        recF NONE
        gyrB    6168 ..    6185 + -14.1  -4.61873   GTGATGCAAAAGGAA             CCCCGGC CTCG GCCGGGG              TTTTCGTTTCTAGCA 100 62
        ahpF    7916 ..    7941 + -19.1  -4.66833   GCTCGGTAAACAAAA         GGGGAGCAACC CTGA GGTTGCTCCCC          TTTTTCGCGTTCACG 100 45
LQF05_RS00055 NONE
LQF05_RS00060 NONE
LQF05_RS00065   15722 ..   15734 + -10.5   -3.5393   CCGCGAGCGTTCGCT                GCGGC GAT GCCGC                TTTCCCAGGCCTCGT  69 116
LQF05_RS00115   25026 ..   25043 + -14.1  -4.77036   CCCTGAACTAAGAAA             GCCCCGC GAAT GCGGGGC              TTTTTCATGCTGCGA 100 35
        dprA   26308 ..   26338 +  -3.3  -2.73542   GCGCCTTGGGTACAC       TGCCGGCTTTT CATCCAGGC AGAGGTCGGCA       TGATTGGCGATTGGC  41 133
LQF05_RS00125   26906 ..   26945 + -15.6  -3.01712   CCTGACCCGGCGAAT  CGACGGCGG-CGCGGCTGC CCT GCAGCGGCGGCCGCCACCG  TGTTCAGGGCAGCAG  83 36
        hemF NONE
        aroE   29912 ..   29936 +  -6.4  -3.05384   GGCTGAGAGGGCTCT          TGGCCGGC CAAATGCCC GCTGGCCA          TTGGCTGGCCGACGC  52 35
        pbpG   32182 ..   32196 +  -4.3  -4.07885   TCGATGGGCTTTCTT               GAGTT TGCGC AACTC               TTTTCCCCGAGAGTC  61 93
LQF05_RS00160   32649 ..   32671 +  -7.6   -3.2056   CGCGCCTCACCCCTC           GCCTGACGCC CTC GGCGTCACCC           TTAGTCGCTGTGCCT  57 20
LQF05_RS00165 NONE
LQF05_RS00170   36322 ..   36345 +  -8.8  -3.43785   GCGCCGGCCGGTTCA          GCCGCC-GCGG TTG TCGTAGGCGGC          TTCGTTGCTGTCCTG  66 7
        treS NONE
LQF05_RS00185   41015 ..   41030 + -11.8  -3.86194   GGCGAAAACGAAAAA              CCCCGC CGAG GCGGGG               TTTCTGACGCGGGTT  82 94
        katE   46287 ..   46313 + -12.2  -3.08358   GAGAAACTCCGGCGC         CGCGTCGCGGAA CAA TGCGGCGACGCG         TATCTCCTTCTTTGC  69 339
        znuA   50158 ..   50168 +  -3.2  -4.32034   CCAGGTCGATGGCCT                 TCTG GAA CAGG                 TTTTCCTGCTGATAG  64 454
LQF05_RS00240   52866 ..   52892 +  -7.2  -4.18762   CCTGGATTCAGCTCT         GACGGCATCCGT AGG GTGGATGTCGCC         TTTTACATCCACCTT  71 24
LQF05_RS00295   69441 ..   69464 +  -6.7  -3.60792   CTGATCGGCTCCTTC         G--CCGGGCGC TGTG GCGCCCGGAAC          TTTGCGCCTTGGCGC  60 44
LQF05_RS00300   70800 ..   70824 +  -6.4  -3.29144   GTGCTGGTTGCCCTC         GGGCGTC-GCA GCGC TGCCGGCGTCC          TTGTGCAGCAGATAG  54 276
LQF05_RS00330   76285 ..   76302 +  -7.7  -2.71712   GCACGACAACGCTGA             GGCCG-AC CCT GTACGGCC             ATTTCCCAGCAACCC  53 26
LQF05_RS00335 NONE
LQF05_RS00340   79152 ..   79169 +  -4.7  -2.76696   TAAGGTTGACGAATG             CCGGCCG TGTG CGTTCGG              GTTGTTGAAAAGACG  43 66
LQF05_RS00345   80573 ..   80600 +  -4.8  -3.81951   CCGTCGCAAGCCCCT        GCG-TCTGCGC ATGCATC GCGCCGACCGC        TTTCGTCATCTCAAA  60 173
LQF05_RS00355   81888 ..   81911 +  -2.2  -5.37593   AGCAACGACTCATAG          ATAGCCCGGC TCTG GCCGGCCAAC           TTTTTTCATTTCGGG  85 125
        potA NONE
LQF05_RS00365 NONE
LQF05_RS00370   84899 ..   84916 + -12.7  -4.06904   TGAGCAACAAAGAAA             GGGCGCA TTGA TGCGCCC              TTTCTCATTCCGTCC  89 45
LQF05_RS00380   86933 ..   86947 +  -4.2  -3.55444   CCAGATGGCGAATCA               GCAGCT GCC GGTTGC               TTTCGGCCGTCACCC  51 401
LQF05_RS00390   88529 ..   88541 +  -2.6  -3.05384   GCAGGAACATCCACG                GCTG CAGGC CGGC                TTCGATCACCCAGGC  42 455
        hisB NONE
        hisH NONE
LQF05_RS00655 NONE
        hisA  151191 ..  151225 +  -3.5  -3.05384   GAAAGACGAGTAAGC    CGTAAGGCGGACCACGC TCC GCGTG--CCGCCATGCA    TTCGGTGACCCGGCG  43 28
        hisF NONE
LQF05_RS00670  152930 ..  152970 + -10.9  -3.28791   TCAGGCGGGTGATGG  CGGCGCGCCAGCAGGGTGC GCC GCACACGCCTCTCGCGCCG  TTCTGGCGCACCCAT  72 73
LQF05_RS00675  153966 ..  153996 +  -6.1  -2.66435   CCCTGCGCAGTCAGG      CGC-GGCAGTTCCCG CTC CAGGAGC-GCCAGCG      TGCTCTCGTGGGGGT  46 132
LQF05_RS00700 NONE
        grxC NONE
        secB  160729 ..  160779 +   -11  -3.34013   GGCTTCCTCGAACAG CTTGCCGCCCACCGGGTCGTAGAT CAC ATCCACGCCCTGGCCGCCGGTAAG TTCCTTCAGCCGCTC  70 407
LQF05_RS00720  162047 ..  162069 +    -2  -5.02074   TCGGTGTCGCTTACC          GGCATGACCG AGAGG CGG-C-TGCC          TTTTTTCACCAGTGC  79 70
LQF05_RS00730  162809 ..  162826 +  -9.8  -3.55444   GCAACGCTGACCGAG             CGCCGC ATGGAC GCGGCG              TTTCAGCGCTCGACG  70 31
LQF05_RS00755 NONE
        pepP NONE
        ubiH NONE
LQF05_RS00770 NONE
LQF05_RS00775 NONE
LQF05_RS00780  170405 ..  170430 +   -14  -4.79223   GCTGCGGTTATACTT         CG-CGCCCCGG CTTGT CCGGGGCGTCG         TTTTTCCTGCTGTCG 100 92
LQF05_RS00785  172060 ..  172081 +  -7.2  -3.60296   GTCGCTCGGCCAGGC           GCGTCGGC TAGCCT GCCGAGGC            TTTCCGGTGGCGCTG  60 15
        gcvT NONE
        gcvH  173817 ..  173844 + -15.7   -5.0133   CCTAAGCATCATCCG        CAAAAGCCCCG CTCTGT CGGGGCTTTTG         TTTTTTCCGAGAGTA 100 36
        gcvP  176729 ..  176746 +  -6.3  -3.40403   GCGTGCCGGTGGACG             CCTATCG TGAC TGATAGG              TTGTGATGGAGAGGG  52 12
LQF05_RS00810  178507 ..  178548 + -24.6  -3.55761   CATCCGCGGGCTGAC CG-AGAAGGGCGTCCGGGC CGAAA GCCCGGGCGCCCTTCTGCG TTTAGGGGCTGGCTA 100 44
LQF05_RS00815 NONE
LQF05_RS00820 NONE
LQF05_RS00825  182029 ..  182059 +  -6.7  -2.87132   TTCGGGACGCAATCG       TGTCGAGCCAGCC TGACC GGCTGGCCTGGCC       TGTATCCGGGCGCCC  51 10
LQF05_RS00830  183002 ..  183036 +  -4.9  -3.04461   TCAGTCTCGAGTCGG    CCAGGGCCGC-GCTGCG GTG CTCGGCGGCAGCC-TGG    TATTCGCGGTCGCTG  47 63
LQF05_RS00850 NONE
LQF05_RS00855 NONE
LQF05_RS00860  187937 ..  187953 +  -9.3  -2.95298   TCGCTGATCTTCGGC              CGCGGCC GCG GACCGCG              TGTCTGATGCGTCGA  59 2
LQF05_RS00865  189634 ..  189660 + -11.6  -3.55622   GCACCAAATGAAAAA        CCCCGG-CACG CTCGCA CGTGACCGGGG         TTTCAGACGCTTCCG  74 74
LQF05_RS00880  195676 ..  195720 + -11.4   -5.5353   GGACCTGATAGCTAA GGCGCCAGCCG-TG-ACATCCC TCC GGGATGAACCTCGACTGGCGCC TTTTTTATTGCTCTG 100 192
LQF05_RS00885 NONE
LQF05_RS00890  197753 ..  197766 +  -8.1  -3.37344   ACAGTGGCATCATGG               CGACG AGCG CGTCG                TTGGTTAAATGGCGC  59 78
LQF05_RS00895  200150 ..  200203 +  -2.1  -3.64703   CCAGCTCGCGGGCCA GCTGCGAGAGGTCCAGGCGCTGCGCG CCA CCCTCGGCGA-TGGACTGTGCGCCGC TTTCGATGCGCGCCA  50 422
LQF05_RS00910 NONE
LQF05_RS00915  204322 ..  204335 +  -3.1  -3.01791   CCTGAGGTATCCCGT               CATGT ACGT ACGTG                TCTTCGCCGCGGCGT  43 103
LQF05_RS00920 NONE
LQF05_RS00925 NONE
LQF05_RS00930  207317 ..  207351 +   -12  -3.25823   GCTAGGCGGGACGCC     CCGGCAGGTGCGGCTC GCT GGGCAGCACCTCACGG     TTGGTGTCGCCGGCA  69 36
        recC  213638 ..  213654 + -15.1   -3.1364   ACACCCCGCATCCAG              CCCCGGC TGC GCCGGGG              TTCCCTCGTTCCATC  82 153
        recB  217742 ..  217753 +  -3.6  -3.72576   TGACCGCGACAATGG                GCGT GGCA GCGC                 TTTCCTGCCGACCAG  54 60
        recD  219676 ..  219691 +  -5.4  -3.48063   CGCGGCTCATCGCCT              CCGTTT CGTG AAGCGG               TTGTGGGTTTGGCTG  55 73
LQF05_RS00960  220444 ..  220462 +  -2.3  -3.53343   AGACGTACCGCGCAG             TTCCAGC CCAGC GCCGGGA             TTTCCCCGCCCAGTT  47 267
LQF05_RS00970  222898 ..  222908 +  -2.4  -4.51812   CTTTCATCGGTCGGA                 CTCG CGG CGCG                 TTTGTTGTTCTGGCG  66 446
LQF05_RS00980  224180 ..  224190 +  -3.2  -3.14686   CTGGCTGTAACTTTT                 CTGT CAC ACGG                 CTTTATTAGATTAGG  45 127
LQF05_RS00985 NONE
        pstA  228217 ..  228275 + -17.2  -2.52464   GCTGGATCATTGATT GGCGCCGCCAGCCGCATCGTGGGCTTCC GAG GGAAGCACCCGGCGCGGATGGCGGCCTG TAGCTTGCAGCCCGA  83 28
        pstB  229155 ..  229165 +  -8.2  -3.29043   CCGGCCATGGCAAAC                 CGCG CTG CGCG                 TTGTCGGCGGCGCTT  59 41
        phoU  230031 ..  230046 + -10.4  -2.88544   GGCGCGCCGGTAGCG              GTGGGC GCCA GCCCAC               TGTCTGCGGATGCGC  62 43
LQF05_RS01010  232407 ..  232452 + -17.5  -3.01791   CCGCCGACCATCAGG TCGACGCCGGCACCGGCCGCGG CAC CTGCGGCCA-TGCCGCCGCCGA TCTTCACGCCCAGCT  88 449
LQF05_RS01030  236637 ..  236654 + -10.5  -3.16676   TTCGAGACCTGGCAA             CGGCGCT GATC GGCGCCG              TCTTCGCTTGATCGG  65 17
LQF05_RS01035  237503 ..  237513 +  -3.2  -3.87815   ACGCCATCGCGCCGC                 TCGA CCT TCGG                 TTTGTGCGAGTGGCC  56 148
LQF05_RS01045 NONE
LQF05_RS01050  240889 ..  240907 + -11.7  -5.45652   AGCGCGCATGAAAAA             GCCCGAC GCAAG GTCGGGC             TTTTTTGTTGCGGCT 100 39
LQF05_RS01060  244496 ..  244515 +   -10  -3.75598   GATCGGTGATCACCA            CGTCGAAG CGCT CTTCGGCG             TTCTTCAGTTCCTTC  74 389
LQF05_RS01075  247021 ..  247042 +  -7.9  -2.56095   GGGATGACGCTCCGG           CGCCGGCCT GCTA AGGTCGGCA            TCCCTTCGCTGTAAC  52 34
        mutM  247922 ..  247936 +    -7  -2.66316   CGGCGTTCACGCCCC               GCGGGC CCT GGCCGC               TGCTATAGTGGCCGC  49 66
LQF05_RS01085 NONE
LQF05_RS01090  250311 ..  250356 +  -4.6  -3.31144   CACTTTCAGCGCGCG GCCGATGCCGCGCGGGTCGCTG GCCG CTTCGACCT-TGCCGC-TCGGC TTGTGCCAGTAGAGC  51 60
LQF05_RS01125  257647 ..  257680 +  -3.8  -3.21099   CCTGCAGCGGACCCA    GGCGCTG-CAGGGCGC CCAG GTGCTCGGTCAG-GCC     TTCATGCTGGAAACG  47 360
LQF05_RS01135  258987 ..  258998 +  -3.6  -3.70902   GGCCGAGGCTGGAAG                GCGG CGCT TCGC                 TTTCGGTGTAGACCC  54 135
        ftsY NONE
        ftsE NONE
        ftsX NONE
        rpoH  266528 ..  266553 + -15.5  -5.83822   TTCAGCAGAAATAGA         TCGCGGGATGCC GAC GGC-TCCCGCGA         TTTTTTTTGCCTGTC 100 46
LQF05_RS01190  272533 ..  272576 + -18.8  -3.14344   TGGCGCTGGCGGGCT GGCGCA-TCCGCGGCTGAGCG GGA CGAACGGCCGCGGGGTGCGCC TTGGTGCACCGGGTG  91 9
        thiS NONE
LQF05_RS01200  273720 ..  273749 + -22.9  -5.47431   GCTGAAACGATTCGT       GGCCGGCCTCGAC CGTG GTCGGGGCCGGCC        TTTTTTATGTCTTGC 100 36
        trmB  274651 ..  274688 +    -7  -2.71364   AGACAACAAATGCAA  TGC-CGTCAGCCGGGCAT GGCC ATGCCCTGC-GTCGCGCA   TAATTGGGGGAGTAG  50 186
LQF05_RS01210  276060 ..  276086 + -14.4  -4.58395   GGATCACCGGGGTAA         ACGAAGGGCGCC ACT GGCGCCCTTTGC         TTTTTCACGCCTGGC 100 41
LQF05_RS01235  281887 ..  281899 + -10.5  -2.53263   GCAGACCCCGAGCCT                CGGCG TCG CGCCG                TGGCTTGGCGATCGC  58 463
        pilT NONE
LQF05_RS01295  292783 ..  292808 + -15.5  -2.57132   TTCGCCGCCGGGGTC         GGCAGCGCTCTG CGC CAG-GCGCTGCC         ATTGTGGCGGGCAGG  77 262
LQF05_RS01310  295496 ..  295516 +  -8.9  -2.51173   GCTCGGTTTCACCGA            ACGGCGCCA GCT TGGCGTCGG            CTTCGTGCGGTTGAT  52 400
        pilG NONE
        pilH NONE
LQF05_RS01360  302691 ..  302708 +  -9.1  -4.56736   TTGAGTTGTAGGTGG             GGTCGAC CGAG GTCGGCC              TTTTGGTTCTTGGAT  84 37
LQF05_RS01365  304791 ..  304806 +  -4.7  -2.50816   TACCCTGCCGGATGC              TCAGG ATCAGG CCTGA               CTTGATGGGTGCGGC  42 10
LQF05_RS01370 NONE
LQF05_RS01375 NONE
LQF05_RS01380 NONE
LQF05_RS01385  314917 ..  314939 +  -2.7  -3.64703   GAGGCGGACCTCGCA          TCGCT-CGCT GATC AGCGGGGTGA           TTTCGCTGACGCCCA  50 417
LQF05_RS01400  317447 ..  317462 +  -4.7  -3.14344   CGCTGATGCGCATGC              TCGGT CGCAGC ACCGA               TTAATCACCCCGATA  48 6
LQF05_RS01405  318085 ..  318109 + -17.2  -2.52676   AGACGTGTGAAGCAC          GAACGCCGGC CGCCA GCCGGCGTTC          TGCGTTGGAGCGATG  83 45
LQF05_RS01410  319430 ..  319454 +  -4.8   -3.1994   GGGGCGTCTGCACAG          CCCCAAGGCC AAGAA GGCTGAGGGG          TTCCTAGCTCATGTC  48 5
LQF05_RS01415 NONE
        adeC  324075 ..  324093 + -17.4   -4.4078   CTGCAGATGCGAAAA             CGCCGCCC AGT GGGCGGCG             TTTTCGTTCCGGCGC 100 80
LQF05_RS01440  329274 ..  329291 +  -7.7  -3.28119   TTCAACCGCCCACGG             GCG-GGGA TAA TCCCGCGC             TTCGTATCCGTGAGT  59 88
LQF05_RS01445  329749 ..  329782 +    -6   -3.8046   CCTGCCACAACGAGT    TCC-GCGCCTACTGAG GCGG CTCAGC-GGCGCAGGG     TTTCCAGTTTTTCCC  60 12
LQF05_RS01465 NONE
LQF05_RS01470  335186 ..  335203 + -14.1  -4.27316   AGCCGCACACGAAAA             CGCCCGC AGAT GCGGGCG              TTTTCAATTACAGCA 100 40
LQF05_RS01500 NONE
         tkt NONE
         epd NONE
LQF05_RS01515  345144 ..  345174 +  -8.8  -3.78934   GCCCGCTGATGCAGA       CGGCAACCCCGGCG GCT CGCCGTGGTCTCTG       TTCTTATCGGAACAA  71 80
LQF05_RS01520 NONE
LQF05_RS01525  345768 ..  345792 +  -9.9   -5.0133   CGGACCATCGGTTAC          TGCGGCCTCGC GAT GCGAGGCTACG          TTTTTTAAAGCGCTG 100 41
         fba  347010 ..  347039 + -17.3  -3.89822   TTGATCGATCGGACA       TGAAAAAGCCCGC GTTT GCGGGCTTTTTCG        TTTCTGCGCTGCATG 100 37
LQF05_RS01540  348332 ..  348367 + -12.6  -4.26305   GCAAGGCTTCTCGCG    GC-TGACGCAGGCCGCA GAA TGCAACCTGCGTCACGC    TTTGTATTGCGTTTT  95 21
LQF05_RS01545 NONE
LQF05_RS01550  349442 ..  349472 +    -6  -4.01888   ACGTGCATCAATAGT       GCGACCAGGCGTCG CTG CGACCCTTGATGGC       TTTCTAGTATCAACT  65 117
LQF05_RS01555  351792 ..  351812 +  -6.7  -2.87132   ACGACCCGCTCCCGG            CCTGTCTGC CTG GCTGACCGG            TATCTGCGCGCCGCC  51 9
LQF05_RS01560  352289 ..  352309 + -14.7  -2.78384   AAGCGCGGCCCGGCA            CCCTGGGCC GCG GGCTCAGGG            TGTCATGCGCAGGAG  77 39
LQF05_RS01565  352864 ..  352897 +  -2.4   -3.2794   TGCGCGTGAAAACCT     C-CCCCAGCAGCG TCTTGAGCT CGATGTTGGGGCG     TTCCTGTCGCTGCGC  44 375
LQF05_RS01575  354749 ..  354764 +  -5.4  -3.82486   CCGGAATCTGTTCGA              GCTGCTG CGC CAGC-GC              TTCTTCCTCTTCGCT  60 156
LQF05_RS01590  358989 ..  359038 + -14.4  -2.87211   CACGGCGGGTCAGCC TGCCTGCTAGACGCAGGTCGC CAACTGCAC GCGACCTGCGTCGAAC-GGCA TCTGTCCGGCCAGGT  79 16
LQF05_RS01595 NONE
LQF05_RS01600  361810 ..  361833 + -16.8  -5.40474   AGGTTGAGGTAGAAG          TCGGGCTTCC AATT GGAAGCCCGA           TTTTTTTAGGGGAGT 100 79
LQF05_RS01605  362422 ..  362446 +  -8.5  -3.00704   CGTCACTTCATGCGT          GGGCGGCCTGA GAT TTGGGTCGTCC          TGTCCTTTCGGGCAT  56 75
LQF05_RS01625  368250 ..  368285 +    -4  -4.11216   GGTGGAGCTCAAGCT    GCAGCCGGCCGAG CAGGCGTAGCA CTCAGCCGG-TGC    TTTTGCGCATCACCC  59 4
LQF05_RS01635 NONE
        treF  371750 ..  371765 +  -2.4  -3.90744   GTTCTAGGGCATCCA              GCATCG CGAG CGGGGC               TTATTTCCACACGGA  54 34
LQF05_RS01645  373045 ..  373059 +  -3.5  -2.83371   CGGTCAGGCTGAACA               GGATC CCCGC GGTCC               ATTGTTCATCCGCTG  41 462
LQF05_RS01680  380151 ..  380164 +  -3.7  -4.17048   CCACGCTCCAGATCA               CCAGC ATGC GCAGG                TTCTTTTCGCCGCCC  62 468
LQF05_RS01700  382687 ..  382709 +    -9  -4.25104   TCGGACTGTCCATCT           CCGGCGGTCC TGC GAGCCGTCGG           TTTTCATACCGAGGA  79 146
LQF05_RS01705  383917 ..  383954 +  -3.1  -3.57783   CAATGTCGCCGGCCG   CCTGGCGCACGGCTTCG CGTG CGGCCTCCAGCGCCGGG    TTGTCGTTGTCATCG  51 54
LQF05_RS01715  386228 ..  386239 +  -2.2  -3.51708   TCGGACAGCATCAGG                CC-GC GGC GCAGG                TTGGTTTCGGCCATC  47 214
        kdgD  391934 ..  391954 +  -9.6  -4.10161   GCTGATCGAACAGCA            GGGCGCGC AGTAA GCGCGGCC            TTTTCCGACCTCCTG  76 13
LQF05_RS01745  393438 ..  393450 +  -4.8   -2.9039   GGAGTTCTACACCAC                GGTG AAGAC CACC                TATATCGGCTGATGT  45 1
        gudD NONE
        garD  396929 ..  396943 +  -7.8  -3.54459   GGGGCAGCTGGTGAC               GCCGGT CTG ACTGGC               TTTGCCGGCCCTTCC  62 374
LQF05_RS01765 NONE
LQF05_RS01770 NONE
LQF05_RS01775 NONE
LQF05_RS01780  402052 ..  402063 +  -4.4  -2.66481   CCGCGCGTACAGGAG                GCAT GAGC ATGC                 TGCTATCGGCTTTTG  43 20
LQF05_RS01785  402679 ..  402693 +  -7.8  -3.23216   GCCTCGATGCGGTCG               CCGCTG ATG TAGCGG               TTCATGATGGTCAGG  57 321
LQF05_RS01810 NONE
LQF05_RS01815  408210 ..  408261 +  -9.8  -2.91264   TGCCGACCCACAATT CCCTTGG-CGCTTCCCGGGCCGCCC GCA GAACGGCACGGGCGGCGACCTCGGG TGTATGAATCGGCGG  58 340
LQF05_RS01825  409479 ..  409503 +  -6.9  -4.14739   CCGCCGCTGATCGCT          CAGAGCCCGGC TCG GCCGGGCCCGC          TTTTGAACTCCCTCC  71 31
LQF05_RS01830 NONE
LQF05_RS01835 NONE
LQF05_RS01840 NONE
LQF05_RS01845  415960 ..  415973 +  -5.2  -3.86015   TGCAGCTCGCGCACC               GGCG CGTAAT CGCC                TTTCTCCGCCGCCTC  60 172
         fni NONE
LQF05_RS01880 NONE
        crtY NONE
LQF05_RS01890 NONE
LQF05_RS01895  431963 ..  431979 +  -2.1  -3.78934   CCACGCCAGCGAACA              CCACCGC ATA GAGGTCG              TTCTTCTCGAACCAG  53 350
LQF05_RS01910  434503 ..  434519 +  -5.1  -3.31144   GCAGCTCGCGCGGGG              CGAAATC GTG GAATTCG              TTGTAGCCGTCCACC  51 297
        bioB  437220 ..  437235 +  -2.4  -4.16842   GTCGCGTTGGTCCTC              CCGGTG CCTG CTCTGG               TTTCTTCGCAGTGAC  60 63
        bioF  438456 ..  438472 +  -2.2  -2.86271   TTGCCCGAGGAGTGC              GACGAT GCGTG ATCGAC              TGATTCTGCTACCCG  40 14
LQF05_RS01935 NONE
        bioC NONE
        bioD  440690 ..  440706 +  -9.4  -2.92668   CACGAACTAGCGCCT              TGCCGG CGCAA CCGGCA              TCTGCTTGAATGCTG  59 31
LQF05_RS01950  441115 ..  441126 +  -4.4  -3.59979   ACCCCGACAAGTGAT                TGCA ACAA TGCA                 TTTCCAGTAGACCCA  54 143
LQF05_RS01955  443189 ..  443208 +   -15  -6.06723   TTGCTGCTGAAGAAG            GCCGCTGC ATCT GCAGCGGC             TTTTTTTTTGCGCCG 100 45
LQF05_RS01960 NONE
LQF05_RS01965  446844 ..  446859 + -11.8  -5.54907   ATTCAGTCTGCAGAG              CCCCGC TTCG GCGGGG               TTTTTCTTTTCTGCC 100 336
LQF05_RS01980  451077 ..  451105 + -11.6  -5.40072   CGCTCAATAAAAAAA        CGCCGCGGGCTC TCTGT GAGAACGCGGCG        TTTTTTTCGCGCGCA 100 102
        glnE NONE
        ilvE NONE
        waaF NONE
        waaC  462078 ..  462093 +  -3.9  -2.79183   CTGAAAGCCCTGCTG              CGGGC CCCGGA GTCCG               TCTGATGCAACTGGC  41 5
LQF05_RS02015 NONE
        rfaP  464045 ..  464061 +  -3.5  -3.72893   ACTGGATCGTAAGCG              GCGCTAC GGG GATGCGC              TTTGATGGCCGGCTG  54 4
LQF05_RS02025 NONE
LQF05_RS02030 NONE
LQF05_RS02035 NONE
LQF05_RS02040 NONE
LQF05_RS02045  469947 ..  469957 +  -4.6  -3.33696   GCGTTGAAGGCCTCT                 CGCT GCA GGCG                 TTGGTTGCGCCGGCG  49 121
LQF05_RS02050 NONE
LQF05_RS02055 NONE
LQF05_RS02060 NONE
LQF05_RS02065 NONE
LQF05_RS02070  474473 ..  474489 +  -6.5  -3.56568   ATAGCGATGCGCTAT              CGAAGGG AAA CCCTTCC              TTTCGCAGGTACTTA  59 103
        msbA NONE
LQF05_RS02085 NONE
LQF05_RS02090  479280 ..  479290 +  -2.4  -3.27475   CACTGGCCGGATCAG                 CGCG GCC CGCA                 TGTTATGATCGCCGC  44 52
        hldE  480936 ..  480956 +  -7.5  -3.37796   CTGGCCATCACGCAA            CTGCAGCAG CTG CTCCTGCGG            TTGTCCCTGGTGCAG  58 207
        waaA  485716 ..  485739 +  -8.8  -3.30771   TCCGGGTTCAGCGTG          CCGGCCGCCTG CTT CAGGCG-CAGG          TTGTCGAGAATGTAG  60 271
        thiC  489334 ..  489365 + -21.6  -2.78935   ATCGACTACCTGAGC      CAAAGCGGGCCGGC CGAT GCCGGCCCGCTTCG       TATCCTCAGAGATAT 100 54
LQF05_RS02140 NONE
LQF05_RS02145  491417 ..  491442 +  -6.9  -2.99449   TTTTCTGGCCTGGGC         TTGCGTGACCTG CTT CAGGT-GCGCGA         TGTGGTTCTGTGACC  52 58
        cpdA NONE
LQF05_RS02155  493141 ..  493156 +  -3.9  -5.00884   CTGCAGCGGTGGAGC              CCGGC CGGTGC GCTGG               TTTTTTGCAGCCCGT  77 92
        parE NONE
LQF05_RS02165 NONE
LQF05_RS02170 NONE
        parC  498910 ..  498920 +  -2.4  -4.09864   GATAGCGGCCTTTCC                 AGCC TGC GGCG                 TTTTGCCCGGTGCCT  57 83
LQF05_RS02180  499774 ..  499798 + -11.4  -5.26119   AGTACGACTGAAAAA          GCCCGACTGG TGATC CTGGTCGGGC          TTTTCTTTTTGCGGG 100 57
        serB  502862 ..  502888 +  -4.9  -3.14881   GGCGGCGAACGGCGC         GCCCGGCCAGC ACACG GCCGTCAGGGC         TTGATCGCCACCTTC  48 54
        motA NONE
        motB  513784 ..  513820 + -12.9  -2.64735   GAGTCGATCAGCTCG    CCGCCACCGCGGAAGTG GAA CAGTCGCGCGGTGGTGG    TCGTGTGCGTACCCT  67 279
LQF05_RS02240 NONE
         orn  516125 ..  516160 + -12.7  -2.52896   AAAAAGCCTGATGGG    CGTAGCGTCGATG-CG AGAAA CGACATCCACGCTACG    TCGCTTGCAGCGTCC  68 75
LQF05_RS02265  519609 ..  519664 +  -2.4  -3.04144   AGCGCCGCCAGGAGG GCGCATGATGGAATTGC-ACTGGCACG CGG CCTGGCAGGCGCTCATCCATCATCCGC TGTTCGGCGTCGGCA  41 18
LQF05_RS02270 NONE
LQF05_RS02275 NONE
LQF05_RS02285 NONE
        nadD NONE
        rsfS NONE
        rlmH NONE
        mrdA NONE
        rodA NONE
        mltB NONE
LQF05_RS02320 NONE
LQF05_RS02325  531556 ..  531572 +  -3.6  -2.52896   GACCCCGCCGCGGCG              CACGTG CGGAT CACGAG              TCCGTTACGCCATGA  40 64
LQF05_RS02330 NONE
        lipB NONE
        lipA  533526 ..  533555 + -16.4   -5.4505   GTCGTTCCAAGGAAA       GCCGCGCAGGCG TCGAAT CGCCTCCGCGGC        TTTTTTGTTGCCCGC 100 57
LQF05_RS02345  534081 ..  534103 + -16.3  -5.28481   GAACGCAAAAAAAAA           GCCCCGGCA TAACC TGCCGGGGC           TTTTTTCGTTGGCTG 100 67
LQF05_RS02375 NONE
LQF05_RS02380  541825 ..  541835 +  -4.6  -3.71848   AGGGGTCGATCAGCA                 CGGT GAT GCCG                 TTGTTGGTCGCGCGG  58 248
LQF05_RS02435  553407 ..  553436 +  -7.8  -4.09864   CGAACGGCAATCCGC       CGTCCGCGCC GATTGCCTGA GGCGCGGACC        TTTTGGCCGATACCT  71 6
LQF05_RS02440  555277 ..  555289 +  -7.7  -2.63991   CGTCAGGGACGAGGC                TGCTG GCG CAGCA                ATTCCTTGAGTTCGG  52 81
LQF05_RS02455 NONE
         amn  560204 ..  560229 +  -3.8  -2.72144   GCAGCTTCGACGAGC         CGCCGTTCCG CTGATT CGCGCCGGCG          CTTTCGCGGGGATGG  41 12
LQF05_RS02465  560836 ..  560848 + -10.5  -3.64703   AGTGCGAATACCGAG                CCGGC AAT GCCGG                TTTCCATCAGCGGCA  71 328
LQF05_RS02495  565158 ..  565179 +  -4.3  -3.31461   ATAAACGGCAAATGT           GCCATTCGG ATGG CCGAACAGC            TTCTCAGCATCGATA  49 37
LQF05_RS02500  566160 ..  566183 +    -8  -3.14132   ATCGCTGCCCGGGTG          GGCACCACCG CCGC CGCTGGAGCC           TTGATGAGCCCACGC  57 64
LQF05_RS02505  567501 ..  567522 +  -6.5  -3.05384   GCCGAGCAGGCGCCG           CGACAGGTT CAGA GACCAGTCG            TTGAATACCCGCACG  51 185
LQF05_RS02515  568843 ..  568855 +  -4.7  -3.28791   GTGTTCGGCCGCAAT                CGGCG TGC CGCGG                TTGTGCACGGCGAGT  49 221
LQF05_RS02585  586576 ..  586605 +  -8.5  -2.87463   CGCAAAGCGTTCGGA       TCGCGCCG-ACCGG GCG CCGGTGCGGCGAAA       TGTCTCGCCCGAATT  55 397
LQF05_RS02615  590069 ..  590106 + -14.9  -3.11634   ACGCGGCTACAGCGT   CAACTGATGCGCCCAGCT TCG GGC-GGGCGCTTCGGTTG   TTGAATCGTCTGCCC  80 19
        hrpB  592897 ..  592949 +  -3.3  -4.09685   TGCGCCGCAGCATTT CCAGG-GC-CGACAGGTGATTGCTG GTGCG CAGCAGGCGCAGGTCGAGCGCCGGG TTTTCGAGGATCGCG  60 262
LQF05_RS02630  594423 ..  594447 +  -8.4  -2.53271   GAGTTGCTCCATCAG          CGCGGCGTCC CAGTA GGCCGCCTCG          ATCTTGTGACCGTCC  53 69
LQF05_RS02645  596161 ..  596178 +  -4.7  -3.53091   GTGATTTGCTGTTGC             GTGGCTG AGAT CCGCCGC              TTTGAGAAACGGGAT  52 18
LQF05_RS02750 NONE
LQF05_RS02755  622088 ..  622103 +  -4.6  -3.68351   GCAGGGGCTGATCAG              CCCCGA CGAC TAGGGG               TTTGCCTGATAGCGC  54 13
LQF05_RS02760  623956 ..  623969 +  -8.1  -3.09968   GGCGATGGCCTGATC               CAGCC TGAC GGCTG                TGTTGCCCTTGCGTA  56 28
LQF05_RS02765  625616 ..  625632 + -11.5  -4.68384   TGCGGGCATTAAAAA              GCCGGCT TGT GGCCGGC              TTTTCTTCAGTGCCT  95 78
LQF05_RS02780 NONE
LQF05_RS02785  629846 ..  629899 + -12.5  -3.72893   GGCCATCGGCGATCA CCAGCGCCAGGTCGCAGC-CGTCGCCG GCCT CGGCGTCGAGC-GTGGC--GGCGCTGG TTTCGTCGAGGCGTC  80 484
         mpl  636419 ..  636429 +  -2.4  -3.65351   GCGTAGGGTGGAAAT                 CGCC GCA GGCA                 TTTCCATGCGAATGG  49 35
        ubiX NONE
LQF05_RS02825  637359 ..  637378 +  -3.4  -2.90075   GGAGCTGGGCGTCGG            GCTCGGTG TACG CGGCGGGC             TCTGATTGCCGGCAA  42 1
        ftsH  639655 ..  639679 +  -6.5  -3.21395   ACGATCTGGCAATCG         TC-GCAACCG AATACG CGGTTGCCGA          TCTTGTCGCGCAGCT  54 362
LQF05_RS02840 NONE
        tsaE  642438 ..  642455 +  -6.9  -2.94045   ATAACATGGGTTTGG             GGATGCG CATT CGCACCC              TGGTTGTTGGCCTGG  51 41
LQF05_RS02850 NONE
        mutL  645720 ..  645751 + -12.3  -2.71731   CAAGCTGTTCCTGCG     CGGCC-GCTGACCCG GCTC CGGG-CGGCAGGCCG      TGCTTGCGACCTGCC  69 16
        miaA  646778 ..  646788 +  -2.4   -2.7317   CGCTCTCCATATTGA                 GCTG ACA CTGC                 TAATTGACCGTCTAT  39 21
         hfq NONE
        hflX  648495 ..  648513 + -13.8  -3.96542   TCTGTAGCATTGGCG             GGCGCGCC GTG GGCGCGTC             TTTAGCTTTATTTGA  91 78
        hflK NONE
        hflC  650673 ..  650689 + -13.7  -5.14477   TGCTATGATCCGCCA              GCCGGGA AAA TCCCGGC              TTTTTTGCGTCTGTG 100 113
LQF05_RS02885  652057 ..  652092 +  -5.4  -2.88054   TTCGCTGGCGTCCTG   ATGGCTATGGCGCCGC ATGCTC GCGGCGCC--GGCCAG    GTTTCGATTATCGCC  48 25
LQF05_RS02890  653461 ..  653478 + -12.7  -4.39166   CGCGCATGGTAGAAA             GACCGCC TTCG GGCGGTC              TTTTGCTGTCTGGAG 100 44
         rnr NONE
        rlmB  657352 ..  657374 +    -4   -4.9218   GGACCGATCCTTCCG           GTTCGTTCGG AAA CCGACTGACC           TTTTTGTGGTCAATC  77 45
LQF05_RS02915  659751 ..  659764 +  -5.9  -3.85698   CTTGCCTGGATGGCA               GGCGT TTGC GCGCC                TTTCTGCAAGCAAGA  62 112
        rpsF NONE
        rpsR NONE
LQF05_RS02930 NONE
        rplI  661951 ..  661989 + -12.5  -5.13521   GTGCCTGACGAGTAA  CATCGGGCACGTTTCCAC GCGA GTGGAA-CGTGCCCTTTG   TTTTTTCCGTAGTTT 100 61
        dnaB  663422 ..  663444 +  -3.2  -2.81133   ACGACTAGTCGTTCG           CCTCGCTCGG CGT CGGGGCAGGG           TGTCGTCCATGCCTC  41 33
         alr  665107 ..  665127 +  -4.6  -3.62864   GGGCAGTTCGGTCAG            CGGGTCGT GGAAG GCGGCCTG            TTTGAGCTCGATTTC  55 517
LQF05_RS02955  669367 ..  669393 + -13.7  -3.05715   GACCACGGCGAAGCC        GCGG-CCGTGCC CACC GGCGCGGGCCGC         TTCGATCGCCGCATT  76 479
LQF05_RS02970  674125 ..  674135 +  -4.6  -4.07568   CGATCTGCGCTAGGC                 TGGC TTC GCCG                 TTTTCCGGCAGGCCG  64 236
        rluD NONE
        pgeF  680371 ..  680394 +  -3.8  -3.21099   CATCTATGCTCCATC          TCGCGGGTTA TTTG TAAGGCGCGA           TTCATGGTGCCGGCC  45 132
        clpB  683170 ..  683181 +  -2.2  -3.62597   CGTAACGCCAAGGAG                CTGG AATA CTAG                 TTGTTCCGCGATAGC  49 197
LQF05_RS03010 NONE
LQF05_RS03015  683342 ..  683358 +  -5.1  -3.10409   CGAATCCCCCTACCC              CGACC ATTTTTG GGTCG              TTAGCTCAGTTGGTA  46 20
LQF05_RS03020  683441 ..  683498 + -18.8  -3.84246   CCATACAGGCTTGCT CGGCAAGCA-T-GAAAAGCTGGATGTCC ATAC GGGCATCCAGCTTTTTTATTGCCTGCCG TTTAGTGCTTGCCAG 100 38
        nadC  688769 ..  688781 +  -3.4   -4.2558   GGATCAGTGACGGCT                CTTC AGGCC GAAG                TTTTCGTGCAGGGTG  62 78
LQF05_RS03050  689933 ..  689945 +  -3.3  -3.79747   GAGCTGAAGGAACTG                GTCGT CCC GCGGC                TTTGATGCTGCGTGC  54 8
LQF05_RS03055  691475 ..  691502 + -10.4  -3.64703   TAAATTGCCAACCAC        CGAGGGCGCCGC TAAA GTGGCGGCCCCG         TTTCACTACCCAGAC  73 140
        zapE  692706 ..  692746 +  -3.3    -4.323   CGGTCTCCCTGCCAG GCC--GCGCGCTGCAATCGG CAGC CCGCTT-CAGCACGCATGGC TTTTCCGTGTTTGCC  65 113
         nfi  694683 ..  694710 +  -5.4  -2.53263   TGCGCTTGCAGCGGG        TGTCATGCAGGC GCTA GCCTGCTCGCCA         TGCCTTCAGCATGGG  45 77
        ampD NONE
        ampE  696288 ..  696300 +  -9.1  -3.14931   GCTTCGCAGCTCGGG                CGACC GCT GGTCG                TTGGTGAGCCATCAG  61 174
LQF05_RS03085  698626 ..  698653 +  -6.2  -3.53444   CGTTCGCCGGCATGG        CCGGCG-GGTGGA ATG TCCGGCGCGTCGG        TTTCCAGCACGATGG  55 171
LQF05_RS03105  702142 ..  702159 +  -4.1  -3.68351   TCGGCATCGGCCAGT             TCGATGGC GGC GCCA-CGG             TTTGCATAGTCCAGC  53 466
         bfr  708089 ..  708119 + -21.2  -2.52623   GGCCAGCTGATCGCT       GCACCGCGAGGCAG GGC CTGCCTCGCAGTGC       CTCTTCTCAGAGCCG 100 31
LQF05_RS03145  713810 ..  713823 +  -8.1  -2.72344   GGGCGATCAGGGCCT               GCAGC GGCT GCTGC                TGATTGCAGCTGCAC  51 429
LQF05_RS03155  715753 ..  715777 + -11.4  -3.72576   TGCGCCAGGCGGCGG          GCCTGGGCTT CAGTC ATGCCCAGGC          TTTCGTGCAGCGCGA  77 339
LQF05_RS03175  718239 ..  718256 + -14.1   -4.8622   CCTCGTCGATCCGAA             GGGCCGC AGCT GCGGCCC              TTTTTGCTTCAGGCC 100 45
        rutR  725989 ..  726031 + -11.9  -3.05384   GCGCTGATCCTGGAC GGCGTCAGGCCG-CGCTGAG CAGC CGCAGCGCCTACCTGGCGCC TTGCGTGCACGGCCG  68 8
LQF05_RS03230 NONE
LQF05_RS03235  727124 ..  727137 +  -9.5  -3.16881   CGAACGACATGGCTG               CGGCG ACGC CGCCG                TTGCTCAGCTCCATC  60 197
LQF05_RS03255  730769 ..  730779 +  -8.2  -2.66964   GCCGGACTGATGCAT                 GGCG TGC CGCC                 TGGTCTGCTGGCTGG  52 31
LQF05_RS03270  732491 ..  732513 +  -4.6  -4.15565   GCGCGGGTCTACCGT           CACGCCGACG GGG CGGCCGCGGG           TTTTGCCGTCGTCGG  64 156
LQF05_RS03285 NONE
LQF05_RS03290 NONE
LQF05_RS03295 NONE
LQF05_RS03300 NONE
LQF05_RS03305 NONE
LQF05_RS03310  741283 ..  741294 +  -4.4   -3.1876   GTAGCTGCTTGCTCA                TGGA AACC TCCA                 TTAATCGGTCCCCTT  48 424
LQF05_RS03320  743223 ..  743243 +  -3.2  -3.86897   TGCGCCTTCCTCGAC           CTGCGCGGC GGCT GCGGCG-AG            TTTCTCCGGCGTCGG  56 347
LQF05_RS03330  744591 ..  744608 + -14.1  -3.53224   CTCTGAAACGCAAAA             GCCCGGC GAAT GCCGGGC              TTTCGGGCGAGCATC  86 35
LQF05_RS03345  746658 ..  746699 +  -7.9  -2.83715   GCATCAGCACCTCAC CGTTGCGCACCGAGAGC AGGGCATG GCCCTGGGTGCGCAGCA  TCTCGTAGTCGTCCG  52 66
LQF05_RS03360  751033 ..  751059 + -13.7  -5.60993   GGCGTCGGTTGTTTC         GACCCGGGTCG GGCGA TGGCCCGGGTC         TTTTTTTGTGGAGGC 100 92
LQF05_RS03365  751918 ..  751940 +  -6.2  -3.28924   AGAGTTCGAAGAGCT           GCCCCAGG GTCTCGG CCTGGGCC           TTGTCGAAGGCCATC  51 311
LQF05_RS03395  757668 ..  757683 +  -6.2  -3.31461   GGCGCCCTGCTGGCG              GATGAT GGCC ATCATC               TTGTGGCCGTCGATC  53 274
LQF05_RS03415  765650 ..  765685 + -13.2  -3.72576   GCCGCCCACCCCAGA    GCGCTGCGATGAGCCT GATC GGGCTCGTCGCCGGGC     TTTCATGCGCCAGCA  91 69
LQF05_RS03420  767349 ..  767360 +  -3.6  -2.76492   CCGTGGCCTCGGCGG                GTGC ATAG GCGC                 GTTTGCACTGAATCA  40 401
LQF05_RS03430 NONE
LQF05_RS03435  768566 ..  768610 +  -7.2  -2.53876   GGCCGATTCAGTGGC TGCAGTCTCGTTGCGTTCGCCG TAT CGGCG-AC-TAAGGTGGCTGCA TCCATTCCAGTCAGC  48 139
LQF05_RS03440  769941 ..  769970 +   -10  -3.53811   CGGGCCCACCGATCC       TGCGCGGCT-CGC TGGCC GCGCAGCCTCGCA       TTTCCGGGGGCTGAC  70 79
LQF05_RS03445  772344 ..  772365 +  -2.9  -3.24232   ACCCTGAGCCATCGC           CCCGG-CGAG GTG CTCGATCGAG           TGTGTTTGAAGCAGA  43 34
        nosZ  774325 ..  774348 + -12.4  -3.12668   GGCCTGATGCCGGGG          CCGGCCCC GCTGACCA GGGGCCGG           TTCGCTGTACCGGTC  74 34
LQF05_RS03455 NONE
LQF05_RS03460 NONE
LQF05_RS03465 NONE
LQF05_RS03470 NONE
        tatA  778579 ..  778591 +  -4.7  -3.28712   AGCGGTCATCGAGTC                CGGCG CGT CGCGG                TTGTCGCAGCCGGGC  49 289
LQF05_RS03480 NONE
LQF05_RS03485  780661 ..  780697 +  -2.2  -2.70932   GGACTGGGTGGTGGA   CAACGGTTAC-ACCATC AGCT GACGGAGGTGACCGATG    TGGTTCGAAAGCAAG  39 4
LQF05_RS03490  781817 ..  781828 +  -2.2  -3.35073   AGGGCCAGCCGAGCG                GCAT CGAT GTGC                 TTGGTTCAAAATAAT  44 53
LQF05_RS03500  784022 ..  784036 +  -5.6  -3.47227   GCCGCGCGACTGCAT               TCGGGC AGC GCCTGG               TTGTGCTGCTTGCGA  55 348
LQF05_RS03540 NONE
LQF05_RS03545 NONE
LQF05_RS03550 NONE
LQF05_RS03555 NONE
LQF05_RS03560  794475 ..  794487 +  -3.3  -2.68823   CTTCCCGCTGGGAGA                CGTCC GAT GAACG                CTTGTCTCGACGAAC  40 16
LQF05_RS03565 NONE
LQF05_RS03570 NONE
LQF05_RS03575  796069 ..  796087 +    -3   -5.1963   GATCCCCCTGGAAAG             CCTGACTG TTG CGTTCGGG             TTTTTCTTGATTGCC  83 184
LQF05_RS03580 NONE
LQF05_RS03585  798096 ..  798120 +   -10  -4.27584   CGCAATGAGCATCGA         CGGCCCGGCTG GTAA TAGC-GGGCCG          TTTTGCGTTCCAACT  84 48
LQF05_RS03590  800358 ..  800389 +   -10  -3.21912   GGCGTTCCGGGGCGC      CATCGGCGTGCTCC GGCA GGGGCATGCCGCAG       TTGCTGCATTCGGCG  65 385
        norR  804260 ..  804272 + -10.5  -2.85999   CGGCCGGTCGAGGAC                GCCGG TGG CCGGC                TATGGTCTAACCTCA  62 48
LQF05_RS03620  804530 ..  804560 + -16.8  -4.15854   ATCTGAGAGCCCCGC       TCTGCGCCGGCGGC CGT GCGGTCGGCGCGGA       TTTTCCGCTGCATTT 100 35
LQF05_RS03625 NONE
LQF05_RS03630 NONE
LQF05_RS03635  807450 ..  807477 +  -5.4  -3.61398   CGGGCAGCCGTCGAT        GGCCAGGATCGG TCGC CCGGAGTTGGCC         TTCTTCACCAGCGCC  55 363
LQF05_RS03650  810593 ..  810608 +  -8.2  -2.63596   CAAGCAGCAGGCCGA              GGCGGC CCTG GCCGTC               TGATCTGCGATCCCA  52 7
LQF05_RS03655 NONE
LQF05_RS03660  811552 ..  811570 + -11.6  -3.16564   GGTGCTCCCTGCAGC             CCCCGGCC CGG GGCCGGGC             TTGCTGGAGTGAAGA  69 46
        mdtD  816575 ..  816621 +  -2.8  -4.49906   CCGCGTAGCGCTCCC CGCAGACTTGATCGCGATGGC TATTGC GCCACCGCGAACCCG-CTGCA TTTGTTTACCTGTTC  66 90
LQF05_RS03690  817009 ..  817019 +  -5.4    -3.322   TAGTACGAACATATT                 GCTT CGA AAGC                 TTGATGTGTACGGCT  52 51
         edd NONE
LQF05_RS03700  820003 ..  820039 +  -5.6  -3.98173   TGGCGGCGTCAGCTC    GGCTCCTCGTCCGCCG GATAA CGGCTGGCGTTGAGAC    TTTCCTTCACTTTGC  62 156
         zwf NONE
         pgl NONE
LQF05_RS03720  823966 ..  824010 +  -4.8  -3.07816   GCGAGCTGTAATCCG TCCGACCCATCGCGGTGGGC GTGGG GCCTGCCGTGATCGCCCCGA TTCGCTACCTGGAGG  46 30
LQF05_RS03725 NONE
LQF05_RS03730  826629 ..  826644 +  -2.4   -2.7317   CGCTTCACCCATCCA              CCGCGG GCAT CTGCGA               TGGTTCGGCATATCT  39 120
        sugE  827190 ..  827219 +  -9.3  -3.15249   CAAGGGAGCCGTCGC       AGGGTGGATGG CACTTCAC CCATCCACCCG        TTGCTGCCGACTGTG  61 92
LQF05_RS03750  831635 ..  831660 + -18.3  -5.06816   CAAGCGGTAGCGACG         GCCCGCCTCGC CGAT GTGAGGCGGGC          TTTTTGTTGACCGGT 100 44
        malE  836415 ..  836448 + -12.5  -2.83905   TCACCCGTTGAACCC    GT-CGCCGGC-CGCC GCCTCG GGCGCGCCGGCGGAC     TATGCTCCGTTCTCA  70 30
        malF NONE
        malG NONE
        malT  841904 ..  841941 +  -6.2  -3.86015   CCCGGCGCCGCACTG   CACGACGGGGGTC-GCC CATGA GCCTGACCCGCGTCCTG   TTTCTCGCCGCCGTC  62 144
LQF05_RS03785  842612 ..  842631 +   -10  -3.04144   GTGCGTCCAGCAAGG            CCA-GCGCG CCA CGCGCCTGG            TCTTCGCAATGGCGG  62 288
LQF05_RS03795  843767 ..  843787 +  -5.3  -3.04144   TCTACGCCCTCGCTC            GGCAGGC CAGCTAC GCCCGCC            TGTTACGCCTGCGCC  49 58
LQF05_RS03800 NONE
        malK  846754 ..  846803 +  -8.9  -3.05844   GCGAACCGACCCTCG CACCCGTGGCGCCTGCCCGGGCG CTCA CGGCGCGGCGGGAGGCGCGGGCG TATTCGAGTCGAGGA  60 77
LQF05_RS03820  850630 ..  850658 + -11.8  -4.80736   CGCCACAAAGAAAAA       G-CCCCGAGAGTC TTGA GATTCTCGGGGGC        TTTGTTTGTTTGGTG 100 153
LQF05_RS03830  852376 ..  852405 + -20.1  -4.02022   TAAAACTACCACCTG       CGCCATGACCGGC TAAG GCTGGTCATGGCG        TTTATGCTGCTTGGA 100 38
LQF05_RS03835  853729 ..  853740 +  -3.6  -2.52676   TAGCTAAAGCTTGTG                CTGG TGAT CCGG                 TGGGTTGCCAGCGTG  40 89
LQF05_RS03840  856121 ..  856133 +  -9.1  -3.63627   ACCTCGTCAAAGTTG                CGCAG CGC CTGCG                TTTGAGGTCTGAGGG  68 151
LQF05_RS03855  858852 ..  858871 +  -2.8  -3.07443   GTACTCAACATTAGC            TCTGGC CCTAACTT GCCAGG             TTAAATCGAGTGTCG  41 52
LQF05_RS03860  862486 ..  862499 +  -2.3  -3.57561   CCAGGCTGCACTTGA               GCAAC TACC GCTGC                TTTGAAGGCTTCGAG  49 47
LQF05_RS03865 NONE
LQF05_RS03870 NONE
LQF05_RS03875 NONE
LQF05_RS03880  870021 ..  870037 +  -2.1  -3.45571   GAATCTGTCGGGCAG              CTGGGGC TTG GCCTCGA              TTAATATTTGAAGGG  47 5
LQF05_RS03885  873101 ..  873122 +  -5.7  -3.35679   GCGATGGAAATTGCC           CCAGCTCGG TATG CCGAACAGG            TTATAGATAACAACA  53 231
LQF05_RS03925 NONE
LQF05_RS03930 NONE
LQF05_RS03935  881008 ..  881046 +  -2.2  -3.87815   GGGCCGTCTGCGCTC   GATGTAGTCCGCGCGGTT GTA AGCACTGCGGACCTCGTC   TTTGTCGACGTGAGC  55 381
LQF05_RS03980  892516 ..  892543 +  -4.7  -4.27316   AGCACGTAGCTGTCC        ACCAGCTGCGCC TTGCC GGCGC-GCAGGC        TTTTCACTTCCCAGC  68 412
LQF05_RS03990 NONE
LQF05_RS03995  893629 ..  893647 + -13.1  -5.29385   CGCTAGATAGCAAAA             CGCCCGG ACTCG CCGGGCG             TTTTTTCATTCGGTT 100 42
         fur  894686 ..  894702 + -15.1    -5.252   AATAGATGTTGAAAA              GGCGGCC ATG GGCCGCC              TTTTTTATGCCGCTC 100 46
        grpE NONE
        dnaK  899240 ..  899270 + -16.9  -2.87344   CGGGGCGGGCAAGAC      CGCC-ACGCGGGGG CTTG CTCCCGCGTCGGCG       TGTCTGGAAGGCATG  85 81
        dnaJ  900445 ..  900490 +  -5.5  -3.60792   GATGTTTGAGTCGAA CTGAGGGCTTGAGGTCCGGTGC CTGGT GCATCGG-CCTC--GCGCTCGG TTTCCGGCTTGCAGC  57 32
        dapB  901468 ..  901495 + -14.2  -5.07567   TGAATCAAACAAAAA        GCGGGATGACCT TCAC ACGTCATCCCGC         TTTTTTACAATCTGC 100 167
        carA NONE
        carB NONE
        greA NONE
LQF05_RS04050  906832 ..  906860 +  -8.8  -3.55444   GGGCGAGAGCAATGA       CTGACGGCGGCAG ACTG CTGCCGCAG-CGG        TTTCACGCCTGGAAG  66 26
        ftsH  909745 ..  909785 + -15.6  -3.29461   CGGCTGTCAAAAGGC TGTAT-CCAGAAGGGGCGC ATAG GCGCCCCTTCTGGTGTAAA  TTGTCCACCCCGTTG  89 69
        folP NONE
        glmM  912082 ..  912114 +  -8.4  -3.55563   TGAACGCGCTTGCCA     G-GGGCGCAGTCGTT GAGT AACATCTGCGCCCAC      TTTGACCGATGAGGT  62 38
        tpiA NONE
        secG NONE
LQF05_RS04085  913381 ..  913397 + -10.8  -4.52143   GTACCAAACAAGCAG              GCCCGC CTAGT GCGGGC              TTTCTTGTGTTTAAG  89 35
LQF05_RS04090  913554 ..  913569 + -10.4  -5.13741   ACCAGTCGATAAAGA              GCCCCT GTAC AGGGGC               TTTTTATTAGCTTGA 100 37
        rimP NONE
        nusA NONE
        infB  918222 ..  918278 +  -8.7  -3.77484   AGCGTCAATCTGAAA GCTGGGAGCAAGGAGTCGGTGGTCGC CTGGGT GCGGTTACTG-CTTCGAGCTTCCAGC TTTCGGCTTTTAATC  71 44
        rbfA NONE
        truB  919627 ..  919638 +  -7.2  -3.05596   ATGACCGGTACGCAG                CGCG TTCG CGCG                 TTGCGTCAGAGGGTG  52 37
        rpsO  920026 ..  920084 + -19.7  -3.76534   AGCTGGAAGCCGGAA GCTGGAAGCCTGAAGTTGAAAGC-CGGG ACAA CCCGCGCAATCAGCTTCGGTCTTCCAGC TTTCGGCTTTCTTGC 100 51
         pnp  922291 ..  922317 + -17.4  -3.76373   CAACCTAGCAGTCAA         CAGAAAGGGCCC TCT GGGCCCTTTTTG         TTTGCCTGTTCGCCG 100 43
LQF05_RS04130  922950 ..  922966 + -15.1  -5.15969   CCGCGAATCGAAGAA              CCCCGCC ATT GGCGGGG              TTTTTTACGTTAGCC 100 66
LQF05_RS04215  943069 ..  943103 +  -2.7  -2.78596   GCGTAGCTGGCGGCC    CTGATGCGCTTC-GCG CAAC CGCTGGAGCGTGGCCG     TCTGGTCAGGCGCTA  39 22
        sfsA  943821 ..  943833 +  -3.3  -3.83998   AATTCTATCCGGCCG                GGAAC AAA GTGCC                TTTCGTCTGGCCTCA  54 67
        rfbD  944962 ..  945006 +  -4.2  -3.26444   CTTCCGCGCCTGACC CGCTTGGC-GGTA-CTCGGACC GCC GGTGCGATCTCCCTGCCCAGCG TGTATTCTTGCGCCC  48 28
LQF05_RS04230  946168 ..  946195 + -18.4  -5.48054   ACGGGGCTTTAAAAA        GGGCTGCTCGGC GCGT GCCGGGCGGCCC         TTTTTTCGTTTTACT 100 229
LQF05_RS04245  949929 ..  949943 +  -5.6  -3.14211   GTGCTGGCTGCCTGC               CTGGCG TTG CGCGAG               TTCGTCGGCCAGAGT  49 506
LQF05_RS04310  965340 ..  965352 +  -5.5  -3.48738   TCTTTCTGTTCCTGC                TGCTC CGG GAGCG                TGTTTGATGCTGGTC  55 6
LQF05_RS04315 NONE
LQF05_RS04320  967007 ..  967028 +  -4.3  -4.03234   TTGCGAGCAACTGCG           GCAGCGC GGCAAATA GCGCAGC            TTTATCTGCCGCCAG  61 10
        mrcB  973341 ..  973351 +  -3.2  -5.24129   TGGTGCAGCCGACGT                 GCAT TCC GTGC                 TTTTTTGTGAAGAGG  84 41
LQF05_RS04350 NONE
LQF05_RS04355  974799 ..  974824 +  -8.3  -3.87815   GGCTGAGCGCCAAAA         TGCGT-GACGCC CTG GGCGTCTACCCA         TTTGTACACCTGGGC  69 396
LQF05_RS04365  977027 ..  977044 +  -2.1  -3.69323   AAGACGGAGCGGACC             TGATCATG AGA CAT-ATCA             TTTCCCTGCTGATGG  49 23
        ilvN NONE
        ilvC  978638 ..  978653 + -11.8  -5.32944   TTCTGCTCAAGAAAA              CGCGGC TTCG GCCGCG               TTTTTTCGTTCTGCA 100 47
        pssA  979594 ..  979627 +  -3.7  -2.51256   ACTGCGTCGGCGCAA     GCGCGTCGAGGGTTGA TTT TCC-CCCTGGCTGCGC     GTATTGCTCGTCTGT  40 10
        msrP NONE
        msrQ  981756 ..  981781 +  -3.2  -3.57406   TATCAGCATCACAAA         GCAACACTCG TTTATT CGAGAGTTAC          TCTTTCTAGTAAAGA  51 487
LQF05_RS04395 NONE
LQF05_RS04400 NONE
LQF05_RS04405  983812 ..  983832 +  -2.6  -4.09243   CGCGTCAAGGTAAAA            TTTGCGTG TTCTC TATGCAAA            TTTTCGGCGAATGTC  57 201
LQF05_RS04410  986788 ..  986802 +  -2.8  -3.03243   CTTGACCATATAACA               CCCAAA CAA TTTGGC               TGTTAGACGGTAAGT  41 32
         rrf  987039 ..  987076 + -16.3  -4.07568   CGTCAAGCTCCTACA   CCAAACCCCCGATCCGC GTAA GCAGGTCGGGGGTTTGC    TTTTGGGGCGCGGAA 100 33
LQF05_RS04420 NONE
LQF05_RS04425 NONE
LQF05_RS04430  990942 ..  990957 + -11.8   -4.8622   CGCACATATGAAAAA              GGGCCC CATG GGGCCC               TTTTTCGTTGCGGGA 100 100
LQF05_RS04450 NONE
LQF05_RS04455  998488 ..  998525 + -18.5  -3.85698   GAGCTGCACGTGAGA   ACGAAAGGCCCCGCTGC TCTG GTAGCGGGGCCTTTTGC    TTTGTCGGCGGCGCG 100 50
LQF05_RS04460 NONE
LQF05_RS04465 NONE
        rimI 1001606 .. 1001627 + -13.7  -3.16039   GGTGCGTTGTTCCAT           GG-GGCGGGC TCA GCCCGCCGCC           TTACTAGGCATCGTT  78 42
        otsB NONE
        otsA 1004641 .. 1004651 +  -8.2  -3.29144   GTCGAACCCGAGTGA                 GCCG CGG CGGC                 TTGTCAAAAGCCTGC  59 26
         can NONE
LQF05_RS04495 1006229 .. 1006240 +  -7.2  -3.35813   CGCTGGCCTGCTGCT                GGCC ACGC GGCC                 TTCGTTCCGCTAGGG  56 1
LQF05_RS04500 1006529 .. 1006550 + -12.3  -5.72622   CACCAGACAAAACAA           GGGGTTAGC GAAA GCTAGCCCC            TTTTTTGTTTGTGCC 100 36
LQF05_RS04505 1007049 .. 1007072 + -10.2  -5.32565   CGCTAGACAACCAAA          GGCGCCTGGC CAAG GCTAGCCGCC           TTTTTTCGTTCCTTC 100 183
LQF05_RS04510 1007422 .. 1007450 +  -7.9  -5.23292   CGGCGCAGAATCGCG        CCATTTGGCGGGG CGA CCCCGCCTGCAGG        TTTTCTTTTGTGTAG 100 120
LQF05_RS04515 1007669 .. 1007686 + -10.5  -4.72272   TGAAGCGTGAAAACA             GGCGGCC CGAG GGTCGCC              TTTTTCATGCCCGGA  89 55
LQF05_RS04600 1028442 .. 1028456 +  -4.2  -3.43217   ACTTTCGCCTACTCC               GCGACA TGT TGTCAC               TTGGTTACCTTTACG  52 186
LQF05_RS04605 1030248 .. 1030275 +  -8.2  -3.09516   GAACAGCACTGACCG        GCACCGGCCGGG TTCG CCCGGCCGGCCA         TTCGCTCATCCGAAA  56 29
LQF05_RS04610 NONE
LQF05_RS04615 1032320 .. 1032340 +  -9.6  -4.64598   CTCCTCGTTGGAATT            TCCGGGCC GCACA GGCCCGGC            TTTTTCGCGTGATTA  85 60
LQF05_RS04620 NONE
LQF05_RS04625 NONE
LQF05_RS04630 1035422 .. 1035438 +  -3.5  -3.55122   CACCCGGTCGGCGGC              GGCCGGG TGC CACGGAC              TTCCTTTGGGTGGTG  49 59
LQF05_RS04635 NONE
LQF05_RS04640 NONE
LQF05_RS04645 1038114 .. 1038130 +  -2.1  -3.72027   ATCTTGTTGCAGACC              GGCACGA CGA TGGCGCC              TTCTTCCTCGGCGAT  53 481
        hemA NONE
        prfA 1047204 .. 1047218 +  -9.2  -3.53444   TGGGCGACTGATCCT               TGCCGC CTT GCGGCG               TTTCCACGAGCATCC  66 30
        prmC NONE
LQF05_RS04710 NONE
        murI 1049637 .. 1049649 +  -4.7  -3.98826   CCCGGTAGGAACTCC                CGCCG CGG CGGAG                TTTCTCAATTGATGC  59 33
LQF05_RS04720 1050646 .. 1050669 + -19.6  -4.43877   AGGCGGGAAAGGGGG          CGGCCCCAGC GGAC GCTGGGGCCG           TTTGTTTCAGACTTC 100 440
LQF05_RS04740 1053481 .. 1053497 +  -5.7  -5.41941   TTACAGGCTCACCAC              GCTGGCG TAG TGCCTGC              TTTTTGTTTCGTTTC  91 114
LQF05_RS04745 1055720 .. 1055738 +  -3.9  -3.28712   CCGCGACTTCCTCGC            GTTCAGCG TGGG CG-TGAAC             TTCTAAGGAGACCAG  47 1
LQF05_RS04750 1057234 .. 1057252 + -13.8  -6.23209   TTGGCTTGTGAATAA             GGCGGCCG GAT TGGCCGCC             TTTTTTTTTGCTTCC 100 52
LQF05_RS04755 1060150 .. 1060172 +  -2.7  -4.17048   GGATACGTTGATCGG           CAGCGGGAA GAGAG TTCTTGTTG           TTGTTTTGAGGACGA  60 95
        secA 1065025 .. 1065054 + -20.7  -4.84359   TGTCCCGTTGATCCA       CGCCGCGACCGGC CTGT GCCGCTCGCGGCG        TTTTTCTCCCCGTCA 100 50
        argJ 1066341 .. 1066382 + -20.3  -2.57881   ATCGTCTCGCCCCTC GCTATTCCCGTTGCGCATG GGCC CATGTGCAGCGGGAATTGC  CTTCTCCACGCGTTG  95 40
LQF05_RS04790 NONE
LQF05_RS04795 1068065 .. 1068076 +    -3  -3.21099   CTGAAAGACTGCAAC                TGAA ATGT TTCA                 TTGATAGTGAAAAGC  43 77
        ahpC 1068817 .. 1068841 +   -15   -4.9448   GCTCCTTCGACCCGA          CGCCTGGACG CGAAC CGTCCGGGCG          TTTTATTTCCTGAAT 100 82
        ahpF 1070462 .. 1070487 + -19.1   -4.7254   CTCGGCAAACAAAAA         GGGGAGCAACC CTCA GGTTGCTCCCC          TTTTTCGTGGGCGAT 100 46
LQF05_RS04810 NONE
LQF05_RS04815 1072948 .. 1072975 +  -8.4   -3.5594   CTGACGTAGCCTTCG        ATGGC-GCCGCGA TTG TCGCGGTAGCCAG        TTTCCAGCATGCCTT  65 399
LQF05_RS04845 1078831 .. 1078857 + -13.1  -2.71144   AACCCCCCGCTTTCC        TCGGTGTCC-CG GCTG CGCGGACACCGA         TCCTTCGAAGGAGTA  69 68
LQF05_RS04850 1079722 .. 1079745 + -18.2  -3.09831   CCTTTGCAAACGAAG          CGAAGCCGGC ATCT GCCGGCTTCG           TCGTTTTCAGCTGCG  89 45
LQF05_RS04865 1083024 .. 1083041 + -12.7  -5.27938   CGTCTATAGAAAGAA             GGCAGCC CGAT GGCTGCC              TTTTTGTTTGCAGGT 100 59
LQF05_RS04875 1084623 .. 1084638 +  -4.7  -3.17075   TGGCGATGGCGCGGC              GCTGA CGCGGT TCAGC               TTGGCTTCAGCGGCG  48 21
        fxsA 1085235 .. 1085256 + -15.9  -4.98531   CGCTCGCGCGATAAC           CGGCATGCC AGCA GGCATGCCG            TTTTTCATTTGCGGC 100 43
LQF05_RS04885 NONE
        groL 1087479 .. 1087495 + -10.8  -5.81412   GCTCCATAAAAAGAA              CCCCGC CTCGT GCGGGG              TTTTTTTTGCGTGCC 100 57
LQF05_RS04895 1088057 .. 1088078 +  -7.9  -3.62522   TGGTCATCAGCACCG           GCCGCAGGCG AAT CGCC-GCCGC           TTCTTCCACCGCTTC  63 255
LQF05_RS04935 NONE
LQF05_RS04940 1101043 .. 1101055 + -10.5  -2.58544   TGCGCTTCTGCGTCA                GGCCC TCG GGGCC                GTTGTCGACATCCAG  58 258
LQF05_RS04965 1106979 .. 1107029 + -10.3   -3.6502   CGTGCAGACTGTCGA GCCATCGCCGAACCAGTC-CCGGC AGCT GTCGGCGACCGATCCGGTGCTGGC TTTCACTGCACCGTG  73 473
LQF05_RS04975 1108088 .. 1108116 + -19.6  -3.74345   GAGTTCACCTCGCTC       GGCCGCCG-CGCG CATT CGCGGCGGCGGCC        TTTGAGTGTCTCCCT 100 39
LQF05_RS04985 1111679 .. 1111697 +  -5.2  -3.14229   ATCTTTGCCACCGGC             TGGCCGTT GCA GGCGGTCA             TCTTGATCACCATGT  47 154
LQF05_RS05010 1115923 .. 1115937 +    -7  -3.07113   TACCCAGCAGCCAGG               CGTCGC GCA GCGTCG               TTGCGTCGGGTGCTG  51 416
LQF05_RS05045 1124540 .. 1124552 +  -4.1  -3.62597   TGAGTGATTTCCAGG                TGTCA CCC TGACG                TTGTTCCAAGGTGAC  53 282
LQF05_RS05060 NONE
LQF05_RS05065 NONE
         xth 1128397 .. 1128421 + -10.6  -3.65991   GCGCAGCGGTTGTGG          CCGGCCGGTC GTCAG GGCCGGCGGG          TTATGTTGCAGGCGT  73 105
LQF05_RS05075 1129751 .. 1129764 +  -3.1  -3.96148   CTTGCGCCTTCGGGC               GGTTT CGCT GAACC                TTTATGGTGCGCGGG  56 69
LQF05_RS05080 1130322 .. 1130339 + -12.7  -5.24129   CCCGTCTGCACGAAA             CGCCAGC ACTT GCTGGCG              TTTTTTATGCCCGCA 100 51
LQF05_RS05105 1137420 .. 1137439 + -16.4  -5.24129   CCGCCGAAATGAAAA            GGGGCGCC TCTC GGCGCCCC             TTTTTTCTGCCCGAC 100 50
        uraH 1148353 .. 1148371 + -13.8   -5.1356   TCTGGAGTCCCTTTT             GCCCGCCG TAA TGGCGGGC             TTTTTATTGGTGAGA 100 67
LQF05_RS05170 1151873 .. 1151885 +  -4.9  -4.21737   TGCCTGCTGGTAAAT                GTTAT GTT ATAAC                TTTCATTGTTTTGGT  65 197
LQF05_RS05175 NONE
LQF05_RS05180 NONE
LQF05_RS05185 1154472 .. 1154497 +  -5.4  -3.40403   TCGTCGCCTGGCTCA         GGCGATAGTCG ATCAG CGGC-GTCGCC         TTGTAGTCGAGCACC  51 138
LQF05_RS05230 1168497 .. 1168521 +  -7.8  -2.91274   GTCTTGCTGTACCAC          TGCTTCTGCG ACAGG CGCGGCAGCA          TCTGCTTCACGTCCA  52 243
LQF05_RS05240 1170222 .. 1170237 +  -2.5  -2.60496   GCTCGCCCGAGCGGA              GCGTC TAAGCT GATGC               ATCTTTCCACAACGA  38 64
LQF05_RS05245 1171519 .. 1171533 +  -2.8  -3.57561   AGGGGTGTCGTAGAC               CACC TTGATGC GGTG               TTTCAGCGGTTGCGC  51 305
LQF05_RS05265 1175045 .. 1175058 +  -3.8  -2.73797   CGAGTAGACTGGCTG               CCCT CTCAAC AGGG                TACGTTTCTATGACT  41 104
LQF05_RS05270 NONE
LQF05_RS05275 1176404 .. 1176422 + -13.8   -4.0075   GGGCACCTGCTGAGC             CTGGCGGC CGT GCCGCCGG             TTTCCTTCGTTCGAT  95 28
LQF05_RS05280 1177004 .. 1177014 +  -2.4  -4.77567   GAGAAAAGTCCAGGT                 GACG AAG CGAC                 TTTTCTTCTGCCCCT  74 121
        lptF NONE
        lptG 1191216 .. 1191232 + -10.1   -2.5474   GCGCCTGCCACAGAT              CGATGGC GCG GCCGTCG              CTGTTCTGGATGCGG  58 269
        queA NONE
         tgt NONE
        yajC 1195024 .. 1195049 +   -14  -3.33815   GACTTCATTCAACAC         CGACGGGGCGC GCAAG GCGCCCCG-CG         TTCATTAAACGGGCT  81 44
        secD NONE
        secF NONE
LQF05_RS05380 1198497 .. 1198512 + -11.8  -5.30616   AGCTGCATAAAAAAA              CGCCCC TGTT GGGGCG               TTTTTCTTTGCGTCA 100 49
        trmJ NONE
        cysE 1201132 .. 1201152 +  -6.9  -3.52652   GGGTGTCTCACTAAA            GACCTACTA ATT TAATAGGTC            TTATAGTTGACTCAA  58 103
        iscR NONE
LQF05_RS05405 NONE
        iscU 1203381 .. 1203392 +  -2.2  -2.65774   GAAAAGAAAGGTCTG                CTCT GACA GGAG                 ATTGTGATGGCTATC  38 20
        iscA NONE
        hscB NONE
        hscA NONE
         fdx NONE
        iscX 1206808 .. 1206826 + -10.2  -3.85362   TGTTTTTAATGCCAA             CCCGCGTA TAA TCCGCGGG             TTTACTCGTTCGCTT  78 124
         ndk 1207279 .. 1207290 +  -2.2  -3.07816   TTGCTGCCACCGAAG                TGTG CGCA CGCA                 TTCGCTGAGTGAGCG  41 6
        rlmN NONE
        pilW NONE
LQF05_RS05455 NONE
        ispG 1211334 .. 1211354 +  -2.3  -2.84504   AAGCTTGCGTCCGAC            GCGGCGGTC ATC GCGCGCAGC            TGATCTTTAAGGAAT  40 2
        hisS NONE
LQF05_RS05470 NONE
        bamB 1214531 .. 1214551 + -18.3  -3.57825   GAGCCATGAATATTC            GGCCGCTGC CCT GCAGCGGCC            TTCGTGTTTTCTGAA 100 72
         der 1216175 .. 1216227 + -10.6  -3.54424   TCGGTGATGCCTCAG CTGTCGCCGTCGAACGACTGGTCC ATGTCCA GGGCCGGTCGTGCG-TGGCG-CGG TTTGCCGACCTGGCG  70 114
LQF05_RS05490 NONE
LQF05_RS05495 1219423 .. 1219436 +  -3.8  -2.70932   GCAATGCCCGCACGG               GCGT AGAGCC ACGC                TCGTTCCAGGCCGCG  42 393
LQF05_RS05535 1225709 .. 1225740 +  -8.6  -3.18023   CCTCGATATAGGCAG      CGGCCTTGGCGTTG CTGC CAGCGCCGATGGCG       TGTTCATGGTAGTCC  59 290
LQF05_RS05545 1227942 .. 1227954 + -10.5  -3.06796   AGCTGACGTCATCGA                CCGCC CTT GGCGG                TTCAATCACCTGCAG  64 35
LQF05_RS05550 1230363 .. 1230383 +  -5.3  -3.91897   AGCCGGTTCGATCGG            CACCTGCGT CGA ACGGAGGCG            TTTGTGCCTCGGGCA  62 210
LQF05_RS05575 1235339 .. 1235366 +    -4  -4.58395   GCATTGAGCGCAAGG        GGGTGCGTGG GTATAATG CCGCGCTTCC         TTTTTCCCGCCTGGG  70 99
        guaB 1236888 .. 1236936 + -14.8  -3.71917   TGACAGGCGCTGGAA GCTGGAAGGTGGAGACCGGAT ATTGCACG ATCCGGTCTGCGC-TTCCAGC TTTCGGCTTTCAGCT  93 52
        guaA 1238569 .. 1238592 + -16.8  -2.62263   AATGATCTGAAGCAA          TGAGGGCAGC CCAG GCTGCCCTCA           TGCTATGCGCAGCCT  83 36
LQF05_RS05590 NONE
        tadA 1240542 .. 1240566 +  -9.2  -3.72576   CGGCAGAAGGGTTAG         CGC-GCCGCCG TTGT CGGCTGCAGCG          TTTCGTGGGCGGCAA  71 26
        grxD 1243186 .. 1243207 + -15.9  -5.75342   AGCGCGCCAGTGAAT           GCCCGCATC CATG GATGCGGGC            TTTTTTTTGGGGGGC 100 58
LQF05_RS05615 1243948 .. 1243982 + -12.1  -2.73364   CCCTCCAGCAGTGCG    CCGGGGGC-CGGACGCG AGG TGCG-CCGTGGCCCCGG    TGCTTCGGCTCAGAG  69 265
        uvrB 1247522 .. 1247542 +    -9  -2.87931   CCTCCCGAGTCCCCA           GGCCTGCTC CTGC GAGC-GGCC            TGTATGAGGCGTGCC  59 46
        gltX 1249171 .. 1249199 +  -5.7  -3.14931   GGCGGTGCCGACGTT        CGGCGCCGCCGCG TTG CGGGGCAGGACCG        TTGGTCGGCGGTAAG  50 55
LQF05_RS05640 1249438 .. 1249459 +  -3.7  -2.79796   GATACAGGTTGCGCT           TGAAGGG TTTGCGTC CCCTTCG            TCTAGTGGCCTAGGA  41 79
LQF05_RS05645 1249516 .. 1249526 +  -2.4  -3.06315   GGTTCGAGTCCCCTA                 GGGG ACG CCAC                 TATTCGCGATGTTCG  41 16
LQF05_RS05650 1249677 .. 1249696 +    -5  -2.79796   AGATTTCGGGATCGT            CGAAGG TTTCGTCC CCTTCG             TCTAGTGGCCTAGGA  43 58
LQF05_RS05655 1249790 .. 1249813 +  -9.6  -5.54907   GTTTTGGGCATCAAG          GGGTCATCTT TCAT GAGATGGCCC           TTTTTGTTTTGTGCG 100 53
LQF05_RS05660 1250440 .. 1250457 + -10.5  -4.12188   TGCTCGGGCTTCATC             GCGTCGC TCTC GCGGCGC              TTTTCCGCATCCTCG  80 61
        dinB 1251975 .. 1251992 +  -4.1  -3.89614   TGCGCGCGTTGTTTG             GCGTC CCATGATT GACGC              TTTCTGGCGCTTCGA  56 172
LQF05_RS05675 NONE
LQF05_RS05680 NONE
        gspM 1254409 .. 1254419 +  -8.2  -3.14931   TCGATCCTACCCGTC                 CGCC CGC GGCG                 TTCGTGACCGCTGCA  57 94
LQF05_RS05690 NONE
        mshL NONE
LQF05_RS05700 NONE
LQF05_RS05705 NONE
LQF05_RS05710 1260302 .. 1260328 + -10.1  -3.33969   GTCTCCTGCCCGTCG        CGGCCGTAGGCG CGAG CGCC-ACGGACG         TTGTCCGCTCGCTTG  68 50
LQF05_RS05715 1261630 .. 1261648 +  -2.4  -3.38584   TAGGTAGCAACCATA            T-GCCGC TAAGTC GCGGCCA             TTGGTTAAGTCATAT  44 58
LQF05_RS05720 NONE
LQF05_RS05725 1262740 .. 1262750 +  -5.4  -4.64464   TGCCGAATGGCTGGA                 GCTT TCC AAGC                 TTTTGCTTTGCTTTC  76 69
LQF05_RS05730 NONE
LQF05_RS05735 NONE
LQF05_RS05740 NONE
LQF05_RS05745 NONE
LQF05_RS05750 1269664 .. 1269691 + -15.6  -3.54638   TCGGTGCCTGAAAGC        GGTGCGCAGACG CCTT CGTCTGCGCACA         TTTGGCGCGGCTTAT  93 303
LQF05_RS05795 1277432 .. 1277483 +   -20  -3.29144   GTAGCAGAACGCGGC GACCCGGCCGCTGCCGGCCAGGCGC AGG GCGTC-GGCGGGCTGCGGCGGGGTG TTCTCCAGCGCCTCG 100 314
LQF05_RS05820 NONE
LQF05_RS05830 1282921 .. 1282966 +  -3.1  -3.02144   AACTCTGGTGCAGAT GTACCGGGAGGGCGACCAGTGA AGA TCGC-GGCCAACCTCTCGCTGC TGTTCACCGAGCTGC  43 4
LQF05_RS05835 1283788 .. 1283800 +  -2.6  -2.62184   GACTCTAGAGTCATG                GTCG AGTCC CGGC                TGGTCTGCGGCCGGA  38 92
LQF05_RS05840 1285213 .. 1285237 + -12.2  -6.07627   GCGTCATGGGGTTTG         TGCCCGGACCA GTGA TGG-CCGGGCA          TTTTTTTTTGCGGGT 100 50
LQF05_RS05845 1286696 .. 1286714 +  -4.5  -3.14211   GCGGGTCCCATTAAC             GGTGCTC AAGCG GAGCGTC             TTCATGGAGAGCAAT  48 108
LQF05_RS05850 1287734 .. 1287747 +  -4.5  -4.13767   CGCGTATCGCTTCCA               GG-CGC AGG GCGGCC               TTTTCCAGTGCCGCC  62 118
LQF05_RS05860 NONE
LQF05_RS05865 NONE
LQF05_RS05870 1292181 .. 1292197 + -13.7  -5.75342   CACGCAAGGCATTTA              GGCGACC TAT GGTCGCC              TTTTTTTTGCGCGCG 100 430
       fadD2 1298044 .. 1298069 + -11.9  -4.03234   CAGACAAGGAAGGAA         GTGACCGGGAT ATTT GTTCCGGTCAC          TTTATGTCGAAAGCC  84 64
       fadD1 1299942 .. 1299957 + -11.8  -5.42514   AGCGCCTACAAGAAA              CCCCGC CTCG GCGGGG               TTTTTTCGTTTGTGC 100 47
LQF05_RS05895 1301817 .. 1301841 + -18.7   -3.6422   TAGGACGGGCCTTAG          CGAAACCCTGC CTG GCAGGGTTTCG          TCTTTTCCGGGGGTC 100 61
LQF05_RS05900 1303699 .. 1303718 +  -7.8  -3.92324   CTGTCGCCAAGGCGC            GGCATTCG TTGC CGAACGCC             TTTGATCTTCAGCGA  69 69
LQF05_RS05905 1305510 .. 1305543 +  -7.9  -4.26903   GATCCGTTGATCGCC     TGAATACCGCGCCGG TTCG CCGGCGCGGTCCCCC      TTTTCCTACGGTCGG  75 31
        hrpA 1309671 .. 1309699 +    -3  -2.90573   TGAACAAGCAATGGA        GCCAGGTCGAGC CCTGA GTTCGGGGTGGC        CTTTCATCTGGATCG  40 9
        rarD 1310677 .. 1310687 +  -4.6  -3.53224   CACAGGGCGGAAAAG                 CTGC GTA GCGG                 TTTGCACAGGGCCTG  52 90
        rlmE 1317746 .. 1317759 +  -5.3  -3.60971   ATCGGGCGCAGAAAA               GATTG TATA CAATC                TTTGACCATTCACAT  57 350
LQF05_RS05950 1319120 .. 1319141 +  -3.6  -3.02043   CCAGGCCCTGGCCTG           GCGGATGC CTGAGA GCGTGCGC            TGTTCGACGAAGGTT  42 452
LQF05_RS05975 1324259 .. 1324269 +  -2.4  -3.14931   CCACCCAGGGCTGCT                 CGCC GTA GCCG                 TTGATCAGGCGTAGC  42 515
LQF05_RS06015 1330282 .. 1330295 +  -5.2  -3.16564   CAAAGTACAATTCGT               GCCC GCCGGG GGGC                TTCGTACCCTGCGGG  48 104
LQF05_RS06020 NONE
LQF05_RS06025 NONE
LQF05_RS06030 1332813 .. 1332850 +  -4.7  -3.56643   GTACTGCAGGTCCTT   GCCGACGCTCTGTTCCAG CTG CTCGACCAGTTCG-CGGC   TTTCCCAGCTCTCCA  55 124
LQF05_RS06050 NONE
LQF05_RS06055 1337389 .. 1337399 +  -2.4  -3.41229   GCCTTCCTAATCCAG                 GCAG GCA CCGC                 TTCTCATGGAACTCT  44 95
LQF05_RS06060 1338327 .. 1338356 +  -6.3  -3.07895   GTCGCAGCGGCTCGC       TGGTCGCCCCGTGC GGA GC-CGGGGCCAGCG       TCTGTTGCAGCTGGG  49 360
LQF05_RS06070 1339373 .. 1339389 +  -8.7  -3.18681   CATTGCGGTCGCGCC              GTAGCCC GCA GGGTTAC              TTGATCACCTTGCGC  61 22
LQF05_RS06080 NONE
LQF05_RS06085 1343037 .. 1343073 +    -3   -3.8211   CAGCAACGCCTGCAG   TGCCCTG-GCGTAGGCGC TGG GTGC-TACGCGCAGGCTG   TTGTTGTGCGTGGCG  56 133
LQF05_RS06100 1347654 .. 1347667 +  -8.1  -2.75481   ACCGGCGAGCTGCAA               CGGCA CCGG TGCCG                TCATTGCGGTTCAGA  53 40
LQF05_RS06110 NONE
LQF05_RS06115 1351319 .. 1351335 +  -7.9  -4.44667   GCGCCGCTCCCTCTG              CGTGGCG TGG CGCTGCG              TTTCTTCTTCCACGG  78 154
LQF05_RS06125 1353858 .. 1353879 +  -2.9  -3.01924   GGTGGACGCGATCAT           CGCGGTG AAGAACAC CACCGCC            TGTTGCGCCAGGCTC  42 264
LQF05_RS06135 NONE
LQF05_RS06140 1356233 .. 1356246 +  -4.5  -3.16742   CCTGTGTGTCTGGCG               GCGGA GGGT TTCGC                TTGATGGCGGTTGCC  48 59
LQF05_RS06160 1361284 .. 1361302 + -10.3  -2.74012   AAAGCCGGCCGTCAC             GGTGGTC AGGTA GACCACC             TCCTTCAGCTCCTCA  59 102
LQF05_RS06215 1370925 .. 1370947 +  -9.8  -3.82946   GAGTCCTAGCCGCAC           GGCAGCGGAG CGG TTCCGATGCC           TTCTGTTTCGGCTCA  76 151
LQF05_RS06220 1371576 .. 1371600 +  -9.2  -3.29144   CAGGGCGGTCTGCGT          GGTTTCCGCG TCCGC CGCGGCGACC          TTGTCGGCGGCATAA  63 126
LQF05_RS06230 NONE
         glf 1375414 .. 1375426 +  -3.3  -3.33696   AGCCAGCCGCAGGCG                GTCGC CGG GCAAC                TTGGTTGAAGCGCAA  47 5
LQF05_RS06240 1376668 .. 1376679 +  -2.2  -2.78384   ATCCGGCCCCGCAAC                TCGC CGCA GTGA                 TGTCATGAACCAGGC  39 6
LQF05_RS06245 NONE
LQF05_RS06250 1379170 .. 1379214 +  -9.2  -3.29324   CTGCTCGGGTACACG TGCCGAACGCGGCAGCAGCAT GATC ACGCTGGTGCCGCGCCCG-CA TTCGCTTTCGATCCA  62 494
LQF05_RS06265 NONE
LQF05_RS06270 1384471 .. 1384484 +  -3.7  -3.04144   GGGCCAGGCAGTCGA               GGCGG GTCG CGGCC                TGTTCGGCGTAGCCG  44 133
LQF05_RS06280 1387475 .. 1387491 +  -3.5  -3.61178   GGCTGGCGGCTTCGA              GCGGACC GTA GGGGCGC              TTTCCGGTCGCTCAG  51 15
LQF05_RS06285 NONE
LQF05_RS06290 1388559 .. 1388572 +  -5.2  -4.03234   CCATACTGATAGCGG               GCCG TTGGAT CGGC                TTTGTCTGAAACGCA  61 3
LQF05_RS06300 NONE
LQF05_RS06305 1390910 .. 1390952 +  -9.1  -3.31263   ATCATGTGAGGAGGT GGCCAGCTGG-CCTTGCG GCGGTACA CGCAAGGTCCGGCCGTCC TTCTCGAACTCGAAT  64 270
LQF05_RS06315 1392787 .. 1392810 + -11.7  -3.29216   TACCCCTGAATCCAC          GGGCGCG-GC CTTGC GCTCGCGCCC          TGTTCTCACTTCATT  72 32
LQF05_RS06320 1394326 .. 1394340 + -12.8  -3.14564   GGCGACCGGCTTTTC               GCGCGG CCG CCGCGC               TTCATGCGCCGGTCA  74 184
LQF05_RS06375 1407742 .. 1407791 +  -8.5  -3.18582   AACGGGTAGGGCTGA TGCACCAGGGCCTTGATGTTCGC TTCG GCGGGCATCAGGTCCTTGAGGTA TTCGTAGGTCGCATC  59 117
LQF05_RS06385 1410420 .. 1410454 +  -4.1  -2.76242   GTTCTGACGCCGCTG     CCGTGCGGCGGCC AAGCGGTAC GGCGGCATCACGG     TCGTCTATGTTGGAT  41 34
         ggt 1412476 .. 1412496 +  -8.2  -3.78124   CTTGAAGCCAATGGT            GCCGCCGT TGGCC GCGGTGGC            TTGTTCGTCGTTGAT  67 303
LQF05_RS06405 1415456 .. 1415482 +  -2.8  -4.09685   GGCTCGATGGTGAAG         GTGCGTGCCG AGTCCAC CGGCCCGAGC         TTTTCCAGGGTGCGC  60 82
LQF05_RS06460 1424256 .. 1424270 +  -2.1  -2.74144   CACGGCCCGGTACGG               TTCTC AACAG GGGAA               GTTTGCCGATCGGCA  39 49
LQF05_RS06465 1424785 .. 1424813 +  -7.3  -3.36968   GGCCGCTGCGCCGAC        CATCGGCGGGA ATGATCG TCCCGCCGCGG        TTGTCAGCTTAGCTA  56 49
LQF05_RS06470 1425864 .. 1425893 +  -2.9  -3.57144   CTTGGGCGCGGCGCT       GACACCTTC AAGGGTGGCAAA GGAGGTGTC        TTTGGCCGTCAGCAG  49 59
        metE 1430367 .. 1430381 +    -7  -3.14564   GATCATCGAAGTGTT               CGCCGC CGG GCAGCG               TTGCTCCGCGGGTCC  51 404
        ybaK 1432582 .. 1432611 +  -3.5  -3.33583   GGCATGAAACACATG       CTCGGCGAACGCCA GCG TGGCG-TCATCCAG       TTCTGCGGGTCTTGT  47 507
LQF05_RS06505 1433079 .. 1433089 +  -3.2  -3.38786   GGCGTTAGCCTCGCC                 TTCG GGC CGGA                 TTACTGTTCGGTCTC  47 33
LQF05_RS06515 NONE
LQF05_RS06520 1435475 .. 1435496 + -17.3  -3.36273   ACGCTGTGAACAGAA           GAGGGCGCC AAGT GGCGCCCTC            TTCATATTCAGACCG  93 52
LQF05_RS06525 1437053 .. 1437066 +  -5.9  -3.14132   GCATTCGCTGCAGCA               CGGCG TTCA TGCCG                TTGCTGCGCGAGGGC  49 107
LQF05_RS06555 1440973 .. 1440995 +    -4  -2.57211   CTGATCTGGGAAGAA           CATGCCATCT GAA AGGGGGCAGG           CTTATGAACGAGCAT  40 14
LQF05_RS06560 1441178 .. 1441208 +  -5.2  -3.65902   GATCGTCAGGCCGGG       CGGTCGGACCGCCC GGT GCGCTGTCAGAGCG       TTTCGATGAAGTGGC  54 43
LQF05_RS06590 NONE
LQF05_RS06595 NONE
         hda 1448853 .. 1448882 + -13.5  -2.52896   GGGCTGGTAGAGGAT       TGGCGGGCGCGCA TCGC TGCGCTTCCGCCG        TCCGTTCAGGCCTCG  72 31
LQF05_RS06620 1451714 .. 1451745 +  -5.8  -3.39505   GACGCGCGCAGCCAC      GCGTGCGGCCGGTTG GCT CAA-CGCTGGCACGC      TTCTGGCTATAACCT  52 104
LQF05_RS06625 1451984 .. 1452000 +  -9.4  -3.85698   GTCAGCGGCTGACTT              CAGGCC TGGAT GGCCTG              TTTCTGCGCAACGGG  73 29
LQF05_RS06635 1453323 .. 1453333 +  -4.6  -3.57792   GGAAATGGCGAAGCG                 GTCG AAG CGGC                 TTTCGGCATGAATCA  55 297
LQF05_RS06660 NONE
LQF05_RS06665 1458791 .. 1458808 + -11.3  -2.59971   GGATGCCGGCGAAGA             TGAGGCG CCGC CGCCTCA              CTATTAATTATTGCG  64 1
        aspS 1462319 .. 1462341 + -14.2  -3.36749   GAATAAGCGCTACCC           GAAGCCTGGT CAT GCCAGGCTTC           TTCGTCTTGCGGCTC  81 35
LQF05_RS06685 1463228 .. 1463252 +   -10  -5.71983   TGTCGCTGGAAGGAA         CCGGAGGTCGC AGTC GCG-CTTCCGG          TTTTTTTATGGTTCG 100 45
        ruvC NONE
        ruvA 1464538 .. 1464551 +  -3.7  -2.62616   AGAGATGATTCGCCG               CGCCC TCAA GGGCA                TGGTGTAAACCATGA  40 4
        ruvB 1465652 .. 1465662 +  -2.4  -2.62184   CGATTGGCATTTGCA                 GGGC CGA GCAC                 TAGTATGCGCGCGCA  38 62
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA 1468257 .. 1468273 +  -2.1  -3.41602   TCAAAATGACATTCA              CGCCTGA GGA TCTTGCG              TTGTGATCAACTCCC  44 3
        tolB 1469579 .. 1469591 +  -3.3  -4.56597   CTTACCTGAACTGAT                GCGGT ATC AACGC                TTTTTAACCAAAAAC  68 27
         pal NONE
        ybgF 1470973 .. 1470989 +  -9.3  -5.27477   CGTTAACGAACGAAA              CCCGCCC ACA GTGCGGG              TTTTTTCGTTAGAAT 100 50
        queE NONE
        queC 1472465 .. 1472488 +  -2.6   -4.2828   GTCACTGCCTCAGGC          TAAATTTTTT CAAA AAAAAGTTTG           TTTTCATCAATCAAA  60 72
LQF05_RS06750 1472625 .. 1472649 +   -10  -5.36441   CTTGGAGCAGGAAAA         GCCGGA-GGCC ACTA GGTCGTCCGGC          TTTTTTATATCCGCA 100 49
LQF05_RS06755 1474308 .. 1474327 + -16.4  -4.55128   AGTGATCCAAAGAAA            CCGCCGGC GCCC GCCGGCGG             TTTTCGTTTGGGGCT 100 36
        nadA 1475634 .. 1475655 + -12.3   -4.4773   ACCGAGTCAACCGAG           GCCACGCTT TTTC GAGCGTGGC            TTTTCATTGGTATGG 100 70
LQF05_RS06770 NONE
LQF05_RS06775 1478595 .. 1478613 + -11.7  -5.72622   GCGAATGATGGGAAA             GGCTGGC TCGGC GCCAGCC             TTTTTTGTTTCTACG 100 33
        dapA NONE
        bamC 1481925 .. 1481949 + -15.1  -4.16182   TTACACGAACACGGA          TAGGCGAAACC CAT GGTTTCGCCTG          TTTCGTTTCTGCTGA 100 56
LQF05_RS06800 1482926 .. 1482958 +    -2  -2.78384   CGGTAAAAAATCTAT     GCAGTTGGGGTTCGAC AAA GCCGA-TC-CAGCTGC     TATGATGCGCGCCGC  39 93
LQF05_RS06805 1483081 .. 1483106 + -13.3   -5.1417   TACATATAGCCTGAA         CCCCTGTACTC GCGA GAGTGCGGGGG          TTTTTGCTTTTCTGG 100 42
LQF05_RS06810 1485555 .. 1485566 +  -5.8  -3.28791   TCGCTGATCGACGGG                CAGC TGGG GCTG                 TTCTGACCGCCAGCT  52 8
LQF05_RS06815 1486082 .. 1486110 +  -7.3  -3.50853   CCTTCTTGCCGGCGA        TGGCTTCGACGTC GCT GACGCTGATGCCG        TTCTGCTTGGCGACA  60 155
LQF05_RS06835 1490087 .. 1490109 +  -2.6  -2.57522   AGCGGGTCGCTATAC          TGC-CCGGC AACTTC GCCGGAGCC           CTTCATGTCCCTTGA  38 67
        rmuC 1491683 .. 1491717 +  -5.7  -3.13403   GGCCAGCTCTCGGCC    GCC-GATCAGGACGAT CAGC ATCGCCTTGACCAGGC     TGTTGCTCAACGCGG  49 122
LQF05_RS06855 1497440 .. 1497485 +    -9   -3.4178   GGCAGCGCCTGGCGG CCG-ACTGACTGC-CCGGGCGG AGCT TCGCCTGGCGCCATCAGTTCGG TTATCGTGCGCTGCT  66 18
LQF05_RS06860 NONE
LQF05_RS06865 NONE
LQF05_RS06870 1500484 .. 1500498 +  -5.6  -3.04144   CCCAGTCCGTAAGCG               TGGCGC TGG GCGCGA               TCTTCACCGTCAGCG  48 463
LQF05_RS06880 NONE
LQF05_RS06885 1501434 .. 1501448 + -11.4  -6.11644   AAGCACCGAAGAAAA               CGGCCT TAT AGGCCG               TTTTTTTTTGCCTGC 100 72
LQF05_RS06890 1502385 .. 1502437 + -17.1  -3.53811   CAGCAATAAACGGAA CCGCTGGAAACGAAAACGCCCCGAT CTG ATCGGGGCGTTTTGCTTTGCGTCGG TTTCCGGCGGATCAG 100 32
LQF05_RS06905 1504762 .. 1504775 +  -9.5  -3.76125   GCTTACCCGCGGTGC               GCCCG GGTT CGGGC                TTTGAGTTAGACTGC  71 7
LQF05_RS06910 1505350 .. 1505372 + -10.5  -2.88544   CTCGGCTGGCTGCTC           GGCGAGCGC TGATC GCGCTCGCG           TATGTGGCGGTCAGG  62 14
LQF05_RS06940 NONE
        recJ 1512383 .. 1512399 +  -2.2  -3.29459   GGCTGAATCGGCTGG              CATTCC CCGGC GGAACG              TTCGATTGTTGCCTG  44 68
LQF05_RS06950 1514605 .. 1514653 + -10.2  -2.62735   GCATGTGCGCGGAAA CGGTCTCTACTGACGGGTGTCC AACCC GCATCCACGACAGTAGAGGCCG TCATGTCCCAGCTCT  60 68
LQF05_RS06955 NONE
LQF05_RS06960 1516532 .. 1516590 +  -7.4  -2.61548   CCAGCCATCATGAGG GCAAATCCGTTTCCTGACCGTCCGCCGG CACGC CCAGCGGGCTGTCAGC-A-CGGGTTGGC TGAGTTATAATCGCC  49 41
        prfB NONE
        lysS NONE
LQF05_RS06975 NONE
LQF05_RS06980 NONE
LQF05_RS06985 1522219 .. 1522231 +  -5.5  -2.63089   CGTCGCCGTCGAATT                TGCCA CAA TGGCG                CTCTTTGCCCTGATG  46 49
LQF05_RS06990 1522620 .. 1522649 + -23.7  -3.33696   GCGGGCATAAGAAAA       CGCTCCCGACGCA GCGC TGCGTCGGGAGCG        TTCGTTACGCGGGGC 100 63
         ppc 1527430 .. 1527453 + -15.3  -3.29511   AGCACGGGGCGCTGG          CGGCGGCGT CATTGC ACGCCGCCG           TTGTGCGCAACTCGC  86 45
         adk 1528321 .. 1528356 +   -17  -3.57144   TCGAGCGACACGCGT    CGATGATGCCCGTATC CCCG GATACGGGCATTTTCG     TTTCCGGCTGCGCGA 100 46
        tsaB NONE
LQF05_RS07025 1529511 .. 1529523 +  -4.7  -4.30719   TCGGGCTCGACCTTT                ACGCC TGA GGCGC                TTTCTTCTGCCGCAG  68 18
LQF05_RS07030 1530384 .. 1530404 +  -3.1  -4.36914   GCTGTCGCTGTTGGA            CTGAACGGG CCG CCTGACCAG            TTTTGTAAAACACCG  65 22
LQF05_RS07035 1531133 .. 1531144 +  -7.2  -3.12351   GGATATGGGCGGTTT                CGGC ATGT GCCG                 TTAGGTGTGCCAGCC  52 10
LQF05_RS07040 1532424 .. 1532436 +  -4.7   -3.5594   ACCTGAAACAGGCGC                CTCGG CAG CCGCG                TTTCGCAGGTGGCTT  55 453
LQF05_RS07050 1533858 .. 1533868 +  -2.4  -3.24021   GCTGCCCAGGAGTAA                 CCGC GAT GCGC                 TTCAATCTTTCCGCC  43 26
LQF05_RS07055 1537147 .. 1537162 +  -5.4  -3.28712   CAGCTCGCGCAGGTA              GGC-GAG CAA CTCTGCC              TTGTAGGCCGACGAG  49 232
LQF05_RS07065 NONE
LQF05_RS07070 1539545 .. 1539560 +  -2.4  -3.16217   CGCAAGCAATCCGAA              GCGATG CAGG CGGCGC               TCTATTCCATTTCCG  43 522
LQF05_RS07090 NONE
LQF05_RS07095 NONE
LQF05_RS07100 NONE
        bglX 1548218 .. 1548228 +  -3.2  -4.56597   GTAATTCGGAGGCGG                 TGTG TTA CGCA                 TTTTTCAACGGAAGA  68 163
LQF05_RS07110 NONE
        mdoH 1552854 .. 1552866 +  -3.4  -5.06414   GTGCAGCGAGATAGA                TCGA TTAAT TCGA                TTTTTATTGGCGCAA  80 520
LQF05_RS07125 NONE
        wrbA 1554665 .. 1554678 +  -8.1  -3.29263   GAGCCGCGCGACCGA               GGTGC CGCT GCACC                TTGTAGAAGCCCTGT  57 348
LQF05_RS07140 1555733 .. 1555767 + -14.2  -2.75992   CCGTTTCGCCGCCGC     CGTGCTGGTGGCCGTC GCT GGAGGCCACCAGCGCC     TGGTATTCCATGGGA  71 175
LQF05_RS07175 NONE
LQF05_RS07180 NONE
LQF05_RS07185 NONE
        dsbG 1564263 .. 1564288 +  -5.3  -3.63991   CGAAGACCTTCTTCG         CCAGGCTGGTGG CTG CCGC-GGCCGGG         TTCTTGCGAATGCTC  55 157
LQF05_RS07200 1565595 .. 1565605 +  -6.8  -4.30576   CGGCACCCTCGGCCA                 GCTC CGC GAGC                 TTTTCGTGGTAGCCC  72 102
LQF05_RS07240 NONE
LQF05_RS07245 NONE
LQF05_RS07250 1575501 .. 1575512 +  -3.6   -2.7634   CCTTGGCTTATACTC                CGGC GACG GCTG                 CTTTCGAGTCGCATT  41 116
LQF05_RS07255 1575836 .. 1575862 + -14.5  -5.03314   CCGGTCGCAGAAGAA         CGAAGCCCGTC CTGAT GACGGGCTTTG         TTTTTTGAGCCTGGC 100 43
        tcdA 1579346 .. 1579361 +  -5.4   -3.2614   TCTCGAATTCGCATC              TGACGG AAGT TCGTCA               TTCCTGTCGGCGATA  50 82
LQF05_RS07280 1580708 .. 1580735 +  -8.3  -5.67063   ATCGGAAATATTAAG        CCGGGACGCTC AGTTTA GGGTGCCCCGG         TTTTTTTGTAATCAA 100 52
LQF05_RS07285 1581645 .. 1581662 + -12.7  -5.28826   GTGTATGCTCCTTTG             CCCCGTC GCTT GACGGGG              TTTTTTATGCGCTTT 100 118
LQF05_RS07290 1582848 .. 1582870 +  -2.7   -3.7574   GGCAGCTAGCCACTT          GCGTCAGGCGT GGG ACGC--GGCGC          TGTTTTCCTCGTGGA  52 32
LQF05_RS07310 1585264 .. 1585285 +  -8.7  -3.32294   CGCCAAGGCGCCAGC           CGTACGGGA TCAA TCCAGTACG            TTCTCCAGGATTTCG  63 47
LQF05_RS07320 1587176 .. 1587192 + -12.3  -2.72344   CGCAAGAAGCCGACG              GCCGAGT GAC ACTCGGC              TGATTCGCCCTAGCG  69 17
LQF05_RS07330 1588000 .. 1588014 +  -3.4  -3.68351   CGGAGGTGTTCGACC               AGCTGG CCG CCGGCG               TTTAAGTCGTCGCAA  51 6
LQF05_RS07340 1589568 .. 1589599 +  -4.3   -4.4078   CGACACCCAGGCCTA      TGCCGAGCAGTGC CGGGTA GCGGTCCTCGGCG       TTTTCCTTGGCCGGC  69 381
LQF05_RS07370 1597386 .. 1597424 +  -8.6  -3.05521   TTCGTCTGTTGCGGG   CGCGACGCCGCGTGGCCG ATA CGTCTGCCCGTCGTCGAG   TGTTGCCGGTATCAT  56 46
        cysM 1598399 .. 1598439 +  -6.1  -2.71712   CCGGCATTCCCATAA CGCAGGGGTCCGCTGATG GCCAAA CGT-AGCGGCGCTCTGCG  CTTTCAACCCAGCGG  46 53
        rlmD 1599790 .. 1599804 +  -7.1  -2.70932   GCAGTATTTTTTTGA               CAGGC GACTG GCCTG               TGGTTCAACCGACCG  50 49
        relA 1602170 .. 1602194 +    -5  -4.18762   GGCCTACCGAAAAAT         GCGCA-TTGGC AATA GCCAACTCCGC          TTTTCGGTAGGCGTT  65 79
        mazG 1603099 .. 1603134 +  -2.5  -2.91728   GAAGGCCGAGCGGTC   GCCGTC-CTGCG-GCTG AAGA CGGCGCGCAGAGGTGGA    TGTCGTCTTGCGCAT  40 10
LQF05_RS07395 NONE
LQF05_RS07400 1604064 .. 1604099 + -16.8  -3.14132   AGTCTCTTCATGCAT    GACTGCGTCGCAGCGC TCCG GTGCCGCGACGCAGGC     TTACTCCCCGAACGG  89 51
LQF05_RS07410 1606128 .. 1606144 +  -5.1  -3.08133   GCAGCGCGTACGGGC              CGAGC AGCAGTG GCTCG              TTCACTACGTCGATG  47 284
LQF05_RS07455 1620781 .. 1620813 + -12.8  -3.85698   AGCGTCGCGGTGGTA     AGCAGAAACGGGAGC CCTG GCTCCCGTTTC-GCG      TTTCTGGCGCACCGG  86 40
LQF05_RS07460 NONE
LQF05_RS07465 NONE
LQF05_RS07470 NONE
LQF05_RS07475 1625089 .. 1625105 +  -5.8  -3.21218   AAGATGGCGCCGCAA              GTCTCC AGCAA GGAGGC              TTACTAATGGAGCAT  50 2
        nqrE NONE
        nqrF 1627003 .. 1627046 + -25.4  -3.24232   GCTGTCGCGTCTCTC CAGCCCGTCATCGCTGTCGC TCTC GCGACAGCCCTGACGGGCTG TCTGTTTCAGGACAA 100 69
LQF05_RS07490 NONE
        nqrM 1628318 .. 1628332 +  -4.2  -4.15044   AGAACCTTTTTGCGT               TTCGGC TTC GGCGAA               TTTGTTGACAGCAGC  65 109
        sthA 1629880 .. 1629909 +  -6.4  -3.57144   GACGATCCGGCAGCG       CCTGTG-CTGCCG AGTCG CCGCAGGCGCAGG       TTTAACGGTCAGGCC  60 132
LQF05_RS07520 NONE
        lolD 1633553 .. 1633588 +  -2.7  -4.25104   CGGCTGGAAGACGGG   CGCCTGGTG-GCC-GAAT GAT GTTCAGGCCCATCA-GCG   TTTTCATCGGCAGCC  60 8
LQF05_RS07530 1634821 .. 1634839 +   -16  -3.28712   TACGAATGACCGGCT             CGGCCGTC AAC GACGGCCG             TTCTGCCGCCGCCGC  89 32
LQF05_RS07540 1637719 .. 1637742 +  -2.2  -2.79796   GAAAAATGAGAACGG          CGGCCGTCGG CGAC CCGGTGACCC           TATGCTAGAGTGGCG  39 32
LQF05_RS07545 NONE
LQF05_RS07550 1638817 .. 1638838 +  -5.7  -2.69964   GCTGCGGATCACCAC           GGTCGAGGC GCAG GCGTCGCCC            TGATGTCCTTCGCCG  46 1
        lpxK 1639851 .. 1639871 +  -7.6  -2.52543   TCTCTCTTAAGCCGC           TCGACCTGC CGCC GC-GGTCGA            TCGCTTCCAAGGACT  52 31
LQF05_RS07560 NONE
        kdsB NONE
LQF05_RS07570 NONE
        murB 1642395 .. 1642417 + -19.2  -3.92996   GATAGCGGTACCCAA           CGCCCGATGC AAT GCATCGGGCG           TTCTTGTATCTGCCG 100 98
        rluC NONE
LQF05_RS07590 NONE
        sppA 1649297 .. 1649312 + -10.4  -3.40403   GCCGGGGTAGTGCTC              GGCCAG TGCT CTGGCC               TTATGCTCGGCAAGG  67 450
LQF05_RS07605 NONE
        rpmF NONE
        plsX 1651374 .. 1651391 +  -5.5  -3.61398   CCAACTGAAATTCGG             TACGCCT GCAT GGGCGTG              TTCTTCAGACGAACA  57 33
        fabD NONE
        fabG 1653146 .. 1653163 +  -7.7  -3.77666   CGCCAAACGCAGGAG             GACAGTC AAAC GGCTGTC              TTTAAATTAGCTATA  67 47
        acpP 1653581 .. 1653609 + -14.6  -4.86731   CTCGGAATCAAGAAA        GCCGCACTGCCT TGATC GGGTAGTGCGGC        TTTTCTTTGAGAGGG 100 52
        fabF NONE
        pabC NONE
        mltG NONE
         tmk NONE
LQF05_RS07655 NONE
LQF05_RS07660 1658867 .. 1658890 +  -3.2   -3.3217   GTCCCGGTGCCGTAC          GTCAGGCGT CGTTGTA ACGCCT-AC          CTTTTCTGATTCCCC  47 48
LQF05_RS07665 1659732 .. 1659751 +  -5.6  -3.71527   TCCGCTTGCCCGGGT            TCGCGGCT GAAA GGTCGCGG             TTTCCGTGCTTGCAA  60 16
LQF05_RS07670 1661375 .. 1661389 +  -3.5  -4.58685   CATTAGCGGTCTGCT              G-GCGG ATTT CCGCGC               TTTTTAAACGCATTT  70 184
LQF05_RS07680 NONE
LQF05_RS07685 1664241 .. 1664256 +  -4.6  -4.18018   GTGGATGCTGCATTG              CCGGTG CGAT TGCCGG               TTTTCCGTCACCGGC  65 86
LQF05_RS07690 NONE
LQF05_RS07695 1665556 .. 1665571 + -10.4  -4.93547   CAACGGCATAAAAAA              GGCTCC CGAG GGAGCC               TTTTTCGTTGCTTAC 100 60
LQF05_RS07705 NONE
LQF05_RS07710 1669286 .. 1669302 +  -9.4  -5.14563   TCGCTGTCGAAAGAA              CCCGCT CATGT AGCGGG              TTTTTTCATGGGCGG 100 47
LQF05_RS07715 NONE
LQF05_RS07720 NONE
LQF05_RS07725 1671376 .. 1671391 +  -3.2   -3.5393   CGGACCGCTAGCGCC              CCGTCT GGAT AGACTG               TTTCGCCCACATGCT  49 30
LQF05_RS07730 NONE
LQF05_RS07735 1673576 .. 1673590 +  -5.6  -3.77832   GCAGCCGTCGTCGGT               CAGCAG GCG CAGCTG               TTCTTCGGTTTCCAC  60 147
        pyrF 1677179 .. 1677200 + -17.3  -4.07246   AAGCGCGAACGGGAA           GGCCGAGCC ACTG GGCTCGGCC            TTTGATTTCACCTCG 100 39
LQF05_RS07760 1679242 .. 1679266 +   -10  -2.59683   CGGACCCAGATGAAG         CGGC--GGCGCC ACA GGCGCCACGCCG         ATTCTGGGATCAGGT  60 62
LQF05_RS07770 1681715 .. 1681755 +  -3.8  -4.20516   ACTCCTGATGTGACG  GCGGGGCTGAACGAACGG CTCTT TCGCTCGTACAATCGCGC  TTTCTTCCATCCAAC  62 33
LQF05_RS07775 1682336 .. 1682346 +  -6.8  -2.52896   GCATGTCTCGCTGCG                 CGAG GGC CTCG                 TCGGTTGCCCCCTGA  47 311
LQF05_RS07785 1684062 .. 1684075 +  -2.3  -4.42386   GGTGCATCCAGGTTG               TCAGG GTCT CCTGC                TTTTGTACCTGGCCG  65 232
        katG 1688506 .. 1688539 + -19.5  -3.55444   ACTGTCCGCCTAAGT     GCCGCGGCGGCGTCC TGCG GGGCGCCGCCGTTGC      TTTCAAGCCTGACCG 100 28
LQF05_RS07810 1689440 .. 1689496 + -19.3   -3.9009   CTTGGCCGAGGTACG CAGCGCGACCAGCTGATCGGCCTGTCG GGC CAGCTCGTCGAGCAGCAGGTCGCGCTG TTTCTCGGCTGCCTT 100 77
        gcvA 1692403 .. 1692426 +  -2.3  -3.73068   ATCATCTCGTTCAGC          TCGGCGCCT TCGATC AGCCGCAGA           TTCTTGCCTTGGGCG  53 417
LQF05_RS07855 1701276 .. 1701294 + -12.4   -3.3785   TTTCCGAAGCGGCTG             CGGCGCTG GTG TAGCGCCG             TTCTCCATGAATTCG  76 12
LQF05_RS07860 1703191 .. 1703207 +  -7.9  -3.73775   TGTTCGCCGGGCAAC              GGCCGCA GCG TGCCGCC              TTTCATCGCCCTGGC  65 314
LQF05_RS07880 1708444 .. 1708465 + -12.3  -3.14051   CGTCCGTTTTCGCCC           GGCGC-GCAG TTC CTGCAGCGCC           TGTTCGTAGGAGTCG  69 395
LQF05_RS07895 1710330 .. 1710352 +  -6.3  -2.94144   TTTCCAGGCGCAAAG          CG-TGACCGG CCGG TCGGTCATCG           TGCTTTACCTGAACC  48 70
LQF05_RS07900 1711184 .. 1711204 + -19.7  -4.64383   ACACTGCGCAAGTGA            CGCCCCGCC GAT GGCGGGGCG            TTTTCATTTCTCATT 100 105
LQF05_RS07905 NONE
LQF05_RS07910 NONE
LQF05_RS07915 NONE
LQF05_RS07920 NONE
LQF05_RS07925 1715652 .. 1715678 + -15.2  -4.28432   TGGCGCTGAAAAGAA         CGCCGCGAAG CGCTAAA CTTCGCGGCG         TTTTCCGTTCAGGTT 100 69
        queF 1716511 .. 1716565 +  -7.7  -4.13945   GCTGATGGTGGACAA CCGC-CGCCTGGTGCGCCA-GTGACGC AGC GGGTCGCATGGCGCGACCCGCGAGTGG TTTTCAGATGCCCAT  71 4
LQF05_RS07940 1718023 .. 1718037 +  -5.6  -3.71873   TTGTGTCGCCATGTT               CCAGCG CGA CGGTGG               TTTCGATCTGCATCC  60 296
LQF05_RS07950 NONE
LQF05_RS07955 1720114 .. 1720172 +  -9.6  -3.34222   CGCGGTTCGGATGCG CGGCCCGGCTCCAGCTTG-CG-CTCCAGCG TGC CGCTGGCGTCGGCGAGCTGG--CCGAGCAG TTCTGGGCTGATGGT  64 184
LQF05_RS07970 1723282 .. 1723293 +  -7.2  -4.35327   GAAAGTCAACCAATA                CGGC GAAC GCCG                 TTTAATTTTTGATAC  74 9
LQF05_RS07980 1724636 .. 1724653 +  -5.5  -3.05596   TCTACCGTACGTTCT             GTCCTGC AAGT GCAAGAC              TTCGATCGCAACGTG  49 98
LQF05_RS07985 1727379 .. 1727395 +  -9.5  -3.14132   AGCTAAGGCAGAGTT              GGTTTAG ACT CTAAACC              TTAGTGCCGGACAAA  61 132
LQF05_RS08030 1738064 .. 1738077 +  -2.3  -3.34028   GCTTTAAGACGGATT               CGCAA CGTT TGGCG                GTTTTAGTTTGAATT  44 71
LQF05_RS08035 1738548 .. 1738559 +  -5.8  -4.99134   TTTAAGCGGGATTCA                TGCC GCGT GGCA                 TTTTTGGTTTGCGGT  84 61
LQF05_RS08040 1739232 .. 1739255 +   -16  -3.37499   TAACAACTCATTCAA          GCCGACGCCGC TTC GCGGCG-CGGC          TTAATTCAGGTGTTG  89 38
        floR 1740762 .. 1740793 +  -8.8  -3.80893   TCGAAACCTCGTGAA      TG-GCGGTATCCTGT CTG GCAAGATACCGCTCA      TTTCCCTTGTCCCGT  71 85
LQF05_RS08065 1743791 .. 1743804 +  -2.4  -2.65815   CGAGGCAGTTCCATA               GGAT GGCAAG ATCC                TGGTATCGGTCTGCG  38 337
LQF05_RS08075 1745365 .. 1745382 +  -2.6  -3.53224   CGCTAACTTTGCAAC             AGTGCC TTCTAC GGCACG              TTTGAAGGCGCGCTG  47 72
        aadB 1746860 .. 1746883 +   -16   -3.0792   TAACAATTCGTCCAA          GCCGACGCCGC TTC GCGGCG-CGGC          TTAACTCAGGTGTTA  83 38
       dfrA1 1747415 .. 1747449 + -11.4  -3.60805   CAACGGATTCGCAAA     CCTGTCACGCCTTTTG TAC CAAAAGCCGCGCCAGG     TTTGCGATCCGCTGT  77 51
LQF05_RS08095 1748426 .. 1748443 +  -4.7  -3.07233   AAGTCGCTGCGGAGG             CCGACGC CATG GTGACGG              TGTTCGGCATTCTGA  46 11
        sul1 NONE
LQF05_RS08105 1750063 .. 1750075 + -10.5  -4.10657   GTCATCGCCGCCGAC                GCCCG TGC CGGGC                TTTTCGGGCCTGTCA  80 187
LQF05_RS08115 1751457 .. 1751472 +  -3.9  -3.14931   CCCCTTCACGGAGTC              GCCCT GGGGTA GGGGC               TTCGTAACGACTGCA  45 310
LQF05_RS08125 1752730 .. 1752750 +  -4.7  -3.48288   CTTTCAAGCCTTCTT            CGATAACTC ATG GGCTTATCG            TTGTCCTATGGGTTA  52 154
LQF05_RS08140 NONE
LQF05_RS08145 1757047 .. 1757062 +  -8.2  -4.57341   GCAGGCATAAAAAAA              CCGCCT GAGA GGGCGG               TTTTTCCCAAGCGTT  79 137
LQF05_RS08265 1778534 .. 1778553 +  -6.4  -4.19238   TAACGTCTGGTGCTG            CGTTTACC TGTT GGTAGGCG             TTTTCGAGTTCAGCC  68 154
LQF05_RS08325 NONE
 aph(3'')-Ib NONE
LQF05_RS08335 NONE
       tmexC NONE
       tmexD NONE
LQF05_RS08365 1795256 .. 1795276 +  -8.3  -3.26471   AGGCTAGCCATTCTT            GTCCTCC CACACGT GGAGGAC            TTGCTATGAACATCA  57 264
LQF05_RS08370 1796320 .. 1796332 + -10.5  -3.04144   TACCAGCGGCTCGAC                CCGCC AGA GGCGG                TGTTCGAAGTCGGGG  62 443
LQF05_RS08405 1802892 .. 1802923 +  -6.7  -2.64933   AGCTCCGCCGGAATA      GGGT-TCCATCC GCACATCAA GGATGGAGACCC      TCATGTACCTGGCTG  49 250
LQF05_RS08410 NONE
LQF05_RS08415 1805955 .. 1805970 +  -2.5  -3.06569   CAGGTTCGACTGCGA              CTGTC ACCACG GGCAG               GTTTTGGCCGGTTAG  41 55
LQF05_RS08420 1806865 .. 1806891 +  -4.3  -2.70932   AAGCGAAGCAAGCCA         GCGTCAATCGG CTCGC CCGGCTGGTGC         TCCTTCCACAGCCAC  43 231
LQF05_RS08435 1812112 .. 1812131 +  -6.4  -3.39505   TCGCCGTCGCGCGCG            CCCATGTCG TAG CGGC-TGGG            TTATAGGTATGCCCT  56 375
        umuD NONE
        umuC 1814761 .. 1814773 +  -9.1  -2.63901   GCTGGTTCGCGCGAA                GGGGT TCT ACCCC                GTTAATTCGTCCACT  56 47
LQF05_RS08470 NONE
LQF05_RS08475 1819021 .. 1819031 +  -5.4  -6.15259   ATGCAGTGGCGAAAC                 GACT TTG AGTC                 TTTTTTTTTAAGTTG 100 41
LQF05_RS08480 1820090 .. 1820101 +  -2.2  -2.87211   GCTGTCGGTAGAGTA                C-CCG GTG CGGCG                TCTCTGCCAGACCCT  40 414
LQF05_RS08490 1822488 .. 1822498 +  -8.2  -3.33525   GAGGGCTCGAATGGC                 CGCC TTC GGCG                 TGTTCTGTGAGTCGC  59 117
LQF05_RS08495 NONE
LQF05_RS08500 NONE
LQF05_RS08505 1829077 .. 1829088 +  -5.8  -3.15663   ACCAGAGGAGACGGA                TGCG TGAG CGCA                 TTCGTCACCGTGCGT  50 19
LQF05_RS08510 1830393 .. 1830408 +  -5.4  -2.52464   GCGCAGTGAGCTGAT              GGTGGT TTGA ATCACC               TGAATTAAGAAGAAG  45 16
        zorA NONE
LQF05_RS08520 NONE
LQF05_RS08525 NONE
LQF05_RS08530 NONE
LQF05_RS08535 1841622 .. 1841637 +    -4  -3.04144   ACAAAGGCGGTAGTT              GAGACT CGAC AGTTTC               TCTTGCAACTCAAAA  43 183
LQF05_RS08555 1847756 .. 1847782 +  -5.1  -3.01712   CCCTCAGCGCGTCGC        TGCGGGC-G-CGG CAT CCGTCTGCCTGCG        TGTTGCAGAAAACGG  46 109
        benA NONE
        benB NONE
        benC NONE
LQF05_RS08575 NONE
LQF05_RS08580 NONE
LQF05_RS08585 NONE
        catC NONE
        catA 1855623 .. 1855646 +  -4.6  -3.39895   CCGGGCACCGCAGCG          GCG-CTGCA CCGGTAA TGCAGCCGC          TTCATTCATAACAAG  49 64
LQF05_RS08600 NONE
LQF05_RS08605 1858752 .. 1858764 +  -3.3  -3.55761   TGAGACGAAAGGCTT                GATCG AAA CGCTC                TTTAACAACTGAATC  49 472
LQF05_RS08610 NONE
LQF05_RS08615 NONE
LQF05_RS08620 1860900 .. 1860920 +  -2.6  -4.09243   CGCGTCAAGGTAAAA            TTTGCGTG TTCTC TATGCAAA            TTTTCGGCGAATGTC  57 201
LQF05_RS08625 1863876 .. 1863890 +  -2.8  -3.03243   CTTGACCATATAACA               CCCAAA CAA TTTGGC               TGTTAGACGGTAAGT  41 32
         rrf 1864127 .. 1864164 + -22.1  -4.07568   CGTCAAGCTCCTACA   CCAAACCCCCGATCCGC GTAA GCGGGTCGGGGGTTTGC    TTTTGGGGCGCGGAA 100 33
LQF05_RS08640 1870118 .. 1870149 + -10.2  -2.79581   CCAAGCTCCAGCGCT      GCCTCT-CGCAAGGT GGT GCCTTGCGCATAGGC      CTTCTTGGCGATTTC  60 312
LQF05_RS08650 NONE
LQF05_RS08655 1872439 .. 1872458 + -16.4  -4.18042   GCTAGAATCGCGCTC            GCGCCGGC CCAC GCCGGCGC             TTTCGTTTGTATCCG 100 78
LQF05_RS08660 NONE
LQF05_RS08665 NONE
LQF05_RS08670 1875961 .. 1875977 +  -9.3  -3.01712   TTCGCCGCCCCGAGC              CAGGCGG CGA CCGCCAG              TCTTAAGGCGCCAAA  60 90
LQF05_RS08675 1878038 .. 1878059 + -17.3  -3.55219   ACGGCGCGTGGCAGA           CGCGGCTCG CGCA CGAGCCGCG            TTATCTGATCGCCTT 100 40
        arfB 1879674 .. 1879686 +  -4.7  -3.05384   GGTCAGGTGCCGGTG                CGCAC GTC GGGCG                TTGCCTCGGCGGGCG  46 41
LQF05_RS08705 NONE
LQF05_RS08710 1885571 .. 1885586 +  -6.1  -3.28712   GGCCGAGCACTTGCT              CGAGC TGCCGC GCTCG               TTCTGACGGAGCCAG  52 4
LQF05_RS08715 NONE
LQF05_RS08720 NONE
LQF05_RS08725 NONE
LQF05_RS08730 NONE
LQF05_RS08735 1890724 .. 1890749 +    -6  -5.64274   GCGGCGGAGAACGAA         AGGGCCTGTC CGATGT GACCGGCCCG          TTTTTTTATGCCTGA  95 58
LQF05_RS08740 1892025 .. 1892046 +  -5.9  -3.51329   AACCCGTTCGGCGTC           TTATACACC ACTT GGTGTCTAA            TTATAGTTAGGCATA  55 349
LQF05_RS08745 1892466 .. 1892484 +  -5.3  -3.30124   GGGCTAAAGCCCGCC             CCTTAAC CAAAC GTTAGGG             TTCTGACCAATAAAG  52 96
LQF05_RS08750 NONE
LQF05_RS08755 1893841 .. 1893852 +  -2.2  -3.19371   GCGTCGCTTAACAAC                TGGT TCAA ACCG                 TTCGCTTCGCTCACT  43 30
LQF05_RS08760 1894646 .. 1894663 +  -8.3  -3.81339   CACCTCATTGTTCAT             TCCCGCC GTAG GGCGGGC              TTTGCGTTGTGCCTG  67 160
LQF05_RS08775 NONE
LQF05_RS08780 1899317 .. 1899333 + -10.8  -5.86332   CGGATGGTTGACCGA              GCGGCC CCTGA GGCCGC              TTTTTTTTGCCTTCA 100 149
         acs 1903339 .. 1903388 + -12.2  -3.01712   GAAGAGTTGTTCATG GGGGGCTCCGACGA-AGACATTC TCAAT GAATGACTCTTGCCGGAGCCGCC TGTTCGCCACCGCAG  72 487
        fadB NONE
        fadA 1909314 .. 1909332 + -13.1   -5.8096   GCCGGTGCATGGAAG             CCGGGGC CTGGT GCCCCGG             TTTTTCTTTTTTGTC 100 109
LQF05_RS08815 1909838 .. 1909850 +  -9.1   -3.0814   GTATTCAAACTGCCG                GAGGC GCC GCCTC                TGTTCACCTCTAGAT  60 265
        topA 1912494 .. 1912524 + -23.4  -3.37344   AAGCGCTGATCCTGG       CTCGACCGACTCGC CAG GCGAGTCGGTCGGG       TTGATTGCCTCACGG 100 32
LQF05_RS08825 NONE
LQF05_RS08835 1914546 .. 1914560 +    -7  -3.15544   GCCTCGCCCAGGCTG               GCGGCG TTG CGCAGC               TTGCTGCGGGTCGCG  51 135
LQF05_RS08850 1916541 .. 1916551 +  -2.4  -3.98842   ATCGGCTAAGCTAGC                 CGCC CAT GGCC                 TTTCTCGATCTTCTG  54 60
LQF05_RS08855 1917081 .. 1917092 +  -2.2  -3.41693   AATAAGGATTCGCGT                CTGT ATGC ACGG                 TTCATTGATGCTGGA  44 36
        nagZ 1918069 .. 1918085 +  -2.2  -2.96779   GCGCTGAAGGCTGCC              GATCTG ATTGA CTGATC              CTTCTCTTTTCAAGG  40 11
LQF05_RS08865 1918909 .. 1918919 +  -2.4  -3.90048   GTTGTCATAATGCGG                 CCTG AGA CTGG                 TATTTTTGCGGCGGC  54 89
LQF05_RS08870 NONE
LQF05_RS08875 NONE
LQF05_RS08880 NONE
LQF05_RS08885 1922963 .. 1923010 +  -6.8  -3.65902   CGATGAGTTCCAGCA GTGGCTCGCCG-AGGCGCAGCGC TTC GCGGTGGGCCTGCAGCAACCCGC TTTCCGTCCACTGCA  59 220
LQF05_RS08900 1927316 .. 1927336 +   -14  -3.18274   CGCCCTGACCACACA            CGTCCGGG CGATC CCCGGACG            TTCCATTCACGTCGC  78 33
        betB 1928846 .. 1928858 +  -4.8  -2.52623   ACAGGTGGAGCTGGG                CGAG TTCGC CTCG                GTGTTCTGAGGGAAA  42 4
        betA 1930625 .. 1930644 + -16.4  -4.34402   GCGCAGAAATGAAAA            CGCCCCGC TAGT GCGGGGCG             TTTTCCTGTAGCGGA 100 94
LQF05_RS09015 NONE
LQF05_RS09020 1952704 .. 1952717 +  -2.3  -3.14132   AGAGGAATAGGTCGG               CCAGC TAGC GCTGA                TTCATAAAGGCGCGA  43 31
LQF05_RS09025 1954084 .. 1954126 +  -2.5  -3.16683   CACCGAAGACAGGTT GACGATGGCGCCGC-CCCTG CCGC CATGGCGCGTCGACATCCGC TTGATCGCCTCGCGT  42 362
LQF05_RS09035 1955093 .. 1955110 + -14.1   -4.8622   CCGCTGACAGGAGAA             GGGCGCC GCAT GGCGCCC              TTTTTCATTCAAGCA 100 42
        leuC NONE
        leuD NONE
        leuB 1959505 .. 1959530 +  -4.6  -3.58698   GAAGTTGTAATCTTT         CGGCCCGC CTTAATCTGC GCGGGCCA          CTTTTTCTATAGGTG  54 31
         asd 1960691 .. 1960710 +   -15  -4.34402   CTTGAAGTGCCGAAA            CGCCGCGA TTCG TCGCGGCG             TTTTCGTCTGCGCAG 100 50
LQF05_RS09065 1961846 .. 1961863 +  -2.6  -3.35679   CAAAGAATATTTCTA             GCCGAT GCGCTG AACGGC              TTATCGCTGAAGGGG  44 60
LQF05_RS09070 NONE
        truA 1965588 .. 1965602 +  -3.5  -3.94438   GCTCCGCAGCATTCG               CTTGC AGCTG GCAGG               TCTTTTGTTACCATC  56 50
LQF05_RS09080 1966326 .. 1966357 +    -3  -4.59773   GACCGGCACCGTTTC      GCTGATTCATCTCCC CAC GGGCGGT-AATCAGG      TTTTTGCGGATGCGC  68 82
        accD NONE
        folC NONE
LQF05_RS09095 1969306 .. 1969338 +  -9.7  -2.68719   GAAGCTGACTCGCTG      AGCGGCTGGTCAGGC AGC GGATGGCCAGCCGCA      GTTGTCCTCTCATCG  56 33
LQF05_RS09100 1969925 .. 1969943 + -13.2   -2.7693   TGGTTCGCTGGTTCG             CTCAACCC GCC GGGTTGAG             GTCTTTCGTTTACGG  73 8
        purF NONE
LQF05_RS09110 1972782 .. 1972815 + -18.9  -3.57651   CTCTGAGCCAATGAT     TCCTCAGCGGCAGCC GTTG GGCTTCCGCTGAGGG      TTGTCTCATCTCCCG 100 35
LQF05_RS09125 1975810 .. 1975820 +  -2.4  -2.76189   ACGAAAGTCCGGCCG                 ACGC GCA GCGG                 TAGTTCAGTCGGTTA  39 59
LQF05_RS09130 1975929 .. 1975943 + -11.4  -5.60993   GGTGGAACAAGGAAA               GCTGCC AAG GGCAGC               TTTTTTTGTGCCCGC 100 64
LQF05_RS09175 1986797 .. 1986828 +  -4.2   -4.0371   CCAGCGACAGCTGAT      GTGGTCGGTCGACG ATCT CGAACACCGGCCGC       TTTGTATAACAGCTC  61 85
        wrbA 1988483 .. 1988534 +  -8.6  -2.64695   CGCAGGTGCTGGCGG TGGTA-TCGCCGGATGAGCCGCTCG CTA CGAGGCGCTCGATCGGCGCTTGCCA ATTGGTTGGTGCTGG  52 10
LQF05_RS09190 1990025 .. 1990079 + -12.4  -3.53012   AGGCGCCGGATGGTG TCGTCCAGATCGGGACG-GCCGACGAA AAAG TTC-TCGGCGCGTCC-GGTCAGGATGA TTTCGCCGCCCGCCG  75 377
LQF05_RS09200 1993340 .. 1993350 +  -8.2  -3.03124   AGCCGCGGCCGAACA                 GGCG CGT CGCC                 TGTTGCAGCGTGACG  56 450
LQF05_RS09215 NONE
        cydB NONE
LQF05_RS09225 1997577 .. 1997589 +  -5.5   -3.6279   CGTTCATGATTGCGC                GGTAG CTG CTGCC                TTCTTCGGCCAGTTT  57 476
LQF05_RS09240 NONE
LQF05_RS09245 2002088 .. 2002109 +  -2.9  -2.55015   CGAGATGAAGCGCCG           CCTCGCCGCC TAT GGCGGT-AGC           TGAATTAGCTAAGCT  38 1
LQF05_RS09250 NONE
LQF05_RS09255 NONE
LQF05_RS09260 2005869 .. 2005893 + -17.2  -3.35679   GCCCTGCCAAAGGCC          GCTTGGCCCG CTCGC CGGGCCAAGC          TTATCGGTCAGCCCC  93 159
        pdxB NONE
        dnaX NONE
LQF05_RS09280 2010878 .. 2010908 + -15.3  -5.12617   GCGCGCAGTTCCAGC       CGGGCCGCCCCTC TCGCT GTGGGGCGGCCGG       TTTTTTCAGTGATTC 100 45
        recR 2011624 .. 2011644 +  -3.3  -4.53034   TAAACGTTAGATAAC            CAAAGCG AATATAG TGCTTTG            TTTTGGTTATATGCG  68 111
LQF05_RS09290 2012701 .. 2012723 + -10.5  -3.66908   CTTTCGGCAACACAA           AGGCCCGAC CCTGA GTCGGGCCA           TTCATTTTGCCCGCA  73 53
LQF05_RS09295 NONE
LQF05_RS09300 2014299 .. 2014311 +  -4.7  -4.10429   TACGTCTGAGGTTCG                GCCGG TGC CCGTC                TTTTCGCACATCGTT  61 32
LQF05_RS09305 2015229 .. 2015243 +  -5.6   -3.1247   GCCCAGTGCCCTGGA               CAGCCG CTG CAGCTG               TTCCATATCGCCGGT  49 250
        nadE 2019994 .. 2020032 +  -8.6  -3.04144   CCATGCTGATCAACA   GCAACGCGGCAACGACAC GCA GTGCCGTCGCCGCCGGGC   TATTCGCAATCGCCC  56 489
LQF05_RS09395 2032872 .. 2032890 + -13.1  -3.05384   GCTCTCGCCGGCGCG             CGCCGCC TCGAT GGCGGCG             TTGAGTGCCAGCAGG  72 502
        rlmM NONE
        tusA 2038641 .. 2038654 +  -5.9  -3.21276   GTGTCAGAGATCCGG               CGCGG CGGC TCGCG                TATTCTGCCGCCGCC  50 78
LQF05_RS09440 2044040 .. 2044056 + -12.3  -2.87132   CCGGCACCAGTACAC              CCAGTGC CAT GCACTGG              TATGTGACGCCGCGC  66 190
        moaA 2046627 .. 2046643 +  -7.9  -4.03234   CGCCATAGAGCATGG              CGTGGCC CGC GGCTGCG              TTTCTGTGCACCGAC  71 95
         smc 2050289 .. 2050302 +  -4.5  -4.72272   AACCTAGGATTAAGC               CGCTT GTTT GAGCG                TTTTTGATACAAGGA  73 34
        zipA 2051288 .. 2051304 + -10.8   -4.4595   TGATACTCTACCGAA              CCGGGC CTTGT GCCCGG              TTTTGCGTTTTGTGG  89 38
        ligA 2053932 .. 2053942 +  -6.8  -2.80074   CGGTAGACACATAGC                 GCAG CAG CTGC                 TCCTCTTCTGCAAGC  50 27
LQF05_RS09475 2056733 .. 2056760 +   -20  -4.74103   TGCTACGATAGCCGC        GGAGGAAAGGGG GTCA CCCCTTTCCTCC         TTTTTGCGTTGGGAG 100 50
LQF05_RS09480 NONE
        fliD 2058859 .. 2058875 +  -2.2  -3.07895   GTTGAACACGCTTTG              GAGTTC CCAAT GAACGC              TATGTTGGCCATGAA  41 139
        fliS 2059269 .. 2059281 +  -4.1   -3.8377   AGAAGCTGGCTGGAC                TTCAG CTG CTGAG                TTTAATGTCGGAATT  54 40
LQF05_RS09495 2059769 .. 2059784 +  -6.8  -3.60098   CGAAGGTTTCCCAGA              C-GCCGG CTC CCGGCAG              TTTCACGTCCAGGCT  59 198
LQF05_RS09510 2060818 .. 2060835 + -12.7  -5.00884   GGTGATAAACAAAAA             GGCTGCC CAAG GGCAGCC              TTTTTTGCGCGAGCT 100 105
        sdhC NONE
        sdhD 2063205 .. 2063224 +  -2.8  -2.50935   TTCGTCTGGGGCGTG            CAGATTCT TTGG GGTATCTG             ATTCATGGCTAACAT  37 5
        sdhA NONE
LQF05_RS09535 2065781 .. 2065813 + -14.2  -4.26076   CTTTACCCGTAACAC     CTGCGGCGCCGAAGT CGAA GCT-CGGCGCCGTAG      TTTTAGTAGGAATCC 100 90
LQF05_RS09540 NONE
        odhB 2070157 .. 2070204 + -12.6   -3.9373   GATAGAAACGCCCCG GGCTGCAGTTGGCAGGTCAGGT GAAA GCCGGTCTTGCTGCCTGCAGCC TTTGGCTTTTAGCTG  86 39
        lpdA 2071697 .. 2071726 + -17.9  -4.09685   TAGTGCTGTACCCGG       GGCCCGACGTATC CAGC GATACGCCGGGCC        TTTTGCAAACTGCAG 100 47
        sucC NONE
        sucD 2073928 .. 2073947 + -16.4  -4.87893   GGCCTGATGAAAAAA            GGCCCGGC GAAA GCCGGGCC             TTTTTCGTTGGGCTT 100 34
        brnQ NONE
LQF05_RS09570 NONE
LQF05_RS09575 NONE
LQF05_RS09580 2077386 .. 2077429 +  -2.5  -3.05463   ACGAGCCCTGACGCA TCG-A-CGGGTAGCGGCGCTGC GGA GT-GCGCTGTTACCCCCTGCGA TTGCGTGAAGGAACT  41 30
LQF05_RS09585 2078690 .. 2078730 +  -8.9  -2.52834   CTGATCGAGCCCTGA TGC-GGGTCGGCCGGCGC CAAGTC GCGTCGGCCGCCCTTGAA  ATTCGTCGTCCCGTC  56 26
        htpG 2080738 .. 2080758 + -18.3  -3.84451   ACGCAGTAAACAAAA            CGGCCCGTC ACT GACGGGCCG            TTTGCGTTTACGAAC 100 48
LQF05_RS09600 2082475 .. 2082501 +  -6.4   -2.7044   CGACGTCATAACCTG         CCGGCTCCGTAC ATT GGAAGGAGCAGG         TCATGTCGTTCACTC  50 61
LQF05_RS09605 2083083 .. 2083099 +  -2.9  -2.98034   CCGATAAATGAAGCA              GGTCACG GTT TGTGACG              TCGTTTCAATTCATG  40 134
LQF05_RS09610 2084781 .. 2084791 +  -5.4  -3.01915   GGAGTTAGATTCTCA                 GTTC CGA GAAC                 ATATTTTTATGCCAG  49 52
LQF05_RS09615 2086544 .. 2086597 +    -8  -2.63112   GACAGCTAATATGGG CATTTTTCGCCCTCCCGTG-ACAGC ACAAC GCTGGGCACGGGCGGGCGAGCGGCG TACTATCCCGCGTTT  52 77
        sstT 2087933 .. 2087949 + -15.1  -3.50045   TAACGGAAACAAGAA              CGGCGCC TAG GGCGCCG              TTCTCGTGTGTCACT  90 50
LQF05_RS09635 NONE
LQF05_RS09640 NONE
        sixA NONE
LQF05_RS09650 2092787 .. 2092797 +  -6.8  -3.02144   TAACTGGAACAACCT                 GCTC GAC GAGC                 TGTTCGAGCAGCTCG  52 310
LQF05_RS09660 2094326 .. 2094337 +  -4.4  -3.28783   TTGCAATACTCTCTC                GCAA AGCC TTGC                 TTGACTTGCTTTTGC  49 55
LQF05_RS09665 2095364 .. 2095393 + -14.3  -3.27408   CAATAGCCGACTCTG       TCGACGCACCCAA TGCA TAGGGTGCGTCGG        TATCTTTGCGTAGAG  86 57
LQF05_RS09670 2096571 .. 2096597 + -12.3  -2.58861   GTCATGAGCGACGAT         GCGCCCGAG GGCGATCAG CTCGGGCGC         CTTGTAGAACTCGTA  64 84
        selD NONE
        mnmH NONE
LQF05_RS09690 2100130 .. 2100143 +  -4.5  -3.71794   GTGCGGCCTGGGCAG               CCGTT GGCG AGCGG                TTTGGCTGGTTCGGT  57 74
LQF05_RS09695 2101274 .. 2101329 +  -3.8  -3.53444   CGAGGTGCCGGCGCT GTGAGGCAGCTGTC-CGCCCCGTAC TGCGGGC GTCCGGCGTGAGGTTGCTGCCGCGC TTTCGCGACCGCTGG  49 22
LQF05_RS09700 NONE
LQF05_RS09705 2104250 .. 2104264 +  -5.6   -3.1706   GCCCTGGCGGATCGC               TGCCCC GCG GCGGCA               TTCCTGACATCCATT  50 4
LQF05_RS09710 2105384 .. 2105408 +  -7.9  -3.53012   GACAGACTCGAGCGA         CAGCA-GGCG GATCGG CGCCGTGCTG          TTTGCCGCCACACAG  62 222
LQF05_RS09715 NONE
LQF05_RS09720 NONE
LQF05_RS09725 2107524 .. 2107547 + -12.4  -4.62069   GAGGCTGAGCGCGGC          GCTGCTGGGC CCCA GCCCACCAGC           TTTTTACCCTGAGGC 100 33
LQF05_RS09730 NONE
LQF05_RS09735 NONE
LQF05_RS09740 2110861 .. 2110873 +  -2.6  -3.72576   AACGAAGAACCATGC                CGGT AGAAC GCCG                TTTCCTCGACCGGCA  52 76
LQF05_RS09745 NONE
LQF05_RS09750 2113942 .. 2113960 +  -5.2  -4.41047   CTGTAAAGCCCGCCC             TAGACGTG CCG CACGTCGG             TTTTGGTTGCAGGCT  68 253
LQF05_RS09755 2114311 .. 2114344 + -11.7  -2.52464   TGCCCATCGAGCGAT     CGACACCCTGGCGGT GACC ACTGTCGGGGTGTCC      TGCGTTGAGCGCCCG  64 77
LQF05_RS09785 2122109 .. 2122121 +  -5.5  -3.86822   CCCAGCCGTGGACGT                TCTGC GGG GCGGA                TTTGTCGAACAGTTG  62 418
LQF05_RS09795 2122424 .. 2122472 +  -3.1  -2.66962   GCTGATGCGCGCCGA CCGCGGTTAGGAGGTCG-CATG CAGACC CATGACTACTGGCTGATCGCGG CCTTTTTCGTCCTCG  40 16
        kdpA NONE
        kdpB 2126214 .. 2126228 + -11.4  -3.02511   GGTTTGAGAACTGTC               GCGCCA TCG TGGCGC               TGTTAGGGAGATGAC  68 34
        kdpC 2126793 .. 2126811 +  -5.3  -2.64616   ATTGGCTGACAATCG            CTCGCCTG ATTC CAG-CGAG             TGATGTGAATGAGCG  46 4
LQF05_RS09815 NONE
LQF05_RS09820 2130444 .. 2130460 +  -3.5  -3.28791   GGTTCAAACGTGCTT              CGACCTG ATA CCGGCCG              TTCTCGCGGGCCCAT  45 288
LQF05_RS09840 2138159 .. 2138205 +  -3.6  -4.13767   TCGTGCAAGACGCTT CCGCGCGGCACG-ACC-GAGAC TGGCC GTGACAGGTTCGTGCAGCGGGG TTTTCAGGTGACAGA  59 59
LQF05_RS09845 NONE
LQF05_RS09850 2139402 .. 2139419 +  -7.7  -3.07935   GCGGGCCTGGGTGGC             GCGCAGT TCCG ACTGTGC              TTCGGTCAGTGCCGT  55 181
LQF05_RS09860 2142912 .. 2142934 + -12.7  -3.60151   CTCTCGCTCTGCTCA          CGGGCCG-CC GGTC GGACGGCCCG           TTCTCCTTTCCCGGA  82 92
LQF05_RS09865 NONE
LQF05_RS09870 2144988 .. 2145002 +  -2.1  -3.14564   GGGCGCAAGGGAAGC               TGAAG CTGGT CTTCG               TTAGTGCGGCGGTCC  43 23
LQF05_RS09875 2145511 .. 2145543 +  -8.4  -3.01712   ATGAGCGTCATTGCC     CGCTGGCGATC-AGC TGCT GCTCGGTCGTCCGCG      TGTTCGGCAGCACGC  56 37
LQF05_RS09905 NONE
LQF05_RS09910 NONE
        tolQ NONE
        tolR NONE
LQF05_RS09925 2159274 .. 2159296 +  -4.9  -4.07687   CATTCAGGATTCGTT           TCGATGAAA CAGGA TTTCAGCGA           TTTTCACGCCAGCAT  61 52
LQF05_RS09930 2161638 .. 2161655 +    -4  -4.07568   GCCAGCGTGGAGACA             GGCGCC GATGCA GGCGCG              TTTTCCGCCGCCAGG  62 425
LQF05_RS09940 2166850 .. 2166866 +  -7.9  -3.14132   GGCGCGGTGTAGGCG              GCGGTGC CGA GCAGCGC              TTCCTGCGGGCCCGG  55 431
LQF05_RS09970 2175257 .. 2175306 +  -4.8  -3.37493   CGGCGAACCCGCGCC CCTGTTCGCCGGCGCGCGCCGCC TCGAT GGCAGCGT-TGAGGGCCAGCAGG TTGGTCTGTTCGGCG  51 451
LQF05_RS10020 2185477 .. 2185491 +  -5.6  -2.93089   AATAGCGCGCCTGCC               TGGAGC AAG GCGCCA               TCCTTTAACGTAGTC  48 60
        hemH 2186975 .. 2186985 +  -2.4   -2.8085   CTTCGGGCATGTTGT                 CCAG CAG CAGG                 GTTTCGGTCAGTTCC  40 457
LQF05_RS10070 NONE
        pqqF 2197561 .. 2197589 + -11.8  -3.70902   TTCACCCCAGTCATC       GCAGGCGCGACGGC TGG GCCGT-GCGC-TGC       TTTGGGTGTACGACC  80 74
LQF05_RS10080 2199078 .. 2199101 + -17.4  -4.11216   CGCTGTAACCGCAAA          GGCCGGCTCC CTCA GGGGCCGGCC           TTTTCGCCATCAGCG 100 146
LQF05_RS10085 NONE
LQF05_RS10090 2202983 .. 2203022 + -18.6  -2.52896   ATGTGCCATATGCTC  GAGCACGGCAGCGCGGGCT AGA GGCCTGCGCTGCC-TGCGC  TGCCTTCGCCGCTGG  85 5
LQF05_RS10125 2208017 .. 2208057 +  -6.7  -3.14132   ATTGACCGCCCAAAC  GAAAACACCCTGCGAAAGC GTT GCCTTCGCAGGGTGTCGGA  TTGCTCGCCGAGGCG  54 51
LQF05_RS10135 2208986 .. 2209017 + -16.7  -3.89346   TCCGCCATCTGAAAA      C-CTGAAGGCCCCG TATTT CGGGGCCTTCAGCG      TTTCTGCGGTACGGA 100 34
LQF05_RS10140 2209696 .. 2209708 +  -7.7   -2.5655   AGCAGCAAGGCCAGT                GATCG CGC CGATC                CTTCATCTGCGTGCG  50 192
LQF05_RS10160 2213921 .. 2213953 + -10.5  -2.57944   GATCCGGGCGAGGAT      CTCGCGCTTGAGCTC AGT GAATTCCGGCGCGAG      CTTCATGTCCTGGTG  58 110
LQF05_RS10260 2237493 .. 2237506 +  -3.7  -3.65351   GCGTTCGACCTCATC               CAGCC CGCG GGCGG                TTTCGATACGGGTAC  53 139
LQF05_RS10290 2244052 .. 2244073 +  -9.3  -2.52896   CTTGCTTTGAGGCGT           GGGCGCAGC TACT GTCGCGCCC            TCGATTGGAGCCTCA  56 31
LQF05_RS10295 NONE
LQF05_RS10300 2245430 .. 2245448 + -14.6  -5.46698   CGCGGGCATAAAAAA             GCCGACCT TGA AGGTCGGC             TTTTTTGCTTTTACA 100 50
LQF05_RS10310 2246412 .. 2246427 + -11.8  -5.84381   AGAGCCATAAAAAAA              CGCCGG GAGA CCGGCG               TTTTTTTCTTCCTAG 100 31
LQF05_RS10320 2248878 .. 2248891 +  -5.9  -3.75332   ATAAGTGTTGCGGCA               GGCGC AGTG GTGCC                TTTGCCTTGAGGGAT  60 169
        cysB 2249949 .. 2249992 +  -6.6  -3.45945   TCTACCGCATGAGTG TGCGGTCAGCTC-TTGGCGAT CAG ATTGCCGGCGTGCAGCCCGCA TTCCTTGTGGGTGGC  58 89
        thrH 2251690 .. 2251701 +  -4.4  -3.55563   GGGTACGGATGGCGA                TGGA GCTG TCCA                 TTTCCCCCCTGACAT  51 218
LQF05_RS10360 NONE
        prpB 2257873 .. 2257900 + -14.1  -3.63266   AAGAGCTGACGAGCA        GGTCCCGCCGG GATTTG CCAGCGGGACC         TTTGCGATCCATTTT  88 32
        prpC 2259104 .. 2259116 + -10.5  -3.14881   GATCGGGATGGGGAG                CCCGC CGT GCGGG                TTCCTCCAGGCCTTG  65 39
        acnD 2261773 .. 2261830 + -12.7  -2.97029   CGGCCAGGCCTGAGG CACGCCAGTTCCGCACATGCTCTGTGTA TCG TTCGCAGAGCGTGTGCGCAGC-GGCGAC ATTTCATTCCTGCGC  70 28
        prpF 2263137 .. 2263153 +  -9.4  -5.24796   CCTTGAACGCAAAAA              GTCCGC ACCAA GCGGAC              TTTTTGTTGTCTAGC 100 90
        ppsA 2266542 .. 2266557 + -11.8  -4.61873   GCGGTAGATCGAAAA              CGGGGC GTCA GCCCCG               TTTTCATTTGTGCCG  95 46
        rraA 2267193 .. 2267209 + -15.1   -4.2828   CGTCATCTGTTCCGA              GCCCGGC TTC GCCGGGC              TTTTCATGAGTGACG 100 64
LQF05_RS10400 2268284 .. 2268295 +  -2.2  -2.52676   ATACTTTTGCGAGGT                TTGC ATGC GCGA                 TCCCTTCGAAGAATC  37 78
LQF05_RS10405 NONE
LQF05_RS10410 2269393 .. 2269414 +  -4.3  -2.70979   ACGTCGCCTTTTTTC           CGGTTTCCA TGAA TGGCGGCCG            TGACTTTGATTGCCG  43 61
        sigX NONE
LQF05_RS10420 2271154 .. 2271171 +  -9.8  -4.90778   CTTCAAGCTCGAAAA             GCCCGG CATAGA CCGGGC              TTTTCTTTGCCTGCA 100 55
LQF05_RS10430 2274848 .. 2274871 + -12.5  -3.91144   CTGCGCATCTGAGAA          CGAAAGCCC GCTGCA GGGCTTTCG           TTTCTACGGTATCAA  86 29
LQF05_RS10440 2276600 .. 2276627 +  -4.8  -3.65351   TCGATCCCAGTCGCC        TAGCACGATCCGC TTG GCGGGTTG-GCCA        TTTACCTCGAGGTCA  55 100
LQF05_RS10455 NONE
        cysS 2281077 .. 2281118 + -22.5  -2.72463   AGCCGAATAGTCGAA TACAAACAAGAACGGCGCC CAAG GGCGCCGTTCTTGTTTGCG  TCGTTCCCGATCAGT 100 31
LQF05_RS10470 2282319 .. 2282332 +  -2.3  -3.59262   CGCAGGTTCGAGTCC               TGCCG GGTG CGCCA                TTTCGGGCTCTGGCA  49 12
LQF05_RS10475 2282454 .. 2282472 +   -16  -4.54727   CCATATTCCAGAGAA             CGCCAGGC GCT GCCTGGCG             TTTTCGTTTAAGCCC 100 38
LQF05_RS10480 2282585 .. 2282616 + -10.9  -3.88787   CCGCACCATGTAACA      AGCTGAAAGCCCCG AATTC CGGGGCTTTC-GCG      TTTCTGGCGATGTGA  82 33
LQF05_RS10485 NONE
LQF05_RS10490 2284443 .. 2284457 +  -8.5  -3.64198   CTTGCCCATTCTGGG               GCCGG AACGC CCGGC               TTATGTCTGTGCAAC  64 157
         tig 2285821 .. 2285847 + -15.3  -3.64716   ATTCGAGTGCACAAA         CATAAGCCAGC CTCGT GCTGGCTTATG         TCTTTTGAGGCATGA  90 52
        clpP 2286551 .. 2286574 +   -11  -3.24381   CGATATGTGGCTGTT          CCGTGGGCTT GAAA AAGCCCACGA           TTGCCTTCATCTTGT  69 54
        clpX 2287906 .. 2287929 + -16.8  -3.40597   TGAGGCGTGATCGAA          CAAAGGGGCC TTCG GGCCCCTTTG           TATTTGGCTCGCCGC  93 31
         lon 2290455 .. 2290466 +  -2.2  -3.74519   CACGTTGACACACTT                CAGG TGCC CTTG                 TTTAATCGGCCTCTT  52 51
        hupB 2290954 .. 2290973 + -13.6  -4.77775   CAAAGGCTCCGAGAA            GGCGCATC CCTG GATGCGCC             TTTCTTTTATCCGGT 100 147
LQF05_RS10520 2292938 .. 2292970 + -23.6  -3.85698   CGTTGCCAGCACCCA      CGACAACGCCCCGA CTGGT TCGGGGCGTTGTCG      TTTCTGCCGGGGAAG 100 69
LQF05_RS10555 2298974 .. 2298999 + -13.3  -4.72007   CTTCTGATGAGGGCC         CCGGCGCGTGTG CTC CA-GCGCGCCGG         TTTATTTTGCTACGC 100 34
        pqqA 2300584 .. 2300603 + -16.4  -4.19735   ACCGTTGATCGATCA            GCCCCGGC TCCG GCCGGGGC             TTTGCTTTTGGGGGC 100 30
        pqqB NONE
        pqqC NONE
        pqqD NONE
        pqqE NONE
LQF05_RS10590 2305775 .. 2305811 + -12.9  -3.54408   GCTGCTGTAGCGCTT    TCCGCCGGACGGATGGC GCC GCCAGCCGTTAGGCGCA    TTGCTTTAACTGAGC  79 31
LQF05_RS10595 NONE
LQF05_RS10600 NONE
LQF05_RS10605 NONE
LQF05_RS10610 NONE
LQF05_RS10615 NONE
LQF05_RS10620 2315517 .. 2315530 +  -4.5  -2.83522   CTCGTCGTCGGAACG               CTCGC TACG GTGAG                ATTTGATCAGCCGCT  43 437
        uvrY NONE
        uvrC NONE
        pgsA 2319094 .. 2319105 +  -2.2  -3.70149   TTTTTTAATCAAAGG                GTTG ACGG CAGC                 TTTCGATCGTATAGA  49 45
LQF05_RS10645 2319232 .. 2319254 +   -12  -2.79823   CCAGTTTGTAAGATC           GCGCCGCA GAAATCA TGCGGCGC           CTTCGTTTTGAGGCC  65 38
LQF05_RS10650 2319343 .. 2319380 + -18.7  -4.18018   CATCGGCCTCCATAT   TGAAGAGCCCCAAGCAA TTCG TTGCTTGGGGCTTTTTA    TTTTGCGTCCCAGAG 100 28
LQF05_RS10655 2320185 .. 2320209 + -13.5   -3.0464   AGCTGATATTCCAGG          CCGAGGCGACG TGC CGCCGCTTCGG          TATTGGCAATGAGTT  72 476
LQF05_RS10685 NONE
        arsH NONE
LQF05_RS10695 2325769 .. 2325783 +  -2.7  -2.83164   TGGATCGAACGCTTC               GGCGC ATGAC GGGCC               TCTCATGCTGAATAC  39 17
LQF05_RS10700 2326095 .. 2326107 +  -3.3  -2.95476   TGGCGATCATCATGT                TCGCG CCG CGCAA                TCTCTGATCCATCAT  42 6
LQF05_RS10705 NONE
        arsJ 2328550 .. 2328563 +  -5.9  -2.72344   CCGAGTAATCATCGG               CGTCG TAGC CGGCG                TACTTGACGGTGGCC  46 119
        galU 2340420 .. 2340449 + -15.7  -4.36914   TAAGGCGTTCTGATC       CAGTCGGGCCACC TCAG GGTGGCCCGATCG        TTTTATGGCGCGGGC 100 28
        gorA 2342648 .. 2342669 +  -4.3  -4.07568   CTGCGCACCGATCAG           TCGCTGCGA ATGC TCGCCACGA            TTTTCCAGAACGAAA  62 369
LQF05_RS10790 NONE
LQF05_RS10795 2348325 .. 2348338 +  -3.1  -4.65895   GAATTTTGACGAGAC               GCTAT CGTC ATGGC                TTTTTCGGTGCAGCC  70 69
LQF05_RS10800 2349578 .. 2349588 +  -5.4  -3.14888   CCAACGCAACGCGCA                 TCCA TTT TGGA                 ATTTTGGATGTCATT  50 270
LQF05_RS10825 2352903 .. 2352940 +  -8.4  -4.08706   GGTTTGTCGATCTAG   TCGTCTCGGCCAGC TTTGCTTTTT GCTGGCGGAGCCGA    TTTATCTACTGCCAC  71 110
LQF05_RS10835 NONE
LQF05_RS10840 NONE
LQF05_RS10845 2357191 .. 2357212 +  -2.3  -3.16904   CTCCAACGGTAGTGG           TACTGGCATG ATA CAAGC-AGTA           GTTTTCGATGTGTTT  43 74
LQF05_RS10850 2357840 .. 2357870 +  -3.8  -2.52676   GGCTAAAGCTGCGTC       GCCAGTTCTAGCTG TCG CCGCTAGACCCGGA       TGGCTTACAGGCATG  40 35
LQF05_RS10885 NONE
LQF05_RS10890 NONE
LQF05_RS10895 2369674 .. 2369694 +   -14  -4.89852   TTTTCTCCCAACGTA            GGCCAGGC TTGAT GCCTGGCC            TTTTTATGAATATCC 100 47
LQF05_RS10905 2371913 .. 2371931 +  -7.4  -3.21593   GCAAGATCAGAACAG             CGTCCG CTCATGT CGGACG             TCTTCTGAAGCCATA  54 507
LQF05_RS10925 NONE
LQF05_RS10930 NONE
LQF05_RS10935 NONE
LQF05_RS10940 NONE
LQF05_RS10945 2381184 .. 2381220 +    -3  -4.56597   GGGCCTGAACGATTG   TTGCG-CGCTCGGTAAAG GTG TTTCACCG-GCGGCGCGG   TTTTTCCGGCCCAGC  66 33
LQF05_RS10950 2381969 .. 2381987 +  -8.8  -3.09327   TGGTCGATATTGACG             CGGTTGTC GTT GCCAACCG             TATTGCCTCGAATGA  57 302
LQF05_RS10960 2384666 .. 2384678 +  -5.5  -2.91276   AACCGCTGGCCGCCC                GCTCG CTT TGAGC                CTTTCTGCAGGGGGC  48 15
LQF05_RS10965 2385835 .. 2385867 +  -6.3  -3.52093   CAGCCCTAGCGCCGG     GC-CTG-TGCCGCCT GCTGA AGGCGGCTTCAGCGC     TTGTCCTTGCGGTGT  55 32
LQF05_RS10985 2391479 .. 2391489 +  -2.4  -3.62096   CGGCTCCCGACGGAC                 AGGC ACG GCCG                 TTTGCGGTCCTGCAA  49 335
LQF05_RS11000 2393519 .. 2393540 +  -5.1  -3.64703   TTGCGAATCTCGACG           CGGTCGCCGT CGA ACTGC-ACCG           TTTCGCTCACCACCA  55 129
        glgA NONE
        treZ NONE
        malQ NONE
LQF05_RS11025 NONE
LQF05_RS11030 2402823 .. 2402836 +  -9.5  -3.14522   GTCCAATGACCGTCC               GCGCC GACA GGCGC                TTCGCTGTGCCTTCC  61 74
        glgX 2405279 .. 2405290 +  -2.2  -4.21462   GTTCTGCTCGTCGCC                GGCA GCCT TGTC                 TTTTCCGTGATGGAT  60 280
LQF05_RS11040 2406172 .. 2406186 +  -4.2  -2.79831   CAGTGATGAACTAGA               GCATGC GCT GCATGA               TGTCGTCGCGCTTCA  43 35
LQF05_RS11055 2409069 .. 2409102 +  -2.3  -3.54488   CGAGTATTCCAGTAC     CCCGCG-GAGCCTTCG ATC CGAACATTCGCGCCGG     TCTTCTTTCCCGCCG  47 208
LQF05_RS11060 NONE
LQF05_RS11065 NONE
LQF05_RS11070 NONE
        clsB NONE
LQF05_RS11080 2414508 .. 2414533 + -16.1  -3.73647   ATTCACCTAAAAAAA         CGCCGCTCAGG TTGC CCCGAGCGGCG          TTCTTCATCGCTGCA  95 120
LQF05_RS11100 2423210 .. 2423224 +  -4.2  -3.06492   AGTCCGCGGGTATCG               GCGC TGCCGGC GCGC               TGTTCCAGTACATCC  45 519
LQF05_RS11145 2433766 .. 2433779 +  -4.5  -4.58395   GCTCGATTGGAGAAA               TGACC CCGG GGTCG                TTTTTCCACCCTGCC  73 143
LQF05_RS11150 NONE
LQF05_RS11155 NONE
LQF05_RS11160 2439855 .. 2439883 + -10.3  -5.42259   CTGGTCGATCACTTC       TGCCCCG-GGTG CTGCAA CGCCGCGGGGCA        TTTTTTTGCCGCTCG 100 67
LQF05_RS11165 NONE
LQF05_RS11170 2441273 .. 2441285 +  -6.9  -2.64616   TCCTGTCACTGCAGC                GGCTG CGC CGGCC                TCCTCTGCCTCGGCG  49 104
LQF05_RS11175 2442535 .. 2442554 + -12.1  -5.37043   ATCCAGATGAACAAA            GCCCCGC CAGCTA GCGGGGC             TTTTTTGTGTGGCCT 100 46
LQF05_RS11200 2453320 .. 2453341 + -17.3   -4.3467   TCGCACAAACGAAAA           GGCCGCTGC AGAT GCAGCGGCC            TTTTGCTGTGCGCGT 100 86
        xthA 2464567 .. 2464581 +  -5.6  -2.86124   CCATCGATACCACGC               CGGGCG CGC CGTCTG               TCATCTTTCGGTAAC  48 44
LQF05_RS11240 2466055 .. 2466072 +  -4.7  -3.59979   CCACCGGCGTACTGT             CTCGGTG CCGG CGCCGCG              TTTAAGCTCGGCGGA  54 67
LQF05_RS11245 2467035 .. 2467046 +  -2.2  -4.15565   CTTACCGATACGAAA                TTGC CTGA GCGA                 TTTTGCCATCGTCGC  60 18
LQF05_RS11250 2468184 .. 2468194 +  -2.4  -3.87815   CGTATCGGTAGAAGT                 GCAG TCA CGGC                 TTTGTCGCGCTGCCA  54 195
LQF05_RS11255 NONE
LQF05_RS11260 NONE
LQF05_RS11265 NONE
        ugpC 2472692 .. 2472702 +  -2.4  -3.08314   CGTAAAGGCAGCGAT                 CCCG CCC CCGG                 CTTTTCCACATTCAA  41 86
LQF05_RS11275 NONE
        xylB 2475787 .. 2475813 + -17.4  -3.81951   ACGGTCATAAAAAAA         GGCAAAGCCACG GTG TGTGGCTTTGCC         TTTGGTCCTCTCCCC 100 65
LQF05_RS11290 2478387 .. 2478403 +  -4.3  -3.61398   CACGAAACAGCGCAC              CGAGGGC CAG GTCGTCG              TTGTTGAAGAACACC  53 288
LQF05_RS11315 2483569 .. 2483580 +  -7.2  -3.02144   TCGATGAAGTCCAGC                GCCG AGAA CGGC                 TGTTCGCAAAGGTCG  50 377
LQF05_RS11330 NONE
LQF05_RS11335 2487980 .. 2488024 +  -4.2  -3.21924   TGGTCAGCAGGCTGC CGCTGTGGCGCGGCACGTT CAGCAGGC GAC-TGCCGCGCGCCAGGG TGTTGTCGCGGGTCA  47 334
LQF05_RS11345 2491746 .. 2491763 + -14.1  -4.72863   CCCCCCCAAAAAAAA             GCCCCGC ACTA GCGGGGC              TTTTCATTTCTTTGA 100 53
LQF05_RS11355 2494504 .. 2494550 + -12.3  -2.62184   AGCCAGTTCCGCGTC TGACCGCCTCTGCGGCTCGCCCA GCG TGGGCGAGCCGCAC-GGCAC-CA TCCTCTGGCACACCC  68 23
LQF05_RS11360 2495197 .. 2495220 + -12.4  -5.14563   GGCGGCACGAATCAA          GGCCTGCAGC CAAC GCTCCAGGCC           TTTTTTCATGCCCAG 100 46
LQF05_RS11365 2495656 .. 2495672 + -10.8  -3.28712   TCGAATGCAATGCCT              GCCGGC CATGC GCCGGC              TTCTCGGAAGGACGA  68 81
LQF05_RS11370 2496400 .. 2496418 +  -5.9  -2.56596   GATGCACGGTACGAA             CCGCCAG TGCTC CTGCCGG             TCAGTTGATAGAGGC  46 39
LQF05_RS11375 NONE
LQF05_RS11380 2498165 .. 2498182 +  -4.1  -3.18681   ACCGCGTCGCCCACC             TGATGCC CGTA GGTATCG              TTGATCGACTTGAAA  47 381
        metH 2506766 .. 2506789 +   -16  -3.05384   GACAACTGATCTCGA          CGCGGGCGTC TCCC GACGCCTGCG           TTCGATCCACGGAGC  83 32
LQF05_RS11410 NONE
        pnuC NONE
LQF05_RS11425 2509589 .. 2509617 +  -5.2  -3.06183   TGCTTGGACACGAGC       GCTGCTG-GATGG CTGA CCGCCTCAGCGGC        TTGGCTGCCCGTCCC  46 10
LQF05_RS11440 NONE
LQF05_RS11445 2513624 .. 2513636 +  -6.9  -3.25823   GAGCGCTGTAGCAGA                CGCCG TTT CGGTG                TTCATCTCAGCAAGG  54 74
LQF05_RS11450 NONE
LQF05_RS11455 2515597 .. 2515608 +  -2.2  -3.89346   TCTGACCTTCCCGAG                CTTC TACA GGAG                 TTTGTGAAATGAACG  54 167
LQF05_RS11460 NONE
LQF05_RS11465 2516480 .. 2516495 +  -3.2   -3.1552   CTCGTGCTTTATCTG              GCGG GCCTGTAG CCGC               TATTGGTGGCTGACC  45 14
LQF05_RS11470 NONE
LQF05_RS11475 2518993 .. 2519010 + -14.1  -4.42238   GCCAGCAAGTGAAAA             GCCCGCC AATT GGCGGGC              TTTTCATTGGCGTCA 100 48
LQF05_RS11490 NONE
LQF05_RS11495 2522552 .. 2522569 +  -9.9  -5.71712   GAGAGACACCAAAAA             CCGAAGT CCCG ACTTCGG              TTTTTTTATGTCCAA 100 57
LQF05_RS11500 NONE
LQF05_RS11505 2524641 .. 2524659 + -12.4  -4.50976   CAGCCAGATGAAAAA             GGGAGCCG CAA TGGCTCCC             TTTTGTCATCTGCAC 100 47
LQF05_RS11515 2526411 .. 2526440 +  -4.9  -3.04144   GCATCCTCGATCTCC       T-CGGGCTGCGGGA CGA TCTCGCCGCCGGCA       TATTCGGCGTGGAAC  46 129
        gloB 2535080 .. 2535096 +  -2.1  -3.86346   GTTTTCGCGGCTTTG              CGTGCCT GGA AGGATCG              TTTCTGACAAGGTCG  54 2
LQF05_RS11560 2536969 .. 2536982 +  -3.7  -3.41878   GTAGCGGCTGAGTCA               CCAGG TCCG CCAGG                TTGTAGCTTGCCGGA  49 237
LQF05_RS11570 NONE
LQF05_RS11575 NONE
LQF05_RS11580 NONE
LQF05_RS11585 NONE
LQF05_RS11590 NONE
        fabI 2546663 .. 2546693 + -17.7  -3.85817   CCCGCCTACGTAAAG      CACCGAACCCCGCC TACT GGCGGGGTTC-GTG       TTTCTAGGGCGGCAT 100 48
LQF05_RS11605 2548705 .. 2548725 + -10.3  -3.53012   CGCAGAAACACGAAA            CCCCGGCCG TGA TGACCGGGG            TTTCGCACACGGAGC  70 56
LQF05_RS11615 2552082 .. 2552105 + -12.4  -3.14344   TGAAACTCCTCACTG          GTCGACGCGT TCGA GCGCGTCGGC           TTCGTAGCGCGGATA  74 38
        exaA NONE
LQF05_RS11645 NONE
LQF05_RS11650 NONE
LQF05_RS11655 2561102 .. 2561124 + -14.8  -3.29461   ACGGGTTCTCTGCCA           GCGCTCCGCC GGT GGCGTAGCGC           TTGTCGAAGAGGTTG  83 263
LQF05_RS11680 2568556 .. 2568579 + -18.2  -2.83409   CTAGTCGATCAAGGA          GAAGCGGCGC CCTT GCGCCGCTTC           TCTACTACCTTGGTA  86 37
LQF05_RS11685 NONE
LQF05_RS11690 NONE
LQF05_RS11695 NONE
LQF05_RS11700 NONE
LQF05_RS11705 2572975 .. 2572987 +  -3.3  -2.72144   TGGTACCGGTTCTCC                CCTCC ATC GTAGG                ATTTCAAAGACGTGG  41 55
LQF05_RS11710 NONE
LQF05_RS11715 2574527 .. 2574543 +  -7.9  -3.53224   GGTGGTACCCTGCTG              CACCAGC GCG GCGGGTG              TTTCCGCCGACCGTC  60 221
        trxB NONE
         aat 2583951 .. 2583961 +  -3.2  -3.35467   ACCGCGGTAAGCTGG                 CCTA CAC TGGG                 TTCATGATTTCTGAG  47 44
LQF05_RS11760 2584737 .. 2584762 +  -6.8  -3.51924   ACAATGCTTGCCGCT         TTTGCCCGTG CATCTA CGCGGGCCAA          TTATCTGGATACCGA  58 70
        infA 2585028 .. 2585044 + -13.7  -5.63517   GCCGCGAGAAAAAAC              GCCCGGT CTT ACCGGGC              TTTTTTGTTTGCGCC 100 45
        cspD 2588303 .. 2588322 + -13.6  -4.59853   GAGCAAACAAAAAAA            GGCCGATC AATC GATCGGCC             TTTTTACCCACTTGC 100 51
LQF05_RS11790 2592200 .. 2592232 + -15.6  -3.53012   TGCACCTGAGCGTCA      ATACGAACCCCGGC CTTGC GCCGGGGTTCGTGC      TTTCAGCAGCCCAGC  93 44
LQF05_RS11795 NONE
        mnmA NONE
        hflD 2594567 .. 2594588 +  -5.8  -3.34534   GATAACCGGGGAGAA           TGGACCGG GATGTG CCGGTACA            TTCGTGTATAATCTG  52 36
        purB 2596030 .. 2596048 + -17.4  -5.46706   GATCCCATGCCTGCA             CGCCCGGC TGT GCCGGGCG             TTTTTATTTTCAGCT 100 43
LQF05_RS11815 NONE
LQF05_RS11820 NONE
LQF05_RS11825 NONE
LQF05_RS11830 2599479 .. 2599491 +  -3.3  -3.36073   CCCTTGGTTCAATCC                TCGTC CCG GTCGA                TATTTCGACGCTCTG  47 388
LQF05_RS11835 2601232 .. 2601251 + -12.8  -5.75342   TGCGGTGTGAAAAAA            GCCCTGGC GTGA GCCGGGGC             TTTTTTTTGCGACGG 100 65
LQF05_RS11840 2603421 .. 2603433 +  -6.2  -3.06162   TGTCGGCAATCATTG                GCCC GGTGG GGGC                TCTTCAGGTGAAGTG  49 75
LQF05_RS11885 2613994 .. 2614007 +  -2.3  -3.67173   GCAACATGAGCGATT               GCAGC TCAA GCTTC                TTCTTCAAGCTTTAT  49 111
LQF05_RS11890 NONE
        mupP NONE
LQF05_RS11900 2616413 .. 2616429 +  -2.1  -4.18018   CCGGACGCTCGGCGA              CCGGCGT ACC ACGCGGC              TTTTCGCTGCCGCGC  58 207
LQF05_RS11930 2622393 .. 2622410 +  -2.6  -3.81488   TCTGCACGCGGCATT             GGCTGG GGTAGA CTGGCC              TTCTGTTTGGAGGCC  52 48
LQF05_RS11935 NONE
        folE 2623642 .. 2623664 +  -6.9  -4.78149   AAGTAGCACAGAGAA           GACAGGGTC TTCAC GGCCCTGCC           TTTTTCACTTCTCAA  85 35
LQF05_RS11955 2626069 .. 2626086 + -12.7  -4.72272   CGCAGGCACAAAAAA             GGGCGAC CGAA GTCGCCC              TTTTTCATGAAGAAC 100 79
        imuA NONE
LQF05_RS12005 NONE
LQF05_RS12010 2644052 .. 2644081 +  -9.2  -4.60797   AACAAAGCAGCGGCG       GCTAGCGGCGCT CCCAAC AGCGCTGCCGGC        TTTTATATATGAGCG  85 139
LQF05_RS12015 2646161 .. 2646183 +  -6.9   -2.8805   ATGTAGTAGGTTGCC           CCGGCCTGC TGGCT GTAGGCAGG           TCTATACCGGGTCGT  51 507
LQF05_RS12025 2647826 .. 2647838 +  -2.6  -2.59837   TATCCATGGGCACTG                GGTG CATAA CGCC                ATATTCCTTTAGCGT  38 17
        tcyJ NONE
        tcyL NONE
        yecC 2650190 .. 2650206 +  -5.8  -2.86181   CCTTCGCCGCTTTGC              GATCGG CTTGC CCGGTC              TGGTTCATCTTCTGC  48 59
LQF05_RS12070 NONE
LQF05_RS12075 2661560 .. 2661570 +  -2.4  -2.95007   GCTCCGAAATCATTT                 GCCG AAT CAGC                 TGCTTGTATTGGGTG  41 415
LQF05_RS12130 2670656 .. 2670703 +  -9.1  -3.53444   GGGCACGACGGTGGC GGAGCGCATTGCCGAGCCGCCTGC TCT GC-GGCAGC-CGGCAAAG-GCGCC TTTAGACGGCCATCA  65 53
LQF05_RS12145 2672905 .. 2672926 +  -8.7  -2.78018   TGTTGCCAGAGCCAG           CACCGGCAGG CCG CC-GTCGGTG           TAGTTCATGCCAAAT  53 426
        mobA 2674425 .. 2674436 +  -4.4  -3.14132   GTAGCGCGCTTCGTC                CGAT GGTT ATCG                 TTACTCGCAGAAGGA  48 37
LQF05_RS12160 2674783 .. 2674799 +  -3.7   -4.9792   AATATCCGGCGTAAC              GTCTTGT GCG ACAAAAC              TTTTTCTGTAGAATG  77 127
LQF05_RS12165 2674943 .. 2674958 +  -7.5  -5.65177   GCAGACCATAAAAAA              CCGGC CAACGA GCCGG               TTTTTTTATGCATGT 100 66
LQF05_RS12175 2677002 .. 2677025 + -15.4  -5.26247   CGTGCTGTAGAACAA          GAAAACCCGC TTCG GCGGGTTTTC           TTTTGTTTGTTTTCC 100 60
LQF05_RS12180 NONE
LQF05_RS12185 NONE
LQF05_RS12190 2678312 .. 2678322 +  -2.4  -3.27475   GTTGCACTAACCGCT                 GGAG CAA CACC                 TGTTGTACTGGCAGC  44 31
LQF05_RS12195 NONE
LQF05_RS12200 2680884 .. 2680899 +  -3.2  -4.11216   ACGAGCAGACTACTT              CTCGGT CCTG ATCGGG               TTTTCCGGATACCAC  59 15
        dacB 2682996 .. 2683020 + -20.1  -2.53213   GCAGAACCGTCATCA          CCGTGCCTGGA GTT TCCAGGCACGG          TGGATTCGCGGATTG  95 76
LQF05_RS12220 2686224 .. 2686253 +  -7.2  -2.63479   TGTCCGGCGCGATCT       TG-ATGGCCAGCG GTACA CGCTTGCCATGCA       TGATCTCCAGATCTT  47 503
LQF05_RS12235 2688317 .. 2688338 + -17.3  -5.88197   AGCTCAAATAAAAAA           GCGCACCGC TGTC GCGGTGCGC            TTTTTTTGTGTTTGA 100 67
LQF05_RS12245 NONE
LQF05_RS12250 NONE
LQF05_RS12255 NONE
LQF05_RS12260 2696866 .. 2696903 +  -2.6   -2.7185   AACGCCTGGCATGGC   GACGGGAGCAGCGGC GATGAGCGA GCTGCTGC-CCCACC   TGCTTCGCCCCTGGT  39 6
LQF05_RS12265 NONE
LQF05_RS12270 2700303 .. 2700315 +  -3.4  -3.01712   TGGCTTGCTTCAGGG                TTGG CATAA CCAA                TCTTGCGCACCGCGC  43 112
LQF05_RS12275 NONE
LQF05_RS12280 2702371 .. 2702409 + -12.5   -5.4505   GCCGGCACAGACAAA  GGCGTCCTCGACTGCATG TGCG CATGCGGTTC-GGACGCC   TTTTTTGTTGCGCGC 100 234
LQF05_RS12285 2703207 .. 2703223 +  -2.2  -3.48276   CGTGGAACCGGCCCA              GGCCAT GAGCG GTGGTC              TTCTGTAAAACGGCC  47 81
LQF05_RS12290 NONE
LQF05_RS12300 2706277 .. 2706289 +  -4.7  -2.79183   GGTTCGGCCGCCGTC                ACCGC CGC GCGGG                TCTGATGCCGATGCC  43 8
LQF05_RS12305 2708313 .. 2708328 +  -3.2  -3.81428   AGTGATGGGGGCCAG              GCGCAGC TGA GC-GTGC              TTTGCATTCATTGAT  54 309
        nirB NONE
        nirD NONE
LQF05_RS12325 NONE
        cobA 2715197 .. 2715216 + -16.4  -3.68569   TTCCACTCAAAAAAA            CCGCGGCC CAAG GGCCGCGG             TTCTTCGCTACATCC  93 79
LQF05_RS12375 NONE
        chrA 2728264 .. 2728279 +  -4.7  -3.64703   TGCTCGGCCTGACGA              GCTGA AACCGC TCAGC               TTTCCATCGCCAGCA  54 21
LQF05_RS12390 2730361 .. 2730384 +  -2.3  -3.72576   CTCGATGGGATGCAC          GCGGGCG AAATCGAAAC CGCCCTC           TTTCATCCGGCGCAG  53 293
LQF05_RS12405 2732895 .. 2732936 +  -2.8  -2.78935   TCGGCGAGGCGAAAA AGGAATCCAGCGCCGGTAG CGGCT CGACCGGCGC-GAGTGCCA TCTGCTGCGCCGTGT  41 246
LQF05_RS12445 NONE
LQF05_RS12450 2739248 .. 2739291 +  -2.3  -3.91882   ACGCATAGACCGGAC GCGCGCCCAC--CGACCACCA GTCC TGGTCGCCGCCGTCGTCGCGC TTGTCTTTCTGGTAG  55 335
LQF05_RS12525 2755134 .. 2755144 +  -4.6  -3.02144   GGATAGCGAATCCGC                 CCGG CTG CTGG                 TCTTCCACAGCCTCG  46 54
LQF05_RS12530 NONE
LQF05_RS12535 2756365 .. 2756378 +  -4.5  -2.79878   GCTTCTTCAATGGCG               CGG-CG GCA CGACCG               GTTTCCCTACATAGG  43 143
LQF05_RS12540 2756842 .. 2756887 + -18.4  -4.62069   TCCATCTGATACCCC GCCCGGCA-GCGTCCGCCCGTC ATGT GATGGGCG-AAGCGTGCCGGGC TTTTTGCCGTGGAGA 100 49
LQF05_RS12545 2758636 .. 2758671 +  -9.8  -3.09516   CTCACGCAGGGCCGC   GGCGAACAGCTCGCCA AGCTTG TGGCGGGC-GT-CGCC    TTCGATGATGAGGAA  60 394
LQF05_RS12560 2761159 .. 2761186 +  -3.4  -3.72576   CGCCCACCATGAACA        TCGCCG-CGGT ACCGATG ACCGACAGCGA        TTTCATCAGCCAGGG  54 256
LQF05_RS12575 2763363 .. 2763373 +  -2.4  -3.35679   AGGACATGCTGACCG                 GCCG CGT CCGC                 TTCTGAGTGCGACGC  44 9
LQF05_RS12580 2765075 .. 2765085 +  -2.4  -3.57144   TACCGTGTCCGGTCC                 GCAG AGC CCGC                 TTTCGAGATCGCCGA  49 72
LQF05_RS12585 2765881 .. 2765898 +    -4  -2.78395   GACACCCGCTCGCCC             GCGGCC TAGCAT GGCCAC              TGATTCGTCAAGGTT  41 48
LQF05_RS12590 2767225 .. 2767235 +  -5.4  -3.39018   TCCCGTGCATACCTC                 TGGT TCG ACCA                 TGTTTCGCCTGCTCG  52 393
LQF05_RS12600 2769411 .. 2769424 +  -3.1  -3.33261   ACATGAATCTGGGAC               GCAGCT TCT AGC-GC               TTGTCCAGATTGGCG  47 15
LQF05_RS12615 2772938 .. 2772968 +  -7.5  -2.87132   TGCCGGACGCAGGCG      ACGGCGG-CAGGCT GCGA AGCCTAACCGCCGC       TCTCTGCCAGGAGGA  51 52
LQF05_RS12620 2773657 .. 2773675 +  -6.6  -3.01712   AGAAGGTCATCGTAC             CGCTCGGG CGC CTCGAGGG             TGTTCAAGGCGGCGA  50 166
LQF05_RS12630 2775150 .. 2775169 +  -7.8  -3.70902   TACGTTGCTGCACGG            GCGCCG CTTTGTTA CGGCGC             TTTACATCTGCGACC  67 275
LQF05_RS12645 2778248 .. 2778277 + -11.5  -2.80344   GTCGTCATCGACCAG       CTCGACGCGGTCGA CCA TCGACAG-GTCGAG       GTTCTTCGGTACGAA  64 279
LQF05_RS12655 NONE
LQF05_RS12660 2781162 .. 2781193 +    -5  -3.59979   TCTAGCCTTCATGAG      CCGACGCGCCAACAG CCG CTGATCG-GCGCCGG      TTTCCGGTGGAGCCG  54 4
LQF05_RS12665 2781661 .. 2781675 +  -5.6  -3.90318   CGAATATCGCGCCGA               CCTCGG CGC CAGAGG               TTTCTGCCATGCTGC  62 46
LQF05_RS12670 2783259 .. 2783279 +  -2.4  -2.78463   GGGCATCCAGATCGC            CGCCGAAG AAGCG CTGCGCCG            TCTGCTGAAAGCCCT  38 422
LQF05_RS12690 2785726 .. 2785752 +  -3.7  -2.64155   CGAACTCATGATTGC        TGGCGAA-CGGC AGAT GCTGCTTGGCCA         TGGGTTTGAGCCGGC  41 372
LQF05_RS12705 2790406 .. 2790442 + -21.6  -3.91897   AATCGCAGTGACGCG   CAGCCGG-CCCGGACGG CACA CCGTCCGGGCCCGGCCG    TTTCTCACTCCAGCC 100 30
LQF05_RS12725 NONE
LQF05_RS12730 NONE
LQF05_RS12735 2797906 .. 2797962 +  -2.6   -3.0615   ACGCCAGCACCAATA AGTAAGTGATTCGCACGGCGGCGGGG TCAAC CCCCGTCGCCATGCCGAACGCCACCC CATTTTTTTTCGTAT  41 21
LQF05_RS12740 NONE
LQF05_RS12745 NONE
LQF05_RS12750 NONE
LQF05_RS12755 NONE
LQF05_RS12760 NONE
LQF05_RS12765 NONE
LQF05_RS12770 2805827 .. 2805843 +  -6.5  -2.64877   CGCGGTGAACCCAGC              CAGACCG AGA CGGTCTA              TCCCTTCTGTGTAAG  49 78
LQF05_RS12775 2807353 .. 2807382 + -17.3  -4.87807   GGATCGGGTAGAAAA       GCCGCAGAGTCATC ACC GATG-CTCTGCGGC       TTTTTCGTATGTTGG 100 62
LQF05_RS12790 2811635 .. 2811646 +  -7.2  -2.78596   ACACCCCAAATCACC                GGCG CGCA CGCC                 TATAATCGCGCCCTC  50 165
LQF05_RS12795 2812423 .. 2812438 +  -3.2  -3.82604   ACCTATCCTTGAGCA              CATCCC AGTC GAGATG               TTCTTCGTTGGCTCG  56 359
LQF05_RS12900 2839260 .. 2839295 +  -7.4  -3.64822   GCCCTGTCCGCCTAA    GTAGGGGCCGCGCGGGT TCA GTCCACCCGGCCCC-GC    TTTCGATAGCGCAGT  60 100
LQF05_RS12905 2840797 .. 2840815 + -11.7  -5.36441   CACAGAAACGAAAAA             GCCCAGC ATCGA GCTGGGC             TTTTTTCTGTCCACC 100 47
LQF05_RS12930 2846617 .. 2846653 +  -9.3  -3.54543   TTTGTAATTGAGAGT    TGAGCATCTTCCCCCCG TAC CGGGGTGGGGGAGTTCA    TTTCGCGCCATGCCT  66 48
LQF05_RS12935 2847890 .. 2847903 +  -2.3  -2.72344   AGTACAACGGCAACT               TCCGT GAGG ACGGC                TACTTCAACATGACC  39 362
LQF05_RS12955 NONE
LQF05_RS12960 2854530 .. 2854542 +  -3.3  -3.05384   ACCCCAGCACCGAAG                GTCTG CAC CAGTC                TTGCGTCAGGAGGGA  43 142
LQF05_RS12965 2855583 .. 2855608 +  -2.5  -3.34856   GCTTGGAATGGATCG         GAAC-CAACCTC TCG GAGGATGCGGTC         TTCAGTTTCTGGTCT  45 297
LQF05_RS12980 NONE
LQF05_RS12985 NONE
LQF05_RS12990 2860096 .. 2860120 +  -9.9  -2.63631   TCCTGGATGGATATG          GCGGTGGTCAG CGG CAGACCAACGC          TCATGTCGCCGTTGG  55 352
LQF05_RS13000 NONE
LQF05_RS13005 2863281 .. 2863293 +  -5.5  -2.87132   GTTACGACCCGGCGG                TGGCG ATC CGCTA                TGTGTGAACGCGCAC  48 6
LQF05_RS13010 2864147 .. 2864160 +  -2.4  -3.83026   ATCTCTCCGGACAGA               TACC CCCACC GGTA                TTTAATCTGAAGAGG  52 148
LQF05_RS13015 NONE
LQF05_RS13020 NONE
        sulP NONE
LQF05_RS13030 2869000 .. 2869023 + -13.9  -4.07687   CTCGATAAAAAAGAA          GAGGCCGAC ATGATC GTCGGCCTC           TTTTCAAACGCACGT  95 50
LQF05_RS13055 2871017 .. 2871032 + -10.4  -5.65513   GCAAAACGAAAAAAA              GCGACC CTTA GGTCGC               TTTTTTTGATTCCTC 100 140
LQF05_RS13070 NONE
LQF05_RS13075 2873109 .. 2873119 +  -2.4  -3.08211   CACGTCCGGTGGCCC                 AGCG AAT CGCG                 TCCTTTTCCAGCGCT  42 175
LQF05_RS13095 NONE
LQF05_RS13100 2876831 .. 2876846 +  -4.6  -2.54193   GCTGCACTCCAGCCT              TGGCGC ACAA GCGACA               TAGCTTGAAATAGTC  42 7
        htpX 2877830 .. 2877847 + -12.7  -4.66057   GACCGAGTGGTACCG             GGGCGAC GCAA GTCGCCC              TTTTCGTTTGTCTAT 100 45
LQF05_RS13110 2878580 .. 2878590 +  -3.2  -3.61715   TCCCGCCGTTGCAGC                 CGGT AAA ACTG                 TTCTTGCAGGCGCTG  51 67
LQF05_RS13190 NONE
LQF05_RS13195 2893812 .. 2893850 +  -6.5  -3.12668   CGTGTAGCCCCAGCT  GACAGCCATGCGCGCCGC TTCC GCGCTGCGCG-GGCAGAC   TTCGCTGTCGCAGTA  51 129
        sodC 2909452 .. 2909486 +    -7  -2.52516   GCACCGCCCTTGTCG     CCGTCGTATTTCAGCG CGA CGGCGAAGTGCGTCGG     GTTGGTGATCACCAC  47 357
LQF05_RS13370 2926311 .. 2926321 +  -8.2  -4.56597   GCCTCAGGGCGGCCG                 GCGC AGC GCGC                 TTTTTAGGCCGGGCG  79 261
LQF05_RS13390 2927694 .. 2927718 +  -7.7  -3.49475   GTCAGGCAAATGGAG          CGAGGCGCCTG ACG CAGGCTTCGCG          TTCTCTACCGATCGC  62 14
LQF05_RS13405 2931183 .. 2931195 +  -6.9  -3.72576   ATCGACCTGCGTTCG                CTGCC ATG GGCGG                TTTCATAGCCGAGCC  63 61
LQF05_RS13410 NONE
LQF05_RS13415 2934626 .. 2934640 +   -10  -2.50816   TATGGTTGAGGTCGG               TGGCCA GTC TGGCCA               GTTCATCGCTGGCGA  58 165
LQF05_RS13425 2937568 .. 2937593 +  -6.7  -4.28994   CGAGAAAGCGCTCCA         GTTCCTGCGTG CAAT CTCGCAGGCGC          TTTTCATGGCTGATC  72 487
LQF05_RS13435 NONE
LQF05_RS13440 2941190 .. 2941208 +  -4.4  -3.53012   GAGATAGGCCCGCGC             GCGTCGCT ATA ATCGCCGC             TTTGCCGCCAAGCGC  52 60
LQF05_RS13445 2942058 .. 2942078 +    -2  -2.72043   GTTCCGTGACCAGCC            TGAAAAAT GTTCG ATTTTTTA            CTTTGACAGCGGCTT  39 86
LQF05_RS13450 NONE
        glpK 2944595 .. 2944631 + -29.5  -3.03159   ACTGAGAAGCCCACC    CCGCGCCTGCCCGCGAC CGG GTCGCAGGCAGGCGCGG    TATTGCGCGAATTCG 100 36
LQF05_RS13460 2945564 .. 2945593 +  -2.7  -3.22653   GTCCAGGCCGCTAAC       GGCGGC-CGGCTAA GAT TCACCCGCCCCGCC       TATTGTCCGCATGCT  43 114
        glpD 2947449 .. 2947477 + -14.6  -2.67515   GGCCTGAGCGCAAGA        ACACGAGCCTGC CTTAC GCAGGCTCGTGC        TGATCTGGTACTGAC  76 34
LQF05_RS13470 NONE
LQF05_RS13475 NONE
LQF05_RS13480 2950093 .. 2950109 +  -2.2  -3.04517   TGACTCGCAGGGCAA              TTGCGG TAGGC TCGCAG              CTTTTCCACAGGAGT  41 86
LQF05_RS13485 2950545 .. 2950559 +  -8.6  -2.74192   GCGCCTTGAGCCCGT               TCATGC TCT GCATGA               TGGTATTGCCCGATG  53 157
LQF05_RS13495 2952303 .. 2952313 +  -2.4  -4.37763   GTCAATGGAATCGCC                 CGCG TTT CGCC                 TGTTTTTTTGGCTCG  63 111
LQF05_RS13500 NONE
LQF05_RS13505 2953313 .. 2953334 + -15.9  -3.14881   GCACTGATGCGCGAA           GGGCCTTCC GCTG GGAAGGCCC            TTCATCGGGGGCTTA  85 34
LQF05_RS13525 2956198 .. 2956219 + -11.5  -2.57067   GCTTGGTCAATGGGC           CGGACGGCG TTAG CGCGGTCCG            TGACTTGCCTATTCA  64 339
LQF05_RS13535 2957645 .. 2957658 +  -9.5  -3.28712   AAACCGCCACCAGCC               CGGCC AGCG GGCCG                TTGTGCAGGAAGCCC  63 453
LQF05_RS13550 NONE
LQF05_RS13555 2961271 .. 2961287 +  -3.5  -3.53012   TTCCCGTTTCGTACG              CGGCCAC GCC GGAGCCG              TTTGGCGCAGCGACG  49 54
LQF05_RS13560 2961630 .. 2961649 + -16.4  -4.07568   GCCTGATCGCCACAA            CGCCCGGC TGAT GCCGGGCG             TTTTCAGACGCGCGC 100 41
LQF05_RS13570 2963433 .. 2963449 +  -2.9  -3.73224   ATGTCGGCTTGGCGG              GCTGATG GCC CATCGTC              TTTACTAGGCCCTGG  52 21
LQF05_RS13575 2964142 .. 2964155 +  -2.3  -3.66018   GCACACTGCGGGACT               TGGCC ATCA GGCTG                TTGTTGAGCTCGTCG  50 288
LQF05_RS13585 NONE
LQF05_RS13590 NONE
LQF05_RS13595 2966530 .. 2966556 + -15.1  -2.75712   AGGAAGTAAAAAAGT         TGCGCGACGCC AACGA GGCGCCGCGCA         TGCTTCGATCAGTAA  77 57
LQF05_RS13610 2970526 .. 2970550 +  -9.2   -2.7898   CGGCGGGCAAAAAAA         AG-GGGCGGGG TTGA CCCCGCCCGCC          TCCTTCCCTGTTCCC  57 250
LQF05_RS13655 2977334 .. 2977351 +  -4.1  -4.36914   TTCATCGAGCGCATC             GGC-CAGG AAC TCTGAGCC             TTTTCTCGCACCACC  65 11
LQF05_RS13660 2978453 .. 2978479 + -20.9  -5.28176   TCCTGGCGATGGAAA         GGCCCGAGCGG CATGT CCGCTCGGGCC         TTTTTTGTGGCTGAC 100 43
LQF05_RS13675 2981665 .. 2981677 +  -6.9  -3.14344   TGAGGTCCGCGCCGA                GGCGG AAC CCGTC                TTAATCCGCCACGTC  54 62
LQF05_RS13680 2982063 .. 2982079 +  -6.5  -3.06183   CAACCGCCACTGACC              TGGCCCA TCG TTGGCCA              TTGAGTGGCCATCGA  52 28
LQF05_RS13685 2983658 .. 2983671 +  -3.8  -3.31792   CCGGGTCCGCCGCCA               GCTC GTGCAA GAGC                TTGTCCAGGTCCTCC  49 380
         map NONE
LQF05_RS13810 3013181 .. 3013198 +  -4.8  -3.97947   GGGTTTGCCGCGGGT             CTGCTC CACTGC GGGCAG              TTTCTGCTGCATGGC  59 92
LQF05_RS13850 3020242 .. 3020272 +  -8.2  -3.28712   CGGCAGCAGGCGGTA       GCCGCCCCAGTG CGGAGGA CAATGGGGCGCC       TTATCGAGGAAGCGC  59 319
LQF05_RS13875 3025880 .. 3025926 +  -5.7  -3.31461   CACCCAGTTCATCCA CCAGCACC-CTGCGAACGGCGT TGGC ACGACGCTCGGAAAGGCGCTGG TTGTAGGCGTCGGTG  53 221
LQF05_RS13885 NONE
LQF05_RS13890 3027841 .. 3027851 +  -5.4  -4.08394   CCTTGACCGCTTCGC                 CGAA GAA TTCG                 TTTTGCGGCAGGTGT  64 364
LQF05_RS13900 3029591 .. 3029616 +    -9  -3.29459   ATTGCTGCGGGGTGA         GGCTGGCCAGT CCGGC GCTGGCC-GCC         TTGGCTTCTTCACTG  59 238
LQF05_RS13910 3031504 .. 3031540 + -12.4  -2.71912   ACATCTTGCGCGCCT   CGGTCCATGTTGCATCC AGCA GGATG-AACAGGGGCCG    CTTGTCTGGCTGTCG  65 326
LQF05_RS13920 3032495 .. 3032508 +  -3.7  -3.96148   CGCCGCATCCCGCCG               GGCCG AACT CAGCC                TTTGTCGTGCCGCAG  56 72
LQF05_RS13930 NONE
LQF05_RS13935 3038046 .. 3038078 +  -8.4  -3.06796   ACGGGATTCCGACAG     CAGGCCCT-GTTCGC AGAG GCGATCCAGAGCCTG      TTCGATCAGATCAGG  57 405
        mutS 3044091 .. 3044104 +  -2.3  -2.83403   TGGAGCTGCTATACA               GCTTG AAAT CACGC                ATTTGATACGCCGCG  39 6
LQF05_RS13965 3044580 .. 3044598 + -11.7  -4.61873   ACCGCTCAAAAAAAA             TGCCCGC TCGAT GCGGGCA             TTTTCATTTGTGGGG  95 50
LQF05_RS14040 NONE
LQF05_RS14045 3062544 .. 3062568 +  -4.1  -2.70932   ATCAGACCTTCTGGG          CCGAGTCGCTC GAC GAGCGAGGCCG          TCATTACACGCAGAG  41 118
LQF05_RS14050 3062850 .. 3062894 + -20.9  -4.18018   GGGCATACCTGCAAA AACCGATTGGCGGGCAGAAAT CCG ATTTCTGTCCGCCAATCGGCG TTTTCGCTACGCGAA 100 49
LQF05_RS14055 3064080 .. 3064090 +  -2.4  -3.65199   TGATTCACCGACGGG                 CGTC GGT GCCG                 TTTGCGTCGCGCATT  49 41
LQF05_RS14060 3066084 .. 3066100 +  -6.5  -3.74693   AGCGGTGCACGCCAT              CTGTTGC CTC GCAGCGG              TTTCGTCGCATGAAG  63 105
LQF05_RS14085 3071175 .. 3071192 + -12.7  -3.83724   CATAAAACGAAAAAA             GCCCGCA TCGC TGCGGGC              TTTGAGTTCTGTGGT  85 65
LQF05_RS14115 3076566 .. 3076578 +  -3.3  -2.75712   TAAAGAGTCGGCGCT                GACCA AGC TGGAC                TGATTGCATGACTGA  41 10
LQF05_RS14120 3077315 .. 3077328 +  -3.8  -4.28361   TCTTGTCGCTCACGG               CCAG TACGCC CTGG                TTTTCCTCCAGTTGC  66 176
LQF05_RS14140 NONE
LQF05_RS14145 NONE
LQF05_RS14150 NONE
LQF05_RS14155 3083815 .. 3083828 +  -2.3  -2.61728   CGGAGTACCAATTCA               GCCAT GAAA AAGGC                ATTGCTCTTCGGCCT  38 101
LQF05_RS14160 3084408 .. 3084422 +  -4.9  -3.36749   TCAGGGCGCAGGGGT               CTGCG AAATC CGCGG               TTCCTCTTCGCCGTC  49 64
LQF05_RS14170 3085760 .. 3085781 +  -6.5  -3.14132   GCGGTAGAGGATGCG           GTTGCCCGGC AGC GCCGG-CACC           TTGCTGCCCGGCAAC  51 162
LQF05_RS14180 3090379 .. 3090395 +  -2.2  -3.71284   GAACTACTGAGGAGG              CGGCAT GAGCG ATCCCG              TTCTGTTGATCACCG  52 31
LQF05_RS14185 3091520 .. 3091538 +  -6.6  -3.89291   GGATTTCACCTCGTA             GTCGTGGC TAT GCCACAGC             TTCTTCTCCTCTTCC  64 467
        egtB 3093324 .. 3093334 +  -2.4   -3.5764   CGCCGGGCTGCGCCT                 GGCC AGG GGGC                 TTTGAACATGGCATT  49 10
        egtD NONE
LQF05_RS14205 3096345 .. 3096367 +  -6.8  -2.64794   GGCGGTCAGGCTCAC           ACGCCGGCTC AGG GCGCTGGCGG           TCATCTGGCCTTCAC  47 293
LQF05_RS14215 3098601 .. 3098615 +    -7  -3.22091   GGGCGACCGTTTCGC               CCCGCC GCT GGCCGG               TTCGTGACTTAGCAT  54 120
         ngg NONE
LQF05_RS14225 NONE
LQF05_RS14230 3104641 .. 3104667 +    -5  -2.52623   GACAGCTACCTGCAG         GGCGGCGCGA CCTAGCA TCGCCCCTCC         GTCTTATCGAAGAAG  42 11
LQF05_RS14235 3105072 .. 3105082 +  -3.2  -3.53224   ACCACGGCGCTGGTC                 CAGT ACA GCTG                 TTTGAGCAGCGCCTC  49 183
LQF05_RS14265 3110273 .. 3110311 +  -8.9  -3.64703   CGCACGGGTACCGCT  TGCCATCGGGGCTCGACAG CAA CTGTCGAGC-C-GTCGGCA  TTTCCATCCCCGCGC  68 50
LQF05_RS14270 NONE
LQF05_RS14275 NONE
LQF05_RS14280 3113569 .. 3113600 +  -2.4  -5.18726   CACGCTGCACGGGCA      GGA-AAGCGCA TTACACCGCCT TGCGCTTCTCC      TTTTTCTTGTACAGC  83 138
        minC 3115464 .. 3115479 +  -3.2  -3.53717   TCCTGACGCCAAAAC              CGGG CGGAAGGT CCCG               ATTTTTCAATTTTTA  49 79
        minD NONE
        minE 3116596 .. 3116615 + -12.8  -3.37915   CACGGCGTACAGAAG            CGGCGGCC CACG GGTCGCCG             TCTTCGTTTGTGGGA  76 45
LQF05_RS14305 3117259 .. 3117280 +  -4.3  -4.15044   TGCGCTTCGAGTGTC           CCGCGCCAT TCTG ATGGAGCGA            TTTCTTCAGGCGACC  65 12
LQF05_RS14310 NONE
LQF05_RS14315 3119280 .. 3119293 +  -4.5  -3.14132   TCACCAGGGCCAGCT               TGCCG GACA CGGTA                TTGCTGGCCAGAGCC  45 107
LQF05_RS14325 3122523 .. 3122541 + -17.4  -4.86731   GTGACGTGAAATGAA             GGGGCCGC AAT GCGGCCCC             TTTTCTTTCAGCCCA 100 80
LQF05_RS14330 3124454 .. 3124479 +  -3.9  -3.06796   GGGTGCCCCGCTTCG         GCGGCCTGA GCCCACCA TCGCGCCGC          TTCGCTGCCATCAGG  45 119
        flgA NONE
        flgM NONE
LQF05_RS14435 NONE
LQF05_RS14440 3143492 .. 3143523 +  -5.6  -4.04149   CTACTGGGACTGATT      GCGCGGCCGGCATG TTAG CGAGCCAGATGCGC       TTTGTCATGTCGTTC  65 206
LQF05_RS14450 NONE
LQF05_RS14455 3144303 .. 3144314 +  -4.4  -4.20888   TACAATTGGCGCCAT                GAAG CCGT CTTC                 TATTTTTTCCCTTGG  65 124
LQF05_RS14460 3145192 .. 3145236 +  -7.7  -3.85542   TTATTCGAAACGCGC GCCGC-CATCGGCACGGCCG ACACAC CGGCGGAACCGATGAGCGGG TTGATTTTGTTCTGG  67 477
LQF05_RS14485 3150674 .. 3150695 + -15.9  -3.76048   CGCCAAAACGAAAAA           GGGCCTGCA TCGC TGCAGGCCC            TTCTCTTGATTGGCG  95 43
LQF05_RS14550 3161552 .. 3161568 +  -4.3  -3.45088   AGTCACAATACGCCT              CTGCGGT TTT GCCGAAG              TTACATTTGTTTTCA  52 84
LQF05_RS14555 3163009 .. 3163040 + -17.4  -4.42386   CTGATCCAAGCGCTA      CAAAAAAGCCCCGG TTCT CCGGGGCTTTTTCG       TTTTCTACCTCGCCA 100 37
LQF05_RS14565 NONE
        modA NONE
        modB NONE
        modC 3167445 .. 3167458 +  -2.3  -3.44229   CATTGGCACGGATGG               CCGGT GAAT AGCGG                TTGTGCTCGTAGAGT  47 371
LQF05_RS14590 3168986 .. 3169003 +  -5.5  -3.24747   ACCACCACGGCCACC             GGGC-CGC TGC GCGGGTCC             TTCATGATCTCCAGC  51 431
LQF05_RS14660 3182039 .. 3182056 +  -8.3  -3.32343   ACCTGAGCTGGTGAT             CCCGGCG CTCG CGCGGGG              TTATCAGCCTATCGA  59 27
LQF05_RS14735 NONE
LQF05_RS14740 3195250 .. 3195267 + -14.1  -4.77036   CGCTGCGCTTGATCA             GGCCGCC TTCG GGCGGCC              TTTTTCGTACTCGCC 100 43
LQF05_RS14745 3196109 .. 3196120 +  -5.8  -2.65532   TGACCAACGAGACTG                CTCG GCCC CGAG                 TCGCTTTGGCATAAT  46 38
LQF05_RS14750 NONE
        napE NONE
LQF05_RS14765 NONE
        napA NONE
LQF05_RS14775 NONE
LQF05_RS14780 3202157 .. 3202172 + -10.4  -5.21709   TCGGCGCAAAAAAAA              CCTGGC TCAG GCCAGG               TTTTTTCATATCCGG 100 49
LQF05_RS14790 3203318 .. 3203335 + -14.1  -5.28176   AGCTTCTCTGAAAAA             GCCCCGC TTCG GCGGGGC              TTTTTTGTGCCTGCG 100 46
        metG 3206709 .. 3206745 + -24.6  -2.71144   GCGCGTCATGTAACC   CG-GCTTCGCGTGCCGG CCCG CCGGCACGCGAAGCTCG    TCGTTAACGGAAATG 100 28
LQF05_RS14805 NONE
LQF05_RS14810 NONE
LQF05_RS14815 3207831 .. 3207848 + -11.3  -5.04601   ACGCCTATCGTTAAA             GCCCTGT TTTT ACAGGGC              TTTTTCGTTTCTGGC 100 41
LQF05_RS14875 NONE
LQF05_RS14880 3217260 .. 3217281 +  -2.2  -3.61715   ACTGAGGACACATTG           CTCCGTGA TAACCT TCGCTGAG            TTCTTAGACAACCTC  49 5
LQF05_RS14885 NONE
LQF05_RS14890 NONE
LQF05_RS14895 3220320 .. 3220332 +  -7.7  -2.83822   CCCCGAACGATAATG                TGGCA CGA TGCCA                TCGTTATGGCGTCGC  55 84
LQF05_RS14900 3221428 .. 3221445 + -11.3  -5.04601   GACACCATCGTTAAA             GCCCTGT TTTT ACAGGGC              TTTTTCGTTTCTGGC 100 253
LQF05_RS14965 3233848 .. 3233903 +  -4.8   -3.7795   AAGCCGCACCTATCA GGCGGCG-TAT--CAGCG-CGACGCGCT CGTG GGCGCGCCGGTACTGGCATAGCGCCGCC TTTGCTGACATTTCA  57 82
        rfaH 3234853 .. 3234902 +    -7    -3.214   CTAAACACCGTACCG CTCG-ACCGCGCTGCGGCGACGC CTTGC GCTTCGCTACAGCACTGTACGGG TCTTCATGTCCTCAG  54 268
LQF05_RS14975 NONE
LQF05_RS14980 3236798 .. 3236823 +    -9  -3.14132   ATCGGGCAAGCAACG         AGGAAGGAGG GTTACA CCTCCTTCCG          TTAATCCGAAACACC  61 40
LQF05_RS14985 NONE
LQF05_RS14990 3239819 .. 3239845 + -16.7  -3.60098   ACCGCCTATTCCAAA         CGGATGCCTTC CCAAC GAAGGCATCCG         TTTGCAATCGACAAT 100 153
LQF05_RS14995 NONE
LQF05_RS15000 NONE
LQF05_RS15005 3242919 .. 3242935 +  -4.3  -2.52795   TTCAAACCAGTGGCC              GCGCTTT TAA GACGCGC              TGCCTTGGCGCGCTT  42 79
LQF05_RS15010 NONE
LQF05_RS15015 3246076 .. 3246095 +  -6.4   -2.8001   AGACAACGACACGCT            GGTTTCTC GTCT GAGGAGCC             TGTAATGCGAGTTCT  50 1
LQF05_RS15020 NONE
LQF05_RS15025 NONE
LQF05_RS15030 NONE
LQF05_RS15035 3250493 .. 3250522 +  -8.5  -2.89742   TCAATAACTTTATTA       GCGGATCGCTGAA ACGC TGCAGCGAGTCGC        TGTCTGCCGCTTCAC  55 108
         gmd NONE
LQF05_RS15045 3252661 .. 3252682 + -13.7  -3.28984   CTCGCCAGTAACCAT           CGAGGTCCG ACTT CGGGCCTCG            TTAATCATTCGATTC  81 30
LQF05_RS15050 3254069 .. 3254095 +  -4.2  -3.61398   GCCATGAATGGGAGA         CCGGTACGGCGT CCT GCGTTGCTCCGG         TTGTTGGAAGCAGCG  54 34
LQF05_RS15055 NONE
LQF05_RS15060 3256064 .. 3256076 +  -3.3  -3.85909   TGCTCGAAGCGGCTG                CGCCG TAC TGGTG                TTTGCATTTCAGTGA  56 80
LQF05_RS15065 3257099 .. 3257112 +  -9.5   -3.4945   GGGGCTACCCCGACC               GGGCG CACC CGCCC                TCTTCTTCCTTGACT  66 494
LQF05_RS15070 3257794 .. 3257806 +  -6.2   -4.4078   GCTACCGGCACCCTG                GCCG AGCAG CGGC                TTTTCCTTGAGCAGC  73 399
LQF05_RS15080 3259706 .. 3259728 + -14.8  -3.72576   AAGCGCTTGACGATG           CTCGGCGCCG GCT CGGCGCCCAG           TTTGCTCACCACCAC  89 221
LQF05_RS15095 3263831 .. 3263846 + -11.8  -4.17491   GCCAGAAAACAAAAA              CCCCGG CTAG CCGGGG               TTTTCGCCATTTGGT  89 47
         lon 3272481 .. 3272498 +  -3.3  -4.21314   CGCCGCACCCCTGAC             ACGTCTG CAGC CGGACGC              TTTTGGGCTATTCTT  62 93
LQF05_RS15120 NONE
        cmoA NONE
        cmoB 3275075 .. 3275086 +  -7.2  -3.01712   TCACGAACAGGATGA                GCGG ACGC CCGC                 TGTTCAAACAAACGA  52 387
LQF05_RS15140 NONE
LQF05_RS15145 3276300 .. 3276345 +  -7.5  -3.49475   CCGCCGCTGAGCAGC GCCGTCC-CAGCGGAGAGCA CCGCGAA TGCGCTCTTCAGCGGACGGC TTGTCTCACCCTCGC  58 31
        nadB 3289129 .. 3289152 +  -2.2  -2.61274   CAGCAGACCGGACGG          CCGCCAGTGG CACT CGAAAGGCGG           ATTACTTGGGCTGGA  38 408
LQF05_RS15225 NONE
LQF05_RS15230 3291525 .. 3291537 +  -4.7  -3.29144   AGGGACGGCAATTTC                GCCGC ATC GCGCC                TTGTGCCCCGCCTGC  49 104
LQF05_RS15235 3292284 .. 3292303 +  -2.8  -3.76125   ATTTCAACATCAGAT            GCCGAGTCG CAT CGA-TCAGC            TTTGCCTTCGACTGA  54 205
LQF05_RS15245 3294360 .. 3294376 +  -5.7  -3.72576   CGCACTGGCCCCGCC              CAGGCGC ACC GTGCCGG              TTTCGTGACCGCCCG  60 54
LQF05_RS15250 NONE
LQF05_RS15255 3296539 .. 3296549 +  -4.6  -2.64099   CGAATGACGTGTGGC                 CGCT GAT GGCG                 ATTCTCCTGACGCCA  43 118
        rsxA NONE
        rsxB NONE
        rsxC 3301340 .. 3301351 +  -5.8  -2.66964   TGAGAAATGACCGCT                GCAC CGGT GTGC                 TGGTGTAGTCGCTCG  46 38
LQF05_RS15280 NONE
        rsxG NONE
LQF05_RS15290 3303925 .. 3303935 +  -2.4  -2.79915   ACCAGCCGCCGAGTG                 CGGG TGA CCGG                 TGTGATCGAGTGAGT  39 2
         nth NONE
LQF05_RS15300 3304895 .. 3304908 +  -9.5  -4.81083   CTGTAAAAAGAAAAA               GCCCC GAAA GGGGC                TTTTTCATACTTGCC 100 35
        pyrC NONE
         rnt 3309549 .. 3309568 + -13.6  -4.62069   CTCCATAACGAAAAA            GGCCAGTC ACAT GACTGGCC             TTTTTCACATCACCG 100 87
        ccsA NONE
LQF05_RS15385 3320951 .. 3320963 + -10.5  -3.28712   CTTCACCGCTGCCGC                GGCGC GTA GCGCC                TTCTGCCGCGCAGCA  65 81
LQF05_RS15410 NONE
LQF05_RS15415 3325010 .. 3325033 +  -7.4  -3.53012   TCTCCACTTTCCACT          CC-GGCACGTG TTG CACCTGCCCGG          TTTGCCCGAGAAAGG  60 191
LQF05_RS15450 3334610 .. 3334638 + -13.2  -3.14564   GCGTGCGGCAATAGT       GGCAGGC--GGCGC GCC GCGCCAAGCCTGCC       TTCGTCGACCGGTGC  78 65
        rhlB 3336274 .. 3336293 +  -4.2  -3.29829   TGAATCAGGCCGGGG            C-CCAGCCG AAG CGGCTAGAG            TTGTAGCCAGGTATC  49 114
LQF05_RS15460 3336551 .. 3336575 +  -2.8  -4.56133   ACTGGCACGGCCTTC         CACC-CAGCGCG GGC CG-GCCGAGGTG         TTTTCCTTCTTCCAG  69 84
        yaaA NONE
LQF05_RS15495 3343533 .. 3343556 + -15.4  -4.72272   TCTCGGTGCATTGAG          GAAAACCCGC TTCG GCGGGTTTTC           TTTTTCCTGGCCCGG 100 45
LQF05_RS15500 3344215 .. 3344229 +  -7.8  -3.98804   CTGCCAGTCTTGTTC               GTCTCG CGA CGAGGC               TTGTTTGCAGTTTCA  70 219
LQF05_RS15520 3347402 .. 3347442 + -13.3   -5.4505   CAGGGTTATAAAGAA  CGCCGCTTCCCGACGTT ATTGATC GACGTCGACAAGCGGCG  TTTTTTATTGCGCGC 100 48
LQF05_RS15530 NONE
LQF05_RS15535 NONE
LQF05_RS15540 NONE
LQF05_RS15545 NONE
LQF05_RS15550 NONE
LQF05_RS15555 3356264 .. 3356282 +  -5.9  -4.18018   GCCCTCGGACAGATT             GCCGATG AAGCC CAGCGGC             TTTTCCGTGAAACGG  66 383
         pyk 3358851 .. 3358883 + -23.6  -3.53012   CGCGCCAGCGCATCA      GCACAAAGGCCGGC TTCTT GCCGGCCTTTGTGC      TTTCAGGAGACGCCG 100 42
LQF05_RS15590 3362690 .. 3362722 + -17.8  -3.53444   AGCATCTGCGCGGAA      ACGAAAAGCCCGGC CTAGT GCCGGGCTTTTCGC      TTTCACACCGCCTGA 100 40
LQF05_RS15615 NONE
LQF05_RS15620 NONE
LQF05_RS15625 3368580 .. 3368599 +  -2.8  -4.33105   AGCCGGTCTCGCCCA            GGT-CGGCT TGC AGTCGCGCC            TTTTCCTCGTGGTTC  66 325
LQF05_RS15640 NONE
        folM NONE
        folX 3371651 .. 3371668 +  -2.7  -2.64099   GCGGAACAAGGCTGG             TTCG-CTC AAC GAGGCGAG             GTTATGATCCGGCCG  38 42
LQF05_RS15655 NONE
LQF05_RS15660 3372470 .. 3372483 +  -2.3  -3.59979   CCATGCCGCAGCGCG               GCGGA TAAT TCAGC                TTTCGCATCCCGCCC  49 156
        cysZ 3373657 .. 3373686 +  -7.8  -3.17075   GTGATAGTCGGCTTG       CC-GGTCAGCTGG CGGGT CCAGCCGGCCAGG       TTGAGTTCCGAGCCC  55 375
LQF05_RS15690 3377848 .. 3377882 + -15.9  -3.01712   AGGCGAGCAGCGATA    GC-GAAACCCGACAGGC CAT GCC-GTCGGGTTTCCGC    TCTTGAGCGCCGCGG  83 48
         pta 3380094 .. 3380142 + -21.8   -2.6574   GGGCTGATCGGCCTT CTGACGATGGCTGCCGCCG-CGC CTGC GCGTCGGCGGCAGCCATTGCCAC TACTCTCGATAGTTG 100 34
LQF05_RS15700 3381316 .. 3381351 +    -7  -3.04144   CCAGGTCGATGATCG   TGCTGACGAC-CGCCGC ATCGC GCGGCGAGTC--CAGCA   TGTTGGCAATGAACA  50 215
LQF05_RS15725 3391348 .. 3391360 +  -4.8  -3.32268   CCAGCCGCCAGCCCA                GAGC TCCTC GCTC                TTCTCCGGCTCGTTG  51 474
LQF05_RS15740 3394386 .. 3394412 +  -5.8  -4.56597   GCGGCTTGCGAGAGA        GGCCGCCGAGC CCCTAA GCTCC-CGGCC         TTTTTCAGGGAGACG  74 52
LQF05_RS15745 3395567 .. 3395597 +  -3.4  -3.53091   CCATGGCGCATGCGA     CC-GGCCA-GC-CTA GCAT TAGCGCATGGCCCGG      TTTGACAAGACCCAT  49 163
LQF05_RS15750 NONE
LQF05_RS15755 3397022 .. 3397036 +  -7.8   -3.5002   GGCGGCCAGCTCCAG               GCCGAT CAG GTCGGC               TTCGTTCTCGTTGCC  60 241
LQF05_RS15765 3400015 .. 3400037 + -17.8  -2.71924   GCAGTGCCGGGCTCG           GCTGCAGCAG CAA CTGCTGCAGC           GTTTCGAGCGGCGTG  84 136
LQF05_RS15785 3402686 .. 3402699 +  -4.5  -3.12351   GCGCATGAAACAGCA               TCGGG ATTC CTCGA                TTACATGTCGACCGG  46 307
LQF05_RS15795 3404405 .. 3404431 + -20.9  -2.82623   CAGCCCGCTCGCCAC         CGACGCCCCGC CTCGT GCGGGGCGTCG         TCGTTATGGCAGGGG  95 41
LQF05_RS15805 3405499 .. 3405521 + -14.9  -4.74103   CGGAGGCACAAAAAA           GCCCCGTAC GTTCG GTACGGGGC           TTTTTCGCTTCAGCG 100 55
        dauA 3409612 .. 3409655 +  -8.2  -2.59742   GAACGCTCCGGCGGC CATGCCGGCGGAGCGCC AAGCGGCAGGA GGTG-TCAGCCGGCATG CTTCTGCAGGTTGGC  52 39
LQF05_RS15830 3412059 .. 3412069 +  -2.4  -3.29471   CAAAAGCTGACCAGA                 GCCG CCA CGCC                 TTAGTCTCATAAGGC  44 228
LQF05_RS15835 NONE
LQF05_RS15840 3413370 .. 3413384 +  -5.6    -3.524   CCGCCGATGCCGAGT               GCACGG CAG CCTTGC               TTCTGTCGCTCACTG  55 104
LQF05_RS15845 NONE
LQF05_RS15850 NONE
LQF05_RS15855 NONE
        osmE NONE
LQF05_RS15865 NONE
LQF05_RS15870 3418066 .. 3418083 + -12.7  -3.12351   TACGGAATAAAAAAA             GGCCACC CGAG GGTGGCC              TTAAATCTAGGAAGA  72 62
LQF05_RS15965 NONE
LQF05_RS15970 NONE
LQF05_RS15975 NONE
LQF05_RS15980 3440986 .. 3441021 + -12.6  -3.08776   GTATATCGACTGATC    GGTCA-GCGGCGCCC TATCACC GGGCGCCGCATCACC    TCATTTTACGACCTT  72 28
LQF05_RS16020 NONE
LQF05_RS16025 3448460 .. 3448477 +  -4.7  -4.03234   CCAGTACACGCTCGA             CCTGGCG ATAC TGCCCGG              TTTCTATAAGCAACG  62 468
LQF05_RS16055 3453568 .. 3453599 + -20.3  -5.28176   CGCCTAACCGGAATC      CAAAACCCCCGCC CTAGCC GGCGGGGGTTTTG       TTTTTTGTGCATCGA 100 78
LQF05_RS16075 3459823 .. 3459834 +  -5.8  -2.79302   CGCGGCTGGCGATGA                CCTG CCGG CAGG                 TCTGCTCGAAATACT  47 314
LQF05_RS16135 NONE
LQF05_RS16140 NONE
        lptC NONE
        lptA NONE
        lptB 3472052 .. 3472069 +    -2  -5.15634   ACCTGGGCCACGAAT             TCCGACT GTAAG AG-CGGA             TTTTTTGCTCGGCTC  78 15
LQF05_RS16160 3473745 .. 3473762 +  -6.9  -3.01712   CGAACTGTCCCGGCG             GCAGGCC TCAA GACCTGC              TCTTCGCACAAGGCA  52 53
        raiA 3474087 .. 3474103 +  -2.2  -2.86271   ACCACACCCAGGGTG              CCGTCA CCCGC TGACGC              TCATTATGATCCGAC  40 12
        ptsN NONE
        rapZ NONE
LQF05_RS16180 3475900 .. 3475940 +  -2.4  -3.29144   TGTCGCGCAGATTGC  CGGCGATGGTCACCTCCT GCACG GGGAACTGAATCTCGCCG  TTCTCCACCCAGTAG  44 192
LQF05_RS16190 3478232 .. 3478265 +  -7.4  -3.43492   GCGGCGGCCATTGCC     GGTCGGTGCGACGCC CATCA GGCG-CGCATTGAGC     TTGTCCTGGATATAG  60 491
        gatC NONE
        gatA 3492237 .. 3492254 +  -3.3  -2.57564   GGTCAGCGACTGGCA             CCTGCGCG CCC CG-GCCGG             ATTCTGAGGAGATCG  40 1
        gatB 3493806 .. 3493818 +  -6.9  -3.55444   CCCGAACTTCGCCAT                GCCTG CCG CGGGC                TTTCGCCGCTCGAGC  58 111
LQF05_RS16255 NONE
LQF05_RS16260 3495430 .. 3495440 +  -2.4  -2.79302   CGATCCTTTTCCTTA                 GTGG AGC CCTC                 TATCGTGACCCTGAT  39 45
LQF05_RS16265 3496833 .. 3496849 +  -5.1  -3.29461   CGCTGAGTGCGAGCA              GGCTG TGGGTGC CAGCC              TTGTGGCGAACATTG  49 328
LQF05_RS16300 3502436 .. 3502475 +  -6.2  -2.91681   TTTACGAATGATTAT  CATGCGGGCGCCAACGAG ACGG CTACAAGGAGCCCGCATG   TCTATCCCCTTCGCA  48 166
LQF05_RS16305 3504699 .. 3504728 + -12.2  -3.60098   TGACCGCCCAGAAGA       CGACGA-GCCGGG CTGGC CCCGGCTTCGTTG       TTTCCGGTACAGCCT  82 38
LQF05_RS16310 3505446 .. 3505461 +  -4.6  -3.63515   TCATTAAGGACTGCC              CATGCG TAAA CGCCTG               TTGTTGCCCCTCGCC  54 34
LQF05_RS16315 NONE
LQF05_RS16320 3506851 .. 3506886 +   -11  -4.12188   CGCCCTGACGCGCCG    ACCAGGTCCGAGCCGT CGTA ACGGCTCGGGCCAGCC     TTTTCCCCCTCGTCG  84 33
LQF05_RS16325 3508481 .. 3508508 + -16.4  -3.91716   GACGCCTGGTAACGA        CAAAGGCCGCTT CGAA GAGCGGCCTTTG         TTCTTTCACGCCTGC  95 39
LQF05_RS16335 3511605 .. 3511615 +  -5.4  -3.30124   GCTGGGTCGAGGTCT                 GATG CAG CATC                 TTCTGCGCCGTGAGG  52 24
LQF05_RS16340 3512385 .. 3512403 + -17.4  -3.14344   AGGCGGAAACGAAAA             CGCCCCGC ATG GCGGGGCG             TTCGTGCAGCGACTA  89 46
LQF05_RS16350 3515780 .. 3515801 +  -9.3  -3.46178   CGGGTTTCAAGTTCC           GGCGGCAGC ACCC GTGGCCGCC            TTGTGCTGGATTTCT  66 230
         cra 3525757 .. 3525781 +  -2.8  -3.53012   CCTCTTGCGGGCGCC         GACGCACTGGC GGAA GCTTGT-CGTC          TTTCGAACAGCCCGC  47 44
LQF05_RS16385 3526091 .. 3526119 +  -2.4  -2.72144   AGCTGGCCGACAACG       AGCGG-CGCTTCGT CCG ATGA-GCGACCGCC       ATTTCGACGAGCTGG  39 6
LQF05_RS16390 NONE
LQF05_RS16395 NONE
LQF05_RS16400 3528142 .. 3528166 + -12.9  -2.62263   AACCTGCCGCGGTGC          TGGCGAGCG ACTGCCG CGCTCGCCA          TACTGTCGCGCCGCT  68 53
LQF05_RS16405 3528911 .. 3528926 +  -6.1  -3.35798   CACCGACGACAGGTC              GCTGG CCATGT CCAGC               TTGTCGATCCAGGCT  53 287
LQF05_RS16415 3530151 .. 3530166 +  -2.4  -4.98616   ACATCGCCCGGTATG              CCCCGG GGCA CTGCGG               TTTTTCCTCTTTTCC  75 51
LQF05_RS16420 NONE
LQF05_RS16425 3532108 .. 3532129 +  -4.3  -2.60244   CGCGTCAGTCCCAGG           CGCAGCGCG TCGA TGTACTGCG            TGCGTTCCTTGGCGC  41 76
LQF05_RS16445 NONE
LQF05_RS16450 NONE
        pilV NONE
LQF05_RS16460 NONE
LQF05_RS16465 3539052 .. 3539062 +  -5.4  -2.79004   TAACAACTGAGAGCC                 GACA TCA TGTC                 CTGTTTTCGACCTCC  46 31
LQF05_RS16470 NONE
LQF05_RS16475 3543230 .. 3543247 + -11.3  -5.00616   TAGACAATAAAAAAA             GGGGTCT CTAA AGACCCC              TTTTTTGACGAGAAA 100 57
        rpsT 3551313 .. 3551327 +  -8.5  -5.96219   TTCTTGTAAAAAAAA               CCGGC CTAGC GCCGG               TTTTTTTTGTGCCTG 100 48
LQF05_RS16540 3556324 .. 3556347 +  -2.2   -2.7566   TCCTATCAAGCCCCT          CCCTCCGCTC GCAT GAGCGGTGAA           TAATTGCGCTTGCAT  39 80
LQF05_RS16545 3557123 .. 3557141 +  -5.8  -3.42574   GAAGGCACGGCCTTC             GGCAGCGG CGG CCTCGGCC             TTCTGCTGAGCTTCG  53 508
LQF05_RS16585 3564457 .. 3564482 +  -9.6  -2.71364   CGCCGGGAGCGGACC         TCGGCGGCGC TCAACC GCGCCGCTGC          TCCTTGAGCAGGTCC  57 64
LQF05_RS16595 3565387 .. 3565404 + -14.1  -4.45771   AGCGAAACGGAAAAA             GCCCGCC ATTC GGCGGGC              TTTCTATTTTCACCT 100 46
        radA 3567367 .. 3567381 +  -7.1  -3.14463   GAGCGCGGCCAGCTC               GCGCT CCAGC AGCGC               TTCGTCGCCGAGATT  51 56
        ettA 3571562 .. 3571579 + -12.7  -3.18264   GTATGCACGCAGGAA             CGGAGCC AATC GGCTCCG              TTCCTGCGTCAGAAA  74 45
        siaA NONE
        siaB NONE
        siaC NONE
        siaD NONE
        gdhA 3577107 .. 3577133 + -21.6  -3.60151   GGCCAGAAAGACAAA         GCCCCCGTCGGA TCG TCCGGCGGGGGC         TTCTGCTTTGCGGGG 100 65
LQF05_RS16660 NONE
LQF05_RS16665 NONE
LQF05_RS16670 3580100 .. 3580127 + -10.5  -2.52464   AACGAATGACCAACT        GCCGGGCTTGC CTTGCT GCAGGCGCGGC         TCAGTTCGGCGGCGC  60 32
LQF05_RS16685 3583872 .. 3583889 +  -3.3  -4.97312   TTGCGAGCAAAACCC             GGATGCC GGGT GGCCTTC              TTTTTGGTTACTTTT  77 256
LQF05_RS16720 3591462 .. 3591474 +  -3.3  -3.56092   GGCACTGTTCGTGGT                CAAGC TGG GCTGG                TTTACCGGCTGATCA  49 1
        trmA 3592816 .. 3592839 +  -6.6  -3.92522   CAATCGGTGGTTCAC          CGTCGGCG-GC AGC GCGCGCCAGCG          TTTCTCCGGTTGCCG  64 175
LQF05_RS16760 NONE
LQF05_RS16765 NONE
LQF05_RS16780 3604117 .. 3604139 +  -3.3  -3.30441   CGCCTCGGAGGTGCC           GCATGCAGC CTGCA GCTGAACGC           TTCTGGACAGTCCTG  47 7
LQF05_RS16785 NONE
LQF05_RS16790 NONE
LQF05_RS16795 NONE
LQF05_RS16800 NONE
LQF05_RS16805 NONE
LQF05_RS16810 NONE
LQF05_RS16815 3610526 .. 3610569 + -31.2  -3.53091   GGCCTGAGGCGCAGA CGCGACAACGCCCGGCCGAT TCGC ATCGGCCGGGCGTTGTGGCG TTTCAGCCGAGCAGT 100 34
LQF05_RS16875 NONE
        narL 3628076 .. 3628106 +  -2.5   -2.7094   GTGCTGGAGAACGAG      GCGAAAGGTTGAGC CACC GC-CAATCGCTCGC       ATTCTGTGCGTGAGC  39 14
LQF05_RS16885 3629230 .. 3629267 +    -4  -3.67597   TGCAGAACATCGCCA  CGCACACCACGGCCAGGC ATCT GCC-GGCCG-GTTGCACG   TTGTTCCATCAGGGG  51 216
LQF05_RS16900 3630789 .. 3630815 +  -3.7  -3.53444   GGGCAATCGCAGGCT        GCAGAAGCGCTTC CAT GAAGCGC--CGGC        TTTCGGCAAGGCTGC  51 141
LQF05_RS16925 NONE
LQF05_RS16930 3644600 .. 3644610 +  -3.2  -3.53012   GCTCCGGCCATTCAT                 TGTG CGG CACG                 TTTACCAGCACCCCG  49 196
LQF05_RS16950 NONE
LQF05_RS16955 3649185 .. 3649227 +  -6.9  -3.01712   CCGACCAGCGCCACG GTGCCATGCCGCCGCGCCAT GCCG ATGGCCTGGCCGAA-GGCGC TGTTGGACACCGCGG  50 297
LQF05_RS16965 3651090 .. 3651116 +  -6.5  -3.86835   GCTCCCACGAAACGA         GGCCGCCAC GATGAGCCA GTGGCTGCC         TTTCGTGCTGTTTGC  65 117
LQF05_RS16970 3651703 .. 3651739 + -12.9  -3.64283   CGGAGCGAGTGGAAA    GGGCTGCGCCGTTCCCA CCC TGCGGACGGCTCAGCGC    TTCTTAGCCGGTTTA  82 41
LQF05_RS16980 3654948 .. 3654960 +  -3.3  -3.18264   CCTGACCGTCAGCCC                GCCAC CGA GTGTC                TTCATGAATCCAGGA  45 60
LQF05_RS16985 3655816 .. 3655837 +  -2.1  -3.30124   GAGCAGCTCCTGCGC           CGCCGCTTC CGAT GAGGCCGGG            TTCTGCCCGGTCACC  45 65
LQF05_RS17040 3671784 .. 3671806 + -10.4  -2.93723   AGCCTCATCGAAGAA           CGCCGCCGAC AAG GGCAGCGGCG           TGTCCTTCATCCACA  62 228
LQF05_RS17050 3673589 .. 3673607 +  -3.8  -2.87132   TCAAGATAAACACCA             TGCAAATC AGC GAGTTGCG             TATCTGGCACGGAAC  42 133
LQF05_RS17055 3675152 .. 3675169 + -14.1  -3.30007   TCGTCTGATGGGGCG             CGCCCGG CTCG CCGGGCG              TTGTGCGCCGCTGTT  81 33
LQF05_RS17060 3676093 .. 3676117 +  -2.6  -2.70932   ACTGACCTGCGGCAA          CGCGAGCGGG CATAA CCGGCGCGCC          TGCTTGGCAAGCGGC  39 49
LQF05_RS17065 NONE
LQF05_RS17070 3678930 .. 3678949 +  -2.8  -3.29144   CATCAAGCGCCACCT            GCGCTG AATCGCCG TAGCGC             TTCTGGCAGCGCTCG  45 298
LQF05_RS17090 3682438 .. 3682480 +  -6.3  -3.32159   AGTCGCCGGGGCGCT CGGCGCCCTCG-CT-CGAATG GTG CATTCGCAGCCGACGGCGACA TTCAGTTTCGTGTAA  52 438
LQF05_RS17100 3682858 .. 3682875 +  -2.6  -2.68545   AACAGGACGACTAAA             GGCCAC CCATGC GTGCCC              CTCTTCTTGTAACGC  38 27
LQF05_RS17105 NONE
LQF05_RS17110 NONE
LQF05_RS17115 3685227 .. 3685262 +  -6.1  -3.16564   AGCGTGTTCTGTACC    TGGTGCCCG-GCGACG ATACG CGTGGCGTGGGTGCCA    TTGATCGGGTAACCG  49 103
LQF05_RS17125 3686682 .. 3686707 +  -3.8  -5.24796   CTGGGCCTGGAATCC         GGGTTGCGCC TCTCAC GGCGCGTCAC          TTTTTCTTGTCTGGC  84 150
LQF05_RS17130 NONE
LQF05_RS17135 3692540 .. 3692555 +  -6.8  -3.81488   GGCGCTGACAGGCTT              GCGG-CC ATC GGTCCGC              TTGTGTTTCGCCAGC  63 83
LQF05_RS17140 3694976 .. 3694990 +  -4.2  -3.09834   GATGACTTCCGGGTC               GCGG GCGAGCA CCGC               TTCGATGCTCACCTG  45 232
LQF05_RS17205 NONE
LQF05_RS17210 NONE
        thpR 3705753 .. 3705775 +  -7.6  -3.55444   CACTTCCAGCAACTG           CCCTGGTTGC ATG GTCGCCAGGG           TTTCCAGCGTGGCGA  62 183
        trxA 3708336 .. 3708381 +  -9.8  -2.62184   GCGCTGTGCCAGAGC GCATCGGCC-GGCGGCGATGC CGCCGTT GCAG-GCCGCCCGGCCGA-GC TGATCTCGACGGCGC  55 251
LQF05_RS17240 NONE
LQF05_RS17245 NONE
LQF05_RS17250 NONE
LQF05_RS17255 3712103 .. 3712151 + -10.3  -3.31144   CATGCCCTCCAACAG CTTGG-CGCCCTG-CCAGGGCTG GCCGG CGGCACTGGCCAGCGCGACCAGG TTGTCCAGCTCGGCC  67 401
LQF05_RS17290 3717583 .. 3717607 + -18.7  -5.12707   CGAATCGCAGACAGA          CAAAAGGCGCC ATC GGCGCCTTTTG          TTTTTTCCGGTTTCG 100 55
        uvrA 3724459 .. 3724481 + -11.3  -3.34962   ACCAGCCGCAAAAAA          GCCGGG-CTC TTCC GAGGCCCGGC           TTCTGCGCTCTACGG  72 43
LQF05_RS17595 NONE
LQF05_RS17600 3770288 .. 3770307 + -10.7  -4.74103   CCGCGTAATCAAAAA            CGCCGTG CATAAA CACGGCG             TTTTTCGGTTCAACG 100 45
        hemJ 3772400 .. 3772417 + -14.1  -3.89346   AAAGCTCCGATCAAA             GCCGGCC CGGC GGCCGGC              TTTGTGGCATACAAC  91 40
LQF05_RS17620 3773917 .. 3773953 +  -3.6  -3.95787   TCCCCAATACCCGCT   GG-CTGAC-ACCGCCGTC CAT GTCGCCGGTTGCCAGGCC   TTTCTCGATCTCGTC  58 472
LQF05_RS17630 NONE
        coq7 3776109 .. 3776132 + -16.8  -5.36441   GGCGAGCGGGCACAA          GAAAGGGCGC AGCG GCGCCCTTTC           TTTTTTATGTCGAAC 100 44
         crp 3777796 .. 3777824 + -23.9  -2.72344   GACCCGTCAGACTCG        CCGCCTGTCCGCG TCA CGCGGGCAGGCGG        TCATTCCGGATCGGC 100 39
LQF05_RS17720 3795194 .. 3795208 +    -7  -3.74693   ATGCTTGCTCAGCAA               CCGGCG ATA CGCCCG               TTTGATCAGCTGCGG  62 166
LQF05_RS17740 NONE
LQF05_RS17745 3801737 .. 3801766 + -13.5  -4.54727   CACGCAACAGCAATG       CGGGGTGATGGCC GAAG GGTCGCCACCCCG        TTTTCATTTCCGGCG 100 58
        pdxA 3802907 .. 3802929 +    -4  -2.58714   ACGCTCTTGCTTGAC           GCTTGCGGCT TGA AGCCTGGAGC           TGCCTTCATGTCCGA  40 129
        rsmA NONE
        apaG NONE
LQF05_RS17765 NONE
        glpE 3805330 .. 3805342 +  -4.7  -3.21276   AACGCCGCGTCATCC                GCGGC CCA GACGC                TGTTGTCAGCCGAAC  48 57
LQF05_RS17775 3807504 .. 3807543 + -20.8  -3.10533   GTAAGCGGCTGGAAG  CCTGAAGCCGGGAACGGA ACGC TCCGCTTCCGGCTTCGGG   TCTATGCTTTTCAGC  95 37
LQF05_RS17780 NONE
LQF05_RS17785 3810407 .. 3810433 + -11.4  -3.14211   GAACTTCGCCTGACC         GACGTCGCGGGC AAC GCCCGCGGCCCC         TTCCTCAGCACCAAT  69 28
LQF05_RS17790 3811967 .. 3811982 +  -6.8  -3.31461   CAATCCCTTGCGATC              CGGCGCG TAA CGC-CCG              TTGTCCGCCTCGATG  55 317
        plsY 3813537 .. 3813550 +  -8.1  -2.78463   CAGCGCGATGTCGCA               GCGAG TCTG CTCGC                TGTCGTCGCCGGCAT  51 355
        rpsU 3814682 .. 3814697 + -11.8  -4.28774   TGACGTCGCATCAAA              CCCGGC TTCG GCCGGG               TTTTGCATTGCATGC  89 52
        dnaG NONE
        rpoD 3818672 .. 3818689 + -14.1  -5.04249   GAGTAAGACCCAGAA             CCCCCGG CATG CCGGGGG              TTTCTTTTTTCACCA 100 35
LQF05_RS17830 3818859 .. 3818875 + -15.1  -5.04601   CCCACCACCTTCAAA              GCCGCGC ATT GCGCGGC              TTTTTCATTTGTGCA 100 34
LQF05_RS17835 NONE
LQF05_RS17840 3822204 .. 3822241 +  -3.9  -3.25823   TGCCGACCTGGCCCA   GGCGCTGAGCGCATCCAG GGG CTGAGAGCGCCC-GCGGC   TTGATATCCGCCGGC  45 1
        trxC 3822793 .. 3822803 +  -5.4  -2.99649   CGGACATTTGCGACC                 TCCT ATC AGGA                 TCTGTATCGCAATGT  49 84
LQF05_RS17850 NONE
LQF05_RS17855 NONE
LQF05_RS17860 NONE
LQF05_RS17865 3824991 .. 3825002 +  -2.2   -2.7185   CACAACCACGGTTTT                TCGG ACTC CTGA                 TGCTTCCACGCTCAT  39 64
LQF05_RS17870 NONE
LQF05_RS17875 NONE
LQF05_RS17880 NONE
LQF05_RS17885 NONE
LQF05_RS17890 3830504 .. 3830516 +  -4.7  -2.94924   CGAACATATCCGCAA                CCGCC ACT GGAGG                CTTTATGCGTAAGGA  45 1
LQF05_RS17895 NONE
LQF05_RS17900 NONE
LQF05_RS17905 NONE
LQF05_RS17910 NONE
LQF05_RS17915 NONE
LQF05_RS17920 NONE
LQF05_RS17925 NONE
        fabG 3837987 .. 3838002 +  -4.6  -2.82516   ACCCGGCAGGTGATC              GCCGTC AACG GAGGGC               TGTGCTGATGAACGG  43 2
LQF05_RS17935 NONE
LQF05_RS17940 3839780 .. 3839828 +  -5.1  -2.73994   TCTGCTGGAACGTTT GCCGTTGCCGTCGAGTCCACTGA ACA TCAGTGACCTCCACAGGAGCGCC TCATGTTCGGCAAGT  43 92
LQF05_RS17945 3840187 .. 3840204 +  -2.5  -3.53012   GGCCTGCGCCAACGG             CGACTGC TCCT GCCGGCG              TTTGACCAGCCAGAC  47 91
LQF05_RS17955 3842496 .. 3842525 + -17.9  -3.53811   ACTGAGCCCGCAATG       CAAAACGCCCCGC TGAT GCGGGGCGTTTCG        TTTCGAGCCGATGAA 100 36
LQF05_RS18015 3860733 .. 3860748 + -11.8  -5.45802   CGCAGCCAAAAAAAA              CCCCGC CTCG GCGGGG               TTTTTCTTTTCAGAG 100 56
LQF05_RS18035 3865690 .. 3865704 +  -4.2  -4.09739   CCGCACCCATCACGC               CCCG ATAATGC CGGG               TTTTCGCGCACTTCC  61 93
        argS NONE
LQF05_RS18045 3868150 .. 3868168 + -13.1  -4.27316   CGCGCTAAATGAAAA             CGCCGGG CATGA CCCGGCG             TTTTCAATTGAACCG  95 33
         ppx 3874338 .. 3874359 + -15.9  -3.37344   GCGCATGAAATGAAA           CAAGGGCCC GCAG GGGCCCTTG            TTCATTCAGTCAACC  89 28
        elbB 3878629 .. 3878646 + -12.7  -5.40072   TCGAACAGACCGTAA             TCCCGGG GCAA CCCGGGA              TTTTTTTGCGCGAAA 100 45
LQF05_RS18090 3879275 .. 3879287 +  -4.8  -2.62184   ACACTCTGCCGAACA                TGGC CATGA GCCA                TCATCTCCACGAGGC  43 80
LQF05_RS18095 3881618 .. 3881640 +  -6.2  -3.61398   CGAACTCGCGCCCGC           GCGGGTCG AGCGCGG CGACCCCC           TTCTTCACCAGCCGG  57 179
LQF05_RS18125 3886469 .. 3886483 + -11.4  -4.03995   CCTTGTCCGGCGCCT               CTGCCG ACG CGGCAG               TCTTTTTCTCCGCCG  81 120
        argH 3896318 .. 3896333 +  -2.4  -3.05463   TCAGGCGCTGCTCGC              CGGCCG CTGA TGGCCA               TTCGGTGACGGGGCT  41 16
LQF05_RS18180 NONE
LQF05_RS18185 NONE
LQF05_RS18190 NONE
LQF05_RS18195 NONE
LQF05_RS18200 3901962 .. 3901974 +  -7.7  -3.51924   ACCTCAATGAATTGC                GCCAT GGA ATGGC                TTATCTGGCTGCAGG  62 49
LQF05_RS18205 3902239 .. 3902253 + -12.8  -2.62184   CCACATCGATGGGAA               CCGGCG GGA CGCCGG               TCCTATAGAGCGGAC  68 69
LQF05_RS18220 NONE
        lysA NONE
        dapF NONE
LQF05_RS18235 3906311 .. 3906325 +  -9.2  -4.17048   CGCAGCCGCCGGCGT               CGGCTG GCG CGGCCG               TTCTTTTCGCGAGCG  79 42
        xerC NONE
LQF05_RS18245 3907977 .. 3908000 + -16.8  -3.22298   CGCCGCTGAAACGAA          GAAGCCCGCT CAAT AGCGGGCTTC           TTCGTGATCCGTGCA  89 54
LQF05_RS18275 NONE
LQF05_RS18280 3914250 .. 3914268 +  -3.1   -3.1585   ATGCCTGCTGACAAG            CGGA-CGC TTTT GCGGTCTG             TGTTAAGTTGCCTGG  45 73
        betT 3916453 .. 3916481 +  -7.4  -3.53811   CTGCTGCGCACCAAA       CTGGCGCAGCAGC TCCA GCTGCT-CGGCGG        TTTCCACGCCCTCGG  60 173
         rep NONE
LQF05_RS18300 3920992 .. 3921009 +  -6.9  -3.14344   GCACCGCCTCCAGTT             CGCGTGC AGCG GCACGCA              TTCGTGGCACGAATG  51 69
LQF05_RS18330 NONE
LQF05_RS18335 NONE
LQF05_RS18340 3930211 .. 3930237 +    -8  -4.09685   CGCCCTTGGATCGGC         GCCGCGAATT GAGCGAG AATGCGCGGC         TTTTCCAGGCTGCGA  71 45
LQF05_RS18345 3931376 .. 3931390 +  -3.5  -3.04144   GCTGGCGATAGATCA              GCACCG GGTG CGG-GC               TGTTGGGCGTGCGCC  42 501
LQF05_RS18375 NONE
LQF05_RS18380 3936540 .. 3936552 +  -3.4  -2.74605   GCTCTGGTATCGGCT                GAAG GATCG CTTC                TGAATTTTCCGACGA  41 10
LQF05_RS18385 3938317 .. 3938332 +    -4  -2.63079   TAGGCTCAGGAATGC              TGC-TGC CAC GCACGCA              TCGCTTCTATAAAAA  40 179
LQF05_RS18390 3939586 .. 3939602 +  -7.2  -3.02144   GCAGGTTGCGCGGGT              CGCGGT GGTAG GCCGCG              TATTGCGCGAGGTGA  50 508
LQF05_RS18410 NONE
LQF05_RS18415 3945014 .. 3945028 +  -3.4  -3.35996   TGGCTCGGCTCGGCC               ACGCCC GAC GGGTGA               TTGTGGGTGAGGATC  47 171
       coaBC NONE
         dut 3947524 .. 3947538 +    -7  -2.64616   GCCTGATCGGCCTCG               GCGCAG CGG CAGCGC               TGCTCTGGCTGGGCC  49 197
        algC NONE
        argB 3950904 .. 3950921 + -12.7  -4.80882   CCCGTACATGAAAAA             GGGGAGC CCAG GCTCCCC              TTTTTCGTGTGCGCT 100 43
LQF05_RS18460 3955031 .. 3955041 +  -2.4  -3.65046   GTTGGTCGACGAAGG                 GGTC CAT GTCC                 TTCTTCAGCTGCCAG  50 314
LQF05_RS18475 3956941 .. 3956960 +  -9.2  -3.72236   AACCTCGAATAACTG            CCAGCAGC CGTT GCGGCTGG             TCTATTTTTTGTCCC  71 29
         gmk 3957694 .. 3957707 +  -3.7  -2.64973   ACTACTCCGTCCGCT               CGCCC ATCC GGGCA                TGCTCTACCGTTACT  40 100
        rpoZ NONE
        spoT 3960253 .. 3960274 +  -4.3   -3.4252   GACGACTGCCGCGGG           TGGCCGCTG CCGG CATCAGCCA            TTATGCTGGCTGCCC  52 107
LQF05_RS18495 3960865 .. 3960905 + -18.4  -2.70932   GCCCCCGGGCGCGCA GCAGCTCGGCCATGCGCTG GGCA CGGCGCATG-CCGACCTGC  TCGTTGGCGGCACGG  87 194
LQF05_RS18510 NONE
LQF05_RS18515 NONE
LQF05_RS18520 3966122 .. 3966150 + -14.6  -3.36273   AGGGTCAGGGCCACC       GCCA-GCGGGCCG ACGC CGGCCTGCTTGGC        TTCGTATTCGCCGGA  84 209
LQF05_RS18530 3969300 .. 3969317 +  -6.9  -2.62396   AGACGCCGCGACAGC             ACGCCGA AGCG TCGGCGG              TACTGTGCCGGGGTC  47 116
LQF05_RS18540 3971701 .. 3971725 + -12.8  -3.06183   AAGGAAAGGATTGAG          GGGAGAGGCG ATGCA CGCCTCCCCC          TTGCGTGACGCTAAG  72 40
LQF05_RS18565 3975924 .. 3975947 + -13.2  -2.78384   CGTCGTTCATGCCCA          GC-AGGCGCTG CAG CAGCGCCTCGC          TGTGCTCGCCGAGCA  68 96
LQF05_RS18580 3979745 .. 3979768 +  -8.1  -3.21099   AACCCCAGGGAGAAC          GC-CGGCTCG CTCGC CGGGCCGCGC          TTGCTGGTGACGCGC  57 351
        glcC 3991465 .. 3991493 +    -3  -2.65116   ACGCATGCAGCCGCC       CGGC-AGCCAGGC GCAT GCTAGACTCGCCG        CTCTTTCCGTCATGC  38 92
LQF05_RS18640 NONE
        ubiA 3993010 .. 3993023 +  -3.1  -3.16742   CAAAACGCCACTATC               GAAGG CAAT CTTTC                TTGCTCCGGCTTGCC  45 42
        phoB 3993830 .. 3993843 +  -5.2  -3.66784   GCATGCGTTCCCAAC               CGCG CACCGT CGCG                TTCTCTTCGGAGTAC  54 54
        phoR 3995181 .. 3995203 + -15.6  -2.52464   CCGACCAGCCGACGG           CGAGGCGGGA ATT TCCCGCTTCG           TCGCTTGAAAAGCCG  78 41
LQF05_RS18660 3996598 .. 3996625 + -11.4  -3.83756   GCCAAGGTGCTGAAA        TATCAGGGCTAGC GTC GCTGGCCC-GATA        TTTACATTCTGCTTT  80 14
LQF05_RS18665 3997769 .. 3997791 +  -4.7  -3.53343   GACGACTGACACGCC           CGGGACGCT CGCTT AGCCACCCG           TTTGGCGCCAGAATT  52 250
LQF05_RS18670 NONE
LQF05_RS18675 NONE
LQF05_RS18680 NONE
LQF05_RS18685 4011496 .. 4011521 +  -3.1  -2.54896   GGCCGTTGGCCAGCC         TGCGCGCCGCC ATCG GGTGGTGACCA          TGAATTGGCTGCCGC  40 3
LQF05_RS18690 4013661 .. 4013674 +  -3.7  -3.61398   CGCCAAGACACTGGC               CGCGC AACG GCGCC                TTATTCGCCACCGAC  51 66
LQF05_RS18705 4016895 .. 4016924 +  -5.6  -3.28745   TCCGCCGGTGCACCA       CGGCGGCCCTCGC GCGGA GCGAGC-CCGGCG       TTGCGTTGTTGCCCG  52 295
LQF05_RS18710 NONE
LQF05_RS18715 NONE
LQF05_RS18720 NONE
LQF05_RS18725 NONE
LQF05_RS18730 4021822 .. 4021847 +  -8.9  -3.45737   GGAACTGGTTGACCA         CGATGCCCTCG ACTT CGAGCGCCTCG          TTGTGGTCGTCCTTC  62 246
LQF05_RS18755 4025866 .. 4025900 + -12.6  -3.20367   CGCCAGCTGATGGCG     CGCGACCGCGGCGGGC TCA GACCGCGGCGGACGGG     TTGATCAGCTTGTTA  74 31
LQF05_RS18770 NONE
LQF05_RS18775 4031323 .. 4031335 +  -2.6  -3.73775   AGAAACAGCTTGTAG                GCGG GGTTG TCGC                TTTCATCCCAGTAGC  52 497
        rpiA 4033664 .. 4033692 +  -2.1  -3.20723   GCTGACCGTCACACA        GCGGCGCCTCTCG CCA CGGGCGACTACGC        TTGAATTGCTGCGCC  43 36
LQF05_RS18795 4034094 .. 4034134 +  -9.8  -3.53224   CGGTCGCCTGATCGC TGGTGCCAGGTGATCGG CTGGTCGT CCGATCACCTGGC-CGG  TTTGCGAAACACGTA  70 30
        serA 4039635 .. 4039652 + -12.7   -4.8622   AGCGGTCGAGTGAAA             GGGAGGC TTCG GCCTCCC              TTTTTCATTCCCGCA 100 49
LQF05_RS18845 4044433 .. 4044453 + -12.6  -4.21194   CGGGATTAATCCATG            GACCGCCT TATTC AGGCGGTC            TTTTACATCATCCGA  95 123
LQF05_RS18850 NONE
LQF05_RS18855 NONE
LQF05_RS18860 4046395 .. 4046408 +  -3.7  -2.52464   CGACCGACCAATGGC               AGCCC ATGG GGGCA                TCCGTTCAGCGCAGG  40 47
LQF05_RS18865 4047143 .. 4047163 + -15.4   -5.0538   CAGAATGTCGAACGA            CGGCCGGG ACGAA CCCGGCCG            TTTTTTGCACTGGGA 100 55
LQF05_RS18870 NONE
LQF05_RS18875 NONE
LQF05_RS18880 4050266 .. 4050293 +    -2  -3.53012   AGGCGGCGAACAGGC        TATC-GTGCAGGG CGT CCTTGAACAGGTA        TTTCACCGCCGCCCC  47 511
LQF05_RS18925 NONE
LQF05_RS18930 NONE
LQF05_RS18935 NONE
LQF05_RS18940 4061209 .. 4061221 +  -6.2  -3.05384   TCAGCTGATCGATCA                CGCC CGTCA GGCG                TTGGCTGAGCAAGGG  49 419
LQF05_RS18955 NONE
LQF05_RS18960 4065793 .. 4065809 +  -4.3  -3.29511   AGCAGCTGGCGCCGC              GGGTGGT GCC GCAACCC              TTATGAGCGAGTCGC  49 3
LQF05_RS18965 4066448 .. 4066496 + -21.8  -3.53091   CCGGCTCAGATGGTC TCCTCGCCG-GCCGCCCCG-GCCG GAT TGGCGCGGGTCGGCATGGCGAGGA TTTCCGGCACCACCT 100 52
LQF05_RS19000 4072965 .. 4072995 + -20.5   -3.9373   CTCGCCGAACGATCG      GAGCCCCGCCCGGC CGAT GCCG-GCGGGGCTC       TTTGGGTTTTGGATA 100 68
LQF05_RS19010 4075082 .. 4075124 +  -4.7  -4.21194   GAGGTGCTTGAGGTA CTTGCGCACCGAGACGCGGG ACAT CCCG-GTGGCGGTCAGCAGG TTTTCGCTGGTGAAA  68 235
LQF05_RS19025 4078893 .. 4078924 +   -21  -3.01712   AGATCGTCGGAAAGT      GAAAAGCCCCGGCC TTGT GGTCGGGGCTTTTC       TGTTCAGCCAACGGG 100 51
        glnA 4086114 .. 4086137 + -16.8   -3.6053   CAGTTCGCGTGACAG          GAAGGCCACC CTCG GGTGGCCTTC           TTCGTTTCTGCCCGG 100 43
LQF05_RS19050 4086806 .. 4086818 +  -3.3  -2.71364   ACCGAAGCCGAGACC                AGCTC CTT GAGCA                TCCTTCGCAAGGTCA  41 16
LQF05_RS19055 4087536 .. 4087563 +  -6.2  -4.09292   GGCTGCAGCATCACA        CCGATCCGCGCCG CAA TGGCGCGC-TTGG        TTTGGTTCTTGCATT  65 120
        glnL NONE
        ntrC 4090153 .. 4090175 + -19.2  -4.06419   CCGACCTGAGACATA           GAACCCCGCC ACT GGCGGGGTTC           TTCTTTCTGACGCAC 100 53
LQF05_RS19075 NONE
LQF05_RS19080 4093707 .. 4093717 +  -3.2   -3.5393   ATCGCCCCGCAGTGT                 GGAG ATT TTCC                 TTTGACCACCATCGT  49 134
        hslV 4094243 .. 4094262 +    -5  -2.71731   CATCGAGGAGCTCGA            CAGCGCGGT CTA ATCGC-CTG            TCGTTCCGGAGTACC  43 13
        hslU 4095632 .. 4095657 + -16.1  -4.57073   CATCCTCTGACCGTC         ACGGCCGTGGC CATT GCCACGGCCGA          TTTTTCCGGAGCGTC 100 31
LQF05_RS19095 4096113 .. 4096132 + -10.7  -3.21912   TTCAAAGTCGTAACC            GCAGGCG CCTCCC CGCCTGC             TTCATGCCTTGCCCC  65 89
LQF05_RS19100 4098509 .. 4098536 +  -6.9  -4.07568   CACGCCGAACTCGCG        GGCCAGGCGTGC GGCAA GCTCGTC-GGCC        TTTTCGCGGGCCGCG  68 252
        ubiE NONE
LQF05_RS19115 4100165 .. 4100178 +  -2.3  -3.01712   ACCTGAATCCAGATC               GCTCC GAAT GAAGC                TGTTCGCCGCCGCAC  41 15
        ubiB NONE
        hisI NONE
LQF05_RS19130 NONE
        tatA 4102814 .. 4102840 + -19.4  -3.12353   AGTCCCTGGCTCGAC         GCGGGCGCGCAG TAG CTGCGCGACCGC         TCTCTCTATTGATGT  90 39
        tatB NONE
        tatC NONE
LQF05_RS19150 4104770 .. 4104782 +  -4.8  -3.78934   GACGGCGGTCAGCGC                CCTG CTGGC CAGG                TTGTTCTAGCGCCGC  57 4
LQF05_RS19155 4105394 .. 4105404 +  -5.4  -2.71712   GGAGCCGGTCCGCCA                 CTGA CAC TCAG                 CTTTCGAGGAGGAAC  46 22
LQF05_RS19170 4107427 .. 4107447 +  -2.4  -3.38046   TGGTCGACCTCGGCA            TCGCGGGC CAGCA GCCAGAGA            TATTTGCGGTCGGGA  45 139
LQF05_RS19200 4113196 .. 4113209 +  -5.3  -2.75039   GGACTGGCCAAACCG               TGACT CAGG AGTCA                TGCTTGGCGTCTGTC  46 137
LQF05_RS19205 4113713 .. 4113743 + -13.9   -3.4252   GCTGCACAAGTAACT       GCTCGGCTGCGCC TGAGC GGCGCAGCCCTGC       TTATCCTGCCTCGGG  86 28
        yrfG 4116057 .. 4116073 +    -8  -3.20227   TCGAAACGCGACCCG              CAGGCA CCGCA TGCCTG              TATTCGTAGTTCAGC  57 136
LQF05_RS19225 NONE
        fdhD 4119592 .. 4119637 +  -6.1  -4.07687   GTCTACAGCCCGGCT GCAGGTGACGGCTGCGCCTG ACCCGCA CAAGCG-AGCTGAGACCTGC TTTTCAGGACCAAGT  65 5
LQF05_RS19235 4120279 .. 4120318 + -18.6  -3.60971   TCTCGTAGCAACCAC  CG-CATCGCCCGGATCGGC CCA GCCGCTCCGGGCGATCTCG  TTTACGCCTTCAGCT 100 65
LQF05_RS19260 NONE
LQF05_RS19265 NONE
LQF05_RS19270 NONE
LQF05_RS19275 NONE
LQF05_RS19280 NONE
LQF05_RS19285 NONE
LQF05_RS19290 4131718 .. 4131731 +  -9.5   -4.8543   GCAGGCAACAAAAAA               CCCGC CGAA GCGGG                TTTTTGTGACCATTC 100 89
LQF05_RS19330 4141747 .. 4141764 +  -4.7  -3.25015   CAGCATGTTGTCGAT             GCGGGCG ATCT CGCTGGC              TTCGTGCTCCTTGAA  49 391
LQF05_RS19340 4143863 .. 4143901 +   -18  -3.14344   GAACAGGGACGCTGG   GGCCGGGCGGGAGCGCGC AAC GCGCCGTCCCGCCGGGTC   TTGATGAGCGCGATC  90 48
LQF05_RS19360 4148434 .. 4148451 +  -7.7  -4.24342   CCGCCTCCTCGCGTG             CCGC-CAG GCT CTGTGCGG             TTTCTTCGTAGAGCG  75 141
LQF05_RS19370 NONE
        rimK 4150650 .. 4150685 +  -8.3   -3.5393   GCTGGTTATAGGGCG    CCACC-ACCTCGCGGA TCAGC TCGGCAAGGTCGGTGG    TTTCCACCGGCTCGT  62 491
LQF05_RS19390 NONE
LQF05_RS19395 4155342 .. 4155363 +  -7.9  -3.65529   CTGTGGTCGAAGCAA           CGCTGCCTC TTGT GAAGCGGCG            TTTCCATCCCCATAT  64 83
        gshA 4157017 .. 4157033 + -10.1  -2.52464   TCAGCCAGACTTATA              GGGCGTC ATA GACGCTC              TAGCTTGAGCGCCGC  60 54
LQF05_RS19405 4158963 .. 4158977 +  -7.8  -4.11371   CCCATGGGCCCGCCT               GCCGTT CAG AGCGGC               TTTTCGAAGATCTTC  71 54
LQF05_RS19430 4165070 .. 4165091 +  -4.3  -3.34398   TGCGCAAAGTTGAAC           CCCGACG GCAGACAA CGCCGGG            TGTTTAACGGCAAGC  49 52
LQF05_RS19435 4167201 .. 4167213 + -10.5  -3.06183   GACAGCCCTGGCTGC                GGCCG ATG CGGCC                TTGGGTAGCGATCCA  63 302
LQF05_RS19445 4169554 .. 4169579 +  -2.5  -4.63218   GCGCGATTCGGGTGA         CTT-CGACGTGC TCC GTTCGTCGGGAG         TTTTGTTACCCGCCG  68 43
LQF05_RS19450 NONE
LQF05_RS19455 NONE
LQF05_RS19460 4175292 .. 4175315 + -18.2  -3.67597   CCCCGCAAAAAAAAA          CGCCACCCTG TTGC CAGGGTGGCG           TTCTTGCATCCGCCG 100 60
LQF05_RS19470 NONE
LQF05_RS19475 4178655 .. 4178685 + -19.8  -3.85817   ACGGCAAGTAGCCCG       ACACAACGCCCGTC CTC GACGGGCGTTGTGC       TTTATGGCAGGCGCT 100 30
LQF05_RS19480 4179988 .. 4180001 +  -3.8  -3.72576   AGCCGGCGCAAGTGA               CCGT CAGCTA ACGG                TTTACTCGCCGCCCG  54 40
LQF05_RS19485 4180129 .. 4180148 + -11.4  -5.18355   GCACCACGATTTGAA            GGCTCGCA GAAA TGCGGGCC             TTTTTCGTTTTTGGC 100 35
LQF05_RS19495 NONE
LQF05_RS19500 4183278 .. 4183317 + -11.5  -2.80113   CTCGCTCAGCCTGAC CCCGATG-GCCGT-GGCCG TTTC CGGCCAATGGCACATCGCG  TCTGCTGCGGTCCTA  64 229
LQF05_RS19510 4184437 .. 4184451 +    -7  -3.08996   CCGATGGGCAGGTCC               AGGCCG ATG CGGCCG               TCTTCGATCAGGATC  51 454
LQF05_RS19570 NONE
LQF05_RS19575 4196341 .. 4196351 +  -3.2  -4.56597   CGATCTGGAGACGTA                 GGCA GGA TGTC                 TTTTTCCCCACCGCC  68 88
        oscA 4203482 .. 4203498 +  -5.8  -2.78547   GGTACTGCAGCTGTC             GC-CCGC GAAT GCGGAGC              TAATTAATCGAGTCA  46 122
LQF05_RS19620 4204665 .. 4204701 +  -9.5  -3.05384   AGTAGGCCTTGGCTT   CGCAG-GGTGGACCAGG CTTCA CC-GGTCCACCGCTGCC   TTCCGTGAGGAAAGC  60 36
        cysT NONE
        cysW NONE
LQF05_RS19635 4207524 .. 4207555 + -11.6  -2.57344   CGACTTGGCCGCGGC      GGGCAACTGTCGCAC CCT GT-CGGCAGTCGCCC      CTTATCGCGAGGCTC  64 73
LQF05_RS19640 4208582 .. 4208605 +  -7.4  -3.54129   GAGCTGGCGCAGGCG          CGCTT-CCAGC AAC GCGGGGAAGCG          TTTGAACCAGGTCTG  60 45
LQF05_RS19690 4221999 .. 4222021 + -17.7  -3.51232   GTGTGATCGCTCCCT           GCGCCCGGC ATATA GCCGGGCGC           TTGCTTTACGGGCCG 100 35
LQF05_RS19695 4223531 .. 4223546 +    -6   -3.1085   GGGGTACGGCGGTCA              CCGGAG GAGA CGCCGG               TCTTCAGTCCATTGA  49 218
LQF05_RS19705 4225807 .. 4225832 + -12.6  -2.71791   TCCGTTAACATGCGA         C-GGCGGGTGG CCAGC CCACCCGCCCG         ATTTCCCGACGACCT  69 71
LQF05_RS19710 NONE
LQF05_RS19715 4227978 .. 4227998 + -11.1  -2.65298   AGGATGGGTGCGCAG            GTGGTCGAG CTG CGCGACCAC            GTTCTCCTCGGTGAG  62 213
LQF05_RS19750 4235665 .. 4235700 +  -9.6  -3.08015   TCTTCACTGTCTTCG    GCGACAGTCGCAGGCT GCGC AGGCTGCGCTTGACGC     TCTTGAGGTGGTTGA  60 309
         zwf 4238559 .. 4238574 + -10.4  -3.41795   ATACACAGAAACATT              CTGCGC GCCA GCGCAG               TTATCATGCGGGTTT  70 498
        ectA NONE
        ectB NONE
LQF05_RS19780 NONE
        thpD NONE
LQF05_RS19790 4243504 .. 4243522 + -13.1  -4.39166   GCTTGCAACACAAAA             CGCCGGG CTCGT CCCGGCG             TTTTGCTGTCTGCGC 100 46
LQF05_RS19795 4243964 .. 4243982 +  -6.6  -3.65351   GCAATCGCCGGGCAA             GCGCAGTA AAA TGCCGCGC             TTTCGATACCCCTGC  60 103
        yegQ 4245419 .. 4245462 +   -13  -2.67803   GCTAGCGCAGCAGCT CGGCGAACTGCTCGGCCGGC ACCG GCGGGCTGAGCAGGTAGCCC TGGATTTCGTCGCAC  68 61
        uvrD NONE
LQF05_RS19815 4251869 .. 4251895 + -12.3  -3.53012   GCGTTGACTGCCCTG         ACGAACGGAGC ACCGG GCTCCGTTCGC         TTTCCAGGACCAGCG  79 34
LQF05_RS19820 4252941 .. 4252956 +  -8.2  -5.04601   GACAGGCCACGATAA              CCCCGT TCCG GCGGGG               TTTTTCGTTTCTGCC  93 78
LQF05_RS19835 4255528 .. 4255546 +  -5.2  -3.58343   AGCTGCTTTAGCAGA             CGCCGG CAAAGCA TCGGCG             TTTCAGCCTGATAAG  54 135
        fdnG NONE
        fdxH 4259592 .. 4259615 + -15.2  -3.12999   CCGCGACCCTGACCG          CGCGGCCCCG TTCG CGGGGCCGCC           TTCGGTGTCCGCTCG  82 29
LQF05_RS19850 4260292 .. 4260309 + -11.3  -3.03243   CAAGCACGCTGGAGA             TTCCCGC CGCT GCGGGAA              TCTTCGCCCGTGCAT  68 48
        fdhE NONE
        selA NONE
        selB 4264633 .. 4264644 +  -2.2  -3.51708   TCAGGCCTGGGGTAG                GCTGG TCG CC-GC                TTCCTTTCCCACATC  47 26
LQF05_RS19870 NONE
LQF05_RS19875 4265411 .. 4265426 +  -4.6  -3.53531   CGTAGGCGCTTTATC              GTCCTC GACA GCGGAC               TTGTGCTCTTGCTCA  52 247
LQF05_RS19880 4266189 .. 4266234 +  -7.4  -3.36492   TTCGGCGATTGCCGG CTGGGCTGCTTCGCCCAGTG GGAAGG CGTCGCGCACAGCAGCCCAG TTCTCGGGTTGCAGG  58 178
        cfaB 4268619 .. 4268637 +  -2.2  -3.66874   GGCATGCCTTTGAAC             AGCGGGCT GCC GGCCAGCA             TTTCCATGCCCTTGC  50 365
LQF05_RS19910 NONE
LQF05_RS19915 NONE
LQF05_RS19935 NONE
LQF05_RS19940 4279925 .. 4279951 +  -8.7  -3.30441   CAAGCGCGGCGCGAC         CGAGGTGCGCA CATGA TGCGCATCTGG         TTGTGGCCGGTGGTG  63 10
LQF05_RS19945 4280448 .. 4280458 +  -8.2  -3.27475   GACCATCACCCACTG                 CCGC GGC GCGG                 TCTTGTCGTCCCCAA  59 315
LQF05_RS19960 4285797 .. 4285810 +  -3.7  -3.86346   CCGGCAGAAGGTGCA               GGGCC GTGA GGCCA                TTTCTGGACCAATGG  56 439
LQF05_RS19970 NONE
LQF05_RS19975 4288529 .. 4288541 +  -3.3  -2.71144   GCAGCGCCGAATAGG                CCCAC AGG GTCGG                TAGTTCGAACACCTG  40 260
LQF05_RS20000 NONE
        recG 4295352 .. 4295375 +  -5.3  -3.14468   TGACAACCATCCGTC         GCCG-CA-GCG TCCA CGCGTGACGGC          TTCGCTATACTCCGG  50 38
LQF05_RS20010 4297135 .. 4297147 +  -2.6  -3.43492   GCGCTCCATCTGCCG                CGCC AGTTC GGTG                TTCTGCTCCATGTAG  47 342
LQF05_RS20065 NONE
LQF05_RS20070 NONE
LQF05_RS20075 4307953 .. 4307977 + -17.1  -5.31519   TACTGAAACGAAAAA          CCCCTCCCGGC CAT GCCGCGAGGGG          TTTTTCTTTGCCTGT 100 49
LQF05_RS20090 NONE
LQF05_RS20095 4310939 .. 4310963 +    -2  -2.89683   GACAAGCCGTTCTGG          CGCTGAAGCG GTTCG CGCTCTAGAG          TCTGTCGCCTAGGCT  40 20
LQF05_RS20100 4311417 .. 4311453 +  -8.5  -4.58395   GATGCAACCGGGCAC    TGGCTCTGGGGCAGGCG TTT CGCTAGCCTTGGCGCCG    TTTTTCCCGGCTACA  81 74
LQF05_RS20105 NONE
LQF05_RS20110 NONE
LQF05_RS20115 4314559 .. 4314574 +  -3.2  -4.11692   CATTCCCAAAAACCC              TTCTGC ATTT GCAGGG               TTTTGCCCATCGGTA  60 499
LQF05_RS20150 NONE
LQF05_RS20155 4325941 .. 4325959 +  -6.6  -3.53012   GGCTCACCATCGCAA             TGCAGCCG ATC CGGTGGCA             TTTCAGGGAACGACG  58 232
        ppnN 4327379 .. 4327399 + -10.4  -5.88471   GCGCCAACGAAAAAG           GCCCGTGGC ATCA GCC-CGGGC            TTTTTTTTCATCCTA 100 55
LQF05_RS20190 NONE
LQF05_RS20200 NONE
LQF05_RS20205 4337052 .. 4337062 +  -3.2  -3.49633   TCGAACTCGGCCTGC                 CGTT CTA GACG                 CTTTTTGAGTTTGTG  49 215
LQF05_RS20210 NONE
LQF05_RS20215 NONE
LQF05_RS20220 4341052 .. 4341070 + -17.4  -4.84527   TCGCGTCGCTAAAAA             GGCCGGGC ATT GCCCGGCC             TTTTTCATATCTGGA 100 52
LQF05_RS20250 4349990 .. 4350012 +  -4.6  -3.68351   CTTCGCCTGCCGATG           CAGGCCGCTC AGC GCGCTGCCGG           TTTCGCTGCTGACCA  55 336
LQF05_RS20260 4350690 .. 4350720 + -21.3  -3.99592   CCCCTCGAAGCGCTC       CGCAAAAGCCCGC TCGCT GCGGGCTTTTGCG       TTTCTGCTGGTCCGT 100 63
LQF05_RS20265 4351114 .. 4351129 +  -4.7  -3.14468   CGCAAGGAGCGACAC              GACCA TGGAAC TGGTC               TTCGATATGGTGGGC  48 42
        tagH NONE
        tssJ NONE
        tssK NONE
        icmH NONE
        tssM NONE
LQF05_RS20295 NONE
LQF05_RS20300 NONE
LQF05_RS20305 NONE
LQF05_RS20310 NONE
LQF05_RS20315 4364783 .. 4364797 +  -3.5  -2.65354   GATCAGCATGTTTAT               TGGCT TTCTT GGCCA               TCAATTTGGAATAAC  40 320
LQF05_RS20320 NONE
LQF05_RS20325 4366474 .. 4366484 +  -8.2  -4.14472   CGTAGGGTGGAAAAC                 CCGC GCA GCGG                 TTTTCCACGTGTTGG  75 36
        phnN 4379643 .. 4379653 +  -2.4  -3.01712   GGCTGTCAGGAAAGT                 GCGC ATG GCGG                 TGTTCGACGGAACGA  41 331
LQF05_RS20405 4381540 .. 4381575 + -16.9  -3.29511   CCGCTCCTTGTAGCA    GCAGGCTTGCCCGCG TCGCCT CGTTGGCAAGCCTGC     TTCTACAGGCATCCC  93 88
LQF05_RS20410 NONE
LQF05_RS20415 4384068 .. 4384092 +   -10  -5.56372   GGTGATCGTTGAGGA         GGGGTGTTCGC GCAG GCGG-CACCCC          TTTTTCTTTTGGTTT 100 51
LQF05_RS20435 NONE
LQF05_RS20440 NONE
LQF05_RS20445 4390351 .. 4390377 + -12.9  -2.53995   GGCGGCCTGCCTCGG         TGCCGGCGGCG AACCC TGCCGCCGGCC         TCCGTTCCAATGGCT  68 61
        yghU 4393246 .. 4393261 +    -9  -3.28712   TGTTCCACATGCGCC              GGACGT GCGC ACGTCC               TTCTCCCCCAGCGCC  63 107
LQF05_RS20465 4394370 .. 4394391 + -12.9  -3.53012   GCGTAATCTGCACCT           CGAGCGGCC CGTC GGCCGCGCG            TTTGCCGAGGGCCGC  79 165
LQF05_RS20470 4394821 .. 4394846 + -11.9  -3.53811   CCGGCAAACGCCCAA         GG-GGGAACGGC AGC GCCGTTTCCACC         TTTCGCACGCCTCAG  74 44
LQF05_RS20480 NONE
LQF05_RS20505 4403094 .. 4403123 +  -6.2  -3.76224   CCATATCCAGCGCAT       CGGCGGCGAGGC CGTCGA GCAACGCCACCG        TTTCATCGATCCGGG  60 395
LQF05_RS20550 4408068 .. 4408101 + -23.3  -3.55761   CGCCAGGAAGTGAAA     CGGCCCTGTCCATCGG TCA CCGATGG-CAGGGCCG     TTTCCCAGGTGCGTC 100 87
         pgm 4411923 .. 4411979 +  -8.7  -3.18582   GGCTCACGCCCCCAC GCCG-GGCTATCGCTGCTGGCGGTC-GC TGAT GCTGACCGCCAGCTGTGC-AGCTTCGAC TTCGTCGGTGAGGTA  61 41
LQF05_RS20580 4413870 .. 4413882 +  -3.3  -3.35679   GGCGGTATAGCTGAA                GAAGC TGC GCTCC                TTGTCGGTCAGCGGG  47 95
        prlC NONE
LQF05_RS20595 NONE
LQF05_RS20600 4417760 .. 4417781 + -15.9  -4.65895   CCGCTGATAAAAAAA           GAACCCGCC GAGT GGCGGGTTC            TTTTTCGGTGCCAGG 100 120
LQF05_RS20610 4420214 .. 4420225 +  -7.2  -3.35344   TTCGTCGTGCCGGGA                CGGC AGAT GCCG                 TTGCTCTGATTTCGC  56 5
LQF05_RS20615 4421219 .. 4421246 + -16.2  -3.32294   GCATTGGCTGTCACT        CCCGGCGGCGCC GCTG GGCGTCGCCGCG         TTGTCGAGGATTTCG  89 57
LQF05_RS20620 4422805 .. 4422818 +  -5.2  -2.84504   GCCGGGAACTAATCG               GGGC GGCCAA GCCC                TCATCTTTCAGGCAT  45 29
LQF05_RS20625 4423154 .. 4423164 +  -2.4  -3.17194   CAGCCCGAGCCAGAC                 ACGC CCC GCGC                 TTAAATTGCGAGAGT  43 11
        coxB NONE
        ctaD NONE
LQF05_RS20640 NONE
LQF05_RS20645 NONE
LQF05_RS20655 NONE
LQF05_RS20660 NONE
LQF05_RS20665 NONE
        cyoE 4431477 .. 4431489 +  -4.7  -3.14344   AACAGGCCACCCAGT                CGCCC AAA GGACG                TTCATGACCCGCATC  48 188
LQF05_RS20675 4432210 .. 4432227 +  -5.5  -2.52464   TGGTTCACGCAGCGA             CGCGC-TG ATG CGTGCGCG             TCGCTTGCGCCACCA  45 107
LQF05_RS20700 4438330 .. 4438342 +  -9.1  -3.35597   TAATAGTGAATGTCC                TGCCG GTA CGGCA                TGTTTGACACCTGAG  64 158
LQF05_RS20710 4439907 .. 4439920 +  -2.3  -3.31144   CGTTGCCATCGAGCA               GCTCG ACAT CCAGC                TTGTCGCAATGCCGA  45 273
LQF05_RS20725 NONE
LQF05_RS20730 4443511 .. 4443534 + -15.3  -3.55761   GAACTCATAACGAAA          CGGTCCGCC TTGCCT GGCGGACCG           TTTCGACGATCCCTG  90 31
LQF05_RS20735 NONE
LQF05_RS20740 4446529 .. 4446542 +  -9.5  -4.17701   CCGGCTAAGCAAAAA               GGCCC CGCA GGGCC                TTTCTACTTTCTACA  79 33
        rpmH NONE
        rnpA NONE
        yidD NONE
        yidC 4470664 .. 4470681 -  -9.8   -4.3586   CGACGGATAGCAAAA             CGCCCC AATCAA GGGGCG              TTCTGCATGGGCGGG  87 48
        mnmE 4468964 .. 4468982 -  -5.9  -3.03624   CCAGGAATGAAACGA             GCAGTGC AGCAA GCACGGC             GCCATCCTCTTGTCG  49 307
LQF05_RS20860 NONE
LQF05_RS20855 NONE
LQF05_RS20850 NONE
LQF05_RS20845 NONE
LQF05_RS20840 NONE
LQF05_RS20835 NONE
        mnhG 4463039 .. 4463049 -  -2.4  -3.92542   CCCAGGCTGAAAGAA                 GCGC CTT GGGC                 AAAATTTGATCAACG  54 353
        mnmG NONE
        rsmG NONE
LQF05_RS20815 NONE
LQF05_RS20810 4458558 .. 4458571 -  -3.7  -3.17051   CCTGCATCAGCAATA               CGCGG AAAG CCGGG                AGGCGATGGAAGGGT  45 194
LQF05_RS20805 NONE
        atpB 4457258 .. 4457268 -  -3.2  -3.65351   CGAGTTCCATGTAAA                 GCTC CTG AAGC                 TAAGGGGGGTTAAGG  51 78
        atpE 4456978 .. 4457012 -  -8.4  -2.54896   GCGGGAGTCAATCCA     CGGCGACGGGGCCCGC CCG GCGAACCCCATCTCAA     ACCGGAAAGTGATTA  52 38
LQF05_RS20790 NONE
LQF05_RS20785 NONE
        atpA NONE
        atpG 4453441 .. 4453457 -  -9.3  -3.54459   TGAACCGTTCTTAAA              CCGCGGC AGC GCCGCCG              ACGATTTCCGAAATT  66 4
        atpD 4451973 .. 4451998 - -14.7  -2.71011   ATGCCTCGGTAATCA         GCCCGACCAGC AGCG GCCGGTCAGGC          TGGATTGGCGCCCGC  77 56
LQF05_RS20765 4451469 .. 4451498 - -13.7  -5.04175   CGAATGACAGAAAAA       GAAAAAGGGTAGC CAAG GCTACCCTTTTAC        TCGTGCGCGATGAAG 100 52
        glmU NONE
LQF05_RS20755 4449304 .. 4449316 -  -6.2  -4.27316   CGGCCGAAGCGAAAA                GCGG TGCGT CCGC                TCAGTTGAGCGTGAG  68 26
LQF05_RS20750 NONE
        glmS 4446529 .. 4446542 -  -9.5   -4.8622   CCGGCTAAGCAAAAA               GGCCC CGCA GGGCC                TTTCTACTTTCTACA 100 65
LQF05_RS20720 NONE
LQF05_RS20715 4439161 .. 4439173 -  -4.8  -3.61398   GTTGCTGCTGAACAA                GAGC GAGGG GCTC                GACGATCCAAGCCGC  55 517
LQF05_RS20705 4437989 .. 4438004 -  -2.5  -3.76224   CGTGCACTCAGGAAA              TCACC GAGCGT GGCGA               CAAGCTCTGGAAGTT  53 260
LQF05_RS20695 NONE
LQF05_RS20690 NONE
LQF05_RS20685 4433387 .. 4433411 - -24.3  -4.17701   TTCAGAAAGCACAAA          GCCGCCGGCCC TTG GGGCCGGCGGC          TGGTTAATCGCTCAG 100 37
LQF05_RS20680 4432133 .. 4432154 -    -3  -3.91897   GGGCGGAGTGAGAAA           CACGA-GCC TGTTG GGCATCATG           GCTCACCGACCGGAT  54 21
LQF05_RS20650 4427258 .. 4427270 -  -3.3  -3.61398   GCCGCTGCTGAACAA                CCCCG ACC CGAAG                CTCTACCCGGCGCCG  51 480
LQF05_RS20605 4417760 .. 4417781 - -15.9  -5.60993   CCGCTGATAAAAAAA           GAACCCGCC GAGT GGCGGGTTC            TTTTTCGGTGCCAGG 100 46
LQF05_RS20585 4413538 .. 4413557 -  -3.4   -3.0263   ACGAGGCGCCGAAGA            TGCCGCAT CAGG AGGCGGCG             CACAGCAACCCGGTG  42 275
LQF05_RS20575 NONE
LQF05_RS20570 4411765 .. 4411785 - -12.6  -3.60792   GGCTGAAGGTGGAAA            CGGCGAAC GGCTG GTTCGCCG            CGCGGCCATCCGGCA  77 169
LQF05_RS20560 4409725 .. 4409743 -    -3  -4.26076   GCATCCGGATGAAAA             GGCTGAGA ACG TCGCAGCA             GATTCGGGCGGGACG  60 76
LQF05_RS20540 NONE
LQF05_RS20535 4405337 .. 4405356 - -10.6  -3.22409   TAACGATTAAGCTAA            GGGCCGGC TTTA GCCGGTCC             CAGTGAGCGAAGCGA  65 65
LQF05_RS20530 NONE
LQF05_RS20525 4404544 .. 4404565 - -12.9  -3.22409   TAACGATTAAGCTAA           GGGGCCGGC TTTA GCCGGTCCC            AGTGAGCGGAGCGAA  74 57
LQF05_RS20520 NONE
LQF05_RS20515 4403470 .. 4403483 -  -2.4  -4.16842   GCTACGCTGAAGAAA               GTGA GATAGG TCAC                CTAGAAGGTAAACAA  60 58
LQF05_RS20510 4402395 .. 4402410 -  -3.2  -4.56597   GTGCCGGCCGAAAAA              CGCAAG CGCG CCTACG               GCCTGACGCCCGTCG  69 479
LQF05_RS20500 4399145 .. 4399177 -    -9  -3.35679   CCTGGTTATTGAGAA      CACGGCGGGACAGC TCAGC GCTGCTGCGCCGCG      CCTTCCAACAGGCCG  63 84
LQF05_RS20495 4398408 .. 4398433 -  -2.4  -3.79747   GGATCGACGACGAAA         CGCCCTGCGC CGACTC GCCCAAGGTG          GGCCGCAAGTAGGCT  52 58
LQF05_RS20490 4397971 .. 4397988 -  -4.8  -2.62184   GGCGGCGCCACACCA             CGACCA TCACCC CGGTCG              CGACCGTTGGCGGGC  43 66
LQF05_RS20485 4397421 .. 4397451 - -12.5  -3.10512   AGCCGGAACAAACGA       GGCCGACACCCCG TAGGG CCGGGCGTCAGCC       CACCCGCCATCCCCC  72 103
LQF05_RS20475 4394814 .. 4394853 -  -7.8  -3.53811   CTGAGGCCCGGCAAA  CGCCCAAGGGGGAA-CGGC AGC GCCGTTTCCACCTTTCGCA  CGCCTCAGCGTTCGC  62 30
LQF05_RS20455 4391765 .. 4391801 -  -7.2  -3.14132   CTGCGGCGCTACGAA   CGCAGCCGTGGCCAGGC GCCT ACCCG-CCACGGTTGAG    ACGGCATCCCGCGCG  54 76
LQF05_RS20430 4387075 .. 4387091 -  -5.8   -3.1211   CATCAGACGACGTAA             CCCGCGC CGTT GC-CGGG              CGCGCCGTTTCGCTT  49 43
LQF05_RS20425 NONE
LQF05_RS20420 4384940 .. 4384968 - -13.2  -5.26316   TGAGCCCATAAAAAA       GACGCACACC-CC ATTC GGTGGTGTGCGCC        AAAGCGTCCCGCTCG 100 48
LQF05_RS20400 NONE
LQF05_RS20395 4379288 .. 4379298 -  -6.8  -3.64703   CGCCGCTGACTGAAA                 GCGT CGA ACGC                 CTGTTGGCGTTGATC  59 133
LQF05_RS20385 NONE
        mdcA NONE
LQF05_RS20375 4375095 .. 4375107 -  -3.3  -3.41222   GGCGAATTCGAAAGA                CAGGG TTT CCATG                TTCAGTTGCTCCCAG  47 27
LQF05_RS20370 4374810 .. 4374821 -  -2.2  -2.69799   TTAGCGGACACATCA                GTCA TGGC CGAC                 CTCCTCCAGTCCCTG  39 11
LQF05_RS20365 NONE
        mdcE NONE
LQF05_RS20355 4372453 .. 4372484 -  -4.2  -3.57144   GCCCTGACCGGGAAA      GGCGAACAGGCTGC TCAT GCGGCCCGCTCCGC       AGCCCAGGGATCGCT  54 8
        mdcH NONE
        madL NONE
        madM 4370171 .. 4370201 - -19.1  -3.14211   ACCTTCCTTGATGAA      CGCAAGCGCGCCCC GATG GGGGCGCG-TTGCG       GATGACGGTGAGTGA  91 54
LQF05_RS20335 4368085 .. 4368129 - -15.8  -2.78384   TCTCCCGCTAGCACA TCGATGCGCG-CCACTGGCCA GCTG TGGCAAATGGTCGCGCATCGC AGGTGACACCCTGCC  79 123
LQF05_RS20330 4366473 .. 4366485 -  -4.7  -4.09864   ACGTAGGGTGGAAAA                CCCGC GCA GCGGT                TTTCCACGTGTTGGC  61 120
LQF05_RS20255 4349306 .. 4349318 -  -4.7  -3.57387   AAGAGATGGTCGAAA                CCCGC CAG GCCGG                CTACCAGTTCATGTC  55 421
        gabD 4347428 .. 4347460 - -12.7  -3.41602   CTGACCGCAGGAGAA      CGCGACAGCCAGCCC CTG AGACCGACTGTCGCA      GGGCGTCAGATGCCC  76 31
LQF05_RS20240 4346022 .. 4346037 -  -8.2  -4.17048   TTCGGGCGAAAAGAA              GGCGCA GCAC CGCGCC               ACGCAAGGGCTGGCG  75 101
LQF05_RS20235 4343773 .. 4343801 -  -7.2  -2.52464   TGCGTTCGGAATGCA        GGTCGGCGGGGC TCACT GCCCGGCCTGCC        ATTCGGTAAAGGTGC  48 9
LQF05_RS20230 NONE
LQF05_RS20225 4341348 .. 4341365 - -12.7  -5.24129   TCGGGCCATAAAAAA             CCCGCTC CTGA GAGCGGG              TTTTTCATGCTGCAG 100 50
LQF05_RS20195 4333502 .. 4333515 -  -3.7  -4.09685   CGCCACCCCGGAAAA               GGAGC GTGA GCACC                TGATGGCGGCGCTGG  62 323
LQF05_RS20185 4330946 .. 4330968 -  -5.6  -4.08767   CTCAGCCCTCTAAAA          CCACATGCC CAACCC GGCATG-GG           TTGGCCGCTTGAATT  65 282
        rpmB NONE
        rpmG 4330486 .. 4330501 - -11.8  -5.42514   CCATAAACGAAAAAA              CCCGCC GTGA GGCGGG               TTCTTCCTTCAAGGG 100 49
LQF05_RS20170 NONE
LQF05_RS20165 4327378 .. 4327400 -  -6.9   -4.8622   CGCGCCAACGAAAAA          GGCCCGTGGC ATCA GCC-CGGGCT           TTTTTTTCATCCTAC  85 52
        polA 4321447 .. 4321481 -  -7.3  -5.81412   TCCAGGCAAAAAAAA     CCTCGAACTTC ATTGGGGGAGGGG GAAGTTCGAGG     TCGAATCCGGACCGC 100 195
LQF05_RS20140 4320563 .. 4320591 - -15.4  -5.00616   GTGCTTCGCAAAAAA       GCGTTCGGCCAGG TGAG CCTGGCCGAA-GC        GGGACCGCGGCGAAT 100 40
        tssI NONE
LQF05_RS20130 NONE
LQF05_RS20125 NONE
LQF05_RS20120 4313785 .. 4313834 -  -7.7  -3.63515   CGCCAGCCTGAACAA GGCTGACGGCGC-GCTGCAGGAAA TCC TCGCCAGCAGCGGCTACCTCAGCC GCCCGGCCGAACTGC  63 365
LQF05_RS20085 4308611 .. 4308641 -  -3.9  -3.71284   GCCTCAGCAACAGAA      TGGCGCGCA-GCTT AGCC ACGCCTGCGCACCG       CACCCAGCCCCTGAC  54 95
LQF05_RS20080 4307953 .. 4307977 - -17.1  -5.00138   TACTGAAACGAAAAA          CCCCTCCCGGC CAT GCCGCGAGGGG          TTTTTCTTTGCCTGT 100 47
LQF05_RS20060 4304811 .. 4304825 -  -2.8  -4.11484   GCGAAGCGCGGAAAA               CAGG CAGTCAT CCTG               CGACCGATGCGTCAA  57 77
        gspE 4302869 .. 4302880 -  -7.2  -3.01791   AGGCGGTCTCCAACA                GCGG CGAT CCGC                 GGTCGAGAGCGCCTC  52 148
        xcpS NONE
        gspG NONE
        gspH NONE
        gspI NONE
        gspJ NONE
        gspK NONE
        gspL NONE
LQF05_RS20015 4296564 .. 4296587 -    -3  -3.62597   GGCATGCCCGAAGAA          CTGGCGGCCGC CCT GCG-CTTCCAG          AACGACCCGGGCTAT  51 294
LQF05_RS19995 4291331 .. 4291368 -  -9.2  -3.22475   CGCACCGCCAGAACA  CGAGCGCAA-CGGCGGCT GACT AGT-GCCGATTGCGCCCG   AGCGAGGCATAGCCG  61 7
LQF05_RS19990 NONE
LQF05_RS19985 4289371 .. 4289411 - -17.6  -5.08601   CCACCTTAACAAAAA CTTCGCCGAACCGAGAGCG CAGG CGCCC-CGGCTCGGCGCAG  TACGTCAGTGCAGCG 100 30
LQF05_RS19980 4287901 .. 4287938 -  -6.1  -3.28712   GGCGGGTGCCGACAA   CCTGCGCGCCCTGCACAG CGA CC-TGCTGAGCGCGGTGG   ACGGCGAATTCGATC  51 452
LQF05_RS19965 4285436 .. 4285447 -  -7.2  -3.33696   CGCGCCGTGAATTAA                GCCG ATGG CGGC                 ATCAACGCCCGGCAA  56 77
LQF05_RS19955 4282912 .. 4282922 -  -2.4  -2.62263   AGGGCGCTCATAGCA                 GCGG CAC CCCC                 AGCAGACTGCGGCCT  38 7
LQF05_RS19950 NONE
LQF05_RS19930 NONE
LQF05_RS19925 NONE
LQF05_RS19920 4274036 .. 4274050 - -11.4  -2.71712   GTCGCCTCTGCAAAC               CGTCGC AGC GCGACG               CCATGTAGCATAGGT  65 108
LQF05_RS19905 4269417 .. 4269427 -  -6.8  -2.56164   TCGGGAACGACGAAG                 GCCA GAC TGGC                 GAGCCGGGCTGCCGA  49 42
LQF05_RS19900 4268222 .. 4268263 -    -5  -3.21416   GATTCTGACGACCAA GC-CGCTGCC-GGACGGCTC CCAC GAGCTGCCCTGGACGCGCGC CGACCTGTACCGCTG  48 92
LQF05_RS19890 NONE
LQF05_RS19885 4266032 .. 4266058 -    -6  -3.06696   TGGCGCCGGAAGAGA        CTTGAACGCTG TCATCG CAGC-TTCAAG         CGCTTCATGTTGAGG  49 78
LQF05_RS19830 NONE
LQF05_RS19825 4253006 .. 4253031 -   -19  -5.75342   GCTGCGCAAAAAAAA         CCGGCCGCGG AGCAAA CCGCGGCCGG          CACAGCGACGCATCC 100 43
LQF05_RS19805 4245173 .. 4245183 -  -8.2  -4.81249   GGTGAAAGTGAAAAA                 CCGC TTC GCGG                 TCGGCGACAGGCTGG  91 247
        hexR 4235625 .. 4235635 -  -8.2  -3.14564   TGACGCGTCCATGAA                 GCCG CCG CGGC                 TCACTCCTCGTGCGT  57 26
LQF05_RS19755 4234842 .. 4234858 -  -3.6  -3.54424   GCCCAGGCGGTGAAA              CGCCTG TCGGT CAGCCG              TGACGACCTGCTGAT  49 493
LQF05_RS19745 NONE
        oadA 4230817 .. 4230833 -  -9.4  -5.40072   CTGGCTCGAAAAAAA              GGAGCC ACTGG GGCTCC              CAAAGGGGACACATT 100 138
LQF05_RS19735 NONE
LQF05_RS19730 NONE
        glsB NONE
LQF05_RS19720 4227686 .. 4227712 -  -6.5  -3.86194   AACCGTCTGCAGAAA         GCCCTCGACGA GGTGA TCGCCGAAGGT         TACGCCGGCTGCAGC  64 108
LQF05_RS19700 4223325 .. 4223360 -  -3.3  -2.66964   CGATCTACGACAGCA   GCAACGAG-GAGT-GAG GACG CACGACTCACTCGATGC    CGAACAGCCCGTTCT  40 15
LQF05_RS19685 4219378 .. 4219400 -  -3.4  -5.02074   GCACCCCTCAAAAAA           GTTGCCGCTT GTT AAGCAACAAA           ACTTTGCCGTTGGCG  80 119
LQF05_RS19680 NONE
LQF05_RS19675 4214522 .. 4214578 -   -10  -3.27475   GCGGCGATCATAACA TCGCCACCGCAGCGGCGGAC-TACGGC CTTG GCCGCATGCCCGGCGCGGCGATCAGGA CGCGCTGGCCAGGCT  68 20
LQF05_RS19670 4211850 .. 4211867 -  -8.4  -4.57882   GTCAATAACAACAAA             CCACGC AAAAGA GCGTGG              CCTGGATGGGCGCGA  79 121
        purE 4211246 .. 4211261 -  -2.4  -3.26947   CAATTTTCATATCAA              CGGCCC TTCT AGGCGG               CAGATTCAGCGCGCG  43 78
LQF05_RS19660 4210111 .. 4210147 - -10.6  -2.60244   TGGGTAACCAATGGA    CCGGAGGGCGCCGTCG CCGTT CGCCGGCGCCGGACGG    TCGGCCGTCAGGAAT  60 33
LQF05_RS19655 4209789 .. 4209811 - -18.4   -3.2375   TACGTGAGAAGGGAA           CGGGGCCGCA GGG CGCGGCCCCG           CGGCGGGTCAGTGCT  90 33
LQF05_RS19650 4209235 .. 4209249 -  -2.8  -3.02144   GCACGCGGTTCAATA               GTCG TCTTCTT CGAC               CAGTTCGACCGCCGC  41 5
LQF05_RS19645 4208244 .. 4208277 -  -8.2  -3.21099   CCTGGCGACCATGAA    GCCGCGCGCC-ATGCT GATC AACACCGGC-CGCGGC     GCGCTGATCGACACG  59 300
LQF05_RS19610 NONE
LQF05_RS19605 4201243 .. 4201258 -    -6  -3.67141   AGAACTCCATGCAAA              GGCGCC AATC GGCGCA               TCACTTCGGGTGGCT  57 144
LQF05_RS19600 4200344 .. 4200354 -  -4.6  -2.57132   TGCGGCCTTCAGAAC                 GGCA CGT CGCC                 CTGGATCGTCGTGCG  43 8
LQF05_RS19595 NONE
LQF05_RS19590 4198344 .. 4198354 -  -2.4  -2.71712   CCGTGCGGGGGAAAG                 GCTC ATG GTGC                 ACGCTCCTCAGTAGG  39 33
LQF05_RS19585 4197453 .. 4197465 -  -6.2  -3.14878   TGTTCGAATCGAATA                GGCG GATCG CGCC                GCGGCGAATGCGGCG  50 43
LQF05_RS19580 4196015 .. 4196043 -  -6.6  -5.00884   AGCGCCTGGAAAAAA       CCGGCGCTGACCG CCGC CGAAC-GCGCCGA        GGTGGCGTTGGCCAT  91 367
LQF05_RS19565 4192329 .. 4192357 - -12.4  -3.45324   CACTTGGATGAAATA       CCT-TCCGGCCCG TTGG CGGGCCGGTCAGG        AGATGTCACAACTGG  79 50
LQF05_RS19560 NONE
LQF05_RS19555 NONE
LQF05_RS19550 4189574 .. 4189591 -  -4.3  -4.63592   TTGGAATAAAAAGAA             TAAATAA CGAT TTATTTA              TAATTTTTAGAGATA  73 188
LQF05_RS19545 4188840 .. 4188858 -  -5.2  -3.64703   TGCCGGCCAGGGAAA             CGACCATC ATC GGTGATCG             TCCTCGCTCAGCGGT  54 33
        ssuE 4188193 .. 4188220 -  -7.6  -2.53911   CGAATTGGGAAGCGA        CCTGCTCACCCG TTGG CGGGGGAGTAAG         GCGGGGTGAAGCGTC  52 61
LQF05_RS19535 NONE
        ssuD NONE
        ssuC NONE
        ssuB NONE
LQF05_RS19515 4183939 .. 4183991 - -10.4    -3.452   GGTAAAGATCCACAA GAAGGACGGCACCCTGCAGGAAGA GCGCA CCTACCCGCGCAGTGCCGACCCTC GTGAGAGTAAGGGCT  70 61
LQF05_RS19505 4182827 .. 4182874 -  -8.2  -4.10453   CAAAGGCGGCGAAAA CTGTGGCGGTTGCGCCCGCCGC GGTC GCGAAGGCTGCAACCGCTGCAA CCGCTGCTCCCGCTG  72 246
LQF05_RS19490 4179974 .. 4180017 -  -5.3  -3.61894   AAGCGGCCTGAATAA GCCGGC-GCAAGT-GACCGTC AGCT AACGGTTTACTCGCCGCCCGC AATGGATATAATGGC  57 279
LQF05_RS19465 4175292 .. 4175315 - -18.2  -6.06723   CCCCGCAAAAAAAAA          CGCCACCCTG TTGC CAGGGTGGCG           TTCTTGCATCCGCCG 100 44
LQF05_RS19440 4166477 .. 4166522 -   -11   -3.2614   CACGCTGCATACCAA CGACGCGCCCAGTGCCATCA CCCGCC TGCTGGAGCTGGGCGTGCCG CACTACCTGCTCAAG  68 525
LQF05_RS19425 4162878 .. 4162901 - -11.7  -3.04203   TGAACCCAGAAAGGA          CGCTGGCGC CTCAGC GCGCCAGCA           ATTGTTCCAGACGGT  68 12
LQF05_RS19420 4161542 .. 4161561 - -16.4  -4.55128   ACCCGCAAACGAAAA            CGCCCCGC CGAG GCGGGGCG             TCGATCGCGTCGGCT 100 45
        argE NONE
        argA 4158942 .. 4158961 - -16.4  -4.19817   TGCACTGACGGAAAA            GGCGGGCC CATG GGCCCGCC             TGCCGTTCAGAGCGG 100 32
        ompR 4151545 .. 4151559 -    -7  -4.72272   GGTCTTCATGAAAAA               GCGGCG GCA CGCCTC               GGGCTGCGGGTAACG  78 81
LQF05_RS19380 4150145 .. 4150192 -  -2.7  -4.18506   GTACCTGGAAAAGAA CGGCGG-CCC-GCACCTGACCC GCACCAA GGGCAAGG-GCTGAGCCCACCG CGCTGCGAGCCGGCT  60 40
LQF05_RS19365 4147880 .. 4147905 -  -7.5  -3.14132   CGTGCTGGTGACCAA         GCTGGCCGGCCA CTT CGGCTGGC-AGC         ACGCCAGTCCATCGC  55 435
        hslO 4146300 .. 4146332 -  -2.1  -4.72333   AACTACATCGAAAAA     GTGC-GCGCGATTAT GCCAG ATAAT-GCGCCGCGC     TGGGTATGAGGCCGT  68 137
LQF05_RS19350 4144642 .. 4144657 - -11.8  -5.04601   TGCATAAACGAAAAA              GCCGCC CGAA GGCGGC               TTTTCGTTGACTCGG 100 49
LQF05_RS19345 4143531 .. 4143552 -  -7.9  -2.64462   AACAAGCACAAGCGA           CGCCGGGTC AGGT GATCCGGCA            GGCAAAAACAGGACG  52 388
LQF05_RS19335 4141224 .. 4141241 -  -4.7  -3.64703   GTCTGGCCAGCGAAA             TCCGCGC AGTG GCGCAGC              ACATCGAGGCGCAAT  55 162
LQF05_RS19325 NONE
LQF05_RS19320 4137080 .. 4137090 -  -6.8  -2.95388   CACCCAACCCAGACA                 CTCG CGA CGAG                 TAGTGGCAATACGCC  51 320
LQF05_RS19315 NONE
LQF05_RS19310 4134670 .. 4134682 -  -3.3  -2.81133   GACGTACCTACTAGA                GTTCG AGG CGTAC                GCGGGGTCGAGGTTC  41 63
LQF05_RS19305 NONE
LQF05_RS19300 4133481 .. 4133491 -  -6.8  -3.75332   ATCTGGCAAGCCAAA                 GCGA CTC TCGC                 CGCCTTGCAACTGTG  63 75
LQF05_RS19295 4131948 .. 4131975 - -12.8  -4.56597   TGTTCCGCTGAAAAA        GCAAAAACCCGC CGAG GCGGGTTTTTTC         TGACCGGTCCGAATT 100 253
LQF05_RS19255 NONE
LQF05_RS19250 NONE
LQF05_RS19245 4120813 .. 4120832 -  -4.2  -3.42147   CGCAATGAAGAGGAA            GACTGGCT CAGT AGGCAGCC             TGATAGATCGCCAGC  52 13
LQF05_RS19240 4120278 .. 4120318 - -15.3  -2.77899   GTCTCGTAGCAACCA  CCGCATCGCCCGGATCGGC CCA GCCGCTCCGGGCGATCTCG  TTTACGCCTTCAGCT  77 57
        nudE NONE
        cysQ 4113712 .. 4113744 - -10.4  -2.66274   TGCTGCACAAGTAAC      TGCTCGGCTGCGCC TGAGC GGCGCAGCCCTGCT      TATCCTGCCTCGGGC  60 50
LQF05_RS19195 4110009 .. 4110020 -  -2.2  -4.07687   ACCGCCGGCGGAAAA                GCGCC GAC GG-GC                CAGCCACTTACATCA  57 33
LQF05_RS19190 NONE
LQF05_RS19185 NONE
        bamE NONE
LQF05_RS19175 4107169 .. 4107197 -  -8.7  -2.55213   GATCGATGCAACCTA        CCCGGACCGCGGT CAT ACCGAGGCGCAGG        TCGCGCTGACCGGTG  53 164
         pip NONE
         dtd 4105241 .. 4105257 -  -7.9  -3.14132   TGCGGTGCTCAGCAA              TGCGCTC AAG GGGCGCA              AGCCGCTACGCACCT  55 169
LQF05_RS19105 4098188 .. 4098206 -  -5.2  -3.53563   ACATTTCCCTGCAAA             CCGCCACC GCC AGTGACGA             GACGGCGCGCGCCAG  53 139
LQF05_RS19070 4090153 .. 4090175 - -19.2  -3.00022   CCGACCTGAGACATA           GAACCCCGCC ACT GGCGGGGTTC           TTCTTTCTGACGCAC  90 59
        thiI 4082873 .. 4082894 -  -2.9  -3.08679   TGCTGCCACCCAATA           GCCCCGGCTG TTT CA-CCGATGC           GTCAGGCCGGACGAT  41 27
        typA 4080861 .. 4080892 - -19.6  -4.07568   CGGCGTGCGTGAAAA      CGCAAAAAGGCGCC CGAA GGCGCCTTTTTGCA       GTTTCGCAACGGGGA 100 41
LQF05_RS19030 4078898 .. 4078919 - -12.9  -4.35524   GTCGGAAAGTGAAAA           GCCCCGGCC TTGT GGTCGGGGC            TTTTCTGTTCAGCCA 100 49
        dcuS NONE
LQF05_RS19015 4074874 .. 4074894 -  -4.7  -3.72576   GGGTGCGCCAGTAAA           GCCA-CCG CCGCCC CGGCTGGC            CATGCCGCGGGTCGG  57 87
LQF05_RS19005 4072775 .. 4072799 -  -7.7  -3.68302   CGAAGACGCCAACAA          GGCCCGCGACC TTC AGCAGCAGGCC          AACGAGAAGATGCTC  63 308
LQF05_RS18995 NONE
LQF05_RS18990 4069482 .. 4069516 -    -5  -4.11216   TCCTCACTGGGAAAA   GGCCGGCAGTGTGCGCC TTCG GGCGC-C-CTGC-GGCG    AGCCCGATCAGCCTT  61 33
LQF05_RS18985 NONE
LQF05_RS18980 4067564 .. 4067575 -  -2.2  -2.52464   GGCCGCGGCAAGGCA                CG-GC CCG GCGCG                ACGGCTCACTTGCCC  37 31
LQF05_RS18975 NONE
LQF05_RS18970 4066235 .. 4066250 -  -2.4  -4.78029   CGAAGAAAAGGAAAA              GGGCGA ACAT CCGCTC               GAGCGCCTGATGGCC  74 213
LQF05_RS18950 NONE
LQF05_RS18945 4060554 .. 4060585 -  -3.5  -3.65812   CCGCCTCGAACAGAA      CGCGCCGC-GCCTG GTGGA CTGGCTGCGCCGCC      GCTTCATCGCCCCGA  51 278
LQF05_RS18920 NONE
LQF05_RS18915 NONE
LQF05_RS18910 NONE
LQF05_RS18905 NONE
LQF05_RS18900 NONE
LQF05_RS18895 NONE
LQF05_RS18890 NONE
LQF05_RS18885 4049722 .. 4049749 -  -3.2  -3.70902   TGTTCGACATGGAAA        GCTTCCGCGCCC AGCT GGGCCTGGATAC         CCGCCCTTACGCCGA  54 57
LQF05_RS18840 4041723 .. 4041735 -  -3.4  -2.62184   CTCTCCCCCAGATGA                GTAC AAGGG GTAC                GACCGACCACGCGGC  40 66
LQF05_RS18835 4040605 .. 4040625 -    -9  -3.03972   TTACAAAACATGACA           TGC-CCGCC AGGC GGCGGCGCA            GAGCGGCCGCTACGA  60 35
LQF05_RS18830 4040094 .. 4040123 - -16.5  -3.62096   CGGCAGGACGCGAAA       CGACCCGG-AAGCC AGA GGCTTGCCGGGCCG       TCGTGCTGTTCGCGG  93 43
LQF05_RS18825 4039635 .. 4039652 - -12.7  -3.64822   AGCGGTCGAGTGAAA             GGGAGGC TTCG GCCTCCC              TTTTTCATTCCCGCA  82 67
LQF05_RS18815 NONE
LQF05_RS18810 4036064 .. 4036086 - -17.7   -3.6512   CAAAGAAGCGGCAAA           CGCGGCGGG TGAAT CCCGCCGCG           TCGATGGATCAGAGC 100 34
LQF05_RS18805 NONE
LQF05_RS18800 4034070 .. 4034085 -  -2.5  -3.78775   CCCTGCAGGACGAAA              GCG-CC TCGCC GGTCGC              CTGATCGCTGGTGCC  52 63
        ilvA NONE
LQF05_RS18780 NONE
LQF05_RS18765 4028135 .. 4028156 -  -2.1  -2.57344   CACTTCCTGGACAAT           CTTGCGCAG CGTG CCGAGCATG            CTCAGAGGCTTTCTC  38 50
        ptsP 4025508 .. 4025547 -  -3.5  -2.61274   GCGAGCCCAAGGAAC  TGCAGCCCGGCGTC-TAC GGCCT GTCCAATGCCGGGCTGGA  TACGCCCTGGCCCAA  39 360
LQF05_RS18750 NONE
         lgt 4023322 .. 4023362 -    -7  -2.54568   GCGAATAGTAAAAGG CGACGCCCGGCTTGTCGC GTGTGCG GCGACAAGCCGGA--TCA GATTCAGGCCGGTGC  49 29
LQF05_RS18740 4022456 .. 4022471 -  -3.2  -3.53091   ATCCGCGGCGGCAAA              CCCGAC CAAA GTCAGA               CGGCAACGGGCGCCT  49 21
LQF05_RS18735 4021223 .. 4021240 -  -2.5  -4.48987   CCGCGAGAACGAAAA             CCGCGCG ATCT CCCTCGG              CTACACGGTGTCGCG  67 392
LQF05_RS18700 NONE
LQF05_RS18695 4013636 .. 4013670 - -10.7  -3.14132   CGGGCCGCGCAGCAA    TCGCTGCGCGCGCCAA GACA CTGGC-CGCGCAACGG     CGCCTTATTCGCCAC  65 30
        glcD NONE
        glcE NONE
        glcF NONE
LQF05_RS18615 NONE
LQF05_RS18610 3983845 .. 3983872 - -16.2  -3.55444   CGCTCATGCTCGAAA        GCCCCGGGCGCC GTTG GACGCCTGGGGC         TCCTGTCCTCACCGC  93 81
LQF05_RS18605 3981971 .. 3981990 - -16.4  -4.61873   CTGCACAAATGAAAA            CGGGCGGC CTGG GCCGCCCG             TCAAACTACCGCCTG 100 43
LQF05_RS18600 3981726 .. 3981739 -  -3.1  -3.27525   GTTGGCGAAACGGAA               TCAGCC GAT GGC-GA               TCATTTCGAAGTCCA  47 12
LQF05_RS18595 3980407 .. 3980423 -  -9.4   -3.7941   TACTGTTCACAAGAA              CAGCGC TAAAG GCGCTG              CAACAGCTCTAGGCT  71 108
LQF05_RS18590 3980019 .. 3980060 -  -9.4  -3.16039   AAGGACGGGTACGAA CGGGTCCGGGGAAGACCAG TCGGT CAGGT-TTACCCGGAGCCG ATCGGCTCCGGGTCG  61 49
LQF05_RS18585 3979535 .. 3979558 -  -8.1  -3.95073   CCGGACATCCAGAAA          TGAGCGCGC CGAATC GCGGGCTCA           GGGCGACACTACTTC  69 34
LQF05_RS18575 3977128 .. 3977156 - -11.1  -3.18582   TATTGGATGGAGCAA       GCA-CCCTCTCC TTCCTG GGAGAGGGGTGC        AGTTTCAGAAGAACG  69 30
LQF05_RS18570 3975775 .. 3975794 -   -10  -3.21099   CTTCGGCACCATCAA            CGCGGC-CA ACC TGCGCCGCG            CCCATGCCCTGCTGG  65 102
LQF05_RS18560 3973771 .. 3973783 -  -5.5   -3.8969   GTACGCAGATAAGAA                TAGCC AAG GGCCA                TAAGAGTTCAGGCCG  62 33
LQF05_RS18555 NONE
LQF05_RS18550 NONE
LQF05_RS18545 3971539 .. 3971566 -  -8.4  -2.72344   GGGCATCCGCAATCA        GGCGCAGCTG TTCGGCGG CAGCCACGCC         CAGCGTGACCTGATC  53 195
LQF05_RS18535 3969222 .. 3969256 - -14.8  -2.57564   TGAGTCGGGTATAAC     CGGGTGCCGGCCGCTC AGT GCAAGGCCGGCGCCCG     CTCCTCCTGCAGCGT  76 5
LQF05_RS18525 3965625 .. 3965640 -  -4.6  -3.53091   AGCCGCCCGCCGAAA              GCCAGC ACCC GCTGGG               GCAGAAGCTCTTCGC  53 359
LQF05_RS18505 3961304 .. 3961317 -  -3.7  -3.14132   CGTGCCGCTCATCAA               CCGGG CTTT CACGG                TTTCACCTTCAGCAG  45 20
LQF05_RS18500 3960243 .. 3960264 -  -7.1  -2.64616   TGTCCACTCAGACGA           CTGCCGCGG GTGG CCGCTGCCG            GCATCAGCCATTATG  49 498
         rph NONE
LQF05_RS18465 3954367 .. 3954385 - -10.2  -3.31792   CCACTATCTGGACAA             GCAGCGCC GCA AGCGCCGC             GAGTACATCTACTGC  67 456
        pyrE NONE
LQF05_RS18450 3952550 .. 3952562 -  -9.1  -4.60041   ATTCATCCGGAAAAA                TGGCG AAA CGCCA                TTAATGCGTCGAGAT  85 86
LQF05_RS18445 3950904 .. 3950921 - -12.7   -4.8048   CCCGTACATGAAAAA             GGGGAGC CCAG GCTCCCC              TTTTTCGTGTGCGCT 100 47
        radC NONE
LQF05_RS18405 3941432 .. 3941457 -  -8.2  -3.85698   CCGCGGCCGGACAAA         CTGAAGGCGC CACCGC GCGCCTCCGG          TCGCCTCGATAACTA  69 38
LQF05_RS18400 3939668 .. 3939718 -  -5.4  -3.19642   ACCAGTAGCCAGCAA GCTTAGTCGCTCCCTGGCCC-GTGC AGCT GCACAGGGCCAG-G-GCGATCGCGC CAACCTCGGGATCGG  50 43
LQF05_RS18395 3938613 .. 3938631 -  -8.8  -3.62096   GCGCATTACGCGAAA             GCCATCAG GAA CTGCTGGC             CCGGCTTCGCGAAGG  65 504
        dadA NONE
LQF05_RS18365 3932794 .. 3932825 - -15.1  -3.29558   TCAGAATTTACAACA      CGCGTACCGGGCG GCTCGT CGCGCGGCACGCG       GCCGATGGTCAGAGT  86 34
LQF05_RS18360 3932077 .. 3932093 -  -9.4  -2.78384   GCGGCGGTCAGTATA              CCGGCA AGCCA TGCCGG              CTGAAACAATACGAA  57 105
LQF05_RS18355 3931542 .. 3931571 - -14.3  -3.85698   TGCTCCCTTCAGAAA       CGACAAAGCCGCC CGGA GGCGGCTTTGCTG        ATGACGCGGCGCTCG  93 42
LQF05_RS18350 3930633 .. 3930645 -  -4.8  -2.77899   TTCGTTCACCAAGCA                GGTG GAAAG CACC                ATCGCTGTATCGACG  44 298
         gap NONE
LQF05_RS18320 3924609 .. 3924625 - -12.3   -5.4505   GGCGTCAATAAAAAA              CGAGACC GAT GGTCTCG              TTTTTATTCGTTGCG 100 56
LQF05_RS18315 NONE
LQF05_RS18310 3921756 .. 3921777 -  -9.3  -3.13403   GTCGTTCGATGAAGA           TGGACGCCC CACA GGGCGCCCG            GGAGTGTAGCGACCG  61 70
LQF05_RS18305 3920688 .. 3920705 -  -9.1  -2.57468   CTGCAGGAGATCAAG             CCGCGCT CCGA AGCACGG              GTGCTGTCACTGGTG  55 256
LQF05_RS18290 3916031 .. 3916056 - -10.4  -2.64973   ACGAAGTGGAGATCA         GCGAAGGCGA AGACCG TCGCCTGCGC          TTCGAGATCACCCAC  58 314
        glnK NONE
LQF05_RS18265 NONE
LQF05_RS18260 3908913 .. 3908930 - -14.1  -5.04249   GCCGGAAAAAACAAA             GGGCGCC AAAA GGCGCCC              TTGTCATGTATCAGC 100 47
LQF05_RS18255 NONE
LQF05_RS18250 3907973 .. 3908004 - -23.2  -3.53091   AGCGCGCCGCTGAAA      CGAAGAAGCCCGCT CAAT AGCGGGCTTCTTCG       TGATCCGTGCAGCTC 100 39
        cyaY 3902725 .. 3902754 - -22.3  -5.07107   GAAATGCTGAAAAAA       GCAAAACCCCGCC CGAA GGCGGGGTTTTGC        TGACCTGCCGGAGAC 100 115
         rnk 3901897 .. 3901915 -  -7.3  -3.86015   TACCTGCGCTACAAA             TCGCGGC TGGAG GCCGCGC             TGAACGCCGCCATGG  65 389
LQF05_RS18170 NONE
LQF05_RS18165 3892849 .. 3892863 -  -5.6  -4.00348   CCGGAATCAAGGAAA               GCGTGG GCA CGACGC               AGGTCAGCGCTGGCG  65 87
        hemC NONE
LQF05_RS18155 NONE
LQF05_RS18150 NONE
LQF05_RS18145 3888609 .. 3888642 - -13.1  -3.14564   GCAGGCCTGCAGGAA     GCCGTCAAGCCCGCC GCAT GGCGGACCTGACGAA      ACGGTCACAGCGTAG  74 30
LQF05_RS18140 3887900 .. 3887954 -  -7.9  -2.67515   CGCACGAGCAGACTA TGCCGCGC-CGCTCGATGCATCAAGCA AAA TGCCCAACGAATCGCGCGAGCGCA-CA GGCAGCCGCAGCTGC  52 108
LQF05_RS18135 3887245 .. 3887266 -  -6.5  -2.64616   GGTGCACCCATACTA           GACGGCC CGCCAGGT GGCCGCC            AGGGGACGCGAAGCG  49 71
LQF05_RS18130 3886308 .. 3886344 - -18.8  -3.32844   CCCGGTAGCGCACAA   CCGCGCCGCGCTG-GAA GTCC TTCGCAGCGCGGCGCTG    CAGACTCAGCTGGAG  93 31
LQF05_RS18120 NONE
LQF05_RS18115 NONE
LQF05_RS18110 NONE
LQF05_RS18105 NONE
LQF05_RS18100 3881388 .. 3881419 -  -6.5  -2.82635   AGGGTTACTACTACA     GCCG-GCCGCTGCCG TTAC CGGC-GCTGCGCGAC      TGGCTGGCCGAGCGG  49 45
        hemB 3876624 .. 3876637 -  -5.2  -4.07568   GCTTTGCCTCGAAAA               GGGC TCACTG GCCC                CGTTTTAATTGTTGT  61 16
        ppk1 3874338 .. 3874359 - -15.9  -4.10552   GCGCATGAAATGAAA           CAAGGGCCC GCAG GGGCCCTTG            TTCATTCAGTCAACC 100 57
        trxA 3872280 .. 3872299 - -12.8  -5.21709   CTGCAGATGAAAAAA            GCCCCCGC ATCT GCGAGGGC             TTTGGAGGCGATCTT 100 49
         rho 3870791 .. 3870808 - -14.1  -4.17296   CTGCAGACAGACAAA             GGCCGGG TTTC CCCGGCC              TTGTTGGCAACAACG 100 47
        ubiD 3869195 .. 3869215 -  -5.4  -3.36492   CTGTGAACGGGATAA           CCCG-CCAA GGCT TCGGACGGG            CTCGGGCCCGCCTCT  52 50
LQF05_RS18050 3868144 .. 3868174 - -20.6  -3.57119   GACAGACGCGCTAAA       TGAAAACGCCGGGC ATG ACCCGGCGTTTTCA       ATTGAACCGAGAAAC 100 46
        rpmE NONE
LQF05_RS18025 3862094 .. 3862105 -  -2.2  -3.67112   AGCATACGCCAAGAA                CGAG CGCG CTCA                 CAAGCCAACGTGCGG  49 98
LQF05_RS18020 3860733 .. 3860748 - -11.8  -5.81412   CGCAGCCAAAAAAAA              CCCCGC CTCG GCGGGG               TTTTTCTTTTCAGAG 100 45
LQF05_RS18010 NONE
        pilN 3856452 .. 3856473 -  -4.4  -2.72227   AAGACTTTCCAACGA           CTCAGCCA GACTCA TGGCTTAG            CTCCTTCCGTAGATG  43 15
        pilO NONE
        pilP NONE
        pilQ NONE
        aroK 3852590 .. 3852604 -  -4.2  -2.55309   CCCCAACAATAAAGG               GGGCTA GGA TAGCGC               AGATTCATCCTGGCT  43 14
        aroB NONE
LQF05_RS17975 3849865 .. 3849881 -  -2.9  -4.14392   TTGCAAGCCCCAAAA              TAGTGCA TTG CGCACTT              TTTTGGGGCATTTTT  60 40
        gltB 3845221 .. 3845264 -  -8.1  -2.94293   GCTGCAAGACAATCA GGGTGAG-CAGCGGCCCCAGC CAAG GC-GGGGCCGCTGCCTGAAGC GGCTTCTTGTTATTG  55 35
LQF05_RS17965 3843662 .. 3843681 -   -15  -6.10489   AAGCGGAAAAAAAAA            GGCACGGC GAGT GCCGTGCC             TTTTACCTTTGGGCT 100 92
        hemE 3842501 .. 3842520 - -16.4  -4.27316   GCCCGCAATGCAAAA            CGCCCCGC TGAT GCGGGGCG             TTTCGTTTCGAGCCG 100 49
LQF05_RS17950 3840088 .. 3840100 -  -6.9  -3.48684   GCACAAGCACGAGAA                GGGCG ATA CACCC                GGCCACTACAAGCAG  58 55
        tsaD NONE
        folB NONE
        folK 3811476 .. 3811493 -  -3.3  -3.53012   TCGCGGCCTGTGAAA             TGACCGC CCCG GCAGACA              ACGCCGCGCAACCCT  49 208
LQF05_RS17735 NONE
LQF05_RS17730 NONE
LQF05_RS17725 3795069 .. 3795083 -  -8.5  -2.78679   GCGCCTCAGCGAAAG               CCGCG GCGCT CGCGG               ATCAGTGCATAAGCG  53 1
LQF05_RS17715 NONE
LQF05_RS17710 3790874 .. 3790898 -  -4.2  -3.05384   GTCGCGTGTAGGGAA         CGCCCTACAGA CGGG TCGGC-GGGCG          GGAGCTCAGACCAGC  46 31
LQF05_RS17705 NONE
LQF05_RS17700 NONE
LQF05_RS17695 3787222 .. 3787233 -  -7.2  -4.14472   TGAAGACTCTGAAAA                GGCG GCCG CGCC                 GCGACGTGCGTCATC  71 41
LQF05_RS17690 NONE
        gabD 3784766 .. 3784781 -    -6  -3.90922   ACGGGTCGGAAAGAA              CGCCAG GAAG CGGGCG               CGGCAGCATACGATG  62 123
        gabT 3783421 .. 3783433 -  -3.3  -3.26649   ACATCCGCACACGAA                TGCCG GCG CGCCA                GGTCGGATCAGGTCA  45 33
         rpe NONE
LQF05_RS17670 3781855 .. 3781875 -  -5.4  -4.72272   GGCCGGCAGGAAAAA           GTCAGGCGC GCCA GCGCC-AAC            GGGCCAGGGCCTTGA  76 115
        trpE 3780292 .. 3780314 -  -3.4  -3.22298   GTTATCCAGCATCAA           CAGCATGA TCAGTTC TCCTGCTG           GTCGCGTTCGGCCAG  45 11
LQF05_RS17660 NONE
        trpD NONE
        trpC 3777400 .. 3777415 -  -3.2  -2.62043   CGGACAAGGAACGTA              GCGC TTGGGTCC GCGC               AAAGACCGAGTGCGA  39 435
LQF05_RS17640 3776109 .. 3776132 - -16.8  -3.30124   GGCGAGCGGGCACAA          GAAAGGGCGC AGCG GCGCCCTTTC           TTTTTTATGTCGAAC  93 395
LQF05_RS17625 3773487 .. 3773499 -  -5.5  -2.76263   GTCAGCAGTCAATCA                GCACG CAC CGTAC                GACCCTGCGCCCAGG  46 6
        argC 3770743 .. 3770768 -  -2.5  -4.36914   GCTTGCCTGACAAAA         CCGGTCAAC TATTCACC ATTGCCCGG          TCGAGCTACGTCATG  63 49
        erpA 3770288 .. 3770307 - -11.4   -4.8622   CCGCGTAATCAAAAA            CGCCGTGC ATAA ACACGGCG             TTTTTCGGTTCAACG 100 46
        tyrS 3765891 .. 3765916 -  -3.2  -3.57406   TCTTTACTAGAAAGA         GTAACTCTCG AATAAA CGAGTGTTGC          TTTGTGATGCTGATA  51 487
LQF05_RS17585 NONE
LQF05_RS17580 NONE
LQF05_RS17575 3763840 .. 3763860 -  -2.6  -4.09243   GACATTCGCCGAAAA            TTTGCATA GAGAA CACGCAAA            TTTTACCTTGACGCG  57 201
LQF05_RS17570 3760870 .. 3760884 -  -2.8  -3.03243   ACTTACCGTCTAACA               GCCAAA TTG TTTGGG               TGTTATATGGTCAAG  41 32
         rrf 3760596 .. 3760633 - -16.3  -4.07568   TCTGCCGCCCCAAAA   GCAAACCCCCGACCTGC TTAC GCGGATCGGGGGTTTGG    TGTAGGAGCTTGACG 100 33
        birA NONE
LQF05_RS17555 3758834 .. 3758846 -  -3.3  -2.91681   TTTCAACCTTATAGA                TGCGC TAG GGGCA                AGCGATTGCCAGCCC  42 17
LQF05_RS17550 3758008 .. 3758032 -  -2.1  -2.64274   ACCCCTCCAAAGTGA          GGCGGCA TTTTCAGCATC TGCCACC          ACGCTGTCAAGCATT  38 135
LQF05_RS17545 NONE
LQF05_RS17540 3757815 .. 3757825 -  -2.4  -3.24289   ACCGCAAACATCGAA                 CCTG GAG CGGG                 TAGCGGGAATCGAAC  43 16
LQF05_RS17535 3757680 .. 3757709 - -16.7  -4.30844   ACGCCACCATTAAAA       CAAAGGCAGATAT TCAC ATATCTGCCTTTG        AGGTTTGGAGCTCAT 100 31
         tuf 3756391 .. 3756422 -  -4.3  -3.86346   CTACTGGCCTAGAAA      GAGTCAGGCCGAC TATTAT GCCGACCTGCTTC       AAACAGATCAATCGT  59 40
LQF05_RS17525 3756286 .. 3756317 -  -7.3  -3.58533   CTAGAACCTTGTAAA      GACTGCCATATTC GATATT GAAAATGGCAGGC       CAGGAGGGAATCGAA  60 18
        secE NONE
        nusG 3755314 .. 3755336 -   -17   -4.4767   CCAGTGACGACAAAA           CCCCGCAGCC TGA AGCTGCGGGG           TGAGGGATGCTTCGT 100 45
        rplK NONE
        rplA NONE
        rplJ 3753396 .. 3753424 -  -2.9  -2.74263   ATGTGATTTTGAAAG        GGCTCACGCTGCC TTA GGCAGCCGCAGCT        TCTTTCTGGTCGCGA  39 10
        rplL 3752890 .. 3752913 -   -16  -4.78149   TCCATAACGGAAAAA          GGCCGGTGGC AAGA GCCACCAGCC           ATCAGCCTGTCGCGA 100 72
        rpoB NONE
        rpoC 3744310 .. 3744332 - -12.7  -5.07011   GACACAAACGAAAAA           TGGCAGGGC ACGAA GCCCCGCCA           ATTTAGGGGTACGAG 100 105
        rpsL NONE
        rpsG NONE
        fusA 3741159 .. 3741173 -  -2.1   -3.8647   AGCCACGACAGTAAA               CCTCT TACTT AAAGG               GCTGAATCAACCTTG  54 32
         tuf 3739920 .. 3739935 - -11.8   -5.2015   TCAACAATAGAAAAA              GGCCCC CGAA GGGGCC               TCTTTCATCATCGTC 100 46
        rpsJ 3739478 .. 3739497 -  -5.1  -2.63301   CAGAGCGTTACACGA            CTAAAAC TCTCAG GTTTTAG             CCGAGGCTGATCTGC  43 22
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN 3733179 .. 3733204 - -17.7  -4.72272   GGGCTCGACCAAAAA         CAAACAGGGCC CGAA GGCCCTGTTTG          ATTCTTACCAGCTGG 100 30
        rpsH 3732646 .. 3732656 -  -6.8  -3.17146   CCCCCTTAGAACACA                 GTGC AAA GCAC                 TTCGCCGCCGACACC  54 5
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY 3729271 .. 3729300 -  -8.5  -3.19653   CTAGAACCTTACGAA       CCACTTCAGCGGA GCAT TCCGCTGCCGTAG        CCCTTCAGGTTGGCT  57 1
        rpmJ 3729083 .. 3729116 - -13.2  -3.82963   CTGTAATAACAAATA     TTCAACCCGGCAGC GCACTA GCTGCCGGGTTATA      ACGCCTTACACAATC  91 39
        rpsM NONE
        rpsK NONE
        rpsD NONE
        rpoA NONE
        rplQ 3726092 .. 3726107 - -11.8  -5.60689   TCAGACAATAAAAAA              CCGGGC CTAG GCCCGG               TTCTTCATACAGCGG 100 45
LQF05_RS17320 3724459 .. 3724481 - -11.3  -5.03715   ACCAGCCGCAAAAAA          GCCGGG-CTC TTCC GAGGCCCGGC           TTCTGCGCTCTACGG 100 52
LQF05_RS17310 3720045 .. 3720073 -  -5.3  -3.48064   CTGACAACCAACCAA       CGCGC-CAGCAA GTTGCG TTGCCGTGCGCA        GCAACCAAGGGCACG  55 57
LQF05_RS17305 NONE
LQF05_RS17300 NONE
LQF05_RS17295 3717588 .. 3717602 - -12.8  -4.64844   CGCAGACAGACAAAA               GGCGCC ATC GGCGCC               TTTTGTTTTTTCCGG 100 47
LQF05_RS17285 3715885 .. 3715903 -  -2.2    -3.741   GGAACAGGGAAAACA             GACGGCTC ATT GCGCGGCC             TCCTCGGCCAGGGTC  52 13
LQF05_RS17280 3714551 .. 3714572 -  -2.2  -2.62616   TGAGCGCGTAGATCA           GTCACGGCG TGGTG CTCCG-GAC           AGATGCAGCGCGATC  38 1
LQF05_RS17275 NONE
LQF05_RS17270 3713570 .. 3713604 -  -8.5  -2.67244   CCAGACTGAAACGGA    CCAGC-CGCGGTTGCA TCAG CGCGACCCCGTGCTGG     CAGCCAGCGCCACGT  52 6
LQF05_RS17265 NONE
LQF05_RS17260 3711351 .. 3711400 -  -4.3  -2.88999   TGGCGATACATGACA TGTCGCAGC-TGGCCGATGCGCTCG CCGC CGAG-GC--CGGCCCGGCCGCGGCA CAGCAGTCGCCGGCC  43 404
LQF05_RS17235 3707795 .. 3707810 -    -6  -3.44051   GGGCGATGAGCACAA              GCAGGC GCTG GCCGGC               GCGCGCGCGCAACTG  55 319
        yedE NONE
        yedF NONE
        nrdR NONE
        ribD 3702215 .. 3702239 -  -4.2   -3.6944   TTTTTAACACAAATA         GCGAC-GCGGG GCAG CCCGTTATCGC          CCGGTAGCAGCTATC  54 91
LQF05_RS17190 NONE
       ribBA 3699985 .. 3700007 - -17.7  -3.61652   TCTTTAAAGAACGAA           GGCGCCGCG GACTG CGCGGCGCC           TCTGATTTATTCGGC 100 32
        ribE NONE
        nusB NONE
        thiL 3697999 .. 3698018 -  -9.2  -3.05384   TCGGGTCGGAGGCAA            GCGGCTGC TCTC GCAGCGGC             GCTTACGCATTGAAA  60 28
LQF05_RS17165 3697402 .. 3697414 -  -4.7  -3.53091   ATTCCTTCCTCGAAA                CCTGG CCG CCCGG                ACCGGAGCCGCCGAT  52 83
LQF05_RS17160 3696671 .. 3696687 -  -2.2  -2.71011   ACTGCGGGCGAATCA              GGCG CGAGAGTTT CGCC              GACGAGCGCGCCGAT  39 73
        ribA NONE
LQF05_RS17150 3695586 .. 3695606 -  -4.6  -2.82635   ACGGCCAGCAGGAGA            CGCATCAG TGCAG CTGCCGCG            GAATACGGTAGAGCA  43 9
LQF05_RS17145 3694355 .. 3694379 -  -7.8  -3.18582   GACCGCACGGATCAA         CGGCCTGGAGG CCAC CCTCC-GGCAG          GACGTATTCGGTTGG  57 439
LQF05_RS17120 3684642 .. 3684658 -    -8  -3.01924   CAGCCTGCTGGAACA              GCTGGA GCAGA TCCAGC              AGCGCGTGAGCCGCG  54 524
LQF05_RS17095 3681986 .. 3681998 - -10.5  -2.52896   TGACGGGCGAACGGA                GCCGG CCG CCGGC                TGCTGCCACGAGCAG  58 54
LQF05_RS17085 3680657 .. 3680705 - -16.9  -2.78816   GGAGCGTCGATGATA CCCGCTCTGCCGGCGGCTGCCTCC TGCG GGAAGC-GCCGC-GGCAGA-CGAG AGACGAGTCCACGAC  84 91
LQF05_RS17080 3679706 .. 3679722 -  -5.8  -2.78384   CCTTTCTCGATCAGA              CTCGCC CGTGC GGCGAA              GGTGCGTAGCGCGCT  46 39
LQF05_RS17075 3678726 .. 3678759 -  -6.7  -3.85817   AGTGGGGCGGATAAA     CCGCGTGGACAA-GGC TGC GCCGTTGTCCACCCTA     CGAGCGCCCTGCCTG  65 158
LQF05_RS17045 3671193 .. 3671233 -  -6.2  -3.53012   TGTCCGCTGCGGAAA TCGCCGAGAAGGTCGAGCTG TCG CAA-TCGCCCTGCT-GGCGA CGCATCCATCGTATG  55 405
LQF05_RS17035 3667392 .. 3667409 -  -3.3  -2.78596   CACCCCGCTAGCACA             CTGCGAGC TAC GC-CGCCG             GCTGGAACAGCCGTA  41 15
LQF05_RS17030 3666150 .. 3666174 - -11.4  -3.05384   GCCCCGCTCAGCGAA         GGCCGGCGCGC TCGG GCG-ACCGGCC          ATGTGCCGTCATGAA  68 34
LQF05_RS17025 3664499 .. 3664556 - -27.9  -2.83915   CGCGCATAAAAAAGG TGGGCTGAAGCCCACCCACCAAGGCCG GCGT CGGCCTCGATGGATGGACCTGAGCCCA CCAAAAGGGCTTCCT 100 114
        hppD 3663095 .. 3663124 -  -5.7  -3.64703   GTCGGCCTACCGAAA       CGCGTGGATGT-GC TTC GCGACATCCACCCT       ACGCAACCCCACCTC  57 51
LQF05_RS17015 NONE
LQF05_RS17010 NONE
        maiA NONE
LQF05_RS17000 3658597 .. 3658631 - -12.2  -2.79952   AGATCAACGGAAGGA    CCGGC-CC-CGCCGAC GAGCG GTCGGCGCGACGCCGG    TGGAGGCGCCGCGCC  69 47
LQF05_RS16995 3656553 .. 3656568 - -11.8  -5.14563   GCCGCCATGAAAAAA              GGGCGC CGAA GCGCCC               TCACGATCACCGTTC 100 44
LQF05_RS16990 3655739 .. 3655773 - -10.7  -3.53012   GGCCGCTGTTCGAAA    GTTGCGGCCAGGCG GAACGGCT CGCCTGGCCGCG-C     TGACGTCTAACCCGC  70 32
LQF05_RS16975 3651703 .. 3651739 - -10.7  -3.61178   CGGAGCGAGTGGAAA    GGGCTGCGCCGTTCCCA CCC TGCGGACGGCTCAGCGC    TTCTTAGCCGGTTTA  73 19
        adhP 3648655 .. 3648712 - -15.5  -3.14132   GGCCGCCGCGATCAA GGCGCTGCCCATCCGCCTGGTCCGCCCG CGT CCGCTGGACGAGGCG-ATCAGCAGCGCC GGCGGCGTGCCCTTC  82 254
LQF05_RS16945 3646059 .. 3646085 -  -3.7  -3.15579   GCAACGCTCCAGCAA        CAGGGCTTATTG TCGC CAATC-GCCCCG         CTGCAGCCGGTAGAG  45 5
        tesB NONE
LQF05_RS16935 3644253 .. 3644263 -  -4.6  -3.63515   GGCGACCTGGAAGAA                 GCGC TGA ACGC                 CGCCAATGCCATCGG  55 294
LQF05_RS16920 3642203 .. 3642222 -  -6.4  -3.45849   GCTACATTAGTACAA            CCGACACA AACT TGTGCCAG             TCTCAATTACCAGCC  58 91
LQF05_RS16910 NONE
LQF05_RS16905 3630618 .. 3630639 - -12.3  -5.81412   TGCAGCGAAAAAAAA           GCCGCC-GGA AAA TCCAGGCGGC           CTTTTTTCTTATTGC 100 47
LQF05_RS16895 3630053 .. 3630071 -  -4.5  -2.55213   GATGTAGCCAAGGTA             GCAAGTG TGCGG CCCTTGC             TGTGAAGTGTCATAG  43 58
LQF05_RS16870 3623628 .. 3623642 -  -2.8  -3.05463   AGTTGTCGTAGGCAA               TCATGA TGT TCATGG               CAGCTCTCCGGACTC  41 39
LQF05_RS16865 NONE
LQF05_RS16860 NONE
LQF05_RS16855 NONE
        narH 3616256 .. 3616268 -  -3.3  -2.74756   AAATCACTTTAAGGA                TGCGC ATG GCTCA                GTCCTCCCACAGCTG  41 23
        narJ NONE
        narI 3614660 .. 3614674 -  -4.2  -3.31792   TGATTACCTCGATAA               GACGCT TGA AGCTTC               GATCCGATCGGCCAG  49 74
LQF05_RS16835 3613613 .. 3613653 -  -2.3  -2.78816   GTAGGGTGGATGACA  CTTTTTCATCCACCGTGGG CCC CGCGCGGTGGGTGGTGAAG  CATCATCCACCCGAC  39 58
        moaA 3612491 .. 3612510 -   -10  -3.86015   GAGCGTTGCGACAAA            CCCGACTGC AAC GCAG-CGGG            GCATGGGTCAGACCG  78 102
        moaB NONE
LQF05_RS16820 3610534 .. 3610561 - -22.8  -3.34962   GCGCAGACGCGACAA        CGCCCGGCCGAT TCGC ATCGGCCGGGCG         TTGTGGCGTTTCAGC 100 36
LQF05_RS16775 3602120 .. 3602145 - -12.5  -2.78712   TGGGGAATGGAATCA         CCGGCGTGGCG AGGC CGCCACGCTGA          CGGTTGCAGTCTGCG  69 138
LQF05_RS16770 NONE
LQF05_RS16755 NONE
LQF05_RS16750 3596782 .. 3596800 -    -3  -3.52204   GGAGCGCCAAACTAA             CCGGCCGA ACA TCAACGGG             TTGTCAAAGAGATGT  47 51
LQF05_RS16745 NONE
LQF05_RS16740 NONE
LQF05_RS16735 NONE
LQF05_RS16730 3592640 .. 3592693 - -11.5  -3.14647   ACCCACCACATGGAA GCCGGGGTGCTGCTGGTTCGCCGCTG AGG CAGCAGCGCACTCGCCAG-CCCCGGC ACACCACTTGCTGCT  69 98
LQF05_RS16715 3589446 .. 3589477 -  -4.5  -2.52464   TTCTCCTCGAATTCA     CTGTTTGCA--CCGG CTGG CCGGCATGCAAGCAG      TGACCGATGGGCTGC  42 45
LQF05_RS16710 3588433 .. 3588477 -  -3.4   -2.8805   ACGATGGCGCAGACA CCGGCACCAGGCACCCTGCGC TCAG GCACAGCGCTGCTG-CGCCGA CAGGCTCGGCGCCAG  42 2
LQF05_RS16705 NONE
LQF05_RS16700 NONE
LQF05_RS16695 NONE
LQF05_RS16690 3583869 .. 3583881 - -10.5  -4.25104   GTTTTGCGAGCAAAA                CCCGG ATG CCGGG                TGGCCTTCTTTTTGG  84 182
LQF05_RS16680 NONE
LQF05_RS16675 3579715 .. 3579725 -  -4.6   -4.0371   GACCCGCTACACAAA                 CGGC CTG GCCA                 AGCTCGAAGAAATTG  62 428
LQF05_RS16655 3577107 .. 3577133 - -19.4  -4.40003   GGCCAGAAAGACAAA         GCCCCCGTCGGA TCG TCCGGCGGGGGC         TTCTGCTTTGCGGGG 100 57
LQF05_RS16620 3568321 .. 3568350 - -14.3  -3.85698   TTGCCGGGCCAGAAA       GCAGAAAGCCCGC TTGC GCGGGCTTTCCGT        TTGCGTCTGGACGCG  93 42
LQF05_RS16615 3567744 .. 3567755 -  -5.8  -2.66316   GGGTTCACTATAGGA                CAGC GCCA GCTG                 AAGTCGTCGTCACAA  46 35
LQF05_RS16610 3566964 .. 3567005 -  -8.7  -3.41602   GGGACTGGACCAGAA CCGCC-TGGCCATGCTGC TGGCCGT GCTGCATCGCCATGGCAG CATCCCGACCTATGA  60 360
LQF05_RS16600 3565387 .. 3565404 - -14.1  -4.81851   AGCGAAACGGAAAAA             GCCCGCC ATTC GGCGGGC              TTTCTATTTTCACCT 100 45
        mscL 3564419 .. 3564460 - -22.3   -3.2048   CCGAAACCGCAGTAA CCGAAAACCGCTCCCGACG CCTG CGCCGGGAGCGGACCTCGG  CGGCGCTCAACCGCG 100 32
LQF05_RS16580 3560591 .. 3560627 -  -2.3  -3.30159   TGAAGCTGTGGATAA   TCCTGTGAATGAAGGG TGCATG CCCTTC-TCCACTGCA    GACCCGCCGCGCGCC  44 77
LQF05_RS16575 3560120 .. 3560134 -  -4.2  -3.54475   GGCGCCAGGACAGAA               CCGG GCCGTCA CCGG               CAGGTCAGCGCCAGA  52 69
LQF05_RS16570 3559471 .. 3559502 -    -4  -3.05069   CTCAGGAAATAACGA      TACAGAA-TATTG AACAAAA CAATAATTCTGTA      CAGCTTTTCCGATGA  43 58
LQF05_RS16565 3559128 .. 3559152 -  -6.3  -2.78463   AGCGCCTTCAGCACA          CGCCCTGGCGA GCC TCACCACTGCG          AACGCATGCCGATGG  46 15
LQF05_RS16560 NONE
LQF05_RS16555 3557419 .. 3557454 -  -3.8  -3.08438   TAGCACAGCCGAACA    GCCGGAGTCGTCGCAGC GTG GCT-CACCTGCCCCGGC    AGCGCTGCGAGCAGT  43 12
LQF05_RS16550 3556679 .. 3556693 -  -5.6  -3.53224   CACCGCGGTTGGAAA               CACGCG CGT CCCGTG               GTCAGCGCCGCCGCG  55 83
        rplU NONE
        rpmA 3554416 .. 3554435 - -11.4  -5.76237   TACAGAAACAAAAAA            GCCCCGTC GCAT GACAGGGC             TTTTCCAGCAACGCC 100 45
        cgtA 3553054 .. 3553068 -    -7  -2.71144   CACCCGCCTGAACCA               GGCCTC ACA GCGGCC               CGACGCTCGCCTCAG  50 37
        proB NONE
LQF05_RS16515 3551313 .. 3551327 -  -8.5  -5.75342   TTCTTGTAAAAAAAA               CCGGC CTAGC GCCGG               TTTTTTTTGTGCCTG 100 80
        murJ 3549247 .. 3549265 -  -6.6  -3.15249   GACAGTGGCGATCAA             TGCCGCAA ATG TCGCGGCC             GCAACCCCGTCAGCA  54 3
        ribF NONE
        ileS 3545253 .. 3545291 - -18.8  -3.54459   CCAAGCTTGCCGAAA   CGCGCCGTCATGCAGCGG CCT CCGCTGAAACACGGCGCG   GCACAGAGCGCGTCA 100 109
        lspA NONE
LQF05_RS16485 NONE
        ispH 3543230 .. 3543247 - -11.3   -5.9218   TAGACAATAAAAAAA             GGGGTCT CTAA AGACCCC              TTTTTTGACGAGAAA 100 44
        thiO 3534576 .. 3534595 -  -4.9  -3.28712   CCGCCGCCCGGACAA            CGACCAG TGCCGG CTGGACG             ACCTGCGAGAAAAGT  49 56
LQF05_RS16435 3534083 .. 3534108 -  -2.5  -3.16106   GCAAAAGGTGAAAAT         TG-GTGAGGCTG TCA CAGCGGCACTCA         GCCGCCGGACTTCTT  43 23
        speA 3531600 .. 3531611 -  -5.8  -3.05268   GAAGGACGCTGAACA                TGGC CTAT GCCA                 TTGCCGCCTACCTGC  49 485
LQF05_RS16410 3528426 .. 3528440 -  -2.7  -2.52464   GCTGGTGGCAATGGA               CCGGC GGCCT GCTGG               GCGCGTTCTTTATCG  37 256
        ptsP NONE
        pfkB NONE
LQF05_RS16365 3518908 .. 3518943 -   -12  -5.00138   GATGCAAAGCAAAAA    GCTGGCGAAACCTTCTG ACA CA-AAGTCTTCGCCAGC    TTGTAGTGGATGCGG 100 78
LQF05_RS16360 3516339 .. 3516352 -  -6.7  -3.10112   AGTGAAGCCACCGAA               CCATC CTTA GATGG                CAGGCACATCATGCG  52 156
LQF05_RS16345 3512385 .. 3512403 - -17.4  -4.55128   AGGCGGAAACGAAAA             CGCCCCGC ATG GCGGGGCG             TTCGTGCAGCGACTA 100 45
LQF05_RS16330 3508485 .. 3508504 - -10.7  -4.05446   CCTGGTAACGACAAA            GGCCGCT TCGAAG AGCGGCC             TTTGTTCTTTCACGC  80 48
LQF05_RS16295 NONE
LQF05_RS16290 3499499 .. 3499517 -  -2.2  -4.06562   AAGCGCAAGCATAAA             GCATGAGC GCC GCCCGGGC             CCAACCGCCGCAGAG  57 98
LQF05_RS16285 3498346 .. 3498369 -  -4.5   -4.1891   TTCCTGGAACACAAA          CCGGC-TGCC TTGCT GGCATGCCGT          CGAACGTTCCGGGCA  65 177
LQF05_RS16280 NONE
LQF05_RS16275 NONE
LQF05_RS16270 3496540 .. 3496572 - -12.5  -2.66733   CGCTAACGCAGAGGA      CGCCTGGGCGGGCCG GAG CGGCCCGCCCGTTCA      GCCTTCGCGCACCTG  68 23
        mreB 3489088 .. 3489134 - -13.9  -3.53091   ATGGCTGGGGCTAAA CGCGACAAGCCGAAAG--CCGGC GCA ACCGGAGCTTTCGGCTTGTCATG AGCGACGAGGCGCTA  86 43
        mreC NONE
        mreD 3487495 .. 3487509 - -11.4  -3.26545   GCCATACATCATCAA               GGCACG GCC CGTGCC               GAGCGACACAAACCC  69 86
LQF05_RS16220 3486167 .. 3486179 -  -9.1   -4.1523   CTCAACGATAAATAA                GCGAC AGC GTCGC                ATATCCGGGTACGTC  79 88
LQF05_RS16215 NONE
         rng NONE
LQF05_RS16205 NONE
LQF05_RS16200 NONE
        tldD 3477768 .. 3477822 - -12.9  -3.85698   GCGGCCTGCGATAAA CCTGTCCGTTC-TCATGTGCCGGCTGG CCC CGAGCCGGCACCTGATGACCGG-CAGC CTCAAGCGCCGGTAC  86 27
        pmbA 3475493 .. 3475524 -  -7.3  -3.75738   CACCATCATCAACAA     GCTTGGCCTGCACGC GCGT GCG-GC-GGCCAAGT      TCGTCGCCGTCGCCA  65 285
LQF05_RS16130 NONE
        mlaE NONE
        mlaD NONE
LQF05_RS16115 NONE
LQF05_RS16110 NONE
LQF05_RS16105 3464873 .. 3464896 -  -3.8  -5.39721   CCATCATACAAAAAA          GCCCGGAGGCT GCG AACC-CCGAAC          CTCGCGCACAGATCT  85 40
LQF05_RS16100 3464557 .. 3464597 -  -7.4  -2.70932   CTCTGCCTGGAATGA  TTGGTTGCGCAGGCCTGA GCCGA TCAGGCGCGCGCGGCCCA  GTCTGTGCGACTGAA  50 8
        murA 3463081 .. 3463093 -  -9.1  -3.33361   GACCAACGAGAGTAA                CAGCC GAA GGCTG                GCCCGAAGGGCGAGC  63 143
        hisG 3462268 .. 3462282 -  -9.2  -3.41745   CCGCTAGAATATCAA               GCCCAC CGT GCGGGC               ACCCGAGAATTTCAG  66 84
        hisD 3460702 .. 3460732 -  -8.3  -2.65264   CCACCAGTGACATCA      GGCGGAAG-G-GGCC GGC GGCCTCGCTCCCACC      TTACGGCTTACTTGA  52 33
        hisC 3459555 .. 3459584 -  -6.3  -4.57073   GACGCCCCCGAAAAA       CCACCGGAGGACG CGCC CGCCCTGCGTTAG        CCGAGCGCCTCGAGC  74 22
LQF05_RS16070 3457344 .. 3457367 -  -2.5  -3.09492   GGCGCAACTCTAACA         CGGCCATAGAT TCTA ATC-A-GGCCG          CCTTTTAGACCTAAA  41 129
        cysD NONE
        cysN 3454410 .. 3454429 -   -15  -5.27335   TTGCCCAAACAAAAA            CGCCCTGC GTTG GCAGGGCG             ATTTCATTTCAACTA 100 51
        pilB NONE
LQF05_RS16045 3449844 .. 3449856 -  -4.8  -2.65815   CTCATACTTAGACGA                CAGC ACCTA GCTG                GAAAATCGGAAGGTA  43 5
LQF05_RS16040 3448930 .. 3448959 -  -5.8  -4.62984   GGACGACAGACAAAA      GC-CGATCGGT-GA CAGG TCGACCGACCGAGC       GGAGTTAGAAGCGAG  76 30
        coaE NONE
        yacG 3448023 .. 3448042 -  -4.9    -3.918   AGATAAATGAGGAAA            CTGCGAG TCAATG CTCGCGG             GGCGGCAGATCACCG  59 13
        rplM NONE
        rpsI 3444938 .. 3444963 - -13.3  -5.86332   GCAAGGCAAAAAAAA         CGCCCAGCTCC GAAC GAAACTGGGCG          TTTCTTTGAAAGCGC 100 44
        petA NONE
LQF05_RS16000 NONE
LQF05_RS15995 3442094 .. 3442118 - -17.1  -5.28176   TTGAGGCAGAAAAAA          CACGCGCGCCC ATT GGGCGCGCGCA          AGGTACAACGATTAC 100 51
LQF05_RS15990 NONE
LQF05_RS15985 3440563 .. 3440581 -  -2.3   -4.0641   GCTGATCGAGACAAA             GGCAGCG GTCAA CATTGCC             AAGGCCCATCCGGAC  57 466
        rsmI 3436535 .. 3436547 -  -2.6  -3.75332   ATGCCGCAAGCGAAA                CGCC GGCAG GACG                CCTTGCTACTTACGC  52 31
        rnpB 3436053 .. 3436087 -  -7.4  -2.96963   TAGGAGCAACAAGGA    GCTACTCAACAAAGT TAAAGT ACTTTGTTAAG-AGC     AAGAATCTTTCGGAA  51 69
        mraZ NONE
        rsmH NONE
        ftsL NONE
LQF05_RS15935 NONE
LQF05_RS15930 NONE
LQF05_RS15925 NONE
        mraY NONE
        murD NONE
        ftsW NONE
        murG NONE
        murC NONE
LQF05_RS15895 NONE
LQF05_RS15890 NONE
        ftsA NONE
        ftsZ 3419080 .. 3419091 -  -2.2  -3.29043   AATTGGCGGCGATAA                TAGC AGAT GCCA                 ACTTTGCTGAACACC  44 70
        lpxC 3418066 .. 3418083 - -12.7   -5.8187   TACGGAATAAAAAAA             GGCCACC CGAG GGTGGCC              TTAAATCTAGGAAGA 100 51
LQF05_RS15825 3409553 .. 3409563 -  -8.2  -4.08216   CCAGGCGCGGGAAAA                 GGCG CTG CGCC                 TGTTGCGACCGGAGC  72 106
LQF05_RS15815 3407165 .. 3407185 - -13.3  -3.29263   ACATGTGCCCGAGAA            CAGGCAACC ACA GGCTGCCTG            CCAGCTTCGGAAGGT  81 227
         mqo 3405499 .. 3405521 - -14.9  -5.28176   CGGAGGCACAAAAAA           GCCCCGTAC GTTCG GTACGGGGC           TTTTTCGCTTCAGCG 100 48
LQF05_RS15800 3404457 .. 3404482 - -21.9  -4.86385   AGGGGCAAAAAGAAA         CCCCGCCACGG ACAG CCGTGGCGGGG          TTCGGGTGCAGCACG 100 62
LQF05_RS15790 3402303 .. 3402335 -    -4    -3.794   GCCGAATGGAGCAAA     CGTCTGGCTGCCTGC CCGA GCGTGCAG-CAGCCG      TACCTGATCCAGCAG  56 104
LQF05_RS15780 NONE
LQF05_RS15775 NONE
LQF05_RS15770 3399830 .. 3399855 -  -6.7  -3.14132   GGCGGCGCCGAGGAA         GCCAGCCAGGC GAGC GCCGGCCTGAC          GCGTCTGGCCGAGCA  51 99
LQF05_RS15760 3396422 .. 3396435 -  -9.5  -3.63515   TCTGAGCTGGAACAA               GGGCC GCCT GGCCC                TTTCCGAACAGATGC  68 417
LQF05_RS15735 NONE
LQF05_RS15730 3390864 .. 3390894 - -12.5  -3.61715   GACGTCCTGCAAGAA       CGGGTGCAGACCC TGCTG GAGTCCGCCCCCG       CGTAACCGAACGCCT  82 41
LQF05_RS15720 3388020 .. 3388030 -  -6.8  -2.57211   ACCGTGCGGCAGAAC                 CCGT CCA ACGG                 CTCGGCACATCAGGC  49 35
LQF05_RS15715 NONE
LQF05_RS15710 NONE
LQF05_RS15705 3380682 .. 3380703 -  -2.9  -4.12902   CAAGCACCCGGAAAA           GCGCGGCGAG GAC CTGGCCAC-C           ACACGCCGGGCCTGC  60 453
LQF05_RS15685 3375822 .. 3375844 - -10.5  -5.60993   CTCCTGACAAAAAAA           CGCCCCGGC ACACG ACCGGAGCG           CTCTCTTTTTCGATC 100 95
LQF05_RS15680 3375284 .. 3375307 - -13.8  -4.06687   AGGCGGGAGAAAGAA          GCGCGACCGC GGCT GCGGTCGCGA           GAGGCGGGATCAGGC  95 35
LQF05_RS15675 NONE
LQF05_RS15670 3373336 .. 3373366 -   -16  -3.53012   CGTTCGGCGGCTAAA       CAGCGCGGCGGCCC GGA GCGCCGCCGCGGCG       GGGGCAGCGGCAGCC  93 66
LQF05_RS15635 NONE
LQF05_RS15630 3368273 .. 3368299 - -10.2  -3.31501   AGCAATTCGCCAGAA        CGGCCTGAGGC GCTTGT GCCTCAGGC-G         TCGTAACCGGGGCTT  68 19
LQF05_RS15610 3364977 .. 3365010 -  -6.8  -3.14602   TCGATCTGAGCAAGA    CG-GACGCAGCGCGGTA GCT TACC-CGC-GCGCCTCG    GCAAGGCAATGGCTG  54 117
LQF05_RS15605 3363675 .. 3363687 -  -3.3  -3.48276   TGCTCCGGTACACAA                CGACC GTC AGCCG                TTGCGGTTGAAAATG  49 19
LQF05_RS15600 NONE
LQF05_RS15595 3362691 .. 3362721 - -21.3  -3.53444   GCATCTGCGCGGAAA       CGAAAAGCCCGGC CTAGT GCCGGGCTTTTCG       CTTTCACACCGCCTG 100 42
LQF05_RS15585 NONE
LQF05_RS15580 3358858 .. 3358876 - -13.1  -3.99324   GCGCATCAGCACAAA             GGCCGGC TTCTT GCCGGCC             TTTGTGCTTTCAGGA  86 35
LQF05_RS15570 NONE
LQF05_RS15565 NONE
LQF05_RS15560 3355793 .. 3355845 -  -5.5  -3.14463   AACGCCCGCCAGCAA CTGCACC-GTCGTCTGAGCGCCAGC GGCCT GCCGGTGCTC-GACGTCCAGCCCAG CGACCTCGGGCCGGC  49 114
        sbcB 3347402 .. 3347442 - -14.8  -4.07133   CAGGGTTATAAAGAA  CGCCGCTTCCCGACGT TATTGATCG ACGTCGACAAGCGGCG  TTTTTTATTGCGCGC  95 95
        purU NONE
LQF05_RS15510 NONE
LQF05_RS15505 3344047 .. 3344059 -  -9.1  -3.15574   TGAAGCGTACGAACA                CACGC AGT GCGTG                AATTGCGGCCGGAAC  61 48
        dmeF 3339192 .. 3339213 -  -9.4  -3.31144   CTTCTAGGGTCAGAA           GCGAAGCG GATAAG CGCTCCGC            CGCAGAGTGACCGCC  63 234
LQF05_RS15480 3337698 .. 3337709 -  -3.6  -3.09831   CTGATCTGAAAATCA                GGAG TCTA CCCC                 AGCCGTCAGCGATGA  43 92
        moaC NONE
LQF05_RS15470 NONE
        moaE 3336266 .. 3336280 -  -9.2   -2.7419   AGATGACCTGAATCA               GGCCGG GGC CCAGCC               GAAGCGGCTAGAGTT  57 242
LQF05_RS15445 3332532 .. 3332555 -  -4.5    -3.767   TACTCATCCATGAAA          CG-AGCCGGC ACGAG GCCGACCACG          GAGGCTCAACGCACC  57 31
LQF05_RS15440 3331278 .. 3331302 -    -2  -3.45366   GCTTGAAGGAATGAA          TGGTCATGCG CTCAC CGCTCGATCA          GCGCAATGCGCTTGT  47 12
LQF05_RS15435 NONE
LQF05_RS15430 3329368 .. 3329384 -  -4.3  -3.06696   GGCCGGCCGAAGACA              GCCGAAC GCC GTCCGCC              CCGACGGTCCCCCCT  46 51
        purL 3325349 .. 3325375 - -14.5  -5.04601   TTCACAAAGGAAAAA        GCCCGCT-GACG CATG CGTCGAGCGGGC         TATCTGGTAGCGCTC 100 51
LQF05_RS15420 3324684 .. 3324695 -  -4.4  -3.14132   GTGTGGCCCCAGGAA                GCAT GATC ATGC                 TGCACGGCACGCCAG  45 215
LQF05_RS15405 3322892 .. 3322919 - -19.2  -3.21099   TTGTCGGATGATGAA        CGCCGG-GACGCC GAC GGCGTCACCGGCG        TGGCTCAGGGTTTGC  91 30
LQF05_RS15400 NONE
LQF05_RS15395 3322130 .. 3322140 -  -2.4  -4.09685   CGTTACGGTTGAAAA                 CACG AAC CGGG                 TAAGGCTACGTCTTA  57 38
        purT 3320799 .. 3320821 -  -9.8  -2.72991   GCAGATCGGCAACTA           TCGCCTGGAG ATC CTCCAGGCAG           CCGACAATCGGGTAA  56 128
         ffh 3317021 .. 3317034 -  -3.7  -4.26188   GGCACACACTTAAAA               TGGGC CTAG GCCCG                AAAGGCCGCACATTT  62 157
        rpsP NONE
        rimM NONE
        trmD NONE
        rplS 3314984 .. 3314999 - -10.4  -5.42514   GCAGAAACGAAAAAA              GCAGCC CAAG GGCTGC               TTTTTCGATTCGCGG 100 51
        xerD 3313861 .. 3313871 -  -2.4  -2.73159   CCAAGTGCTGCAAAC                 TGCC ACA GGCC                 TCTCCACTACGTTGT  39 101
LQF05_RS15345 NONE
LQF05_RS15340 3312398 .. 3312416 -  -8.1  -3.71873   CCATTCACAGCGAAA             CGACCGG ACCTG CCGATCG             ACAAAAGAGTCGCAC  67 84
LQF05_RS15335 NONE
        thrC 3309549 .. 3309568 - -13.6  -4.93365   CTCCATAACGAAAAA            GGCCAGTC ACAT GACTGGCC             TTTTTCACATCACCG 100 45
LQF05_RS15315 NONE
LQF05_RS15310 3305369 .. 3305387 - -13.1  -3.64915   GTGCAGAAAGTACAA             CCCCGGC ACATG GCCGGGG             TCGGTTGGCTCAGGC  82 52
        gloA 3304889 .. 3304914 - -16.3  -4.59773   TTCGATCTGTAAAAA         GAAAAAGCCCC GAAA GGGGCTTTTTC          ATACTTGCCGCTCAG 100 37
LQF05_RS15260 3295969 .. 3295997 -  -9.6  -3.06737   GATCAATTGGCAAGA       GCAGGCCG-ACAG CCAG CTGCACAGCCTGC        TGCGAGCACTCGGCC  60 482
         ung 3292105 .. 3292149 - -10.5  -2.53876   GGCGAGCGCAACTGA CCCGTCAGACCCGGTGCCCGC CGT GCAGGCATCGGGTCACACCTG CGCCGGAAGCTGCCA  60 17
LQF05_RS15220 NONE
LQF05_RS15215 3288299 .. 3288356 -  -8.4  -3.15544   TCGGATGGCCAGCAA CTCGCTGCTCGA-GTGCTTCGTCTACGGC CGC GCCGCGG-CGCAGGACATCGTGC-GCGAG CTGCCCCAGATCACC  57 384
        rpoE NONE
LQF05_RS15200 NONE
LQF05_RS15195 NONE
LQF05_RS15190 3284178 .. 3284204 -  -4.4  -3.72078   TGACAAAACAAGGAA        GCTCA-GGGAC TCGCAG GCCCCGCGAGC         ATAGCGCGCAAAACC  57 1
LQF05_RS15185 3282682 .. 3282705 - -18.2  -3.61646   AACGGCAGAAACGAA          GAAGGGCGGC CTGA GCCGCCCTTC           GTTTGCTGCACCCGC 100 43
        lepA NONE
        lepB 3279848 .. 3279864 -  -5.1  -3.91882   GCAGGACAAATATAA              CGAGC CCACTAC GCTCG              ACGGGGGCCGCAATT  59 49
LQF05_RS15170 NONE
         rnc NONE
         era 3277823 .. 3277839 -  -2.2  -3.04144   GGGTGAGTGCGAAGA              GGCTGT TACTG ATAGCC              CAGCGAATGCAGTGC  41 14
        recO NONE
        pdxJ 3275840 .. 3275856 -  -7.9  -3.14211   ACCTCCGGCCAGGAA              GCGGCGA TGA TCGCCGA              TCTGGCAATCGCGCC  55 520
LQF05_RS15135 3274464 .. 3274487 -  -5.2  -3.05844   GCTGGTACCGGAAGA          CCGCTACGCA CAGA TGCGCAACGT           CTGGTTCCTACCCTC  47 271
LQF05_RS15110 3269055 .. 3269073 -    -3  -4.63218   GCTGTGGTAACAAAA             GCGCACCA GGA TGGCGCAG             GAATATCTGCGTAAT  68 78
        putA 3265697 .. 3265718 -  -5.8  -2.76696   GCGGGCGTCAACAAC           CCGCTCAG TCGTCG CCGAGCGA            CAGCAGCGAGGCGTT  46 8
        putP 3263825 .. 3263852 - -16.4   -4.4009   GCTCAGGCCAGAAAA        CAAAAACCCCGG CTAG CCGGGGTTTTCG         CCATTTGGTGTGCGA 100 128
LQF05_RS15090 3261291 .. 3261313 - -12.7   -4.8622   CGCTCTAACGAAAAA           GGGCCGGCA AACGG TGCCAGCCC           TTTTGGCGCAATCAC 100 48
        putP 3259153 .. 3259169 -  -4.3  -4.09685   GTCGAGCCGTGAAAA              GGATGCC TCA GCCACCC              TGCGCGACGTACTCG  62 513
LQF05_RS15075 3256983 .. 3257013 - -12.6  -2.83409   TAGCAACCCACTAGA      GGCCCGCTGGTCC CAAGGC AGACC-GCGGGCC       GCATCGTGCGAGTAC  69 434
        pcaQ 3231899 .. 3231911 -  -3.3  -4.35524   GGCCGAAATTGAAAA                GAACG GGC CGATC                CATAACCCAGGGGTT  65 39
        pcaH NONE
        pcaG 3230489 .. 3230500 -    -3  -3.80893   AGCTCAGAAGTCAAA                GAAA ACCG TTTC                 CGCCTCGCCCTGGAG  52 2
        zapE NONE
LQF05_RS14940 3228411 .. 3228444 -  -9.7  -2.90763   CGGACAGCTGATATA     GGGCGATTATCGA-CA CAG TGACCGATAATCGCCA     ATGCGGCTTTAGTGC  59 34
LQF05_RS14935 3227426 .. 3227457 -  -8.2  -3.28791   ACTCCCGGGCCACAA      TCCGATAATCG-ACA TAG CGTTCGATTATCGAA      CGGATTAGCGTGCCA  59 110
LQF05_RS14930 NONE
LQF05_RS14925 NONE
        pcaF 3224361 .. 3224373 -  -4.7  -3.12895   CGCTGGATGAACATA                TCCGG GCA CCGGT                GTGAACGTCGCTCGG  48 161
LQF05_RS14915 NONE
        pcaD NONE
        pcaC 3221428 .. 3221445 - -11.3   -3.5882   GACACCATCGTTAAA             GCCCTGT TTTT ACAGGGC              TTTTTCGTTTCTGGC  77 211
LQF05_RS14870 NONE
LQF05_RS14865 3214753 .. 3214765 -  -4.1   -4.7078   CGAACGAGTGAAAAA                GCAAT TTC ACTGC                GACCGGCTTGTTACT  70 423
LQF05_RS14860 NONE
LQF05_RS14855 NONE
LQF05_RS14850 NONE
LQF05_RS14845 3213633 .. 3213648 - -11.8  -4.66537   CCCTGGAAGAGAAAA              CCCCGC CGGA GCGGGG               TTTGTTTGCTTCGGC  95 63
LQF05_RS14840 NONE
LQF05_RS14835 NONE
LQF05_RS14830 3210536 .. 3210563 -  -7.6  -3.53012   CGCCGCGCGTGCAAA        GAGCGCAAGCGC ACGC GCGCTGACGGTC         ATCACCACAGGAATT  62 27
LQF05_RS14825 NONE
LQF05_RS14820 3207831 .. 3207848 - -11.3  -3.57263   ACGCCTATCGTTAAA             GCCCTGT TTTT ACAGGGC              TTTTTCGTTTCTGGC  77 302
        apbC 3203318 .. 3203335 - -14.1  -4.56775   AGCTTCTCTGAAAAA             GCCCCGC TTCG GCGGGGC              TTTTTTGTGCCTGCG 100 92
         dcd 3202157 .. 3202172 - -10.4  -5.75342   TCGGCGCAAAAAAAA              CCTGGC TCAG GCCAGG               TTTTTTCATATCCGG 100 47
LQF05_RS14755 3196656 .. 3196666 -  -8.2  -3.33815   AGCGCCGCGAATGAA                 GCCG TCG CGGC                 TGCTCAGAGTGCTCG  59 29
        ttcA 3192576 .. 3192601 - -21.9  -5.42198   GCCGAAAAAACAAAA         CCCCCGGTCGG GTGG CCGACCGGGGG          TTCGAAAACTGCTCT 100 366
LQF05_RS14725 3191196 .. 3191210 -  -7.1  -2.56596   CGGTTGATCAAGCGA               CGGCA AAGGG TGCCG               AGGTTGGCGATTGCC  49 125
LQF05_RS14720 NONE
LQF05_RS14715 3190071 .. 3190087 -  -2.1   -2.8552   CGTCAGTCAGGAAAG              CTTCAGG GAG CCTGCGG              ATTCAGCGCCGGCCA  40 11
LQF05_RS14710 3189151 .. 3189171 - -11.1  -3.05816   CCAGTTGCGATTGAA            GGCCCCC TTGGGGT GGGGGCC            GGGACCCGGGCACGC  68 270
LQF05_RS14705 NONE
LQF05_RS14700 NONE
        cydB NONE
        cydX 3185922 .. 3185975 -  -2.2  -3.52896   GCAGCAGCGAGAGAA GCCGCGCGGTGGTCCGGTACAGCAGC CGGT GC-GCCATGCCGCTC-ACGGCTCGGC ATCCAGATCCTGGGT  47 14
LQF05_RS14685 3185639 .. 3185654 -  -6.1  -2.80988   TCAGACCACGAACCA              GGGCA TCTGTC TGCCC               GAGCATCCGAGCCCG  46 42
LQF05_RS14680 NONE
LQF05_RS14675 3184048 .. 3184064 -  -4.3  -2.94144   GGTCCAGGCAAACGA              GCCATCA CTC TGCCGGC              ATGCGGGGGAAGACG  45 62
LQF05_RS14670 3183466 .. 3183480 -  -3.4  -2.90307   TGAACAGGACTAAAG               GCGACG AGC CGGCAC               GTTGAAATGACGGTC  42 45
        nhaD 3181734 .. 3181765 -  -9.4  -3.16881   GAGCGACCTGAGCAA      CCTGCAGCACGGCGC CGA AC-CCGCGCTGCAGC      GCTGGGCCGAGCATG  60 320
        btuB NONE
LQF05_RS14650 NONE
        cobO 3177601 .. 3177638 -  -6.2  -3.33696   TGTGCGCGCAAGGAA   GCGCCGCGCAGCAGTAC GTCCA GTACGGCAA-ACGGCGC   TGACGCTAGGCCCCG  52 60
LQF05_RS14640 NONE
        bluB NONE
LQF05_RS14630 3174804 .. 3174818 -  -2.7  -3.14051   TGACGCTGAGGAACA               CGCTC ACTCA GGGCG               CTCCGCACACGCGCG  43 14
        cbiB NONE
        cobD NONE
LQF05_RS14615 NONE
        cobU NONE
        cobT NONE
LQF05_RS14600 NONE
LQF05_RS14595 3168204 .. 3168223 -  -2.8  -3.69618   GCGAACTGGAAAACA            GCC-ATCAC CGC GTGGTCGGC            TTTCTCTGGGGACGC  54 379
LQF05_RS14585 3166611 .. 3166631 -  -5.4  -3.14344   CACTCGCCGGACGAA           GTGGCGCGG CTGG CCG-ACCAC            GTGGTGCTGCTGGAG  47 507
LQF05_RS14560 3163016 .. 3163033 - -14.1  -5.25803   AAGCGCTACAAAAAA             GCCCCGG TTCT CCGGGGC              TTTTTCGTTTTCTAC 100 37
         rnd NONE
LQF05_RS14540 NONE
LQF05_RS14535 3158496 .. 3158512 -  -4.3  -4.60487   CACTACCGGGAAAAA              GCGGCAA GTC TAGCCAC              TGCAGGATATCCGGC  73 112
LQF05_RS14530 NONE
LQF05_RS14525 NONE
        ltaE 3155602 .. 3155621 -  -2.8  -3.56643   CGGATAGCCGGCAAA            GGGCCGCAT TAT AT-CGGGCC            TGCGCGCCGGGTATA  49 75
        alaS 3152842 .. 3152858 -  -4.3  -4.35958   TCATTAAACAAACAA              CCTGCAG ATG CCGGAGG              CGCCTCCGGCAACTT  68 43
LQF05_RS14510 3151526 .. 3151553 - -17.1  -2.74192   CACGGCCCAATACGA        CAGAAGGCGCG GACTAG CGCGCCTTCTG         CGAATCACTCCGCAG  84 30
        csrA NONE
LQF05_RS14500 NONE
LQF05_RS14495 3150799 .. 3150813 -  -2.8  -3.86822   TAAGTGCTTGATAAA               CCAG ATCACTG CTGG               TTGCCCGAGCGACTC  54 64
LQF05_RS14490 3150674 .. 3150695 - -15.9   -5.0925   CGCCAAAACGAAAAA           GGGCCTGCA TCGC TGCAGGCCC            TTCTCTTGATTGGCG 100 36
        mgtE 3148385 .. 3148401 -  -7.2  -3.12936   AGGCAAACCCCAACA              CGACGC GAAAA GCGCCG              CTACAGCAGAAAAAT  54 26
LQF05_RS14475 3148023 .. 3148037 -  -8.5  -3.12351   CCTTTCCAGAGTCAA               CCGCG GCGCG CGCGG               TGTTGATGAATCGCG  56 7
        oadA NONE
LQF05_RS14465 3144913 .. 3144926 -  -3.1   -4.7254   ATGCCCGATGAAAAA               GCACTG ACG CAG-GC               GCCGCCATCAGCGAC  74 158
LQF05_RS14445 3143096 .. 3143116 - -11.1  -2.88544   GGTTATCTGCAGACA            GGCCAGGTC TAT GAGCTGGCC            GCCAAGCTCCCGATC  64 319
LQF05_RS14420 3139773 .. 3139790 -  -2.7  -3.16982   CTGACACCAATAAAG             CCTCACCA TCA TGA-GAGG             AGCTAGCCTCAGTTT  43 34
        cheR 3138868 .. 3138885 -  -7.7  -4.07568   CCGGTCGCGTCAAAA             GCGGCAA GCCA TTACCGC              TTTATTGCCGCAGAC  71 80
        flgB NONE
        flgC NONE
        flgD NONE
LQF05_RS14395 3135401 .. 3135420 - -11.4  -3.66908   TTTTTCGAAAAGCAA            GAAGGCCC CGAA GGGCCTCC             TCTGGCAAGAGCGGC  77 82
        flgF NONE
        flgG 3133672 .. 3133696 -  -7.7  -3.02324   GCCATCGAAACTACA          GCGGGGGGACA TGG TGCCTACCCGC          AAACAACGGCGAACC  56 46
        flgH NONE
LQF05_RS14375 3131833 .. 3131843 -  -5.4  -2.63631   CTAATCCTTAGATCA                 CGAT CAG ATCG                 GCTTGCAGCGCGCCA  46 7
        flgJ NONE
        flgK 3128464 .. 3128474 -  -2.4  -2.73124   TTGCAGGGTGGAAAT                 GCGC ATG GGGC                 GGCCTATTACCTGAA  39 32
LQF05_RS14360 3126876 .. 3126900 -  -3.6  -4.14739   CCACCGATGTCAAAA         CGAGG-TCG TTTTTTTG CGAACCTCG          TCAAACCTCTCAGCG  62 35
LQF05_RS14355 3126432 .. 3126465 - -11.7  -2.56914   CAGCCGATCAAGCCA     CGAC-GGGGCCGCTCA TTG CGAACGGCCCCCGTCT     TTCAATCACTGAACG  64 31
LQF05_RS14350 3125554 .. 3125565 -  -5.8  -2.52464   GGCTCGTTGAAGCCA                CCTG CCTG CAGG                 AGGCAAAAGCGAATC  45 113
LQF05_RS14345 NONE
LQF05_RS14340 3124797 .. 3124814 -  -4.9  -2.73875   GCCTTCCCAACATCA             GAC-ATCC TCC GGATAGTC             GAATTCGAACACCCG  43 5
LQF05_RS14335 3124275 .. 3124289 -  -5.6  -2.93991   GGCAAGCCAAGCAGA               CGTTCG GCC CGAGCG               TGCATGTCCTGGATG  48 63
LQF05_RS14320 3118985 .. 3119014 -  -2.7  -4.07568   TCTCTGCCTGGAAAA       CGAGGTGCCGGTGC AGA GCTTCGTCAC-TCG       CAGCGACATGGGCTG  58 256
LQF05_RS14285 3113574 .. 3113594 -  -3.1  -3.73775   TGCACGGGCAGGAAA            GCGCATTAC ACC GCCTTGCGC            TTCTCCTTTTTCTTG  54 10
LQF05_RS14260 NONE
LQF05_RS14255 3107737 .. 3107756 -   -15  -5.30155   CCACCAATGAAAAAA            GGGCAGCC CGTG GGCTGCCC             TTTCGCTTGCCGCTG 100 47
LQF05_RS14250 3106694 .. 3106727 - -13.9  -3.05384   CCTCCCCGGAGGCAA     CCGCACCGGCCGCT TGAAGGC AGCGGCCGGC-CGG     ATTCAGACGGCCTTG  76 28
LQF05_RS14245 3105408 .. 3105418 -  -2.4  -2.78596   GAGCTTTCTAGCACA                 GCAC GGC GAGC                 CGGTCATCCGCGGCA  39 75
LQF05_RS14240 3104793 .. 3104822 -  -7.8  -3.61371   AAACGCCACTGGAAA      CCCGGGTCGC-GCG GGTA CGCCGCG-CCCTGG       ACAAAGGCGAAGCCG  63 130
LQF05_RS14210 3095657 .. 3095677 -  -3.9   -3.8917   GCGCAACGACAAGAA            GGATGTCTC GGT GGAACACCC            GGACTATGTGCGCAA  58 432
LQF05_RS14190 3090659 .. 3090676 -    -4  -3.05935   ATACCGGGCAGCGAA             GGCGGC TTCAGC GCGGCC              GACCCGGCGGTATGG  45 437
LQF05_RS14175 3085332 .. 3085344 -  -9.1   -3.4252   CCTGAGCGAGCAGAA                CAGCC GCT GGCTG                CGCAATCGCGAGCAA  64 315
LQF05_RS14165 3084348 .. 3084360 -  -5.5   -3.0263   ACCATGCCCGCAACA                CTGCC TGG AGCAG                TCACGCTAGCATCGC  49 58
LQF05_RS14135 3080490 .. 3080527 -   -15  -2.71791   ATGCTCCGTGGAAAC  GGCAGTACGGCGGAGCAGG CCG CCTGC-CCGCCG--CTGCC  CCGGCGATTAGTTGC  77 33
LQF05_RS14130 3078037 .. 3078055 -  -4.4  -2.50816   GTCCCAGTGATGAAG             GCGGCGAT TCT AGCGGCGC             GGCAAGGCATAAGCG  42 16
LQF05_RS14125 3077041 .. 3077093 -  -4.6  -3.44527   CATCCAGGACGAGAA GCCGCCCGCCGCCCACCCTTTC ACTGCCCCG GCACGGCTGGTCGACGGCCAGC TGAGCTATGCCGCAG  53 110
LQF05_RS14110 3073721 .. 3073736 - -11.8  -4.81249   GCTGAAACGCAAAAA              CGGGCC CGCA GGCCCG               TTCTTGCTTGAGGGG 100 49
LQF05_RS14105 NONE
LQF05_RS14100 NONE
LQF05_RS14095 3071321 .. 3071345 -  -4.8  -3.06796   TGCGATCGGACTCAA          GCCCACCGCG CGCCT CGCGAACGGC          AACCCGCCGGCGCTC  46 43
LQF05_RS14090 3071175 .. 3071192 - -12.7  -5.50313   CATAAAACGAAAAAA             GCCCGCA TCGC TGCGGGC              TTTGAGTTCTGTGGT 100 37
LQF05_RS14080 3068795 .. 3068824 -  -9.9  -3.05844   CGGCCTACCTCAACA       CGCTG-GCCCGGCG CTT CGCCGGTCACACCG       CCCTGGGGTTGCTGC  64 214
        urtA 3056802 .. 3056816 -  -4.2  -2.80816   TCGCCACGGACCACA               CGGC CCGTGAC GCCG               GGAGAGTTACTGGTA  43 32
        urtB NONE
        urtC NONE
        urtD 3053829 .. 3053872 -  -4.3  -3.12432   AAACGATGTAACAGA GGCGGCTCACGTGGACCCG CGCGGC CATGACCACGCGCGCCAAC AGCCCCAGCGACTCA  46 38
        urtE 3052918 .. 3052963 - -13.9  -4.26076   GCAGCGGCAGGAAAA GGCAAAAGCCGAGGCCCTGCG AGTC CGCAGTTCCCCGGCTGTTGCT TGTGGCTGCTTTCAG 100 152
LQF05_RS14010 NONE
LQF05_RS14005 3051069 .. 3051099 -  -2.5  -3.63515   CCTGATGGTGAACAA       GACCTCGCCGT TTTCCACCT ACGTGGAGGTC       TTGGGAGCGTAGGCG  49 73
LQF05_RS14000 3049949 .. 3049966 -  -9.1  -3.53811   TCCATTCGGTGCAAA             GCCGCGA AGGC TCGCAGC              GAATGGCCGCCCCGC  66 47
LQF05_RS13995 NONE
LQF05_RS13990 3047791 .. 3047806 -  -3.9  -3.28712   GGTCCCGTTGCAGAA              CCCGG TCTTCG CCGGA               CAGGCCGACGCTTCG  47 136
LQF05_RS13985 NONE
LQF05_RS13980 NONE
LQF05_RS13975 3044847 .. 3044859 -  -4.7  -2.95298   TTCATTGATGACATA                GGGTG GAC CGCCC                GAGCGAAGCGTTAGT  45 68
LQF05_RS13970 3044580 .. 3044598 - -11.7  -5.75945   ACCGCTCAAAAAAAA             TGCCCGC TCGAT GCGGGCA             TTTTCATTTGTGGGG 100 49
LQF05_RS13955 NONE
LQF05_RS13950 3039329 .. 3039348 -  -4.3  -3.29987   GACAGTATTAGAACA            TAGGCAA TTTAGC TCGCCTA             GCCCCGAACCGGTTT  49 23
        recA NONE
        recX 3037629 .. 3037648 -  -6.4  -2.61452   ATTACGTCAACGAAC            CGGCCA-AC TGG GTGCGGCCG            CTGGACAACGAGGAC  49 120
LQF05_RS13925 3032461 .. 3032495 - -13.5   -4.1673   TAAGGCTGCAAGAAA    TGGGCGGGA-GCGGCG GACA CGCCGCATCCCGCCGG     GCCGAACTCAGCCTT 100 33
LQF05_RS13915 3031165 .. 3031192 -  -6.8  -3.53012   CTGTGGCCGCGCAAA        CCGGAACCGCTG GCTA CTGCTGCCCCGG         CCAAGGCCTGAGGCC  58 41
LQF05_RS13905 3029360 .. 3029393 - -18.9  -2.68279   CAGCGATGAAATCCA     GCTGCCGCCGATCGCC TGA AGCG-CCGGCGGCAGC     AGTTCAACTGGTGGG  88 29
         fpr 3027279 .. 3027311 - -12.1  -4.08485   TGGAGGTAAACGAAA     GCAGCGTGCT-GGGC GGCAA GCCCGAGCACGC-GC     TGGTGACCTTCACCG  85 277
LQF05_RS13880 3025701 .. 3025719 - -13.1  -5.40072   TCGCCCCCAAAAAAA             GCCGGGC GCAAG GCCCGGC             TGGATCAGTACTCAG 100 49
        dinG 3022937 .. 3022953 -  -3.6  -3.17075   GGCCCTGCAAGGGAA              CCGGCA GCCAA TGCCGT              GATGGATAGCTATCG  45 61
LQF05_RS13865 NONE
LQF05_RS13860 3020920 .. 3020939 -   -15  -4.50058   CAGCCACAACGAAAA            CAGGCCCG CATG CGGGCCTG             TTGCAGTCGAGCTCG 100 50
        pdxH 3020065 .. 3020120 - -14.7  -3.33037   ACGGCAAATTACCAA CCCGCTCACCGTCGTGCCGCTGGCCC GCTGG GAGCCAGCGGCACGAATGC-AGCGAC CGGATCAGGGCGCCA  86 30
LQF05_RS13845 3019010 .. 3019052 - -17.8  -5.26119   TTTCGAAAAACAAAA GGCGCCGCCT-CCGTCCCG TTTTAT CGGAACGGAAGACAGCGCC CCGGCTTCAGCTGTG 100 58
LQF05_RS13840 NONE
LQF05_RS13835 NONE
LQF05_RS13830 NONE
LQF05_RS13825 NONE
LQF05_RS13820 3013482 .. 3013492 -  -4.6  -2.65091   ACTTCAATCCAGAAT                 GGCA TAT CGCC                 TCCTCAGTCGATGAT  43 29
LQF05_RS13815 3012717 .. 3012727 -  -6.8  -3.76402   AGCGCATCGAGGAAA                 TCCG CAG CGGA                 CTGATCGCCGCGCTG  62 455
        rpsB 3008513 .. 3008527 - -12.8  -5.10064   CGCAAGAGACAAAAA               GGGGGC CTA GCCCCC               TTTTCGTTTATCGGG 100 64
         tsf 3007522 .. 3007549 - -14.8  -3.92522   GCCCAATTCGACAAA        GAGGCCGCGCGC GTGA GCGGGCAGCCTC         TTTGCCAGAACCACC  93 50
        pyrH NONE
         frr 3005998 .. 3006012 -  -3.5  -5.54338   GAACCAAAAGAAAAA               GCTGC AAGCA ACAGC               TCGATGGCATCTCGC  88 90
        uppS NONE
LQF05_RS13775 NONE
        ispC NONE
        rseP 3001755 .. 3001765 -  -2.4  -2.73721   ATGAACCGGCAATTA                 GGCG CGG CGAC                 ACTACGGATTCGGCG  39 41
        bamA 2999321 .. 2999345 -  -7.1  -4.42062   CACTCCTGAAAGAAA          GCACTGAAGCA TGA CGCCCCAATGC          TAGAACGTTTGTCCC  74 25
LQF05_RS13755 2998779 .. 2998801 - -11.2  -3.38522   GACCGAGCGTAAACA           CTGCGCCGGC CAT GTCAGCGCAG           TTGGTTCATGCGCTC  72 17
        lpxD NONE
        fabZ NONE
        lpxA NONE
        lpxB NONE
        rnhB 2994538 .. 2994580 -  -6.3  -3.60627   GGATTGTACCGGAAA GCAATCGTCCGCTGGCGAACG TAC CGACCGCCAG-AGCC-ATTGC GAACCGTGATCGCAG  57 90
        dnaE 2990893 .. 2990903 -  -5.4  -2.90615   ATTGTTCTGAAACCA                 TGAC CCG GTCA                 CTGCCGGGCCGTTCA  48 89
LQF05_RS13720 2989786 .. 2989826 - -13.4   -3.1247   AGGCCCGACAGCGAA TCCTG-GCGTGCCTCG-CTC AGA GAGGCGAAGCACGCACAGGG ATGACTCAGGCGATA  76 31
        tilS 2988303 .. 2988332 -  -3.5  -3.27525   CCGGGGGAAAGCGAA       GGTGCCATTGCGCG GAT CG-GCAATAGCGCA       ACTGCCACGGATTCG  47 110
LQF05_RS13710 NONE
        kdsA NONE
         eno 2984416 .. 2984433 - -10.5  -5.65927   GATTGAAACAAAAAA             GGGCGAC TCGC GCCGCCC              TTTTTTAATGCCGCA 100 44
        ftsB NONE
        ispD 2982892 .. 2982902 -  -2.4  -3.57039   CAGCCATAACGAGAA                 CCTG CTG CCGG                 AAGGCATCGAGATCG  50 455
LQF05_RS13670 2979431 .. 2979446 -  -8.2  -3.31144   GGTCGAGGTGGACAA              GCCGCC GAAC GACGGC               GTCCACCCAGTGGAT  59 40
        fghA 2978453 .. 2978479 - -20.9  -3.64703   TCCTGGCGATGGAAA         GGCCCGAGCGG CATGT CCGCTCGGGCC         TTTTTTGTGGCTGAC 100 76
        ispF NONE
        truD NONE
        surE NONE
LQF05_RS13635 NONE
LQF05_RS13630 2972971 .. 2972984 -  -3.1  -3.58726   CCCTTTCATAGACAA               GTGCGT CAG ACGC-C               TTCGGTCATCGGCTG  51 17
LQF05_RS13625 2972023 .. 2972063 -  -2.3  -3.31144   TTCCGAGTTCGACAA  CAGGCCCAAGCGACGCGGG TCC CTGGCTACGCTCAAGCCTA  ACCTAGTGCTGGAAC  44 55
        rpoS 2970527 .. 2970548 - -12.9  -5.75342   GGCGGGCAAAAAAAA           GGGGCGGGG TTGA CCCCGCCCG            CCTCCTTCCCTGTTC 100 473
LQF05_RS13615 2970213 .. 2970261 - -10.7  -2.79183   GCGAGCGCGAGGACA TCGCGCCCCTGCTACGCCGGCAT ATC ATGCCCGCGCTGCTGGCCCGCGC GGCGCAAGCCGGGAG  60 70
LQF05_RS13605 2967313 .. 2967343 -  -7.5  -4.79756   GACACAACTCAAAAA       CGGGGCGTTATAT ATGTA ACGAAACGCCCCG       CTATTTAACCTGCCA  85 30
LQF05_RS13600 2966528 .. 2966558 - -10.3  -5.31059   ACAGGAAGTAAAAAA       GTTGCGCGACGCC AACGA GGCGCCGCGCATG       CTTCGATCAGTAATT 100 32
LQF05_RS13580 2963777 .. 2963809 - -10.5  -3.39327   CCGCTATACCGACAA      CCAGTACCAGGCCGA AGC CCGGCCCGGCAGTGA      TCTGGGCCCGAAGGA  67 119
LQF05_RS13565 2961630 .. 2961649 - -16.4  -3.31144   GCCTGATCGCCACAA            CGCCCGGC TGAT GCCGGGCG             TTTTCAGACGCGCGC  89 29
         dgt 2958700 .. 2958719 -   -10  -3.26947   CAATGCCTATACCAA            GCGCAGCGC TGA GCGCTGC-C            GAGACCGGCTTCAGC  65 60
LQF05_RS13530 2955851 .. 2955870 -   -10  -3.28712   GCGGCTGGCCGAGAA            CGG-CGGCA ATG TGCCGGCCG            ATCTGCTGGATTGAG  68 87
LQF05_RS13520 2954463 .. 2954495 - -14.2  -2.85668   CATCGGTATAGCACA     GTCCGCCGA-CCGCG CCTG CGCGGATCGACGAAC      GTGCCGCTCATGCAT  75 33
LQF05_RS13515 2954024 .. 2954049 - -18.3  -5.22006   CCAGGACAACAAAAA         CGCGCCGAACG CAGG CGTCCGGCGCG          CAGTAGCAAGAGCGG 100 41
LQF05_RS13510 2953272 .. 2953288 - -12.3  -2.57463   AAGCTGGCCGAGAAT              GGCGGAA GCA TTCCGCC              GGAACTGCTGCACTG  68 84
LQF05_RS13490 2950195 .. 2950212 -    -4  -3.63895   TGCAACGAGCTTAAA             GCTGCC ATCGAA GGCGGC              GCCGACTTCGCCCAG  53 314
LQF05_RS13430 2937056 .. 2937070 -  -4.9  -4.93365   GCCGAGAATGAAAAA               GCCGC CCGAC GCGAC               AACACTGCTGGGCGC  81 65
LQF05_RS13420 2934194 .. 2934208 -  -8.5  -3.78953   AGGCCCATGAGGAAA               CCGGC GAAGT GCCGG               TGATGATCACCAAGC  67 405
LQF05_RS13400 2929619 .. 2929634 -  -2.4  -3.18264   GGCTCGACGCAGCAA              CGGGCC GGCC AGCACG               GGCGGCAGATCCTGG  43 149
LQF05_RS13395 2927363 .. 2927399 -  -2.7  -3.35798   AGTCGCGATCGACAA    CTTCATCGATGCCAGCG TGC CCCAGGCCACGACGATG    GGCATCGTCGGCACC  45 349
LQF05_RS13385 NONE
LQF05_RS13380 2926286 .. 2926318 - -14.7  -2.75064   GCCTTCAGCCAAGGA      TGCCGCACCGGCCTC AGG GCGGCCGGCGCAGCG      CGCTTTTTAGGCCGG  77 77
LQF05_RS13375 2925773 .. 2925787 -  -4.2   -3.6682   CCCGACCCAGGCAAA               CGCTAC ACC GCAGCA               GCCTGGTGCGGCGTG  53 371
        fliE NONE
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ 2918858 .. 2918889 -  -3.6  -3.27298   CGCGGCAAGCACGAA      TCCCGCCGGAGC-CG CCT CGTGCTGCCGCGAAA      CAGAGCCGGTGCCAC  47 41
LQF05_RS13335 NONE
LQF05_RS13330 2916606 .. 2916616 -  -3.2  -2.62184   GCGCTGTCGAGATGA                 GCGT TGG ACAC                 CGCGGCACTCCAGTC  40 53
LQF05_RS13325 2916187 .. 2916218 -  -7.2  -3.61398   GCCCTGTCGGAACAA      GCTGAACC-GCGCGC TTG ACGGGCAGGTTCGGC      CGCATCGCCTGGCCG  60 73
LQF05_RS13320 2914689 .. 2914718 -  -5.6   -3.1372   GAGTTCGGAGCAACA       GCTGTGCCAACG TCCTTT CACCGGCACGGC        TACGGCGCCAGCCAA  50 184
        fliL 2914080 .. 2914091 -  -3.6   -3.0263   AGCAGGTCTTGAACA                GCCA TCTG CGGC                 AGCCTTCTATTGCAA  43 32
        fliM 2913106 .. 2913118 -  -3.3  -2.87319   TCGAATTGAGTAAAG                GGCTG GTT CAGCG                TGGGCGAACCACGGG  42 20
        fliN 2912574 .. 2912592 -    -3  -2.57344   GAGCGCGGCCAGAAT             TGCCAGGC CAC GCATGTCA             GCGCAACTTCTTGAT  38 23
        fliO 2912169 .. 2912185 -  -2.2  -3.07233   GCAGAATGCGCAACA              TCAAGG CTTGT CCTTGT              GATCCTTGCCGAGCA  41 9
        fliP NONE
        fliQ NONE
        fliR NONE
        flhB 2908660 .. 2908696 -  -9.3  -3.57144   CCGCCCAGGCGGAAA    CCCTGAGCGTCAAGGTC AAC GCCGTTACCGCCCAGGG    AATTGGCGAATCCGT  68 489
        flhA NONE
        flhF NONE
        fleN 2904017 .. 2904027 -  -2.4  -3.09273   TTGCTGTAATACATA                 GCGG ATC CGGC                 ACCTGTCATTCGTGA  41 31
        fliA 2903284 .. 2903296 -  -4.9  -3.63805   ACGTCATACCGCAAA                CAATT GTC AATTG                GCGCGCCATTCGCCG  54 19
LQF05_RS13250 NONE
LQF05_RS13245 NONE
LQF05_RS13240 2899727 .. 2899739 -  -4.1  -2.88544   CTTGACTGCCATACA                TCACT CCT AGCGA                CAGCGCCGCACACAG  42 60
LQF05_RS13235 NONE
LQF05_RS13230 NONE
        motD NONE
LQF05_RS13220 NONE
LQF05_RS13215 NONE
LQF05_RS13210 NONE
LQF05_RS13205 2894181 .. 2894191 -  -2.4  -3.19192   GCTCAGCGAAGCCAA                 GCCG ATA CGGT                 GTTGGAATATGGGGG  43 88
LQF05_RS13200 2893390 .. 2893434 -  -2.8  -2.85216   CATGACCGACAAGCA GCCGCGCCAA-GCCATCGC CCTGAGCT ACGACGGCGTCAACGCGCC GAGCCTCAGCGCCAA  41 280
        ccmA NONE
        ccmB NONE
LQF05_RS13175 NONE
        ccmD NONE
        ccmE NONE
LQF05_RS13160 2886968 .. 2886980 -  -4.7  -2.62263   AGTCTTTTCACATCA                GGCTC CTT GCGCC                GCCATACCCAATGCT  43 10
LQF05_RS13155 NONE
LQF05_RS13150 NONE
        ccmI NONE
LQF05_RS13140 2884240 .. 2884261 -  -6.5  -2.53263   CTTATCGGCAATCGA           CGCTCAGCC TTTA GACCGAACG            GCAAAAAGACTGCCT  48 52
LQF05_RS13135 2883722 .. 2883742 - -13.3  -2.80821   GCGTCAAACAGATGA            CCGCCAGTG CGG CACTGGCGA            CATAATGCCACATAC  73 133
LQF05_RS13130 2881962 .. 2881979 - -12.7  -4.39571   CCCAGAAACGCAAAA             GGCCACC CGAA GGTGGCC              TTTGTCATGCACCAA 100 43
LQF05_RS13125 NONE
LQF05_RS13120 NONE
LQF05_RS13115 2878457 .. 2878506 -   -10  -3.17392   CACGCTGCAAGGCAA TGTCGACC-AGTTGATGGCGGAC ATGCA GCGCGCCATCGACGAGGCCGACA CCTTTATCCGCAGAC  65 80
        msrB NONE
LQF05_RS13085 2873930 .. 2873947 - -12.7  -5.28983   TCCAAAACAGAAAAA             GTCCGGC CGAA GCCGGAC              CAGACATCAACGCCT 100 73
LQF05_RS13080 2872892 .. 2872905 -  -3.7  -3.64703   GCCCCGCCATCGAAA               GCCTG CTGC CGGGC                GAGCAACGCATGAAT  53 137
LQF05_RS13065 2871169 .. 2871179 -  -2.4  -5.20333   TATCTACAACAAAAA                 GTGG CGT CCCC                 TAGGGGACTCGAACC  83 16
LQF05_RS13060 2871008 .. 2871040 -   -13   -4.3208   GTCGAGAACGCAAAA     CGAAAAAAAGCGACC CTTA GGTCGCTTTTTTT-G      ATTCCTCGCAAGCCT 100 62
LQF05_RS13050 NONE
LQF05_RS13045 NONE
LQF05_RS13040 2869241 .. 2869254 -  -6.7  -3.28924   CATTGGCTTTCATAA               TGACC TCCC GGTCA                GCAAGCGCGCCGGCG  56 23
LQF05_RS13035 2868997 .. 2869026 - -12.9  -5.24531   ATCCTCGATAAAAAA       GAAGAGGCCGACA TGAT CGTCGGCCTCTTT        TCAAACGCACGTCAG 100 37
LQF05_RS12995 2859697 .. 2859722 -  -7.5  -3.28791   ACCGCTCGCCGACAA         TGCTGACGAGC GCGG ACGCGCCAGCA          ACCGCCGCGTCGAGC  57 77
         ffs NONE
LQF05_RS12970 2855178 .. 2855202 - -10.1  -3.78775   TGGGCGATGACGAAA          TTACCACTTGC CAG GTAAGTGGTAA          TCGAGAGCAGGCCTA  76 38
LQF05_RS12950 NONE
LQF05_RS12945 NONE
LQF05_RS12940 2848922 .. 2848943 -  -3.5   -4.2828   TGGGACTCAGGAAAA           GACCCGCGG GCGC CCTCTGGCC            CAGGACGAGAAGGGA  62 376
LQF05_RS12925 2843586 .. 2843598 -  -4.8  -3.17075   GCCGCGTGAAGCGAA                CGCA TTACT TGCG                TCAATTACGCCAGCA  48 428
         ffs 2842657 .. 2842667 -  -8.2  -2.71268   GCGCAGGATACATGA                 GCCG ATC CGGC                 GTGAAGAACCGCGTG  53 146
        earP 2841446 .. 2841462 -  -2.1  -4.51477   AGAGACAAAAAAACA              GGCCGCG TAT CATAGCC              AATCTGTGTAAAAAA  66 18
         efp 2840797 .. 2840815 - -11.7  -5.07011   CACAGAAACGAAAAA             GCCCAGC ATCGA GCTGGGC             TTTTTTCTGTCCACC 100 53
LQF05_RS12895 2836842 .. 2836863 -  -8.6  -3.53012   GCGGGTGCGTCGAAA           CGCCGCGG GCAGGT CCTCGGCG            GTATGCCGACATAAG  62 110
LQF05_RS12890 2834468 .. 2834487 - -12.1  -3.64703   CGCCTCCCAGCGAAA            CCGGCGG GAGGCG CCGCCGG             AGATCAGGCCGCTTC  82 29
LQF05_RS12885 2832459 .. 2832478 -   -15  -5.28176   TGCAGGCATAAAAAA            GGCGGGCT CTAG AGCCCGCC             TGCTTTTAGCTACGA 100 45
        ihfB 2831833 .. 2831845 -  -5.5  -3.84246   CCTGCAATGATGAAA                GGCTC TCT GAACC                CTAAATCGCGGGCGC  60 143
LQF05_RS12875 NONE
        wbpA 2829773 .. 2829804 -  -9.4  -5.24129   TTCCTTTACAAAAAA      CTCAGCCCGACAAGC AGC GCA-GCCGGGCTAAG      GCATAATCTCGTGAT 100 47
        wbpB NONE
        wbpD NONE
LQF05_RS12855 NONE
LQF05_RS12850 NONE
LQF05_RS12845 NONE
LQF05_RS12840 NONE
LQF05_RS12835 NONE
LQF05_RS12830 2819962 .. 2819978 -  -9.3  -2.78384   GGCTGCCTCAGGACA              CCAGCCG CTA CGGCAGG              GCGCCAGTTCGTTCT  57 96
LQF05_RS12825 NONE
LQF05_RS12820 NONE
LQF05_RS12815 NONE
LQF05_RS12810 2815523 .. 2815536 -  -6.7  -3.21416   TAGGGGGAGCAGGAA               TCCCT CGAC AGGGA                ACCGATGAACCTTAA  54 69
LQF05_RS12805 NONE
LQF05_RS12800 2812210 .. 2812221 -  -3.6  -4.65916   GTCACTCGAACAAAA                GACC GCTG GGCC                 TACGGAGCTATCAAG  70 72
         pap 2808909 .. 2808948 -  -2.9  -2.94199   CATTCAGCAAGCATA TGC-ACGGCCATTGCCTCA CGGG TCAGGC-ATGCCCGCGGCA  GGCGTTTGAGCAATC  40 120
LQF05_RS12780 2807528 .. 2807557 - -19.4  -6.11644   CCAGGCAAAAAAAAA       CGGGCCTGCTAC AGCTTG GTAGCAGGCCCG        TTTCTGTGAGCAGCT 100 50
        yegS NONE
LQF05_RS12715 2791243 .. 2791279 - -11.7  -2.95774   TAGAGCGAGGAGAGA   TGCATGCTGCGCCTCC TTGGGG GAAAGCGCAGCA-GCA    TAGCAGGGGCGGCTG  66 72
LQF05_RS12710 2790061 .. 2790071 -  -2.4  -3.91798   CAACCGCCAAGGAAA                 CCGC CAA GCGC                 TTCAACATCCCGCTG  55 401
LQF05_RS12700 2786162 .. 2786173 -  -7.2  -2.77182   CCGGATACTTAACTA                CGCG CCAG CGCG                 CATGGCATTGATCCA  50 123
LQF05_RS12695 2785380 .. 2785422 - -25.7  -2.80411   AAAAAAGCGGAATGA CAGCCCCGACCGCGCAGCGC GATG GCGCTGCGCGGTCGCGG-TG ATCAGAAGAGCTCCA 100 27
LQF05_RS12685 NONE
LQF05_RS12680 NONE
LQF05_RS12675 2782863 .. 2782888 - -12.5  -2.52464   TTCCTGGCCAAGTGA         GCGGTCGGCAC CTGG GCGGCGACCGC          TGAGCGCACGGCGAT  68 46
        cysK 2777954 .. 2777999 - -11.7  -3.14564   TGATCCTGCGACCAA CGCCGCCAGCCCAGCCACAGG CGGA CCTGCGACGCGGCTGACATCG CAGCCGCGCCGCGAG  69 46
        aceK 2775098 .. 2775113 -  -2.5  -2.67747   TGTGGACAGCATAAT              CCAAG TTCCGG CCTGG               TGCTCGCACGCAATG  38 142
LQF05_RS12635 2774859 .. 2774909 - -14.7  -3.14132   CGGCCCGCCTATCAA CGAGCCGTCG-AACGCGGCGGACCG GCC CTGCCCACCGCGTGACG-CGGCTCA GCGTTGGGCGCGACG  82 23
LQF05_RS12625 2773482 .. 2773499 -  -3.3  -4.42386   TCCTCAGGCAGAAAA             CCCTGGC GGTC GCCAAGC              AGCCCGAGCCGCGCT  65 89
        recQ 2769871 .. 2769881 -    -4  -4.57569   CCATTCCTGCAAAAA                 CTAA TTA TTAG                 TGAGCTAACCACAGC  68 175
LQF05_RS12605 2769016 .. 2769034 -  -5.3  -3.33737   CATCAAGCTGGACAA            GGCACTCA GCCA TG-GTGCC             AACACCTGGGTGCTG  51 409
LQF05_RS12595 2766752 .. 2766765 -  -8.1  -2.70932   GTGGCTGTTCAACGA               GCAGC CAAC GCTGC                GCATGCTGATCGGTG  51 142
LQF05_RS12570 NONE
LQF05_RS12565 2760631 .. 2760641 -  -6.8  -3.34233   GTACAACGGCCACAA                 CCTC GAC GAGG                 AAATCGTCCGTTCGA  55 313
LQF05_RS12555 NONE
LQF05_RS12550 2757864 .. 2757879 -  -5.4  -2.54896   CCCCCACGCAACGTA              TCGACA GTCG CGTCGA               ACCCGGCATCCGCTA  43 407
LQF05_RS12520 NONE
LQF05_RS12515 2752729 .. 2752742 -  -2.4  -2.77962   GCGCATACCGGAAAC               CACA CGCCGC TGTG                AATCCATGGAGCTCA  39 241
LQF05_RS12510 NONE
LQF05_RS12505 NONE
        scpB 2749782 .. 2749799 -  -6.9   -4.1021   TTCGACAACCATAAA             CCATCCG GAGT CGGTTGG              CGTTCGGACAGGACG  68 137
         edd NONE
LQF05_RS12490 NONE
LQF05_RS12485 NONE
LQF05_RS12480 2744688 .. 2744713 -  -3.2  -3.87869   CCAACCGGTTACAAA         GGCACGCC ACAGGTAACA GGCACGCC          CGGCGGGCGTCAGCG  56 35
LQF05_RS12475 NONE
LQF05_RS12470 NONE
LQF05_RS12465 NONE
        ugpC 2740261 .. 2740284 - -11.7  -2.52464   CCTGCTGGCAAGGCA          GGCCGGTAC CTCACT GCACCGGCC           CCGCTCCGTTGGAAA  64 12
LQF05_RS12455 2738806 .. 2738822 -  -2.9  -4.26076   GCAGGCGCAGGAAAA              CCAGATC CGC GACCTGC              AGGAGCGCATCGCCC  64 146
        aroC 2735810 .. 2735864 - -10.5  -3.05844   GCGGTCATGGCAACA GGCGTTCAGTTTGCAGCGCGC-GGCG TCAA CGCCGGCGCGCCGCGCTCCGAATGGC CGCTCAAAGCTGACC  64 29
LQF05_RS12435 2734427 .. 2734457 -    -9  -2.70932   CGGCTCTCCGAAGGA      TC-GCCCGGCCGA TCACTG CCGGCCAGGCAGA       AATTCATCTGTTGTG  57 219
LQF05_RS12425 2733776 .. 2733792 -  -5.7  -2.72344   GTTCATGGTTAACGA              GCACGCC GCT GGCGCGG              GTCGGCAGGAGGCCA  46 96
LQF05_RS12420 NONE
LQF05_RS12415 NONE
LQF05_RS12410 2732338 .. 2732389 -   -15  -2.52623   CCCGCTGGAGAACAT CGGCATGCCGGCCAAGCGCGCTCAG GCG CTGCGC-CGCCTGGCCGGCGCGGTG GCCGAGGGCGCGTTG  73 319
        speE 2730700 .. 2730726 - -20.8  -4.27316   GCCGGCAATGCAAAA         CGGCCCGCCCCG TTG CCGGGCGGGCCG         TTCAGGGCGATGCCG 100 51
LQF05_RS12395 2729772 .. 2729787 -  -2.4  -4.63218   GCGCTTCGAACAAAA              CGGCCG ATCG CAGCTG               TTGCGCCCGGGGCGC  70 335
LQF05_RS12385 2727938 .. 2727955 -  -6.9  -3.14132   CGGCGCCTCGATGAA             CAGCGGC CCAA GCGGCTG              GCTCGGCGCAACCAT  51 345
LQF05_RS12370 2724942 .. 2724959 - -11.3  -3.15663   ATCCAGCTGCATCAA             TCGCCTC CGCC GAGGCGA              CTGCCCCAGCCCAGC  69 4
LQF05_RS12365 NONE
LQF05_RS12360 2723103 .. 2723130 - -12.6  -4.18018   GCGCTTTAGGGAAAA        GCGCGACAGCCC GCTA GCGCCGCCGCGC         CAGGGTGCCGCCGAT  95 11
LQF05_RS12355 NONE
LQF05_RS12350 2721839 .. 2721849 -  -2.4  -3.30124   TTGTAGGGTGGAGAA                 CGGC AAA GCCT                 GCTCCACCCCTTGTT  44 103
        pepN 2719013 .. 2719042 - -14.3  -3.57462   CACCCTACCGGCAAA       GACGGCCGATCGC GGGC ACGATCGGCCTTC        GGACTCAGGCGAGGC  90 30
LQF05_RS12340 NONE
LQF05_RS12335 2715197 .. 2715216 - -16.4  -5.47218   TTCCACTCAAAAAAA            CCGCGGCC CAAG GGCCGCGG             TTCTTCGCTACATCC 100 45
LQF05_RS12310 2707863 .. 2707873 -  -4.6  -3.53811   GCCAGCGCTTCGAAA                 CCGC CGA GCAG                 TGGTTGCTGGAACTG  53 183
LQF05_RS12295 2703282 .. 2703322 -  -4.5  -3.06183   TCCATTCGCAGTCAA  TACCGCTCCCGCGCCTGCC CCG GGCAAGTGACGCAGCGCTA  GAATGCCCGCCTTCA  46 500
LQF05_RS12240 2688317 .. 2688338 - -17.3  -5.64421   AGCTCAAATAAAAAA           GCGCACCGC TGTC GCGGTGCGC            TTTTTTTGTGTTTGA 100 86
LQF05_RS12230 2686951 .. 2686967 -  -4.3  -3.72576   CGGCGGGTGATGAAA              TACGGGC GTC GCCAGCA              GTCGGCGAGCGCGTC  57 39
LQF05_RS12225 2685423 .. 2685465 - -10.5  -2.73364   CCGTCATCGCAAGGA TGTCG-GCGAGGCGCGCCAC GCCG GCAGCGCGCCTCAATCGGCA GTCTATCTGCCCGGT  61 398
       rlmKL 2682958 .. 2682982 - -12.8  -4.04206   TGATCGCTACAGAAA          GAGCGGGCCT GCCCG AGGCCCGCGC          AGAACCGTCATCACC  89 36
LQF05_RS12205 2680710 .. 2680722 -  -5.5  -3.85698   TGCTGCTGGCAGAAA                CCCTG GCG CAGGA                TTGGAACCTGCCGCA  62 181
LQF05_RS12170 2674943 .. 2674958 -  -8.2  -5.34555   GCAGACCATAAAAAA              CCGGCC AACG AGCCGG               TTTTTTTATGCATGT 100 49
LQF05_RS12150 2672464 .. 2672494 -  -4.8  -3.09968   GACTGAACCTCAACA      CTGACGCAAATCT GACCAT AGACC-GCGTCAG       CTGCGGCTGAACCCG  46 106
LQF05_RS12140 NONE
LQF05_RS12135 2670315 .. 2670335 -  -4.8  -4.14472   CGAAGATGCTGAAAA           CATTC-CCA CAGC TGGCGAATG            TGAAAGTCGACTACG  64 315
LQF05_RS12125 2669072 .. 2669089 - -12.7  -5.81412   GCGAGCCAAAAAAAA             GGGTCGC TTGC GCGACCC              TTTTTCGAATTGGTA 100 36
        thrS NONE
        infC 2666360 .. 2666371 -    -3  -3.05816   GTACTCCGCATTCAA                TAAC AACA GTTA                 ACCATCAGGCCTGCC  41 54
        rpmI 2666155 .. 2666167 -  -9.1  -2.63901   ACCGGATCAACGAAC                GCGCA GCA TGCGC                TCCACTTTTGCAACG  56 4
        rplT 2665690 .. 2665718 - -17.6  -3.88498   CTTCCAGATACGAAA        TAGGGGAAGAGC ACAAG GCTCTTCCCCTA        TCGATGACTTGCAAC 100 69
        pheS NONE
        pheT NONE
        ihfA NONE
LQF05_RS12085 2661433 .. 2661455 -  -6.2  -3.14564   CTACGCCCCGACGAA           TGCTGTCAGC ACT GCTGAAAGCG           GATCGAACTATACAT  50 83
LQF05_RS12080 2661310 .. 2661333 - -16.8  -4.67038   TCCTTAAAACGAAAA          GGCCAGCTCA TCTC TGAGCTGGCC           TAAGTCGTGGAGTTA 100 43
LQF05_RS12055 2653524 .. 2653534 -  -2.4  -4.25104   TTTCGCCGAGTAAAA                 GGCC GCT GGCG                 AGTGATACCGATCAA  60 141
LQF05_RS12050 2651543 .. 2651553 -  -2.4  -2.60723   CGATCCCGAATGAAT                 GCTC ACT GGGC                 GTCCCGCGCTTCTTG  38 17
LQF05_RS12045 NONE
LQF05_RS12020 2645604 .. 2645615 -  -7.2  -3.89756   ATGCGAAAGCAAGAA                GGCC CACT GGCC                 TGAACCACCAGAGCT  64 354
        mtnA 2637379 .. 2637403 - -10.8  -2.91274   CCGAGGCGAAGGACA         TGCGCAGCCAT CGAA ATGGC-GCGCA          AGGTCGGCAGCGATT  62 41
        gyrA NONE
        serC NONE
        pheA 2632105 .. 2632118 -  -2.3  -3.02166   GCCGCAATTAAAGTA               CTGCC TTGG GGTAG                GAACCCAGCACCTTC  41 4
        hisC NONE
LQF05_RS11970 NONE
         cmk 2627869 .. 2627902 -  -3.1  -5.72616   ATTCATATAAAAAAA     GGCCTGCGGGA CTGGATCTGGTC TCCCACATGCC      TCCTTGTTAACGGCT  95 103
        rpsA 2626069 .. 2626086 - -12.7  -5.28176   CGCAGGCACAAAAAA             GGGCGAC CGAA GTCGCCC              TTTTTCATGAAGAAC 100 46
LQF05_RS11950 NONE
LQF05_RS11945 2623434 .. 2623473 -  -3.4  -4.29738   GCAGATTCAGGAAAA  CCTGACCCGCGAGATCGC CGAA GCGATGCAGCAGGTCACC   GGAGCCTCCGGTGTA  64 228
        prmB 2620548 .. 2620573 -  -3.9  -2.82775   TCCAGAGAAAACCGA         TCAGCTCTCCGC CAG GCGC-GAGCGGA         ACAGTGCCTGATGCT  41 0
         zwf NONE
         pgl NONE
LQF05_RS11910 2617518 .. 2617531 -  -3.7  -3.61178   CCGACCTAGGGCAAA               GCGGC CAGG GCCTC                CGCGGTACGCTGCTG  51 2
LQF05_RS11905 2616233 .. 2616268 - -15.5  -3.34895   TGGACGCGCAATGAA    GTCCGCGCAGCGCAGT CATCC ACTGCGCTGCGCTG-C    AGACCGCTCAGGGAC  89 33
LQF05_RS11880 NONE
LQF05_RS11875 NONE
LQF05_RS11870 2609878 .. 2609898 -  -2.6  -4.09243   GACATTCGCCGAAAA            TTTGCATA GAGAA CACGCAAA            TTTTACCTTGACGCG  57 201
LQF05_RS11865 2606908 .. 2606922 -  -2.8  -3.03243   ACTTACCGTCTAACA               GCCAAA TTG TTTGGG               TGTTATATGGTCAAG  41 32
         rrf 2606634 .. 2606671 - -22.1  -4.07568   TCTGCCGTCCCAAAA   GCAAACCCCCGACCCGC TTAC GCGGATCGGGGGTTTGG    TGTAGGAGCTTGACG 100 33
        queD 2605987 .. 2606024 -  -4.9   -4.1585   GCAGAACTGTCAAAA   TCGGAACG-GCACATTCA GGA CGAATGAGCGCATTCTGA   GTTGTCAGTAGCCGT  65 107
LQF05_RS11850 2604515 .. 2604528 -  -3.7  -3.05384   GTTCTGTTTAGTCAA               CGAGC GAGA GCGCG                AGTGCGGGCCAGACG  43 91
LQF05_RS11845 2603373 .. 2603410 - -10.6  -3.64822   AGCGCCTGATGTAAA  CGCCA-AGG-GGCCTGGC GAGC GCCAGGCCTCCCGTGTCG   GCAATCATTGGCCCG  73 30
         icd 2588303 .. 2588322 - -13.6  -5.99154   GAGCAAACAAAAAAA            GGCCGATC AATC GATCGGCC             TTTTTACCCACTTGC 100 41
        clpS NONE
        clpA 2585098 .. 2585117 - -16.4  -4.61873   CCGCACAAACGAAAA            CGCCCGGC AAAA GCCGGGCG             CTCGTTGAACGGCCG 100 41
        ftsK NONE
        lolA 2578983 .. 2579019 -  -3.6  -4.56597   GCCCGCCGTGAAAAA   CGGATGCCGAACGCCGA TCAC TCGGCGAT-GACGTCGG    CCCCTTCGGGAATCT  68 6
LQF05_RS11735 NONE
        crcB 2577236 .. 2577251 -  -6.8  -3.28712   GCCGTCGGTTCATAA              CCTGGC GAGC GCCAGA               CCCGCCCATGCCGCG  56 4
        serS 2575830 .. 2575852 -  -2.5  -3.36273   CTTGTCGAAGATCAA           GGATCCGGC CTGAT GCCAGGACC           GCGTTGACGCAGCGC  44 50
        cysG 2574335 .. 2574378 - -10.1  -3.01712   CTGCGCCGCTGAACA CGGCGCAGGCAGCAGCCAG CCCTAT CGACCCGCCGCCTGCGCCC CTTCGAACCAGGCGA  64 3
LQF05_RS11675 NONE
LQF05_RS11670 NONE
LQF05_RS11665 2563377 .. 2563401 - -12.9  -3.12351   TGCGCCGACAGGGAA          GATTTCCCGGC CCT GGCGGGAAATC          TTCCCGATTGCCAGG  72 213
LQF05_RS11660 2560898 .. 2560947 -  -7.8  -3.14132   CGCCCGCCGTAGCAA TCGCCCA-TGAGCGCTTCG-TGGG CCTG CCCAGCGCGGCGCTCGGCAGGCGA CTGCGCGTCCGGATC  57 43
        pedF NONE
LQF05_RS11630 2553785 .. 2553824 -  -2.9  -3.29958   TCAACAACAGCAAGA TCCGGA-CGCTCATGTCGA CTCC TCGAAACG-GCGATCCGCA  ACGGGATCGGTATCG  44 76
LQF05_RS11625 2552999 .. 2553011 -  -6.9  -3.32456   AAATCAGAATGAACA                GGCGC ATG ACGCC                TCCTTGGCTGGGTTA  56 65
LQF05_RS11620 NONE
LQF05_RS11610 2548700 .. 2548730 - -19.1  -3.52906   GCAGGCGCAGAAACA       CGAAACCCCGGCC GTGAT GACCGGGGTTTCG       CACACGGAGCCCGGC 100 71
LQF05_RS11600 2546662 .. 2546694 - -14.2  -3.64703   GCCCGCCTACGTAAA     GCACCGAACCCCGCC TACT GGCGGGGTTC-GTGT      TTCTAGGGCGGCATC  88 39
LQF05_RS11565 2536703 .. 2536723 -  -9.6  -3.65201   CAAGACCTGGAACAA            GGGCGCCG ACGTG CTGCGCCC            TGGTCAACTGCTGAC  68 65
LQF05_RS11550 NONE
        rnhA NONE
        dnaQ NONE
LQF05_RS11535 2529759 .. 2529783 -  -4.1   -2.9039   AGACGATGTGATACA          GACCACGCCGC CGG ACGGCCCGTTC          GTGCCGATGTAGAGC  42 57
LQF05_RS11530 2528811 .. 2528831 -  -3.9  -3.53012   CGCCTCCCGCGCAAA            CGTGTGATG GCG CATCAGTCG            GCAAAGTCCGGCTTC  49 19
LQF05_RS11525 NONE
        nudC 2525851 .. 2525887 -  -9.9  -2.71263   AAGCTGGCTCAATCA    GCTGCTGCCGCTGGTGG TGT CCGCCTGCGGCATCTAC    CTGCTGTTCAGCAAA  56 413
LQF05_RS11510 2524641 .. 2524659 - -11.7  -4.81551   CAGCCAGATGAAAAA             GGGAGCC GCAAT GGCTCCC             TTTTGTCATCTGCAC 100 43
        sohB NONE
LQF05_RS11480 2518993 .. 2519010 - -14.1  -4.30014   GCCAGCAAGTGAAAA             GCCCGCC AATT GGCGGGC              TTTTCATTGGCGTCA 100 253
LQF05_RS11435 NONE
LQF05_RS11430 2509494 .. 2509522 -  -5.1  -3.14132   CGCTTCTGTGAGCAA        TGCCGTGACTGGC TTC GGCAGCATCGGCA        GCCGTTCGTTGAAAT  47 113
LQF05_RS11415 2506951 .. 2506987 -  -9.3  -2.78712   CGCCGAAGCCAACCA    GCCGTTCGCCAGCGAGG CCA CCTTGCTGACCATCGAC    CTGGTGGACGGCCGG  58 233
LQF05_RS11400 2500523 .. 2500556 -  -3.8  -2.87463   AACTCCTCGCAGACA     TGCGTGGCAGTG TACGTCAAAC CACTGCCACGGT      TAAGTCCCAGTATTT  42 97
        nfuA 2499878 .. 2499920 - -14.8  -2.71791   ATTTTGCCTGGAAAC CTGCCGAACGGCCCGGCGG AAGCCG CCGCCGGGCCGC-CGCCAT CAGTAATAGGCGTTC  77 25
LQF05_RS11390 NONE
LQF05_RS11385 2497732 .. 2497742 -  -8.2  -2.52676   GAGCTGGTCAAGCTA                 CGCG CAG CGCG                 CAAGCGCAAATGGCT  52 111
LQF05_RS11350 2491746 .. 2491763 - -14.1  -5.75342   CCCCCCCAAAAAAAA             GCCCCGC ACTA GCGGGGC              TTTTCATTTCTTTGA 100 45
LQF05_RS11340 2487660 .. 2487682 -  -6.9  -4.60487   TACTACCGGGAAAAA           GGCTGGCTG TGACG CAGCCGACC           GCCGTCAGAGCGCCA  78 30
LQF05_RS11325 NONE
        zapE 2483004 .. 2483026 -    -9  -3.73068   CGCGCAACTGAAGAA           GCGCCTGGCC AAC GGCGAGGCGT           TCGACGTGCTGGCCC  67 204
LQF05_RS11310 NONE
LQF05_RS11305 NONE
LQF05_RS11300 NONE
LQF05_RS11295 2478141 .. 2478153 -  -6.9  -3.53012   CCCTGGCGGGTGAAA                GCCCG CCT CAGGC                GCTGTCGCGCATTAC  58 20
LQF05_RS11285 2475787 .. 2475813 - -16.7  -5.61596   ACGGTCATAAAAAAA         GGCAAAGCCAC GGTGT GTGGCTTTGCC         TTTGGTCCTCTCCCC 100 52
LQF05_RS11230 NONE
LQF05_RS11225 NONE
LQF05_RS11220 2457265 .. 2457315 - -14.7  -2.52464   GGTCGCGGCAAGGGA GCGGC-CTG-ACCGGCGCACGGCGT CGG ACGCCACGCACCAGCGCCGTGCCGC GGTCAGAAATCGCGG  76 28
LQF05_RS11215 2455387 .. 2455413 - -19.4  -4.34402   TGGGTGACACGAAAA         GGCCGCGGGGCC ATC AGCCCCACGGCC         TGAAAGAGGGCCCGA 100 105
         tpx 2454810 .. 2454834 - -19.3  -6.06723   GTCGCCAAAAAAAAA          CGGCGAGCCCC ATC AGGGCTCGCCG          CCGAGCTGCTAGCGG 100 47
LQF05_RS11205 2453320 .. 2453341 - -17.3  -4.61873   TCGCACAAACGAAAA           GGCCGCTGC AGAT GCAGCGGCC            TTTTGCTGTGCGCGT 100 46
LQF05_RS11195 NONE
LQF05_RS11190 NONE
LQF05_RS11185 NONE
LQF05_RS11180 2442535 .. 2442554 - -12.8  -4.29508   ATCCAGATGAACAAA            GCCCCGCC AGCT AGCGGGGC             TTTTTTGTGTGGCCT 100 43
LQF05_RS11140 2431429 .. 2431447 - -11.6  -2.78384   TGCGGGGCGATGAGA             GGGCCCGG CCA CGGGGCCC             TCGCGGATCAGGAAA  65 33
LQF05_RS11135 NONE
LQF05_RS11130 NONE
        ligD 2428568 .. 2428584 - -15.1  -3.86897   TCGAGGGTGCACAAA              GGGCCGC TTA GCGGCCC              TCGCGCAACCGCTCG  93 16
        fdnG NONE
        fdxH NONE
LQF05_RS11110 NONE
        fdhE 2422657 .. 2422712 -  -3.3  -3.99324   CTGGACGAGCACAAA CCCGGCTCC-CCCTAT-GGCAACCA GACGGTGG TGGATGCCGATAGCGCGCAGCCGGC CTGAGCGCTACTCGC  56 33
LQF05_RS11095 2420110 .. 2420131 - -10.8  -3.33696   TCCTGTCGCAATGAA           GGGCCGCG GTCGTT CGCAGCCC            GGGCAACGACGAAAC  68 114
        treS NONE
        glgB 2414508 .. 2414533 - -18.3  -5.47821   ATTCACCTAAAAAAA         CGCCGCTCAGG TTGC CCCGAGCGGCG          TTCTTCATCGCTGCA 100 45
LQF05_RS11050 NONE
LQF05_RS11045 2406032 .. 2406051 -  -8.5   -3.1085   GCAAGTCAGGCAATA            CGGGCCG CAGTAC CGGCCCA             CACCTGCATTTCGTG  57 141
LQF05_RS11005 2393281 .. 2393301 -  -3.9  -2.58249   CACATCCGCGAGAAT            CTGCTGG GCTTCAT CCAGCGG            CAGTATCCGCATTCG  41 143
LQF05_RS10995 2391562 .. 2391572 -  -4.6  -3.13164   CGGGCAATCAGGCAA                 GCCG TCT CAGC                 GCTTGGCTTCGACGT  48 21
LQF05_RS10990 2391148 .. 2391165 -  -6.9  -3.51232   GCCCGCCGAAACGAA             TCGGAGC GTGC GCACCGA              GTGACCCGGCTCAGC  58 36
LQF05_RS10980 NONE
        ligD NONE
LQF05_RS10970 2385604 .. 2385621 -  -5.5  -3.92373   CAGCTGATCGACAAA             GGCATCC GGGT GAACGCC              GTGGCGCCCGGACCG  62 265
LQF05_RS10955 2381696 .. 2381725 -    -2  -4.21462   ATGGACCATTGAAAA       CGAAGTGCGACCG CCAAT CGGTTGCGCC-CG       CTGACGCCTCAATAG  60 34
LQF05_RS10920 2374502 .. 2374517 -  -4.8  -3.32159   CTATATCAAATTTAA              CATAAT ATAG ATTATG               CGAACTCACATGATA  49 123
LQF05_RS10915 2372810 .. 2372821 -  -2.2  -4.06786   ACTGAAGATTAGAAA                CG-GC GAA GCACG                TGAACCAAAGATTGG  57 246
LQF05_RS10910 2371118 .. 2371139 -  -5.1  -4.08216   GCATGCTGCCTAAAA           CCATCCATC TGTT AATGGAGGG            CGCGCCAGAAGGCGT  64 518
LQF05_RS10900 2369799 .. 2369814 - -10.4  -6.02919   CGAGAAACAAAAAAA              GCGCCT CGAA AGGCGC               TTAAATACAGCTTTA 100 91
LQF05_RS10880 2362179 .. 2362196 - -14.1  -5.64006   ACTCAAGCAAAAAAA             GGCGCCC CTAT GGGCGCC              TGAAACACATCTTCA 100 86
LQF05_RS10875 NONE
LQF05_RS10870 2359673 .. 2359687 -  -7.2  -2.94099   TTGGGTTAGTAGATA               CCTTTA GAT TAAAGG               GTTGACCCTTACCAG  51 225
LQF05_RS10865 2358848 .. 2358868 -  -2.5  -4.25283   ATGGGGTCATTAAAA            GCCCTATAG CTA CTACAAGGT            CAATAATGCAGAGCC  60 486
LQF05_RS10855 2357753 .. 2357767 -  -4.2  -4.41494   CAGCGTGAAGGAAAA               GCCG ATCAGTG CGGC               TTCGTCTCGCTGATG  69 175
LQF05_RS10830 2352606 .. 2352620 -  -5.7  -3.56099   GATAAGTTGGCGAAA               GCGTT GGGCG AACGC               ATCCGAGCGCAGAGA  57 304
LQF05_RS10820 NONE
LQF05_RS10815 2350509 .. 2350524 -  -6.8  -3.79902   AGAAATCAAAAGCAA              GCCAGC AACT GCTGAC               GATAGTGCTTGGAAA  63 0
LQF05_RS10810 NONE
LQF05_RS10805 2349486 .. 2349503 -  -9.9   -2.5619   TCAAAATCCATCAAT             GATCGGT CGAT ACCGATC              GCATTGGGCATCAAG  60 77
LQF05_RS10785 NONE
         prs 2342882 .. 2342909 -  -5.6  -3.62046   TTATCGTGTGAAGAA        TGGCGCCA TCTTACGCCGCT TGGCGCCA         GGCGCTACGTTCGGT  57 288
LQF05_RS10775 2342314 .. 2342343 - -13.6  -2.89683   ATCTGAGGGCAGACA       GGCGTGCCGC CTTGCGCGGC GCGGCACGCC        GCTCAGCTCAGTGAT  75 33
LQF05_RS10765 2340077 .. 2340101 -  -4.9   -4.1552   TACCGCCGGAAGAAA          CCAGCAAGTAC GGC GTGATTGCCGG          CGAGATGATTCGCGA  64 376
LQF05_RS10755 2337279 .. 2337316 - -19.1  -3.46982   CTCAGATCAAGAATA   GCGCCCCGCACCGCACC GCTG GGCGGGATGCAGGGCGC    AGAAGACGCGAGACC 100 63
        hemN 2335631 .. 2335649 -  -2.3  -4.10657   GCACATCCGGTAAAA            CTGGGGCG CGGG CGGCCC-G             CTCGAAAGCTGGCTA  57 126
LQF05_RS10745 NONE
LQF05_RS10740 2331666 .. 2331676 -  -6.8  -2.87243   GCAGGACTATAACCA                 GCCT CCG AGGC                 CCACGCAACCAGAAC  51 50
LQF05_RS10735 2331352 .. 2331369 -  -2.7   -2.7242   ATTAGCACAAATTTA             TTCTACA GATT TGTAGAG              ACGCCGATATTGCCC  39 181
LQF05_RS10730 NONE
LQF05_RS10725 NONE
LQF05_RS10720 2329827 .. 2329847 -  -5.3    -5.055   TCAAGGCTGAAAAAA            TGCTCTGCC GCG GGCATTGCA            GCCCGCTTCGGGGCT  85 69
LQF05_RS10715 2328497 .. 2328509 -  -4.8  -3.18849   CTGACATGATCAATA                GCTG TACTG CAGC                TGCGCCCAGAGCTTC  48 7
LQF05_RS10680 NONE
        arsB NONE
LQF05_RS10670 NONE
LQF05_RS10665 2319999 .. 2320012 -  -6.7  -2.71712   TCCGTGCCGTTAAAT               GCATC AAAT GATGC                GATGAGCCAGGCCCG  50 50
LQF05_RS10660 2319349 .. 2319374 - -17.7  -3.12327   CCTCCATATTGAAGA         GCCCCAAGCAA TTCG TTGCTTGGGGC          TTTTTATTTTGCGTC  89 386
LQF05_RS10625 2314805 .. 2314847 -  -4.7  -3.65046   GCTCTATCTGAAGAA CGCCTGGACCGAGCAGCAGC AAAA GGGGCTTCTCGA-CGAGGCG GCGCTGTGCGAGGCC  55 269
        pqqA NONE
        pqqD NONE
        pqqE 2295451 .. 2295463 -  -5.5  -3.11272   CAGCAGCAGGTAACA                GCCGA GTG TCAGC                GCAACCCCGGCGCCT  49 59
LQF05_RS10535 NONE
        serC NONE
LQF05_RS10525 2292944 .. 2292964 -   -14  -3.42996   CAGCACCCACGACAA            CGCCCCGA CTGGT TCGGGGCG            TTGTCGTTTCTGCCG  86 52
        folD 2281079 .. 2281116 - -27.3   -3.0976   CCGAATAGTCGAATA   CAAACAAGAACGGCGCC CAAG GGCGCCGTTCTTGTTTG    CGTCGTTCCCGATCA 100 38
LQF05_RS10450 NONE
        lpxH 2276035 .. 2276048 -  -3.7  -2.69598   ACTGCGAGAAAAAGG               CGGCG GGGT CGGCG                TTTCAGTTGATGTTC  42 499
LQF05_RS10435 2274848 .. 2274871 - -12.5  -3.32844   CTGCGCATCTGAGAA          CGAAAGCCC GCTGCA GGGCTTTCG           TTTCTACGGTATCAA  76 37
        acnB 2271312 .. 2271327 - -11.8  -5.24531   ACTGGGCATAAAAAA              CCCCGC CGGA GCGGGG               TTTTTTATTGCCTTA 100 49
LQF05_RS10385 2263137 .. 2263153 -  -9.4  -4.74103   CCTTGAACGCAAAAA              GTCCGC ACCAA GCGGAC              TTTTTGTTGTCTAGC 100 51
LQF05_RS10355 NONE
LQF05_RS10350 NONE
LQF05_RS10345 2252899 .. 2252929 - -21.1  -3.35679   TGGTCGGATCGATAA       GGGCCGGCCCGCG AGATG CGCGGGCCGGCCG       ATGGGTCAGTCGTGC 100 31
        pabB 2251471 .. 2251492 -  -3.7  -2.50113   CAGGAGTTCATCAAG           GCGTCGAACC GCA AGCT-GACGC           TCTGATCTGTCCGGA  40 71
LQF05_RS10330 2249816 .. 2249853 -   -12  -4.10657   GGACATGCTGGAAAA   GGCCATCCAGTGCCGC AACAAG GCGGAACTGGATGAGC    TGTTCGACGGCATGC  85 126
LQF05_RS10315 2246412 .. 2246427 - -11.8  -5.65177   AGAGCCATAAAAAAA              CGCCGG GAGA CCGGCG               TTTTTTTCTTCCTAG 100 37
LQF05_RS10305 2245430 .. 2245448 - -14.6  -5.24129   CGCGGGCATAAAAAA             GCCGACCT TGA AGGTCGGC             TTTTTTGCTTTTACA 100 44
LQF05_RS10285 2242713 .. 2242752 -  -5.7  -2.52543   ACTGCCGGTAAGCCA  GAGCGAACAGGCGCGCCT TGGGT AGGCCCATC-ATTCGCTC  GTCTCGCTGGCGATC  45 16
LQF05_RS10280 2240225 .. 2240240 -  -3.9  -4.07885   GACCTCGCTGCAAAA              GCGCC GATTGT AGCGC               TTCAGTTCTCGCGCA  59 27
        greB NONE
LQF05_RS10270 2238449 .. 2238463 -  -2.8  -2.93853   CTGGTTCAAGGAAAC               GGCT GCGTCAG AGCC               CTGCGTTCTTCAATC  40 18
LQF05_RS10265 2236872 .. 2236908 -  -4.9  -4.08216   CCAGCGCCTGGAAAA    GGTCCGCCCGACCCTGC AGC GCTACGCCGAGCAGATC    GAGCTGGACTGGCTG  64 502
LQF05_RS10255 NONE
LQF05_RS10250 2233344 .. 2233380 -  -6.4  -2.78816   TCATGGGGCATGAGA    CGGGGTGCTGCCTG TTTTTCGGG CAGGCCGCGCCGCG    TTGTGGTGCACGCGG  50 54
LQF05_RS10245 NONE
LQF05_RS10240 NONE
LQF05_RS10235 NONE
LQF05_RS10230 2229759 .. 2229769 -  -6.8  -3.16668   GAACATGGTCAGTAA                 CCCT CGA AGGG                 CTGGCGGGCCGTCCC  54 164
         uca 2225985 .. 2225995 -  -2.4  -3.59262   GCGTAGAGTGGGAAA                 CGGC GAA GCCT                 TTCCCACCGCGATGT  49 180
        atzF 2223834 .. 2223865 - -13.7  -2.57564   GGATGTTCCGACAAT      GCGACGGGATGGC CGCAGT GCAACCCCGTCGC       TCCTCGTCTGCCTCA  72 38
LQF05_RS10215 2222702 .. 2222727 -  -8.2  -2.79796   GCGCAGCTGATGACA         CCGTTACGGC CCGACC GCCGCCACGG          GCCAGGCAGCGCATG  53 72
LQF05_RS10210 2221296 .. 2221313 - -14.1  -2.78384   TTTTTCTCCAGCACA             GGCGGGC CGCG GCCCGCC              CGGCGTCGGCTTACT  73 36
LQF05_RS10205 NONE
LQF05_RS10200 NONE
LQF05_RS10195 NONE
LQF05_RS10190 NONE
LQF05_RS10185 NONE
LQF05_RS10180 2216387 .. 2216399 -  -3.3  -2.90615   ATGCTCCGCAAATGA                CGTGC TTC GGACG                CGATCAGGCAGGGGG  42 42
LQF05_RS10175 NONE
LQF05_RS10170 NONE
LQF05_RS10165 NONE
        glnT NONE
LQF05_RS10150 2210174 .. 2210226 - -16.3  -3.53444   TGAGGCTCCTCGAAA TGCGCGGC-GGCCACGCAGCGTGCC GGCAA GGCCCGCTGCGTGGCAAGCC-CTCA CAGGGCGCCGTCGGC  93 23
LQF05_RS10145 2209312 .. 2209326 -  -3.5    -2.567   AGCAACACTACGAAC               CGCTG GTGTT CAACG               CACGGATGGACTCGC  39 217
LQF05_RS10130 2208022 .. 2208052 -   -22  -4.54727   CCGCCCAAACGAAAA       CACCCTGCGAAAGC GTT GCCTTCGCAGGGTG       TCGGATTGCTCGCCG 100 64
        tusD NONE
        tusC NONE
        tusB NONE
LQF05_RS10105 NONE
LQF05_RS10100 2204042 .. 2204085 -  -9.1  -3.22298   GCCATCGATCAGTAA TCCCATGA-TGCCCTCCTGTT ACGG AATAGGAGGGCAGTC-TAGGA AGCATCGTTCGATCG  61 72
LQF05_RS10095 2202563 .. 2202580 -  -9.1  -3.53012   GTGCCGCTGGCCAAA             CGCGCGCC CAA GGCGCG-G             CCGGAGCCGAGCACC  66 488
LQF05_RS10065 2193317 .. 2193332 -  -3.2  -4.65895   GCTTCGAGCGAAAAA              CGGCAA TCAC TCGCCA               GCGCTACGGTTGGCG  70 159
        folE NONE
        folX NONE
LQF05_RS10050 NONE
LQF05_RS10045 2190535 .. 2190549 -  -2.7  -3.15861   CAGCAGTTTCAGCAA               GCAGG GCAGG CCGGC               ATAGATCAGCGCGAG  43 31
LQF05_RS10040 NONE
LQF05_RS10035 2189251 .. 2189270 -  -4.3  -3.07895   TCGAGGGTCAAGACA            GCATCCT AGGGCA AGAATGC             CCACTGCAGGATTGT  46 178
LQF05_RS10030 2186482 .. 2186496 -  -2.8  -3.01712   TGCCGTGCCTGAATA               CCCA CGAGGAT TGGG               TGCAGGCGCTGGTCC  42 115
LQF05_RS10015 NONE
LQF05_RS10010 2182307 .. 2182321 -  -2.7  -2.64616   TGCGTAGCCAGATCA               GCTGC GTCAT GCGGC               ACCTCCCTCGCTGCC  38 17
        phrB NONE
LQF05_RS10000 NONE
LQF05_RS09995 NONE
LQF05_RS09990 NONE
LQF05_RS09985 NONE
LQF05_RS09980 NONE
LQF05_RS09975 2174471 .. 2174512 -  -8.5  -3.28712   TCTGTTCTGCCAGAA CGCCGATCGCGTGCCGGCC TACC AGCGGGCGCTCGATCAGGG  CCAGCTGCCCTGCGT  59 351
LQF05_RS09965 2172197 .. 2172228 -   -26  -4.87318   GGCAAAACGCAAAAA      GGCGCCTGGAGCTG GGGT CAGCTCCAGGCGCC       TTTGCCTGGTTTCAA 100 335
        nirB NONE
        nirD 2169182 .. 2169197 -    -9  -3.37344   GCGGTATTCAAGGAA              CGTTGC CCGG GCAACG               GGCGGCGATCAGCCC  63 34
LQF05_RS09950 2168180 .. 2168207 - -11.9  -3.73775   TCGATCTGCACGAAA        GCCCCGGACGC CAATGC GCAACCGGGGC         TTTCGGCCGCACTCC  80 44
LQF05_RS09945 2166063 .. 2166075 - -10.5  -4.03234   GGTCGCCGAGATAAA                GGCGC AAT GCGCC                CACGTCGTCGAGCGT  78 391
LQF05_RS09935 2160752 .. 2160780 -  -8.7  -3.61398   CCCGCGCCCCAACAA        CCTGCACGGGCAG ATC CTGCGCTGGCAGG        AAGAGGGCGGTGATC  65 492
LQF05_RS09900 NONE
LQF05_RS09895 2149666 .. 2149678 -  -3.3  -2.54896   TTTGCATCGAAGGTA                GTGCG GGC CGAAC                CTTAGCATTTCCTCA  40 38
LQF05_RS09890 2148645 .. 2148684 -  -5.6  -2.62396   GAGTGGCGTAGAGCA  TGGC-GGCTGCCTGCGACA GGT CGACGCAGGCAGCCTAGGA  GCGCCGGTGCCGGCC  46 94
        fdhD NONE
LQF05_RS09880 2145123 .. 2145133 -  -2.4  -3.22091   AGGTGAATTCATTAA                 GCGG TGG CTGC                 CTGTGCGGCGACGTG  44 395
LQF05_RS09855 2139110 .. 2139142 -  -5.3  -3.70902   TCGTCTACAGCGAAA      TCGGCAGCTCACCCG TGG CCGGCGGGCTGGCGC      TGATGGCTGTCGCGG  58 135
LQF05_RS09835 2133979 .. 2134002 - -15.3   -5.7946   GTCGCAAGAAAAAAA          CAGGCCCCG AGTGGA CGGGGCCTG           TCTGGGCGGTCAGTT 100 35
LQF05_RS09830 NONE
        glgP 2130103 .. 2130125 -  -4.7  -3.29144   CCACCTGCGCCAGAA           GCTCGGCGA TGATC CCGCCGCAC           CGCGTTTCATCGTCA  49 93
LQF05_RS09790 2121764 .. 2121781 - -12.7  -2.71712   TCCCGGCGCGCAAAG             GGTGGGC TTCA GCCCACC              TTGCAGTGGTTCAGA  69 36
LQF05_RS09780 NONE
LQF05_RS09775 NONE
        mmsB NONE
LQF05_RS09765 NONE
LQF05_RS09760 2114702 .. 2114715 -  -8.1  -4.95547   CCGAGAACAATAAAA               CTGCC TTGA GGCAG                CTCCAGAACCGGTTG  93 429
LQF05_RS09675 NONE
        fabA NONE
        fabB 2087927 .. 2087955 - -21.1  -3.81741   AACCGATAACGGAAA        CAAGAACGGCGCC TAG GGCGCCGTTCTCG        TGTGTCACTTGCTGG 100 42
LQF05_RS09595 2080738 .. 2080758 - -18.3   -4.9448   ACGCAGTAAACAAAA            CGGCCCGTC ACT GACGGGCCG            TTTGCGTTTACGAAC 100 46
        gltA 2060818 .. 2060835 - -12.7  -5.38054   GGTGATAAACAAAAA             GGCTGCC CAAG GGCAGCC              TTTTTTGCGCGAGCT 100 47
LQF05_RS09505 2059974 .. 2059989 -  -3.2  -2.60496   GCGGGTTGGAAAGAG              GGGC GCCAGTAT GCCC               AAGCGTCAGGGTTGG  40 56
LQF05_RS09500 NONE
LQF05_RS09450 NONE
LQF05_RS09445 2043889 .. 2043910 -    -5  -2.71144   GAGCCGTCGCAACGA           CGTGCCGG AGACGG CCAGCTCG            GGCAGGCGGGATGGG  43 93
        coxB NONE
        ctaD NONE
LQF05_RS09425 NONE
LQF05_RS09420 2038580 .. 2038593 -  -4.5  -4.16842   TGGATTCGCAAGAAA               CTCGA CTGA CCGAG                CCTTCCCGCAGGCCG  65 61
        acnA 2034313 .. 2034340 -   -17  -3.57462   CAGTGGACGGCGAAA        CGCCGGTGCGAA CGGA TTCGCGCCGGCG         TTTTTTCTGCCTGAT 100 51
LQF05_RS09400 2032399 .. 2032431 - -12.8  -3.30159   TCAAGCCCCTGAGAA     GTGGCAGCGAGCACC TTGT GACGCTCGCTGC-AC      TGCGCTCAGCGGTTG  76 31
        ccoN NONE
        ccoO NONE
        ccoP 2028518 .. 2028556 -  -8.1  -3.61398   GTTGCCTTGGAACAA  GGCG-GGAAGGGCGGTAC GAGT GTACCGCCCTTTTACGAC   TCACTGCTTGGCGAC  64 26
        ccoN 2026785 .. 2026797 -  -3.3  -2.52464   CGTTTCCTCAAGCGA                TCTGC GCG GCAGC                GTCGTACTGGGCTGC  40 5
        ccoO NONE
LQF05_RS09365 NONE
        ccoP NONE
        ccoG NONE
LQF05_RS09350 NONE
LQF05_RS09345 2020453 .. 2020479 -  -4.3  -3.07088   ATCAGGATATACAGA        GCGGCCATCAGG ACCT CCAGA-GGCCGA         AATCAGCGTTTCGGC  46 99
        ccoS NONE
LQF05_RS09335 2019371 .. 2019413 -  -8.9  -3.04144   CGCTGACCTCGAAGA GCTGTCACCGGGCAAGCCC GATGA GGCCGCGCACGGCGTCAGC TATCGCAACATCGAC  56 157
        hemN 2017006 .. 2017022 -  -2.9  -2.99471   CGATTCGGACATAGA              GGGCTTC CTG GAAACCG              GTTTATAGCGCGCAA  41 117
         fnr NONE
LQF05_RS09315 NONE
LQF05_RS09310 2014886 .. 2014901 -  -4.6  -3.81951   GGTTACAGCAGGAAA              TCGACG CACT CGTCGC               GCAATGGAGTGTGGA  60 170
LQF05_RS09265 2005724 .. 2005755 -  -5.2    -3.524   GATGGACGCATAGAA     CGCAGCCTCTGAGC GGGTTG GCTC--AGGCCGCG      CTTCTGCGCAATGCG  52 16
LQF05_RS09235 NONE
LQF05_RS09230 1996979 .. 1996998 -  -8.5  -3.95584   CCCGCATGAACGAAA            GCCCGCC GGCGAG GGCGAGC             CGAAGCCACTCTGGC  72 419
LQF05_RS09210 NONE
LQF05_RS09205 1992879 .. 1992910 -  -9.3  -2.53876   GGCGACGGGAATCGA      CGCGCTGCTCGCC GCAGGG GACGAGCTGCGCT       TCTAGCCGTTCGCTC  56 39
LQF05_RS09195 1989264 .. 1989279 -  -8.2  -2.73875   GTGCCGTCAACATCA              GCGGCA ACCT CGCCGC               CGGCTGGCTGCTGGC  53 434
LQF05_RS09180 NONE
LQF05_RS09170 1985037 .. 1985071 - -10.7  -2.70932   GTCTTCCTTGAAGGA    TCGGGCGGACGGGCAC AGCG GTGCC-GCCCGCTCAA     GAGAGCGGGTCGGAT  61 59
LQF05_RS09165 NONE
        cobN NONE
LQF05_RS09155 NONE
LQF05_RS09150 1978314 .. 1978332 -  -2.3  -4.07568   CGCGCCTGCCGAAAA             GGCCGAG GTCAT CTCGACG             TGACGCTGATCGGCA  57 72
LQF05_RS09145 NONE
LQF05_RS09140 1976552 .. 1976568 -  -2.1  -3.01712   TTGGGTTGGGGAAGA              GCAGGGC ATC GCCATGA              TCGAGAGCCCGTGTC  41 84
        soxR 1975929 .. 1975943 - -11.4  -4.07618   GGTGGAACAAGGAAA               GCTGCC AAG GGCAGC               TTTTTTTGTGCCCGC  84 106
LQF05_RS09120 NONE
        gspD 1972781 .. 1972816 - -13.2  -2.75064   GCTCTGAGCCAATGA    TTCCTCAGCGGCAGCC GTTG GGCTTCCGCTGAGGGT     TGTCTCATCTCCCGC  73 71
LQF05_RS09040 1955093 .. 1955110 - -14.1  -3.46602   CCGCTGACAGGAGAA             GGGCGCC GCAT GGCGCCC              TTTTTCATTCAAGCA  86 42
LQF05_RS09030 1953396 .. 1953427 -  -7.3  -3.01712   CTGGTCGCTGGAAGA     CTGGCGCCGCTG-CC GTGA GGTCAGCGGGGC-AG      AGGACATCATGCTGG  54 352
LQF05_RS09010 1951564 .. 1951583 - -13.6  -5.55769   CGCCATAACAAAAAA            GGCCACTC ATTT GAGTGGCC             TTTCGAATTGGTTGC 100 34
LQF05_RS09005 1951320 .. 1951343 - -18.2  -5.10154   AGGCAAAACGAAAAA          GGGGCCACTC TTTC GAGTGGCCCC           TTTTTCTGAGGTGGT 100 37
LQF05_RS09000 1949678 .. 1949709 -  -9.4  -3.05596   GATTTCCTTATCGAA      TGGCTCGCCAG-CCG GAA CGGCCCGGCAAGCGA      GCGGATGGGCCGAAG  60 51
LQF05_RS08995 NONE
LQF05_RS08990 NONE
LQF05_RS08985 NONE
LQF05_RS08980 NONE
LQF05_RS08975 NONE
        rfaH NONE
LQF05_RS08965 NONE
LQF05_RS08960 NONE
LQF05_RS08955 1938358 .. 1938388 -  -4.6  -3.53012   GTCTCTCCTTGCAAA      GGGCGATCGC-GC GGGCCG GCAGCGCTCGCGC       GATGACTGTGACGCA  52 156
LQF05_RS08950 1937209 .. 1937232 -  -3.6  -2.66451   ACGGATGGAAATGTA          CGGGCCGGGC ATAG GCTCGGCGCT           GCTAGGGGCGGTCCG  40 27
LQF05_RS08945 1936102 .. 1936114 - -10.5  -2.89569   GGTCGAAACGAATGA                GCGGC CAG GCCGC                GATACGGAAAGCGTT  62 43
LQF05_RS08940 NONE
LQF05_RS08935 NONE
LQF05_RS08930 NONE
LQF05_RS08925 NONE
LQF05_RS08920 1932007 .. 1932027 -  -2.4   -4.1585   TTAGAACCTCGAAAA            CCGCGCAT GAAAA AGGCGCGC            GAGTATACAGAGCTG  60 71
        rimO 1930619 .. 1930650 - -18.8  -3.85698   CTGGTTGCGCAGAAA      TGAAAACGCCCCGC TAGT GCGGGGCGTTTTCC       TGTAGCGGAGCAGTT 100 40
        trpB NONE
        tsaA 1922769 .. 1922808 -   -10  -2.52464   CCGGCCGGCAAGTGA CGTCG-CGCCGCG-CCGGC GTCAG GTCGGTCGCGGCGTCG-CG GGTATCACCTCGAGC  60 4
        lexA NONE
LQF05_RS08840 1914143 .. 1914161 -    -8  -3.60792   GCCTGAAGCGCCAAA             GGCTGCCG CGA CGGCGACC             GGCTGCTACAATGGC  64 364
LQF05_RS08830 1913028 .. 1913053 -  -2.5  -3.08133   CAGCCATTGATCGAA         GCAGTCACTGTC GAG GAC-GAGACTCC         GCCGCTGACCCGCGC  42 128
LQF05_RS08800 1903356 .. 1903370 -  -4.3  -3.13403   GGGCTCCGACGAAGA               CATTC TCAAT GAATG               ACTCTTGCCGGAGCC  48 78
LQF05_RS08795 1902750 .. 1902773 -  -6.6  -3.01712   CGCGGTCCGGCAAGA          TCATGCGCCG CCTG CTGCGCAAGA           TCGCCACGGACGACT  50 230
LQF05_RS08785 1898922 .. 1898932 -  -6.8  -3.17051   TGCTGATCACCAACA                 CCAG GTT CTGG                 AACGGCCTGCCGGCA  51 439
LQF05_RS08770 NONE
LQF05_RS08765 NONE
LQF05_RS08700 NONE
LQF05_RS08695 NONE
LQF05_RS08690 1879591 .. 1879620 - -12.1  -3.01712   CCCTCGGCTCGAAGA       CGCGCCGGCTC GAAGGCAA GAGCCGGCGAG        GTGCGATCAAGGCGG  68 66
LQF05_RS08680 1877837 .. 1877853 -  -2.2  -3.29947   CATCGAGCAGATGAA             CCAGCAG ATCG CCGC-GG              CAGCCGAGCAGCAGA  44 232
LQF05_RS08645 1869931 .. 1869977 - -10.2  -2.80994   TGGAATCCGACGACA CTGGCGAGCACCGGCACG-GGGG TGGT CCGCGCCTGCC-GTGCTCGCC-G AACCAGGAAGGATCG  61 78
LQF05_RS08635 1864929 .. 1864956 -  -9.1  -3.14132   CTTGCGCTGTAGGAA        TGGGACCCGCC GCGATA GGCGACTCCCA         CTATCGCTTCTGGTG  61 26
LQF05_RS08550 1844490 .. 1844517 -  -8.4  -3.49618   TCCGTATAGAAGCAA        CCTCGCCGGTTGC ATC GCAACCGA-GTGG        CGCAGTAAACGAGCG  62 226
LQF05_RS08545 NONE
LQF05_RS08540 1841976 .. 1841998 -  -3.3  -3.40307   GCGATTCAAGAAAAG           CGATCCGAT CCATC ATCGGTGCG           ACGGAGAAGCGGCGG  47 316
LQF05_RS08465 1816004 .. 1816020 -  -2.9  -2.85668   CATGGTCAGATGACA              GGAGACA GGG TGCTTCC              AGCATGCGACAGCCT  40 50
LQF05_RS08460 NONE
LQF05_RS08455 1814627 .. 1814667 - -10.4  -3.01791   AGTGGGGCCGCAACA CCCTCCGGCCCGGCCGCG TAACCAC CGC-GCCGGACTGG-GGG ATGCGACGGGAGATG  62 360
LQF05_RS08440 1811750 .. 1811763 -  -6.7  -3.96148   GCGGGGCAGTAGAAA               CTCAC ACTT GTGAG                CGCGAGTTTGCTGGA  65 507
LQF05_RS08430 1809194 .. 1809223 -  -2.2  -3.85698   GGGTCGTCCTAGAAA      GCAGCACACGAGGT GTCG ACCT-GTA-GCCGC       GAGCATCTTGGCCTA  54 113
LQF05_RS08425 1807039 .. 1807053 -  -2.7   -4.8622   CGGCGTAACCAAAAA               GCCGG ACGAG CCCGC               AGGTTGCTGTCGAGT  72 181
LQF05_RS08400 1800361 .. 1800373 -  -3.3  -3.28712   TTGCTGGCCGCACAA                TTGCG GTT CGCGA                TGCAAAGGGTAGAAA  47 320
        phnC NONE
        phnD NONE
        phnE NONE
        ptxD NONE
LQF05_RS08375 1795696 .. 1795728 - -18.5  -3.57144   GCCCGTATCGTCAAA      GGCTGGGTGAAAGCC ATT GGCCTTGACCCAGCC      ATGTATGGCACTCAC  93 233
LQF05_RS08350 1788339 .. 1788349 -  -2.4  -3.72576   TTTCTGCCCAGGAAA                 CTGC GCG GCCG                 ACTTTGAAATCTGAG  52 205
LQF05_RS08345 1787233 .. 1787247 -  -5.6  -2.64616   TGGCCACCCACAGGA               TGACCG GTT CGGGCA               GCTCGCTGTCAGTGC  46 240
LQF05_RS08315 1782981 .. 1782998 -  -4.1  -3.33473   GACATATTAAATAGA             GGATCGC GCCG ACAATCC              AAACCCAACCGTTCC  47 118
LQF05_RS08310 1781886 .. 1781901 -  -6.2  -3.33696   GTGGCCTGTAAGCAA              GAAAAC GACC GTTTTC               TTTACGCTCTCGGCA  52 260
LQF05_RS08300 NONE
LQF05_RS08295 NONE
LQF05_RS08290 1779703 .. 1779715 -  -6.2  -3.28712   GTGCCCCCTGCAGAA                CGCC ATCGG GGCG                AGGATCAGCGCGTAT  52 288
LQF05_RS08280 NONE
LQF05_RS08275 NONE
LQF05_RS08270 1778423 .. 1778438 - -11.8  -2.79098   TTGAGCTAGTAATTA              CCGGGC CATA GCCCGG               TCTGGTGCTAGCAAG  65 56
LQF05_RS08255 1776217 .. 1776234 -  -3.3  -2.57468   GGGGAGGATACGAAC             GAAGCGC ATGT GAGCTCC              TACCTATCGAAGAAA  40 29
LQF05_RS08250 1775475 .. 1775490 -  -3.2  -2.72511   GCGAGGCTCGCAAAT              GTCCTC ATTG GAGCAC               CCACTTTCCGTTGGC  41 14
LQF05_RS08245 1774875 .. 1774892 -  -3.3  -3.41878   TCCGCCAATGCATAA             CGACATG CGAG CACGACG              CGTAGGGAGGCCCCC  49 61
LQF05_RS08240 NONE
        traD 1772148 .. 1772163 -  -4.6  -3.82202   CAGCGCGAAAGACAA              CGGAGC ATTC GCTTCG               GCCGCAAGTTCAACG  57 81
LQF05_RS08230 NONE
LQF05_RS08225 NONE
LQF05_RS08220 NONE
LQF05_RS08215 1770081 .. 1770094 -  -3.8  -2.78384   GTTGCTTTCATGAGA               TGCC TCCTTG GGCA                TTGGTTGGGTGACAC  41 55
LQF05_RS08210 NONE
LQF05_RS08205 NONE
LQF05_RS08200 NONE
LQF05_RS08195 NONE
LQF05_RS08190 NONE
LQF05_RS08185 NONE
LQF05_RS08180 1762537 .. 1762551 - -12.8  -4.46212   GTTGCGATGAGAAAA               GGGGCC TGC GGCCCC               TTCGATCAGTGCCGG 100 355
LQF05_RS08175 NONE
LQF05_RS08170 1760979 .. 1760992 -  -2.3  -3.54424   CCTCACTGTTCCAAA               GTCCG TTGT CGGAG                ATTCAATATCGTCAT  47 37
LQF05_RS08165 NONE
LQF05_RS08160 1759241 .. 1759256 -  -4.6   -3.2794   TCGTACCTAGATGAA              GCCGGC TTTA ACCAGC               TCGAACAAAACTACC  49 1
LQF05_RS08155 1757644 .. 1757671 - -12.6  -2.52519   TTAGCACAGCAACAG        GCCCGCCTCGGC CCCG GTCGAGGCGGGT         TTTTTTTGGGGGGAA  68 49
LQF05_RS08150 1757047 .. 1757062 -  -7.5  -5.64274   GCAGGCATAAAAAAA              CCGCC TGAGAG GGCGG               TTTTTCCCAAGCGTT 100 110
LQF05_RS08135 1755222 .. 1755269 - -13.5  -4.68994   ATGAGCACCTAAAAA CGGCCCATACGAAAAAGCCCGC GTCGT GCGGGCTTCTCCG-ATGGGATG TTCAGTGCTGCTTAG 100 37
LQF05_RS08130 1752829 .. 1752846 -  -6.3  -2.52464   TCCGCTTCGAACGTA             TGGTTCA CAGT CGAACCA              TCGGCCAACTTTAGA  45 231
LQF05_RS08070 1743192 .. 1743213 -  -7.9  -3.98172   ATCAACACGGATAAA           GCGCCCG-CC TAT GGTCGCGCGC           TTGCTCTGCTCAAAC  70 481
     tetR(G) 1740687 .. 1740717 -  -7.5  -3.35679   TGCTGCCACCGAGAA       GTCGCCAGTCGTC TAGCC GACGACTGGAAGC       AAGCCCGCTCCGATG  56 217
LQF05_RS08020 NONE
LQF05_RS08015 NONE
LQF05_RS08010 NONE
LQF05_RS08005 1728666 .. 1728693 -  -7.8  -2.88544   CTCTACGGGGACAGA        CCACGATTAGTCA TCC TG-CAAATCGTGG        TCTGTCCCCGGTTCG  55 61
LQF05_RS08000 1728383 .. 1728396 -  -3.1  -2.79796   CCTCATTCGAGGAGA               GAACC ATGC AGTTC                CAGTCGCTCAAGCAA  41 65
LQF05_RS07995 NONE
LQF05_RS07990 1727494 .. 1727536 -  -9.1  -3.32022   GTCGGGAGAGATCAA GCGCCCTGCTATCAATCTA TCGAT TCGATAGATTGCATGGCGC AGTGTCTCTGCTGCT  63 72
LQF05_RS07975 1723282 .. 1723293 -  -7.2  -3.28181   GAAAGTCAACCAATA                CGGC GAAC GCCG                 TTTAATTTTTGATAC  56 4
        dusA 1720895 .. 1720908 -  -3.1  -4.09108   TGGAAGTCATATAAA               GGA-GG GCT CCGTCC               TGTGAGTGGCATGAC  59 138
         tal 1719697 .. 1719715 - -14.6  -3.28712   CCTGTCGCGGCAGAA             GGTCGGCA TGT TGCCGACC             CTGGTCACCACCCAT  83 273
LQF05_RS07945 1717580 .. 1717604 -  -6.5  -2.62983   CCTATCCGCACATGA         GTCACG-TGC CTACGC GCAACGTGAC          GCGCGGCGTGGATCT  47 220
LQF05_RS07935 1716245 .. 1716273 - -13.1  -3.54543   AGCCACCTGCTCAAA        TCCAACTGCCCGG TCA CCGGCCAGCCGGA        CTGGGGCAGTGTGGT  78 321
LQF05_RS07890 1708668 .. 1708694 -   -21  -4.99134   ACCCGAAACGAAAAA         GCCCCTGACTTC TTG GAAGTCAGGGGC         TTTTCTTCGATCTGG 100 38
LQF05_RS07885 1707714 .. 1707747 -  -9.5  -3.25823   CGGCCGGGATATCAA     CCGAATCCGCGAGTC GGGT GCCTCGCAGAATCAG      ACGCAGGGCATCAAT  62 374
LQF05_RS07875 1706750 .. 1706787 -  -9.1  -3.14463   AAGGGTGCGCATGAA   TGCGGCGAAGACCAC GTTTTTCA GTGGTCCTCGCTGCG    CAGAAGTTCCCTTGT  61 86
LQF05_RS07870 1705513 .. 1705532 -  -3.4  -2.78384   TCCGTCTTCAGCATA            GGCGCTCG CGGC CGAGCGGG             CGTGGGACGCGGTGT  41 75
LQF05_RS07865 1702542 .. 1702564 - -10.5  -3.01712   CGTGGTCGCTGAAGA           CGGCAGCGG TTGGG CCGATGCCG           AGCCGCAGTACCTGC  62 489
LQF05_RS07850 1696822 .. 1696832 -  -4.6  -3.57144   GGGTGGATGCGCAAA                 GCGG GAT CCAC                 CGTACGATTCAGCAC  54 183
LQF05_RS07845 NONE
LQF05_RS07840 NONE
LQF05_RS07835 1693591 .. 1693606 - -10.4  -3.85698   CGCCCCCCGCATAAA              GGGCCA AGGA TGGCCC               TTGTAAACCGGCCCC  78 305
LQF05_RS07830 1691726 .. 1691739 -  -3.7  -4.07568   GGCGTCGTGGCAAAA               GCTCG CCAA CGTGC                CGGGGCTGGATGTGA  62 424
LQF05_RS07820 1690231 .. 1690249 -    -3  -3.09516   GTCGCGACGACCGAA             CGCCGC TTCGCTC GCGTCG             TCCGGCCGCCATACA  41 47
LQF05_RS07815 1689205 .. 1689229 -  -2.8  -4.18018   GTTGCGCATCGAAAA         GACGCTGGCCG GAGC CAGTCAG-GTC          TGGCAGGACGAGCAT  60 209
LQF05_RS07800 1685341 .. 1685363 -  -2.6  -3.33315   TGAAGATGCCGAGAA           CCCTGAACCG GTT CTGTTGAAGG           CGAGCTGGACCGTAC  44 158
LQF05_RS07795 NONE
LQF05_RS07790 1683776 .. 1683801 -  -3.9  -2.82516   GTGGGGATTACGAGA         TTCCGG-CGCTG ACG CTGCGGCCCGAA         GTGGCGCCGGGCGCT  43 167
LQF05_RS07780 1681850 .. 1681870 -  -5.3  -3.15544   GGCCAGGTTTATGAA            GTGCGCCAT GCC ATGGCGCTG            CGCCCCAGGACCTGG  47 243
LQF05_RS07765 1679241 .. 1679264 - -12.4   -3.2794   GCGGACCCAGATGAA          GCGGCGGCGCC ACA GGCGCCAC-GC          CGATTCTGGGATCAG  76 37
LQF05_RS07755 1676971 .. 1676986 -    -6  -3.53012   GCCGTGCCGCTGAAA              GCGCAG TTCC CGGCGC               TGCAACTGGTTACAC  55 261
LQF05_RS07745 1676037 .. 1676049 -  -4.1  -4.25056   GATTGCATTAAGAAA                GTCCT GCC AGAAC                TGCATGATCGCGGCA  62 120
LQF05_RS07740 1673448 .. 1673471 -  -8.1  -3.17723   CCAGTTCGAATTCAA          GCGCTGATG CTGCTC CATCGGCGC           GCCTAGCTCTGGCGC  57 28
LQF05_RS07700 1665556 .. 1665571 - -10.4  -5.27923   CAACGGCATAAAAAA              GGCTCC CGAG GGAGCC               TTTTTCGTTGCTTAC 100 37
LQF05_RS07675 1661242 .. 1661263 - -10.1  -5.75945   AGCGCGCAAAAAAAA           CCCGGATTC CTGA GAAACCGGG            CCAAGACCATTAGGA 100 196
LQF05_RS07600 1648807 .. 1648817 -  -6.8  -4.24342   CGTTTCACCAAGAAA                 CTGG GAA CCAG                 CGTCGCCGAGCGTCT  72 97
         rne 1642504 .. 1642535 - -13.2   -4.2717   AGGATTGGACGAAAA      CAAAAAAGGGATGC CGAA GCATCCCTTTTTCA       ACACCCGTGTCGTTT 100 39
LQF05_RS07535 1634376 .. 1634389 -  -2.3  -4.29325   GATGAAGATGGAAAA               GACCA TGAT CGGCC                TGCTTCTGATGCTGA  63 463
LQF05_RS07515 NONE
LQF05_RS07510 NONE
LQF05_RS07505 1629665 .. 1629675 -  -2.4  -3.54743   GATCATGAATCAGAA                 GGGC CCT GCCA                 ACAGCATCAAGTACT  47 268
         mfd NONE
LQF05_RS07445 1615187 .. 1615197 -  -6.8  -3.20349   GGCGCAAAGGCAACA                 GGCT CAT AGCC                 GTCTGAGCTCGATCA  54 18
LQF05_RS07440 1612762 .. 1612777 -  -3.2  -3.56092   CGATGATCTGGCAAA              GCGC GAAATGCT GCGC               TTGTCGGCGTCACAA  49 57
LQF05_RS07435 NONE
LQF05_RS07430 1610933 .. 1610943 -  -2.4  -2.75844   CGCGCCACGGGAAAG                 CGGC GTG GCCT                 TCGATCATGCGGTGC  39 30
LQF05_RS07425 NONE
LQF05_RS07420 NONE
        pdeM 1605472 .. 1605489 -  -7.7  -2.73221   CGAACAAGGACACCA             CGGATGA CTGG CCATCCG              GAGGGTTGTTCCTCG  53 383
LQF05_RS07405 1603582 .. 1603606 -  -9.9  -3.30124   GCTGATGCGTGACAA          GCTGGCCAGTG GCT CGCTGGCCATC          GTGCGGCACGGCGGC  64 519
LQF05_RS07365 1595687 .. 1595701 -  -3.4  -3.14132   TGCTGGTGCGATCAA               GCCCGG TCG CCGCAC               CTTCGATCATTCCAG  45 32
LQF05_RS07360 1592828 .. 1592848 - -10.3  -3.60151   GGCGCGAAAGGAGAA            GGACCGGGC AAT GCCAGGCCC            GGTCGGTCAGCCGTT  73 32
        mnmC 1590766 .. 1590788 - -14.9  -3.05384   CGCGCCTCGATGCAA           GCCGTCACC GGCAG GGTGACGGC           TTGCGCTGTCTGCTC  80 43
LQF05_RS07350 NONE
LQF05_RS07345 1588938 .. 1588948 -  -6.8   -3.4252   TTGGATTGATCATAA                 TCGC CGC GCGA                 GACTGGCGCCAATCC  58 298
LQF05_RS07335 1587528 .. 1587541 -  -3.7  -3.53444   TCAGTCGTTCCTAAA               GGTGG ATTG CCGCC                CAGCCGCTTTAGTTC  49 514
LQF05_RS07325 1586945 .. 1586958 -  -6.7   -3.9392   CGCTACCTCAAACAA               CGCTT CGAG AAGCG                GGTGATCAAGGGGCT  64 269
LQF05_RS07315 1585132 .. 1585150 - -10.2  -2.71263   AACGGCCCGGAAGCA             CCGCGCAC CCG GCGCACGG             AGCTGCAACCCGGTG  59 148
LQF05_RS07305 NONE
LQF05_RS07300 1583345 .. 1583362 - -14.1  -4.61873   CGGCAGAAATGAAAA             GGGCCGG TGAA CCGGCCC              TTCGGGGATCAGAGC 100 34
LQF05_RS07295 NONE
        dapE NONE
LQF05_RS07265 NONE
LQF05_RS07260 1575836 .. 1575862 - -12.3  -3.78934   CCGGTCGCAGAAGAA         CGAAGCCCGTC CTGAT GACGGGCTTTG         TTTTTTGAGCCTGGC  85 111
LQF05_RS07235 1571132 .. 1571153 -  -2.3  -3.02166   TCTCGAATCAAAGGA           GGAGGCTG TTGCTCG CAGC-TCC           GTTTGCAGCAAGGGC  41 57
LQF05_RS07230 NONE
      blaOXA NONE
LQF05_RS07220 NONE
LQF05_RS07215 1568280 .. 1568297 -  -4.7  -4.38712   TCCAGGTCGAGAAAA             CGGCCCG CCGG CGAGCAG              TTGAAGCGCAGCCGG  68 336
        plsB 1565442 .. 1565453 -  -7.2   -2.9176   AACTGGACGCACACA                CCGG CCAC CCGG                 AACGCCTGATGACCT  50 48
LQF05_RS07195 1564063 .. 1564116 -  -9.5  -2.64416   TATCTCGACGACAAC GATCGGCTGCAGCAGCATCAGGGCGC GCC ACGCCCCGAGGC-GCTGGAAACCATC CTGGGGCCGCGCTGA  56 146
LQF05_RS07170 NONE
LQF05_RS07165 1559432 .. 1559453 -  -7.9  -2.78384   CGCCTGGCGACGACA           CCTGCGGCC GGAT GGCGGCAGA            CAGGGTGCCTGCCGA  53 81
LQF05_RS07160 NONE
LQF05_RS07155 NONE
LQF05_RS07150 NONE
LQF05_RS07145 1555529 .. 1555557 -  -7.4  -3.70446   GGACATCGAACAGAA       CCGGCTCGAGTCC GAGT GG-CTCGAACGGG        TCGGCAGGATCGAGG  65 64
LQF05_RS07135 1554330 .. 1554364 -  -4.7  -3.24902   GAAGATCACCAGCAA     GCTCGCCGGCTGACC CCCCC GGCCGGACGGCGTCC     GCCGTCCGGCATCCC  48 42
LQF05_RS07120 1552362 .. 1552402 - -19.2  -3.61103   CAACGCGAGCTGAAA TC-GCAGCGCCATGCGG TGCGCAAG CCGCATGGCGCTGCTGA  TCAGTCGTCCCGGGT 100 26
        ccoG NONE
        mapR 1540300 .. 1540312 -  -5.5  -3.54424   TGGTATTGCTGGAAA                GCATC ATC GACGC                GGAGGACGCCCAGCG  55 246
LQF05_RS07060 NONE
LQF05_RS07045 1531792 .. 1531802 -  -2.4  -3.90744   TGCGCTGGTAAAGAA                 GGAG ATG CGCC                 TTTTCCGTCCCTTTG  55 250
LQF05_RS07005 1524116 .. 1524151 - -10.2  -2.66216   CGGCATCACGATAAG    GGGAGGGCGGGCACCG TCGG CGCTGCCCGCCCGCGG     TCGATAGTGGCGGGC  60 47
LQF05_RS07000 NONE
LQF05_RS06995 1522620 .. 1522649 - -23.7  -4.77165   GCGGGCATAAGAAAA       CGCTCCCGACGCA GCGC TGCGTCGGGAGCG        TTCGTTACGCGGGGC 100 44
LQF05_RS06935 NONE
        pxpB NONE
LQF05_RS06925 NONE
LQF05_RS06920 1506650 .. 1506670 -  -8.2  -2.53995   AGGTAGGGGAATGCA            GCCGTGCA GCGAG TGCCCGGC            AAGATTGTTGTTGTT  52 66
LQF05_RS06915 1504893 .. 1504914 -  -5.1  -4.25104   TGGCGTCTATGAAAA           CCTGCGCTTC ACG GTAGC-CAGG           CACCCCTCGGAAACC  68 494
LQF05_RS06900 1503077 .. 1503093 - -15.1  -6.11644   TGAGGCAAAAAAAAA              GCCGGGC AGG GCCCGGC              TTTCAAGGCTTCAGT 100 44
         bfr 1502401 .. 1502421 - -16.9  -4.54727   CGCTGGAAACGAAAA            CGCCCCGAT CTG ATCGGGGCG            TTTTGCTTTGCGTCG 100 53
        rdgC 1499888 .. 1499902 -  -2.1  -3.53012   CTGGTCGTGCTGAAA              CTGTCG ATAC CG-CAG               CTGTTCCTGGTCGTC  47 209
LQF05_RS06850 1493130 .. 1493140 -  -8.2  -3.61398   CCTGCCTGCCAATAA                 GGCC CGA GGCC                 ATTACCTCAACGTCA  64 27
LQF05_RS06845 1491451 .. 1491491 -  -5.4  -3.61398   TTCTGCGCGCAACAA GCTCAGCGACGGGCG TGGCAACCTGGT CGGCCG-CGCCGAGC  AGTTGAAGTCCCTCG  55 136
LQF05_RS06830 NONE
LQF05_RS06825 NONE
LQF05_RS06820 1485808 .. 1485818 -  -2.4  -3.29144   GGAGGGCGGCGAGAA                 CGCG GTG CGGG                 ACGAGACGGTGGTCT  44 212
LQF05_RS06785 NONE
LQF05_RS06780 1478595 .. 1478613 - -11.7  -3.63895   GCGAATGATGGGAAA             GGCTGGC TCGGC GCCAGCC             TTTTTTGTTTCTACG  77 36
LQF05_RS06765 1475277 .. 1475294 -  -8.3  -3.16881   CAGTCAGCTGATCAA             GGCCGCG CAGA CGCTGCC              GCAGCAGACCCTTAT  57 428
LQF05_RS06675 1459572 .. 1459596 -  -5.6  -3.14211   ACTGCTCTGGAGGAA          CCGCGCGG GCTGGCTTG CAGCGCGG          CGTATTTAACAGCAA  50 143
LQF05_RS06670 1458791 .. 1458808 - -11.3  -3.02144   GGATGCCGGCGAAGA             TGAGGCG CCGC CGCCTCA              CTATTAATTATTGCG  68 78
LQF05_RS06655 1456399 .. 1456420 - -17.3  -3.54408   GGCGACGGAAACGAA           GAGCCCGGC TTTC GCCGGGCTC            CTTTGCATCGAATGA 100 55
LQF05_RS06650 NONE
LQF05_RS06645 1453606 .. 1453640 -  -5.6  -2.53715   CCGAGCAGCAGCAAT     GCGAGCACGATACCGC GCA GCTTCATCGTGCTCAG     TTCCCGTCGCTGCCT  45 22
LQF05_RS06640 1453043 .. 1453060 -  -4.8  -3.53012   CTGGCTCGCCTGAAA             GACCAG TGAAGT CCGGTC              AGGGTTTGACGTACC  52 24
LQF05_RS06630 1451627 .. 1451637 -  -3.2  -5.25803   AACGGTGACAAAAAA                 CGTC AGT AACG                 GAAGGAATGCGCAGG  84 371
        arsC NONE
        wrbA NONE
LQF05_RS06605 1448655 .. 1448691 -  -3.5  -3.44051   TTCCGACGAGGACAA   GCTGCGG-GCGTTGCA GTTGCG CGCCTCGCGCCGCGGC    TTGAACTTGCCGGAC  49 222
        purM NONE
        purN NONE
LQF05_RS06575 NONE
LQF05_RS06570 NONE
        dapC 1440939 .. 1440963 -    -5  -2.98802   GACTAAAGTTATAGA         GGTCAGC-GAC GAGG GTCAGCTGATC          TGGGAAGAACATGCC  46 263
LQF05_RS06550 NONE
LQF05_RS06545 NONE
        dapD 1438624 .. 1438681 -  -4.1  -3.22475   GCCAGGGGGAGAACA GGGCCATAAGCGGCAAGCCTCG-TGCA ACAGGG TGCGGCAAGGCAGG-CGCTCATGGCTC GCAGCTTGCCGCTGC  45 46
LQF05_RS06535 NONE
LQF05_RS06530 1436813 .. 1436838 -  -3.9  -3.73647   GCCACCGAGGAAGAA         GCGCCGGTG ATTCTCGA CACCTACGC          CAATACCAGTTCGGC  56 208
LQF05_RS06510 1432884 .. 1432895 -  -5.8  -2.64616   TGGTCACTCAGACGA                TGCC CTAT GGCA                 AGTACAAGGGGCGCC  45 220
LQF05_RS06500 1431660 .. 1431672 -  -6.9   -5.0133   GACCTGTTGAAAAAA                GCCCG CGC CGAGC                ATCGTGTGCACAGTT  91 461
        glpD 1429652 .. 1429676 -  -4.1  -3.20164   CTACAGCGAATTCAA          CGACGTGATCG AGT CCATCGCGGCG          ATGGATGCCGACGTC  47 363
LQF05_RS06480 1426842 .. 1426854 -  -7.7  -3.07029   GAAAGAGGGTGAAGA                TGAGC GAG GCTCA                TCCTTCGCAAGTGTG  56 92
        metR 1425559 .. 1425579 -  -3.1  -2.62263   ATCCGCGGCACACCA            CCTCGGTCG GCG CCACCGCGA            CCCTACTGCGTCTGG  39 286
LQF05_RS06455 1422722 .. 1422757 -   -14  -2.66692   CACCAGCAGCAGAAG    CAGCGCGCCGGTG-CGT TTC ACGACACCGCCTCGCTG    ACGTGGGCGAGTACC  72 7
        csgE NONE
LQF05_RS06445 NONE
LQF05_RS06440 1420991 .. 1421011 -  -9.7   -5.0538   GTGGACGCGAAAAAA            CACCGCG GCAGCAG CGCGGTG            TCGGTTGCATGATCG 100 109
LQF05_RS06435 NONE
LQF05_RS06430 1418941 .. 1418956 -  -4.6  -3.64703   GGGTTTCGACCGAAA              CGGTGC AGCC GCACGG               CGGTCGGGCGATGAG  54 100
LQF05_RS06425 1417818 .. 1417830 -  -2.6  -3.17075   GCTTGTTGAAGCGAA                CGCG ACTGA CACG                GCAAGGTGCCGCCCG  43 61
LQF05_RS06420 NONE
LQF05_RS06415 1415938 .. 1415949 -  -2.2  -3.75105   GGAAGCCATCAAGAA                CGCT CCTG AGCA                 GTGGGTTCGCTCAAT  52 65
LQF05_RS06410 1415153 .. 1415171 -  -5.9  -3.28712   GCCGTCCTTCCAGAA             GGGCAGC TTCGC GCTGACC             CGCGACTACCAGAAG  51 267
LQF05_RS06400 NONE
LQF05_RS06395 1411965 .. 1411980 -  -2.4  -4.56597   CTGCCGCTGGAAAAA              GCCGTG GCCG CGCAGC               GGGTGCACCACCAGC  67 335
LQF05_RS06380 1407462 .. 1407493 -  -6.5  -3.14344   GATCTGCCGGATGAA      TGCCTGCCGCG CATTCTCGCC CGCAGCCGGCA       AGCCGAGGCGGAGCC  51 189
LQF05_RS06370 NONE
LQF05_RS06365 NONE
LQF05_RS06360 NONE
LQF05_RS06355 NONE
LQF05_RS06350 NONE
LQF05_RS06345 NONE
LQF05_RS06340 NONE
LQF05_RS06335 1397966 .. 1397986 -  -3.4  -2.57132   TGCGTGGGGTACAAC           GAGCATTTA CGGA TAAA-GCTC            TTCTGGCATTTCTTT  40 345
LQF05_RS06330 1395776 .. 1395800 -  -3.4  -3.72576   TGGTTGGCGATCAAA         GGTTGCCGGCC TAAT GGCCGCCG-CC          AGACTTCACCCCGTC  54 11
LQF05_RS06325 1394309 .. 1394338 -   -15  -3.05384   GCTGCTTTTACCGAA       GCGGCGACCG-GC TTTTC GCGCGGCCGCCGC       GCTTCATGCGCCGGT  80 40
LQF05_RS06310 1390637 .. 1390670 -  -4.4  -3.53444   TGACCCGGCTGGAAA     GCCTGCC-GGGCTAC CTGCC GCGGCCCTGACCGGC     TGCCCTCAGGCTGGC  52 31
LQF05_RS06295 1388585 .. 1388598 -  -3.8  -2.71712   GGCTTTGTCTGAAAC               GCAG ATGGCG CTGC                AGGCGGCCGTAACGC  41 64
LQF05_RS06275 1383928 .. 1383953 -  -6.7  -4.09685   TTTCATGCCGGAAAA         GCGCCTCGCCG ATCT CGACCAGGCCC          AGCTGCTCGCGACTT  68 442
LQF05_RS06260 NONE
LQF05_RS06255 1378568 .. 1378582 -  -5.6  -2.53263   TGGAGGTGGAATTCA               GCAGCG GTG CGCTGT               ATCGCTACGAGGCGG  45 181
        galE 1371403 .. 1371415 -  -5.5  -3.29461   CAATGGCGTCGACAA                CCAGC TGA ACTGG                AGTGGCGACGAGCCG  51 162
        trpB NONE
        trpA 1367716 .. 1367742 - -22.3  -5.83822   CACAGGCAAAAAAAA         CCGCCGCCCGG ATCGG CCGGGCGGCGG         TGCTTTGCAGGGCGA 100 49
LQF05_RS06200 NONE
LQF05_RS06195 NONE
LQF05_RS06190 NONE
LQF05_RS06185 NONE
LQF05_RS06180 NONE
LQF05_RS06175 NONE
LQF05_RS06170 NONE
LQF05_RS06165 1361036 .. 1361064 - -11.6  -3.44051   GCTGCAGTACCAGAA        GCAGCTGCGCCT GCAGG AGGCGCGGCGGC        TGCTGATCGCCGAGG  72 170
LQF05_RS06155 NONE
LQF05_RS06150 1357345 .. 1357355 -  -2.4  -2.84586   GTGAAAAGGGAAGTA                 GCGC AGC GCGA                 ACGGTCATGTGGCCG  40 30
LQF05_RS06145 1356372 .. 1356390 -  -4.4   -3.6053   GGCCCGACAAATCAA             TGCCCCGG CTG CCAAGGCT             GCCCCAGCGACACCG  54 3
LQF05_RS06130 1353388 .. 1353400 -  -3.3  -3.65046   TGGCCACTGCAACAA                CGCCC GAA AGGCA                CGCGCAATGGCCAAG  51 276
LQF05_RS06120 1350836 .. 1350850 -    -5  -3.33737   GAGCAAGGCCGAGAA               CAAGTA CGA TACTCG               CGGCCTGGAGGCGGC  51 448
LQF05_RS06105 1347543 .. 1347581 - -11.7   -4.2558   CATGGCCGAGGAAAA  CGGCGAGGCGGTG-GGCAG CAA CCACCACACCGCCA-GCCG  CCTAAGCGAACTGGC  88 122
LQF05_RS06095 NONE
LQF05_RS06090 1342981 .. 1343002 -  -7.1  -3.18199   CAACCTGCAACCTAA           CCGCGGCTG GCAT CTTCCGCGG            ACGTCTGCTCACGCG  54 0
LQF05_RS06075 1339027 .. 1339045 -  -6.7  -2.79183   CCGATGCCGAGGACA            TCGAGCCG GTGC CGGC-CGA             GCGGGTGCTGGCCTA  49 366
LQF05_RS06065 NONE
LQF05_RS06045 NONE
LQF05_RS06040 1334025 .. 1334035 -  -2.4  -2.78384   CGTGTGTGCAGTAGA                 CAGC AAA GCAG                 GGATGGCGGTCGGTA  39 146
LQF05_RS06035 1332191 .. 1332224 - -10.9  -2.73875   GTGTCGGCAAGACTA     CGCTGCTCAACGCCA TCGC CGGCCTCGAGCCGCG      GTTGAGCCCAGGCGT  62 521
LQF05_RS06010 NONE
LQF05_RS06005 1327527 .. 1327539 -  -4.7  -3.07013   GAGGTGGCGAAGATA                CCTGC CGC GCCGG                CTTTCGCCTACTGCC  46 53
LQF05_RS06000 NONE
LQF05_RS05995 NONE
LQF05_RS05990 NONE
LQF05_RS05985 NONE
LQF05_RS05980 1323565 .. 1323581 -  -2.1  -2.71011   AGTGGTGGCGAACCA              TGGCGTG GAG CCTGCCA              GCGTGGTGTACGCGA  38 296
LQF05_RS05970 NONE
LQF05_RS05965 NONE
        yghX 1319720 .. 1319741 -    -5  -3.65425   GGCACAGACCGGAAA           GCGGCGAC GAAAAG GCCGTCGC            AGTCAGTTCAGATGG  54 28
LQF05_RS05955 1318747 .. 1318775 - -12.5  -2.71712   CCCTCGCGCGCAAAC       GCTCTGCTGCGC CTATGC GCGCAGC-GAGC        TAGCCGATCCGCTGC  69 25
LQF05_RS05940 NONE
LQF05_RS05935 NONE
LQF05_RS05930 NONE
LQF05_RS05925 1311568 .. 1311579 -  -2.2  -3.62775   AGCATGTCTGAACAA                CCCT GAGC AGAG                 TGGCGATCGGGCCCG  49 61
LQF05_RS05920 1310512 .. 1310526 -  -3.4  -3.85698   TGCTGCTCGGAGAAA               GCATCG CTG CGTCGC               AATGGCTGACCTATG  56 217
LQF05_RS05880 1295506 .. 1295536 - -21.3  -2.87344   CAGGCGCGGTAGAGA       TGAAGAGGGCGCC GCTCG GGCGCCCTCTTCA       TTTGCCGTCGCCAAC 100 62
        pulA 1291749 .. 1291761 -  -6.2  -4.09963   GCCGAAGAAGAAGAA                GGGC AAGAA GCCC                TCGAAGAAACGCTGA  65 479
        rapA 1287376 .. 1287409 -  -2.1  -3.53811   CGGACGCGCTGGAAA     GCCGCGCCGATCAGC TCAA GCAGGTCGCCGATGC      CCTGGGCGATGACCA  47 318
LQF05_RS05825 1280941 .. 1280973 - -21.9  -3.54741   GACGATCCGGCCAAA      CGCCGCGGCAAGCGC TCA GCGCGAGCCGCGGCG      TGATCACTCAGACGC 100 33
LQF05_RS05815 NONE
LQF05_RS05810 NONE
LQF05_RS05805 NONE
        phnE 1277146 .. 1277170 -  -6.9  -3.64703   GGCGCTGCACTGAAA          CGGGGCGGGCG TGA CGCTGGCGCCG          CCCTCAGCCTCTCAC  60 29
LQF05_RS05790 1275465 .. 1275492 - -14.3  -4.07568   GGCCGCCCGCTAAAA        CAAAGCCCACA AGCGAG TGTGGGCTTTG         CCAGGCTGATGAAAG  95 41
        livH NONE
LQF05_RS05780 NONE
        livG 1272306 .. 1272317 -  -2.2  -2.64155   CGTTTTCGAAAGTCA                GCAT GCTC ACGC                 CTCCCCCAGATAGGC  38 20
LQF05_RS05770 1271566 .. 1271586 - -12.5   -5.0925   CCGGAAAACGAAAAA            GCCCCGCCA GGA CGGCAGGGC            TTTCGTCGACCATGG 100 47
LQF05_RS05765 NONE
LQF05_RS05760 NONE
LQF05_RS05755 1269412 .. 1269434 - -14.9  -3.96624   TACCGCCAGCACAAA           GAGGCCGCT CAATT AGCGGCCTC           TTCGTCCAGGCATAA  93 294
LQF05_RS05665 1249959 .. 1249970 -  -5.8  -2.78547   GCATCTGACGAATGA                GCTG GGAT CAGC                 CGCAGGCGTTCATCA  46 470
LQF05_RS05625 1243921 .. 1243938 -  -5.5  -3.53811   CCTACTGTTTGGAAA             GGAGAAG TCAA CCCCTCC              AGCAGTGCGCCGGGG  55 79
LQF05_RS05620 1243788 .. 1243805 -  -8.4  -5.60689   GCAGACAATAAAAAA             CCCAGC GCGCTG GCTGGG              TTCTTGAATTTGGCT 100 36
        argF NONE
LQF05_RS05600 1240068 .. 1240087 -    -5  -3.73224   GCAGTCGTGAGGAAA            CCGCTGATC ATC GATC-GCAG            CCAGGACGAGCGGTT  58 476
        xseA 1233113 .. 1233145 -  -8.5  -2.91735   CGAAGACGCGAGACA     TGGATGGGTCCGTT GCAGGA AACGG-CCCATCCT      CGCGTAAACCTCCGG  55 87
LQF05_RS05565 NONE
LQF05_RS05560 1231668 .. 1231709 - -10.7  -2.72471   TCTCCATCACATAAT GTCGGGC-GCGACCTCAGCA ACG CACGGTGGTCGCGGCCCGTC GGTTCGCAGCGTCCG  61 43
LQF05_RS05555 1230198 .. 1230220 - -11.3  -3.64162   ACTAACGACGGTAAA          GGAGCG-GGG CGTT CCCTCGCTCC           GGACGTAGGTTGGCG  77 151
        leuA 1225513 .. 1225537 - -21.5  -4.77165   GCTGCCATAAGAAAA          CGGGCGCCATC GAG GATGGCGCCCG          TCGTCACGTCAGAAC 100 54
LQF05_RS05530 1224227 .. 1224256 - -14.9  -3.25479   GCATGAAAGAGGGAA       GGGCTGGCGCGCC TGCG GGCTCGCCAGCCG        AACGATCAGGCCGCC  82 31
LQF05_RS05525 NONE
LQF05_RS05520 1222438 .. 1222477 -  -4.8   -2.7185   AGCATGGCCCAACCA  GCCGGCAGCATGCAGC GGCGCCGG GCGGCGTGCAACCGAC   GCCGGTTAACCCTGG  43 31
LQF05_RS05515 1221781 .. 1221801 -  -5.4  -2.69799   CGATCCGATAGAGCA           TGGCGTCAG CCCG CCG-CGCCA            GTACGCTGCAGATGC  46 10
LQF05_RS05510 NONE
LQF05_RS05505 NONE
LQF05_RS05500 1218646 .. 1218670 -  -4.1  -2.88231   AGCACAAGCACTACA          CGCCAGGCCTG CAA CAGGCCTTGTT          CGAGGTGAACGGCTG  43 407
        cysE 1215794 .. 1215837 - -10.2  -3.04144   CGCCGATGGTCAACA GCCGGCG-CATCAAGTTGCGC TAT GCGCACCTGGGTGGCGCCAAC CCGCCGCTGATCGTC  62 359
        suhB 1198497 .. 1198512 - -11.8  -5.61596   AGCTGCATAAAAAAA              CGCCCC TGTT GGGGCG               TTTTTCTTTGCGTCA 100 44
LQF05_RS05350 1191891 .. 1191902 -  -4.4  -3.70033   AACTCAAAAGTAGAA                TTGC CCCC GCAA                 AGCAGGAAGCTGGAA  54 379
LQF05_RS05345 1191607 .. 1191630 - -16.8  -5.24129   TGCGCGCATAAAAAA          GCCCCTGATG TTGC CATCAGGGGC           TTTTCGGAGAGAAGG 100 42
LQF05_RS05340 1190693 .. 1190708 -  -6.1  -3.62224   ACAGGGGCTGAACAA              CAGCC GCTACT GGCTG               GCGTTCTGGACCAAG  57 369
LQF05_RS05325 NONE
LQF05_RS05320 NONE
LQF05_RS05315 1186058 .. 1186079 - -17.3  -3.90889   AAGTATAAAGGCAAA           CGGCCGCGA GATT TCGCGGCCG            TGCGGATTAACTACG 100 51
LQF05_RS05310 1183124 .. 1183146 - -11.3  -4.93365   CGCCATAAGCAAAAA          GGCCAGCACC TTTC GG-GCTGGCC           TTTCTGTTTTGCCGG 100 48
        nhaD 1181379 .. 1181423 -  -7.9  -3.06183   CTGACGGTCATGGAA GGTCCCTGGCCAGGTCGTCTGT GGGG ACTG-CGACCTGGCC-GGG-CT AGCTACGTTCAGCGC  56 34
LQF05_RS05300 1181060 .. 1181079 -  -5.7  -2.87243   CGAGGACCAGAAGCA            GATCGCC GTTCAT GGCAATC             AGGGGTAATCGAGGA  48 24
LQF05_RS05295 NONE
LQF05_RS05290 1177966 .. 1177993 -  -5.4  -3.29511   CGCATTGTCCCACAA        CCGCCTCGGC TGGCTAGT GCCGGCGCGG         CACCATCAGCATCCA  52 11
        rlmF 1176879 .. 1176890 -  -5.8  -3.53091   ACGCTGGCGCTCAAA                GACC GCCA GGTC                 TGGGACATTGTCGTT  55 73
        yejK NONE
LQF05_RS05255 NONE
LQF05_RS05250 1171155 .. 1171165 -  -2.4  -3.05844   CGCCGGAGCGGAAGA                 GCTG ATC CTGC                 GCCGCAGCGACGATC  42 103
        mltF 1167813 .. 1167844 - -14.4  -2.52464   TGGCCTTCGAACCGA      CCGAGGCGGACG-TG ATG CAGCGCCCGCCGCGG      CGACCGGACGAACCG  70 482
LQF05_RS05225 NONE
LQF05_RS05220 1162979 .. 1162994 -  -4.6  -3.43042   CTGGTTAGCAAAAAG              CTGACC AACT GGACAG               ATACCTTCGTTGTGC  52 147
LQF05_RS05215 NONE
LQF05_RS05210 1160702 .. 1160717 -  -4.6  -3.92625   CATACTGCAATTAAA              GCCCGT TCAG ACGGGT               TCGGCCTCGCCCTGC  59 16
        xdhA NONE
        xdhB 1156687 .. 1156707 -  -3.2  -3.31322   GCTAACGGTGGACAA            GCAAAGCG TTGTC CACCCTGC            GTCAGGCCGGGGTGG  47 27
        xdhC NONE
        guaD 1153990 .. 1154009 -  -6.4  -3.61398   CGCGCTGCTGAAGAA            GGCCGATA CCCG TATCGGCA             GCCTGCCGGCCAGCC  59 372
LQF05_RS05165 1149209 .. 1149229 - -16.1  -5.42514   TGAGAAATGAAAAAA            CCCCGCCGC AAT GCGACGGGG            CGGTGAGGCGCGCCT 100 44
LQF05_RS05160 1148406 .. 1148417 -  -7.2  -3.21772   AAGCGCGTGACAAGA                GCCG TCTG CGGC                 ACCTGCGTCGGGTGG  54 165
        puuE NONE
        uraD NONE
         alc NONE
LQF05_RS05135 NONE
LQF05_RS05130 1143206 .. 1143226 - -18.3   -4.1822   CGTCATTGCAAGAAA            GCCGCACGC CTG GCGTGCGGC            TGGGGGCGGGCTCAG 100 37
LQF05_RS05125 1141725 .. 1141745 -  -9.6  -2.62515   AACGGGCGGAGAGGA            GGGCGGCC GGTAT GGCCGCCG            CGTCGGTTCAGGCGT  56 33
LQF05_RS05120 1140048 .. 1140067 -  -5.6   -2.5294   CATTGTGTACAAGAT            GACGGATG GTCG CGCCCGTC             TCAGCGGTCGGGTTG  45 26
LQF05_RS05115 NONE
LQF05_RS05110 1137420 .. 1137439 - -16.4  -4.54727   CCGCCGAAATGAAAA            GGGGCGCC TCTC GGCGCCCC             TTTTTTCTGCCCGAC 100 44
LQF05_RS05100 NONE
LQF05_RS05095 NONE
LQF05_RS05090 NONE
LQF05_RS05085 1130322 .. 1130339 - -12.7  -3.72576   CCCGTCTGCACGAAA             CGCCAGC ACTT GCTGGCG              TTTTTTATGCCCGCA  85 42
LQF05_RS05055 NONE
        uraH 1124073 .. 1124127 -  -3.5  -2.71364   CGACTGGGTCAAGCA GGGCCTGGGCATCGG-CTGGCGCTC GACCTGG GAGATCCAGGCCGA-GCTCAAGCGC GGCGAGCTGGTCACG  40 187
         gcl 1121440 .. 1121453 -  -3.1  -3.09516   GTTCGTAGGATGGAA               GACCGC GAA GCG-TC               TTCCACGCGTCTGGT  43 51
         hyi NONE
LQF05_RS05030 1119263 .. 1119306 - -17.6  -2.52676   GAGGTCTGCAACCGA TTCCAGACCTTAGGGCTCGC CAAT GCAAGCGCTAAGGTCTGCAA TTGAAATCGACCCGC  83 279
LQF05_RS05025 NONE
         pyk NONE
LQF05_RS05015 1115078 .. 1115093 -  -5.4  -4.56597   CTCTGGGGGGAAAAA              CCGACGG TCG CCGT-GG              CGAACGTCATGCAGA  74 478
        hmpA 1113833 .. 1113845 -  -3.3  -3.10012   AACGGCATGACTGAA                TCTCC TCT GGAGG                AGGCTCGCGTGGCGC  43 55
LQF05_RS05000 1113393 .. 1113418 -  -3.2  -2.92951   GACACTTTCACAAAC         GGCTGAAAGA GAGAGA TCAATCAGCC          TTCACTGTCTCAGAG  42 175
LQF05_RS04995 1113132 .. 1113163 - -17.4  -5.40072   CCTTTGTTAAAAAAA      GAAAAGGCAGGTGC CGAA GCGCCTGCCTTTTC       TTGTTTTGCCGTAGC 100 46
        pncB 1111185 .. 1111231 -  -6.4  -3.16039   AACTACGGGCATGAA GCCGGCGACCAGGTGCTGCGC TGCGCG GCGCGGCGTCTGGT-GACGAC CCTGCGCGCGTCCGA  51 373
LQF05_RS04980 1107647 .. 1107666 -  -9.2  -2.83164   CCACCGAGCAGCAGA            GCCTGGCC GGCC GGCAAGGC             AATCAGGATCAGCGC  58 491
LQF05_RS04970 1106335 .. 1106345 -  -2.4  -3.14132   TGCGCCTGTTACGAA                 GCGG GCT CGGC                 TGGGGCCTGGCACCG  42 222
LQF05_RS04960 1104906 .. 1104942 -  -3.6   -5.0538   GGTCAGTGCAAAAAA   TGGACGTGGCAGGGCGC CGCA GCGTACCGCCA-GTTCA    GCCGGCGAATGCGAG  80 23
LQF05_RS04955 1103910 .. 1103929 - -11.4  -4.55128   AGCCTTAAATGAAAA            TGCCCGCA TGAG CGCGGGCA             TTTTGATTCACTGCT  95 52
LQF05_RS04950 1101534 .. 1101551 -    -4  -2.57931   GCGATGGGCCAGAAG             GGCGCC GAGTGT GGCGCA              AGTCGCTGGCGCTGG  40 79
LQF05_RS04945 1100393 .. 1100415 -  -7.7  -3.12327   CCGCTATACCGAAGA          GCGGCTGCAC GAAG GCG-AGCCGC           TTTACGCCATCGGCG  55 426
LQF05_RS04930 1097802 .. 1097832 - -18.3  -2.52464   TGTTCGCCGAACGGA       GACACGGGCGCCA GTGCG CGGCGCCCGTGCC       GCTTCCGATCAGAAT  85 34
LQF05_RS04925 1096235 .. 1096246 -  -4.4  -2.71712   CTCGCGCCGGGAAAG                CATG GATA CATG                 GGTTCACTCAGAGCG  43 33
LQF05_RS04920 NONE
LQF05_RS04915 NONE
LQF05_RS04910 1092265 .. 1092300 - -15.4  -3.65351   GCAGGGCCACCGAAA    GGCGGGGCGG-GCGACA GGC TGTCGGGCCGCCCCGCT    GATCGTCAGCCAGCG  93 31
LQF05_RS04905 NONE
LQF05_RS04900 1087476 .. 1087498 -  -9.1  -4.82901   TTGGCTCCATAAAAA           GAACCCCGC CTCGT GCGGGGTTT           TTTTTGCGTGCCGTT 100 366
LQF05_RS04870 1083024 .. 1083041 - -12.7  -4.14627   CGTCTATAGAAAGAA             GGCAGCC CGAT GGCTGCC              TTTTTGTTTGCAGGT  95 45
LQF05_RS04860 NONE
LQF05_RS04855 1079721 .. 1079746 - -14.7  -3.51232   CCCTTTGCAAACGAA         GCGAAGCCGGC ATCT GCCGGCTTCGT          CGTTTTCAGCTGCGC  90 31
LQF05_RS04840 NONE
LQF05_RS04835 NONE
LQF05_RS04830 NONE
LQF05_RS04825 NONE
LQF05_RS04820 1072527 .. 1072555 - -15.3  -2.64099   CGCCTCGACGAGAAG        TCGCCGATCGGCT TCA AGCCGGTCGACGA        GGGCGAGGCGGGCGG  76 60
LQF05_RS04775 NONE
LQF05_RS04770 1060917 .. 1060927 -  -2.4   -3.4678   ATTTGTACAGGATAA                 GCGG GCG CGGC                 GAAGATTGGTAGCGT  47 50
LQF05_RS04765 NONE
LQF05_RS04760 1060093 .. 1060126 - -18.3  -3.02144   TGATGCCGGGGAACA     CCGTTGCGCCTGG-GT CAG ACGCCAGGCGCAACGA     TACGCTGCGGATACG  89 130
         upp NONE
LQF05_RS04730 1050641 .. 1050652 -  -7.2  -3.55761   GACTCAGGCGGGAAA                GGGG GCGG CCCC                 AGCGGACGCTGGGGC  58 49
LQF05_RS04725 1050180 .. 1050192 -  -6.2  -3.71848   CGCGGGCATCAAGAA                GCCG AACGA CGGC                ATCGAGAGCTACGCC  60 126
LQF05_RS04690 NONE
        lolB NONE
        ispE NONE
LQF05_RS04675 NONE
LQF05_RS04670 1041184 .. 1041212 - -12.6   -5.1356   TCCGATGAATAAAAA        GCTGTTCAAAAG GCGAG CTCTTGAACAGC        TTCAAGTGTATGGCA 100 36
LQF05_RS04665 1040150 .. 1040168 - -13.1  -4.56597   GCTGTTGGGCAAAAA             GCCCCGC GCGAG GCGGGGC             ACATTACGTTCAGTG 100 60
LQF05_RS04660 NONE
         pth NONE
        ychF 1037681 .. 1037700 -   -15  -4.55128   AGGCGGAAACGAAAA            GGCCCCGA CGAG TCGGGGCC             TTCAGGCGAGCGTCG 100 48
LQF05_RS04595 NONE
LQF05_RS04590 NONE
LQF05_RS04585 NONE
LQF05_RS04580 1021210 .. 1021268 -  -5.3  -3.05046   CTACCGGTGGAAAAG CCTGCGGCGTTTTCCACCCTACGGCC TTGCGTTC GTGCATAGGGTGGACAACGGCG-AAG CCTTGTCCACCTTGT  49 48
LQF05_RS04575 1020221 .. 1020235 -  -2.8  -3.72027   AGGGTTTAGCAAGAA               CGGT GCCGCTA ACCG               GCCAGTCTGGCGCGG  52 19
LQF05_RS04570 NONE
LQF05_RS04565 1018577 .. 1018598 - -12.3  -5.45652   ACTCCGAATAAAAAA           GCGCTACGC CGGG GCGTAACGC            GAGGACCAGGCACAC 100 241
LQF05_RS04560 NONE
LQF05_RS04555 1016848 .. 1016875 - -17.8   -3.6053   TGGCGGACAAACGAA        TCCGGCGT-GCGC AGG GCGCAACGCCGGA        TGAGAGGCAGGCGAG 100 53
LQF05_RS04550 1015372 .. 1015395 - -13.8  -2.65815   GGCACAGGGATAGGA          GGCGGGCACG TCGC CGTGCCCGCG           GGCTGCAGCGCAGCC  72 42
LQF05_RS04545 NONE
LQF05_RS04540 NONE
LQF05_RS04535 NONE
LQF05_RS04530 1011100 .. 1011133 -  -3.1  -3.37522   AGCGGACGGAAGGAA     GGAAGAGCAGGCGA TGGCCGG TCGCC-GCGCTTGC     GGCGAAGGCTCTGGC  47 155
LQF05_RS04525 1009106 .. 1009120 -  -4.2  -2.71364   CCAGTGGCGGAAGTA               GCCG GGCTGTT CGGC               TGGATGGCGCGTGCC  43 201
LQF05_RS04520 1007707 .. 1007725 - -13.1   -5.0133   CATGCCCGGAAAAAA             GCCGGGC GCGGG GCCCGGC             GAAGTCCAACGAGGA 100 61
LQF05_RS04475 1001509 .. 1001529 -  -3.9  -3.34013   TACGGCTTCAACGAA            GTGGGCC GCCGCCG GGCCTAC            TATCCGTCGGCCGAT  49 187
        mksB NONE
        mksE NONE
        mksF  990942 ..  990957 - -11.8  -4.84527   CGCACATATGAAAAA              GGGCCC CATG GGGCCC               TTTTTCGTTGCGGGA 100 43
LQF05_RS04360 NONE
LQF05_RS04340  969254 ..  969284 - -21.9  -2.94416   TACCGGGAGTATAGA       GGCACCGCCGCGG CCTGC CCGCGACGGTGCC       TAACGGTCAAAGCCC 100 32
LQF05_RS04335 NONE
LQF05_RS04330 NONE
LQF05_RS04325  967063 ..  967081 -   -16  -5.51402   AGACAGGCAAAAAAA             GACCCGGC AGA GCCGGGTC             AAAACCGTGATTAGC 100 188
LQF05_RS04305  963832 ..  963853 -  -4.3  -3.14468   CGGCATGATACCCAA           GCCCGGA-GC TTG GCGCCCGTGC           TCAACTGTCGCTCTG  48 26
LQF05_RS04300  962004 ..  962018 -  -4.2  -3.87075   AGTATCTGCGACAAA               GCGC GGGGATT GCGC               TCCGTACCTAGCGCA  59 33
        aroQ  961323 ..  961336 -  -2.3   -3.6715   CCAGGTAAGTTCAAA               GGGCA TTGC TGCTC                GCTTCTTCAAGGCTC  49 60
        accB NONE
        accC  959423 ..  959454 - -16.6  -3.85698   GGTGGCGCGCAGAAA      CGACAAGGGCCGCC CGAA GGCAGCCCCTGTCA       TGCCGAGCCGAGGCT 100 40
        prmA  958441 ..  958457 -    -5  -2.62184   TGCCGCTGCACATCA              GCTGCG ACGAA CGCCGC              TGATGCGTACCCAGC  43 6
LQF05_RS04275  956958 ..  956975 -  -3.3  -3.21395   AGGGTGGGCATAATA             CCCGCTA CGCA TGACGGG              TTAAAGGCTGTTTTG  45 140
        dusB NONE
         fis NONE
        purH  953698 ..  953716 -    -8  -2.52464   CTCTCTCCCAATGGA             GGCGGGCC GGT AGCCCGCT             TGGTGGATAAGCAAA  52 189
        purD  952309 ..  952325 -  -2.2  -2.78816   TGACGGCGGATTATA             GCCATGC CGCA GC-CGGC              CTGTAATGCGTGCGA  39 88
LQF05_RS04250  949157 ..  949167 -  -6.8  -3.14132   CCTCTGGGGCACCAA                 TCGC GAG GCGA                 GTCGCTGGCCTGACC  51 328
LQF05_RS04240 NONE
LQF05_RS04235  946168 ..  946195 -   -14  -4.56775   ACGGGGCTTTAAAAA        GGGCTGCTCGGC GCGT GCCGGGCGGCCC         TTTTTTCGTTTTACT 100 36
        dksA  941234 ..  941255 - -12.9  -3.51232   GGGCCTGGAAATGAA           GCGGGGCGC CGTA GCGCCCCGT            TCGAGATCAGGAACC  79 32
      gluQRS  940201 ..  940219 -  -4.4  -2.63596   GGCGATGGTAGAGCA             GCGGCACG CGG CAAGCCAC             CAGCGGCAGGCAAAA  43 73
LQF05_RS04200 NONE
LQF05_RS04195  937016 ..  937030 -  -8.5  -3.35679   GGTCTGGAGGCAGAA               CCGGC GCCGG GCCGG               TACGGCAGTCGCCTC  59 42
LQF05_RS04190  935509 ..  935535 - -10.1   -5.5074   GAAGGCAAGAAAAAA        CCGGG-GCGTCG TTAC CGATGCTCCCGG         TTTTTGTTACGAACG 100 60
LQF05_RS04185 NONE
        folK NONE
        panB NONE
        panC NONE
LQF05_RS04165  930617 ..  930641 - -16.5  -4.86621   AGCCCCAACGAAAAA          GCCCGAAGTGC GGA ACACTTCGGGC          TTGGATTCAATGCAG 100 55
         pgi  928613 ..  928645 - -17.7  -3.07113   GAGCACGCGACGGAA      GGGGACCGGACGCTG CGG CAGCGTCCGGTCAGC      AGGTGCGTTCAACCG  89 34
LQF05_RS04155  927645 ..  927655 -  -6.8  -2.57211   ATGCGGCGCGACAAC                 CGCT GCT AGCG                 TGGTGGCAGGCCCAT  49 20
LQF05_RS04150 NONE
LQF05_RS04145 NONE
LQF05_RS04140 NONE
LQF05_RS04135  922950 ..  922966 - -15.1  -3.73068   CCGCGAATCGAAGAA              CCCCGCC ATT GGCGGGG              TTTTTTACGTTAGCC  93 35
LQF05_RS04055  906832 ..  906857 -  -9.7  -2.81547   GGGCGAGAGCAATGA         CTGACGGCGGCA GAC TGCTGCCG-CAG         CGGTTTCACGCCTGG  57 31
        recN  894686 ..  894702 - -15.1   -4.1413   AATAGATGTTGAAAA              GGCGGCC ATG GGCCGCC              TTTTTTATGCCGCTC  95 51
LQF05_RS04000  893629 ..  893647 - -13.1  -4.39166   CGCTAGATAGCAAAA             CGCCCGG ACTCG CCGGGCG             TTTTTTCATTCGGTT 100 31
        smpB  892064 ..  892079 -  -5.4  -3.22223   GAAGGCCAGCAGGAA              GC-CCAG CGG CTGGCGC              GCGCGCAGCGCCGGC  49 128
LQF05_RS03975  889337 ..  889359 - -20.6  -3.17075   GTTTCTGGAATGCAA           CCGTGCCCCC AGC GGGGGCACGG           TCTGTTTCTGTCGTT  95 40
LQF05_RS03970 NONE
LQF05_RS03965 NONE
LQF05_RS03960 NONE
LQF05_RS03955  883278 ..  883325 -   -22  -2.54896   CGTTCATCGAAGCGA CACAAACGAAACGGCCCCGCTC CGCT GAGCGGGGCCGTAACGCTGGTG CTAGAGCGGTTGGTC 100 26
LQF05_RS03950  882794 ..  882841 -    -9   -3.1733   CTGGTTAGAAAATGA TCAGCTGCAGCGGCAGGATCGC AGGT ACGATCCCGCCGCCTTGGCTCA GTTGCCGCCGCCCGA  61 23
        ssrA  882299 ..  882314 -    -9  -5.64274   TCAGGCACAAAAAAA              GACGTC CGTG GACGTC               TTTAGATGTTGTAAT 100 40
LQF05_RS03940  880544 ..  880556 -  -5.5  -3.44051   TGCGGACCAGCACAA                GACGG TCG CCATC                CAGCTATCTAGCAGC  55 357
LQF05_RS03920  877133 ..  877153 - -12.5  -3.87869   GCAAGCCGGCATAAA            GCGCCGCGC AGA GCGCAGCAC            CGGCTGGAGGTTTCA  86 68
LQF05_RS03915  876077 ..  876105 - -10.2  -5.03994   TTGCAGACATAAAAA        TGCCCAGCCAGC GCGAG GCTGACCGGGCG        ATACGGTTGAGATAG 100 50
LQF05_RS03910  874981 ..  875015 -  -9.3  -5.46698   CTGAAAATGAAAAAA    GGCCATC-CACGCAGC GCGA ACTGCATGGGCTGGCC     AAGGGGAGGGAGTTA 100 57
LQF05_RS03905 NONE
        radC NONE
LQF05_RS03895  873315 ..  873328 -  -8.1  -2.71364   TGATTTGTTTAAGGA               GAGCC ACGC GGCTC                TCCTTGAACATCAGC  53 44
LQF05_RS03890  872856 ..  872868 -  -3.3  -3.50853   CTCGGTTAAGGAGAA                CTGCA ACG TGCTG                AAGGTGAATACCTAC  49 90
LQF05_RS03850 NONE
LQF05_RS03845  856504 ..  856514 -  -3.2  -3.04144   GCTTCATCGTGAACA                 GCCT GTC AGAC                 TGCTTCTGCCGGAGT  43 59
LQF05_RS03825  850630 ..  850657 -  -9.8  -5.38054   CGCCACAAAGAAAAA        GCCCCGAGAGTC TTGA GATTCTCGGGGG         CTTTGTTTGTTTGGT 100 222
LQF05_RS03815  849032 ..  849054 -  -9.8  -3.05384   GGGTTCCTGATGGAA           GCGCAACGCT TGG AGCGCTGGGC           GTGCCGCAGCATAAC  64 147
LQF05_RS03810  846748 ..  846791 -  -8.8  -2.55015   AGGGGAGCGAACCGA CCCTCGCACCCGTG-GCGCC TGCCCG GGCGCTCACGG-CGCGGCGG GAGGCGCGGGCGTAT  56 12
LQF05_RS03790  842208 ..  842235 -    -4  -3.25223   TACCGAGACGACCAA        CCCCTGCGCC GAACAGCG GGCGCAGCTG         CAGCGTACCGTTGCG  47 187
LQF05_RS03760 NONE
LQF05_RS03755  831299 ..  831319 -  -9.6  -2.57132   GGTGGCGGTGACAAT            GGCGGCGG TGAGC CCGGCGCC            CTGGTCAGCGTGAAC  55 497
LQF05_RS03745  828180 ..  828205 - -14.1  -5.24129   TCTCCGGATAAAAAA         TGCCCCGAC-CT GCC AGAGTCGGGGCA         AAAGGCACCGTCTGG 100 95
LQF05_RS03740  827050 ..  827064 -  -8.5  -3.53444   TCATCTTCGGCGAAA               GCGCC TCGCC GGCGC               GGTTGCTGAGCGCGG  62 196
LQF05_RS03705 NONE
LQF05_RS03680 NONE
LQF05_RS03675  813841 ..  813856 -  -5.4  -3.24747   GCGCCAGACGATGAA              CATGGA TTGG CCCATG               GGGTTCTCCTCGGAA  50 44
LQF05_RS03670 NONE
LQF05_RS03665  811313 ..  811329 -  -4.4  -3.21099   GGTGTCGAGCATGAA             TGC-CGG ACCA CCGTGCA              CTGGCAGCTGTTCGA  47 324
LQF05_RS03645 NONE
LQF05_RS03640  807001 ..  807023 -  -5.5  -3.71848   CCTGGCGATCAAGAA           CCTGATCGA CAGCC TCGACCCGG           ACACCCTGCCGAGCT  60 254
        ytfE NONE
LQF05_RS03605  801227 ..  801238 -  -2.2  -3.73068   GTTTCAATTGAACAA                CAAC AAAC GTCG                 GGCTTCAGCCTAGCG  52 121
LQF05_RS03600  800519 ..  800533 -  -6.4  -2.56715   ATGGCGATCAACTCA               CTCGAA CTG CTCGAG               CCGCTGACGATCGAG  49 8
LQF05_RS03595  799981 ..  799995 -  -7.8  -2.58544   CCGCAGTTGTACAAG               CAGCTG ACC CAGCCG               TAGGCGGGCAATGGC  52 287
LQF05_RS03535 NONE
LQF05_RS03530 NONE
LQF05_RS03525  788396 ..  788423 -  -4.7  -5.00196   TCGGAAACAATAAAA        GTCGCG-CGGCC TTGGT GCCCGGCGCGGC        CGGGCCGGGCCGTCG  81 42
        nirJ NONE
        cobA NONE
LQF05_RS03510  784667 ..  784694 - -18.4  -2.78384   GGCTTGCGGATGATA        GGTCGCCCGCTG TTGT CTGCGGGCGACC         GGAAGGTGCTAATGC  86 34
LQF05_RS03505  783232 ..  783252 -  -3.1    -3.737   GAACGGCTGATCAAA            CAGACCGAG AAG CACGCCCTG            CGGCGCAGCATGGGC  54 515
LQF05_RS03425  766869 ..  766882 -  -8.1  -3.62597   CTCACGCCGGAAGAA               CGCCA GGCC TGGCG                CGAGCAGATGCTGCC  63 100
LQF05_RS03410  763234 ..  763248 -  -5.6  -3.29511   GCGAGGCTTGTATAA               GCCTAG ACC CTCGGC               CGCCCGTCAAGGTTG  52 32
LQF05_RS03405  761729 ..  761747 -  -4.5  -3.49182   AGACAGCAGAACGAA             GCAGGGA GTCCA TCGCTGC             CGAGCAGTGCTGCCG  52 107
LQF05_RS03400  757194 ..  757218 -  -6.4  -3.21099   GGGCGGCATCATCAA         GCCCGAGCACA TCCG TCTGC-CGGGC          TACGGCGCGGCGCAG  54 313
        phhA  754779 ..  754816 - -11.9  -2.52543   ACCCTGTCGAACGGA   TGACGGCCGTGGTGAGC CTCA GCCCACCACGAGCGCCG    CACAGGGCCGAATCA  64 38
LQF05_RS03385 NONE
LQF05_RS03380  753105 ..  753120 -    -6  -3.28712   GCGGCGTCGCCAGAA              GCGGCG TCAC CGGCGC               GCACCTTCACATCGT  52 41
LQF05_RS03375  752118 ..  752137 -  -4.8  -3.07994   GCGAATGCGAGTCAA            TGGCCGCG CGGG CGCGGCGG             GCCTCGGTCGATGCA  46 59
        cynS  751482 ..  751500 -  -8.8  -3.66732   CAACCAGCGCAACAA             CGCCGG GCAGACG CCGGCG             ATGTACGCCGCGCTG  65 162
        codB NONE
        codA  746458 ..  746478 - -12.5  -2.82623   CTTCCGCGAGAACGA            CCCGAGCCG AGC CGGCTCGGT            GATGATCGGCGTCGC  66 158
LQF05_RS03340  745034 ..  745060 -  -6.4  -4.36914   GGTTTTGTTACAAAA         CGGGCGACGTGG CCA CCAGGCCGGCCA         GGACCACGTCGATTC  74 52
LQF05_RS03335  744584 ..  744615 - -16.6  -3.53012   GCGGCTGCTCTGAAA      CGCAAAAGCCCGGC GAAT GCCGGGCTTTCGGG       CGAGCATCGCGGCTC 100 39
LQF05_RS03325  742675 ..  742689 -    -7  -3.53012   TTCTCTGCCCGGAAA               CCAGCG GCC CGCAGG               CGGTGCAGTTCGCCG  57 244
LQF05_RS03315  740476 ..  740499 -  -7.4  -3.28712   CGCGGTGGGGGAGAA          CCCGCAGGC GGCGGAT GCC-GCGGG          CATTTCCGTGCTCGG  57 423
LQF05_RS03280 NONE
LQF05_RS03275  732378 ..  732405 - -20.6  -2.78816   TCAGGGTGCATGAGA        CCGGCCGGTGAC CCTG GCCACCGGCCGG         CTGTCCATCACTGCT  95 33
LQF05_RS03265 NONE
LQF05_RS03260  730432 ..  730446 -  -7.8  -3.02511   TGGAGCTGGTCAAGA               TCCGCG TCT CGCAGA               TCAACGGGTGCGCCT  54 385
LQF05_RS03250  729305 ..  729324 -    -5  -2.70932   CCGCTGTCGCAATGA            CAAGGTTC CCAC GAATCTTG             CCAGCATCGCGCCAT  43 105
LQF05_RS03245 NONE
LQF05_RS03240 NONE
        rutA NONE
        rutB NONE
        rutC NONE
        rutD NONE
LQF05_RS03200 NONE
        rutF  720647 ..  720673 - -20.8  -5.10461   CGCAGGCAAGAAAAA         GCCCGCGGCGCG GTT CGCGCGGCGGGC         TCGGGTGGTGATGGG 100 51
        dksA NONE
        zigA  718870 ..  718910 -  -6.8  -3.03124   GGGTATCGCCGAACA GCTGCCG-CGGCTGCGGGCG AGT CGC-CGCAAGCGCCAGCATC AGGCGACCTGCTCGT  52 24
LQF05_RS03180  718207 ..  718227 -  -3.3  -4.12188   GGAGGAGTGCGAAAA           GATGGCTG CGTGAT CAGCC-TC            GTCGATCCGAAGGGC  59 63
LQF05_RS03170  717060 ..  717072 -    -2  -3.54951   CAGCGCACCATACAA                TTGT TATCC ACAA                TTGCTTCCACAGTTA  47 59
LQF05_RS03165  715703 ..  715717 -  -2.8  -3.14132   CCTTGCGCCGACGAA               TGGC TCAGTAG GCCA               GGCGGGCGTCCAGGC  43 15
LQF05_RS03160  715346 ..  715361 - -10.4  -3.28712   GGGGGCGCTGCACAA              CGGCAC CGCG GTGCCG               CTGGCGGCGATCATA  65 106
LQF05_RS03150  713184 ..  713203 -  -3.6  -3.33261   TGGCAAGCTTGAGAA            TCGATC CATCCAAC GATCGA             GGAGAACGACGATGC  47 240
LQF05_RS03140 NONE
        cueR NONE
LQF05_RS03130  707770 ..  707791 -  -2.1  -3.95456   AAATGGAAGAGGAAA           CGCAGCATG CCGA CGCGCTGCT            CAAGCGCATCCTGTT  57 360
LQF05_RS03120 NONE
LQF05_RS03115 NONE
LQF05_RS03110  701657 ..  701685 - -12.3  -2.52623   CGGGGCGCAGAAGAC        GGCGAGCCGGACG AGG CGCCCGAGCCGCC        CTGGATGAAGGGGTG  68 118
         ada NONE
LQF05_RS03095 NONE
LQF05_RS03090  698121 ..  698131 -  -3.2  -3.92373   CAGCGCACGCAGAAA                 TCCA CGG CGGA                 AATCGAGCAGATGAT  56 384
LQF05_RS03065  692414 ..  692427 -  -3.8  -3.29471   CGTCGAGCAGATGAA               CGTC ACCAAG GACG                ACATGGCGCGCCGTT  47 360
LQF05_RS03045  688722 ..  688754 - -13.3  -2.56271   GCGTCAGTAGAAGAG      GGGCGCCTGGCGCAG TGG CTGCGCCAGGCGATG      GATCAGTGACGGCTC  72 28
LQF05_RS03035  685153 ..  685176 -   -11  -3.05384   TTGCCGCGCAGGGAA          GGAGCATGCC GGCA GGCATGCTCG           GCGCGGATCAGGTGT  68 33
LQF05_RS03030  684869 ..  684881 -  -4.7  -4.19624   TAGCTGCAAGAGAAA                CGGCG GCG CGACG                GGGCGAGCGAAGCTC  65 39
LQF05_RS03025  683456 ..  683481 - -13.3   -4.3534   CGGCAAGCATGAAAA         GCTGGATGTCC ATAC GGGCATCCAGC          TTTTTTATTGCCTGC 100 90
LQF05_RS02990  677373 ..  677383 -  -2.4  -3.06492   CCATTCAGTCGAACA                 GGCC GAA GGTC                 AGGCGGCTCCACCAG  41 4
LQF05_RS02985 NONE
LQF05_RS02980 NONE
LQF05_RS02975  673728 ..  673741 -  -2.3   -3.9461   GCTGGCCAAGAAGAA               CGCCA CGAT CAGCG                TCAGGCAGATCATTC  57 242
LQF05_RS02965 NONE
LQF05_RS02960  668767 ..  668799 - -14.2  -2.65298   CTCACCCAGCACAAC     GGC-TTGCCGCCGCG CAGC CACGACGGCAACGCC      TGGGACAAGCGCGAG  70 179
LQF05_RS02950  664579 ..  664607 -  -2.9  -3.14564   CGAGCTGCTGACCAA        GGTGACCGGGCGG GTG CCGCGCCGTTACA        TCGGCTGATCGGCCG  43 21
LQF05_RS02900  653757 ..  653771 -   -10  -2.87564   TTACTGCCTGAGACA               CGCATC GAT GATGCG               GGTTTCATTTGAAGA  62 42
LQF05_RS02895  653551 ..  653567 - -13.7  -5.37593   GCTGAAACGAAAAAA              CCGAGCC AGG GGCTCGG              TTTTTTCTTGAAGAG 100 41
        queG  639278 ..  639304 - -13.6  -2.52543   AGCTGCGCCAACTGA         GCGCCGCCGCGC CCG ACACCGCGGCGC         TCCCGGCGCCCTAGC  72 48
LQF05_RS02810  633217 ..  633227 -  -8.2  -3.05844   CCCGGCACCGGAATA                 CGGG ATT CCCG                 GTGTTTTGTCGGTGG  56 147
         eat NONE
LQF05_RS02800 NONE
LQF05_RS02795 NONE
        eutC  629251 ..  629267 -  -5.7  -3.04144   CGTCGACGGCGAACA              GCTCGCC GCG GGCAGGC              TTCCAGTTCTTCGGT  48 152
LQF05_RS02775  626228 ..  626259 -  -2.2  -3.60048   GGGGGCGGAAAAAAG      TGGGCGCGATTATAG GCG CAATG-TCGCGCGCA      ATGCACGCCGGCTTC  49 53
         ppa  625616 ..  625632 - -10.8  -4.72272   TGCGGGCATTAAAAA              GCCGGC TTGTG GCCGGC              TTTTCTTCAGTGCCT  89 45
LQF05_RS02745 NONE
LQF05_RS02740 NONE
LQF05_RS02735 NONE
LQF05_RS02730 NONE
LQF05_RS02725 NONE
LQF05_RS02720 NONE
LQF05_RS02715 NONE
LQF05_RS02710  610912 ..  610925 -  -4.5    -3.727   GCCACCATAGCGAAA               CCGTA CGGT CACGG                GAATCCCTTCGAAAG  57 115
LQF05_RS02705 NONE
LQF05_RS02700  607501 ..  607528 -    -2  -3.20723   GGGGCACGAACCTAA        CT-CAGATGCGAA CGC TTCGCAATTGCAG        GCGCTTTGCCGCTAT  43 50
LQF05_RS02695  606972 ..  606986 -  -9.2  -3.58446   GACAGAAAAAAATTA               CGGCCG CTC CAGCCG               CTGGCGCGCCTTGGC  68 8
LQF05_RS02690 NONE
LQF05_RS02685 NONE
LQF05_RS02680 NONE
LQF05_RS02675 NONE
LQF05_RS02670 NONE
LQF05_RS02665  599561 ..  599571 -  -4.6  -4.52345   ACATTAGCAAAGAAA                 CGCC GGT GGCA                 GCCACAAGGTTTGCC  70 100
LQF05_RS02660 NONE
LQF05_RS02655  598330 ..  598343 -  -4.5  -3.78934   GCCCCTCGATAAGAA               CGG-CC CCG GGTCCG               GTAGGGGTTTGACTG  57 57
         dxs  595884 ..  595906 -    -7  -3.54129   CAGATCCTGCGCAAA           CTGGGCTTCA CGG TGAAGCTCAA           ACCCTATATCCAGCG  57 488
LQF05_RS02640  594847 ..  594857 -  -6.8  -3.35867   TGAATGGCCAAGCAA                 GCCT AGC AGGC                 CGTCGACGCCTGACC  56 63
LQF05_RS02635  594157 ..  594203 -  -4.9  -3.62046   CGACCTGCGCAAGAA CGTGCTGGTC-GGCGACGGCTC CACC GCGCCGTCGCCGGTGCTGGACA TCGGTCGGGTCGCCT  55 212
LQF05_RS02625  592389 ..  592410 -  -5.1  -2.78384   TCCGGCTGGACTACA           GCGAGCAGCC GCC GG-TGCTGGC           GGTGCGCCTGCAGGA  44 279
LQF05_RS02610 NONE
LQF05_RS02605  587910 ..  587929 - -13.6   -3.1739   CAGACGAATCGAAGA            GACCACGC CCAG GCGTGGTC             TTTTTCGTTGTGGGC  78 149
LQF05_RS02600  587116 ..  587147 -  -5.1  -2.78463   AGGGCGCGGATTATA      GGCAGTAGCCCTTC GGAAA GTAGGG-TACAGCC      TGTGCGCTGCGTCTC  43 39
LQF05_RS02595  586567 ..  586592 -  -5.3  -3.53012   GGTCGTGCTCGCAAA         GCGTTCGGATCG CGC CGA-CCGGGCGC         CGGTGCGGCGAAATG  55 53
LQF05_RS02590  586029 ..  586063 -  -7.2  -3.01712   TGCGCTTTCGCAAGA    GCGTACCGACCAGCT GGCTGG AGCTGGT-GATTCGC     GAAGGGCGCAATCGC  50 188
        urtA  583989 ..  584003 -  -4.2  -3.60296   GATCGGGACGCGAAA               TCGGTG CGT CACCCA               TCCACCATGGCGACC  54 48
        urtB NONE
        urtC NONE
        urtD  580284 ..  580339 -  -4.8  -3.28712   GCTTTCGGTGGATAA GCCTGCGGCGTTATCCACCCTACG ATTCGACGGG CGTAGGGTGGATG--GCCGAAGCC ATCCACCTGTTTGCT  49 40
        urtE  579459 ..  579514 -  -2.2  -2.71144   CAGCGCTGTCAATCA TCGGCCCGGCGGGAGAGCCGGA-CATT GAC ACCGATCAGGCGCCCCCGTGGGGGCGC TGCAGCAAGGCTAGA  39 36
        mgtA NONE
LQF05_RS02550 NONE
        ureA NONE
LQF05_RS02540 NONE
LQF05_RS02535  573530 ..  573548 -  -4.5  -4.26903   TCCACCCTACGAAAA             GCGCTGT GCCCT AGAGCGC             GCCCATCACCCGCCC  65 17
        ureC  571665 ..  571690 - -14.7   -4.3586   GCACGGATATGAAAA         GCCCAGGCTTG CGGA CAAGCCGGGGC          TTTTCGTTGGCGCTG 100 73
LQF05_RS02525  569857 ..  569882 - -10.4   -4.7497   CTGAGCGATGAAAAA         GGCCGGACAC TCTAGC ATGCCCGGCC          TCGTTTGCAGCGACG 100 42
LQF05_RS02520  568354 ..  568371 -  -7.7   -3.7104   AGGCACACCCAAGAA             CT-GGCCC GGC GGGCCGAG             GAGGTTGCGATGGCC  67 302
LQF05_RS02510  567167 ..  567187 -  -5.4  -3.44051   CCTGTACCAGCACAA           CCGCGCCAC CGCC GTGG-GCAG            CTACAACTTCTTCCG  53 201
LQF05_RS02490  563399 ..  563411 -  -7.7  -2.90075   GTTTGCCGAAGCAGA                GCAAG GGG CTTGC                CAATCGGGCGTTCGG  55 141
        ureE NONE
LQF05_RS02480 NONE
        ureG  561125 ..  561135 -  -2.4  -2.99471   GCAGGTTCATAGAGA                 CTCC TAG GGTG                 GTCGGGCGGACGTCA  41 38
LQF05_RS02470  560332 ..  560347 -    -9  -3.02461   CAACCTGTTCGAACA              GTTGGG GCTG CCCAAC               GACGACGTGTCGATC  56 225
LQF05_RS02450  556240 ..  556253 -  -3.7  -3.08679   TTTCCTGATTTAACA               GGCGG CCTT CTGCC                TTGCTGGCATCGCAC  43 44
LQF05_RS02445  554999 ..  555027 -  -2.9  -3.08133   TATCCAGCGACTGAA        GGCGGCCTTCGGC GAC ACCGAGGACATCC        AGTACCGCGCCCGTC  43 262
LQF05_RS02430 NONE
        thiE  549714 ..  549745 -  -5.8  -4.07568   GCGGGCCTCGCAAAA      CAGGGGCGGGCCG GCATCAG CGACCCGCCG-TG      GCGGAATCAGGGCGT  65 32
        hemL NONE
LQF05_RS02415  547716 ..  547733 -  -8.4  -3.99678   AGGGCGATAACGAAA             GGCTGG AACGAG CCAGCC              GTCACATTATGGATA  69 87
LQF05_RS02410  547064 ..  547094 -  -6.1  -5.00616   GCGTTGTGCAAAAAA       TGACCGGCGAT TATATGCCC ACCGCCGGGCA       GGGGAAAGCGCGGAC  84 72
        miaB  545641 ..  545653 -  -6.2  -3.57185   GTGAGGGAAAGAATA                GCGC TGCGG GCGC                AATGCGGAAAGCACA  57 96
LQF05_RS02400 NONE
        ybeY NONE
LQF05_RS02390  543200 ..  543226 -    -5  -2.75481   GGCTAAGGGCAACGA         GGCGATCCGGCA AGC TGGCCGATCGCT         TGCCGCCCGCGGGCG  43 57
         lnt  541434 ..  541453 -  -4.3  -3.40403   GTGCTTCGAGCAGAA            CGGC-ATC GAGGT GATCGCCG            CGCCCGTCGGCTTTA  49 215
        leuS NONE
        lptE  536766 ..  536785 - -12.1  -3.22475   TTCATGGGCAGAAGA            CGGGGGC GCTACG GCCCCCG             TGCAGGCTCAGCGGA  74 33
        holA NONE
        arfA  535413 ..  535429 -  -2.2  -3.38326   CAGAACGGGAACGAA              GGTGTA ATACA TGCACC              ACTCTCGAAAGGTGT  44 83
LQF05_RS02350  534081 ..  534103 - -16.3  -6.15259   GAACGCAAAAAAAAA           GCCCCGGCA TAACC TGCCGGGGC           TTTTTTCGTTGGCTG 100 48
LQF05_RS02280  520675 ..  520685 -  -8.2  -2.70932   CGCCTGGCGCAACGA                 GGGC GAT GCCC                 TGCCGCTGGCGGACG  53 284
LQF05_RS02260  518564 ..  518589 -  -8.3  -3.27704   ATGCCGCAAACCCAA         CG-GCCTGCG ACATCTG CGCAGGCGCG         CTGCTCAGAGGATGC  59 30
LQF05_RS02255 NONE
LQF05_RS02250  516020 ..  516038 -   -11  -2.78384   TGGCGCTGGACGACA             TCCGCGAC TCC ATCGCGGA             GCTGCGTCATTACCG  62 169
        rsgA  513446 ..  513465 -   -10  -2.70932   GCCGGCGCTCAATGA            GCCGTTGC AGCC GCAACAGC             TGCGCGAGCGGCTGA  59 103
LQF05_RS02220  509967 ..  509981 -  -3.4  -4.67011   AAGTCTAGCGAAAAA               GCTCAG CCC CCGCGC               CTGCCGAACAGACTC  70 13
LQF05_RS02215 NONE
         asd  508155 ..  508192 - -15.7  -2.66316   GGCTCGATGATACTA   CCCGACATT-CGGCAGCC GAG GGCTACCGAAATGTCGCG   CCCGCCTTTTACTGA  78 34
LQF05_RS02205 NONE
LQF05_RS02200 NONE
LQF05_RS02195  502554 ..  502567 -  -2.3   -4.2349   GCTGCAGATCGAAAA               CGGCA AGGT CACCG                GCGTGGCGGTCGAGC  63 340
LQF05_RS02185  499774 ..  499798 -  -7.8  -4.68994   AGTACGACTGAAAAA         GCCCGAC-TGG TGAT CCTGGTCGGGC          TTTTCTTTTTGCGGG  81 124
LQF05_RS02135  489338 ..  489361 -   -21   -3.6608   ACTACCTGAGCCAAA          GCGGGCCGGC CGAT GCCGGCCCGC           TTCGTATCCTCAGAG 100 35
LQF05_RS02125  485278 ..  485315 - -11.3  -2.72461   CAACTTTCTCGAAAT   CTCCGCGCAGCTGCGC GATGCCG GCGCC-CTGCGCGAAG   TGCAGGATGCCGATC  62 299
LQF05_RS02115  483723 ..  483748 -  -6.1  -3.55563   ACCTCATTGGGTAAA         CGGTCGCGCAGT ATA ACTGCA-GTCCG         CCGGCAGCTTAGTGG  55 34
LQF05_RS02110 NONE
LQF05_RS02105 NONE
LQF05_RS02100  480712 ..  480739 -  -6.2  -4.07568   GGGGCTGGTGGAAAA        CAGCTCGACGAC CGCC ATCGTCGAGAAG         ATCCGCGCCCGCTGA  65 75
LQF05_RS02075  474118 ..  474135 -  -8.4  -2.75712   CCACCGAGGCAACCA             TCGGCG GCGGTG CGCCGA              TCCAACACCCGCACA  53 310
        aceE NONE
        aceF  451077 ..  451105 - -11.6   -5.7946   CGCTCAATAAAAAAA        CGCCGCGGGCTC TCTGT GAGAACGCGGCG        TTTTTTTCGCGCGCA 100 42
LQF05_RS01975  447653 ..  447670 -  -4.1  -2.78679   GGCCGGCAGCGAAAG             CGCACCAG CGA CCG-TGCG             TCGCCACGCTTTCCG  41 45
        msrA  446945 ..  446964 -  -5.6  -3.16683   ACTGCACCGCATCAA            TCCGGCAT GCAG ACGCCGGT             CCCGCCGAGTCCGCA  50 2
LQF05_RS01920 NONE
LQF05_RS01915  433778 ..  433827 -  -4.7  -3.50853   CCTGCTCAAGGACAA CATGTCCGGCGACCGCCGCGTGGC GGT GCACCGGGGCGAGGGCTGG-CATG TGCCGCGGGCGCTGA  53 498
LQF05_RS01905 NONE
LQF05_RS01900  431489 ..  431499 -  -8.2  -3.59979   GGCGTCGAGGTGAAA                 GCGC GCG GCGC                 GGCGGCCTGGGATGC  65 124
LQF05_RS01870  424662 ..  424673 -  -4.4  -3.16564   CTCCTAGTCGAGCAA                CTGA CGCA TCAG                 CGAGGCGAGTTCGCC  48 2
LQF05_RS01865  422703 ..  422722 - -16.4  -5.40072   GGGCTGTCAAAAAAA            CGCCCCGC ATCG GCGGGGCG             TTGTAACAATATCTC 100 48
LQF05_RS01860  420837 ..  420861 -  -6.4  -3.54424   CGCTAGCCGGCGAAA         CGG-GGCGATC GGCG GACCGCCTCCA          GACGCTAGAACATCA  58 30
        mscK  417333 ..  417354 -  -9.3  -2.71364   GCATGCGGGCAAGCA           TGGCCCGGC CGGA GCCGAGCCT            GTTCAGGACGTTGGA  57 65
LQF05_RS01850  415684 ..  415708 - -11.3   -2.8085   CGAAGGCAGCGAAAG          CAGCGCCGGGC TGG GCCTGGGGCTG          TTCATCGCCGATCAG  64 159
LQF05_RS01820  407811 ..  407841 -  -7.4  -3.51329   GATCGGCAACTACAA       CATGACCGGCGCAA TGC TGGCGCTGGCCGTG       CTTTCTTGGATCAAC  60 86
LQF05_RS01805 NONE
LQF05_RS01800 NONE
LQF05_RS01795  403913 ..  403923 -  -2.4  -4.42386   GTCGGAGCGATAAAA                 GCCG GTG CGCC                 GTAATCCGTGCGGTC  63 140
LQF05_RS01790  402414 ..  402431 - -14.1  -5.40072   CGGCGGGCAAAAAAA             GGCCCGC CTAG GCGGGCC              AAAGAAAGTGATCGC 100 77
LQF05_RS01735 NONE
LQF05_RS01730  388128 ..  388165 - -19.2  -3.05844   CTCCGTACGCGAAGA   GGAGCGGCCAGCCGGCC CGTGC GGCCGGCTGG-CGCTGC   GTCGGGTTTATTTCT  90 33
LQF05_RS01725 NONE
LQF05_RS01720  386046 ..  386069 -  -6.6  -3.64703   CGCGGCTGAGCCAAA          CTCCTCCTCC GGCC GGATGAGGGG           CGTCGGTTCAGGTAC  60 33
LQF05_RS01710  383639 ..  383652 -  -3.1  -2.71712   CCTGCGCGTGCAAAC               CCTCGC CGA GC-AGG               CCGGCATGACCCTGG  40 258
LQF05_RS01695  380820 ..  380837 -  -3.4  -3.05384   GTTGCTGCGACGGAA             CAG-CGC AGTTG GCGTCTG             ATCGTGCGGTACAGA  43 97
LQF05_RS01690 NONE
LQF05_RS01685 NONE
LQF05_RS01675 NONE
LQF05_RS01670  376634 ..  376644 -  -2.4  -3.61178   GTGAGTCAGCTGAAA                 GCGG GTT CCTC                 CAGGCCGGCCACGCC  49 5
LQF05_RS01665  375518 ..  375568 -  -3.1  -2.78463   AGGTTTTTCATGAGA TTCCACCGGTTGCATCGCGACGGC ACGG GCCGTCGCGATGCG-CTTGCACGA GGATTACTGAACGGC  41 29
LQF05_RS01660 NONE
LQF05_RS01655  373663 ..  373682 - -16.4  -4.58773   GCGAGCAAAGTAAAA            CGCCGCCC GGGT GGGCGGCG             TCCTCGTTCCCATCT 100 49
LQF05_RS01650  372278 ..  372292 -  -7.8  -2.74012   CGATCAGCTCAACCA               GAGCGC GGC GCACTC               CAGCGATGCGGTGTC  51 365
        rarD  368012 ..  368027 -  -4.6  -3.73224   CGAGCTGGCAGGAAA              TCCAGC TTGA GCTGGT               GGGCAACGACCGGCC  58 273
LQF05_RS01620  365299 ..  365314 - -11.8  -5.28176   CGCAGGCATAAAAAA              CCGCCC CGAA GGGCGG               TTCTTCTGTCGCGAC 100 47
LQF05_RS01615 NONE
LQF05_RS01610  362011 ..  362031 -  -2.5  -3.14693   TCCACTACGAATACA            CCTGGTT CGAGAGC ACCCAGG            CCCGTCTGCCGGAGG  42 511
        dbpA  356828 ..  356859 -  -7.8  -2.88544   GGGGACGGGCAGATA      GGGCAGCGCCAGCG CATA CGCTGTCACGGCCG       CGGCCGGGGCTCAAC  55 94
        yccS  354277 ..  354327 -  -3.2   -3.2056   ATGTACAGCGACGAA CTGGACGACA-ACGCACGGTTGC AGAAGG GCTACGCTGCGAGTTTCGTCCAG GCGGCGGCGATGGTG  45 313
LQF05_RS01570  352276 ..  352301 - -12.5  -3.14931   GGCACTTCGCAGTAA         GCGCGGCCC-GG CAC CCTGGGCCGCGG         GCTCAGGGTGTCATG  74 259
LQF05_RS01535  347017 ..  347032 - -11.8  -4.80882   ATCGGACATGAAAAA              GCCCGC GTTT GCGGGC               TTTTTCGTTTCTGCG 100 53
LQF05_RS01495 NONE
LQF05_RS01490  338024 ..  338053 - -12.3  -3.25823   CTTTTCGTACAGCAA       GGGCAGTATCAAA AAGT TTTGATATTGCCC        TTGCGGGTGCAGGGT  74 40
LQF05_RS01485 NONE
        metK  335724 ..  335764 - -18.4  -3.86015   TATCCGGTCCAGAAA GCAGAAAACCCCGCACGGC TCAG GCCG-GCGGGGTTTTCCGT  TGACCGGAGGCTGCT 100 40
LQF05_RS01475  335186 ..  335203 - -14.1   -4.3467   AGCCGCACACGAAAA             CGCCCGC AGAT GCGGGCG              TTTTCAATTACAGCA 100 49
LQF05_RS01460 NONE
        ligB NONE
LQF05_RS01450  329744 ..  329754 -  -2.4  -3.29144   CGAGGCCTGCCACAA                 CGAG TTC CGCG                 CCTACTGAGGCGGCT  44 40
        ahcY NONE
        metF  325928 ..  325945 -  -4.1  -2.95652   CCGAGGGAAGCAAAG             GACATGA GTAA TCCTGTC              TTGTTAGGGGCGAGG  42 245
LQF05_RS01425  324075 ..  324093 - -17.4  -4.16943   CTGCAGATGCGAAAA             CGCCGCCC AGT GGGCGGCG             TTTTCGTTCCGGCGC 100 44
LQF05_RS01395  315298 ..  315331 - -15.3  -3.66921   AACGGCAAGTCTAAA     GCAT-CGGCAGCCCGC TCA GCAGGCCGCCGCACGC     TGCGTGGTGCTCAGC  90 36
LQF05_RS01390  314501 ..  314516 -    -6  -3.40403   CGGCCTGGAGCAGAA              GCTGGC GGAC GCCGGC               CTGATCTGACTGCGG  52 48
        gshB  300084 ..  300109 -  -3.2  -3.75332   AGCTCCGAACTCAAA         GCTGTTAGCT GGTTCA AGCTTGCAGC          TTGGCCGCGATCGCG  54 13
LQF05_RS01340 NONE
LQF05_RS01335 NONE
        ruvX NONE
        pyrR NONE
LQF05_RS01320 NONE
LQF05_RS01315  295135 ..  295176 -  -6.3  -3.28924   GAGCGCGGCCGAGAA GCCTTGGGCCGGAGCGG GCGAGCAG CCGCCCCGGCCGTCTGC  GCTCAGGCCTGGTAG  52 28
LQF05_RS01305 NONE
LQF05_RS01300  292260 ..  292270 -  -8.2  -3.13522   AGGTGCTGATCAATA                 CGCC GCT GGCG                 GCCGACCTGATCCGC  57 298
LQF05_RS01285 NONE
        proC NONE
LQF05_RS01275  287875 ..  287887 -  -4.8  -2.71364   TGATTCGGCGAATTA                TCGG ACCCG CCGA                TGCGCGGTCAATTCA  43 254
LQF05_RS01270  285795 ..  285826 -  -8.8  -3.29613   AAAGTCTAAAGGTAA      GCGCGCTGCAATTCA TCC TGAAATACAGCG-GC      GGCGGGCGCGTTGCC  63 78
LQF05_RS01265 NONE
        metW NONE
LQF05_RS01255 NONE
        rdgB NONE
        hemW NONE
LQF05_RS01240  281112 ..  281130 -  -8.8  -3.59262   CCGGACATGTGGAAA             TCAGCCGG CTG CCGACCGA             GGCGCGCCCCGGCTA  65 351
        arcD  279454 ..  279469 -    -6  -2.87132   GGCCTTGGCGAGAGA              GGGCGC CGGG GCGCCG               GTCAGAGGGACAGGA  48 27
        arcA NONE
LQF05_RS01220 NONE
        arcC  276061 ..  276085 - -15.7  -3.54741   GATCACCGGGGTAAA          CGAAGGGCGCC ACT GGCGCCCTTTG          CTTTTTCACGCCTGG  93 31
        mtgA  271293 ..  271316 -  -3.7  -3.71378   TACTGCACAGTCAAA          CCCCATCGC ACCATG GCGAGCGGG           CGCTAGGTCATCAGG  54 88
LQF05_RS01180  269318 ..  269344 -  -2.3  -3.48276   GGCCTTTTGATATAA        GCGCTTCGTC-AG GGT CTCGACGA-GCGG        CAGCGCTGTCCGTAG  47 7
LQF05_RS01175  266528 ..  266553 - -15.5  -3.36228   TTCAGCAGAAATAGA         TCGCGGGATGCC GAC GGC-TCCCGCGA         TTTTTTTTGCCTGTC  89 56
LQF05_RS01150 NONE
LQF05_RS01145 NONE
        rsmD  258357 ..  258381 -  -8.5  -4.63218   CCCGGCGGAAGAAAA          GCGCCATGCAG GGG CTGAATGGTGC          TGGCCGGGCGGCGGC  81 515
LQF05_RS01130  257066 ..  257120 - -15.2  -2.73124   GGGCATCCTCGAAAT GGATGGCGAGCA-GACCGAGGCGCTG GCCCT CAACGCCTGGATCGTGCTCACC-TCC TGGATCCGCTTCCTT  75 169
LQF05_RS01120 NONE
LQF05_RS01115 NONE
LQF05_RS01110  252825 ..  252838 -  -2.3  -3.31726   TTCCCGGATACAACA               CTCGA TTCA TCGCG                GCGTCCTGACGCATG  44 128
        coaD  252253 ..  252281 -    -6  -3.09015   GGGACATCCAGCGAA       CTCCTGCCGTGGC TCGA ACCACGGCAC-AG        CTAAATTACGACGGC  49 96
LQF05_RS01100 NONE
         ggt  250114 ..  250135 -  -5.7  -3.51597   AATCCGCAATCACAA           GCTGGACGG CCTG CAGACCAGC            TCGCTGATGAACGAC  55 150
LQF05_RS01070  245414 ..  245433 -  -4.8  -3.60296   GACGGGCATTCTAAA            CGAGCGGC AGGC GGCGCGCG             CCGGGTCGGCGGAAA  54 71
LQF05_RS01065  244137 ..  244173 - -13.5  -2.57244   GCATCGAGTAAGGCA    GGGGAAGCGCAGGGCGG TCG CCGCCCTGCGCAACCGG    ATGGCCGATCAGCTG  72 34
        ilvD  240889 ..  240907 - -11.7   -4.7254   AGCGCGCATGAAAAA             GCCCGAC GCAAG GTCGGGC             TTTTTTGTTGCGGCT 100 52
LQF05_RS01040  236921 ..  236946 -  -4.6  -2.70932   CTTTCTGCTCAAGTA         CCTGGCCG GCTGGTCGTT CGGCCCGG          TGTTCTTCCTGCTCA  44 452
LQF05_RS01025  234834 ..  234856 - -20.6  -3.60792   CGCGGAACGGGGAAA           CGGGGAGCCG TTG CGGCTCCCCG           CTGTGGTCGTCAGTC 100 35
LQF05_RS01020 NONE
LQF05_RS01015  231764 ..  231784 -  -6.8  -3.28924   CATGTTTGCGCAGAA           CCGC-GCGC TGGG GCGCAGCAG            CGCAACGCGGGTGTC  54 254
LQF05_RS01005  229645 ..  229655 -  -8.2  -3.14344   CAGCTGTGCGAGGAA                 GGCG AGT CGCC                 CAAGGGCTACGTCGA  57 439
LQF05_RS00975  222438 ..  222448 -  -8.2  -3.63991   GACGACCGGCAAGAA                 CCGC TTC GCGG                 TCGCCCCCGGGCAGG  65 65
LQF05_RS00965  220023 ..  220068 -  -4.5  -2.94099   GCCGCCTATGAGATA TGGCA-GCAGGGCGGCTACGTC GCG GTCGAAGCCTCGCTGCATACCG AGTGGCTGCACCTGC  44 160
LQF05_RS00940  209104 ..  209123 -  -5.6  -3.89614   CCGAACCGTCACAAA            CCCTGCGA GTGC CCTCAGGG             GCGGGTGTAGTAGCC  62 20
LQF05_RS00935 NONE
LQF05_RS00905 NONE
LQF05_RS00900  199280 ..  199328 -  -5.8  -2.96216   CTGGACGAGGAGATA CGCCGTGCCCGCCGCAGCGGCAG CCCG CTGGCAGTGCTGCTGGC-CGACA TCGATCACTTCAAGC  48 431
LQF05_RS00875  192276 ..  192298 - -11.3   -4.1466   ACGGAACCGCGAAAA          CCCGTG-GCC ATAC GGCGCACGGG           TTCTCAGCTGAGGCG  89 79
LQF05_RS00870  189634 ..  189660 - -12.3  -5.01811   GCACCAAATGAAAAA        CCCCGG-CACGC TCGC ACGTGACCGGGG         TTTCAGACGCTTCCG 100 47
        algB NONE
LQF05_RS00840 NONE
LQF05_RS00835  182921 ..  182937 -  -5.7  -3.57263   AGCCGGACGCGGAAA              CCGCGGC GAT GCTGCAG              GTGCTGGTCGCCCAG  57 55
        yihA  176544 ..  176572 -  -2.4  -3.78934   GCCGGCGGACAACAA       CCCGCTGGTACGCG CGC CGCATACC--CTGG       CCGACGTGATCGGCG  53 390
LQF05_RS00750 NONE
LQF05_RS00745  163642 ..  163652 -  -2.4  -2.79785   GTATACCTCAACAAT                 CCGG CCT CTGG                 TCCCGGTTCATCGGG  39 131
        ssrS NONE
LQF05_RS00735  162600 ..  162618 -  -3.8   -4.1021   TCCTAGAACGATAAA             TCACATCG ACT CGACGCAA             GCATTTCGCCTGGTA  59 236
LQF05_RS00725  161949 ..  161961 -  -4.8  -3.21099   GTGCTCGAGCAGGAA                GAGG GCAAG CCTC                TAGTCGACGATCTGC  49 68
LQF05_RS00715  160301 ..  160321 -  -3.8  -3.73775   TCTACGCCCAGGAAA            TGGCGCGC ATGCA GAGCGCCG            GCGAGGCACCCGCCA  56 109
        gpmI  157361 ..  157387 -    -3  -4.60487   TAGTATGCCTAAAAA        GCGGACGGG AAGCTTGAGG CCCGTC-GC         GGGAAGCGAAGGCGT  68 68
LQF05_RS00690 NONE
LQF05_RS00685 NONE
LQF05_RS00680  153379 ..  153392 -  -5.2  -3.02144   GCAGGTGCTCGAACA               GCCC GATCAG GGGC                TGTTTTCCACCACCT  46 496
LQF05_RS00640  147154 ..  147196 - -14.1  -5.75342   TTGGGCGAAAAAAAA CGGCG-CCACACCGCCCGGC TGGA GCCGGAGAGCGTGGACACCG TTGTCCTGAAAAGTC 100 314
LQF05_RS00635 NONE
        ntrB NONE
LQF05_RS00625  144056 ..  144098 -  -7.6  -2.90194   ATGCCGGCAAGCATA CGCCGAACCGCCGCCAGCGC ACGAG ACGCCGGCGGTGGG-CG-CG CCCGATCAGTGCAGG  55 31
        panM  143556 ..  143579 -  -2.2  -3.25823   GCGCGGGCAGACGAA          CTGTCGCGCC GGGT GGTGAGCCAG           CAGCGCGTTCGGCCG  43 63
LQF05_RS00615 NONE
        mutY NONE
LQF05_RS00605 NONE
LQF05_RS00600  139628 ..  139642 -  -8.5   -5.4833   GCAGGCAACAAAAAA               CCCGC ACGGG GCGGG               CTTCTTGTGGGCTTT 100 74
LQF05_RS00595 NONE
LQF05_RS00590  138065 ..  138078 -  -3.7  -3.28712   CCGTGGCCGCTAGAA               GGCAG GCTG CAGCC                CGTGTCGGCGCAGGA  47 6
LQF05_RS00585  135745 ..  135771 -  -2.1  -3.87869   CCAAGCGCCGATAAA         GCGAGGCGCAC GGGCT GTGGGCATCGA         AAAGCTGCCATCTGT  54 104
LQF05_RS00580 NONE
LQF05_RS00575  134014 ..  134058 -   -23  -3.70811   TCATAGAAGCTCAAA CACCGAAGCCCGGTCGGCCAG AAGG CTGGC-GACCGGGCTTCGGCT CGGTTGGATCAGTAA 100 34
LQF05_RS00570 NONE
LQF05_RS00565  132583 ..  132617 -  -7.9  -3.91897   GGCGGGATTCAGAAA    GGGTCACTGCCTCCTT GCAC AAGGAGGCAGTG-CGG     GAATCAGCGTCCCTG  69 29
LQF05_RS00560  131528 ..  131565 - -15.1  -3.48276   CCTTGTGCGAGATAA   GCCAGTTGCATGTAAGT CATC ACTTACATGCAACTATC    TACTCGATCACAGAA  90 78
        tssA NONE
        tssB NONE
        tssC NONE
        tssE NONE
LQF05_RS00535 NONE
LQF05_RS00530 NONE
LQF05_RS00525 NONE
        tssF NONE
        tssG NONE
        tssH NONE
LQF05_RS00505  117390 ..  117402 -  -3.3  -2.87132   TTCCTTCCTTAGAGA                TCGGC CGG GCTGA                TATTCAGCCGTTCCA  42 6
        tssI NONE
LQF05_RS00495 NONE
LQF05_RS00490  111780 ..  111793 -  -6.7  -3.05816   CGAGCCTCTACCTAA               TCTGC CTCA GCAGA                ACTAATATAGTCGCT  52 348
LQF05_RS00485 NONE
LQF05_RS00480 NONE
LQF05_RS00475  107208 ..  107221 -  -5.9  -3.06696   CCGCCCGGCAAGACA               GGACC GGGT GGCCC                GTGGTCGGCAACAGG  49 83
LQF05_RS00470 NONE
LQF05_RS00465 NONE
LQF05_RS00460 NONE
LQF05_RS00455 NONE
LQF05_RS00450 NONE
        rbbA NONE
LQF05_RS00440   98519 ..   98550 - -12.3  -3.74077   GGTTACAGAGGTAAA      CACGGGCTGCTGGC CCGCC GCCAGCC-CCCGTG      CTGCAGGGGCCGCAC  85 60
        rfbB NONE
        rfbA NONE
        rfbC NONE
        rfbD   94881 ..   94932 -  -5.7  -3.35679   GGCGGGGAGCGAGAA GTGCGGTCATGCATGAGGCGCCTG GATGT CGGGCGCATTATGCACG-CTGCGC GAGCCGACGTTCAGC  52 89
LQF05_RS00415 NONE
LQF05_RS00410   91486 ..   91512 - -17.4  -3.21099   GGGTTTCAGGAGCAA         TGCCTGTGCCAA CCG CTGGCACAGGCA         CCTGAAGCCAGCGAG  89 207
        dctP   90126 ..   90144 -  -6.7  -3.64703   GCGGTTGTATCGAAA            GGCAGCAC GGAG GTGC-GCC             GTGAACCAGCCGGGG  60 234
LQF05_RS00400 NONE
        dctM   88134 ..   88153 - -12.1  -5.75342   CCCGGCGAAAAAAAA            GCCCGGC GCGAAG GCCGGGC             TGAAAAGCAGGAAGG 100 54
LQF05_RS00385   86425 ..   86441 -  -2.1  -3.41051   GGATTGGCAGTACAA              CCTGCCG GTG CTGCAGC              GCAAATTCGCCGGTG  45 155
LQF05_RS00375   84895 ..   84920 - -17.7  -4.24342   GGTTTGAGCAACAAA         GAAAGGGCGCA TTGA TGCGCCCTTTC          TCATTCCGTCCATCG 100 69
LQF05_RS00350   80126 ..   80160 -  -2.6  -3.93658   AAGATTCCGAAAGAA     GGTGCCGGCAGCTTCT TCG ACATGCTGGCGGTGCC     GGCCGACGCGAAGAA  55 274
LQF05_RS00325   73886 ..   73897 -  -7.2  -3.64703   GGCGGCGGATGCAAA                CCGC CGTG GCGG                 TCGCTCCGCAGCACG  60 52
LQF05_RS00320 NONE
        aguB   72158 ..   72168 -  -2.4  -3.57561   CGTGAACGGTGGAAA                 GTGC GGC GCGC                 TTTCGAGCTATGAAG  49 50
        aguA NONE
LQF05_RS00305   70405 ..   70427 -  -7.7  -3.30124   GTTCACCGCCGAGAA          CGGCGA-GCG CTTC CGCGTCACCG           CCAGCCTGGGCCTGA  58 185
LQF05_RS00290 NONE
LQF05_RS00285 NONE
LQF05_RS00280 NONE
LQF05_RS00275 NONE
LQF05_RS00270   59941 ..   59953 -  -6.9  -3.39844   GCGATAGCGGAAACA                CCGGG ACT CCCGA                ATATAGTCAGACCCC  56 78
LQF05_RS00265 NONE
LQF05_RS00260 NONE
LQF05_RS00255   55490 ..   55502 -  -3.3  -2.60212   TCAGCAGGTCAGAAC                GCATG GCG CAGGC                CGATCTGCAGCCACT  40 6
LQF05_RS00250   54357 ..   54376 -    -5  -2.80816   CCTGCAGCCACCACA            GCCAGTCGA CCG TC-ACCGGC            GCACCTCCGCGATGG  43 18
LQF05_RS00245   52935 ..   52947 -  -3.3  -3.39895   TGGTGGATCAATGAA                GCGTG GTC CACCC                TACGGTCTTTTGAGC  47 47
LQF05_RS00235   49565 ..   49608 -  -7.3  -3.05384   TGCGTGTTCAGCGAA CCGCCGGCGCGCCCGCGTCT GGCTG AAACGCTGAC-CGCCGGCTT GCCGGTGAAGATGGC  55 285
         zur NONE
        znuC NONE
        znuB NONE
LQF05_RS00210   46066 ..   46076 -  -2.4  -4.07568   CTGGCGCGTGGAAAA                 TCGC TTC GCGG                 GTTTTCCATCCTACG  57 68
LQF05_RS00200 NONE
LQF05_RS00195 NONE
LQF05_RS00190   41015 ..   41030 - -11.8   -5.0925   GGCGAAAACGAAAAA              CCCCGC CGAG GCGGGG               TTTCTGACGCGGGTT 100 52
LQF05_RS00175   36112 ..   36122 -  -6.8  -3.08679   TGCCGTCATCGAACA                 GCTG GAT CAGC                 GCCGGCGTGCCGTGC  51 222
LQF05_RS00150 NONE
LQF05_RS00145   29925 ..   29953 -    -8  -2.71712   CTTGGCCGGCCAAAT        GCCCGCTGGCCA TTGGC TGGCCGACGCGC        GCAGGCATCCATAAG  53 65
LQF05_RS00130   26909 ..   26942 - -16.7  -2.52676   GACCCGGCGAATCGA     CGGCGG-CGCGGCTGC CCT GCAGCGGCGGCCGCCA     CCGTGTTCAGGGCAG  83 32
         def   23304 ..   23321 - -11.3  -5.06816   ACTCGCTAAGAAAAA             GGCTTGC CGTA GCAAGCC              TTTGAGGTTCGGGAA 100 41
         fmt NONE
        rsmB NONE
        trkA   19530 ..   19551 - -15.1  -5.19275   ATTGAGAAAACAAAA           CGGCCCACC ATAA GGCGGGCCG            TTCGGGTAAAAGCGG 100 47
        ehuB   18358 ..   18380 -  -4.6  -3.72576   GGTCGGCGCAGCAAA           CCGGCCGCCC GAC GGGCTTCAGG           CGCCGCAGAGCTCGG  57 21
        ehuC NONE
        ehuD NONE
        ehuA NONE
LQF05_RS00070   15288 ..   15303 -    -9  -3.21416   CATGTGGACGATGAA              GCGCTT CAAG AAGCGC               CCCGCCGGCGAAAAG  59 362
        glyQ NONE
        glyS NONE
        gmhB NONE
LQF05_RS00035 NONE
LQF05_RS00030    7911 ..    7946 - -19.2  -3.53091   ATCGGGCTCGGTAAA    CAAAAGGGGAGCAACC CTGA GGTTGCTCCCCTTTTT     CGCGTTCACGGTCGG 100 48
