS05900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS05905 PF04389 Peptidase family M28 LQF05_RS05905 PF02225 PA domain LQF05_RS05910 PF00270 DEAD/DEAH box helicase LQF05_RS05910 PF11898 Domain of unknown function (DUF3418) LQF05_RS05910 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LQF05_RS05910 PF00271 Helicase conserved C-terminal domain LQF05_RS05910 PF04408 Helicase associated domain (HA2) LQF05_RS05920 PF16697 Inner membrane component of T3SS, cytoplasmic domain LQF05_RS05925 PF00069 Protein kinase domain LQF05_RS05925 PF03793 PASTA domain LQF05_RS05935 PF08032 RNA 2'-O ribose methyltransferase substrate binding LQF05_RS05935 PF00588 SpoU rRNA Methylase family LQF05_RS05945 PF01728 FtsJ-like methyltransferase LQF05_RS05950 PF05899 Protein of unknown function (DUF861) LQF05_RS05950 PF07883 Cupin domain LQF05_RS05955 PF12697 Alpha/beta hydrolase family LQF05_RS05960 PF01738 Dienelactone hydrolase family LQF05_RS05965 PF00753 Metallo-beta-lactamase superfamily LQF05_RS05975 PF03600 Citrate transporter LQF05_RS05990 PF03795 YCII-related domain LQF05_RS06005 PF03473 MOSC domain LQF05_RS06005 PF03475 3-alpha domain LQF05_RS06010 PF07687 Peptidase dimerisation domain LQF05_RS06010 PF01546 Peptidase family M20/M25/M40 LQF05_RS06015 PF01230 HIT domain LQF05_RS06030 PF00005 ABC transporter LQF05_RS06035 PF04286 Protein of unknown function (DUF445) LQF05_RS06045 PF00672 HAMP domain LQF05_RS06045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS06060 PF01810 LysE type translocator LQF05_RS06065 PF12833 Helix-turn-helix domain LQF05_RS06080 PF12729 Four helix bundle sensory module for signal transduction LQF05_RS06080 PF00672 HAMP domain LQF05_RS06080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS06085 PF00561 alpha/beta hydrolase fold LQF05_RS06085 PF00364 Biotin-requiring enzyme LQF05_RS06095 PF07690 Major Facilitator Superfamily LQF05_RS06100 PF13426 PAS domain LQF05_RS06100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS06100 PF08447 PAS fold LQF05_RS06105 PF03600 Citrate transporter LQF05_RS06105 PF02080 TrkA-C domain LQF05_RS06115 PF03449 Transcription elongation factor, N-terminal LQF05_RS06115 PF01272 Transcription elongation factor, GreA/GreB, C-term LQF05_RS06120 PF01751 Toprim domain LQF05_RS06120 PF01131 DNA topoisomerase LQF05_RS06130 PF00375 Sodium:dicarboxylate symporter family LQF05_RS06145 PF02653 Branched-chain amino acid transport system / permease component LQF05_RS06150 PF02653 Branched-chain amino acid transport system / permease component LQF05_RS06155 PF00005 ABC transporter LQF05_RS06160 PF12833 Helix-turn-helix domain LQF05_RS06160 PF06719 AraC-type transcriptional regulator N-terminus LQF05_RS06170 PF00106 short chain dehydrogenase LQF05_RS06180 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS06185 PF00005 ABC transporter LQF05_RS06190 PF09084 NMT1/THI5 like LQF05_RS06205 PF00290 Tryptophan synthase alpha chain LQF05_RS06210 PF00291 Pyridoxal-phosphate dependent enzyme LQF05_RS06215 PF03466 LysR substrate binding domain LQF05_RS06215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS06225 PF16363 GDP-mannose 4,6 dehydratase LQF05_RS06235 PF03275 UDP-galactopyranose mutase LQF05_RS06245 PF00005 ABC transporter LQF05_RS06245 PF00664 ABC transporter transmembrane region LQF05_RS06250 PF13619 KTSC domain LQF05_RS06255 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS06255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS06255 PF00072 Response regulator receiver domain LQF05_RS06255 PF13188 PAS domain LQF05_RS06255 PF08448 PAS fold LQF05_RS06260 PF06745 KaiC LQF05_RS06275 PF00072 Response regulator receiver domain LQF05_RS06275 PF13188 PAS domain LQF05_RS06275 PF08448 PAS fold LQF05_RS06275 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS06275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS06280 PF01810 LysE type translocator LQF05_RS06295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS06295 PF03466 LysR substrate binding domain LQF05_RS06305 PF02798 Glutathione S-transferase, N-terminal domain LQF05_RS06310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS06310 PF03466 LysR substrate binding domain LQF05_RS06315 PF00106 short chain dehydrogenase LQF05_RS06325 PF04966 Carbohydrate-selective porin, OprB family LQF05_RS06330 PF13360 PQQ-like domain LQF05_RS06330 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LQF05_RS06340 PF02817 e3 binding domain LQF05_RS06340 PF00364 Biotin-requiring enzyme LQF05_RS06340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LQF05_RS06345 PF02817 e3 binding domain LQF05_RS06345 PF00364 Biotin-requiring enzyme LQF05_RS06345 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LQF05_RS06350 PF02779 Transketolase, pyrimidine binding domain LQF05_RS06350 PF02780 Transketolase, C-terminal domain LQF05_RS06355 PF00107 Zinc-binding dehydrogenase LQF05_RS06355 PF08240 Alcohol dehydrogenase GroES-like domain LQF05_RS06360 PF00676 Dehydrogenase E1 component LQF05_RS06365 PF00732 GMC oxidoreductase LQF05_RS06365 PF05199 GMC oxidoreductase LQF05_RS06375 PF02954 Bacterial regulatory protein, Fis family LQF05_RS06375 PF01590 GAF domain LQF05_RS06375 PF00158 Sigma-54 interaction domain LQF05_RS06385 PF00698 Acyl transferase domain LQF05_RS06385 PF08240 Alcohol dehydrogenase GroES-like domain LQF05_RS06385 PF16197 Ketoacyl-synthetase C-terminal extension LQF05_RS06385 PF02801 Beta-ketoacyl synthase, C-terminal domain LQF05_RS06385 PF00109 Beta-ketoacyl synthase, N-terminal domain LQF05_RS06385 PF00550 Phosphopantetheine attachment site LQF05_RS06385 PF14765 Polyketide synthase dehydratase LQF05_RS06385 PF08659 KR domain LQF05_RS06400 PF10996 Beta-Casp domain LQF05_RS06400 PF00753 Metallo-beta-lactamase superfamily LQF05_RS06400 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LQF05_RS06405 PF10672 S-adenosylmethionine-dependent methyltransferase LQF05_RS06405 PF02926 THUMP domain LQF05_RS06405 PF01170 Putative RNA methylase family UPF0020 LQF05_RS06410 PF18030 RimK PreATP-grasp domain LQF05_RS06410 PF08443 RimK-like ATP-grasp domain LQF05_RS06415 PF03466 LysR substrate binding domain LQF05_RS06415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS06420 PF00440 Bacterial regulatory proteins, tetR family LQF05_RS06420 PF08362 YcdC-like protein, C-terminal region LQF05_RS06440 PF03783 Curli production assembly/transport component CsgG LQF05_RS06460 PF01810 LysE type translocator LQF05_RS06470 PF00106 short chain dehydrogenase LQF05_RS06475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS06475 PF03466 LysR substrate binding domain LQF05_RS06480 PF06055 Exopolysaccharide synthesis, ExoD LQF05_RS06485 PF01717 Cobalamin-independent synthase, Catalytic domain LQF05_RS06485 PF08267 Cobalamin-independent synthase, N-terminal domain LQF05_RS06490 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LQF05_RS06490 PF01266 FAD dependent oxidoreductase LQF05_RS06495 PF04073 Aminoacyl-tRNA editing domain LQF05_RS06500 PF12796 Ankyrin repeats (3 copies) LQF05_RS06500 PF00023 Ankyrin repeat LQF05_RS06505 PF12843 Putative quorum-sensing-regulated virulence factor LQF05_RS06515 PF00034 Cytochrome c LQF05_RS06520 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LQF05_RS06525 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LQF05_RS06525 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LQF05_RS06530 PF02657 Fe-S metabolism associated domain LQF05_RS06535 PF00266 Aminotransferase class-V LQF05_RS06540 PF14602 Hexapeptide repeat of succinyl-transferase LQF05_RS06540 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle LQF05_RS06545 PF03960 ArsC family LQF05_RS06565 PF00155 Aminotransferase class I and II LQF05_RS06580 PF00551 Formyl transferase LQF05_RS06585 PF00586 AIR synthase related protein, N-terminal domain LQF05_RS06585 PF02769 AIR synthase related protein, C-terminal domain LQF05_RS06595 PF01594 AI-2E family transporter LQF05_RS06600 PF00308 Bacterial dnaA protein LQF05_RS06610 PF03358 NADPH-dependent FMN reductase LQF05_RS06615 PF03960 ArsC family LQF05_RS06620 PF03631 Virulence factor BrkB LQF05_RS06635 PF00578 AhpC/TSA family LQF05_RS06650 PF03129 Anticodon binding domain LQF05_RS06650 PF04073 Aminoacyl-tRNA editing domain LQF05_RS06650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LQF05_RS06655 PF03573 outer membrane porin, OprD family LQF05_RS06665 PF04102 SlyX LQF05_RS06670 PF00313 'Cold-shock' DNA-binding domain LQF05_RS06675 PF00210 Ferritin-like domain LQF05_RS06680 PF01336 OB-fold nucleic acid binding domain LQF05_RS06680 PF00152 tRNA synthetases class II (D, K and N) LQF05_RS06680 PF02938 GAD domain LQF05_RS06685 PF01709 Transcriptional regulator LQF05_RS06690 PF02075 Crossover junction endodeoxyribonuclease RuvC LQF05_RS06695 PF07499 RuvA, C-terminal domain LQF05_RS06695 PF01330 RuvA N terminal domain LQF05_RS06700 PF17864 RuvB AAA lid domain LQF05_RS06700 PF05491 RuvB C-terminal winged helix domain LQF05_RS06700 PF05496 Holliday junction DNA helicase RuvB P-loop domain LQF05_RS06705 PF03061 Thioesterase superfamily LQF05_RS06710 PF01618 MotA/TolQ/ExbB proton channel family LQF05_RS06715 PF02472 Biopolymer transport protein ExbD/TolR LQF05_RS06725 PF07676 WD40-like Beta Propeller Repeat LQF05_RS06725 PF04052 TolB amino-terminal domain LQF05_RS06730 PF00691 OmpA family LQF05_RS06735 PF16331 TolA binding protein trimerisation LQF05_RS06735 PF13525 Outer membrane lipoprotein LQF05_RS06740 PF04055 Radical SAM superfamily LQF05_RS06745 PF06508 Queuosine biosynthesis protein QueC LQF05_RS06755 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LQF05_RS06755 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LQF05_RS06760 PF02445 Quinolinate synthetase A protein LQF05_RS06765 PF01435 Peptidase family M48 LQF05_RS06770 PF01206 Sulfurtransferase TusA LQF05_RS06775 PF01594 AI-2E family transporter LQF05_RS06780 PF00578 AhpC/TSA family LQF05_RS06790 PF00701 Dihydrodipicolinate synthetase family LQF05_RS06800 PF01259 SAICAR synthetase LQF05_RS06810 PF00136 DNA polymerase family B LQF05_RS06810 PF03104 DNA polymerase family B, exonuclease domain LQF05_RS06825 PF13617 YnbE-like lipoprotein LQF05_RS06840 PF02646 RmuC family LQF05_RS06845 PF13194 Domain of unknown function (DUF4010) LQF05_RS06850 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS06850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS06870 PF07690 Major Facilitator Superfamily LQF05_RS06875 PF04381 Putative exonuclease, RdgC LQF05_RS06890 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LQF05_RS06890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQF05_RS06895 PF00210 Ferritin-like domain LQF05_RS06900 PF04324 BFD-like [2Fe-2S] binding domain LQF05_RS06905 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS06905 PF00072 Response regulator receiver domain LQF05_RS06910 PF07152 YaeQ protein LQF05_RS06915 PF01566 Natural resistance-associated macrophage protein LQF05_RS06920 PF07286 Protein of unknown function (DUF1445) LQF05_RS06925 PF02626 Carboxyltransferase domain, subdomain A and B LQF05_RS06930 PF02682 Carboxyltransferase domain, subdomain C and D LQF05_RS06935 PF03746 LamB/YcsF family LQF05_RS06945 PF02272 DHHA1 domain LQF05_RS06945 PF01368 DHH family LQF05_RS06945 PF17768 RecJ OB domain LQF05_RS06950 PF01568 Molydopterin dinucleotide binding domain LQF05_RS06950 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LQF05_RS06950 PF00384 Molybdopterin oxidoreductase LQF05_RS06955 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQF05_RS06970 PF01336 OB-fold nucleic acid binding domain LQF05_RS06970 PF00152 tRNA synthetases class II (D, K and N) LQF05_RS06995 PF00691 OmpA family LQF05_RS06995 PF05736 OprF membrane domain LQF05_RS07010 PF00311 Phosphoenolpyruvate carboxylase LQF05_RS07015 PF05191 Adenylate kinase, active site lid LQF05_RS07020 PF00814 Glycoprotease family LQF05_RS07040 PF04445 Putative SAM-dependent methyltransferase LQF05_RS07045 PF08361 MAATS-type transcriptional repressor, C-terminal region LQF05_RS07045 PF00440 Bacterial regulatory proteins, tetR family LQF05_RS07050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQF05_RS07055 PF00873 AcrB/AcrD/AcrF family LQF05_RS07060 PF00440 Bacterial regulatory proteins, tetR family LQF05_RS07080 PF00155 Aminotransferase class I and II LQF05_RS07080 PF00392 Bacterial regulatory proteins, gntR family LQF05_RS07085 PF13746 4Fe-4S dicluster domain LQF05_RS07085 PF12801 4Fe-4S binding domain LQF05_RS07085 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LQF05_RS07090 PF03788 LrgA family LQF05_RS07095 PF04172 LrgB-like family LQF05_RS07100 PF02567 Phenazine biosynthesis-like protein LQF05_RS07105 PF01915 Glycosyl hydrolase family 3 C-terminal domain LQF05_RS07105 PF00933 Glycosyl hydrolase family 3 N terminal domain LQF05_RS07105 PF14310 Fibronectin type III-like domain LQF05_RS07110 PF04349 Periplasmic glucan biosynthesis protein, MdoG LQF05_RS07115 PF00535 Glycosyl transferase family 2 LQF05_RS07120 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQF05_RS07125 PF17954 Quercetinase C-terminal cupin domain LQF05_RS07125 PF02678 Pirin LQF05_RS07130 PF03358 NADPH-dependent FMN reductase LQF05_RS07135 PF00583 Acetyltransferase (GNAT) family LQF05_RS07150 PF05275 Copper resistance protein B precursor (CopB) LQF05_RS07160 PF07731 Multicopper oxidase LQF05_RS07160 PF07732 Multicopper oxidase LQF05_RS07160 PF00394 Multicopper oxidase LQF05_RS07170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LQF05_RS07170 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQF05_RS07170 PF00403 Heavy-metal-associated domain LQF05_RS07175 PF00486 Transcriptional regulatory protein, C terminal LQF05_RS07175 PF00072 Response regulator receiver domain LQF05_RS07180 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS07180 PF00672 HAMP domain LQF05_RS07180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS07185 PF08534 Redoxin LQF05_RS07190 PF13098 Thioredoxin-like domain LQF05_RS07200 PF00583 Acetyltransferase (GNAT) family LQF05_RS07205 PF01553 Acyltransferase LQF05_RS07225 PF00905 Penicillin binding protein transpeptidase domain LQF05_RS07230 PF13302 Acetyltransferase (GNAT) domain LQF05_RS07235 PF00583 Acetyltransferase (GNAT) family LQF05_RS07240 PF00005 ABC transporter LQF05_RS07255 PF00313 'Cold-shock' DNA-binding domain LQF05_RS07265 PF13847 Methyltransferase domain LQF05_RS07270 PF07687 Peptidase dimerisation domain LQF05_RS07270 PF01546 Peptidase family M20/M25/M40 LQF05_RS07275 PF00899 ThiF family LQF05_RS07280 PF00267 Gram-negative porin LQF05_RS07300 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LQF05_RS07320 PF00271 Helicase conserved C-terminal domain LQF05_RS07320 PF00270 DEAD/DEAH box helicase LQF05_RS07335 PF03466 LysR substrate binding domain LQF05_RS07335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS07345 PF01925 Sulfite exporter TauE/SafE LQF05_RS07355 PF01266 FAD dependent oxidoreductase LQF05_RS07355 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LQF05_RS07360 PF00072 Response regulator receiver domain LQF05_RS07360 PF00672 HAMP domain LQF05_RS07360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS07360 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS07360 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LQF05_RS07360 PF01627 Hpt domain LQF05_RS07365 PF03458 UPF0126 domain LQF05_RS07370 PF03466 LysR substrate binding domain LQF05_RS07370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS07375 PF00291 Pyridoxal-phosphate dependent enzyme LQF05_RS07380 PF01938 TRAM domain LQF05_RS07380 PF05958 tRNA (Uracil-5-)-methyltransferase LQF05_RS07385 PF13291 ACT domain LQF05_RS07385 PF02824 TGS domain LQF05_RS07385 PF04607 Region found in RelA / SpoT proteins LQF05_RS07390 PF03819 MazG nucleotide pyrophosphohydrolase domain LQF05_RS07405 PF05139 Erythromycin esterase LQF05_RS07405 PF00156 Phosphoribosyl transferase domain LQF05_RS07420 PF00271 Helicase conserved C-terminal domain LQF05_RS07420 PF08494 DEAD/H associated LQF05_RS07420 PF00270 DEAD/DEAH box helicase LQF05_RS07425 PF04675 DNA ligase N terminus LQF05_RS07425 PF01068 ATP dependent DNA ligase domain LQF05_RS07425 PF04679 ATP dependent DNA ligase C terminal region LQF05_RS07440 PF00176 SNF2 family N-terminal domain LQF05_RS07440 PF12419 SNF2 Helicase protein LQF05_RS07440 PF00271 Helicase conserved C-terminal domain LQF05_RS07450 PF03461 TRCF domain LQF05_RS07450 PF17757 UvrB interaction domain LQF05_RS07450 PF02559 CarD-like/TRCF domain LQF05_RS07450 PF00271 Helicase conserved C-terminal domain LQF05_RS07450 PF00270 DEAD/DEAH box helicase LQF05_RS07455 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LQF05_RS07455 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LQF05_RS07460 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) LQF05_RS07460 PF11973 NQRA C-terminal domain LQF05_RS07465 PF03116 NQR2, RnfD, RnfE family LQF05_RS07470 PF04205 FMN-binding domain LQF05_RS07475 PF02508 Rnf-Nqr subunit, membrane protein LQF05_RS07480 PF02508 Rnf-Nqr subunit, membrane protein LQF05_RS07485 PF00175 Oxidoreductase NAD-binding domain LQF05_RS07485 PF00970 Oxidoreductase FAD-binding domain LQF05_RS07485 PF00111 2Fe-2S iron-sulfur cluster binding domain LQF05_RS07490 PF02424 ApbE family LQF05_RS07500 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQF05_RS07500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LQF05_RS07505 PF03009 Glycerophosphoryl diester phosphodiesterase family LQF05_RS07520 PF02687 FtsX-like permease family LQF05_RS07520 PF12704 MacB-like periplasmic core domain LQF05_RS07525 PF00005 ABC transporter LQF05_RS07530 PF02687 FtsX-like permease family LQF05_RS07530 PF12704 MacB-like periplasmic core domain LQF05_RS07540 PF03772 Competence protein LQF05_RS07540 PF00753 Metallo-beta-lactamase superfamily LQF05_RS07545 PF01618 MotA/TolQ/ExbB proton channel family LQF05_RS07555 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LQF05_RS07560 PF03966 Trm112p-like protein LQF05_RS07565 PF02348 Cytidylyltransferase LQF05_RS07570 PF01451 Low molecular weight phosphotyrosine protein phosphatase LQF05_RS07575 PF01565 FAD binding domain LQF05_RS07575 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LQF05_RS07580 PF12111 Polyribonucleotide phosphorylase C terminal LQF05_RS07580 PF10150 Ribonuclease E/G family LQF05_RS07580 PF00575 S1 RNA binding domain LQF05_RS07585 PF00849 RNA pseudouridylate synthase LQF05_RS07585 PF01479 S4 domain LQF05_RS07590 PF13419 Haloacid dehalogenase-like hydrolase LQF05_RS07595 PF06965 Na+/H+ antiporter 1 LQF05_RS07595 PF01343 Peptidase family S49 LQF05_RS07600 PF02545 Maf-like protein LQF05_RS07605 PF02620 Large ribosomal RNA subunit accumulation protein YceD LQF05_RS07610 PF01783 Ribosomal L32p protein family LQF05_RS07615 PF02504 Fatty acid synthesis protein LQF05_RS07620 PF00698 Acyl transferase domain LQF05_RS07630 PF00550 Phosphopantetheine attachment site LQF05_RS07635 PF00109 Beta-ketoacyl synthase, N-terminal domain LQF05_RS07635 PF02801 Beta-ketoacyl synthase, C-terminal domain LQF05_RS07640 PF01063 Amino-transferase class IV LQF05_RS07645 PF02618 YceG-like family LQF05_RS07650 PF02223 Thymidylate kinase LQF05_RS07655 PF09115 DNA polymerase III, delta subunit, C terminal LQF05_RS07665 PF01026 TatD related DNase LQF05_RS07670 PF00324 Amino acid permease LQF05_RS07675 PF00266 Aminotransferase class-V LQF05_RS07680 PF00440 Bacterial regulatory proteins, tetR family LQF05_RS07705 PF01012 Electron transfer flavoprotein domain LQF05_RS07710 PF01012 Electron transfer flavoprotein domain LQF05_RS07710 PF00766 Electron transfer flavoprotein FAD-binding domain LQF05_RS07725 PF00691 OmpA family LQF05_RS07725 PF05736 OprF membrane domain LQF05_RS07730 PF00155 Aminotransferase class I and II LQF05_RS07730 PF00392 Bacterial regulatory proteins, gntR family LQF05_RS07740 PF13188 PAS domain LQF05_RS07740 PF03707 Bacterial signalling protein N terminal repeat LQF05_RS07740 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS07740 PF00563 EAL domain LQF05_RS07750 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LQF05_RS07755 PF16884 N-terminal domain of oxidoreductase LQF05_RS07755 PF00107 Zinc-binding dehydrogenase LQF05_RS07780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS07780 PF03466 LysR substrate binding domain LQF05_RS07785 PF02525 Flavodoxin-like fold LQF05_RS07805 PF00141 Peroxidase LQF05_RS07810 PF13649 Methyltransferase domain LQF05_RS07820 PF02525 Flavodoxin-like fold LQF05_RS07825 PF03466 LysR substrate binding domain LQF05_RS07825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS07845 PF00268 Ribonucleotide reductase, small chain LQF05_RS07850 PF02867 Ribonucleotide reductase, barrel domain LQF05_RS07850 PF00317 Ribonucleotide reductase, all-alpha domain LQF05_RS07850 PF03477 ATP cone domain LQF05_RS07855 PF00072 Response regulator receiver domain LQF05_RS07855 PF00486 Transcriptional regulatory protein, C terminal LQF05_RS07860 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS07860 PF00672 HAMP domain LQF05_RS07860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS07865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQF05_RS07865 PF09317 Domain of unknown function (DUF1974) LQF05_RS07865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQF05_RS07865 PF02770 Acyl-CoA dehydrogenase, middle domain LQF05_RS07870 PF00924 Mechanosensitive ion channel LQF05_RS07875 PF00581 Rhodanese-like domain LQF05_RS07895 PF01966 HD domain LQF05_RS07895 PF11871 Domain of unknown function (DUF3391) LQF05_RS07905 PF00202 Aminotransferase class-III LQF05_RS07915 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LQF05_RS07920 PF00005 ABC transporter LQF05_RS07925 PF01061 ABC-2 type transporter LQF05_RS07930 PF14489 QueF-like protein LQF05_RS07930 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LQF05_RS07940 PF04333 MlaA lipoprotein LQF05_RS07950 PF00072 Response regulator receiver domain LQF05_RS07960 PF00923 Transaldolase/Fructose-6-phosphate aldolase LQF05_RS07965 PF01207 Dihydrouridine synthase (Dus) LQF05_RS07970 PF00589 Phage integrase family LQF05_RS08005 PF01926 50S ribosome-binding GTPase LQF05_RS08005 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LQF05_RS08030 PF13599 Pentapeptide repeats (9 copies) LQF05_RS08035 PF09905 DNA-binding protein VF530 LQF05_RS08045 PF07690 Major Facilitator Superfamily LQF05_RS08055 PF00440 Bacterial regulatory proteins, tetR family LQF05_RS08055 PF02909 Tetracyclin repressor-like, C-terminal domain LQF05_RS08065 PF13610 DDE domain LQF05_RS08070 PF01636 Phosphotransferase enzyme family LQF05_RS08075 PF13610 DDE domain LQF05_RS08085 PF10706 Aminoglycoside-2''-adenylyltransferase LQF05_RS08090 PF00186 Dihydrofolate reductase LQF05_RS08095 PF00893 Small Multidrug Resistance protein LQF05_RS08100 PF00809 Pterin binding enzyme LQF05_RS08115 PF13610 DDE domain LQF05_RS08145 PF02899 Phage integrase, N-terminal SAM-like domain LQF05_RS08145 PF00589 Phage integrase family LQF05_RS08310 PF13610 DDE domain LQF05_RS08315 PF13610 DDE domain LQF05_RS08325 PF02796 Helix-turn-helix domain of resolvase LQF05_RS08325 PF00239 Resolvase, N terminal domain LQF05_RS08330 PF01636 Phosphotransferase enzyme family LQF05_RS08335 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase LQF05_RS08345 PF00239 Resolvase, N terminal domain LQF05_RS08345 PF02796 Helix-turn-helix domain of resolvase LQF05_RS08355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQF05_RS08355 PF00529 HlyD membrane-fusion protein of T1SS LQF05_RS08360 PF00873 AcrB/AcrD/AcrF family LQF05_RS08365 PF02321 Outer membrane efflux protein LQF05_RS08370 PF02899 Phage integrase, N-terminal SAM-like domain LQF05_RS08370 PF00589 Phage integrase family LQF05_RS08375 PF03466 LysR substrate binding domain LQF05_RS08375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS08380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LQF05_RS08380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LQF05_RS08385 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS08395 PF00005 ABC transporter LQF05_RS08420 PF00589 Phage integrase family LQF05_RS08420 PF02899 Phage integrase, N-terminal SAM-like domain LQF05_RS08425 PF02887 Pyruvate kinase, alpha/beta domain LQF05_RS08425 PF00224 Pyruvate kinase, barrel domain LQF05_RS08435 PF03471 Transporter associated domain LQF05_RS08435 PF02080 TrkA-C domain LQF05_RS08435 PF00999 Sodium/hydrogen exchanger family LQF05_RS08440 PF02586 SOS response associated peptidase (SRAP) LQF05_RS08445 PF00717 Peptidase S24-like LQF05_RS08450 PF11799 impB/mucB/samB family C-terminal domain LQF05_RS08450 PF00817 impB/mucB/samB family LQF05_RS08450 PF13438 Domain of unknown function (DUF4113) LQF05_RS08495 PF02384 N-6 DNA Methylase LQF05_RS08500 PF01420 Type I restriction modification DNA specificity domain LQF05_RS08505 PF12102 Domain of unknown function (DUF3578) LQF05_RS08505 PF07728 AAA domain (dynein-related subfamily) LQF05_RS08505 PF12102 Domain of unknown function (DUF3578) LQF05_RS08505 PF07728 AAA domain (dynein-related subfamily) LQF05_RS08530 PF00176 SNF2 family N-terminal domain LQF05_RS08530 PF00271 Helicase conserved C-terminal domain LQF05_RS08530 PF12419 SNF2 Helicase protein LQF05_RS08535 PF11867 Domain of unknown function (DUF3387) LQF05_RS08535 PF18766 SWI2/SNF2 ATPase LQF05_RS08535 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LQF05_RS08540 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LQF05_RS08545 PF03480 Bacterial extracellular solute-binding protein, family 7 LQF05_RS08550 PF07519 Tannase and feruloyl esterase LQF05_RS08555 PF12833 Helix-turn-helix domain LQF05_RS08555 PF14525 AraC-binding-like domain LQF05_RS08560 PF00355 Rieske [2Fe-2S] domain LQF05_RS08560 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LQF05_RS08565 PF00866 Ring hydroxylating beta subunit LQF05_RS08570 PF00970 Oxidoreductase FAD-binding domain LQF05_RS08570 PF00111 2Fe-2S iron-sulfur cluster binding domain LQF05_RS08570 PF00175 Oxidoreductase NAD-binding domain LQF05_RS08575 PF00106 short chain dehydrogenase LQF05_RS08580 PF07690 Major Facilitator Superfamily LQF05_RS08585 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LQF05_RS08585 PF13378 Enolase C-terminal domain-like LQF05_RS08590 PF02426 Muconolactone delta-isomerase LQF05_RS08595 PF00775 Dioxygenase LQF05_RS08595 PF04444 Catechol dioxygenase N terminus LQF05_RS08600 PF03594 Benzoate membrane transport protein LQF05_RS08605 PF03573 outer membrane porin, OprD family LQF05_RS08635 PF13426 PAS domain LQF05_RS08635 PF00072 Response regulator receiver domain LQF05_RS08635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS08640 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQF05_RS08640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LQF05_RS08645 PF10415 Fumarase C C-terminus LQF05_RS08645 PF00206 Lyase LQF05_RS08655 PF01722 BolA-like protein LQF05_RS08660 PF17773 UPF0176 acylphosphatase like domain LQF05_RS08660 PF00581 Rhodanese-like domain LQF05_RS08670 PF00005 ABC transporter LQF05_RS08670 PF00664 ABC transporter transmembrane region LQF05_RS08675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS08675 PF00672 HAMP domain LQF05_RS08675 PF16591 Helical bimodular sensor domain LQF05_RS08685 PF00472 RF-1 domain LQF05_RS08695 PF10011 Predicted membrane protein (DUF2254) LQF05_RS08700 PF03466 LysR substrate binding domain LQF05_RS08700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS08710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQF05_RS08710 PF02770 Acyl-CoA dehydrogenase, middle domain LQF05_RS08710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQF05_RS08715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LQF05_RS08720 PF03972 MmgE/PrpD family LQF05_RS08725 PF02515 CoA-transferase family III LQF05_RS08730 PF03328 HpcH/HpaI aldolase/citrate lyase family LQF05_RS08735 PF03480 Bacterial extracellular solute-binding protein, family 7 LQF05_RS08740 PF00561 alpha/beta hydrolase fold LQF05_RS08765 PF00682 HMGL-like LQF05_RS08770 PF02515 CoA-transferase family III LQF05_RS08775 PF03466 LysR substrate binding domain LQF05_RS08775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS08780 PF03480 Bacterial extracellular solute-binding protein, family 7 LQF05_RS08785 PF10011 Predicted membrane protein (DUF2254) LQF05_RS08790 PF13193 AMP-binding enzyme C-terminal domain LQF05_RS08790 PF00501 AMP-binding enzyme LQF05_RS08790 PF16177 Acetyl-coenzyme A synthetase N-terminus LQF05_RS08800 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LQF05_RS08800 PF00326 Prolyl oligopeptidase family LQF05_RS08805 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LQF05_RS08805 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LQF05_RS08805 PF00378 Enoyl-CoA hydratase/isomerase LQF05_RS08810 PF02803 Thiolase, C-terminal domain LQF05_RS08810 PF00108 Thiolase, N-terminal domain LQF05_RS08820 PF01396 Topoisomerase DNA binding C4 zinc finger LQF05_RS08820 PF01131 DNA topoisomerase LQF05_RS08820 PF08272 Topoisomerase I zinc-ribbon-like LQF05_RS08820 PF01751 Toprim domain LQF05_RS08830 PF00892 EamA-like transporter family LQF05_RS08840 PF03846 Cell division inhibitor SulA LQF05_RS08845 PF00717 Peptidase S24-like LQF05_RS08845 PF01726 LexA DNA binding domain LQF05_RS08850 PF00440 Bacterial regulatory proteins, tetR family LQF05_RS08860 PF00933 Glycosyl hydrolase family 3 N terminal domain LQF05_RS08865 PF01048 Phosphorylase superfamily LQF05_RS08875 PF07517 SecA DEAD-like domain LQF05_RS08875 PF02810 SEC-C motif LQF05_RS08875 PF01043 SecA preprotein cross-linking domain LQF05_RS08875 PF07516 SecA Wing and Scaffold domain LQF05_RS08885 PF01804 Penicillin amidase LQF05_RS08890 PF01980 tRNA-methyltransferase O LQF05_RS08890 PF18389 TrmO C-terminal domain LQF05_RS08895 PF00291 Pyridoxal-phosphate dependent enzyme LQF05_RS08900 PF02028 BCCT, betaine/carnitine/choline family transporter LQF05_RS08905 PF00171 Aldehyde dehydrogenase family LQF05_RS08910 PF00732 GMC oxidoreductase LQF05_RS08910 PF05199 GMC oxidoreductase LQF05_RS08915 PF18693 TRAM domain LQF05_RS08915 PF04055 Radical SAM superfamily LQF05_RS08915 PF00919 Uncharacterized protein family UPF0004 LQF05_RS08940 PF13439 Glycosyltransferase Family 4 LQF05_RS08940 PF00534 Glycosyl transferases group 1 LQF05_RS08950 PF13439 Glycosyltransferase Family 4 LQF05_RS08950 PF00534 Glycosyl transferases group 1 LQF05_RS08965 PF13439 Glycosyltransferase Family 4 LQF05_RS08965 PF00534 Glycosyl transferases group 1 LQF05_RS08970 PF02357 Transcription termination factor nusG LQF05_RS08980 PF13614 AAA domain LQF05_RS08980 PF13807 G-rich domain on putative tyrosine kinase LQF05_RS08980 PF02706 Chain length determinant protein LQF05_RS08985 PF00535 Glycosyl transferase family 2 LQF05_RS08995 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LQF05_RS09025 PF01207 Dihydrouridine synthase (Dus) LQF05_RS09035 PF00011 Hsp20/alpha crystallin family LQF05_RS09040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS09045 PF00330 Aconitase family (aconitate hydratase) LQF05_RS09050 PF00694 Aconitase C-terminal domain LQF05_RS09055 PF00180 Isocitrate/isopropylmalate dehydrogenase LQF05_RS09060 PF02774 Semialdehyde dehydrogenase, dimerisation domain LQF05_RS09060 PF01118 Semialdehyde dehydrogenase, NAD binding domain LQF05_RS09065 PF01118 Semialdehyde dehydrogenase, NAD binding domain LQF05_RS09065 PF02774 Semialdehyde dehydrogenase, dimerisation domain LQF05_RS09075 PF01416 tRNA pseudouridine synthase LQF05_RS09080 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LQF05_RS09085 PF01039 Carboxyl transferase domain LQF05_RS09085 PF17848 Acetyl-coA carboxylase zinc finger domain LQF05_RS09090 PF08245 Mur ligase middle domain LQF05_RS09090 PF02875 Mur ligase family, glutamate ligase domain LQF05_RS09100 PF02674 Colicin V production protein LQF05_RS09105 PF00156 Phosphoribosyl transferase domain LQF05_RS09110 PF01053 Cys/Met metabolism PLP-dependent enzyme LQF05_RS09115 PF03958 Bacterial type II/III secretion system short domain LQF05_RS09115 PF00263 Bacterial type II and III secretion system protein LQF05_RS09135 PF09278 MerR, DNA binding LQF05_RS09135 PF00376 MerR family regulatory protein LQF05_RS09140 PF01810 LysE type translocator LQF05_RS09160 PF02514 CobN/Magnesium Chelatase LQF05_RS09165 PF00593 TonB dependent receptor LQF05_RS09165 PF07715 TonB-dependent Receptor Plug Domain LQF05_RS09170 PF01197 Ribosomal protein L31 LQF05_RS09175 PF01212 Beta-eliminating lyase LQF05_RS09180 PF03466 LysR substrate binding domain LQF05_RS09180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS09185 PF03358 NADPH-dependent FMN reductase LQF05_RS09190 PF07690 Major Facilitator Superfamily LQF05_RS09200 PF00563 EAL domain LQF05_RS09200 PF03707 Bacterial signalling protein N terminal repeat LQF05_RS09200 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS09210 PF01447 Thermolysin metallopeptidase, catalytic domain LQF05_RS09210 PF02868 Thermolysin metallopeptidase, alpha-helical domain LQF05_RS09210 PF16485 Protealysin propeptide LQF05_RS09215 PF01654 Cytochrome bd terminal oxidase subunit I LQF05_RS09220 PF02322 Cytochrome bd terminal oxidase subunit II LQF05_RS09230 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LQF05_RS09230 PF12833 Helix-turn-helix domain LQF05_RS09240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQF05_RS09240 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQF05_RS09265 PF01554 MatE LQF05_RS09270 PF11890 Domain of unknown function (DUF3410) LQF05_RS09270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LQF05_RS09270 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LQF05_RS09275 PF12170 DNA polymerase III tau subunit V interacting with alpha LQF05_RS09275 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LQF05_RS09275 PF12169 DNA polymerase III subunits gamma and tau domain III LQF05_RS09280 PF02575 YbaB/EbfC DNA-binding family LQF05_RS09285 PF13662 Toprim domain LQF05_RS09285 PF02132 RecR protein LQF05_RS09295 PF00005 ABC transporter LQF05_RS09300 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS09310 PF02630 SCO1/SenC LQF05_RS09315 PF00156 Phosphoribosyl transferase domain LQF05_RS09320 PF00027 Cyclic nucleotide-binding domain LQF05_RS09320 PF00325 Bacterial regulatory proteins, crp family LQF05_RS09325 PF04055 Radical SAM superfamily LQF05_RS09325 PF06969 HemN C-terminal domain LQF05_RS09330 PF02540 NAD synthase LQF05_RS09345 PF00403 Heavy-metal-associated domain LQF05_RS09355 PF12801 4Fe-4S binding domain LQF05_RS09355 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LQF05_RS09355 PF13746 4Fe-4S dicluster domain LQF05_RS09360 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LQF05_RS09360 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LQF05_RS09375 PF00115 Cytochrome C and Quinol oxidase polypeptide I LQF05_RS09380 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LQF05_RS09380 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LQF05_RS09390 PF00115 Cytochrome C and Quinol oxidase polypeptide I LQF05_RS09400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS09400 PF08447 PAS fold LQF05_RS09405 PF00330 Aconitase family (aconitate hydratase) LQF05_RS09405 PF00694 Aconitase C-terminal domain LQF05_RS09410 PF01728 FtsJ-like methyltransferase LQF05_RS09410 PF18125 RlmM ferredoxin-like domain LQF05_RS09415 PF01206 Sulfurtransferase TusA LQF05_RS09430 PF00115 Cytochrome C and Quinol oxidase polypeptide I LQF05_RS09435 PF00034 Cytochrome c LQF05_RS09435 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LQF05_RS09435 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LQF05_RS09450 PF00520 Ion transport protein LQF05_RS09450 PF00027 Cyclic nucleotide-binding domain LQF05_RS09455 PF04055 Radical SAM superfamily LQF05_RS09455 PF06463 Molybdenum Cofactor Synthesis C LQF05_RS09460 PF02463 RecF/RecN/SMC N terminal domain LQF05_RS09465 PF04354 ZipA, C-terminal FtsZ-binding domain LQF05_RS09470 PF01653 NAD-dependent DNA ligase adenylation domain LQF05_RS09470 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LQF05_RS09470 PF12826 Helix-hairpin-helix motif LQF05_RS09470 PF00533 BRCA1 C Terminus (BRCT) domain LQF05_RS09470 PF03120 NAD-dependent DNA ligase OB-fold domain LQF05_RS09475 PF00700 Bacterial flagellin C-terminal helical region LQF05_RS09475 PF07196 Flagellin hook IN motif LQF05_RS09475 PF00669 Bacterial flagellin N-terminal helical region LQF05_RS09485 PF07196 Flagellin hook IN motif LQF05_RS09485 PF07195 Flagellar hook-associated protein 2 C-terminus LQF05_RS09485 PF02465 Flagellar hook-associated protein 2 N-terminus LQF05_RS09490 PF02561 Flagellar protein FliS LQF05_RS09500 PF06865 Pyrimidine/purine nucleoside phosphorylase LQF05_RS09510 PF03692 Putative zinc- or iron-chelating domain LQF05_RS09515 PF00285 Citrate synthase, C-terminal domain LQF05_RS09520 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LQF05_RS09525 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LQF05_RS09530 PF00890 FAD binding domain LQF05_RS09530 PF02910 Fumarate reductase flavoprotein C-term LQF05_RS09535 PF13085 2Fe-2S iron-sulfur cluster binding domain LQF05_RS09540 PF00676 Dehydrogenase E1 component LQF05_RS09540 PF16078 2-oxoglutarate dehydrogenase N-terminus LQF05_RS09540 PF16870 2-oxoglutarate dehydrogenase C-terminal LQF05_RS09540 PF02779 Transketolase, pyrimidine binding domain LQF05_RS09545 PF02817 e3 binding domain LQF05_RS09545 PF00364 Biotin-requiring enzyme LQF05_RS09545 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LQF05_RS09550 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQF05_RS09550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LQF05_RS09555 PF08442 ATP-grasp domain LQF05_RS09555 PF00549 CoA-ligase LQF05_RS09560 PF02629 CoA binding domain LQF05_RS09560 PF00549 CoA-ligase LQF05_RS09565 PF05525 Branched-chain amino acid transport protein LQF05_RS09590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS09590 PF00183 Hsp90 protein LQF05_RS09610 PF12729 Four helix bundle sensory module for signal transduction LQF05_RS09610 PF00672 HAMP domain LQF05_RS09610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS09615 PF12729 Four helix bundle sensory module for signal transduction LQF05_RS09615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS09615 PF00672 HAMP domain LQF05_RS09620 PF00375 Sodium:dicarboxylate symporter family LQF05_RS09625 PF00109 Beta-ketoacyl synthase, N-terminal domain LQF05_RS09625 PF02801 Beta-ketoacyl synthase, C-terminal domain LQF05_RS09630 PF07977 FabA-like domain LQF05_RS09635 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LQF05_RS09635 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LQF05_RS09650 PF03061 Thioesterase superfamily LQF05_RS09670 PF01594 AI-2E family transporter LQF05_RS09675 PF01734 Patatin-like phospholipase LQF05_RS09680 PF02769 AIR synthase related protein, C-terminal domain LQF05_RS09680 PF00586 AIR synthase related protein, N-terminal domain LQF05_RS09695 PF07726 ATPase family associated with various cellular activities (AAA) LQF05_RS09695 PF17863 AAA lid domain LQF05_RS09705 PF13559 Domain of unknown function (DUF4129) LQF05_RS09705 PF01841 Transglutaminase-like superfamily LQF05_RS09705 PF11992 Domain of unknown function (DUF3488) LQF05_RS09720 PF09335 SNARE associated Golgi protein LQF05_RS09730 PF00106 short chain dehydrogenase LQF05_RS09735 PF00108 Thiolase, N-terminal domain LQF05_RS09735 PF02803 Thiolase, C-terminal domain LQF05_RS09740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQF05_RS09740 PF02770 Acyl-CoA dehydrogenase, middle domain LQF05_RS09740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQF05_RS09745 PF00501 AMP-binding enzyme LQF05_RS09745 PF13193 AMP-binding enzyme C-terminal domain LQF05_RS09750 PF02515 CoA-transferase family III LQF05_RS09760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQF05_RS09760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQF05_RS09760 PF02770 Acyl-CoA dehydrogenase, middle domain LQF05_RS09765 PF00378 Enoyl-CoA hydratase/isomerase LQF05_RS09770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LQF05_RS09770 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LQF05_RS09775 PF00378 Enoyl-CoA hydratase/isomerase LQF05_RS09780 PF00171 Aldehyde dehydrogenase family LQF05_RS09800 PF03814 Potassium-transporting ATPase A subunit LQF05_RS09810 PF02669 K+-transporting ATPase, c chain LQF05_RS09815 PF13492 GAF domain LQF05_RS09815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS09815 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS09815 PF13493 Domain of unknown function (DUF4118) LQF05_RS09815 PF02702 Osmosensitive K+ channel His kinase sensor domain LQF05_RS09820 PF00072 Response regulator receiver domain LQF05_RS09820 PF00486 Transcriptional regulatory protein, C terminal LQF05_RS09825 PF00343 Carbohydrate phosphorylase LQF05_RS09825 PF11897 Protein of unknown function (DUF3417) LQF05_RS09840 PF12833 Helix-turn-helix domain LQF05_RS09855 PF08239 Bacterial SH3 domain LQF05_RS09860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS09860 PF13426 PAS domain LQF05_RS09860 PF00072 Response regulator receiver domain LQF05_RS09865 PF02386 Cation transport protein LQF05_RS09880 PF01568 Molydopterin dinucleotide binding domain LQF05_RS09880 PF00384 Molybdopterin oxidoreductase LQF05_RS09885 PF02634 FdhD/NarQ family LQF05_RS09890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS09890 PF03466 LysR substrate binding domain LQF05_RS09895 PF12833 Helix-turn-helix domain LQF05_RS09895 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LQF05_RS09900 PF08447 PAS fold LQF05_RS09900 PF05231 MASE1 LQF05_RS09900 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS09900 PF00563 EAL domain LQF05_RS09900 PF08448 PAS fold LQF05_RS09900 PF13426 PAS domain LQF05_RS09910 PF02333 Phytase LQF05_RS09915 PF01618 MotA/TolQ/ExbB proton channel family LQF05_RS09920 PF02472 Biopolymer transport protein ExbD/TolR LQF05_RS09935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS09935 PF13188 PAS domain LQF05_RS09935 PF08448 PAS fold LQF05_RS09935 PF00072 Response regulator receiver domain LQF05_RS09935 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS09940 PF12462 DNA helicase IV / RNA helicase N terminal LQF05_RS09940 PF00580 UvrD/REP helicase N-terminal domain LQF05_RS09940 PF13361 UvrD-like helicase C-terminal domain LQF05_RS09945 PF00069 Protein kinase domain LQF05_RS09955 PF04324 BFD-like [2Fe-2S] binding domain LQF05_RS09955 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LQF05_RS09955 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LQF05_RS09955 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQF05_RS09955 PF13806 Rieske-like [2Fe-2S] domain LQF05_RS09955 PF18267 Rubredoxin NAD+ reductase C-terminal domain LQF05_RS09960 PF18267 Rubredoxin NAD+ reductase C-terminal domain LQF05_RS09960 PF04324 BFD-like [2Fe-2S] binding domain LQF05_RS09960 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LQF05_RS09960 PF13806 Rieske-like [2Fe-2S] domain LQF05_RS09960 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQF05_RS09960 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LQF05_RS09965 PF02146 Sir2 family LQF05_RS09975 PF12729 Four helix bundle sensory module for signal transduction LQF05_RS09975 PF00672 HAMP domain LQF05_RS09975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS09995 PF00106 short chain dehydrogenase LQF05_RS10005 PF03441 FAD binding domain of DNA photolyase LQF05_RS10005 PF00875 DNA photolyase LQF05_RS10010 PF13411 MerR HTH family regulatory protein LQF05_RS10015 PF08349 Protein of unknown function (DUF1722) LQF05_RS10020 PF08338 Domain of unknown function (DUF1731) LQF05_RS10020 PF01370 NAD dependent epimerase/dehydratase family LQF05_RS10025 PF00762 Ferrochelatase LQF05_RS10030 PF00563 EAL domain LQF05_RS10030 PF03707 Bacterial signalling protein N terminal repeat LQF05_RS10030 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS10035 PF01740 STAS domain LQF05_RS10035 PF13426 PAS domain LQF05_RS10055 PF02152 Dihydroneopterin aldolase LQF05_RS10060 PF01227 GTP cyclohydrolase I LQF05_RS10070 PF13411 MerR HTH family regulatory protein LQF05_RS10075 PF05193 Peptidase M16 inactive domain LQF05_RS10075 PF00675 Insulinase (Peptidase family M16) LQF05_RS10090 PF00072 Response regulator receiver domain LQF05_RS10090 PF09456 RcsC Alpha-Beta-Loop (ABL) LQF05_RS10090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS10090 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS10095 PF13409 Glutathione S-transferase, N-terminal domain LQF05_RS10100 PF02885 Glycosyl transferase family, helical bundle domain LQF05_RS10100 PF00591 Glycosyl transferase family, a/b domain LQF05_RS10105 PF04358 DsrC like protein LQF05_RS10115 PF02635 DsrE/DsrF-like family LQF05_RS10120 PF02635 DsrE/DsrF-like family LQF05_RS10130 PF01027 Inhibitor of apoptosis-promoting Bax1 LQF05_RS10145 PF00440 Bacterial regulatory proteins, tetR family LQF05_RS10145 PF08361 MAATS-type transcriptional repressor, C-terminal region LQF05_RS10155 PF00120 Glutamine synthetase, catalytic domain LQF05_RS10160 PF00561 alpha/beta hydrolase fold LQF05_RS10165 PF00005 ABC transporter LQF05_RS10170 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS10180 PF00857 Isochorismatase family LQF05_RS10185 PF02633 Creatinine amidohydrolase LQF05_RS10210 PF09084 NMT1/THI5 like LQF05_RS10215 PF00248 Aldo/keto reductase family LQF05_RS10220 PF01425 Amidase LQF05_RS10225 PF18140 Propionyl-coenzyme A carboxylase BT domain LQF05_RS10225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LQF05_RS10225 PF00364 Biotin-requiring enzyme LQF05_RS10225 PF00289 Biotin carboxylase, N-terminal domain LQF05_RS10225 PF02785 Biotin carboxylase C-terminal domain LQF05_RS10235 PF09347 Domain of unknown function (DUF1989) LQF05_RS10240 PF08402 TOBE domain LQF05_RS10240 PF00005 ABC transporter LQF05_RS10250 PF00672 HAMP domain LQF05_RS10250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS10250 PF12729 Four helix bundle sensory module for signal transduction LQF05_RS10255 PF01026 TatD related DNase LQF05_RS10260 PF01464 Transglycosylase SLT domain LQF05_RS10260 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQF05_RS10265 PF03280 Proteobacterial lipase chaperone protein LQF05_RS10270 PF00561 alpha/beta hydrolase fold LQF05_RS10275 PF03449 Transcription elongation factor, N-terminal LQF05_RS10275 PF01272 Transcription elongation factor, GreA/GreB, C-term LQF05_RS10285 PF00005 ABC transporter LQF05_RS10290 PF13472 GDSL-like Lipase/Acylhydrolase family LQF05_RS10300 PF17969 L,D-transpeptidase C-terminal domain LQF05_RS10300 PF03734 L,D-transpeptidase catalytic domain LQF05_RS10305 PF11839 Alanine-zipper, major outer membrane lipoprotein LQF05_RS10315 PF00793 DAHP synthetase I family LQF05_RS10320 PF02558 Ketopantoate reductase PanE/ApbA LQF05_RS10320 PF08546 Ketopantoate reductase PanE/ApbA C terminal LQF05_RS10325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS10325 PF03466 LysR substrate binding domain LQF05_RS10330 PF01507 Phosphoadenosine phosphosulfate reductase family LQF05_RS10340 PF04715 Anthranilate synthase component I, N terminal region LQF05_RS10340 PF00425 chorismate binding enzyme LQF05_RS10360 PF07729 FCD domain LQF05_RS10360 PF00392 Bacterial regulatory proteins, gntR family LQF05_RS10370 PF00285 Citrate synthase, C-terminal domain LQF05_RS10375 PF00330 Aconitase family (aconitate hydratase) LQF05_RS10375 PF00694 Aconitase C-terminal domain LQF05_RS10380 PF04303 PrpF protein LQF05_RS10385 PF03618 Kinase/pyrophosphorylase LQF05_RS10390 PF00391 PEP-utilising enzyme, mobile domain LQF05_RS10390 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LQF05_RS10390 PF02896 PEP-utilising enzyme, TIM barrel domain LQF05_RS10395 PF03737 Aldolase/RraA LQF05_RS10400 PF01544 CorA-like Mg2+ transporter protein LQF05_RS10410 PF05552 Conserved TM helix LQF05_RS10420 PF05736 OprF membrane domain LQF05_RS10420 PF00691 OmpA family LQF05_RS10425 PF00330 Aconitase family (aconitate hydratase) LQF05_RS10425 PF06434 Aconitate hydratase 2 N-terminus LQF05_RS10425 PF11791 Aconitate B N-terminal domain LQF05_RS10440 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LQF05_RS10445 PF00149 Calcineurin-like phosphoesterase LQF05_RS10450 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LQF05_RS10455 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LQF05_RS10455 PF00749 tRNA synthetases class I (E and Q), catalytic domain LQF05_RS10460 PF09190 DALR domain LQF05_RS10460 PF01406 tRNA synthetases class I (C) catalytic domain LQF05_RS10465 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LQF05_RS10465 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LQF05_RS10485 PF07729 FCD domain LQF05_RS10485 PF00392 Bacterial regulatory proteins, gntR family LQF05_RS10495 PF05698 Bacterial trigger factor protein (TF) C-terminus LQF05_RS10495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQF05_RS10495 PF05697 Bacterial trigger factor protein (TF) LQF05_RS10500 PF00574 Clp protease LQF05_RS10505 PF06689 ClpX C4-type zinc finger LQF05_RS10505 PF07724 AAA domain (Cdc48 subfamily) LQF05_RS10505 PF10431 C-terminal, D2-small domain, of ClpB protein LQF05_RS10510 PF00004 ATPase family associated with various cellular activities (AAA) LQF05_RS10510 PF05362 Lon protease (S16) C-terminal proteolytic domain LQF05_RS10510 PF02190 ATP-dependent protease La (LON) substrate-binding domain LQF05_RS10515 PF00216 Bacterial DNA-binding protein LQF05_RS10520 PF09312 SurA N-terminal domain LQF05_RS10520 PF00639 PPIC-type PPIASE domain LQF05_RS10525 PF01180 Dihydroorotate dehydrogenase LQF05_RS10530 PF00266 Aminotransferase class-V LQF05_RS10540 PF13186 Iron-sulfur cluster-binding domain LQF05_RS10540 PF04055 Radical SAM superfamily LQF05_RS10545 PF05402 Coenzyme PQQ synthesis protein D (PqqD) LQF05_RS10555 PF00171 Aldehyde dehydrogenase family LQF05_RS10565 PF08042 PqqA family LQF05_RS10570 PF12706 Beta-lactamase superfamily domain LQF05_RS10575 PF03070 TENA/THI-4/PQQC family LQF05_RS10580 PF05402 Coenzyme PQQ synthesis protein D (PqqD) LQF05_RS10585 PF13186 Iron-sulfur cluster-binding domain LQF05_RS10585 PF04055 Radical SAM superfamily LQF05_RS10590 PF00326 Prolyl oligopeptidase family LQF05_RS10595 PF00465 Iron-containing alcohol dehydrogenase LQF05_RS10600 PF00989 PAS fold LQF05_RS10600 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS10600 PF18698 Histidine kinase sensor domain LQF05_RS10600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS10600 PF00672 HAMP domain LQF05_RS10615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQF05_RS10615 PF00529 HlyD membrane-fusion protein of T1SS LQF05_RS10620 PF00873 AcrB/AcrD/AcrF family LQF05_RS10630 PF00072 Response regulator receiver domain LQF05_RS10630 PF00196 Bacterial regulatory proteins, luxR family LQF05_RS10635 PF08459 UvrC Helix-hairpin-helix N-terminal LQF05_RS10635 PF02151 UvrB/uvrC motif LQF05_RS10635 PF01541 GIY-YIG catalytic domain LQF05_RS10640 PF01066 CDP-alcohol phosphatidyltransferase LQF05_RS10675 PF01758 Sodium Bile acid symporter family LQF05_RS10685 PF01022 Bacterial regulatory protein, arsR family LQF05_RS10690 PF03358 NADPH-dependent FMN reductase LQF05_RS10700 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LQF05_RS10705 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LQF05_RS10705 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LQF05_RS10730 PF09722 Protein of unknown function (DUF2384) LQF05_RS10745 PF08774 VRR-NUC domain LQF05_RS10745 PF18081 Fanconi anemia-associated nuclease SAP domain LQF05_RS10750 PF04055 Radical SAM superfamily LQF05_RS10750 PF06969 HemN C-terminal domain LQF05_RS10755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS10755 PF00672 HAMP domain LQF05_RS10760 PF00483 Nucleotidyl transferase LQF05_RS10765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LQF05_RS10770 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQF05_RS10770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LQF05_RS10780 PF14572 Phosphoribosyl synthetase-associated domain LQF05_RS10780 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LQF05_RS10790 PF09299 Mu transposase, C-terminal LQF05_RS10790 PF00665 Integrase core domain LQF05_RS10815 PF04851 Type III restriction enzyme, res subunit LQF05_RS10870 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS10870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS10870 PF00672 HAMP domain LQF05_RS10875 PF00486 Transcriptional regulatory protein, C terminal LQF05_RS10875 PF00072 Response regulator receiver domain LQF05_RS10880 PF03573 outer membrane porin, OprD family LQF05_RS10885 PF02321 Outer membrane efflux protein LQF05_RS10890 PF00529 HlyD membrane-fusion protein of T1SS LQF05_RS10890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQF05_RS10895 PF00873 AcrB/AcrD/AcrF family LQF05_RS10905 PF01545 Cation efflux family LQF05_RS10905 PF16916 Dimerisation domain of Zinc Transporter LQF05_RS10925 PF04632 Fusaric acid resistance protein family LQF05_RS10930 PF07869 Protein of unknown function (DUF1656) LQF05_RS10935 PF13533 Biotin-lipoyl like LQF05_RS10940 PF02321 Outer membrane efflux protein LQF05_RS10945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS10945 PF03466 LysR substrate binding domain LQF05_RS10960 PF00355 Rieske [2Fe-2S] domain LQF05_RS10970 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LQF05_RS10970 PF00205 Thiamine pyrophosphate enzyme, central domain LQF05_RS10970 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LQF05_RS10975 PF04679 ATP dependent DNA ligase C terminal region LQF05_RS10975 PF13298 DNA polymerase Ligase (LigD) LQF05_RS10975 PF01068 ATP dependent DNA ligase domain LQF05_RS10995 PF05974 Domain of unknown function (DUF892) LQF05_RS11000 PF12795 Mechanosensitive ion channel porin domain LQF05_RS11000 PF12794 Mechanosensitive ion channel inner membrane domain 1 LQF05_RS11000 PF00924 Mechanosensitive ion channel LQF05_RS11005 PF02464 Competence-damaged protein LQF05_RS11005 PF18146 Damage-inducible protein CinA KH domain LQF05_RS11005 PF00994 Probable molybdopterin binding domain LQF05_RS11010 PF08323 Starch synthase catalytic domain LQF05_RS11010 PF00534 Glycosyl transferases group 1 LQF05_RS11015 PF00128 Alpha amylase, catalytic domain LQF05_RS11015 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LQF05_RS11015 PF11941 Domain of unknown function (DUF3459) LQF05_RS11020 PF02446 4-alpha-glucanotransferase LQF05_RS11025 PF00128 Alpha amylase, catalytic domain LQF05_RS11035 PF00128 Alpha amylase, catalytic domain LQF05_RS11035 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LQF05_RS11040 PF08525 Opacity-associated protein A N-terminal motif LQF05_RS11040 PF01551 Peptidase family M23 LQF05_RS11040 PF01476 LysM domain LQF05_RS11050 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LQF05_RS11055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS11055 PF03466 LysR substrate binding domain LQF05_RS11060 PF13823 Alcohol dehydrogenase GroES-associated LQF05_RS11060 PF08240 Alcohol dehydrogenase GroES-like domain LQF05_RS11060 PF00107 Zinc-binding dehydrogenase LQF05_RS11070 PF03372 Endonuclease/Exonuclease/phosphatase family LQF05_RS11075 PF13091 PLD-like domain LQF05_RS11080 PF03706 Lysylphosphatidylglycerol synthase TM region LQF05_RS11085 PF00128 Alpha amylase, catalytic domain LQF05_RS11085 PF02806 Alpha amylase, C-terminal all-beta domain LQF05_RS11085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LQF05_RS11090 PF16657 Maltogenic Amylase, C-terminal domain LQF05_RS11090 PF00128 Alpha amylase, catalytic domain LQF05_RS11095 PF00128 Alpha amylase, catalytic domain LQF05_RS11095 PF11896 Domain of unknown function (DUF3416) LQF05_RS11105 PF04216 Protein involved in formate dehydrogenase formation LQF05_RS11110 PF01292 Prokaryotic cytochrome b561 LQF05_RS11115 PF13247 4Fe-4S dicluster domain LQF05_RS11115 PF12800 4Fe-4S binding domain LQF05_RS11115 PF09163 Formate dehydrogenase N, transmembrane LQF05_RS11125 PF04679 ATP dependent DNA ligase C terminal region LQF05_RS11125 PF01068 ATP dependent DNA ligase domain LQF05_RS11125 PF13298 DNA polymerase Ligase (LigD) LQF05_RS11130 PF02735 Ku70/Ku80 beta-barrel domain LQF05_RS11140 PF16197 Ketoacyl-synthetase C-terminal extension LQF05_RS11140 PF00109 Beta-ketoacyl synthase, N-terminal domain LQF05_RS11140 PF02801 Beta-ketoacyl synthase, C-terminal domain LQF05_RS11140 PF08659 KR domain LQF05_RS11140 PF00550 Phosphopantetheine attachment site LQF05_RS11140 PF14765 Polyketide synthase dehydratase LQF05_RS11140 PF00698 Acyl transferase domain LQF05_RS11140 PF08240 Alcohol dehydrogenase GroES-like domain LQF05_RS11145 PF03466 LysR substrate binding domain LQF05_RS11145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS11150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQF05_RS11155 PF00873 AcrB/AcrD/AcrF family LQF05_RS11160 PF02321 Outer membrane efflux protein LQF05_RS11165 PF13427 Domain of unknown function (DUF4111) LQF05_RS11165 PF01909 Nucleotidyltransferase domain LQF05_RS11175 PF03480 Bacterial extracellular solute-binding protein, family 7 LQF05_RS11180 PF02321 Outer membrane efflux protein LQF05_RS11185 PF00873 AcrB/AcrD/AcrF family LQF05_RS11190 PF00873 AcrB/AcrD/AcrF family LQF05_RS11195 PF13533 Biotin-lipoyl like LQF05_RS11200 PF03023 Lipid II flippase MurJ LQF05_RS11210 PF08534 Redoxin LQF05_RS11215 PF01235 Sodium:alanine symporter family LQF05_RS11220 PF04357 TamB, inner membrane protein subunit of TAM complex LQF05_RS11225 PF01103 Surface antigen LQF05_RS11225 PF17243 POTRA domain TamA domain 1 LQF05_RS11225 PF07244 Surface antigen variable number repeat LQF05_RS11235 PF03372 Endonuclease/Exonuclease/phosphatase family LQF05_RS11240 PF12849 PBP superfamily domain LQF05_RS11245 PF00294 pfkB family carbohydrate kinase LQF05_RS11260 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS11265 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS11270 PF00005 ABC transporter LQF05_RS11270 PF17912 MalK OB fold domain LQF05_RS11275 PF01232 Mannitol dehydrogenase Rossmann domain LQF05_RS11275 PF08125 Mannitol dehydrogenase C-terminal domain LQF05_RS11280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LQF05_RS11280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LQF05_RS11285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQF05_RS11285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQF05_RS11285 PF02770 Acyl-CoA dehydrogenase, middle domain LQF05_RS11290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS11290 PF03466 LysR substrate binding domain LQF05_RS11295 PF00356 Bacterial regulatory proteins, lacI family LQF05_RS11300 PF03480 Bacterial extracellular solute-binding protein, family 7 LQF05_RS11305 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LQF05_RS11320 PF03969 AFG1-like ATPase LQF05_RS11325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS11325 PF03466 LysR substrate binding domain LQF05_RS11330 PF01266 FAD dependent oxidoreductase LQF05_RS11340 PF00593 TonB dependent receptor LQF05_RS11340 PF07715 TonB-dependent Receptor Plug Domain LQF05_RS11345 PF12848 ABC transporter LQF05_RS11345 PF00005 ABC transporter LQF05_RS11350 PF02673 Bacitracin resistance protein BacA LQF05_RS11355 PF00672 HAMP domain LQF05_RS11355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS11355 PF17200 Single Cache domain 2 LQF05_RS11370 PF04239 Protein of unknown function (DUF421) LQF05_RS11385 PF05230 MASE2 domain LQF05_RS11385 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS11390 PF00072 Response regulator receiver domain LQF05_RS11395 PF01106 NifU-like domain LQF05_RS11395 PF01521 Iron-sulphur cluster biosynthesis LQF05_RS11405 PF02607 B12 binding domain LQF05_RS11405 PF02310 B12 binding domain LQF05_RS11405 PF00809 Pterin binding enzyme LQF05_RS11405 PF02965 Vitamin B12 dependent methionine synthase, activation domain LQF05_RS11405 PF02574 Homocysteine S-methyltransferase LQF05_RS11415 PF01757 Acyltransferase family LQF05_RS11440 PF07690 Major Facilitator Superfamily LQF05_RS11445 PF04055 Radical SAM superfamily LQF05_RS11460 PF00011 Hsp20/alpha crystallin family LQF05_RS11470 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LQF05_RS11470 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LQF05_RS11480 PF08240 Alcohol dehydrogenase GroES-like domain LQF05_RS11480 PF00107 Zinc-binding dehydrogenase LQF05_RS11485 PF01343 Peptidase family S49 LQF05_RS11485 PF08496 Peptidase family S49 N-terminal LQF05_RS11515 PF01925 Sulfite exporter TauE/SafE LQF05_RS11520 PF00293 NUDIX domain LQF05_RS11520 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LQF05_RS11520 PF09297 NADH pyrophosphatase zinc ribbon domain LQF05_RS11530 PF00378 Enoyl-CoA hydratase/isomerase LQF05_RS11535 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LQF05_RS11535 PF01276 Orn/Lys/Arg decarboxylase, major domain LQF05_RS11535 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LQF05_RS11540 PF00929 Exonuclease LQF05_RS11545 PF00075 RNase H LQF05_RS11555 PF16123 Hydroxyacylglutathione hydrolase C-terminus LQF05_RS11555 PF00753 Metallo-beta-lactamase superfamily LQF05_RS11560 PF01476 LysM domain LQF05_RS11560 PF01464 Transglycosylase SLT domain LQF05_RS11570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LQF05_RS11575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LQF05_RS11580 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS11585 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS11585 PF12911 N-terminal TM domain of oligopeptide transport permease C LQF05_RS11590 PF00005 ABC transporter LQF05_RS11590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LQF05_RS11605 PF12833 Helix-turn-helix domain LQF05_RS11610 PF01011 PQQ enzyme repeat LQF05_RS11610 PF13360 PQQ-like domain LQF05_RS11620 PF16123 Hydroxyacylglutathione hydrolase C-terminus LQF05_RS11620 PF00753 Metallo-beta-lactamase superfamily LQF05_RS11630 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQF05_RS11630 PF01464 Transglycosylase SLT domain LQF05_RS11635 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LQF05_RS11640 PF13360 PQQ-like domain LQF05_RS11640 PF01011 PQQ enzyme repeat LQF05_RS11650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS11650 PF13426 PAS domain LQF05_RS11650 PF08447 PAS fold LQF05_RS11665 PF00072 Response regulator receiver domain LQF05_RS11665 PF00196 Bacterial regulatory proteins, luxR family LQF05_RS11670 PF07730 Histidine kinase LQF05_RS11670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS11670 PF05231 MASE1 LQF05_RS11680 PF00672 HAMP domain LQF05_RS11680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS11700 PF00005 ABC transporter LQF05_RS11715 PF00196 Bacterial regulatory proteins, luxR family LQF05_RS11715 PF00072 Response regulator receiver domain LQF05_RS11720 PF14824 Sirohaem biosynthesis protein central LQF05_RS11720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LQF05_RS11720 PF10414 Sirohaem synthase dimerisation region LQF05_RS11725 PF02403 Seryl-tRNA synthetase N-terminal domain LQF05_RS11725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LQF05_RS11730 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LQF05_RS11735 PF00004 ATPase family associated with various cellular activities (AAA) LQF05_RS11735 PF16193 AAA C-terminal domain LQF05_RS11735 PF12002 MgsA AAA+ ATPase C terminal LQF05_RS11740 PF03548 Outer membrane lipoprotein carrier protein LolA LQF05_RS11745 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LQF05_RS11745 PF17854 FtsK alpha domain LQF05_RS11745 PF09397 Ftsk gamma domain LQF05_RS11745 PF01580 FtsK/SpoIIIE family LQF05_RS11750 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQF05_RS11755 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LQF05_RS11760 PF04377 Arginine-tRNA-protein transferase, C terminus LQF05_RS11760 PF04376 Arginine-tRNA-protein transferase, N terminus LQF05_RS11765 PF01176 Translation initiation factor 1A / IF-1 LQF05_RS11770 PF10431 C-terminal, D2-small domain, of ClpB protein LQF05_RS11770 PF17871 AAA lid domain LQF05_RS11770 PF07724 AAA domain (Cdc48 subfamily) LQF05_RS11770 PF00004 ATPase family associated with various cellular activities (AAA) LQF05_RS11770 PF02861 Clp amino terminal domain, pathogenicity island component LQF05_RS11775 PF02617 ATP-dependent Clp protease adaptor protein ClpS LQF05_RS11780 PF00313 'Cold-shock' DNA-binding domain LQF05_RS11785 PF00180 Isocitrate/isopropylmalate dehydrogenase LQF05_RS11790 PF03971 Monomeric isocitrate dehydrogenase LQF05_RS11795 PF00293 NUDIX domain LQF05_RS11805 PF04356 Protein of unknown function (DUF489) LQF05_RS11810 PF08328 Adenylosuccinate lyase C-terminal LQF05_RS11810 PF00206 Lyase LQF05_RS11815 PF08007 Cupin superfamily protein LQF05_RS11820 PF13673 Acetyltransferase (GNAT) domain LQF05_RS11835 PF00463 Isocitrate lyase family LQF05_RS11845 PF01594 AI-2E family transporter LQF05_RS11850 PF03553 Na+/H+ antiporter family LQF05_RS11850 PF13726 Na+-H+ antiporter family LQF05_RS11855 PF01242 6-pyruvoyl tetrahydropterin synthase LQF05_RS11885 PF01979 Amidohydrolase family LQF05_RS11895 PF13419 Haloacid dehalogenase-like hydrolase LQF05_RS11900 PF00106 short chain dehydrogenase LQF05_RS11905 PF01479 S4 domain LQF05_RS11905 PF00849 RNA pseudouridylate synthase LQF05_RS11910 PF01081 KDPG and KHG aldolase LQF05_RS11915 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LQF05_RS11920 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LQF05_RS11920 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LQF05_RS11925 PF05175 Methyltransferase small domain LQF05_RS11935 PF01713 Smr domain LQF05_RS11940 PF01227 GTP cyclohydrolase I LQF05_RS11945 PF02798 Glutathione S-transferase, N-terminal domain LQF05_RS11950 PF00155 Aminotransferase class I and II LQF05_RS11960 PF00575 S1 RNA binding domain LQF05_RS11965 PF02224 Cytidylate kinase LQF05_RS11970 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LQF05_RS11975 PF00155 Aminotransferase class I and II LQF05_RS11980 PF00800 Prephenate dehydratase LQF05_RS11980 PF01817 Chorismate mutase type II LQF05_RS11980 PF01842 ACT domain LQF05_RS11985 PF00266 Aminotransferase class-V LQF05_RS11990 PF03989 DNA gyrase C-terminal domain, beta-propeller LQF05_RS11990 PF00521 DNA gyrase/topoisomerase IV, subunit A LQF05_RS11995 PF01008 Initiation factor 2 subunit family LQF05_RS12010 PF02811 PHP domain LQF05_RS12010 PF14579 Helix-hairpin-helix motif LQF05_RS12010 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LQF05_RS12010 PF01336 OB-fold nucleic acid binding domain LQF05_RS12010 PF07733 Bacterial DNA polymerase III alpha NTPase domain LQF05_RS12020 PF08401 Domain of unknown function (DUF1738) LQF05_RS12020 PF13362 Toprim domain LQF05_RS12020 PF18818 Metallopeptidase superfamily domain LQF05_RS12025 PF00291 Pyridoxal-phosphate dependent enzyme LQF05_RS12030 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQF05_RS12035 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS12040 PF00005 ABC transporter LQF05_RS12045 PF00296 Luciferase-like monooxygenase LQF05_RS12050 PF02254 TrkA-N domain LQF05_RS12050 PF00999 Sodium/hydrogen exchanger family LQF05_RS12075 PF00072 Response regulator receiver domain LQF05_RS12075 PF00486 Transcriptional regulatory protein, C terminal LQF05_RS12090 PF00216 Bacterial DNA-binding protein LQF05_RS12095 PF03483 B3/4 domain LQF05_RS12095 PF03484 tRNA synthetase B5 domain LQF05_RS12095 PF03147 Ferredoxin-fold anticodon binding domain LQF05_RS12095 PF01588 Putative tRNA binding domain LQF05_RS12095 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LQF05_RS12100 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LQF05_RS12100 PF01409 tRNA synthetases class II core domain (F) LQF05_RS12105 PF00453 Ribosomal protein L20 LQF05_RS12110 PF01632 Ribosomal protein L35 LQF05_RS12115 PF00707 Translation initiation factor IF-3, C-terminal domain LQF05_RS12115 PF05198 Translation initiation factor IF-3, N-terminal domain LQF05_RS12120 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LQF05_RS12120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LQF05_RS12120 PF02824 TGS domain LQF05_RS12120 PF03129 Anticodon binding domain LQF05_RS12130 PF01266 FAD dependent oxidoreductase LQF05_RS12155 PF12804 MobA-like NTP transferase domain LQF05_RS12175 PF03573 outer membrane porin, OprD family LQF05_RS12195 PF01966 HD domain LQF05_RS12205 PF04320 Protein with unknown function (DUF469) LQF05_RS12210 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LQF05_RS12215 PF10672 S-adenosylmethionine-dependent methyltransferase LQF05_RS12215 PF02926 THUMP domain LQF05_RS12215 PF01170 Putative RNA methylase family UPF0020 LQF05_RS12220 PF04957 Ribosome modulation factor LQF05_RS12225 PF01180 Dihydroorotate dehydrogenase LQF05_RS12240 PF05088 Bacterial NAD-glutamate dehydrogenase LQF05_RS12245 PF07726 ATPase family associated with various cellular activities (AAA) LQF05_RS12245 PF17863 AAA lid domain LQF05_RS12250 PF01882 Protein of unknown function DUF58 LQF05_RS12280 PF03861 ANTAR domain LQF05_RS12280 PF08376 Nitrate and nitrite sensing LQF05_RS12295 PF00294 pfkB family carbohydrate kinase LQF05_RS12300 PF07690 Major Facilitator Superfamily LQF05_RS12305 PF00069 Protein kinase domain LQF05_RS12305 PF03793 PASTA domain LQF05_RS12315 PF18267 Rubredoxin NAD+ reductase C-terminal domain LQF05_RS12315 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQF05_RS12315 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LQF05_RS12315 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LQF05_RS12315 PF04324 BFD-like [2Fe-2S] binding domain LQF05_RS12320 PF00355 Rieske [2Fe-2S] domain LQF05_RS12325 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LQF05_RS12325 PF04324 BFD-like [2Fe-2S] binding domain LQF05_RS12325 PF00384 Molybdopterin oxidoreductase LQF05_RS12325 PF01568 Molydopterin dinucleotide binding domain LQF05_RS12330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LQF05_RS12340 PF14870 Photosynthesis system II assembly factor YCF48 LQF05_RS12345 PF01433 Peptidase family M1 domain LQF05_RS12345 PF11940 Domain of unknown function (DUF3458) Ig-like fold LQF05_RS12345 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LQF05_RS12360 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease LQF05_RS12360 PF01694 Rhomboid family LQF05_RS12365 PF00149 Calcineurin-like phosphoesterase LQF05_RS12370 PF01513 ATP-NAD kinase LQF05_RS12385 PF01925 Sulfite exporter TauE/SafE LQF05_RS12390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS12390 PF03466 LysR substrate binding domain LQF05_RS12400 PF17284 Spermidine synthase tetramerisation domain LQF05_RS12405 PF12833 Helix-turn-helix domain LQF05_RS12405 PF00730 HhH-GPD superfamily base excision DNA repair protein LQF05_RS12405 PF06029 AlkA N-terminal domain LQF05_RS12405 PF02805 Metal binding domain of Ada LQF05_RS12425 PF03079 ARD/ARD' family LQF05_RS12435 PF12832 MFS_1 like family LQF05_RS12440 PF01264 Chorismate synthase LQF05_RS12455 PF02264 LamB porin LQF05_RS12460 PF00005 ABC transporter LQF05_RS12460 PF08402 TOBE domain LQF05_RS12465 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS12470 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS12475 PF01547 Bacterial extracellular solute-binding protein LQF05_RS12480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS12480 PF00672 HAMP domain LQF05_RS12480 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS12485 PF00072 Response regulator receiver domain LQF05_RS12485 PF00486 Transcriptional regulatory protein, C terminal LQF05_RS12490 PF02685 Glucokinase LQF05_RS12495 PF00920 Dehydratase family LQF05_RS12500 PF04079 Segregation and condensation complex subunit ScpB LQF05_RS12505 PF02616 Segregation and condensation protein ScpA LQF05_RS12510 PF00579 tRNA synthetases class I (W and Y) LQF05_RS12515 PF01300 Telomere recombination LQF05_RS12520 PF02811 PHP domain LQF05_RS12525 PF03795 YCII-related domain LQF05_RS12535 PF00072 Response regulator receiver domain LQF05_RS12535 PF00486 Transcriptional regulatory protein, C terminal LQF05_RS12545 PF16750 Sensor domain of 2-component histidine kinase LQF05_RS12545 PF00672 HAMP domain LQF05_RS12545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS12545 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS12550 PF00881 Nitroreductase family LQF05_RS12555 PF03692 Putative zinc- or iron-chelating domain LQF05_RS12560 PF02386 Cation transport protein LQF05_RS12565 PF05661 Protein of unknown function (DUF808) LQF05_RS12570 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LQF05_RS12570 PF12833 Helix-turn-helix domain LQF05_RS12580 PF00211 Adenylate and Guanylate cyclase catalytic domain LQF05_RS12585 PF12852 Cupin LQF05_RS12585 PF12833 Helix-turn-helix domain LQF05_RS12600 PF01734 Patatin-like phospholipase LQF05_RS12610 PF00570 HRDC domain LQF05_RS12610 PF16124 RecQ zinc-binding LQF05_RS12610 PF09382 RQC domain LQF05_RS12610 PF00271 Helicase conserved C-terminal domain LQF05_RS12610 PF00270 DEAD/DEAH box helicase LQF05_RS12620 PF04304 Protein of unknown function (DUF454) LQF05_RS12640 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LQF05_RS12650 PF00291 Pyridoxal-phosphate dependent enzyme LQF05_RS12660 PF00004 ATPase family associated with various cellular activities (AAA) LQF05_RS12660 PF10431 C-terminal, D2-small domain, of ClpB protein LQF05_RS12660 PF07724 AAA domain (Cdc48 subfamily) LQF05_RS12660 PF02861 Clp amino terminal domain, pathogenicity island component LQF05_RS12660 PF17871 AAA lid domain LQF05_RS12680 PF13230 Glutamine amidotransferases class-II LQF05_RS12690 PF00582 Universal stress protein family LQF05_RS12700 PF16326 ABC transporter C-terminal domain LQF05_RS12700 PF12848 ABC transporter LQF05_RS12700 PF00005 ABC transporter LQF05_RS12705 PF01464 Transglycosylase SLT domain LQF05_RS12705 PF14718 Soluble lytic murein transglycosylase L domain LQF05_RS12710 PF00111 2Fe-2S iron-sulfur cluster binding domain LQF05_RS12710 PF03476 MOSC N-terminal beta barrel domain LQF05_RS12710 PF03473 MOSC domain LQF05_RS12715 PF00072 Response regulator receiver domain LQF05_RS12720 PF00781 Diacylglycerol kinase catalytic domain LQF05_RS12725 PF02397 Bacterial sugar transferase LQF05_RS12730 PF01451 Low molecular weight phosphotyrosine protein phosphatase LQF05_RS12735 PF13614 AAA domain LQF05_RS12735 PF13807 G-rich domain on putative tyrosine kinase LQF05_RS12735 PF02706 Chain length determinant protein LQF05_RS12740 PF00553 Cellulose binding domain LQF05_RS12740 PF00150 Cellulase (glycosyl hydrolase family 5) LQF05_RS12770 PF03808 Glycosyl transferase WecB/TagA/CpsF family LQF05_RS12775 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LQF05_RS12775 PF10531 SLBB domain LQF05_RS12775 PF02563 Polysaccharide biosynthesis/export protein LQF05_RS12780 PF02803 Thiolase, C-terminal domain LQF05_RS12780 PF00108 Thiolase, N-terminal domain LQF05_RS12785 PF03976 Polyphosphate kinase 2 (PPK2) LQF05_RS12790 PF01648 4'-phosphopantetheinyl transferase superfamily LQF05_RS12790 PF17837 4'-phosphopantetheinyl transferase N-terminal domain LQF05_RS12800 PF02719 Polysaccharide biosynthesis protein LQF05_RS12805 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LQF05_RS12815 PF02397 Bacterial sugar transferase LQF05_RS12855 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LQF05_RS12860 PF00132 Bacterial transferase hexapeptide (six repeats) LQF05_RS12865 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LQF05_RS12865 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LQF05_RS12870 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LQF05_RS12870 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LQF05_RS12870 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LQF05_RS12880 PF00216 Bacterial DNA-binding protein LQF05_RS12885 PF03880 DbpA RNA binding domain LQF05_RS12885 PF00270 DEAD/DEAH box helicase LQF05_RS12885 PF00271 Helicase conserved C-terminal domain LQF05_RS12890 PF02743 Cache domain LQF05_RS12890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS12890 PF00672 HAMP domain LQF05_RS12900 PF01474 Class-II DAHP synthetase family LQF05_RS12905 PF00939 Sodium:sulfate symporter transmembrane region LQF05_RS12910 PF09285 Elongation factor P, C-terminal LQF05_RS12910 PF08207 Elongation factor P (EF-P) KOW-like domain LQF05_RS12910 PF01132 Elongation factor P (EF-P) OB domain LQF05_RS12930 PF00589 Phage integrase family LQF05_RS12930 PF02899 Phage integrase, N-terminal SAM-like domain LQF05_RS12935 PF02796 Helix-turn-helix domain of resolvase LQF05_RS12935 PF00239 Resolvase, N terminal domain LQF05_RS12965 PF00075 RNase H LQF05_RS12970 PF02899 Phage integrase, N-terminal SAM-like domain LQF05_RS12970 PF00589 Phage integrase family LQF05_RS12980 PF01593 Flavin containing amine oxidoreductase LQF05_RS12985 PF01618 MotA/TolQ/ExbB proton channel family LQF05_RS12990 PF00691 OmpA family LQF05_RS12990 PF13677 Membrane MotB of proton-channel complex MotA/MotB LQF05_RS12995 PF02535 ZIP Zinc transporter LQF05_RS13005 PF12704 MacB-like periplasmic core domain LQF05_RS13005 PF02687 FtsX-like permease family LQF05_RS13010 PF00005 ABC transporter LQF05_RS13015 PF00753 Metallo-beta-lactamase superfamily LQF05_RS13020 PF04273 Putative phosphatase (DUF442) LQF05_RS13020 PF00753 Metallo-beta-lactamase superfamily LQF05_RS13025 PF00916 Sulfate permease family LQF05_RS13025 PF01740 STAS domain LQF05_RS13045 PF04143 Sulphur transport LQF05_RS13085 PF00255 Glutathione peroxidase LQF05_RS13090 PF01641 SelR domain LQF05_RS13095 PF00155 Aminotransferase class I and II LQF05_RS13105 PF01435 Peptidase family M48 LQF05_RS13115 PF05724 Thiopurine S-methyltransferase (TPMT) LQF05_RS13120 PF02954 Bacterial regulatory protein, Fis family LQF05_RS13120 PF00158 Sigma-54 interaction domain LQF05_RS13120 PF00072 Response regulator receiver domain LQF05_RS13125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS13125 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS13125 PF13188 PAS domain LQF05_RS13130 PF00158 Sigma-54 interaction domain LQF05_RS13130 PF02954 Bacterial regulatory protein, Fis family LQF05_RS13130 PF06490 Flagellar regulatory protein FleQ LQF05_RS13150 PF03918 Cytochrome C biogenesis protein LQF05_RS13155 PF08534 Redoxin LQF05_RS13160 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LQF05_RS13160 PF01578 Cytochrome C assembly protein LQF05_RS13165 PF03100 CcmE LQF05_RS13170 PF04995 Heme exporter protein D (CcmD) LQF05_RS13175 PF01578 Cytochrome C assembly protein LQF05_RS13180 PF03379 CcmB protein LQF05_RS13185 PF00005 ABC transporter LQF05_RS13195 PF01312 FlhB HrpN YscU SpaS Family LQF05_RS13210 PF01584 CheW-like domain LQF05_RS13220 PF13614 AAA domain LQF05_RS13225 PF00691 OmpA family LQF05_RS13225 PF13677 Membrane MotB of proton-channel complex MotA/MotB LQF05_RS13230 PF01618 MotA/TolQ/ExbB proton channel family LQF05_RS13235 PF01339 CheB methylesterase LQF05_RS13235 PF00072 Response regulator receiver domain LQF05_RS13240 PF02895 Signal transducing histidine kinase, homodimeric domain LQF05_RS13240 PF01627 Hpt domain LQF05_RS13240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS13240 PF01584 CheW-like domain LQF05_RS13240 PF00072 Response regulator receiver domain LQF05_RS13245 PF04344 Chemotaxis phosphatase, CheZ LQF05_RS13250 PF00072 Response regulator receiver domain LQF05_RS13255 PF04542 Sigma-70 region 2 LQF05_RS13255 PF04539 Sigma-70 region 3 LQF05_RS13255 PF04545 Sigma-70, region 4 LQF05_RS13260 PF10609 NUBPL iron-transfer P-loop NTPase LQF05_RS13265 PF00448 SRP54-type protein, GTPase domain LQF05_RS13270 PF00771 FHIPEP family LQF05_RS13275 PF00080 Copper/zinc superoxide dismutase (SODC) LQF05_RS13280 PF01312 FlhB HrpN YscU SpaS Family LQF05_RS13285 PF01311 Bacterial export proteins, family 1 LQF05_RS13290 PF01313 Bacterial export proteins, family 3 LQF05_RS13295 PF00813 FliP family LQF05_RS13300 PF04347 Flagellar biosynthesis protein, FliO LQF05_RS13305 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LQF05_RS13310 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LQF05_RS13310 PF02154 Flagellar motor switch protein FliM LQF05_RS13330 PF00072 Response regulator receiver domain LQF05_RS13330 PF00486 Transcriptional regulatory protein, C terminal LQF05_RS13335 PF13466 STAS domain LQF05_RS13345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LQF05_RS13345 PF18269 T3SS EscN ATPase C-terminal domain LQF05_RS13355 PF01706 FliG C-terminal domain LQF05_RS13355 PF14841 FliG middle domain LQF05_RS13355 PF14842 FliG N-terminal domain LQF05_RS13360 PF01514 Secretory protein of YscJ/FliF family LQF05_RS13360 PF08345 Flagellar M-ring protein C-terminal LQF05_RS13365 PF02049 Flagellar hook-basal body complex protein FliE LQF05_RS13370 PF03594 Benzoate membrane transport protein LQF05_RS13385 PF00376 MerR family regulatory protein LQF05_RS13385 PF09278 MerR, DNA binding LQF05_RS13410 PF13411 MerR HTH family regulatory protein LQF05_RS13415 PF01136 Peptidase family U32 LQF05_RS13415 PF12392 Collagenase LQF05_RS13420 PF00672 HAMP domain LQF05_RS13420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS13420 PF17200 Single Cache domain 2 LQF05_RS13435 PF07885 Ion channel LQF05_RS13440 PF03880 DbpA RNA binding domain LQF05_RS13440 PF00270 DEAD/DEAH box helicase LQF05_RS13440 PF00271 Helicase conserved C-terminal domain LQF05_RS13450 PF00230 Major intrinsic protein LQF05_RS13455 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LQF05_RS13455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LQF05_RS13460 PF08220 DeoR-like helix-turn-helix domain LQF05_RS13460 PF00455 DeoR C terminal sensor domain LQF05_RS13465 PF01266 FAD dependent oxidoreductase LQF05_RS13465 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LQF05_RS13470 PF02690 Na+/Pi-cotransporter LQF05_RS13480 PF12849 PBP superfamily domain LQF05_RS13485 PF05698 Bacterial trigger factor protein (TF) C-terminus LQF05_RS13490 PF00672 HAMP domain LQF05_RS13490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS13520 PF00459 Inositol monophosphatase family LQF05_RS13535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LQF05_RS13545 PF13286 Phosphohydrolase-associated domain LQF05_RS13545 PF01966 HD domain LQF05_RS13555 PF03473 MOSC domain LQF05_RS13555 PF03475 3-alpha domain LQF05_RS13565 PF00892 EamA-like transporter family LQF05_RS13570 PF01709 Transcriptional regulator LQF05_RS13575 PF01844 HNH endonuclease LQF05_RS13580 PF00582 Universal stress protein family LQF05_RS13590 PF01725 Ham1 family LQF05_RS13605 PF00474 Sodium:solute symporter family LQF05_RS13620 PF04542 Sigma-70 region 2 LQF05_RS13620 PF04539 Sigma-70 region 3 LQF05_RS13620 PF04545 Sigma-70, region 4 LQF05_RS13620 PF00140 Sigma-70 factor, region 1.2 LQF05_RS13625 PF01476 LysM domain LQF05_RS13625 PF01551 Peptidase family M23 LQF05_RS13640 PF01975 Survival protein SurE LQF05_RS13645 PF01142 tRNA pseudouridine synthase D (TruD) LQF05_RS13650 PF02542 YgbB family LQF05_RS13660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQF05_RS13665 PF00756 Putative esterase LQF05_RS13670 PF08240 Alcohol dehydrogenase GroES-like domain LQF05_RS13670 PF00107 Zinc-binding dehydrogenase LQF05_RS13675 PF03466 LysR substrate binding domain LQF05_RS13675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS13690 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LQF05_RS13695 PF04977 Septum formation initiator LQF05_RS13700 PF00113 Enolase, C-terminal TIM barrel domain LQF05_RS13700 PF03952 Enolase, N-terminal domain LQF05_RS13705 PF00793 DAHP synthetase I family LQF05_RS13710 PF00117 Glutamine amidotransferase class-I LQF05_RS13710 PF06418 CTP synthase N-terminus LQF05_RS13715 PF09179 TilS substrate binding domain LQF05_RS13715 PF11734 TilS substrate C-terminal domain LQF05_RS13715 PF01171 PP-loop family LQF05_RS13720 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LQF05_RS13725 PF07733 Bacterial DNA polymerase III alpha NTPase domain LQF05_RS13725 PF01336 OB-fold nucleic acid binding domain LQF05_RS13725 PF02811 PHP domain LQF05_RS13725 PF14579 Helix-hairpin-helix motif LQF05_RS13725 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LQF05_RS13730 PF01351 Ribonuclease HII LQF05_RS13735 PF02684 Lipid-A-disaccharide synthetase LQF05_RS13740 PF00132 Bacterial transferase hexapeptide (six repeats) LQF05_RS13740 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LQF05_RS13745 PF07977 FabA-like domain LQF05_RS13750 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LQF05_RS13750 PF00132 Bacterial transferase hexapeptide (six repeats) LQF05_RS13755 PF03938 Outer membrane protein (OmpH-like) LQF05_RS13760 PF07244 Surface antigen variable number repeat LQF05_RS13760 PF01103 Surface antigen LQF05_RS13765 PF13180 PDZ domain LQF05_RS13765 PF17820 PDZ domain LQF05_RS13765 PF02163 Peptidase family M50 LQF05_RS13770 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LQF05_RS13770 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LQF05_RS13770 PF13288 DXP reductoisomerase C-terminal domain LQF05_RS13780 PF01255 Putative undecaprenyl diphosphate synthase LQF05_RS13785 PF01765 Ribosome recycling factor LQF05_RS13790 PF00696 Amino acid kinase family LQF05_RS13795 PF00889 Elongation factor TS LQF05_RS13800 PF00318 Ribosomal protein S2 LQF05_RS13805 PF00557 Metallopeptidase family M24 LQF05_RS13810 PF01842 ACT domain LQF05_RS13810 PF08335 GlnD PII-uridylyltransferase LQF05_RS13810 PF01966 HD domain LQF05_RS13810 PF01909 Nucleotidyltransferase domain LQF05_RS13815 PF03334 Na+/H+ antiporter subunit LQF05_RS13820 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LQF05_RS13825 PF01899 Na+/H+ ion antiporter subunit LQF05_RS13830 PF00361 Proton-conducting membrane transporter LQF05_RS13835 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LQF05_RS13840 PF00361 Proton-conducting membrane transporter LQF05_RS13840 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LQF05_RS13840 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LQF05_RS13840 PF13244 Domain of unknown function (DUF4040) LQF05_RS13855 PF01243 Pyridoxamine 5'-phosphate oxidase LQF05_RS13855 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LQF05_RS13860 PF04972 BON domain LQF05_RS13860 PF00691 OmpA family LQF05_RS13865 PF00144 Beta-lactamase LQF05_RS13870 PF13307 Helicase C-terminal domain LQF05_RS13870 PF06733 DEAD_2 LQF05_RS13880 PF00691 OmpA family LQF05_RS13880 PF05736 OprF membrane domain LQF05_RS13890 PF02810 SEC-C motif LQF05_RS13895 PF00970 Oxidoreductase FAD-binding domain LQF05_RS13895 PF00175 Oxidoreductase NAD-binding domain LQF05_RS13900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS13900 PF03466 LysR substrate binding domain LQF05_RS13905 PF00196 Bacterial regulatory proteins, luxR family LQF05_RS13905 PF00072 Response regulator receiver domain LQF05_RS13910 PF00892 EamA-like transporter family LQF05_RS13915 PF03942 DTW domain LQF05_RS13925 PF09363 XFP C-terminal domain LQF05_RS13925 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase LQF05_RS13925 PF09364 XFP N-terminal domain LQF05_RS13930 PF10996 Beta-Casp domain LQF05_RS13930 PF00753 Metallo-beta-lactamase superfamily LQF05_RS13930 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LQF05_RS13940 PF02631 RecX family LQF05_RS13945 PF00154 recA bacterial DNA recombination protein LQF05_RS13950 PF02464 Competence-damaged protein LQF05_RS13960 PF05190 MutS family domain IV LQF05_RS13960 PF05192 MutS domain III LQF05_RS13960 PF05188 MutS domain II LQF05_RS13960 PF01624 MutS domain I LQF05_RS13960 PF00488 MutS domain V LQF05_RS13965 PF00037 4Fe-4S binding domain LQF05_RS13965 PF11953 Domain of unknown function (DUF3470) LQF05_RS13985 PF13579 Glycosyl transferase 4-like domain LQF05_RS13985 PF00534 Glycosyl transferases group 1 LQF05_RS13990 PF03631 Virulence factor BrkB LQF05_RS13995 PF07724 AAA domain (Cdc48 subfamily) LQF05_RS13995 PF10431 C-terminal, D2-small domain, of ClpB protein LQF05_RS14000 PF00795 Carbon-nitrogen hydrolase LQF05_RS14010 PF03069 Acetamidase/Formamidase family LQF05_RS14015 PF00005 ABC transporter LQF05_RS14020 PF00005 ABC transporter LQF05_RS14030 PF02653 Branched-chain amino acid transport system / permease component LQF05_RS14030 PF11862 Domain of unknown function (DUF3382) LQF05_RS14040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS14040 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS14040 PF18415 Histidine kinase receptor ArcB trans-membrane domain LQF05_RS14040 PF01627 Hpt domain LQF05_RS14040 PF00989 PAS fold LQF05_RS14040 PF00072 Response regulator receiver domain LQF05_RS14045 PF00072 Response regulator receiver domain LQF05_RS14060 PF00072 Response regulator receiver domain LQF05_RS14060 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS14085 PF07690 Major Facilitator Superfamily LQF05_RS14110 PF00150 Cellulase (glycosyl hydrolase family 5) LQF05_RS14125 PF17783 CvfB-like winged helix domain LQF05_RS14125 PF13509 S1 domain LQF05_RS14130 PF01011 PQQ enzyme repeat LQF05_RS14135 PF07995 Glucose / Sorbosone dehydrogenase LQF05_RS14175 PF00271 Helicase conserved C-terminal domain LQF05_RS14175 PF08494 DEAD/H associated LQF05_RS14175 PF00270 DEAD/DEAH box helicase LQF05_RS14185 PF00106 short chain dehydrogenase LQF05_RS14195 PF03781 Sulfatase-modifying factor enzyme 1 LQF05_RS14195 PF12867 DinB superfamily LQF05_RS14205 PF01483 Proprotein convertase P-domain LQF05_RS14205 PF00082 Subtilase family LQF05_RS14215 PF13537 Glutamine amidotransferase domain LQF05_RS14215 PF00733 Asparagine synthase LQF05_RS14220 PF08443 RimK-like ATP-grasp domain LQF05_RS14220 PF08245 Mur ligase middle domain LQF05_RS14220 PF02875 Mur ligase family, glutamate ligase domain LQF05_RS14225 PF05343 M42 glutamyl aminopeptidase LQF05_RS14230 PF01627 Hpt domain LQF05_RS14230 PF00672 HAMP domain LQF05_RS14230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS14230 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS14230 PF00072 Response regulator receiver domain LQF05_RS14230 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LQF05_RS14235 PF06794 Uncharacterised protein family (UPF0270) LQF05_RS14250 PF00561 alpha/beta hydrolase fold LQF05_RS14250 PF00106 short chain dehydrogenase LQF05_RS14255 PF00474 Sodium:solute symporter family LQF05_RS14260 PF04341 Protein of unknown function, DUF485 LQF05_RS14275 PF04333 MlaA lipoprotein LQF05_RS14280 PF02678 Pirin LQF05_RS14280 PF05726 Pirin C-terminal cupin domain LQF05_RS14285 PF03279 Bacterial lipid A biosynthesis acyltransferase LQF05_RS14290 PF05209 Septum formation inhibitor MinC, N-terminal domain LQF05_RS14290 PF03775 Septum formation inhibitor MinC, C-terminal domain LQF05_RS14295 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LQF05_RS14300 PF03776 Septum formation topological specificity factor MinE LQF05_RS14305 PF00849 RNA pseudouridylate synthase LQF05_RS14315 PF02127 Aminopeptidase I zinc metalloprotease (M18) LQF05_RS14320 PF14765 Polyketide synthase dehydratase LQF05_RS14320 PF16197 Ketoacyl-synthetase C-terminal extension LQF05_RS14320 PF00698 Acyl transferase domain LQF05_RS14320 PF08240 Alcohol dehydrogenase GroES-like domain LQF05_RS14320 PF08990 Erythronolide synthase docking LQF05_RS14320 PF09277 Erythronolide synthase, docking LQF05_RS14320 PF00109 Beta-ketoacyl synthase, N-terminal domain LQF05_RS14320 PF02801 Beta-ketoacyl synthase, C-terminal domain LQF05_RS14320 PF08659 KR domain LQF05_RS14320 PF00550 Phosphopantetheine attachment site LQF05_RS14325 PF11818 C-terminal domain of tail specific protease (DUF3340) LQF05_RS14325 PF00595 PDZ domain LQF05_RS14325 PF03572 Peptidase family S41 LQF05_RS14325 PF17804 Tail specific protease N-terminal domain LQF05_RS14330 PF00563 EAL domain LQF05_RS14330 PF05231 MASE1 LQF05_RS14360 PF00700 Bacterial flagellin C-terminal helical region LQF05_RS14360 PF00669 Bacterial flagellin N-terminal helical region LQF05_RS14360 PF00460 Flagella basal body rod protein LQF05_RS14365 PF00460 Flagella basal body rod protein LQF05_RS14365 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LQF05_RS14370 PF10135 Rod binding protein LQF05_RS14370 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LQF05_RS14375 PF02119 Flagellar P-ring protein LQF05_RS14380 PF02107 Flagellar L-ring protein LQF05_RS14385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LQF05_RS14385 PF00460 Flagella basal body rod protein LQF05_RS14390 PF00460 Flagella basal body rod protein LQF05_RS14390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LQF05_RS14395 PF07559 Flagellar basal body protein FlaE LQF05_RS14395 PF00460 Flagella basal body rod protein LQF05_RS14395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LQF05_RS14400 PF13861 FlgD Tudor-like domain LQF05_RS14400 PF13860 FlgD Ig-like domain LQF05_RS14400 PF03963 Flagellar hook capping protein - N-terminal region LQF05_RS14405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LQF05_RS14405 PF00460 Flagella basal body rod protein LQF05_RS14410 PF00460 Flagella basal body rod protein LQF05_RS14415 PF03705 CheR methyltransferase, all-alpha domain LQF05_RS14415 PF01739 CheR methyltransferase, SAM binding domain LQF05_RS14420 PF01584 CheW-like domain LQF05_RS14420 PF00072 Response regulator receiver domain LQF05_RS14440 PF07238 PilZ domain LQF05_RS14440 PF07317 Flagellar regulator YcgR LQF05_RS14460 PF03869 Arc-like DNA binding domain LQF05_RS14465 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit LQF05_RS14470 PF00364 Biotin-requiring enzyme LQF05_RS14470 PF02436 Conserved carboxylase domain LQF05_RS14470 PF00682 HMGL-like LQF05_RS14475 PF04277 Oxaloacetate decarboxylase, gamma chain LQF05_RS14480 PF00571 CBS domain LQF05_RS14480 PF01769 Divalent cation transporter LQF05_RS14480 PF03448 MgtE intracellular N domain LQF05_RS14505 PF02599 Global regulator protein family LQF05_RS14510 PF13840 ACT domain LQF05_RS14510 PF00696 Amino acid kinase family LQF05_RS14510 PF01842 ACT domain LQF05_RS14515 PF01411 tRNA synthetases class II (A) LQF05_RS14515 PF02272 DHHA1 domain LQF05_RS14515 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LQF05_RS14520 PF01212 Beta-eliminating lyase LQF05_RS14530 PF03692 Putative zinc- or iron-chelating domain LQF05_RS14540 PF05166 YcgL domain LQF05_RS14545 PF01612 3'-5' exonuclease LQF05_RS14545 PF00570 HRDC domain LQF05_RS14550 PF00581 Rhodanese-like domain LQF05_RS14555 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LQF05_RS14560 PF00255 Glutathione peroxidase LQF05_RS14565 PF03459 TOBE domain LQF05_RS14565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS14575 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS14580 PF03459 TOBE domain LQF05_RS14580 PF00005 ABC transporter LQF05_RS14585 PF01042 Endoribonuclease L-PSP LQF05_RS14590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS14590 PF03466 LysR substrate binding domain LQF05_RS14595 PF02654 Cobalamin-5-phosphate synthase LQF05_RS14605 PF02277 Phosphoribosyltransferase LQF05_RS14610 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LQF05_RS14615 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LQF05_RS14615 PF07685 CobB/CobQ-like glutamine amidotransferase domain LQF05_RS14620 PF00155 Aminotransferase class I and II LQF05_RS14625 PF03186 CobD/Cbib protein LQF05_RS14625 PF17113 Regulatory signalling modulator protein AmpE LQF05_RS14635 PF00881 Nitroreductase family LQF05_RS14640 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LQF05_RS14640 PF07685 CobB/CobQ-like glutamine amidotransferase domain LQF05_RS14645 PF12557 Cob(I)alamin adenosyltransferase N terminal LQF05_RS14645 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LQF05_RS14655 PF00593 TonB dependent receptor LQF05_RS14655 PF07715 TonB-dependent Receptor Plug Domain LQF05_RS14670 PF00877 NlpC/P60 family LQF05_RS14675 PF00877 NlpC/P60 family LQF05_RS14680 PF02146 Sir2 family LQF05_RS14690 PF08173 Membrane bound YbgT-like protein LQF05_RS14695 PF02322 Cytochrome bd terminal oxidase subunit II LQF05_RS14700 PF01654 Cytochrome bd terminal oxidase subunit I LQF05_RS14720 PF03352 Methyladenine glycosylase LQF05_RS14725 PF00793 DAHP synthetase I family LQF05_RS14730 PF01171 PP-loop family LQF05_RS14740 PF04893 Yip1 domain LQF05_RS14750 PF10263 SprT-like family LQF05_RS14750 PF17283 SprT-like zinc ribbon domain LQF05_RS14755 PF07690 Major Facilitator Superfamily LQF05_RS14760 PF06796 Periplasmic nitrate reductase protein NapE LQF05_RS14770 PF01568 Molydopterin dinucleotide binding domain LQF05_RS14770 PF00384 Molybdopterin oxidoreductase LQF05_RS14770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LQF05_RS14775 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) LQF05_RS14780 PF03264 NapC/NirT cytochrome c family, N-terminal region LQF05_RS14785 PF00692 dUTPase LQF05_RS14790 PF00313 'Cold-shock' DNA-binding domain LQF05_RS14795 PF10609 NUBPL iron-transfer P-loop NTPase LQF05_RS14800 PF09334 tRNA synthetases class I (M) LQF05_RS14800 PF01588 Putative tRNA binding domain LQF05_RS14810 PF00849 RNA pseudouridylate synthase LQF05_RS14810 PF01479 S4 domain LQF05_RS14820 PF00589 Phage integrase family LQF05_RS14820 PF02899 Phage integrase, N-terminal SAM-like domain LQF05_RS14905 PF02627 Carboxymuconolactone decarboxylase family LQF05_RS14910 PF12146 Serine aminopeptidase, S33 LQF05_RS14915 PF10397 Adenylosuccinate lyase C-terminus LQF05_RS14915 PF00206 Lyase LQF05_RS14920 PF02803 Thiolase, C-terminal domain LQF05_RS14920 PF00108 Thiolase, N-terminal domain LQF05_RS14925 PF01144 Coenzyme A transferase LQF05_RS14930 PF01144 Coenzyme A transferase LQF05_RS14935 PF09339 IclR helix-turn-helix domain LQF05_RS14935 PF01614 Bacterial transcriptional regulator LQF05_RS14940 PF03547 Membrane transport protein LQF05_RS14945 PF03969 AFG1-like ATPase LQF05_RS14950 PF00775 Dioxygenase LQF05_RS14955 PF00775 Dioxygenase LQF05_RS14955 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal LQF05_RS14960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS14960 PF03466 LysR substrate binding domain LQF05_RS14985 PF02563 Polysaccharide biosynthesis/export protein LQF05_RS14985 PF10531 SLBB domain LQF05_RS14985 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LQF05_RS14990 PF13614 AAA domain LQF05_RS14990 PF13807 G-rich domain on putative tyrosine kinase LQF05_RS14990 PF02706 Chain length determinant protein LQF05_RS15005 PF02397 Bacterial sugar transferase LQF05_RS15015 PF00155 Aminotransferase class I and II LQF05_RS15020 PF02423 Ornithine cyclodeaminase/mu-crystallin family LQF05_RS15025 PF04991 LicD family LQF05_RS15040 PF16363 GDP-mannose 4,6 dehydratase LQF05_RS15045 PF01370 NAD dependent epimerase/dehydratase family LQF05_RS15055 PF00293 NUDIX domain LQF05_RS15060 PF00483 Nucleotidyl transferase LQF05_RS15060 PF01050 Mannose-6-phosphate isomerase LQF05_RS15085 PF00474 Sodium:solute symporter family LQF05_RS15090 PF07715 TonB-dependent Receptor Plug Domain LQF05_RS15090 PF00593 TonB dependent receptor LQF05_RS15100 PF00474 Sodium:solute symporter family LQF05_RS15105 PF14850 DNA-binding domain of Proline dehydrogenase LQF05_RS15105 PF01619 Proline dehydrogenase LQF05_RS15105 PF00171 Aldehyde dehydrogenase family LQF05_RS15105 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LQF05_RS15110 PF12833 Helix-turn-helix domain LQF05_RS15115 PF02190 ATP-dependent protease La (LON) substrate-binding domain LQF05_RS15115 PF05362 Lon protease (S16) C-terminal proteolytic domain LQF05_RS15115 PF00004 ATPase family associated with various cellular activities (AAA) LQF05_RS15125 PF13649 Methyltransferase domain LQF05_RS15130 PF08003 Protein of unknown function (DUF1698) LQF05_RS15140 PF03466 LysR substrate binding domain LQF05_RS15140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS15150 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LQF05_RS15155 PF02565 Recombination protein O C terminal LQF05_RS15155 PF11967 Recombination protein O N terminal LQF05_RS15160 PF01926 50S ribosome-binding GTPase LQF05_RS15160 PF07650 KH domain LQF05_RS15165 PF00035 Double-stranded RNA binding motif LQF05_RS15165 PF14622 Ribonuclease-III-like LQF05_RS15175 PF10502 Signal peptidase, peptidase S26 LQF05_RS15180 PF00679 Elongation factor G C-terminus LQF05_RS15180 PF00009 Elongation factor Tu GTP binding domain LQF05_RS15180 PF03144 Elongation factor Tu domain 2 LQF05_RS15180 PF06421 GTP-binding protein LepA C-terminus LQF05_RS15185 PF13180 PDZ domain LQF05_RS15195 PF03888 MucB/RseB N-terminal domain LQF05_RS15195 PF17188 MucB/RseB C-terminal domain LQF05_RS15200 PF03872 Anti sigma-E protein RseA, N-terminal domain LQF05_RS15200 PF03873 Anti sigma-E protein RseA, C-terminal domain LQF05_RS15205 PF04542 Sigma-70 region 2 LQF05_RS15205 PF08281 Sigma-70, region 4 LQF05_RS15210 PF00890 FAD binding domain LQF05_RS15210 PF02910 Fumarate reductase flavoprotein C-term LQF05_RS15220 PF03937 Flavinator of succinate dehydrogenase LQF05_RS15225 PF01571 Aminomethyltransferase folate-binding domain LQF05_RS15240 PF03167 Uracil DNA glycosylase superfamily LQF05_RS15245 PF13458 Periplasmic binding protein LQF05_RS15250 PF00378 Enoyl-CoA hydratase/isomerase LQF05_RS15265 PF02508 Rnf-Nqr subunit, membrane protein LQF05_RS15270 PF04060 Putative Fe-S cluster LQF05_RS15275 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LQF05_RS15275 PF12838 4Fe-4S dicluster domain LQF05_RS15275 PF13375 RnfC Barrel sandwich hybrid domain LQF05_RS15275 PF10531 SLBB domain LQF05_RS15280 PF03116 NQR2, RnfD, RnfE family LQF05_RS15285 PF04205 FMN-binding domain LQF05_RS15290 PF02508 Rnf-Nqr subunit, membrane protein LQF05_RS15295 PF10576 Iron-sulfur binding domain of endonuclease III LQF05_RS15295 PF00633 Helix-hairpin-helix motif LQF05_RS15295 PF00730 HhH-GPD superfamily base excision DNA repair protein LQF05_RS15305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LQF05_RS15310 PF00764 Arginosuccinate synthase LQF05_RS15320 PF01979 Amidohydrolase family LQF05_RS15325 PF00929 Exonuclease LQF05_RS15330 PF00291 Pyridoxal-phosphate dependent enzyme LQF05_RS15330 PF14821 Threonine synthase N terminus LQF05_RS15335 PF03447 Homoserine dehydrogenase, NAD binding domain LQF05_RS15335 PF01842 ACT domain LQF05_RS15335 PF00742 Homoserine dehydrogenase LQF05_RS15340 PF04828 Glutathione-dependent formaldehyde-activating enzyme LQF05_RS15345 PF10411 Disulfide bond isomerase protein N-terminus LQF05_RS15345 PF13098 Thioredoxin-like domain LQF05_RS15350 PF02899 Phage integrase, N-terminal SAM-like domain LQF05_RS15350 PF00589 Phage integrase family LQF05_RS15355 PF01245 Ribosomal protein L19 LQF05_RS15360 PF01746 tRNA (Guanine-1)-methyltransferase LQF05_RS15365 PF01782 RimM N-terminal domain LQF05_RS15365 PF05239 PRC-barrel domain LQF05_RS15370 PF00886 Ribosomal protein S16 LQF05_RS15375 PF02881 SRP54-type protein, helical bundle domain LQF05_RS15375 PF00448 SRP54-type protein, GTPase domain LQF05_RS15375 PF02978 Signal peptide binding domain LQF05_RS15380 PF01578 Cytochrome C assembly protein LQF05_RS15385 PF03471 Transporter associated domain LQF05_RS15385 PF01595 Cyclin M transmembrane N-terminal domain LQF05_RS15385 PF00571 CBS domain LQF05_RS15390 PF02222 ATP-grasp domain LQF05_RS15390 PF01370 NAD dependent epimerase/dehydratase family LQF05_RS15400 PF00132 Bacterial transferase hexapeptide (six repeats) LQF05_RS15405 PF00293 NUDIX domain LQF05_RS15410 PF00293 NUDIX domain LQF05_RS15410 PF09297 NADH pyrophosphatase zinc ribbon domain LQF05_RS15415 PF03734 L,D-transpeptidase catalytic domain LQF05_RS15420 PF01784 NIF3 (NGG1p interacting factor 3) LQF05_RS15425 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LQF05_RS15425 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LQF05_RS15425 PF02769 AIR synthase related protein, C-terminal domain LQF05_RS15430 PF00005 ABC transporter LQF05_RS15435 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS15440 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS15445 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQF05_RS15450 PF02230 Phospholipase/Carboxylesterase LQF05_RS15455 PF00270 DEAD/DEAH box helicase LQF05_RS15455 PF00271 Helicase conserved C-terminal domain LQF05_RS15465 PF02391 MoaE protein LQF05_RS15470 PF02597 ThiS family LQF05_RS15475 PF01967 MoaC family LQF05_RS15480 PF13638 PIN domain LQF05_RS15480 PF02562 PhoH-like protein LQF05_RS15485 PF01545 Cation efflux family LQF05_RS15485 PF16916 Dimerisation domain of Zinc Transporter LQF05_RS15490 PF03883 Peroxide stress protein YaaA LQF05_RS15495 PF00483 Nucleotidyl transferase LQF05_RS15495 PF01050 Mannose-6-phosphate isomerase LQF05_RS15505 PF05872 Bacterial protein of unknown function (DUF853) LQF05_RS15515 PF01842 ACT domain LQF05_RS15515 PF00551 Formyl transferase LQF05_RS15525 PF08411 Exonuclease C-terminal LQF05_RS15525 PF00929 Exonuclease LQF05_RS15550 PF17863 AAA lid domain LQF05_RS15550 PF07726 ATPase family associated with various cellular activities (AAA) LQF05_RS15575 PF00224 Pyruvate kinase, barrel domain LQF05_RS15575 PF02887 Pyruvate kinase, alpha/beta domain LQF05_RS15580 PF00175 Oxidoreductase NAD-binding domain LQF05_RS15580 PF00970 Oxidoreductase FAD-binding domain LQF05_RS15585 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS15590 PF05681 Fumarate hydratase (Fumerase) LQF05_RS15590 PF05683 Fumarase C-terminus LQF05_RS15595 PF09905 DNA-binding protein VF530 LQF05_RS15600 PF01965 DJ-1/PfpI family LQF05_RS15605 PF13091 PLD-like domain LQF05_RS15605 PF13396 Phospholipase_D-nuclease N-terminal LQF05_RS15630 PF00596 Class II Aldolase and Adducin N-terminal domain LQF05_RS15635 PF00258 Flavodoxin LQF05_RS15650 PF02152 Dihydroneopterin aldolase LQF05_RS15670 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQF05_RS15670 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQF05_RS15675 PF16925 Tetracyclin repressor-like, C-terminal domain LQF05_RS15675 PF00440 Bacterial regulatory proteins, tetR family LQF05_RS15680 PF00255 Glutathione peroxidase LQF05_RS15685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQF05_RS15690 PF00871 Acetokinase family LQF05_RS15695 PF01515 Phosphate acetyl/butaryl transferase LQF05_RS15695 PF07085 DRTGG domain LQF05_RS15700 PF01553 Acyltransferase LQF05_RS15705 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS15705 PF03707 Bacterial signalling protein N terminal repeat LQF05_RS15705 PF00563 EAL domain LQF05_RS15710 PF00072 Response regulator receiver domain LQF05_RS15710 PF09308 LuxQ, periplasmic LQF05_RS15710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS15710 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS15715 PF00691 OmpA family LQF05_RS15715 PF13488 Glycine zipper LQF05_RS15720 PF00753 Metallo-beta-lactamase superfamily LQF05_RS15725 PF13426 PAS domain LQF05_RS15725 PF00072 Response regulator receiver domain LQF05_RS15725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS15730 PF00501 AMP-binding enzyme LQF05_RS15730 PF13193 AMP-binding enzyme C-terminal domain LQF05_RS15735 PF01810 LysE type translocator LQF05_RS15740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LQF05_RS15740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LQF05_RS15745 PF05175 Methyltransferase small domain LQF05_RS15745 PF08468 Methyltransferase small domain N-terminal LQF05_RS15750 PF01169 Uncharacterized protein family UPF0016 LQF05_RS15760 PF01435 Peptidase family M48 LQF05_RS15765 PF00672 HAMP domain LQF05_RS15765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS15765 PF02743 Cache domain LQF05_RS15795 PF07044 Protein of unknown function (DUF1329) LQF05_RS15810 PF06039 Malate:quinone oxidoreductase (Mqo) LQF05_RS15820 PF00916 Sulfate permease family LQF05_RS15820 PF01740 STAS domain LQF05_RS15825 PF00106 short chain dehydrogenase LQF05_RS15830 PF03641 Possible lysine decarboxylase LQF05_RS15850 PF02308 MgtC family LQF05_RS15855 PF07995 Glucose / Sorbosone dehydrogenase LQF05_RS15875 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LQF05_RS15880 PF12327 FtsZ family, C-terminal domain LQF05_RS15880 PF00091 Tubulin/FtsZ family, GTPase domain LQF05_RS15885 PF02491 SHS2 domain inserted in FTSA LQF05_RS15890 PF03799 Cell division protein FtsQ LQF05_RS15890 PF08478 POTRA domain, FtsQ-type LQF05_RS15895 PF07478 D-ala D-ala ligase C-terminus LQF05_RS15895 PF01820 D-ala D-ala ligase N-terminus LQF05_RS15900 PF02875 Mur ligase family, glutamate ligase domain LQF05_RS15900 PF08245 Mur ligase middle domain LQF05_RS15900 PF01225 Mur ligase family, catalytic domain LQF05_RS15905 PF03033 Glycosyltransferase family 28 N-terminal domain LQF05_RS15905 PF04101 Glycosyltransferase family 28 C-terminal domain LQF05_RS15910 PF01098 Cell cycle protein LQF05_RS15915 PF02875 Mur ligase family, glutamate ligase domain LQF05_RS15915 PF08245 Mur ligase middle domain LQF05_RS15920 PF00953 Glycosyl transferase family 4 LQF05_RS15920 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LQF05_RS15925 PF08245 Mur ligase middle domain LQF05_RS15925 PF01225 Mur ligase family, catalytic domain LQF05_RS15925 PF02875 Mur ligase family, glutamate ligase domain LQF05_RS15930 PF02875 Mur ligase family, glutamate ligase domain LQF05_RS15930 PF08245 Mur ligase middle domain LQF05_RS15930 PF01225 Mur ligase family, catalytic domain LQF05_RS15935 PF03717 Penicillin-binding Protein dimerisation domain LQF05_RS15935 PF00905 Penicillin binding protein transpeptidase domain LQF05_RS15940 PF04999 Cell division protein FtsL LQF05_RS15945 PF01795 MraW methylase family LQF05_RS15950 PF02381 MraZ protein, putative antitoxin-like LQF05_RS15960 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LQF05_RS15965 PF04348 LppC putative lipoprotein LQF05_RS15970 PF02021 Uncharacterised protein family UPF0102 LQF05_RS15975 PF13580 SIS domain LQF05_RS15980 PF04972 BON domain LQF05_RS15985 PF04386 Stringent starvation protein B LQF05_RS15990 PF02798 Glutathione S-transferase, N-terminal domain LQF05_RS15990 PF00043 Glutathione S-transferase, C-terminal domain LQF05_RS15995 PF02167 Cytochrome C1 family LQF05_RS16000 PF00032 Cytochrome b(C-terminal)/b6/petD LQF05_RS16000 PF00033 Cytochrome b/b6/petB LQF05_RS16005 PF00355 Rieske [2Fe-2S] domain LQF05_RS16005 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LQF05_RS16010 PF00380 Ribosomal protein S9/S16 LQF05_RS16015 PF00572 Ribosomal protein L13 LQF05_RS16020 PF00248 Aldo/keto reductase family LQF05_RS16030 PF03884 DNA gyrase inhibitor YacG LQF05_RS16035 PF01121 Dephospho-CoA kinase LQF05_RS16040 PF06750 Bacterial Peptidase A24 N-terminal domain LQF05_RS16040 PF01478 Type IV leader peptidase family LQF05_RS16045 PF00482 Type II secretion system (T2SS), protein F LQF05_RS16050 PF00437 Type II/IV secretion system protein LQF05_RS16050 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LQF05_RS16055 PF00114 Pilin (bacterial filament) LQF05_RS16055 PF07963 Prokaryotic N-terminal methylation motif LQF05_RS16060 PF00009 Elongation factor Tu GTP binding domain LQF05_RS16065 PF01507 Phosphoadenosine phosphosulfate reductase family LQF05_RS16070 PF01784 NIF3 (NGG1p interacting factor 3) LQF05_RS16075 PF13180 PDZ domain LQF05_RS16080 PF00155 Aminotransferase class I and II LQF05_RS16085 PF00815 Histidinol dehydrogenase LQF05_RS16090 PF01634 ATP phosphoribosyltransferase LQF05_RS16095 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LQF05_RS16105 PF06146 Phosphate-starvation-inducible E LQF05_RS16115 PF05494 MlaC protein LQF05_RS16120 PF02470 MlaD protein LQF05_RS16125 PF02405 Permease MlaE LQF05_RS16130 PF00005 ABC transporter LQF05_RS16135 PF00571 CBS domain LQF05_RS16135 PF01380 SIS domain LQF05_RS16155 PF00005 ABC transporter LQF05_RS16155 PF12399 Branched-chain amino acid ATP-binding cassette transporter LQF05_RS16160 PF00309 Sigma-54 factor, Activator interacting domain (AID) LQF05_RS16160 PF04963 Sigma-54 factor, core binding domain LQF05_RS16160 PF04552 Sigma-54, DNA binding domain LQF05_RS16165 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LQF05_RS16170 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LQF05_RS16175 PF03668 P-loop ATPase protein family LQF05_RS16180 PF00381 PTS HPr component phosphorylation site LQF05_RS16185 PF01523 Putative modulator of DNA gyrase LQF05_RS16190 PF04751 Protein of unknown function (DUF615) LQF05_RS16195 PF01523 Putative modulator of DNA gyrase LQF05_RS16200 PF00795 Carbon-nitrogen hydrolase LQF05_RS16210 PF10150 Ribonuclease E/G family LQF05_RS16210 PF00575 S1 RNA binding domain LQF05_RS16215 PF02545 Maf-like protein LQF05_RS16230 PF04085 rod shape-determining protein MreC LQF05_RS16240 PF02686 Glu-tRNAGln amidotransferase C subunit LQF05_RS16245 PF01425 Amidase LQF05_RS16250 PF02934 GatB/GatE catalytic domain LQF05_RS16250 PF02637 GatB domain LQF05_RS16255 PF03330 Lytic transglycolase LQF05_RS16255 PF05036 Sporulation related domain LQF05_RS16260 PF01699 Sodium/calcium exchanger protein LQF05_RS16265 PF01699 Sodium/calcium exchanger protein LQF05_RS16280 PF01476 LysM domain LQF05_RS16280 PF08525 Opacity-associated protein A N-terminal motif LQF05_RS16280 PF01551 Peptidase family M23 LQF05_RS16290 PF02954 Bacterial regulatory protein, Fis family LQF05_RS16290 PF00072 Response regulator receiver domain LQF05_RS16295 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS16295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS16305 PF07715 TonB-dependent Receptor Plug Domain LQF05_RS16305 PF00593 TonB dependent receptor LQF05_RS16325 PF00175 Oxidoreductase NAD-binding domain LQF05_RS16325 PF00258 Flavodoxin LQF05_RS16325 PF00667 FAD binding domain LQF05_RS16330 PF07715 TonB-dependent Receptor Plug Domain LQF05_RS16330 PF00593 TonB dependent receptor LQF05_RS16335 PF18331 PKHD-type hydroxylase C-terminal domain LQF05_RS16335 PF13640 2OG-Fe(II) oxygenase superfamily LQF05_RS16345 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LQF05_RS16345 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LQF05_RS16350 PF16658 Class II release factor RF3, C-terminal domain LQF05_RS16350 PF03144 Elongation factor Tu domain 2 LQF05_RS16350 PF00009 Elongation factor Tu GTP binding domain LQF05_RS16360 PF01011 PQQ enzyme repeat LQF05_RS16365 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LQF05_RS16365 PF02378 Phosphotransferase system, EIIC LQF05_RS16370 PF00294 pfkB family carbohydrate kinase LQF05_RS16375 PF00381 PTS HPr component phosphorylation site LQF05_RS16375 PF05524 PEP-utilising enzyme, N-terminal LQF05_RS16375 PF00391 PEP-utilising enzyme, mobile domain LQF05_RS16375 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LQF05_RS16375 PF02896 PEP-utilising enzyme, TIM barrel domain LQF05_RS16380 PF00356 Bacterial regulatory proteins, lacI family LQF05_RS16380 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LQF05_RS16390 PF13847 Methyltransferase domain LQF05_RS16420 PF01554 MatE LQF05_RS16430 PF17810 Arginine decarboxylase helical bundle domain LQF05_RS16430 PF17944 Arginine decarboxylase C-terminal helical extension LQF05_RS16430 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LQF05_RS16435 PF01253 Translation initiation factor SUI1 LQF05_RS16440 PF01266 FAD dependent oxidoreductase LQF05_RS16445 PF07963 Prokaryotic N-terminal methylation motif LQF05_RS16445 PF14245 Type IV pilin PilA LQF05_RS16450 PF07963 Prokaryotic N-terminal methylation motif LQF05_RS16450 PF00114 Pilin (bacterial filament) LQF05_RS16470 PF05567 Neisseria PilC beta-propeller domain LQF05_RS16475 PF07963 Prokaryotic N-terminal methylation motif LQF05_RS16475 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor LQF05_RS16480 PF02401 LytB protein LQF05_RS16485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQF05_RS16490 PF01252 Signal peptidase (SPase) II LQF05_RS16495 PF08264 Anticodon-binding domain of tRNA LQF05_RS16495 PF00133 tRNA synthetases class I (I, L, M and V) LQF05_RS16495 PF06827 Zinc finger found in FPG and IleRS LQF05_RS16500 PF06574 FAD synthetase LQF05_RS16500 PF01687 Riboflavin kinase LQF05_RS16505 PF03023 Lipid II flippase MurJ LQF05_RS16510 PF01649 Ribosomal protein S20 LQF05_RS16515 PF05981 CreA protein LQF05_RS16520 PF00696 Amino acid kinase family LQF05_RS16520 PF01472 PUA domain LQF05_RS16525 PF01926 50S ribosome-binding GTPase LQF05_RS16525 PF01018 GTP1/OBG LQF05_RS16530 PF01016 Ribosomal L27 protein LQF05_RS16535 PF00829 Ribosomal prokaryotic L21 protein LQF05_RS16540 PF00348 Polyprenyl synthetase LQF05_RS16550 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LQF05_RS16550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQF05_RS16560 PF04244 Deoxyribodipyrimidine photo-lyase-related protein LQF05_RS16570 PF03350 Uncharacterized protein family, UPF0114 LQF05_RS16580 PF13654 AAA domain LQF05_RS16580 PF05362 Lon protease (S16) C-terminal proteolytic domain LQF05_RS16585 PF03150 Di-haem cytochrome c peroxidase LQF05_RS16585 PF00034 Cytochrome c LQF05_RS16590 PF01741 Large-conductance mechanosensitive channel, MscL LQF05_RS16595 PF04325 Protein of unknown function (DUF465) LQF05_RS16605 PF18073 Rubredoxin metal binding domain LQF05_RS16610 PF07238 PilZ domain LQF05_RS16620 PF00464 Serine hydroxymethyltransferase LQF05_RS16625 PF00005 ABC transporter LQF05_RS16625 PF12848 ABC transporter LQF05_RS16640 PF09345 Domain of unknown function (DUF1987) LQF05_RS16645 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS16650 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LQF05_RS16650 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LQF05_RS16655 PF00970 Oxidoreductase FAD-binding domain LQF05_RS16655 PF00175 Oxidoreductase NAD-binding domain LQF05_RS16660 PF05175 Methyltransferase small domain LQF05_RS16665 PF13411 MerR HTH family regulatory protein LQF05_RS16690 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LQF05_RS16690 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LQF05_RS16695 PF03450 CO dehydrogenase flavoprotein C-terminal domain LQF05_RS16695 PF00941 FAD binding domain in molybdopterin dehydrogenase LQF05_RS16700 PF00111 2Fe-2S iron-sulfur cluster binding domain LQF05_RS16700 PF01799 [2Fe-2S] binding domain LQF05_RS16705 PF00132 Bacterial transferase hexapeptide (six repeats) LQF05_RS16705 PF12804 MobA-like NTP transferase domain LQF05_RS16710 PF13478 XdhC Rossmann domain LQF05_RS16710 PF02625 XdhC and CoxI family LQF05_RS16715 PF01965 DJ-1/PfpI family LQF05_RS16720 PF00860 Permease family LQF05_RS16725 PF05958 tRNA (Uracil-5-)-methyltransferase LQF05_RS16730 PF00884 Sulfatase LQF05_RS16735 PF01219 Prokaryotic diacylglycerol kinase LQF05_RS16750 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS16750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS16750 PF08521 Two-component sensor kinase N-terminal LQF05_RS16755 PF00486 Transcriptional regulatory protein, C terminal LQF05_RS16755 PF00072 Response regulator receiver domain LQF05_RS16760 PF00884 Sulfatase LQF05_RS16785 PF00501 AMP-binding enzyme LQF05_RS16795 PF00106 short chain dehydrogenase LQF05_RS16805 PF00072 Response regulator receiver domain LQF05_RS16805 PF00486 Transcriptional regulatory protein, C terminal LQF05_RS16810 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS16810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS16815 PF01292 Prokaryotic cytochrome b561 LQF05_RS16820 PF00994 Probable molybdopterin binding domain LQF05_RS16820 PF03454 MoeA C-terminal region (domain IV) LQF05_RS16820 PF03453 MoeA N-terminal region (domain I and II) LQF05_RS16825 PF00994 Probable molybdopterin binding domain LQF05_RS16830 PF06463 Molybdenum Cofactor Synthesis C LQF05_RS16830 PF04055 Radical SAM superfamily LQF05_RS16835 PF09312 SurA N-terminal domain LQF05_RS16840 PF02665 Nitrate reductase gamma subunit LQF05_RS16845 PF02613 Nitrate reductase delta subunit LQF05_RS16850 PF14711 Respiratory nitrate reductase beta C-terminal LQF05_RS16850 PF13247 4Fe-4S dicluster domain LQF05_RS16855 PF14710 Respiratory nitrate reductase alpha N-terminal LQF05_RS16855 PF00384 Molybdopterin oxidoreductase LQF05_RS16855 PF01568 Molydopterin dinucleotide binding domain LQF05_RS16860 PF07690 Major Facilitator Superfamily LQF05_RS16870 PF07690 Major Facilitator Superfamily LQF05_RS16875 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LQF05_RS16875 PF07730 Histidine kinase LQF05_RS16875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS16875 PF00672 HAMP domain LQF05_RS16880 PF00072 Response regulator receiver domain LQF05_RS16880 PF00196 Bacterial regulatory proteins, luxR family LQF05_RS16905 PF05860 haemagglutination activity domain LQF05_RS16930 PF04228 Putative neutral zinc metallopeptidase LQF05_RS16950 PF00850 Histone deacetylase domain LQF05_RS16955 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQF05_RS16955 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQF05_RS16960 PF00107 Zinc-binding dehydrogenase LQF05_RS16960 PF08240 Alcohol dehydrogenase GroES-like domain LQF05_RS16970 PF01810 LysE type translocator LQF05_RS16975 PF00271 Helicase conserved C-terminal domain LQF05_RS16975 PF00270 DEAD/DEAH box helicase LQF05_RS16980 PF00999 Sodium/hydrogen exchanger family LQF05_RS16980 PF02254 TrkA-N domain LQF05_RS16995 PF00672 HAMP domain LQF05_RS16995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS16995 PF02743 Cache domain LQF05_RS17000 PF00209 Sodium:neurotransmitter symporter family LQF05_RS17005 PF14497 Glutathione S-transferase, C-terminal domain LQF05_RS17005 PF02798 Glutathione S-transferase, N-terminal domain LQF05_RS17015 PF04209 homogentisate 1,2-dioxygenase LQF05_RS17020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LQF05_RS17025 PF00209 Sodium:neurotransmitter symporter family LQF05_RS17030 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LQF05_RS17030 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LQF05_RS17040 PF01037 Lrp/AsnC ligand binding domain LQF05_RS17040 PF13404 AsnC-type helix-turn-helix domain LQF05_RS17050 PF02667 Short chain fatty acid transporter LQF05_RS17060 PF00106 short chain dehydrogenase LQF05_RS17065 PF00591 Glycosyl transferase family, a/b domain LQF05_RS17065 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LQF05_RS17065 PF02885 Glycosyl transferase family, helical bundle domain LQF05_RS17070 PF00156 Phosphoribosyl transferase domain LQF05_RS17075 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LQF05_RS17075 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LQF05_RS17080 PF00849 RNA pseudouridylate synthase LQF05_RS17110 PF00072 Response regulator receiver domain LQF05_RS17110 PF00486 Transcriptional regulatory protein, C terminal LQF05_RS17115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS17130 PF00149 Calcineurin-like phosphoesterase LQF05_RS17130 PF12320 Type 5 capsule protein repressor C-terminal domain LQF05_RS17140 PF07715 TonB-dependent Receptor Plug Domain LQF05_RS17140 PF00593 TonB dependent receptor LQF05_RS17145 PF01497 Periplasmic binding protein LQF05_RS17155 PF00925 GTP cyclohydrolase II LQF05_RS17165 PF04608 Phosphatidylglycerophosphatase A LQF05_RS17170 PF02769 AIR synthase related protein, C-terminal domain LQF05_RS17170 PF00586 AIR synthase related protein, N-terminal domain LQF05_RS17175 PF01029 NusB family LQF05_RS17180 PF00885 6,7-dimethyl-8-ribityllumazine synthase LQF05_RS17185 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LQF05_RS17185 PF00925 GTP cyclohydrolase II LQF05_RS17190 PF00677 Lumazine binding domain LQF05_RS17195 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LQF05_RS17195 PF01872 RibD C-terminal domain LQF05_RS17200 PF03477 ATP cone domain LQF05_RS17220 PF01206 Sulfurtransferase TusA LQF05_RS17225 PF04143 Sulphur transport LQF05_RS17230 PF00085 Thioredoxin LQF05_RS17245 PF00005 ABC transporter LQF05_RS17265 PF03544 Gram-negative bacterial TonB protein C-terminal LQF05_RS17270 PF02472 Biopolymer transport protein ExbD/TolR LQF05_RS17275 PF01618 MotA/TolQ/ExbB proton channel family LQF05_RS17280 PF01618 MotA/TolQ/ExbB proton channel family LQF05_RS17290 PF03922 OmpW family LQF05_RS17295 PF16363 GDP-mannose 4,6 dehydratase LQF05_RS17305 PF00436 Single-strand binding protein family LQF05_RS17310 PF07690 Major Facilitator Superfamily LQF05_RS17315 PF17755 UvrA DNA-binding domain LQF05_RS17315 PF17760 UvrA interaction domain LQF05_RS17320 PF00199 Catalase LQF05_RS17320 PF06628 Catalase-related immune-responsive LQF05_RS17325 PF01196 Ribosomal protein L17 LQF05_RS17330 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LQF05_RS17330 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LQF05_RS17330 PF01000 RNA polymerase Rpb3/RpoA insert domain LQF05_RS17335 PF01479 S4 domain LQF05_RS17335 PF00163 Ribosomal protein S4/S9 N-terminal domain LQF05_RS17340 PF00411 Ribosomal protein S11 LQF05_RS17345 PF00416 Ribosomal protein S13/S18 LQF05_RS17350 PF00444 Ribosomal protein L36 LQF05_RS17355 PF00344 SecY translocase LQF05_RS17360 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LQF05_RS17365 PF00327 Ribosomal protein L30p/L7e LQF05_RS17370 PF00333 Ribosomal protein S5, N-terminal domain LQF05_RS17370 PF03719 Ribosomal protein S5, C-terminal domain LQF05_RS17375 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LQF05_RS17380 PF00347 Ribosomal protein L6 LQF05_RS17385 PF00410 Ribosomal protein S8 LQF05_RS17390 PF00253 Ribosomal protein S14p/S29e LQF05_RS17395 PF00281 Ribosomal protein L5 LQF05_RS17395 PF00673 ribosomal L5P family C-terminus LQF05_RS17400 PF00467 KOW motif LQF05_RS17400 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LQF05_RS17405 PF00238 Ribosomal protein L14p/L23e LQF05_RS17410 PF00366 Ribosomal protein S17 LQF05_RS17415 PF00831 Ribosomal L29 protein LQF05_RS17420 PF00252 Ribosomal protein L16p/L10e LQF05_RS17425 PF00189 Ribosomal protein S3, C-terminal domain LQF05_RS17425 PF07650 KH domain LQF05_RS17430 PF00237 Ribosomal protein L22p/L17e LQF05_RS17435 PF00203 Ribosomal protein S19 LQF05_RS17440 PF03947 Ribosomal Proteins L2, C-terminal domain LQF05_RS17440 PF00181 Ribosomal Proteins L2, RNA binding domain LQF05_RS17445 PF00276 Ribosomal protein L23 LQF05_RS17450 PF00573 Ribosomal protein L4/L1 family LQF05_RS17455 PF00297 Ribosomal protein L3 LQF05_RS17460 PF00338 Ribosomal protein S10p/S20e LQF05_RS17465 PF00009 Elongation factor Tu GTP binding domain LQF05_RS17465 PF03144 Elongation factor Tu domain 2 LQF05_RS17465 PF03143 Elongation factor Tu C-terminal domain LQF05_RS17470 PF03144 Elongation factor Tu domain 2 LQF05_RS17470 PF00009 Elongation factor Tu GTP binding domain LQF05_RS17470 PF03764 Elongation factor G, domain IV LQF05_RS17470 PF00679 Elongation factor G C-terminus LQF05_RS17470 PF14492 Elongation Factor G, domain II LQF05_RS17475 PF00177 Ribosomal protein S7p/S5e LQF05_RS17480 PF00164 Ribosomal protein S12/S23 LQF05_RS17485 PF04997 RNA polymerase Rpb1, domain 1 LQF05_RS17485 PF00623 RNA polymerase Rpb1, domain 2 LQF05_RS17485 PF04983 RNA polymerase Rpb1, domain 3 LQF05_RS17485 PF05000 RNA polymerase Rpb1, domain 4 LQF05_RS17485 PF04998 RNA polymerase Rpb1, domain 5 LQF05_RS17490 PF10385 RNA polymerase beta subunit external 1 domain LQF05_RS17490 PF00562 RNA polymerase Rpb2, domain 6 LQF05_RS17490 PF04560 RNA polymerase Rpb2, domain 7 LQF05_RS17490 PF04565 RNA polymerase Rpb2, domain 3 LQF05_RS17490 PF04561 RNA polymerase Rpb2, domain 2 LQF05_RS17490 PF04563 RNA polymerase beta subunit LQF05_RS17495 PF00542 Ribosomal protein L7/L12 C-terminal domain LQF05_RS17495 PF16320 Ribosomal protein L7/L12 dimerisation domain LQF05_RS17500 PF00466 Ribosomal protein L10 LQF05_RS17505 PF00687 Ribosomal protein L1p/L10e family LQF05_RS17510 PF00298 Ribosomal protein L11, RNA binding domain LQF05_RS17510 PF03946 Ribosomal protein L11, N-terminal domain LQF05_RS17515 PF02357 Transcription termination factor nusG LQF05_RS17515 PF00467 KOW motif LQF05_RS17520 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LQF05_RS17530 PF03143 Elongation factor Tu C-terminal domain LQF05_RS17530 PF00009 Elongation factor Tu GTP binding domain LQF05_RS17530 PF03144 Elongation factor Tu domain 2 LQF05_RS17555 PF03309 Type III pantothenate kinase LQF05_RS17560 PF02237 Biotin protein ligase C terminal domain LQF05_RS17560 PF03099 Biotin/lipoate A/B protein ligase family LQF05_RS17560 PF08279 HTH domain LQF05_RS17590 PF01479 S4 domain LQF05_RS17590 PF00579 tRNA synthetases class I (W and Y) LQF05_RS17595 PF04225 Opacity-associated protein A LysM-like domain LQF05_RS17595 PF01551 Peptidase family M23 LQF05_RS17600 PF03702 Anhydro-N-acetylmuramic acid kinase LQF05_RS17605 PF01521 Iron-sulphur cluster biosynthesis LQF05_RS17610 PF01118 Semialdehyde dehydrogenase, NAD binding domain LQF05_RS17610 PF02774 Semialdehyde dehydrogenase, dimerisation domain LQF05_RS17615 PF03653 Uncharacterised protein family (UPF0093) LQF05_RS17625 PF00004 ATPase family associated with various cellular activities (AAA) LQF05_RS17625 PF17862 AAA+ lid domain LQF05_RS17625 PF06480 FtsH Extracellular LQF05_RS17625 PF01434 Peptidase family M41 LQF05_RS17630 PF01230 HIT domain LQF05_RS17635 PF03232 Ubiquinone biosynthesis protein COQ7 LQF05_RS17640 PF02566 OsmC-like protein LQF05_RS17645 PF13545 Crp-like helix-turn-helix domain LQF05_RS17645 PF00027 Cyclic nucleotide-binding domain LQF05_RS17650 PF00218 Indole-3-glycerol phosphate synthase LQF05_RS17655 PF02885 Glycosyl transferase family, helical bundle domain LQF05_RS17655 PF00591 Glycosyl transferase family, a/b domain LQF05_RS17660 PF00117 Glutamine amidotransferase class-I LQF05_RS17665 PF04715 Anthranilate synthase component I, N terminal region LQF05_RS17665 PF00425 chorismate binding enzyme LQF05_RS17670 PF13419 Haloacid dehalogenase-like hydrolase LQF05_RS17675 PF00834 Ribulose-phosphate 3 epimerase family LQF05_RS17680 PF00202 Aminotransferase class-III LQF05_RS17685 PF00171 Aldehyde dehydrogenase family LQF05_RS17690 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS17695 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS17705 PF00005 ABC transporter LQF05_RS17705 PF08402 TOBE domain LQF05_RS17710 PF00072 Response regulator receiver domain LQF05_RS17710 PF00196 Bacterial regulatory proteins, luxR family LQF05_RS17715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS17715 PF07730 Histidine kinase LQF05_RS17715 PF05384 Sensor protein DegS LQF05_RS17725 PF00226 DnaJ domain LQF05_RS17725 PF05099 Tellurite resistance protein TerB LQF05_RS17730 PF00483 Nucleotidyl transferase LQF05_RS17735 PF01636 Phosphotransferase enzyme family LQF05_RS17740 PF04453 LPS transport system D LQF05_RS17740 PF03968 OstA-like protein LQF05_RS17745 PF00639 PPIC-type PPIASE domain LQF05_RS17745 PF09312 SurA N-terminal domain LQF05_RS17750 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LQF05_RS17755 PF00398 Ribosomal RNA adenine dimethylase LQF05_RS17760 PF04379 ApaG domain LQF05_RS17765 PF00149 Calcineurin-like phosphoesterase LQF05_RS17770 PF00581 Rhodanese-like domain LQF05_RS17775 PF08298 PrkA AAA domain LQF05_RS17775 PF06798 PrkA serine protein kinase C-terminal domain LQF05_RS17780 PF04285 Protein of unknown function (DUF444) LQF05_RS17785 PF04293 SpoVR like protein LQF05_RS17790 PF01966 HD domain LQF05_RS17790 PF01743 Poly A polymerase head domain LQF05_RS17790 PF12627 Probable RNA and SrmB- binding site of polymerase A LQF05_RS17795 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LQF05_RS17805 PF02660 Glycerol-3-phosphate acyltransferase LQF05_RS17810 PF00814 Glycoprotease family LQF05_RS17815 PF01165 Ribosomal protein S21 LQF05_RS17820 PF10410 DnaB-helicase binding domain of primase LQF05_RS17820 PF08278 DNA primase DnaG DnaB-binding LQF05_RS17820 PF13662 Toprim domain LQF05_RS17820 PF08275 DNA primase catalytic core, N-terminal domain LQF05_RS17820 PF01807 CHC2 zinc finger LQF05_RS17825 PF04546 Sigma-70, non-essential region LQF05_RS17825 PF03979 Sigma-70 factor, region 1.1 LQF05_RS17825 PF00140 Sigma-70 factor, region 1.2 LQF05_RS17825 PF04542 Sigma-70 region 2 LQF05_RS17825 PF04539 Sigma-70 region 3 LQF05_RS17825 PF04545 Sigma-70, region 4 LQF05_RS17835 PF02080 TrkA-C domain LQF05_RS17835 PF03600 Citrate transporter LQF05_RS17840 PF01053 Cys/Met metabolism PLP-dependent enzyme LQF05_RS17845 PF00085 Thioredoxin LQF05_RS17860 PF00550 Phosphopantetheine attachment site LQF05_RS17865 PF00550 Phosphopantetheine attachment site LQF05_RS17875 PF13193 AMP-binding enzyme C-terminal domain LQF05_RS17875 PF00501 AMP-binding enzyme LQF05_RS17890 PF00221 Aromatic amino acid lyase LQF05_RS17910 PF01494 FAD binding domain LQF05_RS17920 PF00109 Beta-ketoacyl synthase, N-terminal domain LQF05_RS17920 PF02801 Beta-ketoacyl synthase, C-terminal domain LQF05_RS17935 PF02801 Beta-ketoacyl synthase, C-terminal domain LQF05_RS17935 PF00109 Beta-ketoacyl synthase, N-terminal domain LQF05_RS17950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS17950 PF03466 LysR substrate binding domain LQF05_RS17955 PF07690 Major Facilitator Superfamily LQF05_RS17960 PF01208 Uroporphyrinogen decarboxylase (URO-D) LQF05_RS17965 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LQF05_RS17965 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQF05_RS17970 PF00310 Glutamine amidotransferases class-II LQF05_RS17970 PF04898 Glutamate synthase central domain LQF05_RS17970 PF01645 Conserved region in glutamate synthase LQF05_RS17970 PF01493 GXGXG motif LQF05_RS17975 PF05036 Sporulation related domain LQF05_RS17980 PF01761 3-dehydroquinate synthase LQF05_RS17985 PF01202 Shikimate kinase LQF05_RS17990 PF11741 AMIN domain LQF05_RS17990 PF03958 Bacterial type II/III secretion system short domain LQF05_RS17990 PF07660 Secretin and TonB N terminus short domain LQF05_RS17990 PF00263 Bacterial type II and III secretion system protein LQF05_RS17995 PF04351 Pilus assembly protein, PilP LQF05_RS18000 PF04350 Pilus assembly protein, PilO LQF05_RS18005 PF05137 Fimbrial assembly protein (PilN) LQF05_RS18010 PF11104 Type IV pilus assembly protein PilM; LQF05_RS18015 PF17092 Penicillin-binding protein OB-like domain LQF05_RS18015 PF00912 Transglycosylase LQF05_RS18015 PF00905 Penicillin binding protein transpeptidase domain LQF05_RS18020 PF00390 Malic enzyme, N-terminal domain LQF05_RS18020 PF03949 Malic enzyme, NAD binding domain LQF05_RS18030 PF01197 Ribosomal protein L31 LQF05_RS18035 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LQF05_RS18035 PF18074 Primosomal protein N C-terminal domain LQF05_RS18035 PF00271 Helicase conserved C-terminal domain LQF05_RS18035 PF00270 DEAD/DEAH box helicase LQF05_RS18035 PF17764 3′ DNA-binding domain (3′BD) LQF05_RS18040 PF05746 DALR anticodon binding domain LQF05_RS18040 PF00750 tRNA synthetases class I (R) LQF05_RS18040 PF03485 Arginyl tRNA synthetase N terminal domain LQF05_RS18050 PF00175 Oxidoreductase NAD-binding domain LQF05_RS18055 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LQF05_RS18060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LQF05_RS18060 PF07498 Rho termination factor, N-terminal domain LQF05_RS18060 PF07497 Rho termination factor, RNA-binding domain LQF05_RS18065 PF00085 Thioredoxin LQF05_RS18070 PF02541 Ppx/GppA phosphatase family LQF05_RS18075 PF13089 Polyphosphate kinase N-terminal domain LQF05_RS18075 PF13090 Polyphosphate kinase C-terminal domain 2 LQF05_RS18075 PF17941 Polyphosphate kinase C-terminal domain 1 LQF05_RS18075 PF02503 Polyphosphate kinase middle domain LQF05_RS18080 PF00490 Delta-aminolevulinic acid dehydratase LQF05_RS18090 PF03061 Thioesterase superfamily LQF05_RS18095 PF00563 EAL domain LQF05_RS18095 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS18095 PF03707 Bacterial signalling protein N terminal repeat LQF05_RS18100 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LQF05_RS18105 PF01810 LysE type translocator LQF05_RS18110 PF03741 Integral membrane protein TerC family LQF05_RS18120 PF00005 ABC transporter LQF05_RS18120 PF12848 ABC transporter LQF05_RS18135 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ LQF05_RS18140 PF02600 Disulfide bond formation protein DsbB LQF05_RS18155 PF02602 Uroporphyrinogen-III synthase HemD LQF05_RS18160 PF03900 Porphobilinogen deaminase, C-terminal domain LQF05_RS18160 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LQF05_RS18165 PF04397 LytTr DNA-binding domain LQF05_RS18165 PF00072 Response regulator receiver domain LQF05_RS18170 PF07694 5TMR of 5TMR-LYT LQF05_RS18170 PF06580 Histidine kinase LQF05_RS18175 PF14698 Argininosuccinate lyase C-terminal LQF05_RS18175 PF00206 Lyase LQF05_RS18200 PF12633 Adenylate cyclase NT domain LQF05_RS18200 PF01295 Adenylate cyclase, class-I LQF05_RS18210 PF14760 Rnk N-terminus LQF05_RS18210 PF01272 Transcription elongation factor, GreA/GreB, C-term LQF05_RS18215 PF01491 Frataxin-like domain LQF05_RS18220 PF13627 Prokaryotic lipoprotein-attachment site LQF05_RS18225 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LQF05_RS18225 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LQF05_RS18230 PF01678 Diaminopimelate epimerase LQF05_RS18240 PF02899 Phage integrase, N-terminal SAM-like domain LQF05_RS18240 PF00589 Phage integrase family LQF05_RS18245 PF13419 Haloacid dehalogenase-like hydrolase LQF05_RS18255 PF01894 Uncharacterised protein family UPF0047 LQF05_RS18260 PF00909 Ammonium Transporter Family LQF05_RS18265 PF00909 Ammonium Transporter Family LQF05_RS18270 PF00543 Nitrogen regulatory protein P-II LQF05_RS18280 PF13335 Magnesium chelatase, subunit ChlI C-terminal LQF05_RS18280 PF01078 Magnesium chelatase, subunit ChlI LQF05_RS18285 PF02028 BCCT, betaine/carnitine/choline family transporter LQF05_RS18290 PF00563 EAL domain LQF05_RS18290 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS18290 PF03707 Bacterial signalling protein N terminal repeat LQF05_RS18295 PF00580 UvrD/REP helicase N-terminal domain LQF05_RS18295 PF13361 UvrD-like helicase C-terminal domain LQF05_RS18300 PF03006 Haemolysin-III related LQF05_RS18305 PF09339 IclR helix-turn-helix domain LQF05_RS18305 PF01614 Bacterial transcriptional regulator LQF05_RS18310 PF00171 Aldehyde dehydrogenase family LQF05_RS18315 PF00465 Iron-containing alcohol dehydrogenase LQF05_RS18325 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LQF05_RS18325 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LQF05_RS18330 PF00128 Alpha amylase, catalytic domain LQF05_RS18335 PF00128 Alpha amylase, catalytic domain LQF05_RS18335 PF16657 Maltogenic Amylase, C-terminal domain LQF05_RS18345 PF00156 Phosphoribosyl transferase domain LQF05_RS18355 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LQF05_RS18365 PF01042 Endoribonuclease L-PSP LQF05_RS18370 PF01266 FAD dependent oxidoreductase LQF05_RS18375 PF01037 Lrp/AsnC ligand binding domain LQF05_RS18380 PF01266 FAD dependent oxidoreductase LQF05_RS18385 PF13091 PLD-like domain LQF05_RS18400 PF02743 Cache domain LQF05_RS18400 PF00672 HAMP domain LQF05_RS18400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS18405 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LQF05_RS18405 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LQF05_RS18405 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LQF05_RS18420 PF04002 RadC-like JAB domain LQF05_RS18425 PF04127 DNA / pantothenate metabolism flavoprotein LQF05_RS18425 PF02441 Flavoprotein LQF05_RS18430 PF00692 dUTPase LQF05_RS18435 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LQF05_RS18435 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LQF05_RS18435 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LQF05_RS18435 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LQF05_RS18440 PF00696 Amino acid kinase family LQF05_RS18455 PF00156 Phosphoribosyl transferase domain LQF05_RS18460 PF03372 Endonuclease/Exonuclease/phosphatase family LQF05_RS18470 PF03725 3' exoribonuclease family, domain 2 LQF05_RS18470 PF01138 3' exoribonuclease family, domain 1 LQF05_RS18475 PF03755 YicC-like family, N-terminal region LQF05_RS18475 PF08340 Domain of unknown function (DUF1732) LQF05_RS18480 PF00625 Guanylate kinase LQF05_RS18485 PF01192 RNA polymerase Rpb6 LQF05_RS18490 PF04607 Region found in RelA / SpoT proteins LQF05_RS18490 PF02824 TGS domain LQF05_RS18490 PF13291 ACT domain LQF05_RS18495 PF01042 Endoribonuclease L-PSP LQF05_RS18510 PF00111 2Fe-2S iron-sulfur cluster binding domain LQF05_RS18510 PF01799 [2Fe-2S] binding domain LQF05_RS18515 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LQF05_RS18520 PF00034 Cytochrome c LQF05_RS18520 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LQF05_RS18530 PF00004 ATPase family associated with various cellular activities (AAA) LQF05_RS18530 PF17862 AAA+ lid domain LQF05_RS18530 PF01434 Peptidase family M41 LQF05_RS18535 PF02311 AraC-like ligand binding domain LQF05_RS18535 PF12833 Helix-turn-helix domain LQF05_RS18550 PF04536 TPM domain LQF05_RS18555 PF04011 LemA family LQF05_RS18560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS18560 PF03466 LysR substrate binding domain LQF05_RS18565 PF08240 Alcohol dehydrogenase GroES-like domain LQF05_RS18565 PF00107 Zinc-binding dehydrogenase LQF05_RS18570 PF02515 CoA-transferase family III LQF05_RS18575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQF05_RS18575 PF02770 Acyl-CoA dehydrogenase, middle domain LQF05_RS18575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQF05_RS18580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS18580 PF03466 LysR substrate binding domain LQF05_RS18590 PF00216 Bacterial DNA-binding protein LQF05_RS18595 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQF05_RS18595 PF18113 Rubredoxin binding C-terminal domain LQF05_RS18600 PF00301 Rubredoxin LQF05_RS18605 PF02652 L-lactate permease LQF05_RS18610 PF01274 Malate synthase LQF05_RS18615 PF03928 Haem-degrading LQF05_RS18620 PF02754 Cysteine-rich domain LQF05_RS18620 PF13183 4Fe-4S dicluster domain LQF05_RS18625 PF01565 FAD binding domain LQF05_RS18630 PF02913 FAD linked oxidases, C-terminal domain LQF05_RS18630 PF01565 FAD binding domain LQF05_RS18635 PF07729 FCD domain LQF05_RS18635 PF00392 Bacterial regulatory proteins, gntR family LQF05_RS18640 PF04345 Chorismate lyase LQF05_RS18645 PF01040 UbiA prenyltransferase family LQF05_RS18650 PF00072 Response regulator receiver domain LQF05_RS18650 PF00486 Transcriptional regulatory protein, C terminal LQF05_RS18655 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS18655 PF00989 PAS fold LQF05_RS18655 PF11808 Phosphate regulon sensor protein PhoR LQF05_RS18655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS18660 PF00571 CBS domain LQF05_RS18660 PF03471 Transporter associated domain LQF05_RS18660 PF01595 Cyclin M transmembrane N-terminal domain LQF05_RS18695 PF01476 LysM domain LQF05_RS18695 PF01551 Peptidase family M23 LQF05_RS18695 PF08525 Opacity-associated protein A N-terminal motif LQF05_RS18700 PF00072 Response regulator receiver domain LQF05_RS18715 PF12399 Branched-chain amino acid ATP-binding cassette transporter LQF05_RS18715 PF00005 ABC transporter LQF05_RS18720 PF00005 ABC transporter LQF05_RS18725 PF02653 Branched-chain amino acid transport system / permease component LQF05_RS18735 PF13614 AAA domain LQF05_RS18740 PF00303 Thymidylate synthase LQF05_RS18745 PF01790 Prolipoprotein diacylglyceryl transferase LQF05_RS18750 PF01925 Sulfite exporter TauE/SafE LQF05_RS18760 PF01590 GAF domain LQF05_RS18760 PF05524 PEP-utilising enzyme, N-terminal LQF05_RS18760 PF00391 PEP-utilising enzyme, mobile domain LQF05_RS18760 PF02896 PEP-utilising enzyme, TIM barrel domain LQF05_RS18765 PF00293 NUDIX domain LQF05_RS18785 PF00291 Pyridoxal-phosphate dependent enzyme LQF05_RS18785 PF00585 C-terminal regulatory domain of Threonine dehydratase LQF05_RS18790 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LQF05_RS18795 PF07411 Domain of unknown function (DUF1508) LQF05_RS18805 PF06977 SdiA-regulated LQF05_RS18810 PF01557 Fumarylacetoacetate (FAA) hydrolase family LQF05_RS18815 PF02913 FAD linked oxidases, C-terminal domain LQF05_RS18815 PF01565 FAD binding domain LQF05_RS18820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LQF05_RS18820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LQF05_RS18845 PF00072 Response regulator receiver domain LQF05_RS18845 PF00196 Bacterial regulatory proteins, luxR family LQF05_RS18870 PF00072 Response regulator receiver domain LQF05_RS18870 PF00486 Transcriptional regulatory protein, C terminal LQF05_RS18875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS18885 PF00361 Proton-conducting membrane transporter LQF05_RS18890 PF00361 Proton-conducting membrane transporter LQF05_RS18895 PF00361 Proton-conducting membrane transporter LQF05_RS18895 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LQF05_RS18910 PF03334 Na+/H+ antiporter subunit LQF05_RS18925 PF02554 Carbon starvation protein CstA LQF05_RS18925 PF13722 5TM C-terminal transporter carbon starvation CstA LQF05_RS18935 PF02374 Anion-transporting ATPase LQF05_RS18935 PF17886 HSP20-like domain found in ArsA LQF05_RS18940 PF00106 short chain dehydrogenase LQF05_RS18945 PF00156 Phosphoribosyl transferase domain LQF05_RS18945 PF01738 Dienelactone hydrolase family LQF05_RS18950 PF00156 Phosphoribosyl transferase domain LQF05_RS18950 PF01738 Dienelactone hydrolase family LQF05_RS18955 PF13416 Bacterial extracellular solute-binding protein LQF05_RS18960 PF00563 EAL domain LQF05_RS18960 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS18975 PF00034 Cytochrome c LQF05_RS18985 PF07308 Protein of unknown function (DUF1456) LQF05_RS18990 PF00158 Sigma-54 interaction domain LQF05_RS18990 PF00072 Response regulator receiver domain LQF05_RS18990 PF02954 Bacterial regulatory protein, Fis family LQF05_RS18995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS18995 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS19005 PF12697 Alpha/beta hydrolase family LQF05_RS19015 PF00072 Response regulator receiver domain LQF05_RS19020 PF00989 PAS fold LQF05_RS19020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS19020 PF17203 Single cache domain 3 LQF05_RS19020 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LQF05_RS19025 PF03390 2-hydroxycarboxylate transporter family LQF05_RS19030 PF00672 HAMP domain LQF05_RS19030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS19035 PF03144 Elongation factor Tu domain 2 LQF05_RS19035 PF00009 Elongation factor Tu GTP binding domain LQF05_RS19035 PF00679 Elongation factor G C-terminus LQF05_RS19040 PF02926 THUMP domain LQF05_RS19040 PF02568 Thiamine biosynthesis protein (ThiI) LQF05_RS19045 PF03951 Glutamine synthetase, beta-Grasp domain LQF05_RS19045 PF00120 Glutamine synthetase, catalytic domain LQF05_RS19060 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS19060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS19060 PF00989 PAS fold LQF05_RS19065 PF00072 Response regulator receiver domain LQF05_RS19065 PF00158 Sigma-54 interaction domain LQF05_RS19065 PF02954 Bacterial regulatory protein, Fis family LQF05_RS19075 PF00588 SpoU rRNA Methylase family LQF05_RS19080 PF00384 Molybdopterin oxidoreductase LQF05_RS19085 PF00227 Proteasome subunit LQF05_RS19090 PF07724 AAA domain (Cdc48 subfamily) LQF05_RS19090 PF00004 ATPase family associated with various cellular activities (AAA) LQF05_RS19100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS19100 PF16591 Helical bimodular sensor domain LQF05_RS19100 PF00672 HAMP domain LQF05_RS19110 PF01209 ubiE/COQ5 methyltransferase family LQF05_RS19120 PF03109 ABC1 family LQF05_RS19125 PF01502 Phosphoribosyl-AMP cyclohydrolase LQF05_RS19130 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LQF05_RS19135 PF02416 mttA/Hcf106 family LQF05_RS19140 PF02416 mttA/Hcf106 family LQF05_RS19145 PF00902 Sec-independent protein translocase protein (TatC) LQF05_RS19155 PF03682 Uncharacterised protein family (UPF0158) LQF05_RS19160 PF02580 D-Tyr-tRNA(Tyr) deacylase LQF05_RS19165 PF00561 alpha/beta hydrolase fold LQF05_RS19190 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LQF05_RS19195 PF00343 Carbohydrate phosphorylase LQF05_RS19210 PF00459 Inositol monophosphatase family LQF05_RS19215 PF00293 NUDIX domain LQF05_RS19220 PF13419 Haloacid dehalogenase-like hydrolase LQF05_RS19225 PF13426 PAS domain LQF05_RS19225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS19225 PF00072 Response regulator receiver domain LQF05_RS19230 PF02634 FdhD/NarQ family LQF05_RS19245 PF00465 Iron-containing alcohol dehydrogenase LQF05_RS19250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQF05_RS19250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQF05_RS19250 PF02770 Acyl-CoA dehydrogenase, middle domain LQF05_RS19250 PF12806 Acetyl-CoA dehydrogenase C-terminal like LQF05_RS19255 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LQF05_RS19255 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LQF05_RS19255 PF00378 Enoyl-CoA hydratase/isomerase LQF05_RS19260 PF03466 LysR substrate binding domain LQF05_RS19260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS19265 PF08678 Rsbr N terminal LQF05_RS19265 PF01740 STAS domain LQF05_RS19270 PF01740 STAS domain LQF05_RS19275 PF13581 Histidine kinase-like ATPase domain LQF05_RS19285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS19285 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS19290 PF13426 PAS domain LQF05_RS19290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS19290 PF00072 Response regulator receiver domain LQF05_RS19315 PF00248 Aldo/keto reductase family LQF05_RS19320 PF00672 HAMP domain LQF05_RS19320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS19330 PF00672 HAMP domain LQF05_RS19330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS19330 PF13426 PAS domain LQF05_RS19335 PF09382 RQC domain LQF05_RS19335 PF00270 DEAD/DEAH box helicase LQF05_RS19335 PF00271 Helicase conserved C-terminal domain LQF05_RS19335 PF00570 HRDC domain LQF05_RS19335 PF16124 RecQ zinc-binding LQF05_RS19345 PF00881 Nitroreductase family LQF05_RS19350 PF01293 Phosphoenolpyruvate carboxykinase LQF05_RS19355 PF01430 Hsp33 protein LQF05_RS19365 PF01479 S4 domain LQF05_RS19370 PF08443 RimK-like ATP-grasp domain LQF05_RS19370 PF18030 RimK PreATP-grasp domain LQF05_RS19375 PF18030 RimK PreATP-grasp domain LQF05_RS19375 PF08443 RimK-like ATP-grasp domain LQF05_RS19380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS19380 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS19380 PF00672 HAMP domain LQF05_RS19385 PF00486 Transcriptional regulatory protein, C terminal LQF05_RS19385 PF00072 Response regulator receiver domain LQF05_RS19390 PF00575 S1 RNA binding domain LQF05_RS19390 PF17674 HHH domain LQF05_RS19390 PF16921 Tex protein YqgF-like domain LQF05_RS19390 PF09371 Tex-like protein N-terminal domain LQF05_RS19400 PF04262 Glutamate-cysteine ligase LQF05_RS19410 PF00696 Amino acid kinase family LQF05_RS19410 PF00583 Acetyltransferase (GNAT) family LQF05_RS19415 PF01546 Peptidase family M20/M25/M40 LQF05_RS19415 PF07687 Peptidase dimerisation domain LQF05_RS19420 PF01384 Phosphate transporter family LQF05_RS19425 PF01865 Protein of unknown function DUF47 LQF05_RS19435 PF00437 Type II/IV secretion system protein LQF05_RS19435 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LQF05_RS19445 PF01471 Putative peptidoglycan binding domain LQF05_RS19445 PF03734 L,D-transpeptidase catalytic domain LQF05_RS19450 PF00072 Response regulator receiver domain LQF05_RS19450 PF13188 PAS domain LQF05_RS19450 PF08448 PAS fold LQF05_RS19450 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS19450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS19460 PF02566 OsmC-like protein LQF05_RS19465 PF03480 Bacterial extracellular solute-binding protein, family 7 LQF05_RS19475 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LQF05_RS19490 PF07690 Major Facilitator Superfamily LQF05_RS19495 PF03466 LysR substrate binding domain LQF05_RS19495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS19515 PF03459 TOBE domain LQF05_RS19515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS19520 PF00005 ABC transporter LQF05_RS19525 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS19530 PF00296 Luciferase-like monooxygenase LQF05_RS19535 PF09084 NMT1/THI5 like LQF05_RS19540 PF03358 NADPH-dependent FMN reductase LQF05_RS19545 PF10417 C-terminal domain of 1-Cys peroxiredoxin LQF05_RS19545 PF00578 AhpC/TSA family LQF05_RS19550 PF00005 ABC transporter LQF05_RS19555 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS19560 PF09084 NMT1/THI5 like LQF05_RS19565 PF03573 outer membrane porin, OprD family LQF05_RS19570 PF09084 NMT1/THI5 like LQF05_RS19575 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LQF05_RS19575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQF05_RS19585 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS19590 PF00005 ABC transporter LQF05_RS19600 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LQF05_RS19605 PF00158 Sigma-54 interaction domain LQF05_RS19615 PF10055 Uncharacterized small protein (DUF2292) LQF05_RS19625 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS19630 PF00528 Binding-protein-dependent transport system inner membrane component LQF05_RS19635 PF12857 TOBE-like domain LQF05_RS19635 PF00005 ABC transporter LQF05_RS19640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LQF05_RS19640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LQF05_RS19660 PF02222 ATP-grasp domain LQF05_RS19660 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LQF05_RS19665 PF00731 AIR carboxylase LQF05_RS19670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS19670 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS19675 PF01261 Xylose isomerase-like TIM barrel LQF05_RS19675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LQF05_RS19680 PF00501 AMP-binding enzyme LQF05_RS19680 PF13193 AMP-binding enzyme C-terminal domain LQF05_RS19685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS19685 PF03466 LysR substrate binding domain LQF05_RS19690 PF00206 Lyase LQF05_RS19690 PF10415 Fumarase C C-terminus LQF05_RS19695 PF00375 Sodium:dicarboxylate symporter family LQF05_RS19705 PF01235 Sodium:alanine symporter family LQF05_RS19710 PF00710 Asparaginase, N-terminal LQF05_RS19710 PF17763 Glutaminase/Asparaginase C-terminal domain LQF05_RS19720 PF00484 Carbonic anhydrase LQF05_RS19725 PF04960 Glutaminase LQF05_RS19740 PF00364 Biotin-requiring enzyme LQF05_RS19740 PF00682 HMGL-like LQF05_RS19740 PF02436 Conserved carboxylase domain LQF05_RS19745 PF02785 Biotin carboxylase C-terminal domain LQF05_RS19745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LQF05_RS19745 PF00289 Biotin carboxylase, N-terminal domain LQF05_RS19750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS19750 PF03466 LysR substrate binding domain LQF05_RS19760 PF01380 SIS domain LQF05_RS19760 PF01418 Helix-turn-helix domain, rpiR family LQF05_RS19760 PF02685 Glucokinase LQF05_RS19765 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LQF05_RS19765 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LQF05_RS19770 PF00583 Acetyltransferase (GNAT) family LQF05_RS19775 PF00202 Aminotransferase class-III LQF05_RS19780 PF06339 Ectoine synthase LQF05_RS19785 PF05721 Phytanoyl-CoA dioxygenase (PhyH) LQF05_RS19790 PF00696 Amino acid kinase family LQF05_RS19790 PF13840 ACT domain LQF05_RS19795 PF04325 Protein of unknown function (DUF465) LQF05_RS19800 PF01136 Peptidase family U32 LQF05_RS19800 PF16325 Peptidase family U32 C-terminal domain LQF05_RS19805 PF00563 EAL domain LQF05_RS19805 PF00990 Diguanylate cyclase, GGDEF domain LQF05_RS19805 PF03707 Bacterial signalling protein N terminal repeat LQF05_RS19810 PF13361 UvrD-like helicase C-terminal domain LQF05_RS19810 PF00580 UvrD/REP helicase N-terminal domain LQF05_RS19815 PF03480 Bacterial extracellular solute-binding protein, family 7 LQF05_RS19825 PF00561 alpha/beta hydrolase fold LQF05_RS19830 PF02566 OsmC-like protein LQF05_RS19835 PF12833 Helix-turn-helix domain LQF05_RS19835 PF12852 Cupin LQF05_RS19845 PF13247 4Fe-4S dicluster domain LQF05_RS19845 PF09163 Formate dehydrogenase N, transmembrane LQF05_RS19850 PF01292 Prokaryotic cytochrome b561 LQF05_RS19855 PF04216 Protein involved in formate dehydrogenase formation LQF05_RS19860 PF12390 Selenocysteine synthase N terminal LQF05_RS19860 PF03841 L-seryl-tRNA selenium transferase LQF05_RS19865 PF00009 Elongation factor Tu GTP binding domain LQF05_RS19865 PF03144 Elongation factor Tu domain 2 LQF05_RS19865 PF09106 Elongation factor SelB, winged helix LQF05_RS19865 PF09107 Elongation factor SelB, winged helix LQF05_RS19885 PF01597 Glycine cleavage H-protein LQF05_RS19900 PF00582 Universal stress protein family LQF05_RS19905 PF01966 HD domain LQF05_RS19905 PF11871 Domain of unknown function (DUF3391) LQF05_RS19910 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS19910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS19910 PF02743 Cache domain LQF05_RS19915 PF00158 Sigma-54 interaction domain LQF05_RS19915 PF00072 Response regulator receiver domain LQF05_RS19915 PF02954 Bacterial regulatory protein, Fis family LQF05_RS19920 PF08281 Sigma-70, region 4 LQF05_RS19920 PF04542 Sigma-70 region 2 LQF05_RS19925 PF03795 YCII-related domain LQF05_RS19935 PF00593 TonB dependent receptor LQF05_RS19935 PF07715 TonB-dependent Receptor Plug Domain LQF05_RS19950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS19950 PF13426 PAS domain LQF05_RS19950 PF00072 Response regulator receiver domain LQF05_RS19955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQF05_RS19955 PF02770 Acyl-CoA dehydrogenase, middle domain LQF05_RS19955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQF05_RS19960 PF10282 Lactonase, 7-bladed beta-propeller LQF05_RS19975 PF05175 Methyltransferase small domain LQF05_RS19990 PF00107 Zinc-binding dehydrogenase LQF05_RS19990 PF13823 Alcohol dehydrogenase GroES-associated LQF05_RS19990 PF08240 Alcohol dehydrogenase GroES-like domain LQF05_RS20000 PF03466 LysR substrate binding domain LQF05_RS20000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS20005 PF17191 RecG wedge domain LQF05_RS20005 PF00271 Helicase conserved C-terminal domain LQF05_RS20005 PF00270 DEAD/DEAH box helicase LQF05_RS20020 PF05134 Type II secretion system (T2SS), protein L LQF05_RS20020 PF12693 GspL periplasmic domain LQF05_RS20025 PF03934 Type II secretion system (T2SS), protein K LQF05_RS20030 PF07963 Prokaryotic N-terminal methylation motif LQF05_RS20030 PF11612 Type II secretion system (T2SS), protein J LQF05_RS20035 PF07963 Prokaryotic N-terminal methylation motif LQF05_RS20035 PF02501 Type II secretion system (T2SS), protein I LQF05_RS20040 PF12019 Type II transport protein GspH LQF05_RS20040 PF07963 Prokaryotic N-terminal methylation motif LQF05_RS20045 PF08334 Type II secretion system (T2SS), protein G LQF05_RS20045 PF07963 Prokaryotic N-terminal methylation motif LQF05_RS20050 PF00482 Type II secretion system (T2SS), protein F LQF05_RS20055 PF00437 Type II/IV secretion system protein LQF05_RS20065 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LQF05_RS20065 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LQF05_RS20070 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LQF05_RS20075 PF02233 NAD(P) transhydrogenase beta subunit LQF05_RS20080 PF02525 Flavodoxin-like fold LQF05_RS20085 PF13593 SBF-like CPA transporter family (DUF4137) LQF05_RS20090 PF12833 Helix-turn-helix domain LQF05_RS20090 PF02311 AraC-like ligand binding domain LQF05_RS20135 PF04717 Type VI secretion system, phage-baseplate injector LQF05_RS20140 PF05638 Type VI secretion system effector, Hcp LQF05_RS20145 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LQF05_RS20145 PF00476 DNA polymerase family A LQF05_RS20145 PF01612 3'-5' exonuclease LQF05_RS20145 PF01367 5'-3' exonuclease, C-terminal SAM fold LQF05_RS20155 PF01636 Phosphotransferase enzyme family LQF05_RS20160 PF11892 Domain of unknown function (DUF3412) LQF05_RS20160 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LQF05_RS20160 PF03641 Possible lysine decarboxylase LQF05_RS20175 PF00471 Ribosomal protein L33 LQF05_RS20180 PF00830 Ribosomal L28 family LQF05_RS20185 PF13193 AMP-binding enzyme C-terminal domain LQF05_RS20185 PF00501 AMP-binding enzyme LQF05_RS20190 PF09339 IclR helix-turn-helix domain LQF05_RS20205 PF07690 Major Facilitator Superfamily LQF05_RS20225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQF05_RS20225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQF05_RS20225 PF02770 Acyl-CoA dehydrogenase, middle domain LQF05_RS20230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQF05_RS20230 PF02770 Acyl-CoA dehydrogenase, middle domain LQF05_RS20230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQF05_RS20235 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LQF05_RS20235 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LQF05_RS20235 PF00378 Enoyl-CoA hydratase/isomerase LQF05_RS20240 PF00486 Transcriptional regulatory protein, C terminal LQF05_RS20240 PF00072 Response regulator receiver domain LQF05_RS20245 PF00171 Aldehyde dehydrogenase family LQF05_RS20250 PF01322 Cytochrome C' LQF05_RS20255 PF01292 Prokaryotic cytochrome b561 LQF05_RS20280 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE LQF05_RS20290 PF14331 ImcF-related N-terminal domain LQF05_RS20290 PF06761 Intracellular multiplication and human macrophage-killing LQF05_RS20290 PF06744 Type VI secretion protein IcmF C-terminal LQF05_RS20300 PF00069 Protein kinase domain LQF05_RS20305 PF04717 Type VI secretion system, phage-baseplate injector LQF05_RS20325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS20325 PF03466 LysR substrate binding domain LQF05_RS20330 PF01266 FAD dependent oxidoreductase LQF05_RS20335 PF16591 Helical bimodular sensor domain LQF05_RS20335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQF05_RS20335 PF00672 HAMP domain LQF05_RS20350 PF00698 Acyl transferase domain LQF05_RS20355 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG LQF05_RS20365 PF01039 Carboxyl transferase domain LQF05_RS20370 PF06857 Malonate decarboxylase delta subunit (MdcD) LQF05_RS20375 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LQF05_RS20380 PF16957 Malonate decarboxylase, alpha subunit, transporter LQF05_RS20385 PF00106 short chain dehydrogenase LQF05_RS20405 PF16868 NMT1-like family LQF05_RS20445 PF00296 Luciferase-like monooxygenase LQF05_RS20455 PF07311 Dodecin LQF05_RS20460 PF02798 Glutathione S-transferase, N-terminal domain LQF05_RS20480 PF02872 5'-nucleotidase, C-terminal domain LQF05_RS20480 PF00149 Calcineurin-like phosphoesterase LQF05_RS20480 PF17936 Bacterial Ig domain LQF05_RS20495 PF03575 Peptidase family S51 LQF05_RS20500 PF00005 ABC transporter LQF05_RS20500 PF00664 ABC transporter transmembrane region LQF05_RS20550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQF05_RS20550 PF03466 LysR substrate binding domain LQF05_RS20565 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LQF05_RS20565 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LQF05_RS20565 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LQF05_RS20565 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LQF05_RS20575 PF08240 Alcohol dehydrogenase GroES-like domain LQF05_RS20585 PF00132 Bacterial transferase hexapeptide (six repeats) LQF05_RS20590 PF01432 Peptidase family M3 LQF05_RS20605 PF01757 Acyltransferase family LQF05_RS20610 PF04055 Radical SAM superfamily LQF05_RS20615 PF00484 Carbonic anhydrase LQF05_RS20620 PF01740 STAS domain LQF05_RS20620 PF00916 Sulfate permease family LQF05_RS20630 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LQF05_RS20630 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LQF05_RS20635 PF00115 Cytochrome C and Quinol oxidase polypeptide I LQF05_RS20640 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 LQF05_RS20645 PF00510 Cytochrome c oxidase subunit III LQF05_RS20670 PF01040 UbiA prenyltransferase family LQF05_RS20675 PF02630 SCO1/SenC LQF05_RS20685 PF00593 TonB dependent receptor LQF05_RS20685 PF07715 TonB-dependent Receptor Plug Domain LQF05_RS20695 PF08281 Sigma-70, region 4 LQF05_RS20695 PF04542 Sigma-70 region 2 LQF05_RS20710 PF02492 CobW/HypB/UreG, nucleotide-binding domain LQF05_RS20710 PF07683 Cobalamin synthesis protein cobW C-terminal domain LQF05_RS20725 PF01590 GAF domain LQF05_RS20725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS20725 PF00360 Phytochrome region LQF05_RS20725 PF08446 PAS fold LQF05_RS20725 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS20730 PF00072 Response regulator receiver domain LQF05_RS20735 PF13188 PAS domain LQF05_RS20735 PF08448 PAS fold LQF05_RS20735 PF00512 His Kinase A (phospho-acceptor) domain LQF05_RS20735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQF05_RS20735 PF00072 Response regulator receiver domain LQF05_RS20740 PF01126 Heme oxygenase LQF05_RS20745 PF01380 SIS domain LQF05_RS20750 PF00455 DeoR C terminal sensor domain LQF05_RS20750 PF08220 DeoR-like helix-turn-helix domain LQF05_RS20755 PF01810 LysE type translocator LQF05_RS20760 PF00132 Bacterial transferase hexapeptide (six repeats) LQF05_RS20760 PF14602 Hexapeptide repeat of succinyl-transferase LQF05_RS20760 PF12804 MobA-like NTP transferase domain LQF05_RS20765 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LQF05_RS20765 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LQF05_RS20770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LQF05_RS20770 PF02874 ATP synthase alpha/beta family, beta-barrel domain LQF05_RS20775 PF00231 ATP synthase LQF05_RS20780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LQF05_RS20780 PF00306 ATP synthase alpha/beta chain, C terminal domain LQF05_RS20780 PF02874 ATP synthase alpha/beta family, beta-barrel domain LQF05_RS20785 PF00213 ATP synthase delta (OSCP) subunit LQF05_RS20790 PF00430 ATP synthase B/B' CF(0) LQF05_RS20795 PF00137 ATP synthase subunit C LQF05_RS20800 PF00119 ATP synthase A chain LQF05_RS20805 PF03899 ATP synthase I chain LQF05_RS20810 PF02195 ParB-like nuclease domain LQF05_RS20810 PF17762 HTH domain found in ParB protein LQF05_RS20815 PF13614 AAA domain LQF05_RS20820 PF02527 rRNA small subunit methyltransferase G LQF05_RS20825 PF13932 GidA associated domain LQF05_RS20825 PF01134 Glucose inhibited division protein A LQF05_RS20830 PF03334 Na+/H+ antiporter subunit LQF05_RS20845 PF00361 Proton-conducting membrane transporter LQF05_RS20850 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LQF05_RS20855 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LQF05_RS20860 PF13244 Domain of unknown function (DUF4040) LQF05_RS20860 PF00361 Proton-conducting membrane transporter LQF05_RS20860 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LQF05_RS20865 PF01926 50S ribosome-binding GTPase LQF05_RS20865 PF12631 MnmE helical domain LQF05_RS20865 PF10396 GTP-binding protein TrmE N-terminus LQF05_RS20870 PF02096 60Kd inner membrane protein LQF05_RS20870 PF14849 YidC periplasmic domain LQF05_RS20875 PF01809 Putative membrane protein insertion efficiency factor LQF05_RS20880 PF00825 Ribonuclease P LQF05_RS20885 PF00468 Ribosomal protein L34