locus-tag	class	description
JNX03_RS00045	COG5002	protein histidine kinase activity
JNX03_RS00050	COG2205	protein histidine kinase activity
JNX03_RS00050	COG2202	Pas domain
JNX03_RS00055	COG0745	RESPONSE REGULATOR receiver
JNX03_RS00065	COG0745	RESPONSE REGULATOR receiver
JNX03_RS00070	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JNX03_RS00090	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
JNX03_RS00110	COG1643	Atp-dependent helicase
JNX03_RS00115	COG1703	isobutyryl-CoA mutase activity
JNX03_RS00130	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
JNX03_RS00170	COG0632	four-way junction helicase activity
JNX03_RS00175	COG2255	four-way junction helicase activity
JNX03_RS00185	COG0824	Thioesterase
JNX03_RS00205	COG0823	Involved in the tonB-independent uptake of proteins
JNX03_RS00210	COG2885	chlorophyll binding
JNX03_RS00220	COG0037	tRNA processing
JNX03_RS00225	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JNX03_RS00235	COG2759	Belongs to the formate--tetrahydrofolate ligase family
JNX03_RS00240	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
JNX03_RS00245	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
JNX03_RS00270	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JNX03_RS00280	COG1201	RNA secondary structure unwinding
JNX03_RS00335	COG4964	Belongs to the GSP D family
JNX03_RS00355	COG0741	lytic transglycosylase activity
JNX03_RS00375	COG1754	DNA topoisomerase type I activity
JNX03_RS00375	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JNX03_RS00380	COG0758	DNA mediated transformation
JNX03_RS00385	COG0312	modulator of DNA gyrase
JNX03_RS00395	COG0109	protoheme IX farnesyltransferase activity
JNX03_RS00405	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
JNX03_RS00415	COG3346	SURF1 family
JNX03_RS00425	COG0612	Peptidase, M16
JNX03_RS00440	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JNX03_RS00445	COG1280	lysine exporter protein (LysE YggA)
JNX03_RS00450	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
JNX03_RS00455	COG0659	secondary active sulfate transmembrane transporter activity
JNX03_RS00460	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JNX03_RS00475	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
JNX03_RS00480	COG4149	molybdate abc transporter
JNX03_RS00485	COG0725	ABC transporter, periplasmic molybdate-binding protein
JNX03_RS00510	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JNX03_RS00525	COG1228	amidohydrolase
JNX03_RS00530	COG2986	histidine ammonia-lyase
JNX03_RS00540	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
JNX03_RS00565	COG3311	Transcriptional regulator
JNX03_RS00605	COG1401	restriction endodeoxyribonuclease activity
JNX03_RS00605	COG1401	restriction endodeoxyribonuclease activity
JNX03_RS00615	COG0420	3'-5' exonuclease activity
JNX03_RS00740	COG1196	nuclear chromosome segregation
JNX03_RS00740	COG0741	lytic transglycosylase activity
JNX03_RS00740	COG0739	heme binding
JNX03_RS00750	COG3451	type IV secretory pathway VirB4
JNX03_RS00765	COG0741	lytic transglycosylase activity
JNX03_RS00795	COG0210	DNA helicase
JNX03_RS00825	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
JNX03_RS00840	COG1492	cobalamin metabolic process
JNX03_RS00855	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JNX03_RS00860	COG0354	folic acid binding
JNX03_RS00870	COG1132	(ABC) transporter
JNX03_RS00875	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
JNX03_RS00885	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JNX03_RS00900	COG0525	valine-tRNA ligase activity
JNX03_RS00925	COG0583	DNA-binding transcription factor activity
JNX03_RS00930	COG2130	NADP-dependent
JNX03_RS00935	COG0483	inositol monophosphate 1-phosphatase activity
JNX03_RS00955	COG1522	sequence-specific DNA binding
JNX03_RS00970	COG0431	NADPH-dependent FMN reductase
JNX03_RS00975	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
JNX03_RS00985	COG3842	ATPase activity
JNX03_RS00990	COG0395	ABC-type sugar transport system, permease component
JNX03_RS00995	COG1175	transmembrane transport
JNX03_RS01020	COG1473	amidohydrolase
JNX03_RS01070	COG4263	nitrous-oxide reductase activity
JNX03_RS01100	COG1902	pentaerythritol trinitrate reductase activity
JNX03_RS01100	COG0446	pyridine nucleotide-disulphide oxidoreductase
JNX03_RS01105	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
JNX03_RS01115	COG0840	transmembrane signaling receptor activity
JNX03_RS01120	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JNX03_RS01130	COG0667	Aldo Keto reductase
JNX03_RS01140	COG3246	L-lysine catabolic process to acetate
JNX03_RS01150	COG0824	Thioesterase
JNX03_RS01150	COG1250	3-hydroxyacyl-CoA dehydrogenase
JNX03_RS01155	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS01195	COG1595	DNA-templated transcription, initiation
JNX03_RS01230	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JNX03_RS01235	COG2169	Transcriptional regulator
JNX03_RS01235	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JNX03_RS01245	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JNX03_RS01255	COG0404	The glycine cleavage system catalyzes the degradation of glycine
JNX03_RS01255	COG0446	pyridine nucleotide-disulphide oxidoreductase
JNX03_RS01270	COG0358	DNA primase activity
JNX03_RS01275	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JNX03_RS01295	COG0432	Pfam Uncharacterised protein family UPF0047
JNX03_RS01300	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JNX03_RS01305	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JNX03_RS01305	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JNX03_RS01335	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JNX03_RS01335	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JNX03_RS01340	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
JNX03_RS01345	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JNX03_RS01395	COG0564	pseudouridine synthase activity
JNX03_RS01405	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JNX03_RS01410	COG2832	Protein of unknown function (DUF454)
JNX03_RS01420	COG1793	dna ligase
JNX03_RS01420	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
JNX03_RS01450	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
JNX03_RS01455	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
JNX03_RS01465	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
JNX03_RS01470	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
JNX03_RS01535	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JNX03_RS01545	COG1832	CoA-binding protein
JNX03_RS01550	COG0140	phosphoribosyl-ATP diphosphatase activity
JNX03_RS01555	COG0107	imidazoleglycerol-phosphate synthase activity
JNX03_RS01560	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
JNX03_RS01575	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
JNX03_RS01580	COG0131	Imidazoleglycerol-phosphate dehydratase
JNX03_RS01610	COG3788	relative of glutathione S-transferase, MAPEG superfamily
JNX03_RS01620	COG0512	Glutamine amidotransferase of anthranilate synthase
JNX03_RS01620	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JNX03_RS01630	COG0321	lipoyl(octanoyl) transferase activity
JNX03_RS01655	COG1609	Transcriptional regulator
JNX03_RS01660	COG1879	ABC-type sugar transport system periplasmic component
JNX03_RS01670	COG1172	Belongs to the binding-protein-dependent transport system permease family
JNX03_RS01675	COG1172	Belongs to the binding-protein-dependent transport system permease family
JNX03_RS01680	COG4948	Mandelate Racemase Muconate Lactonizing
JNX03_RS01685	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS01690	COG2017	converts alpha-aldose to the beta-anomer
JNX03_RS01700	COG0444	Belongs to the ABC transporter superfamily
JNX03_RS01705	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNX03_RS01710	COG0601	transmembrane transport
JNX03_RS01715	COG0747	negative chemotaxis
JNX03_RS01730	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JNX03_RS01735	COG0129	dihydroxy-acid dehydratase activity
JNX03_RS01740	COG0800	Aldolase
JNX03_RS01760	COG4251	negative regulation of phosphorylation
JNX03_RS01770	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JNX03_RS01790	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JNX03_RS01795	COG0730	response to heat
JNX03_RS01815	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JNX03_RS01820	COG4235	cytochrome complex assembly
JNX03_RS01825	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JNX03_RS01850	COG0404	The glycine cleavage system catalyzes the degradation of glycine
JNX03_RS01850	COG0446	pyridine nucleotide-disulphide oxidoreductase
JNX03_RS01895	COG0698	ribose 5-phosphate isomerase
JNX03_RS01900	COG5265	(ABC) transporter
JNX03_RS01905	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JNX03_RS01925	COG1160	GTP binding
JNX03_RS01935	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JNX03_RS01940	COG1862	Preprotein translocase
JNX03_RS01945	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JNX03_RS01950	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JNX03_RS01960	COG3737	Protein of unknown function (DUF498/DUF598)
JNX03_RS01965	COG4133	protoheme IX ABC transporter activity
JNX03_RS01970	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JNX03_RS01975	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JNX03_RS01985	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNX03_RS02005	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JNX03_RS02020	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JNX03_RS02045	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JNX03_RS02050	COG0006	proline dipeptidase activity
JNX03_RS02090	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
JNX03_RS02110	COG1309	transcriptional regulator
JNX03_RS02130	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JNX03_RS02140	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
JNX03_RS02140	COG0321	lipoyl(octanoyl) transferase activity
JNX03_RS02145	COG0084	hydrolase, TatD family'
JNX03_RS02165	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JNX03_RS02170	COG1686	Belongs to the peptidase S11 family
JNX03_RS02220	COG0583	DNA-binding transcription factor activity
JNX03_RS02260	COG1072	(Pantothenic acid kinase))
JNX03_RS02290	COG1175	transmembrane transport
JNX03_RS02315	COG0251	oxidation-reduction process
JNX03_RS02335	COG0583	DNA-binding transcription factor activity
JNX03_RS02345	COG4608	Belongs to the ABC transporter superfamily
JNX03_RS02350	COG0601	transmembrane transport
JNX03_RS02355	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNX03_RS02360	COG0444	Belongs to the ABC transporter superfamily
JNX03_RS02370	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JNX03_RS02380	COG1183	phosphatidylcholine synthase activity
JNX03_RS02390	COG0642	Histidine kinase
JNX03_RS02415	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JNX03_RS02420	COG1522	sequence-specific DNA binding
JNX03_RS02425	COG0006	proline dipeptidase activity
JNX03_RS02430	COG3608	succinylglutamate desuccinylase aspartoacylase
JNX03_RS02440	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JNX03_RS02460	COG0348	domain, Protein
JNX03_RS02470	COG2010	Cytochrome c
JNX03_RS02495	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JNX03_RS02500	COG0668	transmembrane transport
JNX03_RS02520	COG3448	diguanylate cyclase activity
JNX03_RS02520	COG4175	Glycine betaine
JNX03_RS02530	COG1733	regulation of RNA biosynthetic process
JNX03_RS02535	COG2020	methyltransferase activity
JNX03_RS02580	COG1510	regulation of RNA biosynthetic process
JNX03_RS02590	COG1960	acyl-CoA dehydrogenase activity
JNX03_RS02600	COG3483	tryptophan 2,3-dioxygenase activity
JNX03_RS02610	COG3485	protocatechuate 3,4-dioxygenase
JNX03_RS02615	COG3485	protocatechuate 3,4-dioxygenase
JNX03_RS02625	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JNX03_RS02630	COG1121	(ABC) transporter
JNX03_RS02640	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
JNX03_RS02655	COG0740	serine-type endopeptidase activity
JNX03_RS02660	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
JNX03_RS02685	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
JNX03_RS02690	COG0439	Biotin carboxylase
JNX03_RS02705	COG0410	ABC transporter
JNX03_RS02730	COG1396	sequence-specific DNA binding
JNX03_RS02730	COG3800	Transcriptional regulator
JNX03_RS02735	COG0745	RESPONSE REGULATOR receiver
JNX03_RS02745	COG5002	protein histidine kinase activity
JNX03_RS02765	COG3750	Belongs to the UPF0335 family
JNX03_RS02770	COG0544	peptidyl-prolyl cis-trans isomerase activity
JNX03_RS02790	COG0359	binds to the 23S rRNA
JNX03_RS02795	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
JNX03_RS02800	COG0360	Binds together with S18 to 16S ribosomal RNA
JNX03_RS02805	COG0534	Mate efflux family protein
JNX03_RS02815	COG2353	YceI-like domain
JNX03_RS02820	COG3038	cytochrome b561
JNX03_RS02825	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JNX03_RS02840	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JNX03_RS02850	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JNX03_RS02855	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JNX03_RS02865	COG4695	Portal protein
JNX03_RS02950	COG0508	dehydrogenase complex catalyzes the overall conversion of
JNX03_RS02955	COG0022	dehydrogenase e1 component
JNX03_RS02955	COG0508	dehydrogenase complex catalyzes the overall conversion of
JNX03_RS02960	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JNX03_RS02965	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
JNX03_RS02970	COG0126	phosphoglycerate kinase activity
JNX03_RS03010	COG0739	heme binding
JNX03_RS03015	COG2833	Protein of unknown function (DUF455)
JNX03_RS03020	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
JNX03_RS03030	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
JNX03_RS03035	COG2814	Major facilitator Superfamily
JNX03_RS03045	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JNX03_RS03070	COG1024	Enoyl-CoA hydratase
JNX03_RS03075	COG1960	acyl-CoA dehydrogenase activity
JNX03_RS03095	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JNX03_RS03115	COG2354	Protein conserved in bacteria
JNX03_RS03120	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JNX03_RS03140	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
JNX03_RS03155	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
JNX03_RS03185	COG2124	cytochrome p450
JNX03_RS03200	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
JNX03_RS03220	COG0175	sulfate reduction
JNX03_RS03225	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JNX03_RS03235	COG1648	precorrin-2 dehydrogenase activity
JNX03_RS03235	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JNX03_RS03240	COG1522	sequence-specific DNA binding
JNX03_RS03265	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JNX03_RS03270	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
JNX03_RS03275	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
JNX03_RS03285	COG0149	triose-phosphate isomerase activity
JNX03_RS03295	COG1418	mRNA catabolic process
JNX03_RS03305	COG0316	Belongs to the HesB IscA family
JNX03_RS03310	COG2151	metal-sulfur cluster biosynthetic enzyme
JNX03_RS03320	COG4067	protein conserved in archaea
JNX03_RS03320	COG0189	ligase activity
JNX03_RS03335	COG0343	queuine tRNA-ribosyltransferase activity
JNX03_RS03340	COG1335	isochorismatase
JNX03_RS03345	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
JNX03_RS03355	COG0776	regulation of translation
JNX03_RS03365	COG0406	alpha-ribazole phosphatase activity
JNX03_RS03370	COG0406	alpha-ribazole phosphatase activity
JNX03_RS03405	COG2814	Major facilitator Superfamily
JNX03_RS03410	COG0156	8-amino-7-oxononanoate synthase activity
JNX03_RS03420	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
JNX03_RS03430	COG0436	Aminotransferase
JNX03_RS03435	COG1388	LysM domain
JNX03_RS03435	COG0860	N-Acetylmuramoyl-L-alanine amidase
JNX03_RS03440	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
JNX03_RS03445	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
JNX03_RS03480	COG0028	Belongs to the TPP enzyme family
JNX03_RS03500	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
JNX03_RS03510	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
JNX03_RS03515	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
JNX03_RS03555	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
JNX03_RS03570	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
JNX03_RS03605	COG0542	response to heat
JNX03_RS03615	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JNX03_RS03630	COG0010	Belongs to the arginase family
JNX03_RS03640	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
JNX03_RS03645	COG1238	metal cluster binding
JNX03_RS03660	COG1238	metal cluster binding
JNX03_RS03675	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS03700	COG4536	flavin adenine dinucleotide binding
JNX03_RS03710	COG4974	Belongs to the 'phage' integrase family
JNX03_RS03725	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JNX03_RS03730	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
JNX03_RS03740	COG0629	single-stranded DNA binding
JNX03_RS03745	COG0741	lytic transglycosylase activity
JNX03_RS03760	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNX03_RS03765	COG0601	transmembrane transport
JNX03_RS03775	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
JNX03_RS03780	COG0528	UMP kinase activity
JNX03_RS03785	COG0233	cytoplasmic translational termination
JNX03_RS03790	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
JNX03_RS03800	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
JNX03_RS03805	COG0750	zinc metalloprotease
JNX03_RS03820	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JNX03_RS03830	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JNX03_RS03835	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JNX03_RS03840	COG3494	Protein of unknown function (DUF1009)
JNX03_RS03845	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JNX03_RS03850	COG0482	sulfurtransferase activity
JNX03_RS03860	COG0745	RESPONSE REGULATOR receiver
JNX03_RS03865	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JNX03_RS03870	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JNX03_RS03875	COG0840	transmembrane signaling receptor activity
JNX03_RS03885	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
JNX03_RS03890	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JNX03_RS03895	COG2226	methyltransferase
JNX03_RS03900	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
JNX03_RS03905	COG1024	Enoyl-CoA hydratase
JNX03_RS03920	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JNX03_RS03925	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
JNX03_RS03935	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JNX03_RS03940	COG1309	transcriptional regulator
JNX03_RS03945	COG2326	polyphosphate kinase activity
JNX03_RS03950	COG0596	Alpha beta hydrolase
JNX03_RS03955	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
JNX03_RS03965	COG0697	spore germination
JNX03_RS03975	COG0519	Catalyzes the synthesis of GMP from XMP
JNX03_RS03975	COG0518	GMP synthase (glutamine-hydrolyzing) activity
JNX03_RS03980	COG5598	trimethylamine methyltransferase
JNX03_RS04000	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
JNX03_RS04005	COG2010	Cytochrome c
JNX03_RS04020	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
JNX03_RS04025	COG2867	negative regulation of translational initiation
JNX03_RS04035	COG0004	ammonium transporteR
JNX03_RS04040	COG1058	Belongs to the CinA family
JNX03_RS04040	COG1546	Belongs to the CinA family
JNX03_RS04045	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
JNX03_RS04050	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
JNX03_RS04050	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
JNX03_RS04055	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JNX03_RS04060	COG3852	Histidine kinase
JNX03_RS04065	COG2204	response regulator
JNX03_RS04070	COG5000	phosphorelay sensor kinase activity
JNX03_RS04075	COG2204	response regulator
JNX03_RS04085	COG0569	domain protein
JNX03_RS04095	COG1923	regulation of RNA biosynthetic process
JNX03_RS04100	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JNX03_RS04115	COG2084	Dehydrogenase
JNX03_RS04120	COG0840	transmembrane signaling receptor activity
JNX03_RS04140	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JNX03_RS04180	COG4166	transmembrane transport
JNX03_RS04185	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS04200	COG2313	pseudouridylate synthase activity
JNX03_RS04220	COG0352	thiamine-phosphate diphosphorylase activity
JNX03_RS04230	COG1612	heme a metabolic process
JNX03_RS04235	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
JNX03_RS04240	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
JNX03_RS04245	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JNX03_RS04250	COG5425	PFAM Usg family protein
JNX03_RS04265	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JNX03_RS04275	COG0166	Belongs to the GPI family
JNX03_RS04290	COG0318	PFAM AMP-dependent synthetase and ligase
JNX03_RS04300	COG0789	Transcriptional regulator
JNX03_RS04350	COG0010	Belongs to the arginase family
JNX03_RS04355	COG0517	IMP dehydrogenase activity
JNX03_RS04355	COG0516	GMP reductase activity
JNX03_RS04375	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
JNX03_RS04380	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JNX03_RS04390	COG1217	gtp-binding protein TYPA
JNX03_RS04400	COG1522	sequence-specific DNA binding
JNX03_RS04410	COG0121	glutamine amidotransferase
JNX03_RS04415	COG0538	isocitrate dehydrogenase activity
JNX03_RS04430	COG2945	thiolester hydrolase activity
JNX03_RS04435	COG1959	2 iron, 2 sulfur cluster binding
JNX03_RS04445	COG0719	Fe-S assembly protein
JNX03_RS04455	COG0393	Putative heavy-metal-binding
JNX03_RS04460	COG0396	ATPase activity
JNX03_RS04465	COG0719	Fe-S assembly protein
JNX03_RS04480	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JNX03_RS04495	COG0154	amidase activity
JNX03_RS04510	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
JNX03_RS04515	COG3639	organic phosphonate transmembrane transporter activity
JNX03_RS04545	COG0261	This protein binds to 23S rRNA in the presence of protein L20
JNX03_RS04545	COG3743	rRNA binding
JNX03_RS04550	COG0211	Belongs to the bacterial ribosomal protein bL27 family
JNX03_RS04565	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
JNX03_RS04570	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JNX03_RS04575	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
JNX03_RS04605	COG0052	Belongs to the universal ribosomal protein uS2 family
JNX03_RS04610	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JNX03_RS04615	COG2197	response regulator
JNX03_RS04620	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
JNX03_RS04635	COG0745	RESPONSE REGULATOR receiver
JNX03_RS04645	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JNX03_RS04655	COG0573	inorganic phosphate transmembrane transporter activity
JNX03_RS04665	COG5002	protein histidine kinase activity
JNX03_RS04675	COG0194	GDP metabolic process
JNX03_RS04680	COG1561	YicC-like family, N-terminal region
JNX03_RS04700	COG1522	sequence-specific DNA binding
JNX03_RS04705	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
JNX03_RS04720	COG2133	pyrroloquinoline quinone binding
JNX03_RS04765	COG0433	COG0433 Predicted ATPase
JNX03_RS04775	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
JNX03_RS04795	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JNX03_RS04820	COG2072	flavoprotein involved in K transport
JNX03_RS04825	COG0385	Bile acid
JNX03_RS04830	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JNX03_RS04835	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS04845	COG1396	sequence-specific DNA binding
JNX03_RS04850	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JNX03_RS04865	COG1181	Belongs to the D-alanine--D-alanine ligase family
JNX03_RS04875	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JNX03_RS04900	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
JNX03_RS04905	COG0248	Ppx GppA phosphatase
JNX03_RS04920	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
JNX03_RS04940	COG2198	Histidine kinase
JNX03_RS04940	COG0643	Histidine kinase
JNX03_RS04940	COG0784	Response regulator, receiver
JNX03_RS04950	COG0835	chemotaxis
JNX03_RS04955	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
JNX03_RS04960	COG0745	RESPONSE REGULATOR receiver
JNX03_RS04975	COG2201	protein-glutamate methylesterase activity
JNX03_RS04995	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JNX03_RS05000	COG3264	Mechanosensitive ion channel
JNX03_RS05000	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
JNX03_RS05010	COG0494	nUDIX hydrolase
JNX03_RS05020	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JNX03_RS05025	COG0415	Belongs to the DNA photolyase family
JNX03_RS05030	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JNX03_RS05035	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JNX03_RS05040	COG0537	adenosine 5'-monophosphoramidase activity
JNX03_RS05050	COG0604	alcohol dehydrogenase
JNX03_RS05055	COG0404	The glycine cleavage system catalyzes the degradation of glycine
JNX03_RS05070	COG0840	transmembrane signaling receptor activity
JNX03_RS05080	COG1473	amidohydrolase
JNX03_RS05100	COG0114	fumarate hydratase activity
JNX03_RS05115	COG3588	fructose-bisphosphate aldolase
JNX03_RS05120	COG2124	cytochrome p450
JNX03_RS05130	COG0785	Cytochrome C biogenesis protein
JNX03_RS05135	COG0425	Belongs to the sulfur carrier protein TusA family
JNX03_RS05135	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JNX03_RS05140	COG1530	ribonuclease E activity
JNX03_RS05160	COG0047	phosphoribosylformylglycinamidine synthase activity
JNX03_RS05170	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JNX03_RS05175	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
JNX03_RS05195	COG5012	cobalamin binding
JNX03_RS05215	COG2166	iron-sulfur cluster assembly
JNX03_RS05225	COG0251	oxidation-reduction process
JNX03_RS05230	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
JNX03_RS05235	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JNX03_RS05240	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
JNX03_RS05250	COG0840	transmembrane signaling receptor activity
JNX03_RS05310	COG0105	UTP biosynthetic process
JNX03_RS05315	COG0488	(ABC) transporter
JNX03_RS05320	COG2095	MarC family integral membrane protein
JNX03_RS05325	COG3577	Aspartyl protease
JNX03_RS05335	COG0456	acetyltransferase
JNX03_RS05345	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
JNX03_RS05360	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
JNX03_RS05370	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
JNX03_RS05375	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
JNX03_RS05385	COG2890	protein-(glutamine-N5) methyltransferase activity
JNX03_RS05390	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JNX03_RS05410	COG0010	Belongs to the arginase family
JNX03_RS05415	COG1473	amidohydrolase
JNX03_RS05420	COG3956	TIGRFAM MazG family protein
JNX03_RS05435	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
JNX03_RS05450	COG0513	Belongs to the DEAD box helicase family
JNX03_RS05470	COG0148	phosphopyruvate hydratase activity
JNX03_RS05485	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
JNX03_RS05490	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JNX03_RS05505	COG0488	(ABC) transporter
JNX03_RS05525	COG0333	Belongs to the bacterial ribosomal protein bL32 family
JNX03_RS05530	COG0416	fatty acid biosynthetic process
JNX03_RS05535	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JNX03_RS05540	COG0776	regulation of translation
JNX03_RS05555	COG0717	Belongs to the dCTP deaminase family
JNX03_RS05565	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JNX03_RS05570	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JNX03_RS05575	COG1472	Belongs to the glycosyl hydrolase 3 family
JNX03_RS05585	COG0018	arginyl-trna synthetase
JNX03_RS05590	COG0232	Belongs to the dGTPase family. Type 2 subfamily
JNX03_RS05595	COG0316	Belongs to the HesB IscA family
JNX03_RS05635	COG2814	Major facilitator Superfamily
JNX03_RS05655	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JNX03_RS05660	COG0215	cysteine-tRNA ligase activity
JNX03_RS05680	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JNX03_RS05705	COG1278	Cold shock
JNX03_RS05710	COG0259	pyridoxamine-phosphate oxidase activity
JNX03_RS05715	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
JNX03_RS05725	COG1280	lysine exporter protein (LysE YggA)
JNX03_RS05730	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
JNX03_RS05745	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JNX03_RS05750	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
JNX03_RS05775	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JNX03_RS05780	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
JNX03_RS05785	COG0134	indole-3-glycerol-phosphate synthase activity
JNX03_RS05790	COG0315	cyclic pyranopterin monophosphate synthase activity
JNX03_RS05795	COG0303	'Molybdopterin
JNX03_RS05800	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JNX03_RS05805	COG0658	competence protein
JNX03_RS05805	COG2333	competence protein COMEC
JNX03_RS05810	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JNX03_RS05815	COG0372	Belongs to the citrate synthase family
JNX03_RS05830	COG1024	Enoyl-CoA hydratase
JNX03_RS05835	COG3088	subunit of a heme lyase
JNX03_RS05840	COG1138	Cytochrome C-type biogenesis protein
JNX03_RS05855	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
JNX03_RS05860	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
JNX03_RS05865	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
JNX03_RS05890	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JNX03_RS05935	COG0418	dihydroorotase activity
JNX03_RS05940	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JNX03_RS05945	COG0305	Participates in initiation and elongation during chromosome replication
JNX03_RS05960	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JNX03_RS05980	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JNX03_RS05985	COG3811	Belongs to the UPF0386 family
JNX03_RS06005	COG0300	oxidoreductase activity
JNX03_RS06010	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
JNX03_RS06015	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
JNX03_RS06030	COG0805	protein transport
JNX03_RS06035	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JNX03_RS06040	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JNX03_RS06065	COG3842	ATPase activity
JNX03_RS06075	COG4335	DNA alkylation repair
JNX03_RS06080	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS06095	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
JNX03_RS06105	COG0513	Belongs to the DEAD box helicase family
JNX03_RS06115	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
JNX03_RS06125	COG1007	ATP synthesis coupled electron transport
JNX03_RS06140	COG0713	ATP synthesis coupled electron transport
JNX03_RS06155	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JNX03_RS06160	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
JNX03_RS06205	COG3743	rRNA binding
JNX03_RS06205	COG0261	This protein binds to 23S rRNA in the presence of protein L20
JNX03_RS06215	COG0649	NAD binding
JNX03_RS06225	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JNX03_RS06230	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JNX03_RS06245	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
JNX03_RS06265	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JNX03_RS06270	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JNX03_RS06285	COG1960	acyl-CoA dehydrogenase activity
JNX03_RS06300	COG0546	phosphoglycolate phosphatase activity
JNX03_RS06305	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JNX03_RS06330	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
JNX03_RS06335	COG1519	Transferase
JNX03_RS06340	COG0438	transferase activity, transferring glycosyl groups
JNX03_RS06345	COG1473	amidohydrolase
JNX03_RS06350	COG1473	amidohydrolase
JNX03_RS06355	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JNX03_RS06360	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JNX03_RS06370	COG4172	Belongs to the ABC transporter superfamily
JNX03_RS06380	COG0601	transmembrane transport
JNX03_RS06385	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNX03_RS06400	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
JNX03_RS06415	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
JNX03_RS06435	COG0308	aminopeptidase N
JNX03_RS06440	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS06460	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JNX03_RS06480	COG1959	2 iron, 2 sulfur cluster binding
JNX03_RS06495	COG0484	heat shock protein binding
JNX03_RS06530	COG0038	chloride channel
JNX03_RS06540	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JNX03_RS06550	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JNX03_RS06555	COG0849	cell division
JNX03_RS06560	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
JNX03_RS06565	COG1181	Belongs to the D-alanine--D-alanine ligase family
JNX03_RS06570	COG0812	UDP-N-acetylmuramate dehydrogenase activity
JNX03_RS06590	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
JNX03_RS06595	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JNX03_RS06610	COG2081	HI0933 family
JNX03_RS06615	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JNX03_RS06620	COG2066	Belongs to the glutaminase family
JNX03_RS06625	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JNX03_RS06635	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JNX03_RS06650	COG0275	rRNA processing
JNX03_RS06655	COG2001	Belongs to the MraZ family
JNX03_RS06665	COG0489	protein tyrosine kinase activity
JNX03_RS06690	COG0210	DNA helicase
JNX03_RS06700	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
JNX03_RS06710	COG0346	lactoylglutathione lyase activity
JNX03_RS06735	COG0505	Belongs to the CarA family
JNX03_RS06745	COG1802	Transcriptional regulator
JNX03_RS06775	COG1522	sequence-specific DNA binding
JNX03_RS06785	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
JNX03_RS06805	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JNX03_RS06810	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JNX03_RS06815	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JNX03_RS06825	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JNX03_RS06825	COG0574	Belongs to the PEP-utilizing enzyme family
JNX03_RS06830	COG0751	glycine-tRNA ligase activity
JNX03_RS06845	COG0752	glycyl-tRNA synthetase alpha subunit
JNX03_RS06860	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JNX03_RS06875	COG1469	GTP cyclohydrolase I activity
JNX03_RS06885	COG0625	glutathione transferase activity
JNX03_RS06900	COG0552	protein localization to endoplasmic reticulum
JNX03_RS06910	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
JNX03_RS06925	COG1570	exodeoxyribonuclease VII activity
JNX03_RS06930	COG0151	Belongs to the GarS family
JNX03_RS06965	COG0583	DNA-binding transcription factor activity
JNX03_RS06970	COG0330	HflC and HflK could
JNX03_RS06975	COG0330	HflC and HflK could
JNX03_RS06985	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
JNX03_RS06995	COG1760	l-serine dehydratase
JNX03_RS07020	COG0346	lactoylglutathione lyase activity
JNX03_RS07025	COG1741	Belongs to the pirin family
JNX03_RS07050	COG2267	carboxylic ester hydrolase activity
JNX03_RS07075	COG1609	Transcriptional regulator
JNX03_RS07080	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS07090	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JNX03_RS07100	COG0395	ABC-type sugar transport system, permease component
JNX03_RS07115	COG3842	ATPase activity
JNX03_RS07135	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JNX03_RS07150	COG3206	protein involved in exopolysaccharide biosynthesis
JNX03_RS07150	COG0489	protein tyrosine kinase activity
JNX03_RS07170	COG1215	transferase activity, transferring glycosyl groups
JNX03_RS07185	COG2977	Belongs to the P-Pant transferase superfamily
JNX03_RS07190	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JNX03_RS07190	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JNX03_RS07220	COG0463	Glycosyl transferase, family 2
JNX03_RS07240	COG1012	belongs to the aldehyde dehydrogenase family
JNX03_RS07255	COG3447	MASE1 domain protein
JNX03_RS07255	COG5001	Diguanylate cyclase
JNX03_RS07255	COG5002	protein histidine kinase activity
JNX03_RS07315	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
JNX03_RS07350	COG0504	CTP synthase activity
JNX03_RS07365	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
JNX03_RS07395	COG4215	(ABC) transporter
JNX03_RS07400	COG4160	amino acid transport
JNX03_RS07405	COG0174	glutamine synthetase
JNX03_RS07410	COG0519	Catalyzes the synthesis of GMP from XMP
JNX03_RS07415	COG0174	glutamine synthetase
JNX03_RS07420	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JNX03_RS07425	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JNX03_RS07440	COG3243	poly(R)-hydroxyalkanoic acid synthase
JNX03_RS07490	COG2814	Major facilitator Superfamily
JNX03_RS07495	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JNX03_RS07505	COG3220	belongs to the UPF0276 family
JNX03_RS07520	COG1393	Belongs to the ArsC family
JNX03_RS07525	COG1278	Cold shock
JNX03_RS07540	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
JNX03_RS07570	COG1846	Transcriptional regulator
JNX03_RS07600	COG2378	regulation of single-species biofilm formation
JNX03_RS07605	COG0534	Mate efflux family protein
JNX03_RS07620	COG0596	Alpha beta hydrolase
JNX03_RS07640	COG0187	DNA topoisomerase II activity
JNX03_RS07670	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
JNX03_RS07675	COG1136	(ABC) transporter
JNX03_RS07690	COG0442	prolyl-tRNA aminoacylation
JNX03_RS07695	COG2195	Cleaves the N-terminal amino acid of tripeptides
JNX03_RS07715	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
JNX03_RS07720	COG0248	Ppx GppA phosphatase
JNX03_RS07735	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
JNX03_RS07750	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
JNX03_RS07750	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
JNX03_RS07770	COG4770	biotin carboxylase activity
JNX03_RS07805	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JNX03_RS07810	COG2814	Major facilitator Superfamily
JNX03_RS07815	COG3800	Transcriptional regulator
JNX03_RS07815	COG1396	sequence-specific DNA binding
JNX03_RS07835	COG3119	arylsulfatase activity
JNX03_RS07840	COG1309	transcriptional regulator
JNX03_RS07870	COG0217	transcriptional regulatory protein
JNX03_RS07875	COG0490	domain, Protein
JNX03_RS07875	COG0471	metal ion transport
JNX03_RS07885	COG0471	metal ion transport
JNX03_RS07885	COG3273	potassium ion transport
JNX03_RS07890	COG1692	metallophosphoesterase
JNX03_RS07895	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JNX03_RS07900	COG2239	Acts as a magnesium transporter
JNX03_RS07905	COG0402	S-adenosylhomocysteine deaminase activity
JNX03_RS07910	COG2340	Cysteine-rich secretory protein family
JNX03_RS07920	COG0483	inositol monophosphate 1-phosphatase activity
JNX03_RS07925	COG1396	sequence-specific DNA binding
JNX03_RS07930	COG0583	DNA-binding transcription factor activity
JNX03_RS07940	COG0670	Belongs to the BI1 family
JNX03_RS07950	COG0267	Belongs to the bacterial ribosomal protein bL33 family
JNX03_RS07955	COG0300	oxidoreductase activity
JNX03_RS07965	COG3023	N-Acetylmuramoyl-L-alanine amidase
JNX03_RS07975	COG0154	amidase activity
JNX03_RS07980	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JNX03_RS07985	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
JNX03_RS08000	COG0590	tRNA wobble adenosine to inosine editing
JNX03_RS08025	COG3853	Toxic anion resistance protein (TelA)
JNX03_RS08055	COG1490	D-aminoacyl-tRNA deacylase activity
JNX03_RS08080	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNX03_RS08085	COG4172	Belongs to the ABC transporter superfamily
JNX03_RS08115	COG0657	acetylesterase activity
JNX03_RS08120	COG0318	PFAM AMP-dependent synthetase and ligase
JNX03_RS08125	COG1652	LysM domain
JNX03_RS08130	COG1132	(ABC) transporter
JNX03_RS08190	COG0583	DNA-binding transcription factor activity
JNX03_RS08215	COG2721	sulfolactate sulfo-lyase activity
JNX03_RS08225	COG2211	Major facilitator Superfamily
JNX03_RS08235	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS08265	COG0395	ABC-type sugar transport system, permease component
JNX03_RS08280	COG3119	arylsulfatase activity
JNX03_RS08285	COG0673	inositol 2-dehydrogenase activity
JNX03_RS08290	COG2186	Transcriptional regulator
JNX03_RS08310	COG1850	ribulose-bisphosphate carboxylase activity
JNX03_RS08335	COG0515	serine threonine protein kinase
JNX03_RS08335	COG2815	serine threonine protein kinase
JNX03_RS08440	COG0811	peptide transport
JNX03_RS08490	COG3239	Fatty acid desaturase
JNX03_RS08500	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JNX03_RS08510	COG2358	TRAP transporter, solute receptor (TAXI family
JNX03_RS08520	COG0589	response to stress
JNX03_RS08525	COG0583	DNA-binding transcription factor activity
JNX03_RS08530	COG4608	Belongs to the ABC transporter superfamily
JNX03_RS08540	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNX03_RS08545	COG0601	transmembrane transport
JNX03_RS08565	COG0457	Tetratricopeptide repeat
JNX03_RS08575	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS08580	COG3386	PFAM SMP-30 Gluconolaconase
JNX03_RS08590	COG1250	3-hydroxyacyl-CoA dehydrogenase
JNX03_RS08600	COG3842	ATPase activity
JNX03_RS08605	COG1175	transmembrane transport
JNX03_RS08610	COG0395	ABC-type sugar transport system, permease component
JNX03_RS08625	COG0673	inositol 2-dehydrogenase activity
JNX03_RS08635	COG1609	Transcriptional regulator
JNX03_RS08645	COG2207	Transcriptional regulator
JNX03_RS08660	COG1802	Transcriptional regulator
JNX03_RS08665	COG1529	Aldehyde oxidase and xanthine dehydrogenase
JNX03_RS08665	COG2010	Cytochrome c
JNX03_RS08670	COG2080	2 iron, 2 sulfur cluster binding
JNX03_RS08700	COG0179	Fumarylacetoacetate (FAA) hydrolase
JNX03_RS08725	COG0464	growth
JNX03_RS08770	COG0582	viral genome integration into host DNA
JNX03_RS08780	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
JNX03_RS08785	COG1530	ribonuclease E activity
JNX03_RS08795	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
JNX03_RS08800	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JNX03_RS08805	COG0583	DNA-binding transcription factor activity
JNX03_RS08810	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JNX03_RS08825	COG0227	Belongs to the bacterial ribosomal protein bL28 family
JNX03_RS08830	COG1183	phosphatidylcholine synthase activity
JNX03_RS08835	COG2814	Major facilitator Superfamily
JNX03_RS08840	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JNX03_RS08845	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JNX03_RS08850	COG3768	UPF0283 membrane protein
JNX03_RS08860	COG3106	COG3106 Predicted ATPase
JNX03_RS08865	COG0101	tRNA pseudouridine synthase activity
JNX03_RS08870	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
JNX03_RS08885	COG0306	phosphate transporter
JNX03_RS08900	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JNX03_RS08920	COG1804	L-carnitine dehydratase bile acid-inducible protein F
JNX03_RS08935	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
JNX03_RS08940	COG2943	transferase activity, transferring hexosyl groups
JNX03_RS08960	COG1573	uracil-dna glycosylase
JNX03_RS08985	COG2877	3-deoxy-8-phosphooctulonate synthase activity
JNX03_RS08990	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JNX03_RS08995	COG0135	phosphoribosylanthranilate isomerase activity
JNX03_RS09005	COG0776	regulation of translation
JNX03_RS09010	COG0539	negative regulation of cytoplasmic translation
JNX03_RS09015	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
JNX03_RS09025	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
JNX03_RS09030	COG0220	tRNA (guanine-N7-)-methyltransferase activity
JNX03_RS09040	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
JNX03_RS09045	COG0815	Transfers the fatty acyl group on membrane lipoproteins
JNX03_RS09050	COG1253	flavin adenine dinucleotide binding
JNX03_RS09055	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JNX03_RS09060	COG1702	phosphate starvation-inducible protein PhoH
JNX03_RS09075	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JNX03_RS09115	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JNX03_RS09120	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
JNX03_RS09140	COG1047	Peptidyl-prolyl cis-trans
JNX03_RS09165	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
JNX03_RS09170	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JNX03_RS09175	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JNX03_RS09190	COG4948	Mandelate Racemase Muconate Lactonizing
JNX03_RS09195	COG0022	dehydrogenase e1 component
JNX03_RS09200	COG1960	acyl-CoA dehydrogenase activity
JNX03_RS09205	COG0583	DNA-binding transcription factor activity
JNX03_RS09215	COG2135	peptidase activity
JNX03_RS09230	COG0737	Belongs to the 5'-nucleotidase family
JNX03_RS09245	COG0167	dihydroorotate dehydrogenase activity
JNX03_RS09250	COG1393	Belongs to the ArsC family
JNX03_RS09255	COG0534	Mate efflux family protein
JNX03_RS09280	COG2197	response regulator
JNX03_RS09285	COG0789	Transcriptional regulator
JNX03_RS09290	COG1960	acyl-CoA dehydrogenase activity
JNX03_RS09300	COG1960	acyl-CoA dehydrogenase activity
JNX03_RS09305	COG0625	glutathione transferase activity
JNX03_RS09310	COG0183	Belongs to the thiolase family
JNX03_RS09320	COG0402	S-adenosylhomocysteine deaminase activity
JNX03_RS09345	COG0318	PFAM AMP-dependent synthetase and ligase
JNX03_RS09365	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
JNX03_RS09370	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
JNX03_RS09375	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
JNX03_RS09385	COG0281	malic enzyme
JNX03_RS09385	COG0280	phosphate acetyltransferase
JNX03_RS09395	COG3237	CsbD-like
JNX03_RS09400	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JNX03_RS09405	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
JNX03_RS09430	COG3739	integral membrane protein
JNX03_RS09440	COG0596	Alpha beta hydrolase
JNX03_RS09445	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
JNX03_RS09465	COG1435	thymidine kinase activity
JNX03_RS09475	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JNX03_RS09480	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JNX03_RS09500	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JNX03_RS09510	COG1496	oxidoreductase activity
JNX03_RS09525	COG1522	sequence-specific DNA binding
JNX03_RS09530	COG0492	ferredoxin-NADP+ reductase activity
JNX03_RS09535	COG2046	Belongs to the sulfate adenylyltransferase family
JNX03_RS09535	COG0529	Catalyzes the synthesis of activated sulfate
JNX03_RS09545	COG0071	Belongs to the small heat shock protein (HSP20) family
JNX03_RS09560	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JNX03_RS09565	COG3454	Phosphonate metabolism
JNX03_RS09600	COG4251	negative regulation of phosphorylation
JNX03_RS09610	COG0459	protein refolding
JNX03_RS09615	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
JNX03_RS09630	COG1227	inorganic diphosphatase activity
JNX03_RS09645	COG2030	dehydratase
JNX03_RS09650	COG0196	riboflavin kinase activity
JNX03_RS09655	COG2983	Belongs to the UPF0260 family
JNX03_RS09685	COG0355	proton-transporting ATP synthase activity, rotational mechanism
JNX03_RS09690	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JNX03_RS09695	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
JNX03_RS09700	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
JNX03_RS09705	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JNX03_RS09720	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JNX03_RS09745	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
JNX03_RS09760	COG0287	Prephenate dehydrogenase
JNX03_RS09765	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JNX03_RS09770	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
JNX03_RS09775	COG2818	Glycosylase
JNX03_RS09790	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS09795	COG0583	DNA-binding transcription factor activity
JNX03_RS09810	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
JNX03_RS09820	COG0142	geranyltranstransferase activity
JNX03_RS09825	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
JNX03_RS09840	COG0789	Transcriptional regulator
JNX03_RS09850	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JNX03_RS09865	COG0303	'Molybdopterin
JNX03_RS09870	COG1763	Mo-molybdopterin cofactor biosynthetic process
JNX03_RS09875	COG0746	molybdenum cofactor guanylyltransferase activity
JNX03_RS09880	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
JNX03_RS09915	COG1960	acyl-CoA dehydrogenase activity
JNX03_RS09920	COG0009	L-threonylcarbamoyladenylate synthase
JNX03_RS09925	COG1678	Uncharacterized ACR, COG1678
JNX03_RS09935	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JNX03_RS09945	COG0521	Mo-molybdopterin cofactor biosynthetic process
JNX03_RS09950	COG1280	lysine exporter protein (LysE YggA)
JNX03_RS09955	COG1573	uracil-dna glycosylase
JNX03_RS09960	COG0540	Belongs to the ATCase OTCase family
JNX03_RS09975	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
JNX03_RS09980	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
JNX03_RS09990	COG1280	lysine exporter protein (LysE YggA)
JNX03_RS10010	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JNX03_RS10015	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
JNX03_RS10030	COG3011	Protein conserved in bacteria
JNX03_RS10035	COG0589	response to stress
JNX03_RS10040	COG0314	molybdopterin synthase activity
JNX03_RS10050	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JNX03_RS10055	COG0322	excinuclease ABC activity
JNX03_RS10060	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS10070	COG0616	signal peptide processing
JNX03_RS10070	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
JNX03_RS10075	COG0842	Transport permease protein
JNX03_RS10080	COG1131	(ABC) transporter
JNX03_RS10095	COG3321	synthase
JNX03_RS10095	COG0604	alcohol dehydrogenase
JNX03_RS10095	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS10100	COG2111	Na H antiporter
JNX03_RS10100	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JNX03_RS10105	COG1006	Multisubunit Na H antiporter MnhC subunit
JNX03_RS10110	COG0651	ATP synthesis coupled electron transport
JNX03_RS10115	COG1863	multisubunit Na H antiporter MnhE subunit
JNX03_RS10120	COG2212	antiporter activity
JNX03_RS10125	COG1320	monovalent cation:proton antiporter activity
JNX03_RS10135	COG1177	transmembrane transport
JNX03_RS10140	COG1176	ABC-type spermidine putrescine transport system, permease component I
JNX03_RS10145	COG3842	ATPase activity
JNX03_RS10160	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
JNX03_RS10160	COG1618	nucleotide phosphatase activity, acting on free nucleotides
JNX03_RS10165	COG0303	'Molybdopterin
JNX03_RS10180	COG2181	nitrate reductase activity
JNX03_RS10185	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
JNX03_RS10190	COG1140	nitrate reductase beta subunit
JNX03_RS10195	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JNX03_RS10200	COG2223	nitrite transmembrane transporter activity
JNX03_RS10205	COG2223	nitrite transmembrane transporter activity
JNX03_RS10220	COG3852	Histidine kinase
JNX03_RS10225	COG2204	response regulator
JNX03_RS10240	COG2864	formate dehydrogenase
JNX03_RS10245	COG0437	4 iron, 4 sulfur cluster binding
JNX03_RS10250	COG3383	formate dehydrogenase (NAD+) activity
JNX03_RS10250	COG0243	molybdopterin cofactor binding
JNX03_RS10290	COG0489	protein tyrosine kinase activity
JNX03_RS10340	COG4638	Rieske (2fe-2S)
JNX03_RS10355	COG2115	Belongs to the xylose isomerase family
JNX03_RS10360	COG1070	Carbohydrate kinase
JNX03_RS10370	COG0583	DNA-binding transcription factor activity
JNX03_RS10375	COG0404	The glycine cleavage system catalyzes the degradation of glycine
JNX03_RS10390	COG2070	2-Nitropropane dioxygenase
JNX03_RS10395	COG1942	4-Oxalocrotonate Tautomerase
JNX03_RS10425	COG3852	Histidine kinase
JNX03_RS10430	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JNX03_RS10440	COG0230	Belongs to the bacterial ribosomal protein bL34 family
JNX03_RS10445	COG0594	ribonuclease P activity
JNX03_RS10450	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
JNX03_RS10460	COG0037	tRNA processing
JNX03_RS10465	COG5001	Diguanylate cyclase
JNX03_RS10470	COG0706	membrane insertase activity
JNX03_RS10480	COG0218	Necessary for normal cell division and for the maintenance of normal septation
JNX03_RS10485	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
JNX03_RS10495	COG2062	phosphohistidine phosphatase, SixA
JNX03_RS10500	COG1126	abc transporter atp-binding protein
JNX03_RS10505	COG0765	amino acid transport
JNX03_RS10510	COG4597	amino acid ABC transporter
JNX03_RS10515	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JNX03_RS10525	COG0546	phosphoglycolate phosphatase activity
JNX03_RS10535	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JNX03_RS10540	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JNX03_RS10545	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JNX03_RS10550	COG0203	ribosomal protein L17
JNX03_RS10555	COG0202	RNA polymerase activity
JNX03_RS10560	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
JNX03_RS10565	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
JNX03_RS10570	COG0563	adenylate kinase activity
JNX03_RS10575	COG0201	protein transport
JNX03_RS10580	COG0200	Binds to the 23S rRNA
JNX03_RS10595	COG1841	ribosomal large subunit assembly
JNX03_RS10600	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
JNX03_RS10605	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
JNX03_RS10610	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
JNX03_RS10615	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JNX03_RS10620	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JNX03_RS10625	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
JNX03_RS10630	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
JNX03_RS10635	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
JNX03_RS10640	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
JNX03_RS10645	COG0255	Belongs to the universal ribosomal protein uL29 family
JNX03_RS10665	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JNX03_RS10670	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
JNX03_RS10675	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
JNX03_RS10680	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
JNX03_RS10685	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
JNX03_RS10695	COG0089	rRNA binding
JNX03_RS10700	COG0088	Forms part of the polypeptide exit tunnel
JNX03_RS10705	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
JNX03_RS10710	COG0051	transcription antitermination factor activity, RNA binding
JNX03_RS10715	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JNX03_RS10725	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JNX03_RS10730	COG0049	tRNA binding
JNX03_RS10735	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
JNX03_RS10745	COG0697	spore germination
JNX03_RS10760	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JNX03_RS10765	COG0085	RNA polymerase activity
JNX03_RS10770	COG0222	ribosome binding
JNX03_RS10775	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
JNX03_RS10785	COG0081	regulation of translation
JNX03_RS10790	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
JNX03_RS10795	COG0250	Participates in transcription elongation, termination and antitermination
JNX03_RS10830	COG0436	Aminotransferase
JNX03_RS10840	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JNX03_RS10850	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JNX03_RS10850	COG2124	cytochrome p450
JNX03_RS10855	COG0501	Belongs to the peptidase M48B family
JNX03_RS10865	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JNX03_RS10875	COG0300	oxidoreductase activity
JNX03_RS10885	COG2096	Adenosyltransferase
JNX03_RS10905	COG1250	3-hydroxyacyl-CoA dehydrogenase
JNX03_RS10915	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JNX03_RS10925	COG1660	Displays ATPase and GTPase activities
JNX03_RS10935	COG2205	protein histidine kinase activity
JNX03_RS10940	COG0745	RESPONSE REGULATOR receiver
JNX03_RS10945	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
JNX03_RS10960	COG1396	sequence-specific DNA binding
JNX03_RS10990	COG1381	Involved in DNA repair and RecF pathway recombination
JNX03_RS11000	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JNX03_RS11005	COG0571	ribonuclease III activity
JNX03_RS11010	COG0681	Belongs to the peptidase S26 family
JNX03_RS11015	COG0736	holo-[acyl-carrier-protein] synthase activity
JNX03_RS11025	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
JNX03_RS11040	COG1758	RNA polymerase activity
JNX03_RS11045	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JNX03_RS11055	COG2197	response regulator
JNX03_RS11060	COG0697	spore germination
JNX03_RS11065	COG1846	Transcriptional regulator
JNX03_RS11070	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
JNX03_RS11075	COG1280	lysine exporter protein (LysE YggA)
JNX03_RS11090	COG0328	RNA-DNA hybrid ribonuclease activity
JNX03_RS11095	COG2860	membrane
JNX03_RS11105	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
JNX03_RS11110	COG0242	peptide deformylase activity
JNX03_RS11115	COG0242	peptide deformylase activity
JNX03_RS11120	COG0242	peptide deformylase activity
JNX03_RS11125	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JNX03_RS11140	COG0435	Glutathione S-transferase
JNX03_RS11155	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
JNX03_RS11195	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JNX03_RS11200	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JNX03_RS11205	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JNX03_RS11210	COG0356	it plays a direct role in the translocation of protons across the membrane
JNX03_RS11220	COG0583	DNA-binding transcription factor activity
JNX03_RS11245	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JNX03_RS11270	COG0228	four-way junction DNA binding
JNX03_RS11275	COG0778	Nitroreductase
JNX03_RS11285	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JNX03_RS11295	COG0336	Belongs to the RNA methyltransferase TrmD family
JNX03_RS11305	COG2326	polyphosphate kinase activity
JNX03_RS11310	COG0335	large ribosomal subunit rRNA binding
JNX03_RS11315	COG0254	rRNA binding
JNX03_RS11320	COG0488	(ABC) transporter
JNX03_RS11325	COG3920	Histidine kinase
JNX03_RS11330	COG2151	metal-sulfur cluster biosynthetic enzyme
JNX03_RS11330	COG0489	protein tyrosine kinase activity
JNX03_RS11345	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
JNX03_RS11350	COG0179	Fumarylacetoacetate (FAA) hydrolase
JNX03_RS11365	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JNX03_RS11385	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JNX03_RS11420	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JNX03_RS11440	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JNX03_RS11465	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
JNX03_RS11475	COG1686	Belongs to the peptidase S11 family
JNX03_RS11480	COG0583	DNA-binding transcription factor activity
JNX03_RS11490	COG1335	isochorismatase
JNX03_RS11505	COG4172	Belongs to the ABC transporter superfamily
JNX03_RS11510	COG4239	(ABC) transporter, permease
JNX03_RS11515	COG4174	ABC transporter (Permease)
JNX03_RS11520	COG4166	transmembrane transport
JNX03_RS11525	COG3474	cytochrome
JNX03_RS11530	COG0077	Prephenate dehydratase
JNX03_RS11545	COG2816	NAD+ diphosphatase activity
JNX03_RS11550	COG0737	Belongs to the 5'-nucleotidase family
JNX03_RS11565	COG1309	transcriptional regulator
JNX03_RS11570	COG2321	neutral zinc metallopeptidase
JNX03_RS11580	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JNX03_RS11585	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
JNX03_RS11590	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JNX03_RS11615	COG0604	alcohol dehydrogenase
JNX03_RS11615	COG3321	synthase
JNX03_RS11615	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS11625	COG0183	Belongs to the thiolase family
JNX03_RS11630	COG1268	BioY protein
JNX03_RS11635	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JNX03_RS11640	COG1122	ATPase activity
JNX03_RS11650	COG0828	Belongs to the bacterial ribosomal protein bS21 family
JNX03_RS11655	COG3920	Histidine kinase
JNX03_RS11660	COG1522	sequence-specific DNA binding
JNX03_RS11665	COG0686	Belongs to the AlaDH PNT family
JNX03_RS11680	COG1970	mechanosensitive ion channel activity
JNX03_RS11685	COG0625	glutathione transferase activity
JNX03_RS11695	COG0072	phenylalanine-tRNA ligase activity
JNX03_RS11695	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JNX03_RS11705	COG0519	Catalyzes the synthesis of GMP from XMP
JNX03_RS11705	COG0518	GMP synthase (glutamine-hydrolyzing) activity
JNX03_RS11710	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JNX03_RS11715	COG1309	transcriptional regulator
JNX03_RS11725	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
JNX03_RS11730	COG0291	Belongs to the bacterial ribosomal protein bL35 family
JNX03_RS11745	COG0469	pyruvate kinase activity
JNX03_RS11780	COG4948	Mandelate Racemase Muconate Lactonizing
JNX03_RS11795	COG1522	sequence-specific DNA binding
JNX03_RS11805	COG0825	malonyl-CoA metabolic process
JNX03_RS11850	COG0640	Transcriptional regulator
JNX03_RS11860	COG2423	ornithine cyclodeaminase activity
JNX03_RS11865	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
JNX03_RS11870	COG0709	Synthesizes selenophosphate from selenide and ATP
JNX03_RS11875	COG0587	DNA-directed DNA polymerase activity
JNX03_RS11900	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JNX03_RS11905	COG1116	anion transmembrane transporter activity
JNX03_RS11915	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JNX03_RS11925	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JNX03_RS11930	COG0028	Belongs to the TPP enzyme family
JNX03_RS11940	COG0243	molybdopterin cofactor binding
JNX03_RS11945	COG0437	4 iron, 4 sulfur cluster binding
JNX03_RS11960	COG1473	amidohydrolase
JNX03_RS11965	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JNX03_RS11970	COG0741	lytic transglycosylase activity
JNX03_RS11980	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
JNX03_RS11980	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JNX03_RS11990	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
JNX03_RS12000	COG0431	NADPH-dependent FMN reductase
JNX03_RS12005	COG2885	chlorophyll binding
JNX03_RS12015	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JNX03_RS12020	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JNX03_RS12035	COG1051	belongs to the nudix hydrolase family
JNX03_RS12045	COG1902	pentaerythritol trinitrate reductase activity
JNX03_RS12045	COG0446	pyridine nucleotide-disulphide oxidoreductase
JNX03_RS12055	COG0583	DNA-binding transcription factor activity
JNX03_RS12075	COG1546	Belongs to the CinA family
JNX03_RS12075	COG1058	Belongs to the CinA family
JNX03_RS12080	COG1489	DNA binding
JNX03_RS12085	COG0024	Methionine aminopeptidase
JNX03_RS12090	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JNX03_RS12095	COG0742	ribosomal rna small subunit methyltransferase
JNX03_RS12105	COG0678	peroxiredoxin activity
JNX03_RS12110	COG0668	transmembrane transport
JNX03_RS12115	COG2154	pterin-4-alpha-carbinolamine dehydratase
JNX03_RS12160	COG0004	ammonium transporteR
JNX03_RS12170	COG2897	thiosulfate sulfurtransferase activity
JNX03_RS12180	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
JNX03_RS12285	COG0247	lactate metabolic process
JNX03_RS12290	COG0277	FAD linked oxidase domain protein
JNX03_RS12295	COG0277	FAD linked oxidase domain protein
JNX03_RS12310	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
JNX03_RS12315	COG0799	negative regulation of ribosome biogenesis
JNX03_RS12320	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
JNX03_RS12320	COG3264	Mechanosensitive ion channel
JNX03_RS12325	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
JNX03_RS12330	COG0066	3-isopropylmalate dehydratase activity
JNX03_RS12345	COG0473	3-isopropylmalate dehydrogenase activity
JNX03_RS12360	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JNX03_RS12380	COG0395	ABC-type sugar transport system, permease component
JNX03_RS12385	COG1175	transmembrane transport
JNX03_RS12390	COG3842	ATPase activity
JNX03_RS12405	COG0583	DNA-binding transcription factor activity
JNX03_RS12445	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
JNX03_RS12465	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
JNX03_RS12465	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
JNX03_RS12475	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
JNX03_RS12480	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JNX03_RS12490	COG3214	Protein conserved in bacteria
JNX03_RS12495	COG1609	Transcriptional regulator
JNX03_RS12515	COG0028	Belongs to the TPP enzyme family
JNX03_RS12520	COG2186	Transcriptional regulator
JNX03_RS12530	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JNX03_RS12535	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
JNX03_RS12560	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
JNX03_RS12585	COG5598	trimethylamine methyltransferase
JNX03_RS12595	COG1529	Aldehyde oxidase and xanthine dehydrogenase
JNX03_RS12595	COG2010	Cytochrome c
JNX03_RS12605	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
JNX03_RS12615	COG1522	sequence-specific DNA binding
JNX03_RS12630	COG0028	Belongs to the TPP enzyme family
JNX03_RS12630	COG4032	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
JNX03_RS12640	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JNX03_RS12660	COG1012	belongs to the aldehyde dehydrogenase family
JNX03_RS12670	COG0318	PFAM AMP-dependent synthetase and ligase
JNX03_RS12675	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
JNX03_RS12690	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JNX03_RS12700	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
JNX03_RS12705	COG1595	DNA-templated transcription, initiation
JNX03_RS12710	COG3806	Anti-sigma factor
JNX03_RS12720	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
JNX03_RS12725	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JNX03_RS12745	COG0625	glutathione transferase activity
JNX03_RS12750	COG2808	Putative FMN-binding domain
JNX03_RS12760	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
JNX03_RS12770	COG4143	(ABC) transporter
JNX03_RS12775	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
JNX03_RS12790	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS12795	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JNX03_RS12800	COG1846	Transcriptional regulator
JNX03_RS12805	COG0745	RESPONSE REGULATOR receiver
JNX03_RS12810	COG1722	exodeoxyribonuclease VII activity
JNX03_RS12815	COG0142	geranyltranstransferase activity
JNX03_RS12820	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JNX03_RS12840	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
JNX03_RS12870	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
JNX03_RS12875	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JNX03_RS12890	COG0697	spore germination
JNX03_RS12900	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JNX03_RS12905	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JNX03_RS12915	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JNX03_RS12925	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JNX03_RS12975	COG1228	amidohydrolase
JNX03_RS13045	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS13055	COG1414	Transcriptional regulator
JNX03_RS13060	COG0183	Belongs to the thiolase family
JNX03_RS13065	COG3396	Phenylacetate-CoA oxygenase
JNX03_RS13070	COG3460	Phenylacetate-CoA oxygenase
JNX03_RS13075	COG3396	Phenylacetate-CoA oxygenase
JNX03_RS13080	COG2151	metal-sulfur cluster biosynthetic enzyme
JNX03_RS13085	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JNX03_RS13090	COG2030	dehydratase
JNX03_RS13090	COG1012	belongs to the aldehyde dehydrogenase family
JNX03_RS13095	COG3327	negative regulation of DNA-templated transcription, initiation
JNX03_RS13100	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
JNX03_RS13105	COG0517	IMP dehydrogenase activity
JNX03_RS13105	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
JNX03_RS13120	COG1137	ATPase activity
JNX03_RS13125	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JNX03_RS13130	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JNX03_RS13155	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JNX03_RS13170	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
JNX03_RS13190	COG0443	Heat shock 70 kDa protein
JNX03_RS13195	COG0484	heat shock protein binding
JNX03_RS13205	COG2003	Belongs to the UPF0758 family
JNX03_RS13220	COG0653	protein targeting
JNX03_RS13225	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JNX03_RS13230	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
JNX03_RS13235	COG0494	nUDIX hydrolase
JNX03_RS13240	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
JNX03_RS13255	COG0779	Required for maturation of 30S ribosomal subunits
JNX03_RS13260	COG4166	transmembrane transport
JNX03_RS13270	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JNX03_RS13280	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JNX03_RS13320	COG3034	peptidoglycan biosynthetic process
JNX03_RS13330	COG1132	(ABC) transporter
JNX03_RS13335	COG1132	(ABC) transporter
JNX03_RS13340	COG0617	tRNA 3'-terminal CCA addition
JNX03_RS13355	COG0494	nUDIX hydrolase
JNX03_RS13360	COG0745	RESPONSE REGULATOR receiver
JNX03_RS13370	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS13375	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JNX03_RS13380	COG0137	argininosuccinate synthase activity
JNX03_RS13395	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JNX03_RS13400	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JNX03_RS13405	COG0280	phosphate acetyltransferase
JNX03_RS13405	COG0281	malic enzyme
JNX03_RS13415	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
JNX03_RS13420	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
JNX03_RS13425	COG1420	regulation of RNA biosynthetic process
JNX03_RS13430	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
JNX03_RS13435	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
JNX03_RS13440	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JNX03_RS13455	COG0357	Ribosomal RNA small subunit methyltransferase G
JNX03_RS13460	COG0445	tRNA wobble uridine modification
JNX03_RS13465	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
JNX03_RS13470	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
JNX03_RS13475	COG1981	membrane
JNX03_RS13480	COG0424	maF-like protein
JNX03_RS13485	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JNX03_RS13490	COG0237	dephospho-CoA kinase activity
JNX03_RS13495	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JNX03_RS13500	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
JNX03_RS13530	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
JNX03_RS13535	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
JNX03_RS13550	COG1074	ATP-dependent DNA helicase activity
JNX03_RS13560	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
JNX03_RS13565	COG3178	'Phosphotransferase
JNX03_RS13570	COG0802	atpase or kinase
JNX03_RS13585	COG1999	signal sequence binding
JNX03_RS13590	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
JNX03_RS13600	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
JNX03_RS13610	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
JNX03_RS13640	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
JNX03_RS13645	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
JNX03_RS13680	COG1960	acyl-CoA dehydrogenase activity
JNX03_RS13710	COG0463	Glycosyl transferase, family 2
JNX03_RS13710	COG1216	Glycosyl transferase, family 2
JNX03_RS13740	COG0438	transferase activity, transferring glycosyl groups
JNX03_RS13760	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
JNX03_RS13765	COG1088	dTDP-glucose 4,6-dehydratase activity
JNX03_RS13770	COG1091	dTDP-4-dehydrorhamnose reductase activity
JNX03_RS13780	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
JNX03_RS13780	COG0662	Cupin 2, conserved barrel domain protein
JNX03_RS13800	COG0179	Fumarylacetoacetate (FAA) hydrolase
JNX03_RS13815	COG3191	aminopeptidase activity
JNX03_RS13830	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNX03_RS13860	COG0747	negative chemotaxis
JNX03_RS13875	COG2116	formate transmembrane transporter activity
JNX03_RS13880	COG1295	ribonuclease BN
JNX03_RS13890	COG0069	glutamate synthase activity
JNX03_RS13895	COG1804	L-carnitine dehydratase bile acid-inducible protein F
JNX03_RS13905	COG2995	paraquat-inducible protein a
JNX03_RS13910	COG3008	intermembrane lipid transfer
JNX03_RS13910	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
JNX03_RS13925	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JNX03_RS13935	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JNX03_RS13940	COG0268	Binds directly to 16S ribosomal RNA
JNX03_RS13945	COG1024	Enoyl-CoA hydratase
JNX03_RS13950	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
JNX03_RS13955	COG2226	methyltransferase
JNX03_RS13965	COG0183	Belongs to the thiolase family
JNX03_RS13970	COG1396	sequence-specific DNA binding
JNX03_RS13975	COG0156	8-amino-7-oxononanoate synthase activity
JNX03_RS13980	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JNX03_RS13985	COG1063	alcohol dehydrogenase
JNX03_RS13995	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
JNX03_RS14010	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JNX03_RS14015	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
JNX03_RS14020	COG0560	Phosphoserine phosphatase
JNX03_RS14050	COG0820	rRNA (adenine-C2-)-methyltransferase activity
JNX03_RS14070	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JNX03_RS14075	COG2171	N-acyltransferase activity
JNX03_RS14100	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JNX03_RS14110	COG0557	exoribonuclease II activity
JNX03_RS14120	COG2378	regulation of single-species biofilm formation
JNX03_RS14125	COG2951	lytic endotransglycosylase activity
JNX03_RS14135	COG1802	Transcriptional regulator
JNX03_RS14145	COG3842	ATPase activity
JNX03_RS14150	COG1176	ABC-type spermidine putrescine transport system, permease component I
JNX03_RS14155	COG1177	transmembrane transport
JNX03_RS14160	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JNX03_RS14165	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
JNX03_RS14185	COG2271	Major facilitator Superfamily
JNX03_RS14190	COG1054	Belongs to the UPF0176 family
JNX03_RS14195	COG1335	isochorismatase
JNX03_RS14205	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JNX03_RS14265	COG2099	Precorrin-6x reductase
JNX03_RS14280	COG2875	Belongs to the precorrin methyltransferase family
JNX03_RS14285	COG1797	cobyrinic acid a,c-diamide synthase activity
JNX03_RS14290	COG1648	precorrin-2 dehydrogenase activity
JNX03_RS14290	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JNX03_RS14320	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
JNX03_RS14340	COG0514	ATP-dependent DNA helicase (RecQ)
JNX03_RS14345	COG3022	response to hydroperoxide
JNX03_RS14350	COG2205	protein histidine kinase activity
JNX03_RS14350	COG0784	Response regulator, receiver
JNX03_RS14350	COG5002	protein histidine kinase activity
JNX03_RS14355	COG2373	Large extracellular alpha-helical protein
JNX03_RS14360	COG4953	penicillin-binding protein 1C
JNX03_RS14400	COG0714	Associated with various cellular activities
JNX03_RS14410	COG3622	Belongs to the hyi family
JNX03_RS14425	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JNX03_RS14425	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JNX03_RS14435	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JNX03_RS14445	COG0793	Belongs to the peptidase S41A family
JNX03_RS14455	COG1595	DNA-templated transcription, initiation
JNX03_RS14475	COG0129	dihydroxy-acid dehydratase activity
JNX03_RS14480	COG1132	(ABC) transporter
JNX03_RS14495	COG0285	dihydrofolate synthase activity
JNX03_RS14505	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
JNX03_RS14520	COG2423	ornithine cyclodeaminase activity
JNX03_RS14530	COG1671	Belongs to the UPF0178 family
JNX03_RS14535	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
JNX03_RS14565	COG2050	protein possibly involved in aromatic compounds catabolism
JNX03_RS14575	COG0791	NLP P60 protein
JNX03_RS14580	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
JNX03_RS14590	COG0288	reversible hydration of carbon dioxide
JNX03_RS14610	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JNX03_RS14640	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JNX03_RS14665	COG1194	a g-specific adenine glycosylase
JNX03_RS14685	COG1663	tetraacyldisaccharide 4'-kinase activity
JNX03_RS14690	COG1519	Transferase
JNX03_RS14705	COG0312	modulator of DNA gyrase
JNX03_RS14730	COG1196	nuclear chromosome segregation
JNX03_RS14730	COG3264	Mechanosensitive ion channel
JNX03_RS14735	COG2081	HI0933 family
JNX03_RS14755	COG0495	leucyl-tRNA aminoacylation
JNX03_RS14770	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JNX03_RS14785	COG0745	RESPONSE REGULATOR receiver
JNX03_RS14800	COG3118	belongs to the thioredoxin family
JNX03_RS14810	COG2835	tetraacyldisaccharide 4'-kinase activity
JNX03_RS14815	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JNX03_RS14820	COG0154	amidase activity
JNX03_RS14825	COG0436	Aminotransferase
JNX03_RS14830	COG1674	ftsk spoiiie
JNX03_RS14855	COG0405	Gamma-glutamyltransferase
JNX03_RS14865	COG1366	Belongs to the anti-sigma-factor antagonist family
JNX03_RS14920	COG0564	pseudouridine synthase activity
JNX03_RS14930	COG0450	alkyl hydroperoxide reductase
JNX03_RS14940	COG1185	polyribonucleotide nucleotidyltransferase activity
JNX03_RS14945	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
JNX03_RS14960	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JNX03_RS14965	COG3698	Phosphodiester glycosidase
JNX03_RS14970	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
JNX03_RS14975	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
JNX03_RS15010	COG0138	bifunctional purine biosynthesis protein purh
JNX03_RS15015	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
JNX03_RS15025	COG0612	Peptidase, M16
JNX03_RS15030	COG0612	Peptidase, M16
JNX03_RS15035	COG1012	belongs to the aldehyde dehydrogenase family
JNX03_RS15045	COG0803	Belongs to the bacterial solute-binding protein 9 family
JNX03_RS15050	COG1121	(ABC) transporter
JNX03_RS15055	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JNX03_RS15060	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JNX03_RS15065	COG2351	hydroxyisourate hydrolase activity
JNX03_RS15075	COG3257	ureidoglycine aminohydrolase activity
JNX03_RS15080	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
JNX03_RS15095	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
JNX03_RS15110	COG0625	glutathione transferase activity
JNX03_RS15120	COG3383	formate dehydrogenase (NAD+) activity
JNX03_RS15150	COG0559	Belongs to the binding-protein-dependent transport system permease family
JNX03_RS15170	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
JNX03_RS15175	COG1178	ABC-type Fe3 transport system permease component
JNX03_RS15185	COG1840	ABC-type Fe3 transport system, periplasmic component
JNX03_RS15190	COG0625	glutathione transferase activity
JNX03_RS15195	COG0384	phenazine biosynthesis protein PhzF
JNX03_RS15200	COG0257	Belongs to the bacterial ribosomal protein bL36 family
JNX03_RS15225	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JNX03_RS15235	COG0284	orotidine-5'-phosphate decarboxylase activity
JNX03_RS15250	COG0519	Catalyzes the synthesis of GMP from XMP
JNX03_RS15255	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JNX03_RS15260	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
JNX03_RS15270	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
JNX03_RS15315	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
JNX03_RS15345	COG0745	RESPONSE REGULATOR receiver
JNX03_RS15350	COG0346	lactoylglutathione lyase activity
JNX03_RS15365	COG0778	Nitroreductase
JNX03_RS15370	COG2514	catechol 2,3-dioxygenase activity
JNX03_RS15375	COG0180	Tryptophanyl-tRNA synthetase
JNX03_RS15395	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
JNX03_RS15405	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JNX03_RS15410	COG0792	nuclease activity
JNX03_RS15415	COG0189	ligase activity
JNX03_RS15420	COG0657	acetylesterase activity
JNX03_RS15425	COG0606	chelatase, subunit chli
JNX03_RS15450	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JNX03_RS15455	COG0756	dUTP diphosphatase activity
JNX03_RS15460	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JNX03_RS15465	COG5507	3-demethylubiquinone-9 3-methyltransferase
JNX03_RS15470	COG0339	signal peptide processing
JNX03_RS15475	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JNX03_RS15485	COG0772	Belongs to the SEDS family
JNX03_RS15490	COG0768	penicillin binding
JNX03_RS15515	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JNX03_RS15525	COG3046	protein related to deoxyribodipyrimidine photolyase
JNX03_RS15580	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JNX03_RS15595	COG0404	The glycine cleavage system catalyzes the degradation of glycine
JNX03_RS15600	COG0509	glycine decarboxylation via glycine cleavage system
JNX03_RS15605	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
JNX03_RS15605	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
JNX03_RS15610	COG0483	inositol monophosphate 1-phosphatase activity
JNX03_RS15620	COG4181	ATPase activity
JNX03_RS15635	COG0493	'glutamate synthase
JNX03_RS15655	COG1309	transcriptional regulator
JNX03_RS15685	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JNX03_RS15690	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JNX03_RS15695	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JNX03_RS15705	COG1376	ErfK ybiS ycfS ynhG family protein
JNX03_RS15710	COG1278	Cold shock
JNX03_RS15720	COG0488	(ABC) transporter
JNX03_RS15730	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JNX03_RS15760	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
JNX03_RS15790	COG0556	nucleotide-excision repair
JNX03_RS15800	COG0454	-acetyltransferase
JNX03_RS15820	COG3842	ATPase activity
JNX03_RS15840	COG1177	transmembrane transport
JNX03_RS15855	COG2951	lytic endotransglycosylase activity
JNX03_RS15860	COG0745	RESPONSE REGULATOR receiver
JNX03_RS15865	COG3437	response regulator, receiver
JNX03_RS15865	COG4999	Histidine kinase
JNX03_RS15865	COG3850	Histidine kinase
JNX03_RS15865	COG2205	protein histidine kinase activity
JNX03_RS15885	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
JNX03_RS15890	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
JNX03_RS15910	COG0765	amino acid transport
JNX03_RS15920	COG0028	Belongs to the TPP enzyme family
JNX03_RS15960	COG4948	Mandelate Racemase Muconate Lactonizing
JNX03_RS15965	COG0583	DNA-binding transcription factor activity
JNX03_RS15975	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
JNX03_RS15985	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
JNX03_RS15990	COG0066	3-isopropylmalate dehydratase activity
JNX03_RS16025	COG2814	Major facilitator Superfamily
JNX03_RS16090	COG0596	Alpha beta hydrolase
JNX03_RS16130	COG0604	alcohol dehydrogenase
JNX03_RS16130	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS16130	COG3321	synthase
JNX03_RS16135	COG0596	Alpha beta hydrolase
JNX03_RS16145	COG2186	Transcriptional regulator
JNX03_RS16150	COG3842	ATPase activity
JNX03_RS16155	COG1175	transmembrane transport
JNX03_RS16160	COG0395	ABC-type sugar transport system, permease component
JNX03_RS16185	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS16200	COG0596	Alpha beta hydrolase
JNX03_RS16210	COG0582	viral genome integration into host DNA
JNX03_RS16260	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JNX03_RS16275	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JNX03_RS16280	COG5328	Belongs to the UPF0262 family
JNX03_RS16295	COG0305	Participates in initiation and elongation during chromosome replication
JNX03_RS16315	COG0481	GTPase activity
JNX03_RS16330	COG2824	Alkylphosphonate utilization operon protein PhnA
JNX03_RS16335	COG3246	L-lysine catabolic process to acetate
JNX03_RS16355	COG0588	phosphoglycerate mutase activity
JNX03_RS16360	COG0438	transferase activity, transferring glycosyl groups
JNX03_RS16375	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
JNX03_RS16380	COG0668	transmembrane transport
JNX03_RS16385	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
JNX03_RS16390	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNX03_RS16395	COG0601	transmembrane transport
JNX03_RS16400	COG0747	negative chemotaxis
JNX03_RS16420	COG1250	3-hydroxyacyl-CoA dehydrogenase
JNX03_RS16420	COG1024	Enoyl-CoA hydratase
JNX03_RS16425	COG0183	Belongs to the thiolase family
JNX03_RS16430	COG1960	acyl-CoA dehydrogenase activity
JNX03_RS16435	COG1960	acyl-CoA dehydrogenase activity
JNX03_RS16445	COG1024	Enoyl-CoA hydratase
JNX03_RS16450	COG0318	PFAM AMP-dependent synthetase and ligase
JNX03_RS16460	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JNX03_RS16480	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JNX03_RS16500	COG3119	arylsulfatase activity
JNX03_RS16505	COG2391	methyltransferase activity
JNX03_RS16520	COG0785	Cytochrome C biogenesis protein
JNX03_RS16545	COG3258	Cytochrome c
JNX03_RS16550	COG0737	Belongs to the 5'-nucleotidase family
JNX03_RS16570	COG0446	pyridine nucleotide-disulphide oxidoreductase
JNX03_RS16580	COG2391	methyltransferase activity
JNX03_RS16620	COG0436	Aminotransferase
JNX03_RS16625	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JNX03_RS16665	COG0174	glutamine synthetase
JNX03_RS16720	COG0800	Aldolase
JNX03_RS16725	COG3734	2-keto-3-deoxy-galactonokinase
JNX03_RS16730	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS16735	COG0129	dihydroxy-acid dehydratase activity
JNX03_RS16750	COG1175	transmembrane transport
JNX03_RS16775	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JNX03_RS16790	COG4575	ribosome binding
JNX03_RS16795	COG5487	UPF0391 membrane protein
JNX03_RS16800	COG0784	Response regulator, receiver
JNX03_RS16820	COG0628	permease
JNX03_RS16830	COG1959	2 iron, 2 sulfur cluster binding
JNX03_RS16850	COG0395	ABC-type sugar transport system, permease component
JNX03_RS16855	COG1175	transmembrane transport
JNX03_RS16860	COG3842	ATPase activity
JNX03_RS16865	COG3842	ATPase activity
JNX03_RS16870	COG0300	oxidoreductase activity
JNX03_RS16880	COG3958	Transketolase
JNX03_RS16885	COG3959	Transketolase, thiamine diphosphate binding domain
JNX03_RS16890	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS16895	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS16915	COG0840	transmembrane signaling receptor activity
JNX03_RS16930	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
JNX03_RS16945	COG2186	Transcriptional regulator
JNX03_RS16955	COG1172	Belongs to the binding-protein-dependent transport system permease family
JNX03_RS16965	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS16970	COG2017	converts alpha-aldose to the beta-anomer
JNX03_RS16975	COG3386	PFAM SMP-30 Gluconolaconase
JNX03_RS16985	COG0129	dihydroxy-acid dehydratase activity
JNX03_RS16990	COG0179	Fumarylacetoacetate (FAA) hydrolase
JNX03_RS16995	COG0148	phosphopyruvate hydratase activity
JNX03_RS17025	COG0747	negative chemotaxis
JNX03_RS17035	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNX03_RS17040	COG0444	Belongs to the ABC transporter superfamily
JNX03_RS17045	COG4608	Belongs to the ABC transporter superfamily
JNX03_RS17050	COG0747	negative chemotaxis
JNX03_RS17055	COG0402	S-adenosylhomocysteine deaminase activity
JNX03_RS17065	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JNX03_RS17090	COG0395	ABC-type sugar transport system, permease component
JNX03_RS17095	COG3842	ATPase activity
JNX03_RS17100	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JNX03_RS17105	COG1609	Transcriptional regulator
JNX03_RS17115	COG0154	amidase activity
JNX03_RS17125	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JNX03_RS17135	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JNX03_RS17140	COG0563	adenylate kinase activity
JNX03_RS17150	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JNX03_RS17165	COG5002	protein histidine kinase activity
JNX03_RS17165	COG2176	DNA-directed DNA polymerase activity
JNX03_RS17175	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JNX03_RS17185	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
JNX03_RS17190	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JNX03_RS17200	COG0765	amino acid transport
JNX03_RS17205	COG0765	amino acid transport
JNX03_RS17210	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JNX03_RS17215	COG0583	DNA-binding transcription factor activity
JNX03_RS17230	COG2268	Band 7 protein
JNX03_RS17250	COG0411	ABC transporter
JNX03_RS17260	COG0318	PFAM AMP-dependent synthetase and ligase
JNX03_RS17265	COG1609	Transcriptional regulator
JNX03_RS17300	COG1172	Belongs to the binding-protein-dependent transport system permease family
JNX03_RS17305	COG1129	ABC transporter
JNX03_RS17310	COG1879	ABC-type sugar transport system periplasmic component
JNX03_RS17315	COG1082	Xylose isomerase domain protein TIM barrel
JNX03_RS17320	COG0673	inositol 2-dehydrogenase activity
JNX03_RS17325	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS17330	COG1609	Transcriptional regulator
JNX03_RS17335	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS17350	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
JNX03_RS17360	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JNX03_RS17370	COG0673	inositol 2-dehydrogenase activity
JNX03_RS17375	COG0395	ABC-type sugar transport system, permease component
JNX03_RS17380	COG1175	transmembrane transport
JNX03_RS17390	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
JNX03_RS17395	COG2188	Transcriptional regulator
JNX03_RS17400	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
JNX03_RS17405	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JNX03_RS17425	COG1335	isochorismatase
JNX03_RS17460	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JNX03_RS17470	COG3457	Alanine racemase
JNX03_RS17520	COG3842	ATPase activity
JNX03_RS17525	COG1176	ABC-type spermidine putrescine transport system, permease component I
JNX03_RS17530	COG1177	transmembrane transport
JNX03_RS17615	COG0457	Tetratricopeptide repeat
JNX03_RS17660	COG0604	alcohol dehydrogenase
JNX03_RS17665	COG0596	Alpha beta hydrolase
JNX03_RS17680	COG0405	Gamma-glutamyltransferase
JNX03_RS17685	COG0277	FAD linked oxidase domain protein
JNX03_RS17690	COG5001	Diguanylate cyclase
JNX03_RS17690	COG3300	MHYT domain
JNX03_RS17710	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JNX03_RS17715	COG0667	Aldo Keto reductase
JNX03_RS17725	COG1917	Cupin 2, conserved barrel domain protein
JNX03_RS17780	COG2070	2-Nitropropane dioxygenase
JNX03_RS17790	COG1079	Belongs to the binding-protein-dependent transport system permease family
JNX03_RS17795	COG4603	Belongs to the binding-protein-dependent transport system permease family
JNX03_RS17800	COG3845	ABC transporter
JNX03_RS17810	COG1529	Aldehyde oxidase and xanthine dehydrogenase
JNX03_RS17835	COG0124	histidyl-tRNA synthetase
JNX03_RS17840	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
JNX03_RS17845	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
JNX03_RS17880	COG3845	ABC transporter
JNX03_RS17885	COG4603	Belongs to the binding-protein-dependent transport system permease family
JNX03_RS17890	COG1079	Belongs to the binding-protein-dependent transport system permease family
JNX03_RS17895	COG0402	S-adenosylhomocysteine deaminase activity
JNX03_RS17920	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNX03_RS17925	COG0165	Argininosuccinate lyase
JNX03_RS17945	COG0019	diaminopimelate decarboxylase activity
JNX03_RS17960	COG2884	Cell division ATP-binding protein ftsE
JNX03_RS18005	COG0508	dehydrogenase complex catalyzes the overall conversion of
JNX03_RS18010	COG0567	Dehydrogenase, E1 component
JNX03_RS18015	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
JNX03_RS18030	COG0045	succinate-CoA ligase (ADP-forming) activity
JNX03_RS18035	COG2030	dehydratase
JNX03_RS18050	COG2301	Belongs to the HpcH HpaI aldolase family
JNX03_RS18070	COG0039	L-malate dehydrogenase activity
JNX03_RS18120	COG0813	purine-nucleoside phosphorylase activity
JNX03_RS18130	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
JNX03_RS18130	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
JNX03_RS18140	COG0604	alcohol dehydrogenase
JNX03_RS18155	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JNX03_RS18160	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS18170	COG0730	response to heat
JNX03_RS18175	COG1079	Belongs to the binding-protein-dependent transport system permease family
JNX03_RS18180	COG4603	Belongs to the binding-protein-dependent transport system permease family
JNX03_RS18185	COG3845	ABC transporter
JNX03_RS18190	COG1744	ABC transporter substrate-binding protein PnrA-like
JNX03_RS18205	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
JNX03_RS18215	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JNX03_RS18240	COG1272	protein, Hemolysin III
JNX03_RS18255	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JNX03_RS18265	COG0133	tryptophan synthase activity
JNX03_RS18285	COG0193	aminoacyl-tRNA hydrolase activity
JNX03_RS18290	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
JNX03_RS18305	COG1304	FMN binding
JNX03_RS18330	COG0159	tryptophan synthase activity
JNX03_RS18340	COG0012	GTP binding
JNX03_RS18360	COG0179	Fumarylacetoacetate (FAA) hydrolase
JNX03_RS18365	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
JNX03_RS18405	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JNX03_RS18430	COG1012	belongs to the aldehyde dehydrogenase family
JNX03_RS18435	COG5441	Belongs to the UPF0261 family
JNX03_RS18450	COG1012	belongs to the aldehyde dehydrogenase family
JNX03_RS18465	COG0179	Fumarylacetoacetate (FAA) hydrolase
JNX03_RS18470	COG3971	2-oxopent-4-enoate hydratase activity
JNX03_RS18480	COG2244	polysaccharide biosynthetic process
JNX03_RS18490	COG3321	synthase
JNX03_RS18490	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS18490	COG0604	alcohol dehydrogenase
JNX03_RS18545	COG4175	Glycine betaine
JNX03_RS18545	COG3448	diguanylate cyclase activity
JNX03_RS18550	COG4176	ABC-type proline glycine betaine transport system permease component
JNX03_RS18565	COG1609	Transcriptional regulator
JNX03_RS18585	COG3916	Acyl-homoserine-lactone synthase
JNX03_RS18670	COG0785	Cytochrome C biogenesis protein
JNX03_RS18695	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNX03_RS18700	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNX03_RS18740	COG0789	Transcriptional regulator
JNX03_RS18745	COG1999	signal sequence binding
JNX03_RS18755	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JNX03_RS18755	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
JNX03_RS18765	COG1999	signal sequence binding
JNX03_RS18790	COG0815	Transfers the fatty acyl group on membrane lipoproteins
JNX03_RS18795	COG3034	peptidoglycan biosynthetic process
JNX03_RS18825	COG1321	iron dependent repressor
JNX03_RS18830	COG2132	Multicopper oxidase
JNX03_RS18860	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JNX03_RS18875	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JNX03_RS18885	COG1192	Involved in chromosome partitioning
JNX03_RS18890	COG1475	DNA binding
JNX03_RS18895	COG1414	Transcriptional regulator
JNX03_RS19005	COG4948	Mandelate Racemase Muconate Lactonizing
JNX03_RS19025	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JNX03_RS19030	COG1737	Transcriptional regulator
JNX03_RS19035	COG4974	Belongs to the 'phage' integrase family
JNX03_RS19045	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JNX03_RS19120	COG4962	Type ii secretion system protein e
JNX03_RS19145	COG1196	nuclear chromosome segregation
JNX03_RS19145	COG0739	heme binding
JNX03_RS19145	COG0741	lytic transglycosylase activity
JNX03_RS19170	COG1196	nuclear chromosome segregation
JNX03_RS19170	COG0739	heme binding
JNX03_RS19170	COG0741	lytic transglycosylase activity
JNX03_RS19230	COG1228	amidohydrolase
JNX03_RS19235	COG0523	cobalamin synthesis protein
JNX03_RS19320	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
JNX03_RS19380	COG1363	Peptidase, m42
JNX03_RS19400	COG4172	Belongs to the ABC transporter superfamily
JNX03_RS19405	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNX03_RS19410	COG0601	transmembrane transport
JNX03_RS19445	COG3609	addiction module antidote protein, CC2985 family
JNX03_RS19455	COG1192	Involved in chromosome partitioning
JNX03_RS19490	COG4608	Belongs to the ABC transporter superfamily
JNX03_RS19495	COG0444	Belongs to the ABC transporter superfamily
JNX03_RS19505	COG0601	transmembrane transport
JNX03_RS19510	COG0747	negative chemotaxis
JNX03_RS19515	COG0837	glucose binding
JNX03_RS19515	COG1737	Transcriptional regulator
JNX03_RS19525	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
JNX03_RS19530	COG3474	cytochrome
JNX03_RS19545	COG1172	Belongs to the binding-protein-dependent transport system permease family
JNX03_RS19550	COG1129	ABC transporter
JNX03_RS19570	COG1846	Transcriptional regulator
JNX03_RS19575	COG0408	coproporphyrinogen oxidase activity
JNX03_RS19580	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
JNX03_RS19590	COG1024	Enoyl-CoA hydratase
JNX03_RS19595	COG1960	acyl-CoA dehydrogenase activity
JNX03_RS19605	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
JNX03_RS19615	COG0626	cystathionine gamma-synthase activity
JNX03_RS19625	COG1522	sequence-specific DNA binding
JNX03_RS19635	COG0318	PFAM AMP-dependent synthetase and ligase
JNX03_RS19640	COG1250	3-hydroxyacyl-CoA dehydrogenase
JNX03_RS19640	COG1024	Enoyl-CoA hydratase
JNX03_RS19655	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS19660	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS19670	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JNX03_RS19675	COG1946	Acyl-CoA thioesterase
JNX03_RS19680	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JNX03_RS19690	COG1131	(ABC) transporter
JNX03_RS19740	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS19750	COG1960	acyl-CoA dehydrogenase activity
JNX03_RS19755	COG1960	acyl-CoA dehydrogenase activity
JNX03_RS19760	COG3321	synthase
JNX03_RS19760	COG0604	alcohol dehydrogenase
JNX03_RS19760	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS19770	COG2130	NADP-dependent
JNX03_RS19780	COG0181	hydroxymethylbilane synthase activity
JNX03_RS19785	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
JNX03_RS19815	COG1595	DNA-templated transcription, initiation
JNX03_RS19835	COG2020	methyltransferase activity
JNX03_RS19840	COG1116	anion transmembrane transporter activity
JNX03_RS19880	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
JNX03_RS19935	COG1459	type II secretion system
JNX03_RS19970	COG1706	bacterial-type flagellum-dependent cell motility
JNX03_RS19985	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JNX03_RS20000	COG1558	bacterial-type flagellum-dependent cell motility
JNX03_RS20005	COG1677	Flagellar hook-basal body complex protein FliE
JNX03_RS20020	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JNX03_RS20030	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JNX03_RS20055	COG1766	The M ring may be actively involved in energy transduction
JNX03_RS20065	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JNX03_RS20070	COG1338	Plays a role in the flagellum-specific transport system
JNX03_RS20075	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JNX03_RS20085	COG5443	negative regulation of bacterial-type flagellum assembly
JNX03_RS20090	COG5442	Flagellar protein FlaF
JNX03_RS20175	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
JNX03_RS20185	COG0747	negative chemotaxis
JNX03_RS20195	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNX03_RS20200	COG0444	Belongs to the ABC transporter superfamily
JNX03_RS20210	COG1475	DNA binding
JNX03_RS20215	COG1192	Involved in chromosome partitioning
JNX03_RS20230	COG0436	Aminotransferase
JNX03_RS20235	COG1028	Short-chain dehydrogenase reductase Sdr
JNX03_RS20245	COG0436	Aminotransferase
JNX03_RS20270	COG1846	Transcriptional regulator
JNX03_RS20345	COG4977	sequence-specific DNA binding
JNX03_RS20360	COG2515	1-aminocyclopropane-1-carboxylate deaminase
JNX03_RS20375	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JNX03_RS20395	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
JNX03_RS20435	COG0745	RESPONSE REGULATOR receiver
JNX03_RS20515	COG2264	protein methyltransferase activity
JNX03_RS20520	COG1132	(ABC) transporter
JNX03_RS20540	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family