locus-tag	class	description
JKJ12_RS00020	COG1595	DNA-templated transcription, initiation
JKJ12_RS00025	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
JKJ12_RS00030	COG3264	Mechanosensitive ion channel
JKJ12_RS00030	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
JKJ12_RS00055	COG0328	RNA-DNA hybrid ribonuclease activity
JKJ12_RS00065	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JKJ12_RS00070	COG3115	cell septum assembly
JKJ12_RS00095	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
JKJ12_RS00100	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
JKJ12_RS00125	COG1309	transcriptional regulator
JKJ12_RS00130	COG0540	Belongs to the ATCase OTCase family
JKJ12_RS00135	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
JKJ12_RS00145	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JKJ12_RS00150	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JKJ12_RS00175	COG4310	Domain of unknown function (DUF2172)
JKJ12_RS00190	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
JKJ12_RS00195	COG0211	Belongs to the bacterial ribosomal protein bL27 family
JKJ12_RS00200	COG0261	This protein binds to 23S rRNA in the presence of protein L20
JKJ12_RS00205	COG0142	geranyltranstransferase activity
JKJ12_RS00210	COG0786	glutamate:sodium symporter activity
JKJ12_RS00215	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
JKJ12_RS00220	COG0330	HflC and HflK could
JKJ12_RS00225	COG0330	HflC and HflK could
JKJ12_RS00230	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JKJ12_RS00235	COG1923	regulation of RNA biosynthetic process
JKJ12_RS00245	COG1609	Transcriptional regulator
JKJ12_RS00250	COG2814	Major facilitator Superfamily
JKJ12_RS00265	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
JKJ12_RS00270	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
JKJ12_RS00275	COG1388	LysM domain
JKJ12_RS00275	COG0860	N-Acetylmuramoyl-L-alanine amidase
JKJ12_RS00280	COG0802	atpase or kinase
JKJ12_RS00285	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
JKJ12_RS00285	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
JKJ12_RS00300	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JKJ12_RS00310	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JKJ12_RS00315	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
JKJ12_RS00320	COG2050	protein possibly involved in aromatic compounds catabolism
JKJ12_RS00350	COG2264	protein methyltransferase activity
JKJ12_RS00385	COG2314	TM2 domain
JKJ12_RS00410	COG0352	thiamine-phosphate diphosphorylase activity
JKJ12_RS00415	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JKJ12_RS00425	COG2022	thiamine diphosphate biosynthetic process
JKJ12_RS00440	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
JKJ12_RS00445	COG1854	S-ribosylhomocysteine lyase activity
JKJ12_RS00470	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JKJ12_RS00475	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JKJ12_RS00480	COG0049	tRNA binding
JKJ12_RS00485	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
JKJ12_RS00500	COG0251	oxidation-reduction process
JKJ12_RS00505	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JKJ12_RS00530	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
JKJ12_RS00545	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JKJ12_RS00560	COG1072	(Pantothenic acid kinase))
JKJ12_RS00575	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JKJ12_RS00580	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
JKJ12_RS00610	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
JKJ12_RS00615	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JKJ12_RS00620	COG0281	malic enzyme
JKJ12_RS00625	COG0254	rRNA binding
JKJ12_RS00630	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JKJ12_RS00635	COG0018	arginyl-trna synthetase
JKJ12_RS00650	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
JKJ12_RS00660	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JKJ12_RS00660	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JKJ12_RS00660	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JKJ12_RS00675	COG2937	Belongs to the GPAT DAPAT family
JKJ12_RS00685	COG0312	modulator of DNA gyrase
JKJ12_RS00700	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JKJ12_RS00705	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
JKJ12_RS00710	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
JKJ12_RS00715	COG3265	gluconokinase activity
JKJ12_RS00720	COG0129	dihydroxy-acid dehydratase activity
JKJ12_RS00725	COG0312	modulator of DNA gyrase
JKJ12_RS00740	COG1792	Involved in formation and maintenance of cell shape
JKJ12_RS00745	COG1077	Cell shape determining protein MreB Mrl
JKJ12_RS00750	COG0629	single-stranded DNA binding
JKJ12_RS00755	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
JKJ12_RS00800	COG2314	TM2 domain
JKJ12_RS00850	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
JKJ12_RS00860	COG3028	Belongs to the UPF0307 family
JKJ12_RS00870	COG2854	intermembrane phospholipid transfer
JKJ12_RS00875	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
JKJ12_RS00880	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
JKJ12_RS00885	COG1127	ABC transporter
JKJ12_RS00890	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
JKJ12_RS00895	COG3117	lipopolysaccharide transmembrane transporter activity
JKJ12_RS00900	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
JKJ12_RS00905	COG1137	ATPase activity
JKJ12_RS00910	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
JKJ12_RS00915	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JKJ12_RS00925	COG1660	Displays ATPase and GTPase activities
JKJ12_RS00930	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JKJ12_RS00935	COG0552	protein localization to endoplasmic reticulum
JKJ12_RS00940	COG0742	ribosomal rna small subunit methyltransferase
JKJ12_RS00945	COG1760	l-serine dehydratase
JKJ12_RS00950	COG0814	amino acid
JKJ12_RS00955	COG0355	proton-transporting ATP synthase activity, rotational mechanism
JKJ12_RS00960	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JKJ12_RS00965	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
JKJ12_RS00970	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
JKJ12_RS00980	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JKJ12_RS00995	COG1475	DNA binding
JKJ12_RS01000	COG1192	Involved in chromosome partitioning
JKJ12_RS01005	COG0357	Ribosomal RNA small subunit methyltransferase G
JKJ12_RS01010	COG0445	tRNA wobble uridine modification
JKJ12_RS01025	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JKJ12_RS01035	COG1328	CTP reductase activity
JKJ12_RS01045	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JKJ12_RS01050	COG2995	paraquat-inducible protein a
JKJ12_RS01055	COG3008	intermembrane lipid transfer
JKJ12_RS01065	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
JKJ12_RS01070	COG0706	membrane insertase activity
JKJ12_RS01075	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
JKJ12_RS01080	COG0594	ribonuclease P activity
JKJ12_RS01085	COG0230	Belongs to the bacterial ribosomal protein bL34 family
JKJ12_RS01090	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JKJ12_RS01100	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JKJ12_RS01105	COG0187	DNA topoisomerase II activity
JKJ12_RS01115	COG0752	glycyl-tRNA synthetase alpha subunit
JKJ12_RS01145	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
JKJ12_RS01150	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JKJ12_RS01155	COG0859	PFAM glycosyl transferase family 9
JKJ12_RS01160	COG3642	lipopolysaccharide core region biosynthetic process
JKJ12_RS01170	COG1519	Transferase
JKJ12_RS01175	COG0859	PFAM glycosyl transferase family 9
JKJ12_RS01180	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JKJ12_RS01185	COG0705	Rhomboid family
JKJ12_RS01190	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JKJ12_RS01195	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JKJ12_RS01200	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
JKJ12_RS01205	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
JKJ12_RS01220	COG2211	Major facilitator Superfamily
JKJ12_RS01225	COG3250	beta-galactosidase activity
JKJ12_RS01245	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
JKJ12_RS01245	COG0316	Belongs to the HesB IscA family
JKJ12_RS01255	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JKJ12_RS01270	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JKJ12_RS01275	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JKJ12_RS01295	COG1879	ABC-type sugar transport system periplasmic component
JKJ12_RS01305	COG1129	ABC transporter
JKJ12_RS01310	COG1172	Belongs to the binding-protein-dependent transport system permease family
JKJ12_RS01315	COG2190	(PTS) system
JKJ12_RS01325	COG3959	Transketolase, thiamine diphosphate binding domain
JKJ12_RS01330	COG3958	Transketolase
JKJ12_RS01335	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JKJ12_RS01345	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
JKJ12_RS01350	COG0494	nUDIX hydrolase
JKJ12_RS01360	COG0137	argininosuccinate synthase activity
JKJ12_RS01365	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
JKJ12_RS01365	COG0165	Argininosuccinate lyase
JKJ12_RS01375	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JKJ12_RS01390	COG2885	chlorophyll binding
JKJ12_RS01390	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
JKJ12_RS01395	COG1879	ABC-type sugar transport system periplasmic component
JKJ12_RS01410	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JKJ12_RS01415	COG1758	RNA polymerase activity
JKJ12_RS01420	COG0194	GDP metabolic process
JKJ12_RS01440	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JKJ12_RS01445	COG0626	cystathionine gamma-synthase activity
JKJ12_RS01450	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
JKJ12_RS01460	COG1013	pyruvate-flavodoxin oxidoreductase activity
JKJ12_RS01465	COG0674	pyruvate-flavodoxin oxidoreductase activity
JKJ12_RS01485	COG2011	ABC-type metal ion transport system permease component
JKJ12_RS01490	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JKJ12_RS01495	COG1464	Belongs to the NlpA lipoprotein family
JKJ12_RS01500	COG2204	response regulator
JKJ12_RS01505	COG3852	Histidine kinase
JKJ12_RS01510	COG1217	gtp-binding protein TYPA
JKJ12_RS01530	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JKJ12_RS01535	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JKJ12_RS01540	COG0006	proline dipeptidase activity
JKJ12_RS01545	COG0339	signal peptide processing
JKJ12_RS01555	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
JKJ12_RS01565	COG1575	Belongs to the MenA family. Type 1 subfamily
JKJ12_RS01570	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JKJ12_RS01575	COG0569	domain protein
JKJ12_RS01580	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JKJ12_RS01580	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JKJ12_RS01585	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
JKJ12_RS01600	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JKJ12_RS01605	COG0009	L-threonylcarbamoyladenylate synthase
JKJ12_RS01610	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JKJ12_RS01615	COG0742	ribosomal rna small subunit methyltransferase
JKJ12_RS01625	COG2211	Major facilitator Superfamily
JKJ12_RS01630	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
JKJ12_RS01635	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JKJ12_RS01640	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JKJ12_RS01655	COG0587	DNA-directed DNA polymerase activity
JKJ12_RS01665	COG0166	Belongs to the GPI family
JKJ12_RS01680	COG0494	nUDIX hydrolase
JKJ12_RS01685	COG0210	DNA helicase
JKJ12_RS01695	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
JKJ12_RS01735	COG0697	spore germination
JKJ12_RS01740	COG2315	Protein conserved in bacteria
JKJ12_RS01745	COG3266	domain, Protein
JKJ12_RS01745	COG0515	serine threonine protein kinase
JKJ12_RS01765	COG0835	chemotaxis
JKJ12_RS01765	COG0784	Response regulator, receiver
JKJ12_RS01810	COG0494	nUDIX hydrolase
JKJ12_RS01815	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
JKJ12_RS01830	COG2364	Membrane
JKJ12_RS01875	COG1051	belongs to the nudix hydrolase family
JKJ12_RS01880	COG1393	Belongs to the ArsC family
JKJ12_RS01885	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
JKJ12_RS01890	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JKJ12_RS01950	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JKJ12_RS01955	COG1846	Transcriptional regulator
JKJ12_RS01960	COG0656	L-ascorbic acid biosynthetic process
JKJ12_RS01965	COG2721	sulfolactate sulfo-lyase activity
JKJ12_RS01970	COG4948	Mandelate Racemase Muconate Lactonizing
JKJ12_RS01975	COG2610	gluconate transmembrane transporter activity
JKJ12_RS01980	COG2084	Dehydrogenase
JKJ12_RS01985	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JKJ12_RS01995	COG1929	Belongs to the glycerate kinase type-1 family
JKJ12_RS02005	COG0840	transmembrane signaling receptor activity
JKJ12_RS02015	COG0246	Mannitol dehydrogenase
JKJ12_RS02020	COG1063	alcohol dehydrogenase
JKJ12_RS02030	COG1070	Carbohydrate kinase
JKJ12_RS02035	COG1172	Belongs to the binding-protein-dependent transport system permease family
JKJ12_RS02040	COG1129	ABC transporter
JKJ12_RS02070	COG2723	6-phospho-beta-galactosidase activity
JKJ12_RS02075	COG0477	Major facilitator Superfamily
JKJ12_RS02090	COG2356	endonuclease I
JKJ12_RS02095	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
JKJ12_RS02095	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
JKJ12_RS02105	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JKJ12_RS02110	COG2160	L-arabinose isomerase activity
JKJ12_RS02115	COG1172	Belongs to the binding-protein-dependent transport system permease family
JKJ12_RS02140	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JKJ12_RS02150	COG0733	neurotransmitter:sodium symporter activity
JKJ12_RS02155	COG0716	FMN binding
JKJ12_RS02160	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
JKJ12_RS02175	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JKJ12_RS02180	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JKJ12_RS02185	COG1309	transcriptional regulator
JKJ12_RS02200	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JKJ12_RS02215	COG0204	Acyl-transferase
JKJ12_RS02225	COG0129	dihydroxy-acid dehydratase activity
JKJ12_RS02255	COG0583	DNA-binding transcription factor activity
JKJ12_RS02270	COG0367	asparagine synthase
JKJ12_RS02275	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
JKJ12_RS02285	COG0174	glutamine synthetase
JKJ12_RS02290	COG0067	glutamate synthase
JKJ12_RS02290	COG0070	glutamate synthase
JKJ12_RS02290	COG0069	glutamate synthase activity
JKJ12_RS02310	COG1464	Belongs to the NlpA lipoprotein family
JKJ12_RS02315	COG3071	HemY protein
JKJ12_RS02335	COG0019	diaminopimelate decarboxylase activity
JKJ12_RS02340	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
JKJ12_RS02345	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
JKJ12_RS02345	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
JKJ12_RS02365	COG0210	DNA helicase
JKJ12_RS02380	COG0346	lactoylglutathione lyase activity
JKJ12_RS02395	COG1181	Belongs to the D-alanine--D-alanine ligase family
JKJ12_RS02420	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
JKJ12_RS02430	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JKJ12_RS02430	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JKJ12_RS02445	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JKJ12_RS02450	COG0215	cysteine-tRNA ligase activity
JKJ12_RS02455	COG3593	DNA synthesis involved in DNA repair
JKJ12_RS02460	COG1561	YicC-like family, N-terminal region
JKJ12_RS02465	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JKJ12_RS02470	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JKJ12_RS02480	COG0051	transcription antitermination factor activity, RNA binding
JKJ12_RS02485	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
JKJ12_RS02495	COG0089	rRNA binding
JKJ12_RS02500	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
JKJ12_RS02505	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
JKJ12_RS02510	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
JKJ12_RS02515	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
JKJ12_RS02520	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JKJ12_RS02525	COG0255	Belongs to the universal ribosomal protein uL29 family
JKJ12_RS02530	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
JKJ12_RS02535	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
JKJ12_RS02540	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
JKJ12_RS02545	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
JKJ12_RS02550	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JKJ12_RS02555	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JKJ12_RS02560	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
JKJ12_RS02565	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
JKJ12_RS02570	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
JKJ12_RS02575	COG1841	ribosomal large subunit assembly
JKJ12_RS02585	COG0201	protein transport
JKJ12_RS02590	COG0257	Belongs to the bacterial ribosomal protein bL36 family
JKJ12_RS02595	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
JKJ12_RS02600	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
JKJ12_RS02605	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
JKJ12_RS02610	COG0202	RNA polymerase activity
JKJ12_RS02645	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JKJ12_RS02660	COG0762	integral membrane protein
JKJ12_RS02665	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JKJ12_RS02680	COG0010	Belongs to the arginase family
JKJ12_RS02690	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
JKJ12_RS02700	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JKJ12_RS02705	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
JKJ12_RS02710	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
JKJ12_RS02715	COG4783	chaperone-mediated protein folding
JKJ12_RS02725	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
JKJ12_RS02730	COG0671	phosphoesterase, PA-phosphatase related
JKJ12_RS02750	COG3083	sulfuric ester hydrolase activity
JKJ12_RS02770	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
JKJ12_RS02780	COG1115	amino acid carrier protein
JKJ12_RS02785	COG2040	homocysteine
JKJ12_RS02795	COG1862	Preprotein translocase
JKJ12_RS02800	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JKJ12_RS02805	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JKJ12_RS02815	COG0640	Transcriptional regulator
JKJ12_RS02820	COG1104	cysteine desulfurase activity
JKJ12_RS02830	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JKJ12_RS02840	COG0820	rRNA (adenine-C2-)-methyltransferase activity
JKJ12_RS02850	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
JKJ12_RS02860	COG2976	Protein conserved in bacteria
JKJ12_RS02865	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JKJ12_RS02875	COG1879	ABC-type sugar transport system periplasmic component
JKJ12_RS02910	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
JKJ12_RS02930	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JKJ12_RS02935	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JKJ12_RS02940	COG0232	Belongs to the dGTPase family. Type 2 subfamily
JKJ12_RS02960	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JKJ12_RS02960	COG0301	tRNA thio-modification
JKJ12_RS02975	COG4591	ABC-type transport system involved in lipoprotein release permease component
JKJ12_RS02980	COG1136	(ABC) transporter
JKJ12_RS02985	COG4591	ABC-type transport system involved in lipoprotein release permease component
JKJ12_RS03000	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JKJ12_RS03010	COG1722	exodeoxyribonuclease VII activity
JKJ12_RS03015	COG0142	geranyltranstransferase activity
JKJ12_RS03020	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JKJ12_RS03025	COG1666	GTP binding
JKJ12_RS03030	COG2814	Major facilitator Superfamily
JKJ12_RS03045	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
JKJ12_RS03050	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
JKJ12_RS03055	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
JKJ12_RS03060	COG2871	sodium ion transport
JKJ12_RS03075	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
JKJ12_RS03085	COG1234	tRNA 3'-trailer cleavage
JKJ12_RS03090	COG0052	Belongs to the universal ribosomal protein uS2 family
JKJ12_RS03095	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JKJ12_RS03100	COG0528	UMP kinase activity
JKJ12_RS03105	COG0233	cytoplasmic translational termination
JKJ12_RS03110	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
JKJ12_RS03115	COG0575	Belongs to the CDS family
JKJ12_RS03120	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
JKJ12_RS03125	COG0750	zinc metalloprotease
JKJ12_RS03140	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JKJ12_RS03145	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JKJ12_RS03150	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JKJ12_RS03165	COG0825	malonyl-CoA metabolic process
JKJ12_RS03170	COG0037	tRNA processing
JKJ12_RS03190	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JKJ12_RS03225	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JKJ12_RS03235	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JKJ12_RS03250	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JKJ12_RS03270	COG0800	Aldolase
JKJ12_RS03275	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JKJ12_RS03280	COG2721	sulfolactate sulfo-lyase activity
JKJ12_RS03285	COG0246	Mannitol dehydrogenase
JKJ12_RS03290	COG1063	alcohol dehydrogenase
JKJ12_RS03305	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JKJ12_RS03330	COG2721	sulfolactate sulfo-lyase activity
JKJ12_RS03335	COG0246	Mannitol dehydrogenase
JKJ12_RS03345	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JKJ12_RS03350	COG0800	Aldolase
JKJ12_RS03370	COG1904	glucuronate isomerase
JKJ12_RS03375	COG1312	Catalyzes the dehydration of D-mannonate
JKJ12_RS03380	COG0246	Mannitol dehydrogenase
JKJ12_RS03395	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
JKJ12_RS03400	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
JKJ12_RS03405	COG0840	transmembrane signaling receptor activity
JKJ12_RS03415	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JKJ12_RS03425	COG2969	positive regulation of protein catabolic process
JKJ12_RS03435	COG3107	peptidoglycan biosynthetic process
JKJ12_RS03445	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JKJ12_RS03470	COG0673	inositol 2-dehydrogenase activity
JKJ12_RS03475	COG0346	lactoylglutathione lyase activity
JKJ12_RS03480	COG2223	nitrite transmembrane transporter activity
JKJ12_RS03495	COG1794	racemase activity, acting on amino acids and derivatives
JKJ12_RS03500	COG2358	TRAP transporter, solute receptor (TAXI family
JKJ12_RS03505	COG2001	Belongs to the MraZ family
JKJ12_RS03510	COG0275	rRNA processing
JKJ12_RS03520	COG0768	penicillin binding
JKJ12_RS03525	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JKJ12_RS03530	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JKJ12_RS03535	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JKJ12_RS03540	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JKJ12_RS03545	COG0772	Belongs to the SEDS family
JKJ12_RS03550	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JKJ12_RS03555	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
JKJ12_RS03560	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
JKJ12_RS03565	COG0849	cell division
JKJ12_RS03570	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JKJ12_RS03580	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
JKJ12_RS03585	COG3023	N-Acetylmuramoyl-L-alanine amidase
JKJ12_RS03595	COG0039	L-malate dehydrogenase activity
JKJ12_RS03600	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
JKJ12_RS03605	COG0534	Mate efflux family protein
JKJ12_RS03620	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JKJ12_RS03625	COG2011	ABC-type metal ion transport system permease component
JKJ12_RS03630	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JKJ12_RS03635	COG0228	four-way junction DNA binding
JKJ12_RS03645	COG0336	Belongs to the RNA methyltransferase TrmD family
JKJ12_RS03650	COG0335	large ribosomal subunit rRNA binding
JKJ12_RS03660	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JKJ12_RS03675	COG3066	DNA modification
JKJ12_RS03680	COG1051	belongs to the nudix hydrolase family
JKJ12_RS03690	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
JKJ12_RS03695	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
JKJ12_RS03700	COG0513	Belongs to the DEAD box helicase family
JKJ12_RS03705	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JKJ12_RS03710	COG1737	Transcriptional regulator
JKJ12_RS03715	COG0297	glycogen (starch) synthase activity
JKJ12_RS03720	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JKJ12_RS03730	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
JKJ12_RS03735	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JKJ12_RS03740	COG2813	Specifically methylates the guanine in position
JKJ12_RS03745	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
JKJ12_RS03755	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
JKJ12_RS03770	COG0237	dephospho-CoA kinase activity
JKJ12_RS03780	COG4974	Belongs to the 'phage' integrase family
JKJ12_RS03795	COG0545	Peptidyl-prolyl cis-trans isomerase
JKJ12_RS03800	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
JKJ12_RS03805	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JKJ12_RS03820	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JKJ12_RS03820	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JKJ12_RS03840	COG0583	DNA-binding transcription factor activity
JKJ12_RS03845	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
JKJ12_RS03855	COG0439	Biotin carboxylase
JKJ12_RS03865	COG4232	protein-disulfide reductase activity
JKJ12_RS03880	COG0840	transmembrane signaling receptor activity
JKJ12_RS03900	COG0629	single-stranded DNA binding
JKJ12_RS03905	COG1373	ATPase (AAA superfamily
JKJ12_RS03910	COG0534	Mate efflux family protein
JKJ12_RS03920	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
JKJ12_RS03930	COG0789	Transcriptional regulator
JKJ12_RS03940	COG1979	alcohol dehydrogenase
JKJ12_RS03960	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
JKJ12_RS03970	COG0840	transmembrane signaling receptor activity
JKJ12_RS03975	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JKJ12_RS04000	COG1733	regulation of RNA biosynthetic process
JKJ12_RS04005	COG1979	alcohol dehydrogenase
JKJ12_RS04010	COG2249	NAD(P)H dehydrogenase (quinone) activity
JKJ12_RS04020	COG1879	ABC-type sugar transport system periplasmic component
JKJ12_RS04025	COG0488	(ABC) transporter
JKJ12_RS04040	COG3527	Alpha-acetolactate decarboxylase
JKJ12_RS04045	COG0840	transmembrane signaling receptor activity
JKJ12_RS04050	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
JKJ12_RS04055	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
JKJ12_RS04060	COG0659	secondary active sulfate transmembrane transporter activity
JKJ12_RS04085	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
JKJ12_RS04100	COG0732	type I restriction modification DNA specificity domain
JKJ12_RS04115	COG1609	Transcriptional regulator
JKJ12_RS04120	COG3842	ATPase activity
JKJ12_RS04125	COG2182	Extracellular solute-binding protein
JKJ12_RS04130	COG1175	transmembrane transport
JKJ12_RS04135	COG3833	ABC-type maltose transport systems, permease component
JKJ12_RS04140	COG3867	Arabinogalactan endo-beta-1,4-galactanase
JKJ12_RS04145	COG1874	Beta-galactosidase
JKJ12_RS04200	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JKJ12_RS04210	COG2208	phosphoserine phosphatase activity
JKJ12_RS04210	COG2770	Histidine kinase
JKJ12_RS04215	COG0425	Belongs to the sulfur carrier protein TusA family
JKJ12_RS04225	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
JKJ12_RS04230	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
JKJ12_RS04240	COG0560	Phosphoserine phosphatase
JKJ12_RS04245	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JKJ12_RS04255	COG0561	phosphatase activity
JKJ12_RS04260	COG4178	(ABC) transporter
JKJ12_RS04270	COG0739	heme binding
JKJ12_RS04285	COG0151	Belongs to the GarS family
JKJ12_RS04290	COG0138	bifunctional purine biosynthesis protein purh
JKJ12_RS04295	COG0776	regulation of translation
JKJ12_RS04300	COG0033	Phosphoglucomutase
JKJ12_RS04320	COG1115	amino acid carrier protein
JKJ12_RS04325	COG2199	diguanylate cyclase activity
JKJ12_RS04325	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
JKJ12_RS04330	COG0586	Pfam SNARE associated Golgi protein
JKJ12_RS04335	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
JKJ12_RS04340	COG1674	ftsk spoiiie
JKJ12_RS04350	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JKJ12_RS04370	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JKJ12_RS04375	COG1286	toxin biosynthetic process
JKJ12_RS04385	COG2358	TRAP transporter, solute receptor (TAXI family
JKJ12_RS04395	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JKJ12_RS04415	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JKJ12_RS04425	COG0291	Belongs to the bacterial ribosomal protein bL35 family
JKJ12_RS04430	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
JKJ12_RS04445	COG4794	Type iii secretion
JKJ12_RS04460	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JKJ12_RS04465	COG1366	Belongs to the anti-sigma-factor antagonist family
JKJ12_RS04475	COG2770	Histidine kinase
JKJ12_RS04475	COG2208	phosphoserine phosphatase activity
JKJ12_RS04495	COG4792	protein secretion
JKJ12_RS04545	COG1450	Type ii and iii secretion system protein
JKJ12_RS04610	COG0786	glutamate:sodium symporter activity
JKJ12_RS04620	COG0433	COG0433 Predicted ATPase
JKJ12_RS04625	COG4669	(LipO)protein
JKJ12_RS04645	COG0741	lytic transglycosylase activity
JKJ12_RS04650	COG1366	Belongs to the anti-sigma-factor antagonist family
JKJ12_RS04685	COG0786	glutamate:sodium symporter activity
JKJ12_RS04710	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JKJ12_RS04715	COG4790	Type iii secretion
JKJ12_RS04725	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JKJ12_RS04750	COG0372	Belongs to the citrate synthase family
JKJ12_RS04755	COG0788	formyltetrahydrofolate deformylase activity
JKJ12_RS04765	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JKJ12_RS04780	COG0366	Alpha amylase catalytic
JKJ12_RS04785	COG2195	Cleaves the N-terminal amino acid of tripeptides
JKJ12_RS04790	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
JKJ12_RS04800	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JKJ12_RS04805	COG0589	response to stress
JKJ12_RS04825	COG0728	peptidoglycan biosynthetic process
JKJ12_RS04835	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JKJ12_RS04840	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
JKJ12_RS04860	COG2853	Lipoprotein
JKJ12_RS04865	COG1605	Chorismate mutase
JKJ12_RS04865	COG0287	Prephenate dehydrogenase
JKJ12_RS04875	COG0501	Belongs to the peptidase M48B family
JKJ12_RS04880	COG2089	acid synthase
JKJ12_RS04885	COG4213	ABC transporter substrate-binding protein
JKJ12_RS04895	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JKJ12_RS04900	COG0840	transmembrane signaling receptor activity
JKJ12_RS04920	COG0675	Transposase, IS605 OrfB family
JKJ12_RS04945	COG0840	transmembrane signaling receptor activity
JKJ12_RS04950	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JKJ12_RS04955	COG1640	4-alpha-glucanotransferase
JKJ12_RS04960	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
JKJ12_RS04970	COG0616	signal peptide processing
JKJ12_RS05000	COG0517	IMP dehydrogenase activity
JKJ12_RS05000	COG0516	GMP reductase activity
JKJ12_RS05025	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JKJ12_RS05035	COG0778	Nitroreductase
JKJ12_RS05080	COG1794	racemase activity, acting on amino acids and derivatives
JKJ12_RS05090	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JKJ12_RS05095	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
JKJ12_RS05100	COG0217	transcriptional regulatory protein
JKJ12_RS05115	COG0471	metal ion transport
JKJ12_RS05120	COG0837	glucose binding
JKJ12_RS05170	COG0205	6-phosphofructokinase activity
JKJ12_RS05175	COG0149	triose-phosphate isomerase activity
JKJ12_RS05185	COG0527	aspartate kinase activity
JKJ12_RS05185	COG0460	homoserine dehydrogenase
JKJ12_RS05190	COG0083	homoserine kinase activity
JKJ12_RS05195	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
JKJ12_RS05200	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
JKJ12_RS05205	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
JKJ12_RS05205	COG1918	ferrous iron import across plasma membrane
JKJ12_RS05220	COG2217	Heavy metal translocating P-type atpase
JKJ12_RS05235	COG2217	Heavy metal translocating P-type atpase
JKJ12_RS05240	COG1522	sequence-specific DNA binding
JKJ12_RS05255	COG3706	GGDEF domain
JKJ12_RS05260	COG2199	diguanylate cyclase activity
JKJ12_RS05260	COG2203	Gaf domain
JKJ12_RS05275	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
JKJ12_RS05300	COG2223	nitrite transmembrane transporter activity
JKJ12_RS05315	COG0675	Transposase, IS605 OrfB family
JKJ12_RS05335	COG0133	tryptophan synthase activity
JKJ12_RS05340	COG0134	indole-3-glycerol-phosphate synthase activity
JKJ12_RS05340	COG0135	phosphoribosylanthranilate isomerase activity
JKJ12_RS05345	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JKJ12_RS05375	COG0512	Glutamine amidotransferase of anthranilate synthase
JKJ12_RS05380	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JKJ12_RS05400	COG3842	ATPase activity
JKJ12_RS05415	COG0439	Biotin carboxylase
JKJ12_RS05455	COG0598	Magnesium transport protein CorA
JKJ12_RS05470	COG1971	Probably functions as a manganese efflux pump
JKJ12_RS05475	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JKJ12_RS05480	COG0572	uridine kinase
JKJ12_RS05490	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
JKJ12_RS05510	COG2207	Transcriptional regulator
JKJ12_RS05515	COG2211	Major facilitator Superfamily
JKJ12_RS05520	COG0366	Alpha amylase catalytic
JKJ12_RS05525	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JKJ12_RS05530	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
JKJ12_RS05530	COG0116	Belongs to the methyltransferase superfamily
JKJ12_RS05535	COG0488	(ABC) transporter
JKJ12_RS05540	COG0613	PHP domain protein
JKJ12_RS05560	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
JKJ12_RS05565	COG0590	tRNA wobble adenosine to inosine editing
JKJ12_RS05575	COG0009	L-threonylcarbamoyladenylate synthase
JKJ12_RS05590	COG2502	aspartate--ammonia ligase
JKJ12_RS05600	COG5001	Diguanylate cyclase
JKJ12_RS05605	COG2203	Gaf domain
JKJ12_RS05605	COG2199	diguanylate cyclase activity
JKJ12_RS05610	COG0826	peptidase U32
JKJ12_RS05630	COG0318	PFAM AMP-dependent synthetase and ligase
JKJ12_RS05670	COG2249	NAD(P)H dehydrogenase (quinone) activity
JKJ12_RS05675	COG1757	Na H antiporter
JKJ12_RS05695	COG1373	ATPase (AAA superfamily
JKJ12_RS05700	COG1177	transmembrane transport
JKJ12_RS05705	COG1176	ABC-type spermidine putrescine transport system, permease component I
JKJ12_RS05710	COG3842	ATPase activity
JKJ12_RS05715	COG1979	alcohol dehydrogenase
JKJ12_RS05730	COG0739	heme binding
JKJ12_RS05735	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
JKJ12_RS05745	COG0656	L-ascorbic acid biosynthetic process
JKJ12_RS05760	COG2996	Protein conserved in bacteria
JKJ12_RS05765	COG0616	signal peptide processing
JKJ12_RS05770	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JKJ12_RS05775	COG3106	COG3106 Predicted ATPase
JKJ12_RS05780	COG3768	UPF0283 membrane protein
JKJ12_RS05785	COG3041	Addiction module toxin RelE StbE family
JKJ12_RS05795	COG4953	penicillin-binding protein 1C
JKJ12_RS05805	COG0840	transmembrane signaling receptor activity
JKJ12_RS05820	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
JKJ12_RS05825	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JKJ12_RS05845	COG1028	Short-chain dehydrogenase reductase Sdr
JKJ12_RS05855	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JKJ12_RS05905	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JKJ12_RS05910	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JKJ12_RS05940	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JKJ12_RS05955	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
JKJ12_RS05960	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
JKJ12_RS05985	COG1749	Flagellar hook protein flgE
JKJ12_RS05990	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
JKJ12_RS05995	COG4660	Part of a membrane complex involved in electron transport
JKJ12_RS06000	COG4659	FMN binding
JKJ12_RS06005	COG4658	electron transport chain
JKJ12_RS06010	COG4656	Part of a membrane complex involved in electron transport
JKJ12_RS06015	COG2878	Part of a membrane complex involved in electron transport
JKJ12_RS06020	COG4657	Part of a membrane complex involved in electron transport
JKJ12_RS06030	COG0084	hydrolase, TatD family'
JKJ12_RS06045	COG0438	transferase activity, transferring glycosyl groups
JKJ12_RS06050	COG1216	Glycosyl transferase, family 2
JKJ12_RS06050	COG1442	glycosyl transferase family 8
JKJ12_RS06080	COG1215	transferase activity, transferring glycosyl groups
JKJ12_RS06090	COG0473	3-isopropylmalate dehydrogenase activity
JKJ12_RS06090	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
JKJ12_RS06100	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
JKJ12_RS06110	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
JKJ12_RS06180	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JKJ12_RS06190	COG1132	(ABC) transporter
JKJ12_RS06195	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
JKJ12_RS06235	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JKJ12_RS06285	COG2011	ABC-type metal ion transport system permease component
JKJ12_RS06305	COG1464	Belongs to the NlpA lipoprotein family
JKJ12_RS06310	COG0322	excinuclease ABC activity
JKJ12_RS06335	COG0840	transmembrane signaling receptor activity
JKJ12_RS06340	COG0463	Glycosyl transferase, family 2
JKJ12_RS06360	COG0546	phosphoglycolate phosphatase activity
JKJ12_RS06370	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JKJ12_RS06390	COG4804	nuclease activity
JKJ12_RS06395	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
JKJ12_RS06400	COG1192	Involved in chromosome partitioning
JKJ12_RS06420	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JKJ12_RS06425	COG1663	tetraacyldisaccharide 4'-kinase activity
JKJ12_RS06430	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
JKJ12_RS06435	COG0242	peptide deformylase activity
JKJ12_RS06440	COG1598	PFAM Uncharacterised protein family UPF0150
JKJ12_RS06445	COG1724	mRNA binding
JKJ12_RS06485	COG2801	Transposase and inactivated derivatives
JKJ12_RS06500	COG0028	Belongs to the TPP enzyme family
JKJ12_RS06510	COG1088	dTDP-glucose 4,6-dehydratase activity
JKJ12_RS06555	COG0438	transferase activity, transferring glycosyl groups
JKJ12_RS06570	COG0517	IMP dehydrogenase activity
JKJ12_RS06570	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
JKJ12_RS06645	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JKJ12_RS06650	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JKJ12_RS06665	COG0493	'glutamate synthase
JKJ12_RS06670	COG1013	pyruvate-flavodoxin oxidoreductase activity
JKJ12_RS06675	COG0674	pyruvate-flavodoxin oxidoreductase activity
JKJ12_RS06695	COG2814	Major facilitator Superfamily
JKJ12_RS06710	COG4213	ABC transporter substrate-binding protein
JKJ12_RS06730	COG0004	ammonium transporteR
JKJ12_RS06740	COG0534	Mate efflux family protein
JKJ12_RS06750	COG1979	alcohol dehydrogenase
JKJ12_RS06765	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JKJ12_RS06770	COG1373	ATPase (AAA superfamily
JKJ12_RS06775	COG4679	PFAM Phage derived protein Gp49-like (DUF891)
JKJ12_RS06790	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
JKJ12_RS06795	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JKJ12_RS06815	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
JKJ12_RS06820	COG2202	Pas domain
JKJ12_RS06820	COG2200	EAL domain
JKJ12_RS06820	COG2199	diguanylate cyclase activity
JKJ12_RS06835	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JKJ12_RS06835	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JKJ12_RS06845	COG2801	Transposase and inactivated derivatives
JKJ12_RS06860	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JKJ12_RS06880	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
JKJ12_RS06905	COG0284	orotidine-5'-phosphate decarboxylase activity
JKJ12_RS06910	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
JKJ12_RS06920	COG0776	regulation of translation
JKJ12_RS06925	COG1473	amidohydrolase
JKJ12_RS06930	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JKJ12_RS06935	COG2011	ABC-type metal ion transport system permease component
JKJ12_RS06950	COG0539	negative regulation of cytoplasmic translation
JKJ12_RS06960	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JKJ12_RS06960	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JKJ12_RS06965	COG0385	Bile acid
JKJ12_RS06970	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
JKJ12_RS06975	COG1027	Aspartate ammonia-lyase
JKJ12_RS06995	COG0366	Alpha amylase catalytic
JKJ12_RS07010	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JKJ12_RS07025	COG0463	Glycosyl transferase, family 2
JKJ12_RS07045	COG0285	dihydrofolate synthase activity
JKJ12_RS07050	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
JKJ12_RS07090	COG2917	probably involved in intracellular septation
JKJ12_RS07095	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JKJ12_RS07105	COG4145	pantothenate transmembrane transporter activity
JKJ12_RS07125	COG1592	Rubrerythrin
JKJ12_RS07135	COG1368	sulfuric ester hydrolase activity
JKJ12_RS07145	COG0563	adenylate kinase activity
JKJ12_RS07150	COG0326	Molecular chaperone. Has ATPase activity
JKJ12_RS07170	COG0675	Transposase, IS605 OrfB family
JKJ12_RS07175	COG1373	ATPase (AAA superfamily
JKJ12_RS07185	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JKJ12_RS07205	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JKJ12_RS07210	COG1074	ATP-dependent DNA helicase activity
JKJ12_RS07215	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
JKJ12_RS07220	COG0037	tRNA processing
JKJ12_RS07225	COG0589	response to stress
JKJ12_RS07240	COG1739	Uncharacterized protein family UPF0029
JKJ12_RS07255	COG2910	NAD(P)H-binding
JKJ12_RS07260	COG1959	2 iron, 2 sulfur cluster binding
JKJ12_RS07275	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JKJ12_RS07285	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
JKJ12_RS07300	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
JKJ12_RS07305	COG0740	serine-type endopeptidase activity
JKJ12_RS07325	COG2985	domain, Protein
JKJ12_RS07335	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
JKJ12_RS07340	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
JKJ12_RS07345	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JKJ12_RS07350	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
JKJ12_RS07355	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JKJ12_RS07360	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JKJ12_RS07365	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
JKJ12_RS07365	COG0131	Imidazoleglycerol-phosphate dehydratase
JKJ12_RS07370	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
JKJ12_RS07375	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
JKJ12_RS07380	COG0107	imidazoleglycerol-phosphate synthase activity
JKJ12_RS07385	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
JKJ12_RS07385	COG0140	phosphoribosyl-ATP diphosphatase activity
JKJ12_RS07400	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JKJ12_RS07405	COG4286	Uncharacterised protein family (UPF0160)
JKJ12_RS07420	COG0385	Bile acid
JKJ12_RS07425	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JKJ12_RS07455	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
JKJ12_RS07495	COG0167	dihydroorotate dehydrogenase activity
JKJ12_RS07505	COG0308	aminopeptidase N
JKJ12_RS07510	COG0793	Belongs to the peptidase S41A family
JKJ12_RS07515	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
JKJ12_RS07525	COG2816	NAD+ diphosphatase activity
JKJ12_RS07530	COG0492	ferredoxin-NADP+ reductase activity
JKJ12_RS07535	COG1876	peptidase activity
JKJ12_RS07545	COG2176	DNA-directed DNA polymerase activity
JKJ12_RS07550	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JKJ12_RS07565	COG1570	exodeoxyribonuclease VII activity
JKJ12_RS07595	COG1373	ATPase (AAA superfamily
JKJ12_RS07615	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JKJ12_RS07620	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JKJ12_RS07625	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JKJ12_RS07640	COG1199	ATP-dependent helicase activity
JKJ12_RS07645	COG0826	peptidase U32
JKJ12_RS07665	COG0537	adenosine 5'-monophosphoramidase activity
JKJ12_RS07675	COG0488	(ABC) transporter
JKJ12_RS07680	COG1227	inorganic diphosphatase activity
JKJ12_RS07685	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JKJ12_RS07690	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JKJ12_RS07695	COG2233	PERMEase
JKJ12_RS07700	COG0840	transmembrane signaling receptor activity
JKJ12_RS07705	COG1408	metallophosphoesterase
JKJ12_RS07720	COG2195	Cleaves the N-terminal amino acid of tripeptides
JKJ12_RS07730	COG0148	phosphopyruvate hydratase activity
JKJ12_RS07740	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JKJ12_RS07770	COG1643	Atp-dependent helicase
JKJ12_RS07775	COG3263	regulation of cellular component size
JKJ12_RS07790	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
JKJ12_RS07800	COG2217	Heavy metal translocating P-type atpase
JKJ12_RS07820	COG1187	pseudouridine synthase activity
JKJ12_RS07825	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JKJ12_RS07830	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
JKJ12_RS07840	COG0538	isocitrate dehydrogenase activity
JKJ12_RS07880	COG2915	High frequency lysogenization protein hflD homolog
JKJ12_RS07885	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JKJ12_RS07890	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JKJ12_RS07910	COG0438	transferase activity, transferring glycosyl groups
JKJ12_RS07945	COG2894	cell division
JKJ12_RS07960	COG1215	transferase activity, transferring glycosyl groups
JKJ12_RS07975	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
JKJ12_RS07980	COG2326	polyphosphate kinase activity
JKJ12_RS07990	COG2326	polyphosphate kinase activity
JKJ12_RS08000	COG4251	negative regulation of phosphorylation
JKJ12_RS08000	COG5001	Diguanylate cyclase
JKJ12_RS08000	COG3706	GGDEF domain
JKJ12_RS08000	COG2203	Gaf domain
JKJ12_RS08040	COG2948	multi-organism process
JKJ12_RS08055	COG3451	type IV secretory pathway VirB4
JKJ12_RS08070	COG4962	Type ii secretion system protein e
JKJ12_RS08105	COG0346	lactoylglutathione lyase activity
JKJ12_RS08110	COG0534	Mate efflux family protein
JKJ12_RS08155	COG0778	Nitroreductase
JKJ12_RS08195	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JKJ12_RS08200	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JKJ12_RS08205	COG0708	Exodeoxyribonuclease III
JKJ12_RS08210	COG1538	Outer membrane efflux protein
JKJ12_RS08215	COG1091	dTDP-4-dehydrorhamnose reductase activity
JKJ12_RS08220	COG2195	Cleaves the N-terminal amino acid of tripeptides
JKJ12_RS08225	COG0577	efflux transmembrane transporter activity
JKJ12_RS08225	COG1136	(ABC) transporter
JKJ12_RS08230	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JKJ12_RS08235	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
JKJ12_RS08240	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JKJ12_RS08250	COG3041	Addiction module toxin RelE StbE family
JKJ12_RS08260	COG1115	amino acid carrier protein
JKJ12_RS08270	COG2894	cell division
JKJ12_RS08275	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
JKJ12_RS08280	COG0501	Belongs to the peptidase M48B family
JKJ12_RS08300	COG0527	aspartate kinase activity
JKJ12_RS08310	COG0191	fructose-bisphosphate aldolase activity
JKJ12_RS08315	COG0126	phosphoglycerate kinase activity
JKJ12_RS08355	COG0640	Transcriptional regulator
JKJ12_RS08360	COG0446	pyridine nucleotide-disulphide oxidoreductase
JKJ12_RS08365	COG3395	kinase activity
JKJ12_RS08370	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
JKJ12_RS08375	COG2610	gluconate transmembrane transporter activity
JKJ12_RS08395	COG1349	DNA-binding transcription factor activity
JKJ12_RS08420	COG2356	endonuclease I
JKJ12_RS08425	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JKJ12_RS08430	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
JKJ12_RS08430	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
JKJ12_RS08435	COG1611	Belongs to the LOG family
JKJ12_RS08445	COG0450	alkyl hydroperoxide reductase
JKJ12_RS08450	COG1684	flagellar biosynthetic protein fliR
JKJ12_RS08455	COG1987	bacterial-type flagellum assembly
JKJ12_RS08510	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JKJ12_RS08525	COG0252	asparaginase activity
JKJ12_RS08535	COG3620	sequence-specific DNA binding
JKJ12_RS08540	COG4679	PFAM Phage derived protein Gp49-like (DUF891)
JKJ12_RS08600	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JKJ12_RS08615	COG3345	alpha-galactosidase
JKJ12_RS08645	COG2011	ABC-type metal ion transport system permease component
JKJ12_RS08650	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JKJ12_RS08655	COG1464	Belongs to the NlpA lipoprotein family
JKJ12_RS08680	COG1172	Belongs to the binding-protein-dependent transport system permease family
JKJ12_RS08685	COG1129	ABC transporter
JKJ12_RS08695	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
JKJ12_RS08720	COG1132	(ABC) transporter
JKJ12_RS08730	COG1448	Aminotransferase
JKJ12_RS08735	COG0534	Mate efflux family protein
JKJ12_RS08740	COG1126	abc transporter atp-binding protein
JKJ12_RS08745	COG0765	amino acid transport
JKJ12_RS08750	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JKJ12_RS08765	COG3842	ATPase activity
JKJ12_RS08770	COG3833	ABC-type maltose transport systems, permease component
JKJ12_RS08775	COG1175	transmembrane transport
JKJ12_RS08780	COG2182	Extracellular solute-binding protein
JKJ12_RS08795	COG0735	belongs to the Fur family
JKJ12_RS08825	COG1966	Carbon starvation protein
JKJ12_RS08830	COG0156	8-amino-7-oxononanoate synthase activity
JKJ12_RS08835	COG2830	Protein of unknown function (DUF452)
JKJ12_RS08840	COG2226	methyltransferase
JKJ12_RS08870	COG0675	Transposase, IS605 OrfB family
JKJ12_RS08875	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
JKJ12_RS08885	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
JKJ12_RS08890	COG1966	Carbon starvation protein
JKJ12_RS08910	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JKJ12_RS08925	COG0110	maltose O-acetyltransferase activity
JKJ12_RS08930	COG2890	protein-(glutamine-N5) methyltransferase activity
JKJ12_RS08935	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JKJ12_RS08970	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JKJ12_RS09025	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JKJ12_RS09030	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JKJ12_RS09040	COG0617	tRNA 3'-terminal CCA addition
JKJ12_RS09045	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JKJ12_RS09050	COG0193	aminoacyl-tRNA hydrolase activity
JKJ12_RS09055	COG0012	GTP binding
JKJ12_RS09070	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JKJ12_RS09080	COG0277	FAD linked oxidase domain protein
JKJ12_RS09110	COG1119	ATPase activity
JKJ12_RS09120	COG2885	chlorophyll binding
JKJ12_RS09125	COG0823	Involved in the tonB-independent uptake of proteins
JKJ12_RS09140	COG0811	peptide transport
JKJ12_RS09145	COG0824	Thioesterase
JKJ12_RS09155	COG0632	four-way junction helicase activity
JKJ12_RS09160	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
JKJ12_RS09170	COG0803	Belongs to the bacterial solute-binding protein 9 family
JKJ12_RS09175	COG1121	(ABC) transporter
JKJ12_RS09180	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JKJ12_RS09190	COG0697	spore germination
JKJ12_RS09200	COG0741	lytic transglycosylase activity
JKJ12_RS09205	COG0733	neurotransmitter:sodium symporter activity
JKJ12_RS09210	COG0733	neurotransmitter:sodium symporter activity
JKJ12_RS09215	COG0733	neurotransmitter:sodium symporter activity
JKJ12_RS09220	COG1185	polyribonucleotide nucleotidyltransferase activity
JKJ12_RS09230	COG1609	Transcriptional regulator
JKJ12_RS09240	COG4214	carbohydrate transport
JKJ12_RS09250	COG4213	ABC transporter substrate-binding protein
JKJ12_RS09260	COG0835	chemotaxis
JKJ12_RS09270	COG1192	Involved in chromosome partitioning
JKJ12_RS09280	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
JKJ12_RS09285	COG2201	protein-glutamate methylesterase activity
JKJ12_RS09290	COG2198	Histidine kinase
JKJ12_RS09290	COG0784	Response regulator, receiver
JKJ12_RS09290	COG0643	Histidine kinase
JKJ12_RS09295	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
JKJ12_RS09325	COG3098	single-species biofilm formation
JKJ12_RS09330	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JKJ12_RS09375	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JKJ12_RS09405	COG0776	regulation of translation
JKJ12_RS09415	COG2078	PFAM AMMECR1 domain protein
JKJ12_RS09415	COG3885	ferrous iron binding
JKJ12_RS09420	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JKJ12_RS09425	COG1085	galactose-1-phosphate uridylyltransferase
JKJ12_RS09430	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JKJ12_RS09435	COG1609	Transcriptional regulator
JKJ12_RS09440	COG1560	Kdo2-lipid A biosynthetic process
JKJ12_RS09450	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
JKJ12_RS09465	COG2182	Extracellular solute-binding protein
JKJ12_RS09500	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JKJ12_RS09505	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
JKJ12_RS09515	COG0835	chemotaxis
JKJ12_RS09515	COG0784	Response regulator, receiver
JKJ12_RS09545	COG2390	Transcriptional regulator
JKJ12_RS09565	COG3267	Type II secretory pathway component ExeA
JKJ12_RS09565	COG3409	Peptidoglycan-binding domain 1 protein
JKJ12_RS09570	COG0617	tRNA 3'-terminal CCA addition
JKJ12_RS09580	COG1794	racemase activity, acting on amino acids and derivatives
JKJ12_RS09590	COG1968	undecaprenyl-diphosphatase activity
JKJ12_RS09600	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JKJ12_RS09605	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
JKJ12_RS09615	COG1490	D-aminoacyl-tRNA deacylase activity
JKJ12_RS09630	COG4989	oxidoreductase activity
JKJ12_RS09635	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JKJ12_RS09655	COG0778	Nitroreductase
JKJ12_RS09705	COG0622	Phosphoesterase
JKJ12_RS09715	COG2182	Extracellular solute-binding protein
JKJ12_RS09720	COG4580	involved in the transport of maltose and maltodextrins
JKJ12_RS09725	COG1172	Belongs to the binding-protein-dependent transport system permease family
JKJ12_RS09730	COG1172	Belongs to the binding-protein-dependent transport system permease family
JKJ12_RS09735	COG1129	ABC transporter
JKJ12_RS09740	COG1879	ABC-type sugar transport system periplasmic component
JKJ12_RS09750	COG0280	phosphate acetyltransferase
JKJ12_RS09750	COG0857	belongs to the CobB CobQ family
JKJ12_RS09760	COG0235	Class ii aldolase
JKJ12_RS09765	COG1609	Transcriptional regulator
JKJ12_RS09780	COG1748	Saccharopine dehydrogenase
JKJ12_RS09800	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JKJ12_RS09805	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JKJ12_RS09815	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JKJ12_RS09820	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JKJ12_RS09825	COG0416	fatty acid biosynthetic process
JKJ12_RS09830	COG0333	Belongs to the bacterial ribosomal protein bL32 family
JKJ12_RS09850	COG0546	phosphoglycolate phosphatase activity
JKJ12_RS09860	COG1530	ribonuclease E activity
JKJ12_RS09875	COG0483	inositol monophosphate 1-phosphatase activity
JKJ12_RS09900	COG3479	Phenolic acid decarboxylase
JKJ12_RS09930	COG0693	protein deglycase activity
JKJ12_RS09935	COG1067	ATP-dependent peptidase activity
JKJ12_RS09945	COG0729	surface antigen
JKJ12_RS09950	COG0505	Belongs to the CarA family
JKJ12_RS09955	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
JKJ12_RS09960	COG0492	ferredoxin-NADP+ reductase activity
JKJ12_RS09965	COG0386	Belongs to the glutathione peroxidase family
JKJ12_RS09980	COG1652	LysM domain
JKJ12_RS09985	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
JKJ12_RS09990	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JKJ12_RS09995	COG1028	Short-chain dehydrogenase reductase Sdr
JKJ12_RS10000	COG2211	Major facilitator Superfamily
JKJ12_RS10025	COG0497	DNA recombination
JKJ12_RS10030	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JKJ12_RS10040	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
JKJ12_RS10050	COG0195	Participates in both transcription termination and antitermination
JKJ12_RS10055	COG0779	Required for maturation of 30S ribosomal subunits
JKJ12_RS10060	COG1253	flavin adenine dinucleotide binding
JKJ12_RS10075	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JKJ12_RS10080	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JKJ12_RS10085	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JKJ12_RS10100	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
JKJ12_RS10105	COG1534	Rna-binding protein
JKJ12_RS10115	COG0484	heat shock protein binding
JKJ12_RS10125	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
JKJ12_RS10130	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JKJ12_RS10140	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
JKJ12_RS10145	COG1322	Protein conserved in bacteria
JKJ12_RS10150	COG0440	acetolactate synthase activity
JKJ12_RS10155	COG0028	Belongs to the TPP enzyme family
JKJ12_RS10165	COG0440	acetolactate synthase activity
JKJ12_RS10170	COG0028	Belongs to the TPP enzyme family
JKJ12_RS10180	COG0277	FAD linked oxidase domain protein
JKJ12_RS10180	COG0247	lactate metabolic process
JKJ12_RS10230	COG1702	phosphate starvation-inducible protein PhoH
JKJ12_RS10235	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JKJ12_RS10245	COG0815	Transfers the fatty acyl group on membrane lipoproteins
JKJ12_RS10255	COG1376	ErfK ybiS ycfS ynhG family protein
JKJ12_RS10265	COG0495	leucyl-tRNA aminoacylation
JKJ12_RS10280	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JKJ12_RS10285	COG0799	negative regulation of ribosome biogenesis
JKJ12_RS10290	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
JKJ12_RS10295	COG0768	penicillin binding
JKJ12_RS10300	COG0772	Belongs to the SEDS family
JKJ12_RS10305	COG2951	lytic endotransglycosylase activity
JKJ12_RS10310	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JKJ12_RS10315	COG1686	Belongs to the peptidase S11 family
JKJ12_RS10320	COG2921	Belongs to the UPF0250 family
JKJ12_RS10325	COG2949	membrane
JKJ12_RS10330	COG0338	D12 class N6 adenine-specific DNA methyltransferase
JKJ12_RS10340	COG2731	YhcH YjgK YiaL family protein
JKJ12_RS10355	COG1349	DNA-binding transcription factor activity
JKJ12_RS10365	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
JKJ12_RS10375	COG1454	alcohol dehydrogenase
JKJ12_RS10395	COG0360	Binds together with S18 to 16S ribosomal RNA
JKJ12_RS10400	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JKJ12_RS10405	COG0557	exoribonuclease II activity
JKJ12_RS10410	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JKJ12_RS10430	COG2252	PERMEase
JKJ12_RS10435	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JKJ12_RS10440	COG0058	SHG alpha-glucan phosphorylase activity
JKJ12_RS10445	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JKJ12_RS10450	COG0187	DNA topoisomerase II activity
JKJ12_RS10470	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
JKJ12_RS10475	COG0494	nUDIX hydrolase
JKJ12_RS10480	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
JKJ12_RS10485	COG0180	Tryptophanyl-tRNA synthetase
JKJ12_RS10490	COG0546	phosphoglycolate phosphatase activity
JKJ12_RS10495	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JKJ12_RS10510	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JKJ12_RS10525	COG2211	Major facilitator Superfamily
JKJ12_RS10530	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
JKJ12_RS10630	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JKJ12_RS10640	COG1720	tRNA m6t6A37 methyltransferase activity
JKJ12_RS10650	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JKJ12_RS10655	COG0656	L-ascorbic acid biosynthetic process
JKJ12_RS10660	COG0675	Transposase, IS605 OrfB family
JKJ12_RS10665	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JKJ12_RS10670	COG3395	kinase activity
JKJ12_RS10710	COG1538	Outer membrane efflux protein
JKJ12_RS10715	COG1297	OPT oligopeptide transporter protein
JKJ12_RS10720	COG2252	PERMEase
JKJ12_RS10740	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
JKJ12_RS10740	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
JKJ12_RS10765	COG0653	protein targeting
JKJ12_RS10775	COG0688	phosphatidylethanolamine metabolic process
JKJ12_RS10780	COG1053	succinate dehydrogenase
JKJ12_RS10785	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
JKJ12_RS10795	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
JKJ12_RS10800	COG0469	pyruvate kinase activity
JKJ12_RS10830	COG3951	Flagellar rod assembly protein muramidase FlgJ
JKJ12_RS10830	COG1705	Flagellar rod assembly protein muramidase FlgJ
JKJ12_RS10840	COG1086	Polysaccharide biosynthesis protein
JKJ12_RS10845	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JKJ12_RS10850	COG1083	cytidylyl-transferase
JKJ12_RS10870	COG0077	Prephenate dehydratase
JKJ12_RS10870	COG1605	Chorismate mutase
JKJ12_RS10900	COG0730	response to heat
JKJ12_RS10905	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
JKJ12_RS10910	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
JKJ12_RS10915	COG2027	D-alanyl-D-alanine carboxypeptidase
JKJ12_RS10920	COG0436	Aminotransferase
JKJ12_RS10945	COG0473	3-isopropylmalate dehydrogenase activity
JKJ12_RS10955	COG0066	3-isopropylmalate dehydratase activity
JKJ12_RS10965	COG2017	converts alpha-aldose to the beta-anomer
JKJ12_RS10985	COG0795	lipopolysaccharide-transporting ATPase activity
JKJ12_RS10995	COG0675	Transposase, IS605 OrfB family
JKJ12_RS11000	COG0795	lipopolysaccharide-transporting ATPase activity
JKJ12_RS11005	COG0470	DNA polymerase III
JKJ12_RS11010	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JKJ12_RS11015	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JKJ12_RS11025	COG0525	valine-tRNA ligase activity
JKJ12_RS11040	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
JKJ12_RS11045	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
JKJ12_RS11050	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JKJ12_RS11055	COG0196	riboflavin kinase activity
JKJ12_RS11060	COG0268	Binds directly to 16S ribosomal RNA
JKJ12_RS11065	COG2207	Transcriptional regulator
JKJ12_RS11080	COG2226	methyltransferase
JKJ12_RS11105	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
JKJ12_RS11110	COG2089	acid synthase
JKJ12_RS11120	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JKJ12_RS11125	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JKJ12_RS11130	COG1086	Polysaccharide biosynthesis protein
JKJ12_RS11150	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JKJ12_RS11180	COG1944	ATP diphosphatase activity
JKJ12_RS11195	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JKJ12_RS11205	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
JKJ12_RS11210	COG1695	Transcriptional regulator
JKJ12_RS11220	COG3479	Phenolic acid decarboxylase
JKJ12_RS11230	COG1477	protein flavinylation
JKJ12_RS11240	COG0442	prolyl-tRNA aminoacylation
JKJ12_RS11245	COG1706	bacterial-type flagellum-dependent cell motility
JKJ12_RS11250	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
JKJ12_RS11260	COG4787	bacterial-type flagellum-dependent cell motility
JKJ12_RS11265	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
JKJ12_RS11270	COG1558	bacterial-type flagellum-dependent cell motility
JKJ12_RS11275	COG1815	bacterial-type flagellum-dependent cell motility
JKJ12_RS11280	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
JKJ12_RS11335	COG1414	Transcriptional regulator
JKJ12_RS11360	COG1028	Short-chain dehydrogenase reductase Sdr
JKJ12_RS11365	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JKJ12_RS11365	COG0047	phosphoribosylformylglycinamidine synthase activity
JKJ12_RS11400	COG0542	response to heat
JKJ12_RS11415	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JKJ12_RS11420	COG0564	pseudouridine synthase activity
JKJ12_RS11425	COG1373	ATPase (AAA superfamily
JKJ12_RS11440	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
JKJ12_RS11455	COG0220	tRNA (guanine-N7-)-methyltransferase activity
JKJ12_RS11460	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JKJ12_RS11465	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
JKJ12_RS11475	COG0157	Belongs to the NadC ModD family
JKJ12_RS11480	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JKJ12_RS11485	COG0305	Participates in initiation and elongation during chromosome replication
JKJ12_RS11505	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
JKJ12_RS11510	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JKJ12_RS11520	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
JKJ12_RS11535	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
JKJ12_RS11545	COG4942	peptidase
JKJ12_RS11545	COG1388	LysM domain
JKJ12_RS11550	COG1238	metal cluster binding
JKJ12_RS11565	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
JKJ12_RS11570	COG0504	CTP synthase activity
JKJ12_RS11575	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JKJ12_RS11580	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JKJ12_RS11585	COG1381	Involved in DNA repair and RecF pathway recombination
JKJ12_RS11595	COG0571	ribonuclease III activity
JKJ12_RS11610	COG0758	DNA mediated transformation
JKJ12_RS11630	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JKJ12_RS11695	COG1674	ftsk spoiiie
JKJ12_RS11795	COG1233	COG1233 Phytoene dehydrogenase and related
JKJ12_RS11975	COG2356	endonuclease I
JKJ12_RS12000	COG1475	DNA binding
JKJ12_RS12015	COG0629	single-stranded DNA binding
JKJ12_RS12020	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JKJ12_RS12080	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
JKJ12_RS12200	COG3041	Addiction module toxin RelE StbE family
JKJ12_RS12235	COG0084	hydrolase, TatD family'
JKJ12_RS12245	COG0740	serine-type endopeptidase activity
JKJ12_RS12265	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
JKJ12_RS12335	COG4974	Belongs to the 'phage' integrase family
JKJ12_RS12350	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
JKJ12_RS12360	COG4213	ABC transporter substrate-binding protein
JKJ12_RS12365	COG0840	transmembrane signaling receptor activity
JKJ12_RS12390	COG1192	Involved in chromosome partitioning