locus-tag class description SDZ_RS00040 PF01501 Glycosyl transferase family 8 SDZ_RS00045 PF01501 Glycosyl transferase family 8 SDZ_RS00045 PF00535 Glycosyl transferase family 2 SDZ_RS00060 PF01370 NAD dependent epimerase/dehydratase family SDZ_RS00080 PF02348 Cytidylyltransferase SDZ_RS00085 PF00682 HMGL-like SDZ_RS00085 PF08502 LeuA allosteric (dimerisation) domain SDZ_RS00125 PF09820 Predicted AAA-ATPase SDZ_RS00125 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS00175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SDZ_RS00175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SDZ_RS00195 PF00589 Phage integrase family SDZ_RS00210 PF00589 Phage integrase family SDZ_RS00210 PF02899 Phage integrase, N-terminal SAM-like domain SDZ_RS00260 PF01695 IstB-like ATP binding protein SDZ_RS00380 PF00005 ABC transporter SDZ_RS00380 PF00664 ABC transporter transmembrane region SDZ_RS00385 PF02397 Bacterial sugar transferase SDZ_RS00390 PF00535 Glycosyl transferase family 2 SDZ_RS00395 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SDZ_RS00400 PF05523 WxcM-like, C-terminal SDZ_RS00410 PF00483 Nucleotidyl transferase SDZ_RS00415 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SDZ_RS00420 PF16363 GDP-mannose 4,6 dehydratase SDZ_RS00435 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system SDZ_RS00445 PF01844 HNH endonuclease SDZ_RS00475 PF07282 Putative transposase DNA-binding domain SDZ_RS00475 PF01385 Probable transposase SDZ_RS00475 PF12323 Helix-turn-helix domain SDZ_RS00495 PF13401 AAA domain SDZ_RS00495 PF01471 Putative peptidoglycan binding domain SDZ_RS00515 PF01695 IstB-like ATP binding protein SDZ_RS00520 PF01695 IstB-like ATP binding protein SDZ_RS00545 PF11855 Protein of unknown function (DUF3375) SDZ_RS00555 PF00005 ABC transporter SDZ_RS00570 PF00270 DEAD/DEAH box helicase SDZ_RS00570 PF17191 RecG wedge domain SDZ_RS00570 PF13749 Putative ATP-dependent DNA helicase recG C-terminal SDZ_RS00585 PF04317 YcjX-like family, DUF463 SDZ_RS00590 PF05128 Domain of unknown function (DUF697) SDZ_RS00595 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS00595 PF09820 Predicted AAA-ATPase SDZ_RS00600 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS00600 PF09820 Predicted AAA-ATPase SDZ_RS00610 PF00005 ABC transporter SDZ_RS00610 PF09383 NIL domain SDZ_RS00615 PF00528 Binding-protein-dependent transport system inner membrane component SDZ_RS00620 PF05973 Phage derived protein Gp49-like (DUF891) SDZ_RS00625 PF01381 Helix-turn-helix SDZ_RS00635 PF03180 NLPA lipoprotein SDZ_RS00640 PF01541 GIY-YIG catalytic domain SDZ_RS00640 PF02151 UvrB/uvrC motif SDZ_RS00640 PF08459 UvrC Helix-hairpin-helix N-terminal SDZ_RS00645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDZ_RS00645 PF00672 HAMP domain SDZ_RS00645 PF02743 Cache domain SDZ_RS00650 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SDZ_RS00650 PF00535 Glycosyl transferase family 2 SDZ_RS00655 PF00535 Glycosyl transferase family 2 SDZ_RS00670 PF13419 Haloacid dehalogenase-like hydrolase SDZ_RS00675 PF00156 Phosphoribosyl transferase domain SDZ_RS00680 PF12170 DNA polymerase III tau subunit V interacting with alpha SDZ_RS00680 PF12169 DNA polymerase III subunits gamma and tau domain III SDZ_RS00690 PF13416 Bacterial extracellular solute-binding protein SDZ_RS00715 PF13614 AAA domain SDZ_RS00725 PF01509 TruB family pseudouridylate synthase (N terminal domain) SDZ_RS00725 PF09157 Pseudouridine synthase II TruB, C-terminal SDZ_RS00725 PF16198 tRNA pseudouridylate synthase B C-terminal domain SDZ_RS00730 PF02606 Tetraacyldisaccharide-1-P 4'-kinase SDZ_RS00735 PF02348 Cytidylyltransferase SDZ_RS00740 PF01327 Polypeptide deformylase SDZ_RS00745 PF00860 Permease family SDZ_RS00750 PF02915 Rubrerythrin SDZ_RS00760 PF00083 Sugar (and other) transporter SDZ_RS00760 PF07690 Major Facilitator Superfamily SDZ_RS00765 PF07690 Major Facilitator Superfamily SDZ_RS00770 PF00474 Sodium:solute symporter family SDZ_RS00780 PF00483 Nucleotidyl transferase SDZ_RS00785 PF04279 Intracellular septation protein A SDZ_RS00820 PF00999 Sodium/hydrogen exchanger family SDZ_RS00825 PF17848 Acetyl-coA carboxylase zinc finger domain SDZ_RS00825 PF01039 Carboxyl transferase domain SDZ_RS00830 PF02875 Mur ligase family, glutamate ligase domain SDZ_RS00830 PF08245 Mur ligase middle domain SDZ_RS00840 PF01784 NIF3 (NGG1p interacting factor 3) SDZ_RS00845 PF01227 GTP cyclohydrolase I SDZ_RS00850 PF00535 Glycosyl transferase family 2 SDZ_RS00860 PF01416 tRNA pseudouridine synthase SDZ_RS00865 PF01066 CDP-alcohol phosphatidyltransferase SDZ_RS00885 PF00128 Alpha amylase, catalytic domain SDZ_RS00890 PF04358 DsrC like protein SDZ_RS00905 PF10415 Fumarase C C-terminus SDZ_RS00905 PF00206 Lyase SDZ_RS00910 PF03605 Anaerobic c4-dicarboxylate membrane transporter SDZ_RS00915 PF01758 Sodium Bile acid symporter family SDZ_RS00920 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SDZ_RS00920 PF00925 GTP cyclohydrolase II SDZ_RS00925 PF02224 Cytidylate kinase SDZ_RS00930 PF00575 S1 RNA binding domain SDZ_RS00940 PF03180 NLPA lipoprotein SDZ_RS00945 PF00528 Binding-protein-dependent transport system inner membrane component SDZ_RS00950 PF00005 ABC transporter SDZ_RS00950 PF09383 NIL domain SDZ_RS00955 PF07687 Peptidase dimerisation domain SDZ_RS00955 PF01546 Peptidase family M20/M25/M40 SDZ_RS00960 PF00216 Bacterial DNA-binding protein SDZ_RS00970 PF18073 Rubredoxin metal binding domain SDZ_RS00975 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SDZ_RS00990 PF06526 Protein of unknown function (DUF1107) SDZ_RS01005 PF05175 Methyltransferase small domain SDZ_RS01010 PF01264 Chorismate synthase SDZ_RS01025 PF02903 Alpha amylase, N-terminal ig-like domain SDZ_RS01025 PF00128 Alpha amylase, catalytic domain SDZ_RS01030 PF00270 DEAD/DEAH box helicase SDZ_RS01030 PF02559 CarD-like/TRCF domain SDZ_RS01030 PF00271 Helicase conserved C-terminal domain SDZ_RS01030 PF03461 TRCF domain SDZ_RS01030 PF17757 UvrB interaction domain SDZ_RS01045 PF01588 Putative tRNA binding domain SDZ_RS01045 PF09334 tRNA synthetases class I (M) SDZ_RS01060 PF13635 Domain of unknown function (DUF4143) SDZ_RS01060 PF13173 AAA domain SDZ_RS01070 PF00990 Diguanylate cyclase, GGDEF domain SDZ_RS01070 PF00563 EAL domain SDZ_RS01070 PF13426 PAS domain SDZ_RS01075 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ SDZ_RS01095 PF00474 Sodium:solute symporter family SDZ_RS01100 PF02540 NAD synthase SDZ_RS01105 PF00128 Alpha amylase, catalytic domain SDZ_RS01105 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SDZ_RS01110 PF04055 Radical SAM superfamily SDZ_RS01115 PF02901 Pyruvate formate lyase-like SDZ_RS01115 PF01228 Glycine radical SDZ_RS01120 PF06874 Firmicute fructose-1,6-bisphosphatase SDZ_RS01125 PF00465 Iron-containing alcohol dehydrogenase SDZ_RS01130 PF13416 Bacterial extracellular solute-binding protein SDZ_RS01135 PF01554 MatE SDZ_RS01140 PF00543 Nitrogen regulatory protein P-II SDZ_RS01145 PF00909 Ammonium Transporter Family SDZ_RS01165 PF13407 Periplasmic binding protein domain SDZ_RS01180 PF07690 Major Facilitator Superfamily SDZ_RS01200 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SDZ_RS01200 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SDZ_RS01205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SDZ_RS01210 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDZ_RS01210 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SDZ_RS01225 PF00027 Cyclic nucleotide-binding domain SDZ_RS01225 PF13545 Crp-like helix-turn-helix domain SDZ_RS01230 PF07977 FabA-like domain SDZ_RS01255 PF00929 Exonuclease SDZ_RS01275 PF00912 Transglycosylase SDZ_RS01275 PF06832 Penicillin-Binding Protein C-terminus Family SDZ_RS01275 PF00905 Penicillin binding protein transpeptidase domain SDZ_RS01285 PF05191 Adenylate kinase, active site lid SDZ_RS01290 PF00183 Hsp90 protein SDZ_RS01290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDZ_RS01295 PF02132 RecR protein SDZ_RS01295 PF13662 Toprim domain SDZ_RS01300 PF02575 YbaB/EbfC DNA-binding family SDZ_RS01315 PF00809 Pterin binding enzyme SDZ_RS01330 PF09827 CRISPR associated protein Cas2 SDZ_RS01340 PF18541 RuvC endonuclease subdomain 3 SDZ_RS01340 PF18470 Cas9 alpha-helical lobe domain SDZ_RS01340 PF13395 HNH endonuclease SDZ_RS01390 PF02899 Phage integrase, N-terminal SAM-like domain SDZ_RS01390 PF00589 Phage integrase family SDZ_RS01395 PF13542 Helix-turn-helix domain of transposase family ISL3 SDZ_RS01395 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 SDZ_RS01395 PF01610 Transposase SDZ_RS01410 PF00216 Bacterial DNA-binding protein SDZ_RS01420 PF13538 UvrD-like helicase C-terminal domain SDZ_RS01425 PF13361 UvrD-like helicase C-terminal domain SDZ_RS01425 PF00580 UvrD/REP helicase N-terminal domain SDZ_RS01425 PF12705 PD-(D/E)XK nuclease superfamily SDZ_RS01430 PF17946 RecC C-terminal domain SDZ_RS01445 PF01171 PP-loop family SDZ_RS01450 PF00582 Universal stress protein family SDZ_RS01470 PF09186 Domain of unknown function (DUF1949) SDZ_RS01470 PF01205 Uncharacterized protein family UPF0029 SDZ_RS01475 PF02535 ZIP Zinc transporter SDZ_RS01490 PF13145 PPIC-type PPIASE domain SDZ_RS01500 PF02190 ATP-dependent protease La (LON) substrate-binding domain SDZ_RS01500 PF05362 Lon protease (S16) C-terminal proteolytic domain SDZ_RS01500 PF00004 ATPase family associated with various cellular activities (AAA) SDZ_RS01515 PF07724 AAA domain (Cdc48 subfamily) SDZ_RS01515 PF10431 C-terminal, D2-small domain, of ClpB protein SDZ_RS01515 PF06689 ClpX C4-type zinc finger SDZ_RS01520 PF00574 Clp protease SDZ_RS01525 PF05698 Bacterial trigger factor protein (TF) C-terminus SDZ_RS01525 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SDZ_RS01525 PF05697 Bacterial trigger factor protein (TF) SDZ_RS01540 PF06826 Predicted Permease Membrane Region SDZ_RS01540 PF02080 TrkA-C domain SDZ_RS01550 PF06450 Bacterial Na+/H+ antiporter B (NhaB) SDZ_RS01560 PF02600 Disulfide bond formation protein DsbB SDZ_RS01565 PF00497 Bacterial extracellular solute-binding proteins, family 3 SDZ_RS01570 PF08029 HisG, C-terminal domain SDZ_RS01570 PF01634 ATP phosphoribosyltransferase SDZ_RS01575 PF00815 Histidinol dehydrogenase SDZ_RS01580 PF00155 Aminotransferase class I and II SDZ_RS01585 PF00475 Imidazoleglycerol-phosphate dehydratase SDZ_RS01590 PF00117 Glutamine amidotransferase class-I SDZ_RS01595 PF00977 Histidine biosynthesis protein SDZ_RS01600 PF00977 Histidine biosynthesis protein SDZ_RS01605 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SDZ_RS01605 PF01502 Phosphoribosyl-AMP cyclohydrolase SDZ_RS01610 PF03741 Integral membrane protein TerC family SDZ_RS01620 PF01207 Dihydrouridine synthase (Dus) SDZ_RS01625 PF03690 Uncharacterised protein family (UPF0160) SDZ_RS01640 PF01758 Sodium Bile acid symporter family SDZ_RS01645 PF01546 Peptidase family M20/M25/M40 SDZ_RS01645 PF07687 Peptidase dimerisation domain SDZ_RS01665 PF00202 Aminotransferase class-III SDZ_RS01670 PF14698 Argininosuccinate lyase C-terminal SDZ_RS01670 PF00206 Lyase SDZ_RS01670 PF00583 Acetyltransferase (GNAT) family SDZ_RS01675 PF00696 Amino acid kinase family SDZ_RS01680 PF02774 Semialdehyde dehydrogenase, dimerisation domain SDZ_RS01680 PF01118 Semialdehyde dehydrogenase, NAD binding domain SDZ_RS01685 PF03411 Penicillin-insensitive murein endopeptidase SDZ_RS01725 PF01180 Dihydroorotate dehydrogenase SDZ_RS01735 PF01433 Peptidase family M1 domain SDZ_RS01735 PF11940 Domain of unknown function (DUF3458) Ig-like fold SDZ_RS01735 PF17432 Domain of unknown function (DUF3458_C) ARM repeats SDZ_RS01740 PF00595 PDZ domain SDZ_RS01740 PF11818 C-terminal domain of tail specific protease (DUF3340) SDZ_RS01740 PF03572 Peptidase family S41 SDZ_RS01740 PF17804 Tail specific protease N-terminal domain SDZ_RS01745 PF17516 ProQ C-terminal domain SDZ_RS01745 PF04352 ProQ/FINO family SDZ_RS01760 PF09297 NADH pyrophosphatase zinc ribbon domain SDZ_RS01760 PF00293 NUDIX domain SDZ_RS01760 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain SDZ_RS01765 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDZ_RS01770 PF02557 D-alanyl-D-alanine carboxypeptidase SDZ_RS01775 PF01741 Large-conductance mechanosensitive channel, MscL SDZ_RS01780 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SDZ_RS01780 PF14579 Helix-hairpin-helix motif SDZ_RS01780 PF14480 DNA polymerase III polC-type N-terminus I SDZ_RS01780 PF00929 Exonuclease SDZ_RS01780 PF02811 PHP domain SDZ_RS01780 PF11490 DNA polymerase III polC-type N-terminus II SDZ_RS01780 PF07733 Bacterial DNA polymerase III alpha NTPase domain SDZ_RS01785 PF00291 Pyridoxal-phosphate dependent enzyme SDZ_RS01790 PF00375 Sodium:dicarboxylate symporter family SDZ_RS01800 PF13742 OB-fold nucleic acid binding domain SDZ_RS01800 PF02601 Exonuclease VII, large subunit SDZ_RS01840 PF00669 Bacterial flagellin N-terminal helical region SDZ_RS01840 PF00700 Bacterial flagellin C-terminal helical region SDZ_RS01840 PF07196 Flagellin hook IN motif SDZ_RS01845 PF00669 Bacterial flagellin N-terminal helical region SDZ_RS01845 PF00700 Bacterial flagellin C-terminal helical region SDZ_RS01845 PF07196 Flagellin hook IN motif SDZ_RS01850 PF00669 Bacterial flagellin N-terminal helical region SDZ_RS01850 PF07196 Flagellin hook IN motif SDZ_RS01850 PF00700 Bacterial flagellin C-terminal helical region SDZ_RS01860 PF00814 Glycoprotease family SDZ_RS01865 PF13307 Helicase C-terminal domain SDZ_RS01865 PF06733 DEAD_2 SDZ_RS01870 PF01136 Peptidase family U32 SDZ_RS01870 PF12392 Collagenase SDZ_RS01890 PF01230 HIT domain SDZ_RS01900 PF00005 ABC transporter SDZ_RS01900 PF12848 ABC transporter SDZ_RS01905 PF02833 DHHA2 domain SDZ_RS01905 PF01368 DHH family SDZ_RS01910 PF18693 TRAM domain SDZ_RS01910 PF04055 Radical SAM superfamily SDZ_RS01910 PF00919 Uncharacterized protein family UPF0004 SDZ_RS01915 PF00156 Phosphoribosyl transferase domain SDZ_RS01920 PF00860 Permease family SDZ_RS01930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDZ_RS01930 PF00672 HAMP domain SDZ_RS01930 PF12729 Four helix bundle sensory module for signal transduction SDZ_RS01935 PF00149 Calcineurin-like phosphoesterase SDZ_RS01955 PF07282 Putative transposase DNA-binding domain SDZ_RS01955 PF01385 Probable transposase SDZ_RS01955 PF12323 Helix-turn-helix domain SDZ_RS01960 PF07687 Peptidase dimerisation domain SDZ_RS01960 PF01546 Peptidase family M20/M25/M40 SDZ_RS01965 PF03806 AbgT putative transporter family SDZ_RS01970 PF03952 Enolase, N-terminal domain SDZ_RS01970 PF00113 Enolase, C-terminal TIM barrel domain SDZ_RS01980 PF02774 Semialdehyde dehydrogenase, dimerisation domain SDZ_RS01980 PF01118 Semialdehyde dehydrogenase, NAD binding domain SDZ_RS01985 PF00216 Bacterial DNA-binding protein SDZ_RS02010 PF00271 Helicase conserved C-terminal domain SDZ_RS02010 PF00270 DEAD/DEAH box helicase SDZ_RS02010 PF11898 Domain of unknown function (DUF3418) SDZ_RS02010 PF04408 Helicase associated domain (HA2) SDZ_RS02010 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold SDZ_RS02015 PF03471 Transporter associated domain SDZ_RS02015 PF00999 Sodium/hydrogen exchanger family SDZ_RS02015 PF02080 TrkA-C domain SDZ_RS02025 PF01661 Macro domain SDZ_RS02030 PF00004 ATPase family associated with various cellular activities (AAA) SDZ_RS02030 PF05362 Lon protease (S16) C-terminal proteolytic domain SDZ_RS02030 PF02190 ATP-dependent protease La (LON) substrate-binding domain SDZ_RS02040 PF00403 Heavy-metal-associated domain SDZ_RS02055 PF01479 S4 domain SDZ_RS02055 PF00849 RNA pseudouridylate synthase SDZ_RS02060 PF00109 Beta-ketoacyl synthase, N-terminal domain SDZ_RS02060 PF02801 Beta-ketoacyl synthase, C-terminal domain SDZ_RS02065 PF01176 Translation initiation factor 1A / IF-1 SDZ_RS02070 PF01844 HNH endonuclease SDZ_RS02090 PF00180 Isocitrate/isopropylmalate dehydrogenase SDZ_RS02110 PF00293 NUDIX domain SDZ_RS02120 PF04356 Protein of unknown function (DUF489) SDZ_RS02125 PF08328 Adenylosuccinate lyase C-terminal SDZ_RS02125 PF00206 Lyase SDZ_RS02130 PF01717 Cobalamin-independent synthase, Catalytic domain SDZ_RS02150 PF01699 Sodium/calcium exchanger protein SDZ_RS02155 PF13460 NAD(P)H-binding SDZ_RS02160 PF02082 Transcriptional regulator SDZ_RS02165 PF13407 Periplasmic binding protein domain SDZ_RS02170 PF01238 Phosphomannose isomerase type I SDZ_RS02185 PF04041 beta-1,4-mannooligosaccharide phosphorylase SDZ_RS02190 PF04041 beta-1,4-mannooligosaccharide phosphorylase SDZ_RS02195 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SDZ_RS02195 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SDZ_RS02195 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SDZ_RS02195 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SDZ_RS02200 PF00356 Bacterial regulatory proteins, lacI family SDZ_RS02205 PF00005 ABC transporter SDZ_RS02205 PF17912 MalK OB fold domain SDZ_RS02205 PF03459 TOBE domain SDZ_RS02220 PF00528 Binding-protein-dependent transport system inner membrane component SDZ_RS02225 PF00528 Binding-protein-dependent transport system inner membrane component SDZ_RS02230 PF00793 DAHP synthetase I family SDZ_RS02250 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ SDZ_RS02280 PF13439 Glycosyltransferase Family 4 SDZ_RS02280 PF00534 Glycosyl transferases group 1 SDZ_RS02315 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SDZ_RS02320 PF03170 Bacterial cellulose synthase subunit SDZ_RS02320 PF07238 PilZ domain SDZ_RS02320 PF00535 Glycosyl transferase family 2 SDZ_RS02320 PF03552 Cellulose synthase SDZ_RS02330 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) SDZ_RS02340 PF01270 Glycosyl hydrolases family 8 SDZ_RS02345 PF03976 Polyphosphate kinase 2 (PPK2) SDZ_RS02355 PF00563 EAL domain SDZ_RS02355 PF00990 Diguanylate cyclase, GGDEF domain SDZ_RS02355 PF03707 Bacterial signalling protein N terminal repeat SDZ_RS02410 PF03743 Bacterial conjugation TrbI-like protein SDZ_RS02425 PF03135 CagE, TrbE, VirB family, component of type IV transporter system SDZ_RS02440 PF00437 Type II/IV secretion system protein SDZ_RS02460 PF00149 Calcineurin-like phosphoesterase SDZ_RS02480 PF01613 Flavin reductase like domain SDZ_RS02515 PF00149 Calcineurin-like phosphoesterase SDZ_RS02595 PF01434 Peptidase family M41 SDZ_RS02595 PF00004 ATPase family associated with various cellular activities (AAA) SDZ_RS02595 PF17862 AAA+ lid domain SDZ_RS02605 PF17854 FtsK alpha domain SDZ_RS02605 PF09397 Ftsk gamma domain SDZ_RS02605 PF01580 FtsK/SpoIIIE family SDZ_RS02620 PF00574 Clp protease SDZ_RS02630 PF01026 TatD related DNase SDZ_RS02645 PF01844 HNH endonuclease SDZ_RS02650 PF09820 Predicted AAA-ATPase SDZ_RS02650 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS02655 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS02655 PF09820 Predicted AAA-ATPase SDZ_RS02660 PF09820 Predicted AAA-ATPase SDZ_RS02660 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS02665 PF00990 Diguanylate cyclase, GGDEF domain SDZ_RS02675 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS02675 PF09820 Predicted AAA-ATPase SDZ_RS02700 PF04231 Endonuclease I SDZ_RS02705 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SDZ_RS02705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SDZ_RS02715 PF12729 Four helix bundle sensory module for signal transduction SDZ_RS02715 PF00672 HAMP domain SDZ_RS02715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDZ_RS02725 PF00872 Transposase, Mutator family SDZ_RS02745 PF04231 Endonuclease I SDZ_RS02760 PF01867 CRISPR associated protein Cas1 SDZ_RS02765 PF09827 CRISPR associated protein Cas2 SDZ_RS02770 PF09659 CRISPR-associated protein (Cas_Csm6) SDZ_RS02775 PF18211 Csm1 subunit domain B SDZ_RS02780 PF03750 Csm2 Type III-A SDZ_RS02785 PF03787 RAMP superfamily SDZ_RS02790 PF17953 CRISPR Csm4 C-terminal domain SDZ_RS02795 PF03787 RAMP superfamily SDZ_RS02825 PF02954 Bacterial regulatory protein, Fis family SDZ_RS02825 PF00158 Sigma-54 interaction domain SDZ_RS02830 PF05970 PIF1-like helicase SDZ_RS02830 PF14493 Helix-turn-helix domain SDZ_RS02835 PF10040 CRISPR-associated endoribonuclease Cas6 SDZ_RS02860 PF13407 Periplasmic binding protein domain SDZ_RS02870 PF09820 Predicted AAA-ATPase SDZ_RS02870 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS02895 PF01381 Helix-turn-helix SDZ_RS02915 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB SDZ_RS02915 PF08479 POTRA domain, ShlB-type SDZ_RS02935 PF01420 Type I restriction modification DNA specificity domain SDZ_RS02940 PF18766 SWI2/SNF2 ATPase SDZ_RS02940 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SDZ_RS02940 PF12008 Type I restriction and modification enzyme - subunit R C terminal SDZ_RS02950 PF12161 HsdM N-terminal domain SDZ_RS02950 PF02384 N-6 DNA Methylase SDZ_RS02960 PF00239 Resolvase, N terminal domain SDZ_RS02960 PF02796 Helix-turn-helix domain of resolvase SDZ_RS02975 PF01434 Peptidase family M41 SDZ_RS02975 PF00004 ATPase family associated with various cellular activities (AAA) SDZ_RS02975 PF17862 AAA+ lid domain SDZ_RS02990 PF07690 Major Facilitator Superfamily SDZ_RS03005 PF12705 PD-(D/E)XK nuclease superfamily SDZ_RS03010 PF13361 UvrD-like helicase C-terminal domain SDZ_RS03010 PF00580 UvrD/REP helicase N-terminal domain SDZ_RS03010 PF12705 PD-(D/E)XK nuclease superfamily SDZ_RS03015 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS03015 PF09820 Predicted AAA-ATPase SDZ_RS03055 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS03055 PF09820 Predicted AAA-ATPase SDZ_RS03080 PF00149 Calcineurin-like phosphoesterase SDZ_RS03130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SDZ_RS03130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SDZ_RS03135 PF00793 DAHP synthetase I family SDZ_RS03140 PF03372 Endonuclease/Exonuclease/phosphatase family SDZ_RS03145 PF02321 Outer membrane efflux protein SDZ_RS03150 PF04321 RmlD substrate binding domain SDZ_RS03155 PF07687 Peptidase dimerisation domain SDZ_RS03155 PF01546 Peptidase family M20/M25/M40 SDZ_RS03160 PF12704 MacB-like periplasmic core domain SDZ_RS03160 PF00005 ABC transporter SDZ_RS03160 PF02687 FtsX-like permease family SDZ_RS03165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SDZ_RS03170 PF10672 S-adenosylmethionine-dependent methyltransferase SDZ_RS03170 PF17785 PUA-like domain SDZ_RS03175 PF00753 Metallo-beta-lactamase superfamily SDZ_RS03200 PF01235 Sodium:alanine symporter family SDZ_RS03210 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SDZ_RS03215 PF03776 Septum formation topological specificity factor MinE SDZ_RS03220 PF01435 Peptidase family M48 SDZ_RS03220 PF07720 Tetratricopeptide repeat SDZ_RS03240 PF00696 Amino acid kinase family SDZ_RS03240 PF01842 ACT domain SDZ_RS03245 PF07195 Flagellar hook-associated protein 2 C-terminus SDZ_RS03245 PF02465 Flagellar hook-associated protein 2 N-terminus SDZ_RS03245 PF07196 Flagellin hook IN motif SDZ_RS03250 PF01116 Fructose-bisphosphate aldolase class-II SDZ_RS03255 PF00162 Phosphoglycerate kinase SDZ_RS03270 PF00456 Transketolase, thiamine diphosphate binding domain SDZ_RS03270 PF02779 Transketolase, pyrimidine binding domain SDZ_RS03270 PF02780 Transketolase, C-terminal domain SDZ_RS03275 PF00923 Transaldolase/Fructose-6-phosphate aldolase SDZ_RS03280 PF02772 S-adenosylmethionine synthetase, central domain SDZ_RS03280 PF02773 S-adenosylmethionine synthetase, C-terminal domain SDZ_RS03280 PF00438 S-adenosylmethionine synthetase, N-terminal domain SDZ_RS03290 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDZ_RS03290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SDZ_RS03345 PF01867 CRISPR associated protein Cas1 SDZ_RS03390 PF09659 CRISPR-associated protein (Cas_Csm6) SDZ_RS03395 PF00158 Sigma-54 interaction domain SDZ_RS03395 PF02954 Bacterial regulatory protein, Fis family SDZ_RS03395 PF01590 GAF domain SDZ_RS03410 PF04166 Pyridoxal phosphate biosynthetic protein PdxA SDZ_RS03450 PF04231 Endonuclease I SDZ_RS03455 PF04452 RNA methyltransferase SDZ_RS03460 PF14489 QueF-like protein SDZ_RS03460 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term SDZ_RS03465 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases SDZ_RS03465 PF11892 Domain of unknown function (DUF3412) SDZ_RS03465 PF03641 Possible lysine decarboxylase SDZ_RS03480 PF01311 Bacterial export proteins, family 1 SDZ_RS03485 PF01313 Bacterial export proteins, family 3 SDZ_RS03490 PF00813 FliP family SDZ_RS03500 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SDZ_RS03505 PF02154 Flagellar motor switch protein FliM SDZ_RS03505 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SDZ_RS03530 PF18269 T3SS EscN ATPase C-terminal domain SDZ_RS03530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SDZ_RS03540 PF01706 FliG C-terminal domain SDZ_RS03540 PF14842 FliG N-terminal domain SDZ_RS03540 PF14841 FliG middle domain SDZ_RS03545 PF01514 Secretory protein of YscJ/FliF family SDZ_RS03545 PF08345 Flagellar M-ring protein C-terminal SDZ_RS03550 PF02049 Flagellar hook-basal body complex protein FliE SDZ_RS03555 PF00710 Asparaginase, N-terminal SDZ_RS03555 PF17763 Glutaminase/Asparaginase C-terminal domain SDZ_RS03570 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SDZ_RS03575 PF00579 tRNA synthetases class I (W and Y) SDZ_RS03580 PF03702 Anhydro-N-acetylmuramic acid kinase SDZ_RS03590 PF16875 Glycosyl hydrolase family 36 N-terminal domain SDZ_RS03590 PF16874 Glycosyl hydrolase family 36 C-terminal domain SDZ_RS03595 PF02464 Competence-damaged protein SDZ_RS03625 PF01699 Sodium/calcium exchanger protein SDZ_RS03630 PF13460 NAD(P)H-binding SDZ_RS03635 PF02082 Transcriptional regulator SDZ_RS03640 PF02653 Branched-chain amino acid transport system / permease component SDZ_RS03645 PF00005 ABC transporter SDZ_RS03665 PF04608 Phosphatidylglycerophosphatase A SDZ_RS03690 PF00005 ABC transporter SDZ_RS03690 PF00664 ABC transporter transmembrane region SDZ_RS03700 PF00155 Aminotransferase class I and II SDZ_RS03705 PF01554 MatE SDZ_RS03710 PF00005 ABC transporter SDZ_RS03715 PF00528 Binding-protein-dependent transport system inner membrane component SDZ_RS03720 PF00497 Bacterial extracellular solute-binding proteins, family 3 SDZ_RS03735 PF00005 ABC transporter SDZ_RS03735 PF08402 TOBE domain SDZ_RS03740 PF00528 Binding-protein-dependent transport system inner membrane component SDZ_RS03745 PF14785 Maltose transport system permease protein MalF P2 domain SDZ_RS03745 PF00528 Binding-protein-dependent transport system inner membrane component SDZ_RS03750 PF01547 Bacterial extracellular solute-binding protein SDZ_RS03755 PF12833 Helix-turn-helix domain SDZ_RS03755 PF10114 Sensory domain found in PocR SDZ_RS03765 PF01475 Ferric uptake regulator family SDZ_RS03780 PF02445 Quinolinate synthetase A protein SDZ_RS03795 PF13722 5TM C-terminal transporter carbon starvation CstA SDZ_RS03795 PF02554 Carbon starvation protein CstA SDZ_RS03805 PF07282 Putative transposase DNA-binding domain SDZ_RS03805 PF12323 Helix-turn-helix domain SDZ_RS03805 PF01385 Probable transposase SDZ_RS03810 PF00155 Aminotransferase class I and II SDZ_RS03815 PF04301 Protein of unknown function (DUF452) SDZ_RS03815 PF08241 Methyltransferase domain SDZ_RS03835 PF01259 SAICAR synthetase SDZ_RS03840 PF00202 Aminotransferase class-III SDZ_RS03850 PF02554 Carbon starvation protein CstA SDZ_RS03855 PF00700 Bacterial flagellin C-terminal helical region SDZ_RS03855 PF00669 Bacterial flagellin N-terminal helical region SDZ_RS03870 PF00749 tRNA synthetases class I (E and Q), catalytic domain SDZ_RS03870 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain SDZ_RS03880 PF00132 Bacterial transferase hexapeptide (six repeats) SDZ_RS03890 PF17827 PrmC N-terminal domain SDZ_RS03890 PF13847 Methyltransferase domain SDZ_RS03895 PF03462 PCRF domain SDZ_RS03895 PF00472 RF-1 domain SDZ_RS03940 PF00005 ABC transporter SDZ_RS03940 PF09383 NIL domain SDZ_RS03995 PF12323 Helix-turn-helix domain SDZ_RS03995 PF07282 Putative transposase DNA-binding domain SDZ_RS03995 PF01385 Probable transposase SDZ_RS04005 PF00912 Transglycosylase SDZ_RS04005 PF00905 Penicillin binding protein transpeptidase domain SDZ_RS04005 PF14814 Bifunctional transglycosylase second domain SDZ_RS04010 PF01258 Prokaryotic dksA/traR C4-type zinc finger SDZ_RS04015 PF00749 tRNA synthetases class I (E and Q), catalytic domain SDZ_RS04020 PF12626 Polymerase A arginine-rich C-terminus SDZ_RS04020 PF01743 Poly A polymerase head domain SDZ_RS04020 PF12627 Probable RNA and SrmB- binding site of polymerase A SDZ_RS04025 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SDZ_RS04030 PF01195 Peptidyl-tRNA hydrolase SDZ_RS04035 PF01926 50S ribosome-binding GTPase SDZ_RS04035 PF06071 Protein of unknown function (DUF933) SDZ_RS04070 PF03781 Sulfatase-modifying factor enzyme 1 SDZ_RS04080 PF00005 ABC transporter SDZ_RS04110 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS04110 PF09820 Predicted AAA-ATPase SDZ_RS04130 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB SDZ_RS04140 PF00700 Bacterial flagellin C-terminal helical region SDZ_RS04140 PF00669 Bacterial flagellin N-terminal helical region SDZ_RS04145 PF00669 Bacterial flagellin N-terminal helical region SDZ_RS04145 PF00700 Bacterial flagellin C-terminal helical region SDZ_RS04145 PF07196 Flagellin hook IN motif SDZ_RS04155 PF00873 AcrB/AcrD/AcrF family SDZ_RS04160 PF00529 HlyD membrane-fusion protein of T1SS SDZ_RS04160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SDZ_RS04175 PF00005 ABC transporter SDZ_RS04200 PF00691 OmpA family SDZ_RS04205 PF07676 WD40-like Beta Propeller Repeat SDZ_RS04205 PF04052 TolB amino-terminal domain SDZ_RS04215 PF02472 Biopolymer transport protein ExbD/TolR SDZ_RS04220 PF01618 MotA/TolQ/ExbB proton channel family SDZ_RS04225 PF03061 Thioesterase superfamily SDZ_RS04230 PF05491 RuvB C-terminal winged helix domain SDZ_RS04230 PF05496 Holliday junction DNA helicase RuvB P-loop domain SDZ_RS04230 PF17864 RuvB AAA lid domain SDZ_RS04240 PF02075 Crossover junction endodeoxyribonuclease RuvC SDZ_RS04250 PF01297 Zinc-uptake complex component A periplasmic SDZ_RS04255 PF00005 ABC transporter SDZ_RS04260 PF00950 ABC 3 transport family SDZ_RS04270 PF00892 EamA-like transporter family SDZ_RS04290 PF01695 IstB-like ATP binding protein SDZ_RS04310 PF14718 Soluble lytic murein transglycosylase L domain SDZ_RS04310 PF01464 Transglycosylase SLT domain SDZ_RS04315 PF00209 Sodium:neurotransmitter symporter family SDZ_RS04320 PF00209 Sodium:neurotransmitter symporter family SDZ_RS04325 PF00209 Sodium:neurotransmitter symporter family SDZ_RS04330 PF00575 S1 RNA binding domain SDZ_RS04330 PF01138 3' exoribonuclease family, domain 1 SDZ_RS04330 PF00013 KH domain SDZ_RS04330 PF03725 3' exoribonuclease family, domain 2 SDZ_RS04330 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SDZ_RS04335 PF00312 Ribosomal protein S15 SDZ_RS04340 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SDZ_RS04340 PF00356 Bacterial regulatory proteins, lacI family SDZ_RS04345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SDZ_RS04345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SDZ_RS04350 PF02653 Branched-chain amino acid transport system / permease component SDZ_RS04355 PF00005 ABC transporter SDZ_RS04360 PF13407 Periplasmic binding protein domain SDZ_RS04370 PF01584 CheW-like domain SDZ_RS04380 PF13614 AAA domain SDZ_RS04385 PF00691 OmpA family SDZ_RS04390 PF01618 MotA/TolQ/ExbB proton channel family SDZ_RS04395 PF00072 Response regulator receiver domain SDZ_RS04395 PF01339 CheB methylesterase SDZ_RS04400 PF01627 Hpt domain SDZ_RS04400 PF00072 Response regulator receiver domain SDZ_RS04400 PF01584 CheW-like domain SDZ_RS04400 PF02895 Signal transducing histidine kinase, homodimeric domain SDZ_RS04400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDZ_RS04405 PF04344 Chemotaxis phosphatase, CheZ SDZ_RS04410 PF00072 Response regulator receiver domain SDZ_RS04415 PF04545 Sigma-70, region 4 SDZ_RS04415 PF04542 Sigma-70 region 2 SDZ_RS04415 PF04539 Sigma-70 region 3 SDZ_RS04420 PF10609 NUBPL iron-transfer P-loop NTPase SDZ_RS04425 PF00448 SRP54-type protein, GTPase domain SDZ_RS04430 PF00771 FHIPEP family SDZ_RS04435 PF04287 tRNA pseudouridine synthase C SDZ_RS04440 PF03652 Holliday junction resolvase SDZ_RS04450 PF03577 Peptidase family C69 SDZ_RS04455 PF03577 Peptidase family C69 SDZ_RS04460 PF13667 ThiC-associated domain SDZ_RS04460 PF01964 Radical SAM ThiC family SDZ_RS04460 PF02581 Thiamine monophosphate synthase SDZ_RS04470 PF02110 Hydroxyethylthiazole kinase family SDZ_RS04500 PF02525 Flavodoxin-like fold SDZ_RS04505 PF00216 Bacterial DNA-binding protein SDZ_RS04515 PF01871 AMMECR1 SDZ_RS04515 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase SDZ_RS04520 PF08544 GHMP kinases C terminal SDZ_RS04520 PF10509 Galactokinase galactose-binding signature SDZ_RS04520 PF00288 GHMP kinases N terminal domain SDZ_RS04525 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SDZ_RS04525 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SDZ_RS04530 PF16363 GDP-mannose 4,6 dehydratase SDZ_RS04535 PF00356 Bacterial regulatory proteins, lacI family SDZ_RS04540 PF03279 Bacterial lipid A biosynthesis acyltransferase SDZ_RS04550 PF08335 GlnD PII-uridylyltransferase SDZ_RS04550 PF03710 Glutamate-ammonia ligase adenylyltransferase SDZ_RS04565 PF13416 Bacterial extracellular solute-binding protein SDZ_RS04570 PF00672 HAMP domain SDZ_RS04570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDZ_RS04600 PF01385 Probable transposase SDZ_RS04600 PF12323 Helix-turn-helix domain SDZ_RS04600 PF07282 Putative transposase DNA-binding domain SDZ_RS04605 PF01964 Radical SAM ThiC family SDZ_RS04605 PF13667 ThiC-associated domain SDZ_RS04615 PF01584 CheW-like domain SDZ_RS04615 PF00072 Response regulator receiver domain SDZ_RS04620 PF01791 DeoC/LacD family aldolase SDZ_RS04625 PF13407 Periplasmic binding protein domain SDZ_RS04630 PF02653 Branched-chain amino acid transport system / permease component SDZ_RS04635 PF02653 Branched-chain amino acid transport system / permease component SDZ_RS04640 PF00005 ABC transporter SDZ_RS04645 PF00325 Bacterial regulatory proteins, crp family SDZ_RS04645 PF04198 Putative sugar-binding domain SDZ_RS04650 PF04198 Putative sugar-binding domain SDZ_RS04655 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SDZ_RS04655 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SDZ_RS04665 PF13173 AAA domain SDZ_RS04665 PF13635 Domain of unknown function (DUF4143) SDZ_RS04675 PF01471 Putative peptidoglycan binding domain SDZ_RS04675 PF13401 AAA domain SDZ_RS04690 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS04690 PF09820 Predicted AAA-ATPase SDZ_RS04695 PF01966 HD domain SDZ_RS04695 PF01743 Poly A polymerase head domain SDZ_RS04695 PF12627 Probable RNA and SrmB- binding site of polymerase A SDZ_RS04700 PF00072 Response regulator receiver domain SDZ_RS04700 PF00196 Bacterial regulatory proteins, luxR family SDZ_RS04710 PF01177 Asp/Glu/Hydantoin racemase SDZ_RS04715 PF00255 Glutathione peroxidase SDZ_RS04720 PF02673 Bacitracin resistance protein BacA SDZ_RS04730 PF02152 Dihydroneopterin aldolase SDZ_RS04735 PF00814 Glycoprotease family SDZ_RS04740 PF01695 IstB-like ATP binding protein SDZ_RS04760 PF02580 D-Tyr-tRNA(Tyr) deacylase SDZ_RS04765 PF01165 Ribosomal protein S21 SDZ_RS04775 PF00248 Aldo/keto reductase family SDZ_RS04780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SDZ_RS04780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SDZ_RS04785 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SDZ_RS04785 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SDZ_RS04840 PF12850 Calcineurin-like phosphoesterase superfamily domain SDZ_RS04850 PF13416 Bacterial extracellular solute-binding protein SDZ_RS04855 PF02264 LamB porin SDZ_RS04860 PF02653 Branched-chain amino acid transport system / permease component SDZ_RS04865 PF02653 Branched-chain amino acid transport system / permease component SDZ_RS04870 PF00005 ABC transporter SDZ_RS04875 PF13407 Periplasmic binding protein domain SDZ_RS04885 PF07085 DRTGG domain SDZ_RS04885 PF01515 Phosphate acetyl/butaryl transferase SDZ_RS04890 PF08338 Domain of unknown function (DUF1731) SDZ_RS04890 PF01370 NAD dependent epimerase/dehydratase family SDZ_RS04895 PF00596 Class II Aldolase and Adducin N-terminal domain SDZ_RS04900 PF00356 Bacterial regulatory proteins, lacI family SDZ_RS04900 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SDZ_RS04915 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain SDZ_RS04930 PF00109 Beta-ketoacyl synthase, N-terminal domain SDZ_RS04930 PF02801 Beta-ketoacyl synthase, C-terminal domain SDZ_RS04935 PF00550 Phosphopantetheine attachment site SDZ_RS04945 PF00698 Acyl transferase domain SDZ_RS04950 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SDZ_RS04950 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SDZ_RS04955 PF02504 Fatty acid synthesis protein SDZ_RS04960 PF01783 Ribosomal L32p protein family SDZ_RS04975 PF13419 Haloacid dehalogenase-like hydrolase SDZ_RS04980 PF00849 RNA pseudouridylate synthase SDZ_RS04980 PF01479 S4 domain SDZ_RS04985 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS04985 PF09820 Predicted AAA-ATPase SDZ_RS04995 PF10150 Ribonuclease E/G family SDZ_RS04995 PF12111 Polyribonucleotide phosphorylase C terminal SDZ_RS04995 PF00575 S1 RNA binding domain SDZ_RS05000 PF00571 CBS domain SDZ_RS05010 PF13173 AAA domain SDZ_RS05010 PF13635 Domain of unknown function (DUF4143) SDZ_RS05015 PF00459 Inositol monophosphatase family SDZ_RS05030 PF17757 UvrB interaction domain SDZ_RS05030 PF12344 Ultra-violet resistance protein B SDZ_RS05030 PF04851 Type III restriction enzyme, res subunit SDZ_RS05030 PF00271 Helicase conserved C-terminal domain SDZ_RS05030 PF02151 UvrB/uvrC motif SDZ_RS05035 PF05870 Phenolic acid decarboxylase (PAD) SDZ_RS05040 PF03551 Transcriptional regulator PadR-like family SDZ_RS05040 PF10400 Virulence activator alpha C-term SDZ_RS05045 PF00990 Diguanylate cyclase, GGDEF domain SDZ_RS05045 PF00563 EAL domain SDZ_RS05045 PF03707 Bacterial signalling protein N terminal repeat SDZ_RS05070 PF01965 DJ-1/PfpI family SDZ_RS05075 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS05075 PF09820 Predicted AAA-ATPase SDZ_RS05080 PF13654 AAA domain SDZ_RS05080 PF05362 Lon protease (S16) C-terminal proteolytic domain SDZ_RS05085 PF04357 TamB, inner membrane protein subunit of TAM complex SDZ_RS05090 PF17243 POTRA domain TamA domain 1 SDZ_RS05090 PF01103 Surface antigen SDZ_RS05095 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SDZ_RS05095 PF00117 Glutamine amidotransferase class-I SDZ_RS05100 PF02142 MGS-like domain SDZ_RS05100 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SDZ_RS05100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SDZ_RS05120 PF13401 AAA domain SDZ_RS05120 PF01471 Putative peptidoglycan binding domain SDZ_RS05165 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDZ_RS05170 PF00255 Glutathione peroxidase SDZ_RS05185 PF00120 Glutamine synthetase, catalytic domain SDZ_RS05185 PF03951 Glutamine synthetase, beta-Grasp domain SDZ_RS05225 PF04972 BON domain SDZ_RS05225 PF01476 LysM domain SDZ_RS05235 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SDZ_RS05235 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SDZ_RS05255 PF01113 Dihydrodipicolinate reductase, N-terminus SDZ_RS05255 PF05173 Dihydrodipicolinate reductase, C-terminus SDZ_RS05265 PF02463 RecF/RecN/SMC N terminal domain SDZ_RS05270 PF01513 ATP-NAD kinase SDZ_RS05280 PF02033 Ribosome-binding factor A SDZ_RS05285 PF08364 Bacterial translation initiation factor IF-2 associated region SDZ_RS05285 PF00009 Elongation factor Tu GTP binding domain SDZ_RS05285 PF11987 Translation-initiation factor 2 SDZ_RS05285 PF04760 Translation initiation factor IF-2, N-terminal region SDZ_RS05290 PF13184 NusA-like KH domain SDZ_RS05290 PF08529 NusA N-terminal domain SDZ_RS05290 PF00575 S1 RNA binding domain SDZ_RS05295 PF02576 RimP N-terminal domain SDZ_RS05295 PF17384 RimP C-terminal SH3 domain SDZ_RS05300 PF03741 Integral membrane protein TerC family SDZ_RS05300 PF03471 Transporter associated domain SDZ_RS05300 PF00571 CBS domain SDZ_RS05305 PF01479 S4 domain SDZ_RS05305 PF00849 RNA pseudouridylate synthase SDZ_RS05315 PF01812 5-formyltetrahydrofolate cyclo-ligase family SDZ_RS05320 PF03840 Preprotein translocase SecG subunit SDZ_RS05325 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SDZ_RS05325 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SDZ_RS05325 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SDZ_RS05325 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SDZ_RS05335 PF17862 AAA+ lid domain SDZ_RS05335 PF06480 FtsH Extracellular SDZ_RS05335 PF00004 ATPase family associated with various cellular activities (AAA) SDZ_RS05335 PF01434 Peptidase family M41 SDZ_RS05340 PF01728 FtsJ-like methyltransferase SDZ_RS05345 PF01985 CRS1 / YhbY (CRM) domain SDZ_RS05350 PF03449 Transcription elongation factor, N-terminal SDZ_RS05350 PF01272 Transcription elongation factor, GreA/GreB, C-term SDZ_RS05355 PF00226 DnaJ domain SDZ_RS05355 PF01556 DnaJ C terminal domain SDZ_RS05355 PF00684 DnaJ central domain SDZ_RS05360 PF00012 Hsp70 protein SDZ_RS05365 PF01025 GrpE SDZ_RS05370 PF04355 SmpA / OmlA family SDZ_RS05380 PF02503 Polyphosphate kinase middle domain SDZ_RS05380 PF13089 Polyphosphate kinase N-terminal domain SDZ_RS05380 PF13090 Polyphosphate kinase C-terminal domain 2 SDZ_RS05380 PF17941 Polyphosphate kinase C-terminal domain 1 SDZ_RS05385 PF02646 RmuC family SDZ_RS05390 PF10369 Small subunit of acetolactate synthase SDZ_RS05395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SDZ_RS05395 PF00205 Thiamine pyrophosphate enzyme, central domain SDZ_RS05395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SDZ_RS05405 PF10369 Small subunit of acetolactate synthase SDZ_RS05410 PF00205 Thiamine pyrophosphate enzyme, central domain SDZ_RS05410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SDZ_RS05410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SDZ_RS05420 PF13183 4Fe-4S dicluster domain SDZ_RS05420 PF01565 FAD binding domain SDZ_RS05420 PF02913 FAD linked oxidases, C-terminal domain SDZ_RS05465 PF02661 Fic/DOC family SDZ_RS05465 PF17841 BID domain of Bartonella effector protein (Bep) SDZ_RS05470 PF01938 TRAM domain SDZ_RS05470 PF00919 Uncharacterized protein family UPF0004 SDZ_RS05470 PF04055 Radical SAM superfamily SDZ_RS05475 PF02562 PhoH-like protein SDZ_RS05480 PF02130 Uncharacterized protein family UPF0054 SDZ_RS05485 PF00571 CBS domain SDZ_RS05485 PF03471 Transporter associated domain SDZ_RS05490 PF00795 Carbon-nitrogen hydrolase SDZ_RS05540 PF00520 Ion transport protein SDZ_RS05540 PF00027 Cyclic nucleotide-binding domain SDZ_RS05555 PF17969 L,D-transpeptidase C-terminal domain SDZ_RS05555 PF03734 L,D-transpeptidase catalytic domain SDZ_RS05565 PF08264 Anticodon-binding domain of tRNA SDZ_RS05565 PF13603 Leucyl-tRNA synthetase, Domain 2 SDZ_RS05565 PF00133 tRNA synthetases class I (I, L, M and V) SDZ_RS05580 PF01467 Cytidylyltransferase-like SDZ_RS05590 PF02590 Predicted SPOUT methyltransferase SDZ_RS05595 PF00905 Penicillin binding protein transpeptidase domain SDZ_RS05595 PF03717 Penicillin-binding Protein dimerisation domain SDZ_RS05600 PF01098 Cell cycle protein SDZ_RS05605 PF13406 Transglycosylase SLT domain SDZ_RS05610 PF05036 Sporulation related domain SDZ_RS05610 PF03330 Lytic transglycolase SDZ_RS05615 PF07943 Penicillin-binding protein 5, C-terminal domain SDZ_RS05615 PF00768 D-alanyl-D-alanine carboxypeptidase SDZ_RS05620 PF04359 Protein of unknown function (DUF493) SDZ_RS05625 PF02698 DUF218 domain SDZ_RS05630 PF02086 D12 class N6 adenine-specific DNA methyltransferase SDZ_RS05640 PF00465 Iron-containing alcohol dehydrogenase SDZ_RS05645 PF02086 D12 class N6 adenine-specific DNA methyltransferase SDZ_RS05650 PF03948 Ribosomal protein L9, C-terminal domain SDZ_RS05650 PF01281 Ribosomal protein L9, N-terminal domain SDZ_RS05655 PF01084 Ribosomal protein S18 SDZ_RS05660 PF01250 Ribosomal protein S6 SDZ_RS05665 PF08032 RNA 2'-O ribose methyltransferase substrate binding SDZ_RS05665 PF00588 SpoU rRNA Methylase family SDZ_RS05670 PF08461 Ribonuclease R winged-helix domain SDZ_RS05670 PF08206 Ribonuclease B OB domain SDZ_RS05670 PF00773 RNB domain SDZ_RS05670 PF00575 S1 RNA binding domain SDZ_RS05670 PF17876 Cold shock domain SDZ_RS05675 PF04055 Radical SAM superfamily SDZ_RS05675 PF06969 HemN C-terminal domain SDZ_RS05680 PF01725 Ham1 family SDZ_RS05685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SDZ_RS05685 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDZ_RS05695 PF00860 Permease family SDZ_RS05700 PF08361 MAATS-type transcriptional repressor, C-terminal region SDZ_RS05700 PF00440 Bacterial regulatory proteins, tetR family SDZ_RS05705 PF13419 Haloacid dehalogenase-like hydrolase SDZ_RS05710 PF00455 DeoR C terminal sensor domain SDZ_RS05710 PF08220 DeoR-like helix-turn-helix domain SDZ_RS05715 PF02447 GntP family permease SDZ_RS05720 PF04166 Pyridoxal phosphate biosynthetic protein PdxA SDZ_RS05725 PF07005 Sugar-binding N-terminal domain SDZ_RS05725 PF17042 Nucleotide-binding C-terminal domain SDZ_RS05730 PF00343 Carbohydrate phosphorylase SDZ_RS05735 PF09820 Predicted AAA-ATPase SDZ_RS05735 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS05740 PF01312 FlhB HrpN YscU SpaS Family SDZ_RS05745 PF00204 DNA gyrase B SDZ_RS05745 PF00986 DNA gyrase B subunit, carboxyl terminus SDZ_RS05745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDZ_RS05745 PF01751 Toprim domain SDZ_RS05750 PF00512 His Kinase A (phospho-acceptor) domain SDZ_RS05750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDZ_RS05755 PF00072 Response regulator receiver domain SDZ_RS05755 PF00486 Transcriptional regulatory protein, C terminal SDZ_RS05765 PF00149 Calcineurin-like phosphoesterase SDZ_RS05770 PF00293 NUDIX domain SDZ_RS05775 PF01979 Amidohydrolase family SDZ_RS05780 PF00579 tRNA synthetases class I (W and Y) SDZ_RS05785 PF13419 Haloacid dehalogenase-like hydrolase SDZ_RS05790 PF00834 Ribulose-phosphate 3 epimerase family SDZ_RS05795 PF05036 Sporulation related domain SDZ_RS05800 PF01761 3-dehydroquinate synthase SDZ_RS05805 PF01202 Shikimate kinase SDZ_RS05810 PF03825 Nucleoside H+ symporter SDZ_RS05815 PF00905 Penicillin binding protein transpeptidase domain SDZ_RS05815 PF00912 Transglycosylase SDZ_RS05815 PF17092 Penicillin-binding protein OB-like domain SDZ_RS05825 PF10431 C-terminal, D2-small domain, of ClpB protein SDZ_RS05825 PF07724 AAA domain (Cdc48 subfamily) SDZ_RS05825 PF00004 ATPase family associated with various cellular activities (AAA) SDZ_RS05825 PF17871 AAA lid domain SDZ_RS05925 PF02811 PHP domain SDZ_RS05930 PF13419 Haloacid dehalogenase-like hydrolase SDZ_RS05935 PF01980 tRNA-methyltransferase O SDZ_RS05935 PF18389 TrmO C-terminal domain SDZ_RS05945 PF00749 tRNA synthetases class I (E and Q), catalytic domain SDZ_RS05950 PF00248 Aldo/keto reductase family SDZ_RS05955 PF05524 PEP-utilising enzyme, N-terminal SDZ_RS05955 PF00391 PEP-utilising enzyme, mobile domain SDZ_RS05955 PF02896 PEP-utilising enzyme, TIM barrel domain SDZ_RS05960 PF17042 Nucleotide-binding C-terminal domain SDZ_RS05960 PF07005 Sugar-binding N-terminal domain SDZ_RS05975 PF00990 Diguanylate cyclase, GGDEF domain SDZ_RS05975 PF08447 PAS fold SDZ_RS05975 PF00563 EAL domain SDZ_RS05975 PF08448 PAS fold SDZ_RS05990 PF08220 DeoR-like helix-turn-helix domain SDZ_RS05990 PF00455 DeoR C terminal sensor domain SDZ_RS05995 PF00107 Zinc-binding dehydrogenase SDZ_RS05995 PF08240 Alcohol dehydrogenase GroES-like domain SDZ_RS06000 PF01791 DeoC/LacD family aldolase SDZ_RS06005 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SDZ_RS06005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SDZ_RS06010 PF03480 Bacterial extracellular solute-binding protein, family 7 SDZ_RS06020 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SDZ_RS06025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SDZ_RS06025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SDZ_RS06030 PF02595 Glycerate kinase family SDZ_RS06040 PF00342 Phosphoglucose isomerase SDZ_RS06065 PF02321 Outer membrane efflux protein SDZ_RS06085 PF01695 IstB-like ATP binding protein SDZ_RS06100 PF03169 OPT oligopeptide transporter protein SDZ_RS06105 PF00860 Permease family SDZ_RS06115 PF17209 Hfq protein SDZ_RS06120 PF01467 Cytidylyltransferase-like SDZ_RS06120 PF00294 pfkB family carbohydrate kinase SDZ_RS06125 PF00571 CBS domain SDZ_RS06125 PF01380 SIS domain SDZ_RS06145 PF02810 SEC-C motif SDZ_RS06145 PF07517 SecA DEAD-like domain SDZ_RS06145 PF01043 SecA preprotein cross-linking domain SDZ_RS06145 PF07516 SecA Wing and Scaffold domain SDZ_RS06155 PF02666 Phosphatidylserine decarboxylase SDZ_RS06160 PF00890 FAD binding domain SDZ_RS06160 PF02910 Fumarate reductase flavoprotein C-term SDZ_RS06165 PF13085 2Fe-2S iron-sulfur cluster binding domain SDZ_RS06165 PF13183 4Fe-4S dicluster domain SDZ_RS06170 PF02300 Fumarate reductase subunit C SDZ_RS06175 PF02313 Fumarate reductase subunit D SDZ_RS06180 PF02887 Pyruvate kinase, alpha/beta domain SDZ_RS06180 PF00224 Pyruvate kinase, barrel domain SDZ_RS06185 PF02561 Flagellar protein FliS SDZ_RS06205 PF00460 Flagella basal body rod protein SDZ_RS06205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SDZ_RS06210 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SDZ_RS06210 PF10135 Rod binding protein SDZ_RS06215 PF02954 Bacterial regulatory protein, Fis family SDZ_RS06215 PF06490 Flagellar regulatory protein FleQ SDZ_RS06215 PF00158 Sigma-54 interaction domain SDZ_RS06220 PF02719 Polysaccharide biosynthesis protein SDZ_RS06225 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SDZ_RS06230 PF02348 Cytidylyltransferase SDZ_RS06240 PF03167 Uracil DNA glycosylase superfamily SDZ_RS06250 PF00800 Prephenate dehydratase SDZ_RS06250 PF01817 Chorismate mutase type II SDZ_RS06280 PF01925 Sulfite exporter TauE/SafE SDZ_RS06285 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SDZ_RS06285 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SDZ_RS06290 PF07055 Enoyl reductase FAD binding domain SDZ_RS06290 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase SDZ_RS06290 PF12241 Trans-2-enoyl-CoA reductase catalytic region SDZ_RS06295 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family SDZ_RS06300 PF00155 Aminotransferase class I and II SDZ_RS06310 PF01029 NusB family SDZ_RS06310 PF01189 16S rRNA methyltransferase RsmB/F SDZ_RS06315 PF00270 DEAD/DEAH box helicase SDZ_RS06315 PF03880 DbpA RNA binding domain SDZ_RS06315 PF00271 Helicase conserved C-terminal domain SDZ_RS06320 PF08502 LeuA allosteric (dimerisation) domain SDZ_RS06320 PF00682 HMGL-like SDZ_RS06325 PF00180 Isocitrate/isopropylmalate dehydrogenase SDZ_RS06330 PF00330 Aconitase family (aconitate hydratase) SDZ_RS06335 PF00694 Aconitase C-terminal domain SDZ_RS06340 PF01925 Sulfite exporter TauE/SafE SDZ_RS06345 PF01263 Aldose 1-epimerase SDZ_RS06350 PF00881 Nitroreductase family SDZ_RS06425 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system SDZ_RS06450 PF03739 Lipopolysaccharide export system permease LptF/LptG SDZ_RS06465 PF01695 IstB-like ATP binding protein SDZ_RS06470 PF01695 IstB-like ATP binding protein SDZ_RS06485 PF12833 Helix-turn-helix domain SDZ_RS06485 PF02311 AraC-like ligand binding domain SDZ_RS06490 PF03739 Lipopolysaccharide export system permease LptF/LptG SDZ_RS06495 PF09115 DNA polymerase III, delta subunit, C terminal SDZ_RS06500 PF02223 Thymidylate kinase SDZ_RS06505 PF02618 YceG-like family SDZ_RS06515 PF10458 Valyl tRNA synthetase tRNA binding arm SDZ_RS06515 PF00133 tRNA synthetases class I (I, L, M and V) SDZ_RS06515 PF08264 Anticodon-binding domain of tRNA SDZ_RS06530 PF01053 Cys/Met metabolism PLP-dependent enzyme SDZ_RS06535 PF02401 LytB protein SDZ_RS06540 PF01252 Signal peptidase (SPase) II SDZ_RS06545 PF00133 tRNA synthetases class I (I, L, M and V) SDZ_RS06545 PF08264 Anticodon-binding domain of tRNA SDZ_RS06545 PF06827 Zinc finger found in FPG and IleRS SDZ_RS06550 PF06574 FAD synthetase SDZ_RS06550 PF01687 Riboflavin kinase SDZ_RS06565 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS06565 PF09820 Predicted AAA-ATPase SDZ_RS06570 PF09820 Predicted AAA-ATPase SDZ_RS06570 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS06575 PF06719 AraC-type transcriptional regulator N-terminus SDZ_RS06575 PF12833 Helix-turn-helix domain SDZ_RS06595 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS06595 PF09820 Predicted AAA-ATPase SDZ_RS06600 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS06600 PF09820 Predicted AAA-ATPase SDZ_RS06630 PF02350 UDP-N-acetylglucosamine 2-epimerase SDZ_RS06635 PF03102 NeuB family SDZ_RS06635 PF08666 SAF domain SDZ_RS06645 PF00483 Nucleotidyl transferase SDZ_RS06650 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SDZ_RS06655 PF02719 Polysaccharide biosynthesis protein SDZ_RS06675 PF00669 Bacterial flagellin N-terminal helical region SDZ_RS06675 PF07196 Flagellin hook IN motif SDZ_RS06675 PF00700 Bacterial flagellin C-terminal helical region SDZ_RS06695 PF02774 Semialdehyde dehydrogenase, dimerisation domain SDZ_RS06695 PF01118 Semialdehyde dehydrogenase, NAD binding domain SDZ_RS06705 PF18381 YcaO cyclodehydratase C-terminal domain SDZ_RS06705 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding SDZ_RS06715 PF00288 GHMP kinases N terminal domain SDZ_RS06715 PF08544 GHMP kinases C terminal SDZ_RS06725 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SDZ_RS06725 PF14572 Phosphoribosyl synthetase-associated domain SDZ_RS06735 PF02875 Mur ligase family, glutamate ligase domain SDZ_RS06735 PF08245 Mur ligase middle domain SDZ_RS06735 PF01225 Mur ligase family, catalytic domain SDZ_RS06740 PF02424 ApbE family SDZ_RS06750 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SDZ_RS06750 PF03129 Anticodon binding domain SDZ_RS06750 PF04073 Aminoacyl-tRNA editing domain SDZ_RS06755 PF02119 Flagellar P-ring protein SDZ_RS06760 PF02107 Flagellar L-ring protein SDZ_RS06765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SDZ_RS06765 PF00460 Flagella basal body rod protein SDZ_RS06770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SDZ_RS06770 PF00460 Flagella basal body rod protein SDZ_RS06775 PF03963 Flagellar hook capping protein - N-terminal region SDZ_RS06775 PF13861 FlgD Tudor-like domain SDZ_RS06775 PF13860 FlgD Ig-like domain SDZ_RS06780 PF00460 Flagella basal body rod protein SDZ_RS06780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SDZ_RS06785 PF00460 Flagella basal body rod protein SDZ_RS06795 PF03705 CheR methyltransferase, all-alpha domain SDZ_RS06795 PF01739 CheR methyltransferase, SAM binding domain SDZ_RS06810 PF07728 AAA domain (dynein-related subfamily) SDZ_RS06810 PF12556 Cobaltochelatase CobS subunit N terminal SDZ_RS06810 PF08406 CbbQ/NirQ/NorQ C-terminal SDZ_RS06840 PF01614 Bacterial transcriptional regulator SDZ_RS06840 PF09339 IclR helix-turn-helix domain SDZ_RS06845 PF02954 Bacterial regulatory protein, Fis family SDZ_RS06845 PF00072 Response regulator receiver domain SDZ_RS06845 PF00158 Sigma-54 interaction domain SDZ_RS06850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDZ_RS06850 PF00512 His Kinase A (phospho-acceptor) domain SDZ_RS06850 PF00989 PAS fold SDZ_RS06855 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal SDZ_RS06855 PF02769 AIR synthase related protein, C-terminal domain SDZ_RS06855 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SDZ_RS06870 PF02561 Flagellar protein FliS SDZ_RS06890 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS06890 PF09820 Predicted AAA-ATPase SDZ_RS06900 PF01471 Putative peptidoglycan binding domain SDZ_RS06900 PF13401 AAA domain SDZ_RS06955 PF17871 AAA lid domain SDZ_RS06955 PF07724 AAA domain (Cdc48 subfamily) SDZ_RS06955 PF00004 ATPase family associated with various cellular activities (AAA) SDZ_RS06955 PF02861 Clp amino terminal domain, pathogenicity island component SDZ_RS06955 PF10431 C-terminal, D2-small domain, of ClpB protein SDZ_RS06965 PF01479 S4 domain SDZ_RS06965 PF00849 RNA pseudouridylate synthase SDZ_RS06970 PF13525 Outer membrane lipoprotein SDZ_RS06975 PF00849 RNA pseudouridylate synthase SDZ_RS06995 PF13635 Domain of unknown function (DUF4143) SDZ_RS06995 PF13173 AAA domain SDZ_RS07025 PF00226 DnaJ domain SDZ_RS07025 PF05099 Tellurite resistance protein TerB SDZ_RS07030 PF05099 Tellurite resistance protein TerB SDZ_RS07030 PF00226 DnaJ domain SDZ_RS07035 PF00483 Nucleotidyl transferase SDZ_RS07040 PF01636 Phosphotransferase enzyme family SDZ_RS07045 PF02390 Putative methyltransferase SDZ_RS07050 PF00701 Dihydrodipicolinate synthetase family SDZ_RS07055 PF00152 tRNA synthetases class II (D, K and N) SDZ_RS07055 PF01336 OB-fold nucleic acid binding domain SDZ_RS07065 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SDZ_RS07065 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SDZ_RS07070 PF01168 Alanine racemase, N-terminal domain SDZ_RS07070 PF00842 Alanine racemase, C-terminal domain SDZ_RS07075 PF00772 DnaB-like helicase N terminal domain SDZ_RS07075 PF03796 DnaB-like helicase C terminal domain SDZ_RS07095 PF02599 Global regulator protein family SDZ_RS07100 PF01411 tRNA synthetases class II (A) SDZ_RS07100 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SDZ_RS07100 PF02272 DHHA1 domain SDZ_RS07105 PF02631 RecX family SDZ_RS07110 PF00154 recA bacterial DNA recombination protein SDZ_RS07125 PF00488 MutS domain V SDZ_RS07125 PF05192 MutS domain III SDZ_RS07125 PF05190 MutS family domain IV SDZ_RS07125 PF05188 MutS domain II SDZ_RS07125 PF01624 MutS domain I SDZ_RS07140 PF00589 Phage integrase family SDZ_RS07155 PF02899 Phage integrase, N-terminal SAM-like domain SDZ_RS07155 PF00589 Phage integrase family SDZ_RS07165 PF04545 Sigma-70, region 4 SDZ_RS07165 PF04539 Sigma-70 region 3 SDZ_RS07165 PF04542 Sigma-70 region 2 SDZ_RS07165 PF00140 Sigma-70 factor, region 1.2 SDZ_RS07170 PF01551 Peptidase family M23 SDZ_RS07170 PF01476 LysM domain SDZ_RS07175 PF09335 SNARE associated Golgi protein SDZ_RS07180 PF02542 YgbB family SDZ_RS07185 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SDZ_RS07190 PF04977 Septum formation initiator SDZ_RS07195 PF06418 CTP synthase N-terminus SDZ_RS07195 PF00117 Glutamine amidotransferase class-I SDZ_RS07205 PF02824 TGS domain SDZ_RS07205 PF04607 Region found in RelA / SpoT proteins SDZ_RS07205 PF13291 ACT domain SDZ_RS07210 PF01938 TRAM domain SDZ_RS07210 PF05958 tRNA (Uracil-5-)-methyltransferase SDZ_RS07215 PF11967 Recombination protein O N terminal SDZ_RS07215 PF02565 Recombination protein O C terminal SDZ_RS07220 PF07650 KH domain SDZ_RS07220 PF01926 50S ribosome-binding GTPase SDZ_RS07225 PF14622 Ribonuclease-III-like SDZ_RS07225 PF00035 Double-stranded RNA binding motif SDZ_RS07230 PF10502 Signal peptidase, peptidase S26 SDZ_RS07235 PF06421 GTP-binding protein LepA C-terminus SDZ_RS07235 PF00679 Elongation factor G C-terminus SDZ_RS07235 PF00009 Elongation factor Tu GTP binding domain SDZ_RS07235 PF03144 Elongation factor Tu domain 2 SDZ_RS07250 PF04542 Sigma-70 region 2 SDZ_RS07250 PF08281 Sigma-70, region 4 SDZ_RS07255 PF00890 FAD binding domain SDZ_RS07255 PF02910 Fumarate reductase flavoprotein C-term SDZ_RS07260 PF12794 Mechanosensitive ion channel inner membrane domain 1 SDZ_RS07260 PF12795 Mechanosensitive ion channel porin domain SDZ_RS07260 PF00924 Mechanosensitive ion channel SDZ_RS07265 PF12833 Helix-turn-helix domain SDZ_RS07275 PF13580 SIS domain SDZ_RS07280 PF00929 Exonuclease SDZ_RS07285 PF00075 RNase H SDZ_RS07295 PF03120 NAD-dependent DNA ligase OB-fold domain SDZ_RS07295 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SDZ_RS07295 PF12826 Helix-hairpin-helix motif SDZ_RS07295 PF00533 BRCA1 C Terminus (BRCT) domain SDZ_RS07295 PF01653 NAD-dependent DNA ligase adenylation domain SDZ_RS07300 PF04354 ZipA, C-terminal FtsZ-binding domain SDZ_RS07315 PF02896 PEP-utilising enzyme, TIM barrel domain SDZ_RS07315 PF05524 PEP-utilising enzyme, N-terminal SDZ_RS07315 PF00391 PEP-utilising enzyme, mobile domain SDZ_RS07320 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SDZ_RS07330 PF02233 NAD(P) transhydrogenase beta subunit SDZ_RS07335 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SDZ_RS07335 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch SDZ_RS07335 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SDZ_RS07340 PF00583 Acetyltransferase (GNAT) family SDZ_RS07355 PF00440 Bacterial regulatory proteins, tetR family SDZ_RS07360 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SDZ_RS07360 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SDZ_RS07365 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain SDZ_RS07365 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain SDZ_RS07370 PF00990 Diguanylate cyclase, GGDEF domain SDZ_RS07370 PF00563 EAL domain SDZ_RS07370 PF13188 PAS domain SDZ_RS07370 PF03707 Bacterial signalling protein N terminal repeat SDZ_RS07375 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SDZ_RS07375 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SDZ_RS07380 PF01938 TRAM domain SDZ_RS07380 PF05958 tRNA (Uracil-5-)-methyltransferase SDZ_RS07390 PF05958 tRNA (Uracil-5-)-methyltransferase SDZ_RS07390 PF01938 TRAM domain SDZ_RS07405 PF10410 DnaB-helicase binding domain of primase SDZ_RS07405 PF01807 CHC2 zinc finger SDZ_RS07405 PF08278 DNA primase DnaG DnaB-binding SDZ_RS07405 PF08275 DNA primase catalytic core, N-terminal domain SDZ_RS07410 PF16254 Domain of unknown function (DUF4910) SDZ_RS07410 PF09940 Domain of unknown function (DUF2172) SDZ_RS07410 PF16221 winged helix-turn-helix SDZ_RS07415 PF00149 Calcineurin-like phosphoesterase SDZ_RS07420 PF00186 Dihydrofolate reductase SDZ_RS07425 PF01018 GTP1/OBG SDZ_RS07425 PF01926 50S ribosome-binding GTPase SDZ_RS07430 PF01016 Ribosomal L27 protein SDZ_RS07435 PF00829 Ribosomal prokaryotic L21 protein SDZ_RS07440 PF00348 Polyprenyl synthetase SDZ_RS07445 PF03616 Sodium/glutamate symporter SDZ_RS07450 PF00709 Adenylosuccinate synthetase SDZ_RS07455 PF01145 SPFH domain / Band 7 family SDZ_RS07460 PF01145 SPFH domain / Band 7 family SDZ_RS07460 PF12221 Bacterial membrane protein N terminal SDZ_RS07465 PF01926 50S ribosome-binding GTPase SDZ_RS07465 PF16360 GTP-binding GTPase Middle Region SDZ_RS07465 PF13167 GTP-binding GTPase N-terminal SDZ_RS07470 PF17209 Hfq protein SDZ_RS07475 PF00294 pfkB family carbohydrate kinase SDZ_RS07480 PF00356 Bacterial regulatory proteins, lacI family SDZ_RS07485 PF00083 Sugar (and other) transporter SDZ_RS07500 PF00135 Carboxylesterase family SDZ_RS07565 PF01119 DNA mismatch repair protein, C-terminal domain SDZ_RS07565 PF08676 MutL C terminal dimerisation domain SDZ_RS07570 PF01520 N-acetylmuramoyl-L-alanine amidase SDZ_RS07570 PF01476 LysM domain SDZ_RS07575 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SDZ_RS07580 PF03853 YjeF-related protein N-terminus SDZ_RS07580 PF01256 Carbohydrate kinase SDZ_RS07590 PF00480 ROK family SDZ_RS07595 PF17768 RecJ OB domain SDZ_RS07595 PF02272 DHHA1 domain SDZ_RS07595 PF01368 DHH family SDZ_RS07615 PF00378 Enoyl-CoA hydratase/isomerase SDZ_RS07620 PF03061 Thioesterase superfamily SDZ_RS07700 PF05154 TM2 domain SDZ_RS07725 PF02581 Thiamine monophosphate synthase SDZ_RS07730 PF00899 ThiF family SDZ_RS07745 PF06968 Biotin and Thiamin Synthesis associated domain SDZ_RS07745 PF04055 Radical SAM superfamily SDZ_RS07760 PF02664 S-Ribosylhomocysteinase (LuxS) SDZ_RS07770 PF00543 Nitrogen regulatory protein P-II SDZ_RS07780 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded SDZ_RS07785 PF03143 Elongation factor Tu C-terminal domain SDZ_RS07785 PF03144 Elongation factor Tu domain 2 SDZ_RS07785 PF00009 Elongation factor Tu GTP binding domain SDZ_RS07790 PF00679 Elongation factor G C-terminus SDZ_RS07790 PF14492 Elongation Factor G, domain II SDZ_RS07790 PF03764 Elongation factor G, domain IV SDZ_RS07790 PF00009 Elongation factor Tu GTP binding domain SDZ_RS07790 PF03144 Elongation factor Tu domain 2 SDZ_RS07795 PF00177 Ribosomal protein S7p/S5e SDZ_RS07800 PF00164 Ribosomal protein S12/S23 SDZ_RS07820 PF01042 Endoribonuclease L-PSP SDZ_RS07825 PF00623 RNA polymerase Rpb1, domain 2 SDZ_RS07825 PF05000 RNA polymerase Rpb1, domain 4 SDZ_RS07825 PF04997 RNA polymerase Rpb1, domain 1 SDZ_RS07825 PF04998 RNA polymerase Rpb1, domain 5 SDZ_RS07825 PF04983 RNA polymerase Rpb1, domain 3 SDZ_RS07830 PF04560 RNA polymerase Rpb2, domain 7 SDZ_RS07830 PF04565 RNA polymerase Rpb2, domain 3 SDZ_RS07830 PF04561 RNA polymerase Rpb2, domain 2 SDZ_RS07830 PF00562 RNA polymerase Rpb2, domain 6 SDZ_RS07830 PF04563 RNA polymerase beta subunit SDZ_RS07830 PF10385 RNA polymerase beta subunit external 1 domain SDZ_RS07835 PF00542 Ribosomal protein L7/L12 C-terminal domain SDZ_RS07835 PF16320 Ribosomal protein L7/L12 dimerisation domain SDZ_RS07840 PF00466 Ribosomal protein L10 SDZ_RS07845 PF00687 Ribosomal protein L1p/L10e family SDZ_RS07850 PF00298 Ribosomal protein L11, RNA binding domain SDZ_RS07850 PF03946 Ribosomal protein L11, N-terminal domain SDZ_RS07860 PF00547 Urease, gamma subunit SDZ_RS07865 PF00699 Urease beta subunit SDZ_RS07870 PF01979 Amidohydrolase family SDZ_RS07870 PF00449 Urease alpha-subunit, N-terminal domain SDZ_RS07875 PF05194 UreE urease accessory protein, C-terminal domain SDZ_RS07875 PF02814 UreE urease accessory protein, N-terminal domain SDZ_RS07880 PF01730 UreF SDZ_RS07885 PF02492 CobW/HypB/UreG, nucleotide-binding domain SDZ_RS07895 PF00005 ABC transporter SDZ_RS07900 PF12399 Branched-chain amino acid ATP-binding cassette transporter SDZ_RS07900 PF00005 ABC transporter SDZ_RS07910 PF02653 Branched-chain amino acid transport system / permease component SDZ_RS07920 PF00467 KOW motif SDZ_RS07920 PF02357 Transcription termination factor nusG SDZ_RS07925 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SDZ_RS07930 PF03144 Elongation factor Tu domain 2 SDZ_RS07930 PF03143 Elongation factor Tu C-terminal domain SDZ_RS07930 PF00009 Elongation factor Tu GTP binding domain SDZ_RS07955 PF00485 Phosphoribulokinase / Uridine kinase family SDZ_RS07960 PF02237 Biotin protein ligase C terminal domain SDZ_RS07960 PF08279 HTH domain SDZ_RS07960 PF03099 Biotin/lipoate A/B protein ligase family SDZ_RS07965 PF01565 FAD binding domain SDZ_RS07965 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SDZ_RS07970 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SDZ_RS07975 PF04204 Homoserine O-succinyltransferase SDZ_RS08005 PF01177 Asp/Glu/Hydantoin racemase SDZ_RS08010 PF05958 tRNA (Uracil-5-)-methyltransferase SDZ_RS08015 PF03949 Malic enzyme, NAD binding domain SDZ_RS08015 PF00390 Malic enzyme, N-terminal domain SDZ_RS08020 PF01197 Ribosomal protein L31 SDZ_RS08025 PF00271 Helicase conserved C-terminal domain SDZ_RS08025 PF17764 3′ DNA-binding domain (3′BD) SDZ_RS08025 PF18074 Primosomal protein N C-terminal domain SDZ_RS08025 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SDZ_RS08025 PF00270 DEAD/DEAH box helicase SDZ_RS08030 PF00750 tRNA synthetases class I (R) SDZ_RS08030 PF03485 Arginyl tRNA synthetase N terminal domain SDZ_RS08030 PF05746 DALR anticodon binding domain SDZ_RS08040 PF00227 Proteasome subunit SDZ_RS08045 PF10431 C-terminal, D2-small domain, of ClpB protein SDZ_RS08045 PF07724 AAA domain (Cdc48 subfamily) SDZ_RS08045 PF00004 ATPase family associated with various cellular activities (AAA) SDZ_RS08055 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SDZ_RS08055 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SDZ_RS08060 PF06426 Serine acetyltransferase, N-terminal SDZ_RS08060 PF00132 Bacterial transferase hexapeptide (six repeats) SDZ_RS08065 PF16916 Dimerisation domain of Zinc Transporter SDZ_RS08065 PF01545 Cation efflux family SDZ_RS08070 PF01553 Acyltransferase SDZ_RS08080 PF01523 Putative modulator of DNA gyrase SDZ_RS08095 PF03480 Bacterial extracellular solute-binding protein, family 7 SDZ_RS08100 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SDZ_RS08105 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component SDZ_RS08110 PF01202 Shikimate kinase SDZ_RS08115 PF00920 Dehydratase family SDZ_RS08120 PF01523 Putative modulator of DNA gyrase SDZ_RS08125 PF02545 Maf-like protein SDZ_RS08135 PF04085 rod shape-determining protein MreC SDZ_RS08145 PF01970 Tripartite tricarboxylate transporter TctA family SDZ_RS08165 PF09339 IclR helix-turn-helix domain SDZ_RS08165 PF01614 Bacterial transcriptional regulator SDZ_RS08170 PF05025 RbsD / FucU transport protein family SDZ_RS08175 PF07882 L-fucose isomerase, second N-terminal domain SDZ_RS08175 PF07881 L-fucose isomerase, first N-terminal domain SDZ_RS08175 PF02952 L-fucose isomerase, C-terminal domain SDZ_RS08180 PF12833 Helix-turn-helix domain SDZ_RS08180 PF02311 AraC-like ligand binding domain SDZ_RS08185 PF03480 Bacterial extracellular solute-binding protein, family 7 SDZ_RS08190 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SDZ_RS08200 PF01613 Flavin reductase like domain SDZ_RS08205 PF00436 Single-strand binding protein family SDZ_RS08210 PF17755 UvrA DNA-binding domain SDZ_RS08210 PF00005 ABC transporter SDZ_RS08210 PF17760 UvrA interaction domain SDZ_RS08220 PF04751 Protein of unknown function (DUF615) SDZ_RS08230 PF05494 MlaC protein SDZ_RS08235 PF02470 MlaD protein SDZ_RS08240 PF02405 Permease MlaE SDZ_RS08245 PF00005 ABC transporter SDZ_RS08255 PF06835 Lipopolysaccharide-assembly, LptC-related SDZ_RS08260 PF03968 OstA-like protein SDZ_RS08265 PF00005 ABC transporter SDZ_RS08265 PF12399 Branched-chain amino acid ATP-binding cassette transporter SDZ_RS08270 PF00309 Sigma-54 factor, Activator interacting domain (AID) SDZ_RS08270 PF04963 Sigma-54 factor, core binding domain SDZ_RS08270 PF04552 Sigma-54, DNA binding domain SDZ_RS08290 PF00248 Aldo/keto reductase family SDZ_RS08300 PF02525 Flavodoxin-like fold SDZ_RS08305 PF00465 Iron-containing alcohol dehydrogenase SDZ_RS08315 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SDZ_RS08325 PF03668 P-loop ATPase protein family SDZ_RS08335 PF00929 Exonuclease SDZ_RS08350 PF00308 Bacterial dnaA protein SDZ_RS08350 PF11638 DnaA N-terminal domain SDZ_RS08350 PF08299 Bacterial dnaA protein helix-turn-helix SDZ_RS08390 PF00140 Sigma-70 factor, region 1.2 SDZ_RS08390 PF04542 Sigma-70 region 2 SDZ_RS08390 PF04545 Sigma-70, region 4 SDZ_RS08395 PF02881 SRP54-type protein, helical bundle domain SDZ_RS08395 PF00448 SRP54-type protein, GTPase domain SDZ_RS08405 PF03315 Serine dehydratase beta chain SDZ_RS08405 PF03313 Serine dehydratase alpha chain SDZ_RS08410 PF03222 Tryptophan/tyrosine permease family SDZ_RS08415 PF00753 Metallo-beta-lactamase superfamily SDZ_RS08430 PF01810 LysE type translocator SDZ_RS08435 PF00155 Aminotransferase class I and II SDZ_RS08435 PF00392 Bacterial regulatory proteins, gntR family SDZ_RS08440 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SDZ_RS08440 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SDZ_RS08445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SDZ_RS08445 PF02874 ATP synthase alpha/beta family, beta-barrel domain SDZ_RS08450 PF00231 ATP synthase SDZ_RS08455 PF02874 ATP synthase alpha/beta family, beta-barrel domain SDZ_RS08455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SDZ_RS08455 PF00306 ATP synthase alpha/beta chain, C terminal domain SDZ_RS08460 PF00213 ATP synthase delta (OSCP) subunit SDZ_RS08465 PF00430 ATP synthase B/B' CF(0) SDZ_RS08470 PF00137 ATP synthase subunit C SDZ_RS08475 PF00119 ATP synthase A chain SDZ_RS08480 PF17762 HTH domain found in ParB protein SDZ_RS08480 PF02195 ParB-like nuclease domain SDZ_RS08485 PF13614 AAA domain SDZ_RS08490 PF02527 rRNA small subunit methyltransferase G SDZ_RS08495 PF01134 Glucose inhibited division protein A SDZ_RS08495 PF13932 GidA associated domain SDZ_RS08510 PF09285 Elongation factor P, C-terminal SDZ_RS08510 PF01132 Elongation factor P (EF-P) OB domain SDZ_RS08510 PF08207 Elongation factor P (EF-P) KOW-like domain SDZ_RS08520 PF13597 Anaerobic ribonucleoside-triphosphate reductase SDZ_RS08520 PF03477 ATP cone domain SDZ_RS08530 PF04055 Radical SAM superfamily SDZ_RS08535 PF10396 GTP-binding protein TrmE N-terminus SDZ_RS08535 PF12631 MnmE helical domain SDZ_RS08535 PF01926 50S ribosome-binding GTPase SDZ_RS08540 PF02096 60Kd inner membrane protein SDZ_RS08540 PF14849 YidC periplasmic domain SDZ_RS08545 PF01809 Putative membrane protein insertion efficiency factor SDZ_RS08550 PF00825 Ribonuclease P SDZ_RS08555 PF00468 Ribosomal protein L34 SDZ_RS08560 PF00308 Bacterial dnaA protein SDZ_RS08560 PF08299 Bacterial dnaA protein helix-turn-helix SDZ_RS08560 PF11638 DnaA N-terminal domain SDZ_RS08565 PF02768 DNA polymerase III beta subunit, C-terminal domain SDZ_RS08565 PF02767 DNA polymerase III beta subunit, central domain SDZ_RS08565 PF00712 DNA polymerase III beta subunit, N-terminal domain SDZ_RS08570 PF02463 RecF/RecN/SMC N terminal domain SDZ_RS08575 PF18053 DNA gyrase B subunit insert domain SDZ_RS08575 PF00986 DNA gyrase B subunit, carboxyl terminus SDZ_RS08575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDZ_RS08575 PF00204 DNA gyrase B SDZ_RS08575 PF01751 Toprim domain SDZ_RS08580 PF05746 DALR anticodon binding domain SDZ_RS08580 PF02092 Glycyl-tRNA synthetase beta subunit SDZ_RS08585 PF02091 Glycyl-tRNA synthetase alpha subunit SDZ_RS08590 PF02690 Na+/Pi-cotransporter SDZ_RS08615 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SDZ_RS08615 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SDZ_RS08615 PF06827 Zinc finger found in FPG and IleRS SDZ_RS08620 PF01467 Cytidylyltransferase-like SDZ_RS08625 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SDZ_RS08640 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) SDZ_RS08650 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SDZ_RS08655 PF01370 NAD dependent epimerase/dehydratase family SDZ_RS08660 PF01694 Rhomboid family SDZ_RS08660 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease SDZ_RS08670 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SDZ_RS08670 PF01676 Metalloenzyme superfamily SDZ_RS08675 PF00581 Rhodanese-like domain SDZ_RS08685 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SDZ_RS08685 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SDZ_RS08695 PF00037 4Fe-4S binding domain SDZ_RS08695 PF12798 4Fe-4S binding domain SDZ_RS08705 PF14535 AMP-binding enzyme C-terminal domain SDZ_RS08705 PF00501 AMP-binding enzyme SDZ_RS08710 PF01521 Iron-sulphur cluster biosynthesis SDZ_RS08710 PF01106 NifU-like domain SDZ_RS08715 PF01293 Phosphoenolpyruvate carboxykinase SDZ_RS08720 PF03449 Transcription elongation factor, N-terminal SDZ_RS08720 PF01272 Transcription elongation factor, GreA/GreB, C-term SDZ_RS08730 PF00561 alpha/beta hydrolase fold SDZ_RS08735 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SDZ_RS08740 PF00294 pfkB family carbohydrate kinase SDZ_RS08745 PF05025 RbsD / FucU transport protein family SDZ_RS08750 PF12833 Helix-turn-helix domain SDZ_RS08760 PF13407 Periplasmic binding protein domain SDZ_RS08770 PF00005 ABC transporter SDZ_RS08775 PF02653 Branched-chain amino acid transport system / permease component SDZ_RS08780 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SDZ_RS08790 PF00456 Transketolase, thiamine diphosphate binding domain SDZ_RS08795 PF02780 Transketolase, C-terminal domain SDZ_RS08795 PF02779 Transketolase, pyrimidine binding domain SDZ_RS08800 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SDZ_RS08800 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SDZ_RS08805 PF09820 Predicted AAA-ATPase SDZ_RS08805 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS08810 PF01430 Hsp33 protein SDZ_RS08815 PF01479 S4 domain SDZ_RS08820 PF00293 NUDIX domain SDZ_RS08825 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SDZ_RS08825 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SDZ_RS08830 PF00764 Arginosuccinate synthase SDZ_RS08835 PF00206 Lyase SDZ_RS08835 PF00583 Acetyltransferase (GNAT) family SDZ_RS08835 PF14698 Argininosuccinate lyase C-terminal SDZ_RS08840 PF00692 dUTPase SDZ_RS08845 PF02441 Flavoprotein SDZ_RS08845 PF04127 DNA / pantothenate metabolism flavoprotein SDZ_RS08850 PF00830 Ribosomal L28 family SDZ_RS08855 PF00471 Ribosomal protein L33 SDZ_RS08860 PF01389 OmpA-like transmembrane domain SDZ_RS08860 PF00691 OmpA family SDZ_RS08865 PF13407 Periplasmic binding protein domain SDZ_RS08870 PF02492 CobW/HypB/UreG, nucleotide-binding domain SDZ_RS08870 PF07683 Cobalamin synthesis protein cobW C-terminal domain SDZ_RS08880 PF02824 TGS domain SDZ_RS08880 PF04607 Region found in RelA / SpoT proteins SDZ_RS08880 PF13291 ACT domain SDZ_RS08885 PF01192 RNA polymerase Rpb6 SDZ_RS08890 PF00625 Guanylate kinase SDZ_RS08895 PF01926 50S ribosome-binding GTPase SDZ_RS08910 PF00291 Pyridoxal-phosphate dependent enzyme SDZ_RS08915 PF01053 Cys/Met metabolism PLP-dependent enzyme SDZ_RS08920 PF04072 Leucine carboxyl methyltransferase SDZ_RS08930 PF14535 AMP-binding enzyme C-terminal domain SDZ_RS08930 PF00501 AMP-binding enzyme SDZ_RS08935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SDZ_RS08940 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SDZ_RS08940 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SDZ_RS08955 PF00155 Aminotransferase class I and II SDZ_RS08960 PF00528 Binding-protein-dependent transport system inner membrane component SDZ_RS08965 PF00005 ABC transporter SDZ_RS08965 PF09383 NIL domain SDZ_RS08970 PF03180 NLPA lipoprotein SDZ_RS08980 PF00158 Sigma-54 interaction domain SDZ_RS08980 PF00072 Response regulator receiver domain SDZ_RS08980 PF02954 Bacterial regulatory protein, Fis family SDZ_RS08985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDZ_RS08985 PF00989 PAS fold SDZ_RS08985 PF00512 His Kinase A (phospho-acceptor) domain SDZ_RS09000 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB SDZ_RS09000 PF08479 POTRA domain, ShlB-type SDZ_RS09010 PF03631 Virulence factor BrkB SDZ_RS09020 PF00271 Helicase conserved C-terminal domain SDZ_RS09020 PF00270 DEAD/DEAH box helicase SDZ_RS09020 PF17191 RecG wedge domain SDZ_RS09025 PF13091 PLD-like domain SDZ_RS09030 PF05195 Aminopeptidase P, N-terminal domain SDZ_RS09030 PF00557 Metallopeptidase family M24 SDZ_RS09035 PF01432 Peptidase family M3 SDZ_RS09055 PF01040 UbiA prenyltransferase family SDZ_RS09070 PF02386 Cation transport protein SDZ_RS09075 PF02254 TrkA-N domain SDZ_RS09075 PF02080 TrkA-C domain SDZ_RS09080 PF01189 16S rRNA methyltransferase RsmB/F SDZ_RS09080 PF01029 NusB family SDZ_RS09085 PF00551 Formyl transferase SDZ_RS09085 PF02911 Formyl transferase, C-terminal domain SDZ_RS09090 PF01327 Polypeptide deformylase SDZ_RS09100 PF00731 AIR carboxylase SDZ_RS09105 PF01300 Telomere recombination SDZ_RS09110 PF01488 Shikimate / quinate 5-dehydrogenase SDZ_RS09110 PF08501 Shikimate dehydrogenase substrate binding domain SDZ_RS09110 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SDZ_RS09115 PF04445 Putative SAM-dependent methyltransferase SDZ_RS09130 PF01380 SIS domain SDZ_RS09135 PF12804 MobA-like NTP transferase domain SDZ_RS09135 PF00132 Bacterial transferase hexapeptide (six repeats) SDZ_RS09140 PF01790 Prolipoprotein diacylglyceryl transferase SDZ_RS09150 PF01648 4'-phosphopantetheinyl transferase superfamily SDZ_RS09155 PF14579 Helix-hairpin-helix motif SDZ_RS09155 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SDZ_RS09155 PF02811 PHP domain SDZ_RS09155 PF07733 Bacterial DNA polymerase III alpha NTPase domain SDZ_RS09155 PF01336 OB-fold nucleic acid binding domain SDZ_RS09175 PF03480 Bacterial extracellular solute-binding protein, family 7 SDZ_RS09180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SDZ_RS09180 PF03466 LysR substrate binding domain SDZ_RS09185 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SDZ_RS09185 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SDZ_RS09190 PF00293 NUDIX domain SDZ_RS09195 PF00580 UvrD/REP helicase N-terminal domain SDZ_RS09195 PF13361 UvrD-like helicase C-terminal domain SDZ_RS09200 PF08275 DNA primase catalytic core, N-terminal domain SDZ_RS09200 PF10410 DnaB-helicase binding domain of primase SDZ_RS09200 PF01807 CHC2 zinc finger SDZ_RS09205 PF00899 ThiF family SDZ_RS09260 PF01501 Glycosyl transferase family 8 SDZ_RS09265 PF06250 YhcG PDDEXK nuclease domain SDZ_RS09265 PF17761 DUF1016 N-terminal domain SDZ_RS09380 PF01471 Putative peptidoglycan binding domain SDZ_RS09380 PF13401 AAA domain SDZ_RS09390 PF01381 Helix-turn-helix SDZ_RS09400 PF03466 LysR substrate binding domain SDZ_RS09400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SDZ_RS09430 PF17191 RecG wedge domain SDZ_RS09430 PF00270 DEAD/DEAH box helicase SDZ_RS09430 PF13749 Putative ATP-dependent DNA helicase recG C-terminal SDZ_RS09475 PF00892 EamA-like transporter family SDZ_RS09480 PF04237 YjbR SDZ_RS09500 PF01584 CheW-like domain SDZ_RS09500 PF00072 Response regulator receiver domain SDZ_RS09510 PF01569 PAP2 superfamily SDZ_RS09570 PF01569 PAP2 superfamily SDZ_RS09580 PF02796 Helix-turn-helix domain of resolvase SDZ_RS09580 PF00239 Resolvase, N terminal domain SDZ_RS09585 PF01609 Transposase DDE domain SDZ_RS09615 PF01420 Type I restriction modification DNA specificity domain SDZ_RS09620 PF02384 N-6 DNA Methylase SDZ_RS09620 PF12161 HsdM N-terminal domain SDZ_RS09625 PF00271 Helicase conserved C-terminal domain SDZ_RS09625 PF04851 Type III restriction enzyme, res subunit SDZ_RS09625 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) SDZ_RS09625 PF08463 EcoEI R protein C-terminal SDZ_RS09640 PF10127 RNA repair pathway DNA polymerase beta family SDZ_RS09715 PF04973 Nicotinamide mononucleotide transporter SDZ_RS09725 PF00293 NUDIX domain SDZ_RS09730 PF03960 ArsC family SDZ_RS09735 PF00149 Calcineurin-like phosphoesterase SDZ_RS09755 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SDZ_RS09755 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SDZ_RS09805 PF13407 Periplasmic binding protein domain SDZ_RS09815 PF02733 Dak1 domain SDZ_RS09820 PF02734 DAK2 domain SDZ_RS09830 PF03401 Tripartite tricarboxylate transporter family receptor SDZ_RS09845 PF01081 KDPG and KHG aldolase SDZ_RS09850 PF00701 Dihydrodipicolinate synthetase family SDZ_RS09860 PF02653 Branched-chain amino acid transport system / permease component SDZ_RS09865 PF00005 ABC transporter SDZ_RS09880 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SDZ_RS09880 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SDZ_RS09885 PF00356 Bacterial regulatory proteins, lacI family SDZ_RS09900 PF01047 MarR family SDZ_RS09910 PF00085 Thioredoxin SDZ_RS09915 PF01047 MarR family SDZ_RS09920 PF00248 Aldo/keto reductase family SDZ_RS09935 PF13426 PAS domain SDZ_RS09935 PF00158 Sigma-54 interaction domain SDZ_RS09935 PF02954 Bacterial regulatory protein, Fis family SDZ_RS09960 PF08125 Mannitol dehydrogenase C-terminal domain SDZ_RS09960 PF01232 Mannitol dehydrogenase Rossmann domain SDZ_RS09965 PF08240 Alcohol dehydrogenase GroES-like domain SDZ_RS09965 PF00107 Zinc-binding dehydrogenase SDZ_RS09975 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SDZ_RS09975 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SDZ_RS09980 PF02653 Branched-chain amino acid transport system / permease component SDZ_RS09985 PF00005 ABC transporter SDZ_RS10010 PF00356 Bacterial regulatory proteins, lacI family SDZ_RS10015 PF00232 Glycosyl hydrolase family 1 SDZ_RS10025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SDZ_RS10030 PF00106 short chain dehydrogenase SDZ_RS10035 PF00691 OmpA family SDZ_RS10035 PF01389 OmpA-like transmembrane domain SDZ_RS10040 PF04231 Endonuclease I SDZ_RS10050 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SDZ_RS10060 PF03480 Bacterial extracellular solute-binding protein, family 7 SDZ_RS10065 PF02610 L-arabinose isomerase SDZ_RS10065 PF11762 L-arabinose isomerase C-terminal domain SDZ_RS10070 PF02653 Branched-chain amino acid transport system / permease component SDZ_RS10075 PF00005 ABC transporter SDZ_RS10095 PF13609 Gram-negative porin SDZ_RS10130 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS10130 PF09820 Predicted AAA-ATPase SDZ_RS10140 PF00209 Sodium:neurotransmitter symporter family SDZ_RS10145 PF00258 Flavodoxin SDZ_RS10165 PF00873 AcrB/AcrD/AcrF family SDZ_RS10170 PF00529 HlyD membrane-fusion protein of T1SS SDZ_RS10170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SDZ_RS10175 PF08361 MAATS-type transcriptional repressor, C-terminal region SDZ_RS10175 PF00440 Bacterial regulatory proteins, tetR family SDZ_RS10180 PF09820 Predicted AAA-ATPase SDZ_RS10180 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS10185 PF03061 Thioesterase superfamily SDZ_RS10195 PF01323 DSBA-like thioredoxin domain SDZ_RS10215 PF01553 Acyltransferase SDZ_RS10220 PF01063 Amino-transferase class IV SDZ_RS10225 PF00920 Dehydratase family SDZ_RS10230 PF00291 Pyridoxal-phosphate dependent enzyme SDZ_RS10230 PF00585 C-terminal regulatory domain of Threonine dehydratase SDZ_RS10245 PF07859 alpha/beta hydrolase fold SDZ_RS10255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SDZ_RS10255 PF03466 LysR substrate binding domain SDZ_RS10260 PF00691 OmpA family SDZ_RS10260 PF01389 OmpA-like transmembrane domain SDZ_RS10265 PF00691 OmpA family SDZ_RS10265 PF01389 OmpA-like transmembrane domain SDZ_RS10275 PF07282 Putative transposase DNA-binding domain SDZ_RS10275 PF12323 Helix-turn-helix domain SDZ_RS10275 PF01385 Probable transposase SDZ_RS10280 PF00733 Asparagine synthase SDZ_RS10280 PF13537 Glutamine amidotransferase domain SDZ_RS10285 PF01678 Diaminopimelate epimerase SDZ_RS10290 PF00155 Aminotransferase class I and II SDZ_RS10305 PF00120 Glutamine synthetase, catalytic domain SDZ_RS10305 PF03951 Glutamine synthetase, beta-Grasp domain SDZ_RS10310 PF00310 Glutamine amidotransferases class-II SDZ_RS10310 PF04898 Glutamate synthase central domain SDZ_RS10310 PF01645 Conserved region in glutamate synthase SDZ_RS10310 PF01493 GXGXG motif SDZ_RS10315 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDZ_RS10315 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SDZ_RS10325 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS10325 PF09820 Predicted AAA-ATPase SDZ_RS10330 PF01625 Peptide methionine sulfoxide reductase SDZ_RS10330 PF01641 SelR domain SDZ_RS10330 PF08534 Redoxin SDZ_RS10335 PF03180 NLPA lipoprotein SDZ_RS10340 PF07219 HemY protein N-terminus SDZ_RS10350 PF12633 Adenylate cyclase NT domain SDZ_RS10350 PF01295 Adenylate cyclase, class-I SDZ_RS10360 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SDZ_RS10360 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SDZ_RS10365 PF01678 Diaminopimelate epimerase SDZ_RS10385 PF00072 Response regulator receiver domain SDZ_RS10385 PF00196 Bacterial regulatory proteins, luxR family SDZ_RS10425 PF02899 Phage integrase, N-terminal SAM-like domain SDZ_RS10425 PF00589 Phage integrase family SDZ_RS10435 PF00580 UvrD/REP helicase N-terminal domain SDZ_RS10435 PF13361 UvrD-like helicase C-terminal domain SDZ_RS10440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SDZ_RS10445 PF03480 Bacterial extracellular solute-binding protein, family 7 SDZ_RS10450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SDZ_RS10450 PF07497 Rho termination factor, RNA-binding domain SDZ_RS10450 PF07498 Rho termination factor, N-terminal domain SDZ_RS10475 PF02470 MlaD protein SDZ_RS10480 PF04403 Paraquat-inducible protein A SDZ_RS10490 PF00085 Thioredoxin SDZ_RS10495 PF02592 Putative vitamin uptake transporter SDZ_RS10505 PF01612 3'-5' exonuclease SDZ_RS10505 PF00476 DNA polymerase family A SDZ_RS10505 PF01367 5'-3' exonuclease, C-terminal SAM fold SDZ_RS10505 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SDZ_RS10530 PF00149 Calcineurin-like phosphoesterase SDZ_RS10535 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SDZ_RS10540 PF09190 DALR domain SDZ_RS10540 PF01406 tRNA synthetases class I (C) catalytic domain SDZ_RS10545 PF11398 Protein of unknown function (DUF2813) SDZ_RS10550 PF08340 Domain of unknown function (DUF1732) SDZ_RS10550 PF03755 YicC-like family, N-terminal region SDZ_RS10555 PF00156 Phosphoribosyl transferase domain SDZ_RS10560 PF02677 Epoxyqueuosine reductase QueH SDZ_RS10570 PF00338 Ribosomal protein S10p/S20e SDZ_RS10575 PF00297 Ribosomal protein L3 SDZ_RS10580 PF00573 Ribosomal protein L4/L1 family SDZ_RS10585 PF00276 Ribosomal protein L23 SDZ_RS10590 PF00181 Ribosomal Proteins L2, RNA binding domain SDZ_RS10590 PF03947 Ribosomal Proteins L2, C-terminal domain SDZ_RS10595 PF00203 Ribosomal protein S19 SDZ_RS10600 PF00237 Ribosomal protein L22p/L17e SDZ_RS10605 PF07650 KH domain SDZ_RS10605 PF00189 Ribosomal protein S3, C-terminal domain SDZ_RS10610 PF00252 Ribosomal protein L16p/L10e SDZ_RS10615 PF00831 Ribosomal L29 protein SDZ_RS10620 PF00366 Ribosomal protein S17 SDZ_RS10625 PF00238 Ribosomal protein L14p/L23e SDZ_RS10630 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SDZ_RS10635 PF00281 Ribosomal protein L5 SDZ_RS10635 PF00673 ribosomal L5P family C-terminus SDZ_RS10640 PF00253 Ribosomal protein S14p/S29e SDZ_RS10645 PF00410 Ribosomal protein S8 SDZ_RS10650 PF00347 Ribosomal protein L6 SDZ_RS10655 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SDZ_RS10660 PF00333 Ribosomal protein S5, N-terminal domain SDZ_RS10660 PF03719 Ribosomal protein S5, C-terminal domain SDZ_RS10665 PF00327 Ribosomal protein L30p/L7e SDZ_RS10675 PF00344 SecY translocase SDZ_RS10680 PF00444 Ribosomal protein L36 SDZ_RS10685 PF00416 Ribosomal protein S13/S18 SDZ_RS10690 PF00411 Ribosomal protein S11 SDZ_RS10695 PF00163 Ribosomal protein S4/S9 N-terminal domain SDZ_RS10695 PF01479 S4 domain SDZ_RS10700 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SDZ_RS10700 PF01000 RNA polymerase Rpb3/RpoA insert domain SDZ_RS10700 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SDZ_RS10705 PF01196 Ribosomal protein L17 SDZ_RS10710 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SDZ_RS10710 PF01000 RNA polymerase Rpb3/RpoA insert domain SDZ_RS10710 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SDZ_RS10740 PF03466 LysR substrate binding domain SDZ_RS10740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SDZ_RS10750 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SDZ_RS10755 PF14602 Hexapeptide repeat of succinyl-transferase SDZ_RS10755 PF12464 Maltose acetyltransferase SDZ_RS10765 PF03989 DNA gyrase C-terminal domain, beta-propeller SDZ_RS10765 PF00521 DNA gyrase/topoisomerase IV, subunit A SDZ_RS10780 PF02325 YGGT family SDZ_RS10785 PF01168 Alanine racemase, N-terminal domain SDZ_RS10795 PF00990 Diguanylate cyclase, GGDEF domain SDZ_RS10805 PF00491 Arginase family SDZ_RS10810 PF17810 Arginine decarboxylase helical bundle domain SDZ_RS10810 PF17944 Arginine decarboxylase C-terminal helical extension SDZ_RS10810 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SDZ_RS10815 PF00586 AIR synthase related protein, N-terminal domain SDZ_RS10815 PF02769 AIR synthase related protein, C-terminal domain SDZ_RS10825 PF00308 Bacterial dnaA protein SDZ_RS10830 PF02261 Aspartate decarboxylase SDZ_RS10835 PF02569 Pantoate-beta-alanine ligase SDZ_RS10840 PF00669 Bacterial flagellin N-terminal helical region SDZ_RS10840 PF07196 Flagellin hook IN motif SDZ_RS10840 PF00700 Bacterial flagellin C-terminal helical region SDZ_RS10905 PF01435 Peptidase family M48 SDZ_RS10905 PF07720 Tetratricopeptide repeat SDZ_RS10910 PF01594 AI-2E family transporter SDZ_RS10915 PF06968 Biotin and Thiamin Synthesis associated domain SDZ_RS10915 PF04055 Radical SAM superfamily SDZ_RS10920 PF01569 PAP2 superfamily SDZ_RS10925 PF00085 Thioredoxin SDZ_RS10930 PF11893 Domain of unknown function (DUF3413) SDZ_RS10930 PF00884 Sulfatase SDZ_RS10955 PF02547 Queuosine biosynthesis protein SDZ_RS10960 PF01702 Queuine tRNA-ribosyltransferase SDZ_RS10965 PF01235 Sodium:alanine symporter family SDZ_RS10970 PF02574 Homocysteine S-methyltransferase SDZ_RS10995 PF02699 Preprotein translocase subunit SDZ_RS11000 PF13721 SecD export protein N-terminal TM region SDZ_RS11000 PF07549 SecD/SecF GG Motif SDZ_RS11000 PF02355 Protein export membrane protein SDZ_RS11005 PF02355 Protein export membrane protein SDZ_RS11005 PF07549 SecD/SecF GG Motif SDZ_RS11015 PF01022 Bacterial regulatory protein, arsR family SDZ_RS11020 PF00266 Aminotransferase class-V SDZ_RS11025 PF00883 Cytosol aminopeptidase family, catalytic domain SDZ_RS11025 PF12404 Peptidase SDZ_RS11030 PF02146 Sir2 family SDZ_RS11040 PF04055 Radical SAM superfamily SDZ_RS11050 PF04551 GcpE protein SDZ_RS11055 PF03129 Anticodon binding domain SDZ_RS11055 PF13393 Histidyl-tRNA synthetase SDZ_RS11060 PF09976 Tetratricopeptide repeat-like domain SDZ_RS11065 PF13360 PQQ-like domain SDZ_RS11070 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SDZ_RS11070 PF01926 50S ribosome-binding GTPase SDZ_RS11075 PF13407 Periplasmic binding protein domain SDZ_RS11115 PF12706 Beta-lactamase superfamily domain SDZ_RS11135 PF01048 Phosphorylase superfamily SDZ_RS11140 PF00483 Nucleotidyl transferase SDZ_RS11145 PF13286 Phosphohydrolase-associated domain SDZ_RS11145 PF01966 HD domain SDZ_RS11160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SDZ_RS11165 PF02568 Thiamine biosynthesis protein (ThiI) SDZ_RS11165 PF02926 THUMP domain SDZ_RS11175 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS11175 PF09820 Predicted AAA-ATPase SDZ_RS11180 PF09820 Predicted AAA-ATPase SDZ_RS11180 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS11185 PF02687 FtsX-like permease family SDZ_RS11185 PF12704 MacB-like periplasmic core domain SDZ_RS11190 PF00005 ABC transporter SDZ_RS11195 PF12704 MacB-like periplasmic core domain SDZ_RS11195 PF02687 FtsX-like permease family SDZ_RS11205 PF01409 tRNA synthetases class II core domain (F) SDZ_RS11205 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SDZ_RS11215 PF02609 Exonuclease VII small subunit SDZ_RS11220 PF00348 Polyprenyl synthetase SDZ_RS11225 PF02780 Transketolase, C-terminal domain SDZ_RS11225 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SDZ_RS11225 PF02779 Transketolase, pyrimidine binding domain SDZ_RS11230 PF04461 Protein of unknown function (DUF520) SDZ_RS11235 PF07690 Major Facilitator Superfamily SDZ_RS11330 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) SDZ_RS11330 PF11973 NQRA C-terminal domain SDZ_RS11335 PF03116 NQR2, RnfD, RnfE family SDZ_RS11340 PF04205 FMN-binding domain SDZ_RS11345 PF02508 Rnf-Nqr subunit, membrane protein SDZ_RS11350 PF02508 Rnf-Nqr subunit, membrane protein SDZ_RS11355 PF00175 Oxidoreductase NAD-binding domain SDZ_RS11355 PF00111 2Fe-2S iron-sulfur cluster binding domain SDZ_RS11355 PF00970 Oxidoreductase FAD-binding domain SDZ_RS11405 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS11405 PF09820 Predicted AAA-ATPase SDZ_RS11420 PF00557 Metallopeptidase family M24 SDZ_RS11430 PF12706 Beta-lactamase superfamily domain SDZ_RS11430 PF00753 Metallo-beta-lactamase superfamily SDZ_RS11435 PF03749 Sugar fermentation stimulation protein RE domain SDZ_RS11435 PF17746 SfsA N-terminal OB domain SDZ_RS11440 PF00318 Ribosomal protein S2 SDZ_RS11445 PF00889 Elongation factor TS SDZ_RS11450 PF00696 Amino acid kinase family SDZ_RS11455 PF01765 Ribosome recycling factor SDZ_RS11460 PF01255 Putative undecaprenyl diphosphate synthase SDZ_RS11470 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SDZ_RS11470 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SDZ_RS11470 PF13288 DXP reductoisomerase C-terminal domain SDZ_RS11475 PF17820 PDZ domain SDZ_RS11475 PF02163 Peptidase family M50 SDZ_RS11480 PF07244 Surface antigen variable number repeat SDZ_RS11480 PF01103 Surface antigen SDZ_RS11490 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD SDZ_RS11490 PF00132 Bacterial transferase hexapeptide (six repeats) SDZ_RS11495 PF07977 FabA-like domain SDZ_RS11500 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SDZ_RS11500 PF00132 Bacterial transferase hexapeptide (six repeats) SDZ_RS11505 PF02684 Lipid-A-disaccharide synthetase SDZ_RS11510 PF01351 Ribonuclease HII SDZ_RS11515 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SDZ_RS11520 PF11734 TilS substrate C-terminal domain SDZ_RS11520 PF09179 TilS substrate binding domain SDZ_RS11520 PF01171 PP-loop family SDZ_RS11530 PF13407 Periplasmic binding protein domain SDZ_RS11535 PF13407 Periplasmic binding protein domain SDZ_RS11545 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SDZ_RS11545 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SDZ_RS11550 PF01053 Cys/Met metabolism PLP-dependent enzyme SDZ_RS11560 PF00884 Sulfatase SDZ_RS11570 PF13180 PDZ domain SDZ_RS11580 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS11580 PF09820 Predicted AAA-ATPase SDZ_RS11590 PF00011 Hsp20/alpha crystallin family SDZ_RS11600 PF00011 Hsp20/alpha crystallin family SDZ_RS11605 PF00595 PDZ domain SDZ_RS11615 PF01979 Amidohydrolase family SDZ_RS11625 PF00155 Aminotransferase class I and II SDZ_RS11665 PF01081 KDPG and KHG aldolase SDZ_RS11670 PF00294 pfkB family carbohydrate kinase SDZ_RS11675 PF08666 SAF domain SDZ_RS11675 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus SDZ_RS11680 PF08125 Mannitol dehydrogenase C-terminal domain SDZ_RS11680 PF01232 Mannitol dehydrogenase Rossmann domain SDZ_RS11685 PF00107 Zinc-binding dehydrogenase SDZ_RS11685 PF08240 Alcohol dehydrogenase GroES-like domain SDZ_RS11690 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SDZ_RS11690 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component SDZ_RS11700 PF03480 Bacterial extracellular solute-binding protein, family 7 SDZ_RS11705 PF00158 Sigma-54 interaction domain SDZ_RS11705 PF13426 PAS domain SDZ_RS11705 PF02954 Bacterial regulatory protein, Fis family SDZ_RS11710 PF09820 Predicted AAA-ATPase SDZ_RS11710 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS11725 PF01638 HxlR-like helix-turn-helix SDZ_RS11745 PF01695 IstB-like ATP binding protein SDZ_RS11775 PF01261 Xylose isomerase-like TIM barrel SDZ_RS11780 PF13407 Periplasmic binding protein domain SDZ_RS11790 PF02653 Branched-chain amino acid transport system / permease component SDZ_RS11795 PF01380 SIS domain SDZ_RS11795 PF01418 Helix-turn-helix domain, rpiR family SDZ_RS11810 PF00158 Sigma-54 interaction domain SDZ_RS11810 PF13426 PAS domain SDZ_RS11810 PF02954 Bacterial regulatory protein, Fis family SDZ_RS11815 PF00294 pfkB family carbohydrate kinase SDZ_RS11820 PF01081 KDPG and KHG aldolase SDZ_RS11825 PF03480 Bacterial extracellular solute-binding protein, family 7 SDZ_RS11835 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SDZ_RS11840 PF02614 Glucuronate isomerase SDZ_RS11845 PF03786 D-mannonate dehydratase (UxuA) SDZ_RS11850 PF08125 Mannitol dehydrogenase C-terminal domain SDZ_RS11850 PF01232 Mannitol dehydrogenase Rossmann domain SDZ_RS11860 PF00572 Ribosomal protein L13 SDZ_RS11865 PF00380 Ribosomal protein S9/S16 SDZ_RS11870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDZ_RS11880 PF11798 IMS family HHH motif SDZ_RS11880 PF00817 impB/mucB/samB family SDZ_RS11880 PF11799 impB/mucB/samB family C-terminal domain SDZ_RS11890 PF04386 Stringent starvation protein B SDZ_RS11900 PF04348 LppC putative lipoprotein SDZ_RS11905 PF01427 D-ala-D-ala dipeptidase SDZ_RS11915 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SDZ_RS11935 PF07690 Major Facilitator Superfamily SDZ_RS11940 PF12833 Helix-turn-helix domain SDZ_RS11955 PF01177 Asp/Glu/Hydantoin racemase SDZ_RS11960 PF16868 NMT1-like family SDZ_RS11965 PF02381 MraZ protein, putative antitoxin-like SDZ_RS11970 PF01795 MraW methylase family SDZ_RS11980 PF00905 Penicillin binding protein transpeptidase domain SDZ_RS11980 PF03717 Penicillin-binding Protein dimerisation domain SDZ_RS11985 PF01225 Mur ligase family, catalytic domain SDZ_RS11985 PF02875 Mur ligase family, glutamate ligase domain SDZ_RS11985 PF08245 Mur ligase middle domain SDZ_RS11990 PF02875 Mur ligase family, glutamate ligase domain SDZ_RS11990 PF08245 Mur ligase middle domain SDZ_RS11990 PF01225 Mur ligase family, catalytic domain SDZ_RS11995 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SDZ_RS11995 PF00953 Glycosyl transferase family 4 SDZ_RS12000 PF08245 Mur ligase middle domain SDZ_RS12000 PF02875 Mur ligase family, glutamate ligase domain SDZ_RS12005 PF01098 Cell cycle protein SDZ_RS12010 PF03033 Glycosyltransferase family 28 N-terminal domain SDZ_RS12010 PF04101 Glycosyltransferase family 28 C-terminal domain SDZ_RS12015 PF08245 Mur ligase middle domain SDZ_RS12015 PF02875 Mur ligase family, glutamate ligase domain SDZ_RS12015 PF01225 Mur ligase family, catalytic domain SDZ_RS12020 PF03799 Cell division protein FtsQ SDZ_RS12020 PF08478 POTRA domain, FtsQ-type SDZ_RS12025 PF02491 SHS2 domain inserted in FTSA SDZ_RS12030 PF12327 FtsZ family, C-terminal domain SDZ_RS12030 PF00091 Tubulin/FtsZ family, GTPase domain SDZ_RS12050 PF12327 FtsZ family, C-terminal domain SDZ_RS12050 PF00091 Tubulin/FtsZ family, GTPase domain SDZ_RS12055 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase SDZ_RS12060 PF01510 N-acetylmuramoyl-L-alanine amidase SDZ_RS12065 PF00330 Aconitase family (aconitate hydratase) SDZ_RS12065 PF06434 Aconitate hydratase 2 N-terminus SDZ_RS12065 PF11791 Aconitate B N-terminal domain SDZ_RS12070 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SDZ_RS12070 PF00056 lactate/malate dehydrogenase, NAD binding domain SDZ_RS12080 PF08238 Sel1 repeat SDZ_RS12085 PF12729 Four helix bundle sensory module for signal transduction SDZ_RS12085 PF00672 HAMP domain SDZ_RS12085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDZ_RS12090 PF01554 MatE SDZ_RS12095 PF07687 Peptidase dimerisation domain SDZ_RS12095 PF01546 Peptidase family M20/M25/M40 SDZ_RS12100 PF03180 NLPA lipoprotein SDZ_RS12105 PF00005 ABC transporter SDZ_RS12105 PF09383 NIL domain SDZ_RS12110 PF00528 Binding-protein-dependent transport system inner membrane component SDZ_RS12115 PF00448 SRP54-type protein, GTPase domain SDZ_RS12115 PF02881 SRP54-type protein, helical bundle domain SDZ_RS12115 PF02978 Signal peptide binding domain SDZ_RS12130 PF00886 Ribosomal protein S16 SDZ_RS12135 PF01782 RimM N-terminal domain SDZ_RS12135 PF05239 PRC-barrel domain SDZ_RS12140 PF01746 tRNA (Guanine-1)-methyltransferase SDZ_RS12145 PF01245 Ribosomal protein L19 SDZ_RS12160 PF01569 PAP2 superfamily SDZ_RS12215 PF02976 DNA mismatch repair enzyme MutH SDZ_RS12220 PF00293 NUDIX domain SDZ_RS12225 PF01590 GAF domain SDZ_RS12225 PF05524 PEP-utilising enzyme, N-terminal SDZ_RS12225 PF00391 PEP-utilising enzyme, mobile domain SDZ_RS12225 PF02896 PEP-utilising enzyme, TIM barrel domain SDZ_RS12230 PF00303 Thymidylate synthase SDZ_RS12235 PF03937 Flavinator of succinate dehydrogenase SDZ_RS12240 PF00271 Helicase conserved C-terminal domain SDZ_RS12240 PF00270 DEAD/DEAH box helicase SDZ_RS12245 PF01979 Amidohydrolase family SDZ_RS12250 PF01380 SIS domain SDZ_RS12250 PF01418 Helix-turn-helix domain, rpiR family SDZ_RS12255 PF00248 Aldo/keto reductase family SDZ_RS12275 PF00465 Iron-containing alcohol dehydrogenase SDZ_RS12295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SDZ_RS12295 PF03466 LysR substrate binding domain SDZ_RS12300 PF00248 Aldo/keto reductase family SDZ_RS12305 PF00248 Aldo/keto reductase family SDZ_RS12310 PF00440 Bacterial regulatory proteins, tetR family SDZ_RS12315 PF00534 Glycosyl transferases group 1 SDZ_RS12315 PF08323 Starch synthase catalytic domain SDZ_RS12320 PF00483 Nucleotidyl transferase SDZ_RS12330 PF01661 Macro domain SDZ_RS12335 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SDZ_RS12335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SDZ_RS12365 PF08468 Methyltransferase small domain N-terminal SDZ_RS12365 PF05175 Methyltransferase small domain SDZ_RS12370 PF00398 Ribosomal RNA adenine dimethylase SDZ_RS12375 PF09312 SurA N-terminal domain SDZ_RS12380 PF04453 LPS transport system D SDZ_RS12380 PF03968 OstA-like protein SDZ_RS12385 PF03884 DNA gyrase inhibitor YacG SDZ_RS12390 PF07072 Cell division protein SDZ_RS12395 PF01121 Dephospho-CoA kinase SDZ_RS12405 PF00589 Phage integrase family SDZ_RS12405 PF02899 Phage integrase, N-terminal SAM-like domain SDZ_RS12420 PF12706 Beta-lactamase superfamily domain SDZ_RS12425 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SDZ_RS12425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SDZ_RS12430 PF00586 AIR synthase related protein, N-terminal domain SDZ_RS12430 PF02769 AIR synthase related protein, C-terminal domain SDZ_RS12435 PF01029 NusB family SDZ_RS12440 PF00885 6,7-dimethyl-8-ribityllumazine synthase SDZ_RS12445 PF00677 Lumazine binding domain SDZ_RS12450 PF01872 RibD C-terminal domain SDZ_RS12450 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SDZ_RS12455 PF00464 Serine hydroxymethyltransferase SDZ_RS12470 PF03466 LysR substrate binding domain SDZ_RS12470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SDZ_RS12505 PF01220 Dehydroquinase class II SDZ_RS12510 PF00364 Biotin-requiring enzyme SDZ_RS12515 PF02785 Biotin carboxylase C-terminal domain SDZ_RS12515 PF00289 Biotin carboxylase, N-terminal domain SDZ_RS12515 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SDZ_RS12520 PF11412 Disulphide bond corrector protein DsbC SDZ_RS12520 PF02683 Cytochrome C biogenesis protein transmembrane region SDZ_RS12570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDZ_RS12570 PF00672 HAMP domain SDZ_RS12570 PF12729 Four helix bundle sensory module for signal transduction SDZ_RS12585 PF01156 Inosine-uridine preferring nucleoside hydrolase SDZ_RS12590 PF00436 Single-strand binding protein family SDZ_RS12595 PF01554 MatE SDZ_RS12600 PF00166 Chaperonin 10 Kd subunit SDZ_RS12605 PF00118 TCP-1/cpn60 chaperonin family SDZ_RS12620 PF13411 MerR HTH family regulatory protein SDZ_RS12625 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SDZ_RS12630 PF00465 Iron-containing alcohol dehydrogenase SDZ_RS12640 PF02548 Ketopantoate hydroxymethyltransferase SDZ_RS12650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDZ_RS12650 PF12729 Four helix bundle sensory module for signal transduction SDZ_RS12650 PF00672 HAMP domain SDZ_RS12655 PF00497 Bacterial extracellular solute-binding proteins, family 3 SDZ_RS12670 PF00497 Bacterial extracellular solute-binding proteins, family 3 SDZ_RS12675 PF00497 Bacterial extracellular solute-binding proteins, family 3 SDZ_RS12685 PF01638 HxlR-like helix-turn-helix SDZ_RS12690 PF00465 Iron-containing alcohol dehydrogenase SDZ_RS12695 PF02525 Flavodoxin-like fold SDZ_RS12705 PF00005 ABC transporter SDZ_RS12705 PF12848 ABC transporter SDZ_RS12710 PF07196 Flagellin hook IN motif SDZ_RS12710 PF00700 Bacterial flagellin C-terminal helical region SDZ_RS12710 PF00669 Bacterial flagellin N-terminal helical region SDZ_RS12715 PF03306 Alpha-acetolactate decarboxylase SDZ_RS12720 PF00672 HAMP domain SDZ_RS12720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDZ_RS12720 PF12729 Four helix bundle sensory module for signal transduction SDZ_RS12725 PF03605 Anaerobic c4-dicarboxylate membrane transporter SDZ_RS12730 PF01668 SmpB protein SDZ_RS12735 PF01740 STAS domain SDZ_RS12735 PF00916 Sulfate permease family SDZ_RS12745 PF00589 Phage integrase family SDZ_RS12745 PF13356 Arm DNA-binding domain SDZ_RS12865 PF10711 Hypothetical protein (DUF2513) SDZ_RS12935 PF00574 Clp protease SDZ_RS13125 PF13382 Adenine deaminase C-terminal domain SDZ_RS13125 PF01979 Amidohydrolase family SDZ_RS13165 PF00672 HAMP domain SDZ_RS13165 PF07228 Stage II sporulation protein E (SpoIIE) SDZ_RS13170 PF01206 Sulfurtransferase TusA SDZ_RS13180 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SDZ_RS13195 PF18429 Domain of unknown function (DUF5609) SDZ_RS13200 PF18073 Rubredoxin metal binding domain SDZ_RS13205 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ SDZ_RS13215 PF00005 ABC transporter SDZ_RS13215 PF06472 ABC transporter transmembrane region 2 SDZ_RS13225 PF04225 Opacity-associated protein A LysM-like domain SDZ_RS13225 PF01551 Peptidase family M23 SDZ_RS13240 PF02843 Phosphoribosylglycinamide synthetase, C domain SDZ_RS13240 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SDZ_RS13240 PF02844 Phosphoribosylglycinamide synthetase, N domain SDZ_RS13245 PF01808 AICARFT/IMPCHase bienzyme SDZ_RS13245 PF02142 MGS-like domain SDZ_RS13250 PF00216 Bacterial DNA-binding protein SDZ_RS13255 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SDZ_RS13255 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SDZ_RS13255 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SDZ_RS13255 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SDZ_RS13265 PF00497 Bacterial extracellular solute-binding proteins, family 3 SDZ_RS13275 PF01235 Sodium:alanine symporter family SDZ_RS13280 PF01966 HD domain SDZ_RS13285 PF09335 SNARE associated Golgi protein SDZ_RS13290 PF00588 SpoU rRNA Methylase family SDZ_RS13295 PF17854 FtsK alpha domain SDZ_RS13295 PF09397 Ftsk gamma domain SDZ_RS13295 PF01580 FtsK/SpoIIIE family SDZ_RS13300 PF03548 Outer membrane lipoprotein carrier protein LolA SDZ_RS13305 PF12002 MgsA AAA+ ATPase C terminal SDZ_RS13305 PF00004 ATPase family associated with various cellular activities (AAA) SDZ_RS13305 PF16193 AAA C-terminal domain SDZ_RS13310 PF02403 Seryl-tRNA synthetase N-terminal domain SDZ_RS13310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SDZ_RS13315 PF02674 Colicin V production protein SDZ_RS13320 PF00156 Phosphoribosyl transferase domain SDZ_RS13335 PF00581 Rhodanese-like domain SDZ_RS13350 PF02824 TGS domain SDZ_RS13350 PF03129 Anticodon binding domain SDZ_RS13350 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SDZ_RS13350 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SDZ_RS13355 PF00707 Translation initiation factor IF-3, C-terminal domain SDZ_RS13355 PF05198 Translation initiation factor IF-3, N-terminal domain SDZ_RS13360 PF01632 Ribosomal protein L35 SDZ_RS13365 PF00453 Ribosomal protein L20 SDZ_RS13385 PF01313 Bacterial export proteins, family 3 SDZ_RS13390 PF01311 Bacterial export proteins, family 1 SDZ_RS13400 PF01790 Prolipoprotein diacylglyceryl transferase SDZ_RS13405 PF01740 STAS domain SDZ_RS13415 PF00672 HAMP domain SDZ_RS13415 PF07228 Stage II sporulation protein E (SpoIIE) SDZ_RS13435 PF01312 FlhB HrpN YscU SpaS Family SDZ_RS13460 PF00771 FHIPEP family SDZ_RS13485 PF00263 Bacterial type II and III secretion system protein SDZ_RS13485 PF03958 Bacterial type II/III secretion system short domain SDZ_RS13515 PF03616 Sodium/glutamate symporter SDZ_RS13525 PF05872 Bacterial protein of unknown function (DUF853) SDZ_RS13530 PF01514 Secretory protein of YscJ/FliF family SDZ_RS13540 PF02108 Flagellar assembly protein FliH SDZ_RS13545 PF18269 T3SS EscN ATPase C-terminal domain SDZ_RS13545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SDZ_RS13545 PF02874 ATP synthase alpha/beta family, beta-barrel domain SDZ_RS13550 PF01464 Transglycosylase SLT domain SDZ_RS13555 PF01740 STAS domain SDZ_RS13560 PF01609 Transposase DDE domain SDZ_RS13575 PF00375 Sodium:dicarboxylate symporter family SDZ_RS13580 PF09820 Predicted AAA-ATPase SDZ_RS13580 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS13590 PF01471 Putative peptidoglycan binding domain SDZ_RS13590 PF13401 AAA domain SDZ_RS13615 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SDZ_RS13620 PF00813 FliP family SDZ_RS13625 PF00285 Citrate synthase, C-terminal domain SDZ_RS13630 PF01842 ACT domain SDZ_RS13630 PF00551 Formyl transferase SDZ_RS13635 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region SDZ_RS13635 PF01243 Pyridoxamine 5'-phosphate oxidase SDZ_RS13640 PF00871 Acetokinase family SDZ_RS13650 PF00128 Alpha amylase, catalytic domain SDZ_RS13650 PF02903 Alpha amylase, N-terminal ig-like domain SDZ_RS13655 PF07687 Peptidase dimerisation domain SDZ_RS13655 PF01546 Peptidase family M20/M25/M40 SDZ_RS13660 PF01174 SNO glutamine amidotransferase family SDZ_RS13665 PF01680 SOR/SNZ family SDZ_RS13670 PF00155 Aminotransferase class I and II SDZ_RS13670 PF00392 Bacterial regulatory proteins, gntR family SDZ_RS13675 PF00582 Universal stress protein family SDZ_RS13695 PF03023 Lipid II flippase MurJ SDZ_RS13705 PF01472 PUA domain SDZ_RS13705 PF00696 Amino acid kinase family SDZ_RS13710 PF00171 Aldehyde dehydrogenase family SDZ_RS13730 PF04333 MlaA lipoprotein SDZ_RS13735 PF01817 Chorismate mutase type II SDZ_RS13735 PF02153 Prephenate dehydrogenase SDZ_RS13745 PF01435 Peptidase family M48 SDZ_RS13750 PF08666 SAF domain SDZ_RS13750 PF03102 NeuB family SDZ_RS13760 PF13407 Periplasmic binding protein domain SDZ_RS13770 PF12729 Four helix bundle sensory module for signal transduction SDZ_RS13770 PF00672 HAMP domain SDZ_RS13770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDZ_RS13775 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SDZ_RS13775 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SDZ_RS13780 PF02446 4-alpha-glucanotransferase SDZ_RS13785 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SDZ_RS13785 PF00128 Alpha amylase, catalytic domain SDZ_RS13785 PF02806 Alpha amylase, C-terminal all-beta domain SDZ_RS13790 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SDZ_RS13790 PF00128 Alpha amylase, catalytic domain SDZ_RS13795 PF01343 Peptidase family S49 SDZ_RS13800 PF01145 SPFH domain / Band 7 family SDZ_RS13815 PF00478 IMP dehydrogenase / GMP reductase domain SDZ_RS13815 PF00571 CBS domain SDZ_RS13820 PF00117 Glutamine amidotransferase class-I SDZ_RS13820 PF00958 GMP synthase C terminal domain SDZ_RS13820 PF02540 NAD synthase SDZ_RS13835 PF00529 HlyD membrane-fusion protein of T1SS SDZ_RS13835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SDZ_RS13840 PF00873 AcrB/AcrD/AcrF family SDZ_RS13845 PF00881 Nitroreductase family SDZ_RS13855 PF00328 Histidine phosphatase superfamily (branch 2) SDZ_RS13885 PF00497 Bacterial extracellular solute-binding proteins, family 3 SDZ_RS13890 PF00497 Bacterial extracellular solute-binding proteins, family 3 SDZ_RS13895 PF07282 Putative transposase DNA-binding domain SDZ_RS13895 PF12323 Helix-turn-helix domain SDZ_RS13895 PF01385 Probable transposase SDZ_RS13900 PF02938 GAD domain SDZ_RS13900 PF01336 OB-fold nucleic acid binding domain SDZ_RS13900 PF00152 tRNA synthetases class II (D, K and N) SDZ_RS13905 PF01709 Transcriptional regulator SDZ_RS13910 PF04546 Sigma-70, non-essential region SDZ_RS13910 PF03979 Sigma-70 factor, region 1.1 SDZ_RS13910 PF00140 Sigma-70 factor, region 1.2 SDZ_RS13910 PF04542 Sigma-70 region 2 SDZ_RS13910 PF04539 Sigma-70 region 3 SDZ_RS13910 PF04545 Sigma-70, region 4 SDZ_RS13920 PF00939 Sodium:sulfate symporter transmembrane region SDZ_RS13925 PF03466 LysR substrate binding domain SDZ_RS13925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SDZ_RS13930 PF00561 alpha/beta hydrolase fold SDZ_RS13935 PF02685 Glucokinase SDZ_RS13950 PF03180 NLPA lipoprotein SDZ_RS13960 PF03180 NLPA lipoprotein SDZ_RS13965 PF09383 NIL domain SDZ_RS13965 PF00005 ABC transporter SDZ_RS13970 PF00528 Binding-protein-dependent transport system inner membrane component SDZ_RS13980 PF03180 NLPA lipoprotein SDZ_RS14020 PF00365 Phosphofructokinase SDZ_RS14025 PF00121 Triosephosphate isomerase SDZ_RS14035 PF00696 Amino acid kinase family SDZ_RS14035 PF03447 Homoserine dehydrogenase, NAD binding domain SDZ_RS14035 PF00742 Homoserine dehydrogenase SDZ_RS14035 PF01842 ACT domain SDZ_RS14035 PF13840 ACT domain SDZ_RS14040 PF08544 GHMP kinases C terminal SDZ_RS14040 PF00288 GHMP kinases N terminal domain SDZ_RS14045 PF00291 Pyridoxal-phosphate dependent enzyme SDZ_RS14045 PF14821 Threonine synthase N terminus SDZ_RS14050 PF12323 Helix-turn-helix domain SDZ_RS14050 PF07282 Putative transposase DNA-binding domain SDZ_RS14050 PF01385 Probable transposase SDZ_RS14060 PF00375 Sodium:dicarboxylate symporter family SDZ_RS14065 PF07664 Ferrous iron transport protein B C terminus SDZ_RS14065 PF17910 FeoB cytosolic helical domain SDZ_RS14065 PF04023 FeoA domain SDZ_RS14065 PF02421 Ferrous iron transport protein B SDZ_RS14065 PF07670 Nucleoside recognition SDZ_RS14070 PF07664 Ferrous iron transport protein B C terminus SDZ_RS14070 PF17910 FeoB cytosolic helical domain SDZ_RS14070 PF02421 Ferrous iron transport protein B SDZ_RS14070 PF07670 Nucleoside recognition SDZ_RS14080 PF00403 Heavy-metal-associated domain SDZ_RS14100 PF01695 IstB-like ATP binding protein SDZ_RS14120 PF00403 Heavy-metal-associated domain SDZ_RS14125 PF01037 Lrp/AsnC ligand binding domain SDZ_RS14130 PF04324 BFD-like [2Fe-2S] binding domain SDZ_RS14130 PF01592 NifU-like N terminal domain SDZ_RS14130 PF01106 NifU-like domain SDZ_RS14135 PF00266 Aminotransferase class-V SDZ_RS14155 PF17158 Membrane-associated sensor, integral membrane domain SDZ_RS14155 PF00990 Diguanylate cyclase, GGDEF domain SDZ_RS14160 PF00990 Diguanylate cyclase, GGDEF domain SDZ_RS14160 PF13185 GAF domain SDZ_RS14165 PF00990 Diguanylate cyclase, GGDEF domain SDZ_RS14175 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SDZ_RS14190 PF07690 Major Facilitator Superfamily SDZ_RS14205 PF00589 Phage integrase family SDZ_RS14205 PF02899 Phage integrase, N-terminal SAM-like domain SDZ_RS14210 PF00589 Phage integrase family SDZ_RS14270 PF00290 Tryptophan synthase alpha chain SDZ_RS14275 PF00291 Pyridoxal-phosphate dependent enzyme SDZ_RS14280 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SDZ_RS14280 PF00218 Indole-3-glycerol phosphate synthase SDZ_RS14285 PF02885 Glycosyl transferase family, helical bundle domain SDZ_RS14285 PF00591 Glycosyl transferase family, a/b domain SDZ_RS14295 PF09820 Predicted AAA-ATPase SDZ_RS14295 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS14300 PF17191 RecG wedge domain SDZ_RS14300 PF13749 Putative ATP-dependent DNA helicase recG C-terminal SDZ_RS14300 PF00270 DEAD/DEAH box helicase SDZ_RS14310 PF01385 Probable transposase SDZ_RS14310 PF07282 Putative transposase DNA-binding domain SDZ_RS14310 PF12323 Helix-turn-helix domain SDZ_RS14315 PF00308 Bacterial dnaA protein SDZ_RS14315 PF11638 DnaA N-terminal domain SDZ_RS14315 PF08299 Bacterial dnaA protein helix-turn-helix SDZ_RS14320 PF00117 Glutamine amidotransferase class-I SDZ_RS14325 PF00425 chorismate binding enzyme SDZ_RS14325 PF04715 Anthranilate synthase component I, N terminal region SDZ_RS14345 PF01336 OB-fold nucleic acid binding domain SDZ_RS14345 PF00152 tRNA synthetases class II (D, K and N) SDZ_RS14370 PF00293 NUDIX domain SDZ_RS14375 PF01544 CorA-like Mg2+ transporter protein SDZ_RS14380 PF00392 Bacterial regulatory proteins, gntR family SDZ_RS14380 PF07729 FCD domain SDZ_RS14390 PF02659 Putative manganese efflux pump SDZ_RS14395 PF07670 Nucleoside recognition SDZ_RS14395 PF07662 Na+ dependent nucleoside transporter C-terminus SDZ_RS14395 PF01773 Na+ dependent nucleoside transporter N-terminus SDZ_RS14400 PF00485 Phosphoribulokinase / Uridine kinase family SDZ_RS14410 PF00216 Bacterial DNA-binding protein SDZ_RS14415 PF00375 Sodium:dicarboxylate symporter family SDZ_RS14440 PF12833 Helix-turn-helix domain SDZ_RS14450 PF00128 Alpha amylase, catalytic domain SDZ_RS14450 PF16657 Maltogenic Amylase, C-terminal domain SDZ_RS14455 PF03600 Citrate transporter SDZ_RS14460 PF10672 S-adenosylmethionine-dependent methyltransferase SDZ_RS14460 PF02926 THUMP domain SDZ_RS14460 PF01170 Putative RNA methylase family UPF0020 SDZ_RS14470 PF02811 PHP domain SDZ_RS14480 PF01219 Prokaryotic diacylglycerol kinase SDZ_RS14485 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SDZ_RS14495 PF01300 Telomere recombination SDZ_RS14510 PF03590 Aspartate-ammonia ligase SDZ_RS14520 PF13426 PAS domain SDZ_RS14520 PF00563 EAL domain SDZ_RS14520 PF00990 Diguanylate cyclase, GGDEF domain SDZ_RS14525 PF07694 5TMR of 5TMR-LYT SDZ_RS14525 PF00990 Diguanylate cyclase, GGDEF domain SDZ_RS14535 PF04381 Putative exonuclease, RdgC SDZ_RS14540 PF03989 DNA gyrase C-terminal domain, beta-propeller SDZ_RS14540 PF00521 DNA gyrase/topoisomerase IV, subunit A SDZ_RS14545 PF00266 Aminotransferase class-V SDZ_RS14550 PF00501 AMP-binding enzyme SDZ_RS14550 PF13193 AMP-binding enzyme C-terminal domain SDZ_RS14555 PF01612 3'-5' exonuclease SDZ_RS14555 PF00570 HRDC domain SDZ_RS14560 PF00474 Sodium:solute symporter family SDZ_RS14585 PF03466 LysR substrate binding domain SDZ_RS14585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SDZ_RS14590 PF02525 Flavodoxin-like fold SDZ_RS14605 PF00436 Single-strand binding protein family SDZ_RS14615 PF03553 Na+/H+ antiporter family SDZ_RS14620 PF01385 Probable transposase SDZ_RS14620 PF12323 Helix-turn-helix domain SDZ_RS14620 PF07282 Putative transposase DNA-binding domain SDZ_RS14635 PF14572 Phosphoribosyl synthetase-associated domain SDZ_RS14635 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SDZ_RS14645 PF13173 AAA domain SDZ_RS14645 PF13635 Domain of unknown function (DUF4143) SDZ_RS14655 PF00528 Binding-protein-dependent transport system inner membrane component SDZ_RS14660 PF00528 Binding-protein-dependent transport system inner membrane component SDZ_RS14665 PF08402 TOBE domain SDZ_RS14665 PF00005 ABC transporter SDZ_RS14670 PF00465 Iron-containing alcohol dehydrogenase SDZ_RS14680 PF04225 Opacity-associated protein A LysM-like domain SDZ_RS14680 PF01551 Peptidase family M23 SDZ_RS14685 PF00464 Serine hydroxymethyltransferase SDZ_RS14690 PF01207 Dihydrouridine synthase (Dus) SDZ_RS14695 PF00248 Aldo/keto reductase family SDZ_RS14705 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS14705 PF09820 Predicted AAA-ATPase SDZ_RS14710 PF01386 Ribosomal L25p family SDZ_RS14715 PF13509 S1 domain SDZ_RS14715 PF17783 CvfB-like winged helix domain SDZ_RS14720 PF08496 Peptidase family S49 N-terminal SDZ_RS14720 PF01343 Peptidase family S49 SDZ_RS14725 PF01396 Topoisomerase DNA binding C4 zinc finger SDZ_RS14725 PF01751 Toprim domain SDZ_RS14725 PF01131 DNA topoisomerase SDZ_RS14725 PF08272 Topoisomerase I zinc-ribbon-like SDZ_RS14730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDZ_RS14730 PF00672 HAMP domain SDZ_RS14730 PF12729 Four helix bundle sensory module for signal transduction SDZ_RS14745 PF02222 ATP-grasp domain SDZ_RS14750 PF01451 Low molecular weight phosphotyrosine protein phosphatase SDZ_RS14780 PF07282 Putative transposase DNA-binding domain SDZ_RS14780 PF12323 Helix-turn-helix domain SDZ_RS14780 PF01385 Probable transposase SDZ_RS14795 PF13407 Periplasmic binding protein domain SDZ_RS14805 PF00109 Beta-ketoacyl synthase, N-terminal domain SDZ_RS14805 PF02801 Beta-ketoacyl synthase, C-terminal domain SDZ_RS14815 PF07977 FabA-like domain SDZ_RS14820 PF00109 Beta-ketoacyl synthase, N-terminal domain SDZ_RS14820 PF02801 Beta-ketoacyl synthase, C-terminal domain SDZ_RS14855 PF07977 FabA-like domain SDZ_RS14860 PF13193 AMP-binding enzyme C-terminal domain SDZ_RS14860 PF00501 AMP-binding enzyme SDZ_RS14870 PF00550 Phosphopantetheine attachment site SDZ_RS14875 PF00550 Phosphopantetheine attachment site SDZ_RS14895 PF09820 Predicted AAA-ATPase SDZ_RS14895 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS14900 PF08011 PD-(D/E)XK nuclease superfamily SDZ_RS14900 PF09820 Predicted AAA-ATPase SDZ_RS14915 PF00271 Helicase conserved C-terminal domain SDZ_RS14915 PF00176 SNF2 family N-terminal domain SDZ_RS14915 PF12419 SNF2 Helicase protein SDZ_RS14925 PF13609 Gram-negative porin SDZ_RS14930 PF13609 Gram-negative porin SDZ_RS14935 PF13609 Gram-negative porin SDZ_RS14960 PF01385 Probable transposase SDZ_RS14960 PF07282 Putative transposase DNA-binding domain SDZ_RS14960 PF12323 Helix-turn-helix domain SDZ_RS14965 PF01797 Transposase IS200 like SDZ_RS14995 PF07559 Flagellar basal body protein FlaE SDZ_RS14995 PF00460 Flagella basal body rod protein SDZ_RS14995 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SDZ_RS15000 PF06508 Queuosine biosynthesis protein QueC SDZ_RS15025 PF02508 Rnf-Nqr subunit, membrane protein SDZ_RS15030 PF04205 FMN-binding domain SDZ_RS15035 PF03116 NQR2, RnfD, RnfE family SDZ_RS15040 PF12838 4Fe-4S dicluster domain SDZ_RS15040 PF13375 RnfC Barrel sandwich hybrid domain SDZ_RS15040 PF10531 SLBB domain SDZ_RS15040 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SDZ_RS15045 PF04060 Putative Fe-S cluster SDZ_RS15050 PF02508 Rnf-Nqr subunit, membrane protein SDZ_RS15055 PF00730 HhH-GPD superfamily base excision DNA repair protein SDZ_RS15055 PF00633 Helix-hairpin-helix motif SDZ_RS15055 PF10576 Iron-sulfur binding domain of endonuclease III SDZ_RS15065 PF00884 Sulfatase SDZ_RS15090 PF01026 TatD related DNase SDZ_RS15120 PF00664 ABC transporter transmembrane region SDZ_RS15120 PF00005 ABC transporter SDZ_RS15125 PF00483 Nucleotidyl transferase SDZ_RS15130 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SDZ_RS15135 PF16363 GDP-mannose 4,6 dehydratase SDZ_RS15205 PF01695 IstB-like ATP binding protein SDZ_RS15260 PF01501 Glycosyl transferase family 8 SDZ_RS15265 PF00535 Glycosyl transferase family 2 SDZ_RS15335 PF01695 IstB-like ATP binding protein