locus-tag	class	description
JNX02_RS00035	COG5002	protein histidine kinase activity
JNX02_RS00040	COG2202	Pas domain
JNX02_RS00040	COG2205	protein histidine kinase activity
JNX02_RS00045	COG0745	RESPONSE REGULATOR receiver
JNX02_RS00055	COG0745	RESPONSE REGULATOR receiver
JNX02_RS00060	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JNX02_RS00080	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
JNX02_RS00100	COG1643	Atp-dependent helicase
JNX02_RS00105	COG1703	isobutyryl-CoA mutase activity
JNX02_RS00120	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
JNX02_RS00160	COG0632	four-way junction helicase activity
JNX02_RS00165	COG2255	four-way junction helicase activity
JNX02_RS00175	COG0824	Thioesterase
JNX02_RS00195	COG0823	Involved in the tonB-independent uptake of proteins
JNX02_RS00200	COG2885	chlorophyll binding
JNX02_RS00210	COG0037	tRNA processing
JNX02_RS00215	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JNX02_RS00225	COG2759	Belongs to the formate--tetrahydrofolate ligase family
JNX02_RS00230	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
JNX02_RS00235	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
JNX02_RS00260	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JNX02_RS00270	COG1201	RNA secondary structure unwinding
JNX02_RS00320	COG4964	Belongs to the GSP D family
JNX02_RS00335	COG0741	lytic transglycosylase activity
JNX02_RS00355	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JNX02_RS00355	COG1754	DNA topoisomerase type I activity
JNX02_RS00360	COG0758	DNA mediated transformation
JNX02_RS00365	COG0312	modulator of DNA gyrase
JNX02_RS00375	COG0109	protoheme IX farnesyltransferase activity
JNX02_RS00385	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
JNX02_RS00395	COG3346	SURF1 family
JNX02_RS00405	COG0612	Peptidase, M16
JNX02_RS00420	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JNX02_RS00425	COG1280	lysine exporter protein (LysE YggA)
JNX02_RS00430	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
JNX02_RS00435	COG0659	secondary active sulfate transmembrane transporter activity
JNX02_RS00440	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JNX02_RS00455	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
JNX02_RS00460	COG4149	molybdate abc transporter
JNX02_RS00465	COG0725	ABC transporter, periplasmic molybdate-binding protein
JNX02_RS00480	COG0300	oxidoreductase activity
JNX02_RS00495	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JNX02_RS00510	COG1228	amidohydrolase
JNX02_RS00515	COG2986	histidine ammonia-lyase
JNX02_RS00525	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
JNX02_RS00535	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
JNX02_RS00550	COG1492	cobalamin metabolic process
JNX02_RS00560	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JNX02_RS00565	COG0354	folic acid binding
JNX02_RS00575	COG1132	(ABC) transporter
JNX02_RS00580	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
JNX02_RS00590	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JNX02_RS00605	COG0525	valine-tRNA ligase activity
JNX02_RS00630	COG0583	DNA-binding transcription factor activity
JNX02_RS00635	COG2130	NADP-dependent
JNX02_RS00640	COG0483	inositol monophosphate 1-phosphatase activity
JNX02_RS00660	COG1522	sequence-specific DNA binding
JNX02_RS00675	COG0431	NADPH-dependent FMN reductase
JNX02_RS00680	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JNX02_RS00685	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
JNX02_RS00695	COG3842	ATPase activity
JNX02_RS00700	COG0395	ABC-type sugar transport system, permease component
JNX02_RS00705	COG1175	transmembrane transport
JNX02_RS00730	COG1473	amidohydrolase
JNX02_RS00780	COG4263	nitrous-oxide reductase activity
JNX02_RS00810	COG0446	pyridine nucleotide-disulphide oxidoreductase
JNX02_RS00810	COG1902	pentaerythritol trinitrate reductase activity
JNX02_RS00815	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
JNX02_RS00825	COG0840	transmembrane signaling receptor activity
JNX02_RS00830	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JNX02_RS00835	COG2814	Major facilitator Superfamily
JNX02_RS00840	COG0667	Aldo Keto reductase
JNX02_RS00850	COG3246	L-lysine catabolic process to acetate
JNX02_RS00860	COG0824	Thioesterase
JNX02_RS00860	COG1250	3-hydroxyacyl-CoA dehydrogenase
JNX02_RS00865	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS00905	COG1595	DNA-templated transcription, initiation
JNX02_RS00940	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JNX02_RS00945	COG2169	Transcriptional regulator
JNX02_RS00945	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JNX02_RS00950	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
JNX02_RS00955	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JNX02_RS00965	COG0446	pyridine nucleotide-disulphide oxidoreductase
JNX02_RS00965	COG0404	The glycine cleavage system catalyzes the degradation of glycine
JNX02_RS00980	COG0358	DNA primase activity
JNX02_RS00985	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JNX02_RS01005	COG0432	Pfam Uncharacterised protein family UPF0047
JNX02_RS01010	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JNX02_RS01015	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JNX02_RS01015	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JNX02_RS01045	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JNX02_RS01045	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JNX02_RS01050	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
JNX02_RS01055	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JNX02_RS01105	COG0564	pseudouridine synthase activity
JNX02_RS01120	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JNX02_RS01125	COG2832	Protein of unknown function (DUF454)
JNX02_RS01135	COG1793	dna ligase
JNX02_RS01135	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
JNX02_RS01165	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
JNX02_RS01170	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
JNX02_RS01180	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
JNX02_RS01185	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
JNX02_RS01240	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JNX02_RS01250	COG1832	CoA-binding protein
JNX02_RS01255	COG0140	phosphoribosyl-ATP diphosphatase activity
JNX02_RS01260	COG0107	imidazoleglycerol-phosphate synthase activity
JNX02_RS01265	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
JNX02_RS01280	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
JNX02_RS01285	COG0131	Imidazoleglycerol-phosphate dehydratase
JNX02_RS01315	COG3788	relative of glutathione S-transferase, MAPEG superfamily
JNX02_RS01335	COG0321	lipoyl(octanoyl) transferase activity
JNX02_RS01385	COG1280	lysine exporter protein (LysE YggA)
JNX02_RS01390	COG1609	Transcriptional regulator
JNX02_RS01395	COG1879	ABC-type sugar transport system periplasmic component
JNX02_RS01405	COG1172	Belongs to the binding-protein-dependent transport system permease family
JNX02_RS01410	COG1172	Belongs to the binding-protein-dependent transport system permease family
JNX02_RS01415	COG4948	Mandelate Racemase Muconate Lactonizing
JNX02_RS01420	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS01425	COG2017	converts alpha-aldose to the beta-anomer
JNX02_RS01430	COG4608	Belongs to the ABC transporter superfamily
JNX02_RS01435	COG0444	Belongs to the ABC transporter superfamily
JNX02_RS01440	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNX02_RS01445	COG0601	transmembrane transport
JNX02_RS01450	COG0747	negative chemotaxis
JNX02_RS01460	COG0583	DNA-binding transcription factor activity
JNX02_RS01465	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JNX02_RS01470	COG0129	dihydroxy-acid dehydratase activity
JNX02_RS01475	COG0800	Aldolase
JNX02_RS01495	COG4251	negative regulation of phosphorylation
JNX02_RS01505	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JNX02_RS01640	COG0433	COG0433 Predicted ATPase
JNX02_RS01650	COG2948	multi-organism process
JNX02_RS01665	COG3846	protein secretion by the type IV secretion system
JNX02_RS01680	COG3451	type IV secretory pathway VirB4
JNX02_RS01695	COG4962	Type ii secretion system protein e
JNX02_RS01705	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JNX02_RS01730	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
JNX02_RS01735	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
JNX02_RS01760	COG0741	lytic transglycosylase activity
JNX02_RS01815	COG5489	Protein of unknown function (DUF736)
JNX02_RS01860	COG4974	Belongs to the 'phage' integrase family
JNX02_RS01865	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JNX02_RS01870	COG0730	response to heat
JNX02_RS01890	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JNX02_RS01895	COG4235	cytochrome complex assembly
JNX02_RS01900	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JNX02_RS01925	COG0404	The glycine cleavage system catalyzes the degradation of glycine
JNX02_RS01925	COG0446	pyridine nucleotide-disulphide oxidoreductase
JNX02_RS01965	COG0698	ribose 5-phosphate isomerase
JNX02_RS01970	COG1063	alcohol dehydrogenase
JNX02_RS01975	COG5265	(ABC) transporter
JNX02_RS01980	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JNX02_RS02000	COG1160	GTP binding
JNX02_RS02010	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JNX02_RS02015	COG1862	Preprotein translocase
JNX02_RS02020	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JNX02_RS02025	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JNX02_RS02035	COG3737	Protein of unknown function (DUF498/DUF598)
JNX02_RS02040	COG4133	protoheme IX ABC transporter activity
JNX02_RS02045	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JNX02_RS02050	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JNX02_RS02060	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNX02_RS02070	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
JNX02_RS02085	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JNX02_RS02100	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JNX02_RS02125	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JNX02_RS02130	COG0006	proline dipeptidase activity
JNX02_RS02165	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
JNX02_RS02175	COG0544	peptidyl-prolyl cis-trans isomerase activity
JNX02_RS02195	COG4681	YaeQ
JNX02_RS02205	COG1309	transcriptional regulator
JNX02_RS02220	COG0596	Alpha beta hydrolase
JNX02_RS02235	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JNX02_RS02245	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
JNX02_RS02245	COG0321	lipoyl(octanoyl) transferase activity
JNX02_RS02250	COG0084	hydrolase, TatD family'
JNX02_RS02270	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JNX02_RS02275	COG1686	Belongs to the peptidase S11 family
JNX02_RS02325	COG3909	cytochrome
JNX02_RS02365	COG1072	(Pantothenic acid kinase))
JNX02_RS02395	COG1175	transmembrane transport
JNX02_RS02420	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
JNX02_RS02420	COG1672	PFAM Archaeal ATPase
JNX02_RS02450	COG0251	oxidation-reduction process
JNX02_RS02480	COG1183	phosphatidylcholine synthase activity
JNX02_RS02490	COG0642	Histidine kinase
JNX02_RS02515	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JNX02_RS02520	COG1522	sequence-specific DNA binding
JNX02_RS02525	COG0006	proline dipeptidase activity
JNX02_RS02530	COG3608	succinylglutamate desuccinylase aspartoacylase
JNX02_RS02540	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JNX02_RS02560	COG0348	domain, Protein
JNX02_RS02570	COG2010	Cytochrome c
JNX02_RS02595	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JNX02_RS02600	COG0668	transmembrane transport
JNX02_RS02620	COG4175	Glycine betaine
JNX02_RS02620	COG3448	diguanylate cyclase activity
JNX02_RS02650	COG1510	regulation of RNA biosynthetic process
JNX02_RS02660	COG1960	acyl-CoA dehydrogenase activity
JNX02_RS02670	COG3483	tryptophan 2,3-dioxygenase activity
JNX02_RS02680	COG3485	protocatechuate 3,4-dioxygenase
JNX02_RS02685	COG3485	protocatechuate 3,4-dioxygenase
JNX02_RS02695	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JNX02_RS02700	COG1121	(ABC) transporter
JNX02_RS02710	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
JNX02_RS02725	COG0740	serine-type endopeptidase activity
JNX02_RS02730	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
JNX02_RS02740	COG2264	protein methyltransferase activity
JNX02_RS02755	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
JNX02_RS02760	COG0439	Biotin carboxylase
JNX02_RS02775	COG0410	ABC transporter
JNX02_RS02800	COG1396	sequence-specific DNA binding
JNX02_RS02800	COG3800	Transcriptional regulator
JNX02_RS02805	COG0745	RESPONSE REGULATOR receiver
JNX02_RS02815	COG5002	protein histidine kinase activity
JNX02_RS02835	COG3750	Belongs to the UPF0335 family
JNX02_RS02840	COG0544	peptidyl-prolyl cis-trans isomerase activity
JNX02_RS02845	COG0789	Transcriptional regulator
JNX02_RS02865	COG0359	binds to the 23S rRNA
JNX02_RS02870	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
JNX02_RS02875	COG0360	Binds together with S18 to 16S ribosomal RNA
JNX02_RS02880	COG0534	Mate efflux family protein
JNX02_RS02890	COG2353	YceI-like domain
JNX02_RS02895	COG3038	cytochrome b561
JNX02_RS02900	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JNX02_RS02915	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JNX02_RS02925	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JNX02_RS02930	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JNX02_RS02945	COG4695	Portal protein
JNX02_RS03030	COG0508	dehydrogenase complex catalyzes the overall conversion of
JNX02_RS03035	COG0022	dehydrogenase e1 component
JNX02_RS03035	COG0508	dehydrogenase complex catalyzes the overall conversion of
JNX02_RS03040	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JNX02_RS03045	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
JNX02_RS03050	COG0126	phosphoglycerate kinase activity
JNX02_RS03095	COG0739	heme binding
JNX02_RS03100	COG2833	Protein of unknown function (DUF455)
JNX02_RS03105	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
JNX02_RS03115	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
JNX02_RS03130	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JNX02_RS03140	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
JNX02_RS03155	COG1960	acyl-CoA dehydrogenase activity
JNX02_RS03175	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JNX02_RS03195	COG2354	Protein conserved in bacteria
JNX02_RS03205	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JNX02_RS03225	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
JNX02_RS03240	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
JNX02_RS03285	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
JNX02_RS03305	COG0175	sulfate reduction
JNX02_RS03310	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JNX02_RS03320	COG1648	precorrin-2 dehydrogenase activity
JNX02_RS03320	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JNX02_RS03325	COG1522	sequence-specific DNA binding
JNX02_RS03350	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JNX02_RS03355	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
JNX02_RS03360	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
JNX02_RS03370	COG0149	triose-phosphate isomerase activity
JNX02_RS03380	COG1418	mRNA catabolic process
JNX02_RS03390	COG0316	Belongs to the HesB IscA family
JNX02_RS03395	COG2151	metal-sulfur cluster biosynthetic enzyme
JNX02_RS03405	COG4067	protein conserved in archaea
JNX02_RS03405	COG0189	ligase activity
JNX02_RS03420	COG0343	queuine tRNA-ribosyltransferase activity
JNX02_RS03425	COG1335	isochorismatase
JNX02_RS03430	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
JNX02_RS03440	COG0776	regulation of translation
JNX02_RS03450	COG0406	alpha-ribazole phosphatase activity
JNX02_RS03455	COG0406	alpha-ribazole phosphatase activity
JNX02_RS03510	COG2814	Major facilitator Superfamily
JNX02_RS03515	COG0156	8-amino-7-oxononanoate synthase activity
JNX02_RS03525	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
JNX02_RS03535	COG0436	Aminotransferase
JNX02_RS03540	COG1388	LysM domain
JNX02_RS03540	COG0860	N-Acetylmuramoyl-L-alanine amidase
JNX02_RS03545	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
JNX02_RS03550	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
JNX02_RS03555	COG0154	amidase activity
JNX02_RS03585	COG0028	Belongs to the TPP enzyme family
JNX02_RS03600	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
JNX02_RS03610	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
JNX02_RS03615	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
JNX02_RS03655	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
JNX02_RS03720	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JNX02_RS03730	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JNX02_RS03745	COG0010	Belongs to the arginase family
JNX02_RS03755	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
JNX02_RS03760	COG1238	metal cluster binding
JNX02_RS03790	COG1238	metal cluster binding
JNX02_RS03805	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS03830	COG4536	flavin adenine dinucleotide binding
JNX02_RS03840	COG4974	Belongs to the 'phage' integrase family
JNX02_RS03855	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JNX02_RS03860	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
JNX02_RS03865	COG0840	transmembrane signaling receptor activity
JNX02_RS03870	COG0629	single-stranded DNA binding
JNX02_RS03875	COG1196	nuclear chromosome segregation
JNX02_RS03875	COG0741	lytic transglycosylase activity
JNX02_RS03875	COG0739	heme binding
JNX02_RS03890	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNX02_RS03895	COG0601	transmembrane transport
JNX02_RS03905	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
JNX02_RS03910	COG0528	UMP kinase activity
JNX02_RS03915	COG0233	cytoplasmic translational termination
JNX02_RS03920	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
JNX02_RS03930	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
JNX02_RS03935	COG0750	zinc metalloprotease
JNX02_RS03945	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JNX02_RS03955	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JNX02_RS03960	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JNX02_RS03965	COG3494	Protein of unknown function (DUF1009)
JNX02_RS03970	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JNX02_RS03975	COG0482	sulfurtransferase activity
JNX02_RS03985	COG0745	RESPONSE REGULATOR receiver
JNX02_RS03990	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JNX02_RS03995	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JNX02_RS04000	COG0840	transmembrane signaling receptor activity
JNX02_RS04010	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
JNX02_RS04015	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JNX02_RS04025	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
JNX02_RS04030	COG1024	Enoyl-CoA hydratase
JNX02_RS04045	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JNX02_RS04050	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
JNX02_RS04060	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JNX02_RS04065	COG1309	transcriptional regulator
JNX02_RS04070	COG2326	polyphosphate kinase activity
JNX02_RS04075	COG0596	Alpha beta hydrolase
JNX02_RS04080	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
JNX02_RS04100	COG0519	Catalyzes the synthesis of GMP from XMP
JNX02_RS04100	COG0518	GMP synthase (glutamine-hydrolyzing) activity
JNX02_RS04105	COG5598	trimethylamine methyltransferase
JNX02_RS04125	COG1846	Transcriptional regulator
JNX02_RS04135	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
JNX02_RS04140	COG2010	Cytochrome c
JNX02_RS04155	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
JNX02_RS04160	COG2867	negative regulation of translational initiation
JNX02_RS04170	COG0004	ammonium transporteR
JNX02_RS04175	COG1058	Belongs to the CinA family
JNX02_RS04175	COG1546	Belongs to the CinA family
JNX02_RS04180	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
JNX02_RS04185	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
JNX02_RS04185	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
JNX02_RS04190	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JNX02_RS04195	COG3852	Histidine kinase
JNX02_RS04200	COG2204	response regulator
JNX02_RS04205	COG5000	phosphorelay sensor kinase activity
JNX02_RS04210	COG2204	response regulator
JNX02_RS04220	COG0569	domain protein
JNX02_RS04230	COG1923	regulation of RNA biosynthetic process
JNX02_RS04235	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JNX02_RS04250	COG2084	Dehydrogenase
JNX02_RS04255	COG0840	transmembrane signaling receptor activity
JNX02_RS04275	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JNX02_RS04310	COG4166	transmembrane transport
JNX02_RS04315	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS04330	COG2313	pseudouridylate synthase activity
JNX02_RS04350	COG0352	thiamine-phosphate diphosphorylase activity
JNX02_RS04360	COG1612	heme a metabolic process
JNX02_RS04365	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
JNX02_RS04370	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
JNX02_RS04375	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JNX02_RS04380	COG5425	PFAM Usg family protein
JNX02_RS04395	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JNX02_RS04405	COG0166	Belongs to the GPI family
JNX02_RS04415	COG0318	PFAM AMP-dependent synthetase and ligase
JNX02_RS04425	COG0789	Transcriptional regulator
JNX02_RS04455	COG0010	Belongs to the arginase family
JNX02_RS04460	COG0517	IMP dehydrogenase activity
JNX02_RS04460	COG0516	GMP reductase activity
JNX02_RS04480	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
JNX02_RS04485	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JNX02_RS04495	COG1217	gtp-binding protein TYPA
JNX02_RS04500	COG0668	transmembrane transport
JNX02_RS04510	COG1522	sequence-specific DNA binding
JNX02_RS04520	COG0121	glutamine amidotransferase
JNX02_RS04525	COG0538	isocitrate dehydrogenase activity
JNX02_RS04540	COG2945	thiolester hydrolase activity
JNX02_RS04545	COG1959	2 iron, 2 sulfur cluster binding
JNX02_RS04555	COG0719	Fe-S assembly protein
JNX02_RS04560	COG0393	Putative heavy-metal-binding
JNX02_RS04565	COG0396	ATPase activity
JNX02_RS04570	COG0719	Fe-S assembly protein
JNX02_RS04585	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JNX02_RS04635	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS04645	COG0385	Bile acid
JNX02_RS04650	COG2072	flavoprotein involved in K transport
JNX02_RS04675	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JNX02_RS04690	COG0583	DNA-binding transcription factor activity
JNX02_RS04695	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
JNX02_RS04705	COG0433	COG0433 Predicted ATPase
JNX02_RS04750	COG2133	pyrroloquinoline quinone binding
JNX02_RS04765	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
JNX02_RS04770	COG1522	sequence-specific DNA binding
JNX02_RS04790	COG1561	YicC-like family, N-terminal region
JNX02_RS04795	COG0194	GDP metabolic process
JNX02_RS04805	COG5002	protein histidine kinase activity
JNX02_RS04815	COG0573	inorganic phosphate transmembrane transporter activity
JNX02_RS04825	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JNX02_RS04835	COG0745	RESPONSE REGULATOR receiver
JNX02_RS04855	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
JNX02_RS04860	COG2197	response regulator
JNX02_RS04865	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JNX02_RS04870	COG0052	Belongs to the universal ribosomal protein uS2 family
JNX02_RS04900	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
JNX02_RS04905	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JNX02_RS04910	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
JNX02_RS04925	COG0211	Belongs to the bacterial ribosomal protein bL27 family
JNX02_RS04930	COG3743	rRNA binding
JNX02_RS04930	COG0261	This protein binds to 23S rRNA in the presence of protein L20
JNX02_RS04960	COG3639	organic phosphonate transmembrane transporter activity
JNX02_RS04965	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
JNX02_RS04980	COG0154	amidase activity
JNX02_RS04995	COG1396	sequence-specific DNA binding
JNX02_RS05000	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JNX02_RS05020	COG1181	Belongs to the D-alanine--D-alanine ligase family
JNX02_RS05030	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JNX02_RS05055	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
JNX02_RS05060	COG0248	Ppx GppA phosphatase
JNX02_RS05075	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
JNX02_RS05095	COG0784	Response regulator, receiver
JNX02_RS05095	COG2198	Histidine kinase
JNX02_RS05095	COG0643	Histidine kinase
JNX02_RS05105	COG0835	chemotaxis
JNX02_RS05110	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
JNX02_RS05115	COG0745	RESPONSE REGULATOR receiver
JNX02_RS05130	COG2201	protein-glutamate methylesterase activity
JNX02_RS05185	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JNX02_RS05190	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
JNX02_RS05190	COG3264	Mechanosensitive ion channel
JNX02_RS05200	COG0494	nUDIX hydrolase
JNX02_RS05210	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JNX02_RS05215	COG0415	Belongs to the DNA photolyase family
JNX02_RS05220	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JNX02_RS05225	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JNX02_RS05230	COG0537	adenosine 5'-monophosphoramidase activity
JNX02_RS05240	COG0604	alcohol dehydrogenase
JNX02_RS05245	COG0404	The glycine cleavage system catalyzes the degradation of glycine
JNX02_RS05260	COG0840	transmembrane signaling receptor activity
JNX02_RS05355	COG1473	amidohydrolase
JNX02_RS05365	COG2059	Chromate
JNX02_RS05375	COG0114	fumarate hydratase activity
JNX02_RS05395	COG3588	fructose-bisphosphate aldolase
JNX02_RS05400	COG2124	cytochrome p450
JNX02_RS05410	COG0785	Cytochrome C biogenesis protein
JNX02_RS05415	COG0425	Belongs to the sulfur carrier protein TusA family
JNX02_RS05430	COG1530	ribonuclease E activity
JNX02_RS05450	COG0047	phosphoribosylformylglycinamidine synthase activity
JNX02_RS05460	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JNX02_RS05465	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
JNX02_RS05485	COG5012	cobalamin binding
JNX02_RS05510	COG2166	iron-sulfur cluster assembly
JNX02_RS05520	COG0251	oxidation-reduction process
JNX02_RS05525	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
JNX02_RS05530	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JNX02_RS05535	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
JNX02_RS05595	COG0105	UTP biosynthetic process
JNX02_RS05600	COG0488	(ABC) transporter
JNX02_RS05605	COG2095	MarC family integral membrane protein
JNX02_RS05610	COG3577	Aspartyl protease
JNX02_RS05620	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
JNX02_RS05635	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
JNX02_RS05645	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
JNX02_RS05650	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
JNX02_RS05660	COG2890	protein-(glutamine-N5) methyltransferase activity
JNX02_RS05665	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JNX02_RS05685	COG0010	Belongs to the arginase family
JNX02_RS05690	COG1473	amidohydrolase
JNX02_RS05695	COG3956	TIGRFAM MazG family protein
JNX02_RS05710	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
JNX02_RS05725	COG0513	Belongs to the DEAD box helicase family
JNX02_RS05745	COG0148	phosphopyruvate hydratase activity
JNX02_RS05755	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
JNX02_RS05760	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JNX02_RS05775	COG0488	(ABC) transporter
JNX02_RS05795	COG0333	Belongs to the bacterial ribosomal protein bL32 family
JNX02_RS05800	COG0416	fatty acid biosynthetic process
JNX02_RS05805	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JNX02_RS05810	COG0776	regulation of translation
JNX02_RS05825	COG0717	Belongs to the dCTP deaminase family
JNX02_RS05835	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JNX02_RS05840	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JNX02_RS05845	COG1472	Belongs to the glycosyl hydrolase 3 family
JNX02_RS05855	COG0018	arginyl-trna synthetase
JNX02_RS05860	COG0232	Belongs to the dGTPase family. Type 2 subfamily
JNX02_RS05865	COG0316	Belongs to the HesB IscA family
JNX02_RS05905	COG2814	Major facilitator Superfamily
JNX02_RS05925	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JNX02_RS05930	COG0215	cysteine-tRNA ligase activity
JNX02_RS05950	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JNX02_RS05970	COG1278	Cold shock
JNX02_RS05975	COG0259	pyridoxamine-phosphate oxidase activity
JNX02_RS05980	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
JNX02_RS05990	COG1280	lysine exporter protein (LysE YggA)
JNX02_RS05995	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
JNX02_RS06010	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JNX02_RS06020	COG2226	methyltransferase
JNX02_RS06035	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JNX02_RS06040	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
JNX02_RS06045	COG0134	indole-3-glycerol-phosphate synthase activity
JNX02_RS06050	COG0315	cyclic pyranopterin monophosphate synthase activity
JNX02_RS06055	COG0303	'Molybdopterin
JNX02_RS06060	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JNX02_RS06065	COG2333	competence protein COMEC
JNX02_RS06065	COG0658	competence protein
JNX02_RS06070	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JNX02_RS06075	COG0372	Belongs to the citrate synthase family
JNX02_RS06085	COG1024	Enoyl-CoA hydratase
JNX02_RS06090	COG3088	subunit of a heme lyase
JNX02_RS06095	COG1138	Cytochrome C-type biogenesis protein
JNX02_RS06110	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
JNX02_RS06115	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
JNX02_RS06120	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
JNX02_RS06145	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JNX02_RS06190	COG0418	dihydroorotase activity
JNX02_RS06195	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JNX02_RS06200	COG0305	Participates in initiation and elongation during chromosome replication
JNX02_RS06215	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JNX02_RS06235	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JNX02_RS06240	COG3811	Belongs to the UPF0386 family
JNX02_RS06260	COG0300	oxidoreductase activity
JNX02_RS06265	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
JNX02_RS06270	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
JNX02_RS06285	COG0805	protein transport
JNX02_RS06290	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JNX02_RS06295	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JNX02_RS06320	COG3842	ATPase activity
JNX02_RS06330	COG4335	DNA alkylation repair
JNX02_RS06335	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS06350	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
JNX02_RS06360	COG0513	Belongs to the DEAD box helicase family
JNX02_RS06370	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
JNX02_RS06380	COG1007	ATP synthesis coupled electron transport
JNX02_RS06395	COG0713	ATP synthesis coupled electron transport
JNX02_RS06410	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JNX02_RS06415	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
JNX02_RS06460	COG3743	rRNA binding
JNX02_RS06460	COG0261	This protein binds to 23S rRNA in the presence of protein L20
JNX02_RS06470	COG0649	NAD binding
JNX02_RS06480	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JNX02_RS06485	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JNX02_RS06495	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
JNX02_RS06515	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JNX02_RS06520	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JNX02_RS06535	COG1960	acyl-CoA dehydrogenase activity
JNX02_RS06545	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JNX02_RS06550	COG0546	phosphoglycolate phosphatase activity
JNX02_RS06555	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JNX02_RS06580	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
JNX02_RS06585	COG1519	Transferase
JNX02_RS06590	COG0438	transferase activity, transferring glycosyl groups
JNX02_RS06595	COG1473	amidohydrolase
JNX02_RS06600	COG1473	amidohydrolase
JNX02_RS06605	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JNX02_RS06610	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JNX02_RS06620	COG4172	Belongs to the ABC transporter superfamily
JNX02_RS06630	COG0601	transmembrane transport
JNX02_RS06635	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNX02_RS06655	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
JNX02_RS06670	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
JNX02_RS06680	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
JNX02_RS06690	COG0308	aminopeptidase N
JNX02_RS06695	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS06715	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JNX02_RS06735	COG1959	2 iron, 2 sulfur cluster binding
JNX02_RS06750	COG0484	heat shock protein binding
JNX02_RS06785	COG0038	chloride channel
JNX02_RS06790	COG0497	DNA recombination
JNX02_RS06795	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JNX02_RS06805	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JNX02_RS06810	COG0849	cell division
JNX02_RS06815	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
JNX02_RS06820	COG1181	Belongs to the D-alanine--D-alanine ligase family
JNX02_RS06825	COG0812	UDP-N-acetylmuramate dehydrogenase activity
JNX02_RS06845	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
JNX02_RS06850	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JNX02_RS06865	COG2081	HI0933 family
JNX02_RS06870	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JNX02_RS06875	COG2066	Belongs to the glutaminase family
JNX02_RS06880	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JNX02_RS06890	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JNX02_RS06905	COG0275	rRNA processing
JNX02_RS06910	COG2001	Belongs to the MraZ family
JNX02_RS06920	COG0489	protein tyrosine kinase activity
JNX02_RS06945	COG0210	DNA helicase
JNX02_RS06955	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
JNX02_RS06965	COG0346	lactoylglutathione lyase activity
JNX02_RS06980	COG2226	methyltransferase
JNX02_RS06985	COG1610	YqeY-like protein
JNX02_RS06990	COG0505	Belongs to the CarA family
JNX02_RS07000	COG1802	Transcriptional regulator
JNX02_RS07035	COG1522	sequence-specific DNA binding
JNX02_RS07045	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
JNX02_RS07065	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JNX02_RS07070	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JNX02_RS07075	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JNX02_RS07085	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JNX02_RS07085	COG0574	Belongs to the PEP-utilizing enzyme family
JNX02_RS07100	COG0751	glycine-tRNA ligase activity
JNX02_RS07115	COG0752	glycyl-tRNA synthetase alpha subunit
JNX02_RS07130	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JNX02_RS07145	COG1469	GTP cyclohydrolase I activity
JNX02_RS07155	COG0625	glutathione transferase activity
JNX02_RS07170	COG0552	protein localization to endoplasmic reticulum
JNX02_RS07180	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
JNX02_RS07185	COG3239	Fatty acid desaturase
JNX02_RS07195	COG1570	exodeoxyribonuclease VII activity
JNX02_RS07200	COG0151	Belongs to the GarS family
JNX02_RS07230	COG0330	HflC and HflK could
JNX02_RS07235	COG0330	HflC and HflK could
JNX02_RS07245	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
JNX02_RS07255	COG1760	l-serine dehydratase
JNX02_RS07260	COG2084	Dehydrogenase
JNX02_RS07280	COG0346	lactoylglutathione lyase activity
JNX02_RS07285	COG1741	Belongs to the pirin family
JNX02_RS07310	COG2267	carboxylic ester hydrolase activity
JNX02_RS07335	COG1609	Transcriptional regulator
JNX02_RS07340	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS07350	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JNX02_RS07360	COG0395	ABC-type sugar transport system, permease component
JNX02_RS07375	COG3842	ATPase activity
JNX02_RS07395	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JNX02_RS07430	COG1215	transferase activity, transferring glycosyl groups
JNX02_RS07445	COG2977	Belongs to the P-Pant transferase superfamily
JNX02_RS07450	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JNX02_RS07450	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JNX02_RS07495	COG1012	belongs to the aldehyde dehydrogenase family
JNX02_RS07510	COG3447	MASE1 domain protein
JNX02_RS07510	COG5001	Diguanylate cyclase
JNX02_RS07510	COG5002	protein histidine kinase activity
JNX02_RS07565	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
JNX02_RS07600	COG0504	CTP synthase activity
JNX02_RS07615	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
JNX02_RS07645	COG4215	(ABC) transporter
JNX02_RS07650	COG4160	amino acid transport
JNX02_RS07655	COG0174	glutamine synthetase
JNX02_RS07660	COG0519	Catalyzes the synthesis of GMP from XMP
JNX02_RS07665	COG0174	glutamine synthetase
JNX02_RS07670	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JNX02_RS07675	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JNX02_RS07690	COG3243	poly(R)-hydroxyalkanoic acid synthase
JNX02_RS07740	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JNX02_RS07750	COG3220	belongs to the UPF0276 family
JNX02_RS07765	COG1393	Belongs to the ArsC family
JNX02_RS07770	COG1278	Cold shock
JNX02_RS07785	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
JNX02_RS07815	COG1846	Transcriptional regulator
JNX02_RS07845	COG2378	regulation of single-species biofilm formation
JNX02_RS07850	COG0534	Mate efflux family protein
JNX02_RS07865	COG0596	Alpha beta hydrolase
JNX02_RS07885	COG0187	DNA topoisomerase II activity
JNX02_RS07915	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
JNX02_RS07920	COG1136	(ABC) transporter
JNX02_RS07935	COG0442	prolyl-tRNA aminoacylation
JNX02_RS07940	COG2195	Cleaves the N-terminal amino acid of tripeptides
JNX02_RS07960	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
JNX02_RS07965	COG0248	Ppx GppA phosphatase
JNX02_RS07980	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
JNX02_RS07995	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
JNX02_RS07995	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
JNX02_RS08015	COG4770	biotin carboxylase activity
JNX02_RS08045	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JNX02_RS08050	COG2814	Major facilitator Superfamily
JNX02_RS08055	COG1396	sequence-specific DNA binding
JNX02_RS08055	COG3800	Transcriptional regulator
JNX02_RS08075	COG3119	arylsulfatase activity
JNX02_RS08080	COG1309	transcriptional regulator
JNX02_RS08110	COG0217	transcriptional regulatory protein
JNX02_RS08115	COG0471	metal ion transport
JNX02_RS08115	COG0490	domain, Protein
JNX02_RS08125	COG3273	potassium ion transport
JNX02_RS08125	COG0471	metal ion transport
JNX02_RS08130	COG1692	metallophosphoesterase
JNX02_RS08135	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JNX02_RS08140	COG2239	Acts as a magnesium transporter
JNX02_RS08145	COG0402	S-adenosylhomocysteine deaminase activity
JNX02_RS08160	COG0483	inositol monophosphate 1-phosphatase activity
JNX02_RS08165	COG1396	sequence-specific DNA binding
JNX02_RS08170	COG0583	DNA-binding transcription factor activity
JNX02_RS08180	COG0670	Belongs to the BI1 family
JNX02_RS08185	COG3813	Protein conserved in bacteria
JNX02_RS08195	COG0267	Belongs to the bacterial ribosomal protein bL33 family
JNX02_RS08200	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS08210	COG3023	N-Acetylmuramoyl-L-alanine amidase
JNX02_RS08220	COG0154	amidase activity
JNX02_RS08225	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JNX02_RS08230	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
JNX02_RS08245	COG0590	tRNA wobble adenosine to inosine editing
JNX02_RS08270	COG3853	Toxic anion resistance protein (TelA)
JNX02_RS08295	COG0778	Nitroreductase
JNX02_RS08300	COG1490	D-aminoacyl-tRNA deacylase activity
JNX02_RS08325	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNX02_RS08330	COG4172	Belongs to the ABC transporter superfamily
JNX02_RS08355	COG0657	acetylesterase activity
JNX02_RS08360	COG0318	PFAM AMP-dependent synthetase and ligase
JNX02_RS08365	COG1652	LysM domain
JNX02_RS08370	COG1132	(ABC) transporter
JNX02_RS08380	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JNX02_RS08415	COG1335	isochorismatase
JNX02_RS08430	COG0589	response to stress
JNX02_RS08435	COG1063	alcohol dehydrogenase
JNX02_RS08440	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS08445	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JNX02_RS08455	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
JNX02_RS08460	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
JNX02_RS08470	COG1414	Transcriptional regulator
JNX02_RS08480	COG0657	acetylesterase activity
JNX02_RS08485	COG2186	Transcriptional regulator
JNX02_RS08500	COG0395	ABC-type sugar transport system, permease component
JNX02_RS08505	COG1175	transmembrane transport
JNX02_RS08510	COG3842	ATPase activity
JNX02_RS08550	COG3239	Fatty acid desaturase
JNX02_RS08560	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JNX02_RS08570	COG2358	TRAP transporter, solute receptor (TAXI family
JNX02_RS08580	COG0589	response to stress
JNX02_RS08585	COG0583	DNA-binding transcription factor activity
JNX02_RS08590	COG4608	Belongs to the ABC transporter superfamily
JNX02_RS08600	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNX02_RS08605	COG0601	transmembrane transport
JNX02_RS08625	COG0457	Tetratricopeptide repeat
JNX02_RS08635	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS08640	COG3386	PFAM SMP-30 Gluconolaconase
JNX02_RS08645	COG0134	indole-3-glycerol-phosphate synthase activity
JNX02_RS08650	COG1250	3-hydroxyacyl-CoA dehydrogenase
JNX02_RS08660	COG3842	ATPase activity
JNX02_RS08665	COG1175	transmembrane transport
JNX02_RS08670	COG0395	ABC-type sugar transport system, permease component
JNX02_RS08685	COG0673	inositol 2-dehydrogenase activity
JNX02_RS08695	COG1609	Transcriptional regulator
JNX02_RS08705	COG1022	Amp-dependent synthetase and ligase
JNX02_RS08755	COG2197	response regulator
JNX02_RS08825	COG0582	viral genome integration into host DNA
JNX02_RS08835	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
JNX02_RS08840	COG1530	ribonuclease E activity
JNX02_RS08845	COG0424	maF-like protein
JNX02_RS08850	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
JNX02_RS08855	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JNX02_RS08860	COG0583	DNA-binding transcription factor activity
JNX02_RS08865	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JNX02_RS08880	COG0227	Belongs to the bacterial ribosomal protein bL28 family
JNX02_RS08885	COG1183	phosphatidylcholine synthase activity
JNX02_RS08890	COG2814	Major facilitator Superfamily
JNX02_RS08900	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JNX02_RS08905	COG3768	UPF0283 membrane protein
JNX02_RS08915	COG3106	COG3106 Predicted ATPase
JNX02_RS08920	COG0101	tRNA pseudouridine synthase activity
JNX02_RS08925	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
JNX02_RS08940	COG0306	phosphate transporter
JNX02_RS08955	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JNX02_RS08975	COG1804	L-carnitine dehydratase bile acid-inducible protein F
JNX02_RS08990	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
JNX02_RS08995	COG2943	transferase activity, transferring hexosyl groups
JNX02_RS09015	COG1573	uracil-dna glycosylase
JNX02_RS09045	COG2877	3-deoxy-8-phosphooctulonate synthase activity
JNX02_RS09050	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JNX02_RS09055	COG0135	phosphoribosylanthranilate isomerase activity
JNX02_RS09065	COG0776	regulation of translation
JNX02_RS09070	COG0539	negative regulation of cytoplasmic translation
JNX02_RS09075	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
JNX02_RS09085	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
JNX02_RS09090	COG0220	tRNA (guanine-N7-)-methyltransferase activity
JNX02_RS09100	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
JNX02_RS09105	COG0815	Transfers the fatty acyl group on membrane lipoproteins
JNX02_RS09110	COG1253	flavin adenine dinucleotide binding
JNX02_RS09115	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JNX02_RS09120	COG1702	phosphate starvation-inducible protein PhoH
JNX02_RS09135	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JNX02_RS09150	COG0583	DNA-binding transcription factor activity
JNX02_RS09160	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JNX02_RS09165	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JNX02_RS09170	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
JNX02_RS09175	COG0662	Cupin 2, conserved barrel domain protein
JNX02_RS09190	COG1047	Peptidyl-prolyl cis-trans
JNX02_RS09215	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
JNX02_RS09220	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JNX02_RS09240	COG4948	Mandelate Racemase Muconate Lactonizing
JNX02_RS09245	COG0022	dehydrogenase e1 component
JNX02_RS09250	COG1960	acyl-CoA dehydrogenase activity
JNX02_RS09255	COG0583	DNA-binding transcription factor activity
JNX02_RS09265	COG2135	peptidase activity
JNX02_RS09275	COG4977	sequence-specific DNA binding
JNX02_RS09275	COG1917	Cupin 2, conserved barrel domain protein
JNX02_RS09290	COG0737	Belongs to the 5'-nucleotidase family
JNX02_RS09305	COG0167	dihydroorotate dehydrogenase activity
JNX02_RS09315	COG0534	Mate efflux family protein
JNX02_RS09340	COG2197	response regulator
JNX02_RS09345	COG0789	Transcriptional regulator
JNX02_RS09350	COG1960	acyl-CoA dehydrogenase activity
JNX02_RS09365	COG1960	acyl-CoA dehydrogenase activity
JNX02_RS09370	COG0625	glutathione transferase activity
JNX02_RS09375	COG0183	Belongs to the thiolase family
JNX02_RS09385	COG0402	S-adenosylhomocysteine deaminase activity
JNX02_RS09410	COG0318	PFAM AMP-dependent synthetase and ligase
JNX02_RS09430	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
JNX02_RS09435	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
JNX02_RS09450	COG0280	phosphate acetyltransferase
JNX02_RS09450	COG0281	malic enzyme
JNX02_RS09460	COG3237	CsbD-like
JNX02_RS09465	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JNX02_RS09470	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
JNX02_RS09480	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS09495	COG3739	integral membrane protein
JNX02_RS09505	COG0596	Alpha beta hydrolase
JNX02_RS09510	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
JNX02_RS09530	COG1435	thymidine kinase activity
JNX02_RS09540	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JNX02_RS09545	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JNX02_RS09565	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JNX02_RS09575	COG1496	oxidoreductase activity
JNX02_RS09590	COG1522	sequence-specific DNA binding
JNX02_RS09595	COG0492	ferredoxin-NADP+ reductase activity
JNX02_RS09600	COG2046	Belongs to the sulfate adenylyltransferase family
JNX02_RS09600	COG0529	Catalyzes the synthesis of activated sulfate
JNX02_RS09610	COG0071	Belongs to the small heat shock protein (HSP20) family
JNX02_RS09625	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JNX02_RS09630	COG3454	Phosphonate metabolism
JNX02_RS09655	COG2205	protein histidine kinase activity
JNX02_RS09665	COG4251	negative regulation of phosphorylation
JNX02_RS09670	COG2201	protein-glutamate methylesterase activity
JNX02_RS09675	COG0459	protein refolding
JNX02_RS09680	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
JNX02_RS09695	COG1227	inorganic diphosphatase activity
JNX02_RS09710	COG2030	dehydratase
JNX02_RS09715	COG0196	riboflavin kinase activity
JNX02_RS09720	COG2983	Belongs to the UPF0260 family
JNX02_RS09750	COG0355	proton-transporting ATP synthase activity, rotational mechanism
JNX02_RS09755	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JNX02_RS09760	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
JNX02_RS09765	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
JNX02_RS09770	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JNX02_RS09785	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JNX02_RS09810	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
JNX02_RS09825	COG0287	Prephenate dehydrogenase
JNX02_RS09830	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JNX02_RS09835	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
JNX02_RS09845	COG2818	Glycosylase
JNX02_RS09860	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS09865	COG0583	DNA-binding transcription factor activity
JNX02_RS09890	COG0142	geranyltranstransferase activity
JNX02_RS09895	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
JNX02_RS09910	COG0789	Transcriptional regulator
JNX02_RS09920	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JNX02_RS09935	COG0303	'Molybdopterin
JNX02_RS09940	COG1763	Mo-molybdopterin cofactor biosynthetic process
JNX02_RS09945	COG0746	molybdenum cofactor guanylyltransferase activity
JNX02_RS09950	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
JNX02_RS09985	COG1960	acyl-CoA dehydrogenase activity
JNX02_RS09990	COG0009	L-threonylcarbamoyladenylate synthase
JNX02_RS09995	COG1678	Uncharacterized ACR, COG1678
JNX02_RS10005	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JNX02_RS10015	COG0521	Mo-molybdopterin cofactor biosynthetic process
JNX02_RS10020	COG1280	lysine exporter protein (LysE YggA)
JNX02_RS10025	COG1573	uracil-dna glycosylase
JNX02_RS10030	COG0540	Belongs to the ATCase OTCase family
JNX02_RS10050	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
JNX02_RS10060	COG1280	lysine exporter protein (LysE YggA)
JNX02_RS10080	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JNX02_RS10085	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
JNX02_RS10100	COG3011	Protein conserved in bacteria
JNX02_RS10105	COG0589	response to stress
JNX02_RS10110	COG0314	molybdopterin synthase activity
JNX02_RS10120	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JNX02_RS10125	COG0322	excinuclease ABC activity
JNX02_RS10130	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS10140	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
JNX02_RS10140	COG0616	signal peptide processing
JNX02_RS10145	COG0842	Transport permease protein
JNX02_RS10150	COG1131	(ABC) transporter
JNX02_RS10165	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS10165	COG0604	alcohol dehydrogenase
JNX02_RS10165	COG3321	synthase
JNX02_RS10170	COG2111	Na H antiporter
JNX02_RS10170	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JNX02_RS10175	COG1006	Multisubunit Na H antiporter MnhC subunit
JNX02_RS10180	COG0651	ATP synthesis coupled electron transport
JNX02_RS10185	COG1863	multisubunit Na H antiporter MnhE subunit
JNX02_RS10190	COG2212	antiporter activity
JNX02_RS10195	COG1320	monovalent cation:proton antiporter activity
JNX02_RS10205	COG1177	transmembrane transport
JNX02_RS10210	COG1176	ABC-type spermidine putrescine transport system, permease component I
JNX02_RS10215	COG3842	ATPase activity
JNX02_RS10230	COG1618	nucleotide phosphatase activity, acting on free nucleotides
JNX02_RS10230	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
JNX02_RS10235	COG0303	'Molybdopterin
JNX02_RS10250	COG2181	nitrate reductase activity
JNX02_RS10255	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
JNX02_RS10260	COG1140	nitrate reductase beta subunit
JNX02_RS10265	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JNX02_RS10270	COG2223	nitrite transmembrane transporter activity
JNX02_RS10275	COG2223	nitrite transmembrane transporter activity
JNX02_RS10290	COG3852	Histidine kinase
JNX02_RS10295	COG2204	response regulator
JNX02_RS10310	COG2864	formate dehydrogenase
JNX02_RS10315	COG0437	4 iron, 4 sulfur cluster binding
JNX02_RS10320	COG0243	molybdopterin cofactor binding
JNX02_RS10320	COG3383	formate dehydrogenase (NAD+) activity
JNX02_RS10360	COG0489	protein tyrosine kinase activity
JNX02_RS10410	COG4638	Rieske (2fe-2S)
JNX02_RS10415	COG1070	Carbohydrate kinase
JNX02_RS10435	COG3852	Histidine kinase
JNX02_RS10440	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JNX02_RS10450	COG0230	Belongs to the bacterial ribosomal protein bL34 family
JNX02_RS10455	COG0594	ribonuclease P activity
JNX02_RS10460	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
JNX02_RS10465	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JNX02_RS10470	COG0037	tRNA processing
JNX02_RS10475	COG5001	Diguanylate cyclase
JNX02_RS10480	COG0706	membrane insertase activity
JNX02_RS10490	COG0218	Necessary for normal cell division and for the maintenance of normal septation
JNX02_RS10495	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
JNX02_RS10505	COG2062	phosphohistidine phosphatase, SixA
JNX02_RS10510	COG1126	abc transporter atp-binding protein
JNX02_RS10515	COG0765	amino acid transport
JNX02_RS10520	COG4597	amino acid ABC transporter
JNX02_RS10525	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JNX02_RS10535	COG0546	phosphoglycolate phosphatase activity
JNX02_RS10545	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JNX02_RS10550	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JNX02_RS10555	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JNX02_RS10560	COG0203	ribosomal protein L17
JNX02_RS10565	COG0202	RNA polymerase activity
JNX02_RS10570	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
JNX02_RS10575	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
JNX02_RS10580	COG0563	adenylate kinase activity
JNX02_RS10585	COG0201	protein transport
JNX02_RS10590	COG0200	Binds to the 23S rRNA
JNX02_RS10600	COG1841	ribosomal large subunit assembly
JNX02_RS10605	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
JNX02_RS10610	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
JNX02_RS10615	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
JNX02_RS10620	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JNX02_RS10625	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JNX02_RS10630	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
JNX02_RS10635	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
JNX02_RS10640	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
JNX02_RS10645	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
JNX02_RS10650	COG0255	Belongs to the universal ribosomal protein uL29 family
JNX02_RS10670	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JNX02_RS10675	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
JNX02_RS10680	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
JNX02_RS10685	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
JNX02_RS10690	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
JNX02_RS10700	COG0089	rRNA binding
JNX02_RS10705	COG0088	Forms part of the polypeptide exit tunnel
JNX02_RS10710	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
JNX02_RS10715	COG0051	transcription antitermination factor activity, RNA binding
JNX02_RS10720	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JNX02_RS10730	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JNX02_RS10735	COG0049	tRNA binding
JNX02_RS10740	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
JNX02_RS10765	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JNX02_RS10770	COG0085	RNA polymerase activity
JNX02_RS10775	COG0222	ribosome binding
JNX02_RS10780	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
JNX02_RS10790	COG0081	regulation of translation
JNX02_RS10795	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
JNX02_RS10800	COG0250	Participates in transcription elongation, termination and antitermination
JNX02_RS10845	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JNX02_RS10855	COG2124	cytochrome p450
JNX02_RS10855	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JNX02_RS10860	COG0501	Belongs to the peptidase M48B family
JNX02_RS10870	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JNX02_RS10880	COG0300	oxidoreductase activity
JNX02_RS10890	COG2096	Adenosyltransferase
JNX02_RS10915	COG1250	3-hydroxyacyl-CoA dehydrogenase
JNX02_RS10925	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JNX02_RS10935	COG1660	Displays ATPase and GTPase activities
JNX02_RS10945	COG2205	protein histidine kinase activity
JNX02_RS10950	COG0745	RESPONSE REGULATOR receiver
JNX02_RS10955	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
JNX02_RS10970	COG1396	sequence-specific DNA binding
JNX02_RS11000	COG1381	Involved in DNA repair and RecF pathway recombination
JNX02_RS11010	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JNX02_RS11015	COG0571	ribonuclease III activity
JNX02_RS11020	COG0681	Belongs to the peptidase S26 family
JNX02_RS11025	COG0736	holo-[acyl-carrier-protein] synthase activity
JNX02_RS11035	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
JNX02_RS11045	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JNX02_RS11050	COG1758	RNA polymerase activity
JNX02_RS11055	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JNX02_RS11070	COG0697	spore germination
JNX02_RS11075	COG1846	Transcriptional regulator
JNX02_RS11080	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
JNX02_RS11100	COG0328	RNA-DNA hybrid ribonuclease activity
JNX02_RS11105	COG2860	membrane
JNX02_RS11115	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
JNX02_RS11120	COG0242	peptide deformylase activity
JNX02_RS11125	COG0242	peptide deformylase activity
JNX02_RS11130	COG0242	peptide deformylase activity
JNX02_RS11135	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JNX02_RS11150	COG0435	Glutathione S-transferase
JNX02_RS11165	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
JNX02_RS11205	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JNX02_RS11210	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JNX02_RS11215	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JNX02_RS11220	COG0356	it plays a direct role in the translocation of protons across the membrane
JNX02_RS11230	COG0583	DNA-binding transcription factor activity
JNX02_RS11255	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JNX02_RS11275	COG0228	four-way junction DNA binding
JNX02_RS11280	COG0778	Nitroreductase
JNX02_RS11290	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JNX02_RS11300	COG0336	Belongs to the RNA methyltransferase TrmD family
JNX02_RS11310	COG2326	polyphosphate kinase activity
JNX02_RS11315	COG0335	large ribosomal subunit rRNA binding
JNX02_RS11320	COG0254	rRNA binding
JNX02_RS11325	COG0488	(ABC) transporter
JNX02_RS11330	COG3920	Histidine kinase
JNX02_RS11335	COG2151	metal-sulfur cluster biosynthetic enzyme
JNX02_RS11335	COG0489	protein tyrosine kinase activity
JNX02_RS11350	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
JNX02_RS11355	COG0179	Fumarylacetoacetate (FAA) hydrolase
JNX02_RS11365	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JNX02_RS11385	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JNX02_RS11420	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JNX02_RS11440	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JNX02_RS11460	COG2813	Specifically methylates the guanine in position
JNX02_RS11465	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
JNX02_RS11475	COG1686	Belongs to the peptidase S11 family
JNX02_RS11480	COG0583	DNA-binding transcription factor activity
JNX02_RS11490	COG1335	isochorismatase
JNX02_RS11505	COG4172	Belongs to the ABC transporter superfamily
JNX02_RS11510	COG4239	(ABC) transporter, permease
JNX02_RS11515	COG4174	ABC transporter (Permease)
JNX02_RS11520	COG4166	transmembrane transport
JNX02_RS11525	COG3474	cytochrome
JNX02_RS11545	COG2816	NAD+ diphosphatase activity
JNX02_RS11550	COG0737	Belongs to the 5'-nucleotidase family
JNX02_RS11565	COG1309	transcriptional regulator
JNX02_RS11570	COG2321	neutral zinc metallopeptidase
JNX02_RS11580	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JNX02_RS11590	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
JNX02_RS11595	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JNX02_RS11620	COG0604	alcohol dehydrogenase
JNX02_RS11620	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS11620	COG3321	synthase
JNX02_RS11630	COG0183	Belongs to the thiolase family
JNX02_RS11635	COG1268	BioY protein
JNX02_RS11640	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JNX02_RS11645	COG1122	ATPase activity
JNX02_RS11655	COG0828	Belongs to the bacterial ribosomal protein bS21 family
JNX02_RS11660	COG3920	Histidine kinase
JNX02_RS11665	COG1522	sequence-specific DNA binding
JNX02_RS11670	COG0686	Belongs to the AlaDH PNT family
JNX02_RS11685	COG1970	mechanosensitive ion channel activity
JNX02_RS11690	COG0625	glutathione transferase activity
JNX02_RS11700	COG0072	phenylalanine-tRNA ligase activity
JNX02_RS11700	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JNX02_RS11715	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JNX02_RS11720	COG1309	transcriptional regulator
JNX02_RS11730	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
JNX02_RS11735	COG0291	Belongs to the bacterial ribosomal protein bL35 family
JNX02_RS11750	COG0469	pyruvate kinase activity
JNX02_RS11785	COG4948	Mandelate Racemase Muconate Lactonizing
JNX02_RS11800	COG1522	sequence-specific DNA binding
JNX02_RS11810	COG0825	malonyl-CoA metabolic process
JNX02_RS11835	COG2076	Multidrug Resistance protein
JNX02_RS11865	COG0640	Transcriptional regulator
JNX02_RS11875	COG2423	ornithine cyclodeaminase activity
JNX02_RS11880	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
JNX02_RS11890	COG0587	DNA-directed DNA polymerase activity
JNX02_RS11915	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JNX02_RS11920	COG1116	anion transmembrane transporter activity
JNX02_RS11930	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JNX02_RS11940	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JNX02_RS11945	COG0028	Belongs to the TPP enzyme family
JNX02_RS11955	COG0243	molybdopterin cofactor binding
JNX02_RS11960	COG0437	4 iron, 4 sulfur cluster binding
JNX02_RS11975	COG1473	amidohydrolase
JNX02_RS11980	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JNX02_RS11985	COG0741	lytic transglycosylase activity
JNX02_RS11995	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JNX02_RS11995	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
JNX02_RS12005	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
JNX02_RS12020	COG2885	chlorophyll binding
JNX02_RS12030	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JNX02_RS12035	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JNX02_RS12050	COG1051	belongs to the nudix hydrolase family
JNX02_RS12060	COG0446	pyridine nucleotide-disulphide oxidoreductase
JNX02_RS12060	COG1902	pentaerythritol trinitrate reductase activity
JNX02_RS12070	COG0583	DNA-binding transcription factor activity
JNX02_RS12090	COG1058	Belongs to the CinA family
JNX02_RS12090	COG1546	Belongs to the CinA family
JNX02_RS12095	COG1489	DNA binding
JNX02_RS12100	COG0024	Methionine aminopeptidase
JNX02_RS12105	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JNX02_RS12110	COG0742	ribosomal rna small subunit methyltransferase
JNX02_RS12120	COG0678	peroxiredoxin activity
JNX02_RS12125	COG0668	transmembrane transport
JNX02_RS12130	COG2154	pterin-4-alpha-carbinolamine dehydratase
JNX02_RS12175	COG0004	ammonium transporteR
JNX02_RS12185	COG2897	thiosulfate sulfurtransferase activity
JNX02_RS12195	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
JNX02_RS12280	COG0247	lactate metabolic process
JNX02_RS12285	COG0277	FAD linked oxidase domain protein
JNX02_RS12290	COG0277	FAD linked oxidase domain protein
JNX02_RS12305	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
JNX02_RS12310	COG0799	negative regulation of ribosome biogenesis
JNX02_RS12315	COG3264	Mechanosensitive ion channel
JNX02_RS12315	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
JNX02_RS12320	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
JNX02_RS12325	COG0066	3-isopropylmalate dehydratase activity
JNX02_RS12340	COG0473	3-isopropylmalate dehydrogenase activity
JNX02_RS12355	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JNX02_RS12375	COG0395	ABC-type sugar transport system, permease component
JNX02_RS12380	COG1175	transmembrane transport
JNX02_RS12385	COG3842	ATPase activity
JNX02_RS12390	COG3842	ATPase activity
JNX02_RS12400	COG0583	DNA-binding transcription factor activity
JNX02_RS12440	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
JNX02_RS12460	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
JNX02_RS12460	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
JNX02_RS12470	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
JNX02_RS12475	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JNX02_RS12485	COG3214	Protein conserved in bacteria
JNX02_RS12490	COG1609	Transcriptional regulator
JNX02_RS12505	COG5598	trimethylamine methyltransferase
JNX02_RS12515	COG2010	Cytochrome c
JNX02_RS12515	COG1529	Aldehyde oxidase and xanthine dehydrogenase
JNX02_RS12525	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
JNX02_RS12535	COG1522	sequence-specific DNA binding
JNX02_RS12550	COG0028	Belongs to the TPP enzyme family
JNX02_RS12550	COG4032	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
JNX02_RS12560	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JNX02_RS12580	COG1012	belongs to the aldehyde dehydrogenase family
JNX02_RS12590	COG0318	PFAM AMP-dependent synthetase and ligase
JNX02_RS12605	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS12610	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JNX02_RS12620	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
JNX02_RS12625	COG1595	DNA-templated transcription, initiation
JNX02_RS12630	COG3806	Anti-sigma factor
JNX02_RS12640	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
JNX02_RS12645	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JNX02_RS12665	COG0625	glutathione transferase activity
JNX02_RS12670	COG2808	Putative FMN-binding domain
JNX02_RS12680	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
JNX02_RS12685	COG1178	ABC-type Fe3 transport system permease component
JNX02_RS12690	COG4143	(ABC) transporter
JNX02_RS12695	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
JNX02_RS12710	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS12715	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JNX02_RS12720	COG1846	Transcriptional regulator
JNX02_RS12725	COG0745	RESPONSE REGULATOR receiver
JNX02_RS12730	COG1722	exodeoxyribonuclease VII activity
JNX02_RS12735	COG0142	geranyltranstransferase activity
JNX02_RS12740	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JNX02_RS12760	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
JNX02_RS12795	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
JNX02_RS12800	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JNX02_RS12815	COG0697	spore germination
JNX02_RS12825	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JNX02_RS12830	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JNX02_RS12840	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JNX02_RS12850	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JNX02_RS12890	COG0582	viral genome integration into host DNA
JNX02_RS12905	COG1414	Transcriptional regulator
JNX02_RS12915	COG3396	Phenylacetate-CoA oxygenase
JNX02_RS12920	COG3460	Phenylacetate-CoA oxygenase
JNX02_RS12925	COG3396	Phenylacetate-CoA oxygenase
JNX02_RS12930	COG2151	metal-sulfur cluster biosynthetic enzyme
JNX02_RS12935	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JNX02_RS12940	COG2030	dehydratase
JNX02_RS12940	COG1012	belongs to the aldehyde dehydrogenase family
JNX02_RS12945	COG3327	negative regulation of DNA-templated transcription, initiation
JNX02_RS12950	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
JNX02_RS12955	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
JNX02_RS12955	COG0517	IMP dehydrogenase activity
JNX02_RS12970	COG1137	ATPase activity
JNX02_RS12975	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JNX02_RS12980	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JNX02_RS13005	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JNX02_RS13020	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
JNX02_RS13040	COG0443	Heat shock 70 kDa protein
JNX02_RS13045	COG0484	heat shock protein binding
JNX02_RS13055	COG2003	Belongs to the UPF0758 family
JNX02_RS13070	COG0653	protein targeting
JNX02_RS13075	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JNX02_RS13080	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
JNX02_RS13085	COG0494	nUDIX hydrolase
JNX02_RS13090	COG0346	lactoylglutathione lyase activity
JNX02_RS13095	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
JNX02_RS13110	COG0779	Required for maturation of 30S ribosomal subunits
JNX02_RS13125	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JNX02_RS13135	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JNX02_RS13175	COG3034	peptidoglycan biosynthetic process
JNX02_RS13185	COG1132	(ABC) transporter
JNX02_RS13190	COG1132	(ABC) transporter
JNX02_RS13195	COG0617	tRNA 3'-terminal CCA addition
JNX02_RS13200	COG0494	nUDIX hydrolase
JNX02_RS13210	COG0494	nUDIX hydrolase
JNX02_RS13215	COG0745	RESPONSE REGULATOR receiver
JNX02_RS13225	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS13230	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JNX02_RS13235	COG0137	argininosuccinate synthase activity
JNX02_RS13250	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JNX02_RS13255	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JNX02_RS13260	COG0281	malic enzyme
JNX02_RS13260	COG0280	phosphate acetyltransferase
JNX02_RS13270	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
JNX02_RS13275	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
JNX02_RS13280	COG1420	regulation of RNA biosynthetic process
JNX02_RS13285	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
JNX02_RS13290	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
JNX02_RS13295	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JNX02_RS13310	COG0357	Ribosomal RNA small subunit methyltransferase G
JNX02_RS13315	COG0445	tRNA wobble uridine modification
JNX02_RS13320	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
JNX02_RS13325	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
JNX02_RS13330	COG1981	membrane
JNX02_RS13335	COG0424	maF-like protein
JNX02_RS13340	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JNX02_RS13345	COG0237	dephospho-CoA kinase activity
JNX02_RS13350	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JNX02_RS13355	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
JNX02_RS13385	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
JNX02_RS13390	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
JNX02_RS13405	COG1074	ATP-dependent DNA helicase activity
JNX02_RS13415	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
JNX02_RS13420	COG3178	'Phosphotransferase
JNX02_RS13425	COG0802	atpase or kinase
JNX02_RS13440	COG1999	signal sequence binding
JNX02_RS13445	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
JNX02_RS13455	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
JNX02_RS13465	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
JNX02_RS13495	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
JNX02_RS13500	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
JNX02_RS13530	COG1960	acyl-CoA dehydrogenase activity
JNX02_RS13560	COG1216	Glycosyl transferase, family 2
JNX02_RS13560	COG0463	Glycosyl transferase, family 2
JNX02_RS13610	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
JNX02_RS13615	COG1088	dTDP-glucose 4,6-dehydratase activity
JNX02_RS13620	COG1091	dTDP-4-dehydrorhamnose reductase activity
JNX02_RS13635	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
JNX02_RS13635	COG0662	Cupin 2, conserved barrel domain protein
JNX02_RS13670	COG3191	aminopeptidase activity
JNX02_RS13685	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNX02_RS13715	COG0747	negative chemotaxis
JNX02_RS13730	COG2116	formate transmembrane transporter activity
JNX02_RS13735	COG1295	ribonuclease BN
JNX02_RS13745	COG0069	glutamate synthase activity
JNX02_RS13750	COG1804	L-carnitine dehydratase bile acid-inducible protein F
JNX02_RS13760	COG2995	paraquat-inducible protein a
JNX02_RS13765	COG3008	intermembrane lipid transfer
JNX02_RS13765	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
JNX02_RS13775	COG0786	glutamate:sodium symporter activity
JNX02_RS13785	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JNX02_RS13800	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JNX02_RS13810	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JNX02_RS13815	COG0268	Binds directly to 16S ribosomal RNA
JNX02_RS13820	COG1024	Enoyl-CoA hydratase
JNX02_RS13825	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
JNX02_RS13830	COG2226	methyltransferase
JNX02_RS13840	COG0183	Belongs to the thiolase family
JNX02_RS13845	COG1396	sequence-specific DNA binding
JNX02_RS13850	COG0156	8-amino-7-oxononanoate synthase activity
JNX02_RS13855	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JNX02_RS13860	COG1063	alcohol dehydrogenase
JNX02_RS13870	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
JNX02_RS13885	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JNX02_RS13890	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
JNX02_RS13895	COG0560	Phosphoserine phosphatase
JNX02_RS13925	COG0820	rRNA (adenine-C2-)-methyltransferase activity
JNX02_RS13945	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JNX02_RS13950	COG2171	N-acyltransferase activity
JNX02_RS13975	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JNX02_RS13985	COG0557	exoribonuclease II activity
JNX02_RS13995	COG2378	regulation of single-species biofilm formation
JNX02_RS14000	COG2951	lytic endotransglycosylase activity
JNX02_RS14010	COG1802	Transcriptional regulator
JNX02_RS14020	COG3842	ATPase activity
JNX02_RS14025	COG1176	ABC-type spermidine putrescine transport system, permease component I
JNX02_RS14030	COG1177	transmembrane transport
JNX02_RS14035	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JNX02_RS14040	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
JNX02_RS14060	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JNX02_RS14070	COG5443	negative regulation of bacterial-type flagellum assembly
JNX02_RS14090	COG1558	bacterial-type flagellum-dependent cell motility
JNX02_RS14095	COG1677	Flagellar hook-basal body complex protein FliE
JNX02_RS14100	COG1987	bacterial-type flagellum assembly
JNX02_RS14105	COG4786	Flagellar basal body rod
JNX02_RS14110	COG4786	Flagellar basal body rod
JNX02_RS14120	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
JNX02_RS14135	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JNX02_RS14145	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JNX02_RS14160	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
JNX02_RS14185	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JNX02_RS14190	COG1338	Plays a role in the flagellum-specific transport system
JNX02_RS14200	COG1706	bacterial-type flagellum-dependent cell motility
JNX02_RS14225	COG2271	Major facilitator Superfamily
JNX02_RS14230	COG1054	Belongs to the UPF0176 family
JNX02_RS14235	COG1335	isochorismatase
JNX02_RS14245	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JNX02_RS14305	COG2099	Precorrin-6x reductase
JNX02_RS14320	COG2875	Belongs to the precorrin methyltransferase family
JNX02_RS14325	COG1797	cobyrinic acid a,c-diamide synthase activity
JNX02_RS14330	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JNX02_RS14330	COG1648	precorrin-2 dehydrogenase activity
JNX02_RS14380	COG0514	ATP-dependent DNA helicase (RecQ)
JNX02_RS14385	COG3022	response to hydroperoxide
JNX02_RS14390	COG5002	protein histidine kinase activity
JNX02_RS14390	COG2205	protein histidine kinase activity
JNX02_RS14390	COG0784	Response regulator, receiver
JNX02_RS14395	COG2373	Large extracellular alpha-helical protein
JNX02_RS14400	COG4953	penicillin-binding protein 1C
JNX02_RS14440	COG0714	Associated with various cellular activities
JNX02_RS14450	COG3622	Belongs to the hyi family
JNX02_RS14465	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JNX02_RS14465	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JNX02_RS14475	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JNX02_RS14485	COG0793	Belongs to the peptidase S41A family
JNX02_RS14495	COG1595	DNA-templated transcription, initiation
JNX02_RS14515	COG0129	dihydroxy-acid dehydratase activity
JNX02_RS14520	COG1132	(ABC) transporter
JNX02_RS14530	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
JNX02_RS14535	COG0285	dihydrofolate synthase activity
JNX02_RS14545	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
JNX02_RS14555	COG2423	ornithine cyclodeaminase activity
JNX02_RS14565	COG1671	Belongs to the UPF0178 family
JNX02_RS14570	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
JNX02_RS14600	COG2050	protein possibly involved in aromatic compounds catabolism
JNX02_RS14610	COG0791	NLP P60 protein
JNX02_RS14615	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
JNX02_RS14625	COG0288	reversible hydration of carbon dioxide
JNX02_RS14645	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JNX02_RS14675	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JNX02_RS14700	COG1194	a g-specific adenine glycosylase
JNX02_RS14720	COG1663	tetraacyldisaccharide 4'-kinase activity
JNX02_RS14725	COG1519	Transferase
JNX02_RS14740	COG0312	modulator of DNA gyrase
JNX02_RS14750	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS14765	COG3264	Mechanosensitive ion channel
JNX02_RS14765	COG1196	nuclear chromosome segregation
JNX02_RS14770	COG2081	HI0933 family
JNX02_RS14790	COG0495	leucyl-tRNA aminoacylation
JNX02_RS14805	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JNX02_RS14820	COG0745	RESPONSE REGULATOR receiver
JNX02_RS14835	COG3118	belongs to the thioredoxin family
JNX02_RS14840	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
JNX02_RS14845	COG2835	tetraacyldisaccharide 4'-kinase activity
JNX02_RS14850	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JNX02_RS14855	COG0154	amidase activity
JNX02_RS14860	COG0436	Aminotransferase
JNX02_RS14865	COG1674	ftsk spoiiie
JNX02_RS14890	COG0405	Gamma-glutamyltransferase
JNX02_RS14900	COG1366	Belongs to the anti-sigma-factor antagonist family
JNX02_RS14955	COG0564	pseudouridine synthase activity
JNX02_RS14965	COG0450	alkyl hydroperoxide reductase
JNX02_RS14975	COG1185	polyribonucleotide nucleotidyltransferase activity
JNX02_RS14980	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
JNX02_RS14995	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JNX02_RS15000	COG3698	Phosphodiester glycosidase
JNX02_RS15005	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
JNX02_RS15010	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
JNX02_RS15040	COG0138	bifunctional purine biosynthesis protein purh
JNX02_RS15045	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
JNX02_RS15055	COG0612	Peptidase, M16
JNX02_RS15060	COG0612	Peptidase, M16
JNX02_RS15065	COG1012	belongs to the aldehyde dehydrogenase family
JNX02_RS15075	COG0803	Belongs to the bacterial solute-binding protein 9 family
JNX02_RS15080	COG1121	(ABC) transporter
JNX02_RS15085	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JNX02_RS15090	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JNX02_RS15095	COG2351	hydroxyisourate hydrolase activity
JNX02_RS15105	COG3257	ureidoglycine aminohydrolase activity
JNX02_RS15110	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
JNX02_RS15125	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
JNX02_RS15140	COG0625	glutathione transferase activity
JNX02_RS15150	COG3383	formate dehydrogenase (NAD+) activity
JNX02_RS15165	COG4191	Histidine kinase
JNX02_RS15180	COG0559	Belongs to the binding-protein-dependent transport system permease family
JNX02_RS15200	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
JNX02_RS15205	COG1178	ABC-type Fe3 transport system permease component
JNX02_RS15215	COG1840	ABC-type Fe3 transport system, periplasmic component
JNX02_RS15220	COG0625	glutathione transferase activity
JNX02_RS15225	COG0384	phenazine biosynthesis protein PhzF
JNX02_RS15230	COG0257	Belongs to the bacterial ribosomal protein bL36 family
JNX02_RS15250	COG1309	transcriptional regulator
JNX02_RS15255	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JNX02_RS15260	COG1051	belongs to the nudix hydrolase family
JNX02_RS15265	COG0284	orotidine-5'-phosphate decarboxylase activity
JNX02_RS15285	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JNX02_RS15290	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
JNX02_RS15300	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
JNX02_RS15345	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
JNX02_RS15375	COG0745	RESPONSE REGULATOR receiver
JNX02_RS15380	COG0346	lactoylglutathione lyase activity
JNX02_RS15395	COG0778	Nitroreductase
JNX02_RS15400	COG2514	catechol 2,3-dioxygenase activity
JNX02_RS15405	COG0180	Tryptophanyl-tRNA synthetase
JNX02_RS15425	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
JNX02_RS15435	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JNX02_RS15440	COG0792	nuclease activity
JNX02_RS15445	COG0189	ligase activity
JNX02_RS15450	COG0657	acetylesterase activity
JNX02_RS15455	COG0606	chelatase, subunit chli
JNX02_RS15480	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JNX02_RS15485	COG0756	dUTP diphosphatase activity
JNX02_RS15490	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JNX02_RS15495	COG0339	signal peptide processing
JNX02_RS15500	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JNX02_RS15510	COG0772	Belongs to the SEDS family
JNX02_RS15515	COG0768	penicillin binding
JNX02_RS15540	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JNX02_RS15550	COG3046	protein related to deoxyribodipyrimidine photolyase
JNX02_RS15605	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JNX02_RS15620	COG0404	The glycine cleavage system catalyzes the degradation of glycine
JNX02_RS15625	COG0509	glycine decarboxylation via glycine cleavage system
JNX02_RS15630	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
JNX02_RS15630	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
JNX02_RS15635	COG0483	inositol monophosphate 1-phosphatase activity
JNX02_RS15645	COG4181	ATPase activity
JNX02_RS15665	COG0493	'glutamate synthase
JNX02_RS15680	COG1309	transcriptional regulator
JNX02_RS15710	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JNX02_RS15715	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JNX02_RS15720	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JNX02_RS15730	COG1376	ErfK ybiS ycfS ynhG family protein
JNX02_RS15735	COG1278	Cold shock
JNX02_RS15745	COG0488	(ABC) transporter
JNX02_RS15755	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JNX02_RS15785	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
JNX02_RS15815	COG0556	nucleotide-excision repair
JNX02_RS15825	COG0454	-acetyltransferase
JNX02_RS15845	COG3842	ATPase activity
JNX02_RS15865	COG1177	transmembrane transport
JNX02_RS15880	COG2951	lytic endotransglycosylase activity
JNX02_RS15885	COG0745	RESPONSE REGULATOR receiver
JNX02_RS15890	COG4999	Histidine kinase
JNX02_RS15890	COG2205	protein histidine kinase activity
JNX02_RS15890	COG3437	response regulator, receiver
JNX02_RS15890	COG3850	Histidine kinase
JNX02_RS15910	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JNX02_RS15920	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JNX02_RS15925	COG5328	Belongs to the UPF0262 family
JNX02_RS15960	COG0481	GTPase activity
JNX02_RS15965	COG1943	Transposase
JNX02_RS15975	COG2824	Alkylphosphonate utilization operon protein PhnA
JNX02_RS15980	COG3246	L-lysine catabolic process to acetate
JNX02_RS16000	COG0588	phosphoglycerate mutase activity
JNX02_RS16005	COG0438	transferase activity, transferring glycosyl groups
JNX02_RS16020	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
JNX02_RS16025	COG0668	transmembrane transport
JNX02_RS16030	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
JNX02_RS16035	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNX02_RS16040	COG0601	transmembrane transport
JNX02_RS16045	COG0747	negative chemotaxis
JNX02_RS16065	COG1250	3-hydroxyacyl-CoA dehydrogenase
JNX02_RS16065	COG1024	Enoyl-CoA hydratase
JNX02_RS16070	COG0183	Belongs to the thiolase family
JNX02_RS16075	COG1960	acyl-CoA dehydrogenase activity
JNX02_RS16080	COG1960	acyl-CoA dehydrogenase activity
JNX02_RS16090	COG1024	Enoyl-CoA hydratase
JNX02_RS16095	COG0318	PFAM AMP-dependent synthetase and ligase
JNX02_RS16105	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JNX02_RS16125	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JNX02_RS16145	COG3119	arylsulfatase activity
JNX02_RS16150	COG2391	methyltransferase activity
JNX02_RS16165	COG0785	Cytochrome C biogenesis protein
JNX02_RS16190	COG3258	Cytochrome c
JNX02_RS16195	COG0737	Belongs to the 5'-nucleotidase family
JNX02_RS16215	COG0446	pyridine nucleotide-disulphide oxidoreductase
JNX02_RS16225	COG2391	methyltransferase activity
JNX02_RS16265	COG0436	Aminotransferase
JNX02_RS16270	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JNX02_RS16275	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS16295	COG0726	polysaccharide deacetylase
JNX02_RS16315	COG0174	glutamine synthetase
JNX02_RS16370	COG0800	Aldolase
JNX02_RS16375	COG3734	2-keto-3-deoxy-galactonokinase
JNX02_RS16380	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS16385	COG0129	dihydroxy-acid dehydratase activity
JNX02_RS16400	COG1175	transmembrane transport
JNX02_RS16425	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JNX02_RS16445	COG5487	UPF0391 membrane protein
JNX02_RS16450	COG0784	Response regulator, receiver
JNX02_RS16470	COG0628	permease
JNX02_RS16480	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JNX02_RS16485	COG1959	2 iron, 2 sulfur cluster binding
JNX02_RS16490	COG0840	transmembrane signaling receptor activity
JNX02_RS16505	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
JNX02_RS16515	COG2909	trisaccharide binding
JNX02_RS16520	COG2186	Transcriptional regulator
JNX02_RS16530	COG1172	Belongs to the binding-protein-dependent transport system permease family
JNX02_RS16540	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS16545	COG2017	converts alpha-aldose to the beta-anomer
JNX02_RS16550	COG3386	PFAM SMP-30 Gluconolaconase
JNX02_RS16560	COG0129	dihydroxy-acid dehydratase activity
JNX02_RS16565	COG0179	Fumarylacetoacetate (FAA) hydrolase
JNX02_RS16570	COG0148	phosphopyruvate hydratase activity
JNX02_RS16585	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
JNX02_RS16600	COG0747	negative chemotaxis
JNX02_RS16605	COG0601	transmembrane transport
JNX02_RS16610	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNX02_RS16615	COG0444	Belongs to the ABC transporter superfamily
JNX02_RS16620	COG4608	Belongs to the ABC transporter superfamily
JNX02_RS16630	COG0402	S-adenosylhomocysteine deaminase activity
JNX02_RS16640	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JNX02_RS16645	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS16665	COG0395	ABC-type sugar transport system, permease component
JNX02_RS16670	COG3842	ATPase activity
JNX02_RS16675	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JNX02_RS16680	COG1609	Transcriptional regulator
JNX02_RS16690	COG0154	amidase activity
JNX02_RS16700	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JNX02_RS16710	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JNX02_RS16715	COG0563	adenylate kinase activity
JNX02_RS16725	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JNX02_RS16740	COG2176	DNA-directed DNA polymerase activity
JNX02_RS16740	COG5002	protein histidine kinase activity
JNX02_RS16750	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JNX02_RS16760	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
JNX02_RS16765	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JNX02_RS16775	COG0765	amino acid transport
JNX02_RS16780	COG0765	amino acid transport
JNX02_RS16785	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JNX02_RS16815	COG2268	Band 7 protein
JNX02_RS16835	COG0411	ABC transporter
JNX02_RS16845	COG0318	PFAM AMP-dependent synthetase and ligase
JNX02_RS16850	COG1609	Transcriptional regulator
JNX02_RS16870	COG1959	2 iron, 2 sulfur cluster binding
JNX02_RS16875	COG0477	Major facilitator Superfamily
JNX02_RS16900	COG1172	Belongs to the binding-protein-dependent transport system permease family
JNX02_RS16905	COG1129	ABC transporter
JNX02_RS16910	COG1879	ABC-type sugar transport system periplasmic component
JNX02_RS16915	COG1082	Xylose isomerase domain protein TIM barrel
JNX02_RS16920	COG0673	inositol 2-dehydrogenase activity
JNX02_RS16925	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS16930	COG1609	Transcriptional regulator
JNX02_RS16935	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS16950	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
JNX02_RS16960	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JNX02_RS16975	COG0395	ABC-type sugar transport system, permease component
JNX02_RS16980	COG1175	transmembrane transport
JNX02_RS16990	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
JNX02_RS16995	COG2188	Transcriptional regulator
JNX02_RS17000	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
JNX02_RS17005	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JNX02_RS17015	COG2197	response regulator
JNX02_RS17035	COG0404	The glycine cleavage system catalyzes the degradation of glycine
JNX02_RS17080	COG0006	proline dipeptidase activity
JNX02_RS17085	COG4948	Mandelate Racemase Muconate Lactonizing
JNX02_RS17095	COG0583	DNA-binding transcription factor activity
JNX02_RS17125	COG0604	alcohol dehydrogenase
JNX02_RS17130	COG0596	Alpha beta hydrolase
JNX02_RS17145	COG0405	Gamma-glutamyltransferase
JNX02_RS17150	COG0277	FAD linked oxidase domain protein
JNX02_RS17155	COG3300	MHYT domain
JNX02_RS17155	COG5001	Diguanylate cyclase
JNX02_RS17180	COG0667	Aldo Keto reductase
JNX02_RS17190	COG1917	Cupin 2, conserved barrel domain protein
JNX02_RS17210	COG1079	Belongs to the binding-protein-dependent transport system permease family
JNX02_RS17215	COG4603	Belongs to the binding-protein-dependent transport system permease family
JNX02_RS17220	COG3845	ABC transporter
JNX02_RS17230	COG1529	Aldehyde oxidase and xanthine dehydrogenase
JNX02_RS17255	COG0124	histidyl-tRNA synthetase
JNX02_RS17260	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
JNX02_RS17265	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
JNX02_RS17295	COG3845	ABC transporter
JNX02_RS17300	COG4603	Belongs to the binding-protein-dependent transport system permease family
JNX02_RS17305	COG1079	Belongs to the binding-protein-dependent transport system permease family
JNX02_RS17310	COG0402	S-adenosylhomocysteine deaminase activity
JNX02_RS17335	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNX02_RS17340	COG0165	Argininosuccinate lyase
JNX02_RS17360	COG0019	diaminopimelate decarboxylase activity
JNX02_RS17375	COG2884	Cell division ATP-binding protein ftsE
JNX02_RS17415	COG0508	dehydrogenase complex catalyzes the overall conversion of
JNX02_RS17420	COG0567	Dehydrogenase, E1 component
JNX02_RS17425	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
JNX02_RS17440	COG0045	succinate-CoA ligase (ADP-forming) activity
JNX02_RS17450	COG2030	dehydratase
JNX02_RS17485	COG0039	L-malate dehydrogenase activity
JNX02_RS17535	COG0813	purine-nucleoside phosphorylase activity
JNX02_RS17545	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
JNX02_RS17545	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
JNX02_RS17555	COG0604	alcohol dehydrogenase
JNX02_RS17570	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JNX02_RS17575	COG4221	oxidoreductase activity
JNX02_RS17585	COG0730	response to heat
JNX02_RS17590	COG1079	Belongs to the binding-protein-dependent transport system permease family
JNX02_RS17595	COG4603	Belongs to the binding-protein-dependent transport system permease family
JNX02_RS17600	COG3845	ABC transporter
JNX02_RS17605	COG1744	ABC transporter substrate-binding protein PnrA-like
JNX02_RS17620	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
JNX02_RS17630	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JNX02_RS17655	COG1272	protein, Hemolysin III
JNX02_RS17670	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JNX02_RS17680	COG0133	tryptophan synthase activity
JNX02_RS17700	COG0193	aminoacyl-tRNA hydrolase activity
JNX02_RS17710	COG3795	YCII-related domain
JNX02_RS17720	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
JNX02_RS17735	COG1304	FMN binding
JNX02_RS17750	COG0159	tryptophan synthase activity
JNX02_RS17760	COG0012	GTP binding
JNX02_RS17775	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JNX02_RS17785	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JNX02_RS17810	COG1012	belongs to the aldehyde dehydrogenase family
JNX02_RS17815	COG5441	Belongs to the UPF0261 family
JNX02_RS17830	COG1012	belongs to the aldehyde dehydrogenase family
JNX02_RS17845	COG0179	Fumarylacetoacetate (FAA) hydrolase
JNX02_RS17850	COG3971	2-oxopent-4-enoate hydratase activity
JNX02_RS17885	COG3448	diguanylate cyclase activity
JNX02_RS17885	COG4175	Glycine betaine
JNX02_RS17890	COG4176	ABC-type proline glycine betaine transport system permease component
JNX02_RS17905	COG1609	Transcriptional regulator
JNX02_RS17925	COG3916	Acyl-homoserine-lactone synthase
JNX02_RS17965	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JNX02_RS17975	COG1192	Involved in chromosome partitioning
JNX02_RS17980	COG1475	DNA binding
JNX02_RS17985	COG1414	Transcriptional regulator
JNX02_RS18050	COG3077	Addiction module antitoxin, RelB DinJ family
JNX02_RS18100	COG4948	Mandelate Racemase Muconate Lactonizing
JNX02_RS18120	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JNX02_RS18125	COG1737	Transcriptional regulator
JNX02_RS18130	COG4974	Belongs to the 'phage' integrase family
JNX02_RS18135	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JNX02_RS18210	COG4962	Type ii secretion system protein e
JNX02_RS18235	COG1196	nuclear chromosome segregation
JNX02_RS18235	COG0739	heme binding
JNX02_RS18235	COG0741	lytic transglycosylase activity
JNX02_RS18260	COG1196	nuclear chromosome segregation
JNX02_RS18260	COG0741	lytic transglycosylase activity
JNX02_RS18260	COG0739	heme binding
JNX02_RS18320	COG1228	amidohydrolase
JNX02_RS18325	COG0523	cobalamin synthesis protein
JNX02_RS18345	COG1230	cation diffusion facilitator family transporter
JNX02_RS18360	COG0789	Transcriptional regulator
JNX02_RS18365	COG1999	signal sequence binding
JNX02_RS18385	COG1999	signal sequence binding
JNX02_RS18410	COG0815	Transfers the fatty acyl group on membrane lipoproteins
JNX02_RS18420	COG2366	antibiotic biosynthetic process
JNX02_RS18430	COG3034	peptidoglycan biosynthetic process
JNX02_RS18445	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
JNX02_RS18450	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JNX02_RS18505	COG1360	Flagellar Motor Protein
JNX02_RS18530	COG5442	Flagellar protein FlaF
JNX02_RS18535	COG5443	negative regulation of bacterial-type flagellum assembly
JNX02_RS18545	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JNX02_RS18550	COG1338	Plays a role in the flagellum-specific transport system
JNX02_RS18555	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JNX02_RS18565	COG1766	The M ring may be actively involved in energy transduction
JNX02_RS18590	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JNX02_RS18600	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JNX02_RS18615	COG1677	Flagellar hook-basal body complex protein FliE
JNX02_RS18620	COG1558	bacterial-type flagellum-dependent cell motility
JNX02_RS18650	COG1706	bacterial-type flagellum-dependent cell motility
JNX02_RS18655	COG0745	RESPONSE REGULATOR receiver
JNX02_RS18695	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
JNX02_RS18715	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JNX02_RS18730	COG2801	Transposase and inactivated derivatives
JNX02_RS18745	COG4977	sequence-specific DNA binding
JNX02_RS18750	COG0477	Major facilitator Superfamily
JNX02_RS18755	COG4977	sequence-specific DNA binding
JNX02_RS18825	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JNX02_RS18830	COG1846	Transcriptional regulator
JNX02_RS18880	COG0436	Aminotransferase
JNX02_RS18895	COG1192	Involved in chromosome partitioning
JNX02_RS18900	COG1475	DNA binding
JNX02_RS18910	COG0444	Belongs to the ABC transporter superfamily
JNX02_RS18915	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNX02_RS18925	COG0747	negative chemotaxis
JNX02_RS18935	COG1192	Involved in chromosome partitioning
JNX02_RS18940	COG1475	DNA binding
JNX02_RS18945	COG0640	Transcriptional regulator
JNX02_RS18965	COG1475	DNA binding
JNX02_RS19020	COG1230	cation diffusion facilitator family transporter
JNX02_RS19030	COG0789	Transcriptional regulator
JNX02_RS19055	COG3505	Type IV secretory pathway VirD4
JNX02_RS19075	COG4962	Type ii secretion system protein e
JNX02_RS19080	COG2948	multi-organism process
JNX02_RS19100	COG0741	lytic transglycosylase activity
JNX02_RS19100	COG0739	heme binding
JNX02_RS19100	COG1196	nuclear chromosome segregation
JNX02_RS19120	COG1196	nuclear chromosome segregation
JNX02_RS19120	COG0741	lytic transglycosylase activity
JNX02_RS19120	COG0739	heme binding
JNX02_RS19185	COG1230	cation diffusion facilitator family transporter
JNX02_RS19190	COG0398	Pfam SNARE associated Golgi protein
JNX02_RS19195	COG1376	ErfK ybiS ycfS ynhG family protein
JNX02_RS19230	COG3909	cytochrome
JNX02_RS19235	COG2010	Cytochrome c
JNX02_RS19240	COG2132	Multicopper oxidase
JNX02_RS19250	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JNX02_RS19250	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
JNX02_RS19255	COG2132	Multicopper oxidase
JNX02_RS19270	COG1138	Cytochrome C-type biogenesis protein
JNX02_RS19275	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNX02_RS19280	COG3088	subunit of a heme lyase
JNX02_RS19285	COG4235	cytochrome complex assembly
JNX02_RS19310	COG2217	Heavy metal translocating P-type atpase
JNX02_RS19350	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JNX02_RS19405	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS19415	COG1960	acyl-CoA dehydrogenase activity
JNX02_RS19420	COG1960	acyl-CoA dehydrogenase activity
JNX02_RS19425	COG0604	alcohol dehydrogenase
JNX02_RS19425	COG3321	synthase
JNX02_RS19425	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS19435	COG2130	NADP-dependent
JNX02_RS19445	COG0181	hydroxymethylbilane synthase activity
JNX02_RS19450	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
JNX02_RS19460	COG1192	Involved in chromosome partitioning
JNX02_RS19470	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
JNX02_RS19475	COG3474	cytochrome
JNX02_RS19490	COG1172	Belongs to the binding-protein-dependent transport system permease family
JNX02_RS19495	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
JNX02_RS19515	COG1846	Transcriptional regulator
JNX02_RS19520	COG0408	coproporphyrinogen oxidase activity
JNX02_RS19535	COG1024	Enoyl-CoA hydratase
JNX02_RS19540	COG1960	acyl-CoA dehydrogenase activity
JNX02_RS19550	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
JNX02_RS19560	COG0626	cystathionine gamma-synthase activity
JNX02_RS19570	COG1522	sequence-specific DNA binding
JNX02_RS19580	COG0318	PFAM AMP-dependent synthetase and ligase
JNX02_RS19600	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS19605	COG1028	Short-chain dehydrogenase reductase Sdr
JNX02_RS19615	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JNX02_RS19620	COG1946	Acyl-CoA thioesterase
JNX02_RS19625	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JNX02_RS19635	COG1131	(ABC) transporter
JNX02_RS19715	COG1132	(ABC) transporter
JNX02_RS19770	COG3551	Protein conserved in bacteria