locus-tag class description C1J04_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain C1J04_RS00010 PF02767 DNA polymerase III beta subunit, central domain C1J04_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain C1J04_RS00015 PF02463 RecF/RecN/SMC N terminal domain C1J04_RS00025 PF00204 DNA gyrase B C1J04_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus C1J04_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS00025 PF01751 Toprim domain C1J04_RS00035 PF03466 LysR substrate binding domain C1J04_RS00035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1J04_RS00040 PF01695 IstB-like ATP binding protein C1J04_RS00050 PF00872 Transposase, Mutator family C1J04_RS00145 PF01794 Ferric reductase like transmembrane component C1J04_RS00150 PF00174 Oxidoreductase molybdopterin binding domain C1J04_RS00155 PF17871 AAA lid domain C1J04_RS00155 PF10431 C-terminal, D2-small domain, of ClpB protein C1J04_RS00155 PF02861 Clp amino terminal domain, pathogenicity island component C1J04_RS00155 PF00004 ATPase family associated with various cellular activities (AAA) C1J04_RS00155 PF07724 AAA domain (Cdc48 subfamily) C1J04_RS00165 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C1J04_RS00170 PF00817 impB/mucB/samB family C1J04_RS00170 PF11799 impB/mucB/samB family C-terminal domain C1J04_RS00185 PF00444 Ribosomal protein L36 C1J04_RS00190 PF02798 Glutathione S-transferase, N-terminal domain C1J04_RS00195 PF13416 Bacterial extracellular solute-binding protein C1J04_RS00200 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS00205 PF14535 AMP-binding enzyme C-terminal domain C1J04_RS00205 PF00501 AMP-binding enzyme C1J04_RS00210 PF00005 ABC transporter C1J04_RS00225 PF02653 Branched-chain amino acid transport system / permease component C1J04_RS00230 PF12399 Branched-chain amino acid ATP-binding cassette transporter C1J04_RS00230 PF00005 ABC transporter C1J04_RS00235 PF00501 AMP-binding enzyme C1J04_RS00240 PF13188 PAS domain C1J04_RS00240 PF08448 PAS fold C1J04_RS00240 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS00240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS00240 PF00072 Response regulator receiver domain C1J04_RS00245 PF00072 Response regulator receiver domain C1J04_RS00245 PF00486 Transcriptional regulatory protein, C terminal C1J04_RS00260 PF07687 Peptidase dimerisation domain C1J04_RS00260 PF01546 Peptidase family M20/M25/M40 C1J04_RS00265 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C1J04_RS00265 PF00384 Molybdopterin oxidoreductase C1J04_RS00265 PF01568 Molydopterin dinucleotide binding domain C1J04_RS00265 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C1J04_RS00265 PF12838 4Fe-4S dicluster domain C1J04_RS00275 PF02798 Glutathione S-transferase, N-terminal domain C1J04_RS00275 PF00043 Glutathione S-transferase, C-terminal domain C1J04_RS00310 PF02646 RmuC family C1J04_RS00315 PF01119 DNA mismatch repair protein, C-terminal domain C1J04_RS00315 PF08676 MutL C terminal dimerisation domain C1J04_RS00325 PF00860 Permease family C1J04_RS00330 PF04115 Ureidoglycolate lyase C1J04_RS00335 PF07883 Cupin domain C1J04_RS00335 PF05899 Protein of unknown function (DUF861) C1J04_RS00345 PF00576 HIUase/Transthyretin family C1J04_RS00350 PF01791 DeoC/LacD family aldolase C1J04_RS00355 PF00171 Aldehyde dehydrogenase family C1J04_RS00360 PF05193 Peptidase M16 inactive domain C1J04_RS00365 PF00675 Insulinase (Peptidase family M16) C1J04_RS00365 PF05193 Peptidase M16 inactive domain C1J04_RS00375 PF01252 Signal peptidase (SPase) II C1J04_RS00380 PF01808 AICARFT/IMPCHase bienzyme C1J04_RS00380 PF02142 MGS-like domain C1J04_RS00390 PF01029 NusB family C1J04_RS00390 PF01189 16S rRNA methyltransferase RsmB/F C1J04_RS00405 PF01113 Dihydrodipicolinate reductase, N-terminus C1J04_RS00405 PF05173 Dihydrodipicolinate reductase, C-terminus C1J04_RS00410 PF02033 Ribosome-binding factor A C1J04_RS00415 PF09992 Phosphodiester glycosidase C1J04_RS00420 PF16198 tRNA pseudouridylate synthase B C-terminal domain C1J04_RS00420 PF01509 TruB family pseudouridylate synthase (N terminal domain) C1J04_RS00435 PF00312 Ribosomal protein S15 C1J04_RS00445 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C1J04_RS00445 PF01138 3' exoribonuclease family, domain 1 C1J04_RS00445 PF03725 3' exoribonuclease family, domain 2 C1J04_RS00445 PF00575 S1 RNA binding domain C1J04_RS00445 PF00013 KH domain C1J04_RS00475 PF01883 Iron-sulfur cluster assembly protein C1J04_RS00475 PF10609 NUBPL iron-transfer P-loop NTPase C1J04_RS00510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C1J04_RS00510 PF00384 Molybdopterin oxidoreductase C1J04_RS00510 PF01568 Molydopterin dinucleotide binding domain C1J04_RS00515 PF13247 4Fe-4S dicluster domain C1J04_RS00525 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS00530 PF17912 MalK OB fold domain C1J04_RS00530 PF00005 ABC transporter C1J04_RS00535 PF12849 PBP superfamily domain C1J04_RS00545 PF00578 AhpC/TSA family C1J04_RS00545 PF10417 C-terminal domain of 1-Cys peroxiredoxin C1J04_RS00550 PF00171 Aldehyde dehydrogenase family C1J04_RS00555 PF00849 RNA pseudouridylate synthase C1J04_RS00565 PF00892 EamA-like transporter family C1J04_RS00580 PF02803 Thiolase, C-terminal domain C1J04_RS00580 PF00108 Thiolase, N-terminal domain C1J04_RS00585 PF01740 STAS domain C1J04_RS00620 PF09397 Ftsk gamma domain C1J04_RS00620 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C1J04_RS00620 PF17854 FtsK alpha domain C1J04_RS00620 PF01580 FtsK/SpoIIIE family C1J04_RS00625 PF00155 Aminotransferase class I and II C1J04_RS00630 PF01425 Amidase C1J04_RS00635 PF01494 FAD binding domain C1J04_RS00640 PF03966 Trm112p-like protein C1J04_RS00650 PF00085 Thioredoxin C1J04_RS00655 PF03372 Endonuclease/Exonuclease/phosphatase family C1J04_RS00660 PF00072 Response regulator receiver domain C1J04_RS00660 PF00486 Transcriptional regulatory protein, C terminal C1J04_RS00665 PF00925 GTP cyclohydrolase II C1J04_RS00675 PF01168 Alanine racemase, N-terminal domain C1J04_RS00680 PF13609 Gram-negative porin C1J04_RS00690 PF08264 Anticodon-binding domain of tRNA C1J04_RS00690 PF13603 Leucyl-tRNA synthetase, Domain 2 C1J04_RS00690 PF00133 tRNA synthetases class I (I, L, M and V) C1J04_RS00690 PF09334 tRNA synthetases class I (M) C1J04_RS00705 PF02798 Glutathione S-transferase, N-terminal domain C1J04_RS00705 PF00043 Glutathione S-transferase, C-terminal domain C1J04_RS00710 PF01593 Flavin containing amine oxidoreductase C1J04_RS00715 PF00378 Enoyl-CoA hydratase/isomerase C1J04_RS00730 PF01523 Putative modulator of DNA gyrase C1J04_RS00735 PF00459 Inositol monophosphatase family C1J04_RS00745 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C1J04_RS00750 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C1J04_RS00755 PF02515 CoA-transferase family III C1J04_RS00770 PF00730 HhH-GPD superfamily base excision DNA repair protein C1J04_RS00770 PF00633 Helix-hairpin-helix motif C1J04_RS00770 PF10576 Iron-sulfur binding domain of endonuclease III C1J04_RS00770 PF14815 NUDIX domain C1J04_RS00775 PF00487 Fatty acid desaturase C1J04_RS00780 PF01555 DNA methylase C1J04_RS00780 PF18755 Restriction Enzyme Adenine Methylase Associated C1J04_RS00785 PF01351 Ribonuclease HII C1J04_RS00805 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C1J04_RS00805 PF00356 Bacterial regulatory proteins, lacI family C1J04_RS00810 PF03480 Bacterial extracellular solute-binding protein, family 7 C1J04_RS00820 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1J04_RS00825 PF00920 Dehydratase family C1J04_RS00830 PF00294 pfkB family carbohydrate kinase C1J04_RS00835 PF03328 HpcH/HpaI aldolase/citrate lyase family C1J04_RS00845 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1J04_RS00845 PF02774 Semialdehyde dehydrogenase, dimerisation domain C1J04_RS00855 PF00484 Carbonic anhydrase C1J04_RS00865 PF00883 Cytosol aminopeptidase family, catalytic domain C1J04_RS00865 PF02789 Cytosol aminopeptidase family, N-terminal domain C1J04_RS00870 PF00877 NlpC/P60 family C1J04_RS00880 PF03061 Thioesterase superfamily C1J04_RS00885 PF14535 AMP-binding enzyme C-terminal domain C1J04_RS00885 PF00501 AMP-binding enzyme C1J04_RS00895 PF03547 Membrane transport protein C1J04_RS00900 PF00756 Putative esterase C1J04_RS00905 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C1J04_RS00915 PF02423 Ornithine cyclodeaminase/mu-crystallin family C1J04_RS00920 PF00561 alpha/beta hydrolase fold C1J04_RS00930 PF03969 AFG1-like ATPase C1J04_RS00940 PF02875 Mur ligase family, glutamate ligase domain C1J04_RS00940 PF08245 Mur ligase middle domain C1J04_RS00945 PF01039 Carboxyl transferase domain C1J04_RS00945 PF17848 Acetyl-coA carboxylase zinc finger domain C1J04_RS00955 PF00664 ABC transporter transmembrane region C1J04_RS00955 PF03412 Peptidase C39 family C1J04_RS00955 PF00005 ABC transporter C1J04_RS00960 PF00920 Dehydratase family C1J04_RS00980 PF02254 TrkA-N domain C1J04_RS00980 PF02080 TrkA-C domain C1J04_RS00985 PF02386 Cation transport protein C1J04_RS00990 PF03572 Peptidase family S41 C1J04_RS00990 PF13180 PDZ domain C1J04_RS01000 PF01676 Metalloenzyme superfamily C1J04_RS01000 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C1J04_RS01015 PF01612 3'-5' exonuclease C1J04_RS01015 PF00476 DNA polymerase family A C1J04_RS01015 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C1J04_RS01015 PF01367 5'-3' exonuclease, C-terminal SAM fold C1J04_RS01020 PF01261 Xylose isomerase-like TIM barrel C1J04_RS01030 PF17863 AAA lid domain C1J04_RS01030 PF07726 ATPase family associated with various cellular activities (AAA) C1J04_RS01050 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS01050 PF00072 Response regulator receiver domain C1J04_RS01050 PF01627 Hpt domain C1J04_RS01050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS01050 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C1J04_RS01050 PF00672 HAMP domain C1J04_RS01055 PF03883 Peroxide stress protein YaaA C1J04_RS01060 PF09382 RQC domain C1J04_RS01060 PF00270 DEAD/DEAH box helicase C1J04_RS01060 PF16124 RecQ zinc-binding C1J04_RS01060 PF00271 Helicase conserved C-terminal domain C1J04_RS01060 PF00570 HRDC domain C1J04_RS01065 PF02325 YGGT family C1J04_RS01080 PF03411 Penicillin-insensitive murein endopeptidase C1J04_RS01090 PF02592 Putative vitamin uptake transporter C1J04_RS01095 PF00472 RF-1 domain C1J04_RS01105 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C1J04_RS01105 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C1J04_RS01110 PF01914 MarC family integral membrane protein C1J04_RS01115 PF00857 Isochorismatase family C1J04_RS01120 PF17773 UPF0176 acylphosphatase like domain C1J04_RS01120 PF00581 Rhodanese-like domain C1J04_RS01125 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C1J04_RS01125 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C1J04_RS01125 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C1J04_RS01130 PF01266 FAD dependent oxidoreductase C1J04_RS01135 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS01140 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS01145 PF00005 ABC transporter C1J04_RS01145 PF08402 TOBE domain C1J04_RS01150 PF13416 Bacterial extracellular solute-binding protein C1J04_RS01155 PF00392 Bacterial regulatory proteins, gntR family C1J04_RS01155 PF07729 FCD domain C1J04_RS01160 PF00202 Aminotransferase class-III C1J04_RS01165 PF08402 TOBE domain C1J04_RS01165 PF00005 ABC transporter C1J04_RS01175 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS01180 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS01185 PF13406 Transglycosylase SLT domain C1J04_RS01190 PF08461 Ribonuclease R winged-helix domain C1J04_RS01190 PF00773 RNB domain C1J04_RS01190 PF00575 S1 RNA binding domain C1J04_RS01190 PF17876 Cold shock domain C1J04_RS01190 PF08206 Ribonuclease B OB domain C1J04_RS01205 PF07687 Peptidase dimerisation domain C1J04_RS01205 PF01546 Peptidase family M20/M25/M40 C1J04_RS01220 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal C1J04_RS01220 PF14602 Hexapeptide repeat of succinyl-transferase C1J04_RS01220 PF00132 Bacterial transferase hexapeptide (six repeats) C1J04_RS01235 PF04055 Radical SAM superfamily C1J04_RS01250 PF18429 Domain of unknown function (DUF5609) C1J04_RS01255 PF02803 Thiolase, C-terminal domain C1J04_RS01255 PF00108 Thiolase, N-terminal domain C1J04_RS01260 PF05138 Phenylacetic acid catabolic protein C1J04_RS01265 PF06243 Phenylacetic acid degradation B C1J04_RS01270 PF05138 Phenylacetic acid catabolic protein C1J04_RS01275 PF01883 Iron-sulfur cluster assembly protein C1J04_RS01280 PF00970 Oxidoreductase FAD-binding domain C1J04_RS01280 PF00111 2Fe-2S iron-sulfur cluster binding domain C1J04_RS01280 PF00175 Oxidoreductase NAD-binding domain C1J04_RS01285 PF00171 Aldehyde dehydrogenase family C1J04_RS01285 PF01575 MaoC like domain C1J04_RS01300 PF01380 SIS domain C1J04_RS01300 PF00571 CBS domain C1J04_RS01315 PF00005 ABC transporter C1J04_RS01320 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus C1J04_RS01320 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C1J04_RS01325 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C1J04_RS01350 PF16363 GDP-mannose 4,6 dehydratase C1J04_RS01355 PF00483 Nucleotidyl transferase C1J04_RS01360 PF02348 Cytidylyltransferase C1J04_RS01365 PF00459 Inositol monophosphatase family C1J04_RS01375 PF13532 2OG-Fe(II) oxygenase superfamily C1J04_RS01380 PF00012 Hsp70 protein C1J04_RS01385 PF01556 DnaJ C terminal domain C1J04_RS01385 PF00684 DnaJ central domain C1J04_RS01385 PF00226 DnaJ domain C1J04_RS01390 PF04002 RadC-like JAB domain C1J04_RS01410 PF13614 AAA domain C1J04_RS01410 PF02706 Chain length determinant protein C1J04_RS01410 PF13807 G-rich domain on putative tyrosine kinase C1J04_RS01420 PF02470 MlaD protein C1J04_RS01425 PF04403 Paraquat-inducible protein A C1J04_RS01435 PF01965 DJ-1/PfpI family C1J04_RS01450 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C1J04_RS01450 PF01276 Orn/Lys/Arg decarboxylase, major domain C1J04_RS01450 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain C1J04_RS01455 PF00795 Carbon-nitrogen hydrolase C1J04_RS01470 PF01645 Conserved region in glutamate synthase C1J04_RS01475 PF00202 Aminotransferase class-III C1J04_RS01480 PF07883 Cupin domain C1J04_RS01480 PF01381 Helix-turn-helix C1J04_RS01485 PF07568 Histidine kinase C1J04_RS01485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS01485 PF12282 Signal transduction histidine kinase C1J04_RS01490 PF04542 Sigma-70 region 2 C1J04_RS01490 PF08281 Sigma-70, region 4 C1J04_RS01500 PF00072 Response regulator receiver domain C1J04_RS01525 PF03631 Virulence factor BrkB C1J04_RS01530 PF01226 Formate/nitrite transporter C1J04_RS01540 PF07687 Peptidase dimerisation domain C1J04_RS01540 PF01546 Peptidase family M20/M25/M40 C1J04_RS01545 PF00012 Hsp70 protein C1J04_RS01550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1J04_RS01555 PF00005 ABC transporter C1J04_RS01555 PF00664 ABC transporter transmembrane region C1J04_RS01585 PF00529 HlyD membrane-fusion protein of T1SS C1J04_RS01585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1J04_RS01600 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS01605 PF12911 N-terminal TM domain of oligopeptide transport permease C C1J04_RS01605 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS01610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1J04_RS01610 PF00005 ABC transporter C1J04_RS01615 PF03576 Peptidase family S58 C1J04_RS01625 PF01557 Fumarylacetoacetate (FAA) hydrolase family C1J04_RS01650 PF00814 Glycoprotease family C1J04_RS01655 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C1J04_RS01655 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C1J04_RS01660 PF03795 YCII-related domain C1J04_RS01675 PF03150 Di-haem cytochrome c peroxidase C1J04_RS01685 PF01325 Iron dependent repressor, N-terminal DNA binding domain C1J04_RS01685 PF00480 ROK family C1J04_RS01690 PF13407 Periplasmic binding protein domain C1J04_RS01695 PF02653 Branched-chain amino acid transport system / permease component C1J04_RS01700 PF00005 ABC transporter C1J04_RS01705 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C1J04_RS01705 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C1J04_RS01710 PF01261 Xylose isomerase-like TIM barrel C1J04_RS01720 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C1J04_RS01720 PF05221 S-adenosyl-L-homocysteine hydrolase C1J04_RS01730 PF01966 HD domain C1J04_RS01740 PF00072 Response regulator receiver domain C1J04_RS01745 PF02630 SCO1/SenC C1J04_RS01750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS01750 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS01755 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS01755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS01760 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C1J04_RS01765 PF01636 Phosphotransferase enzyme family C1J04_RS01770 PF12804 MobA-like NTP transferase domain C1J04_RS01780 PF13361 UvrD-like helicase C-terminal domain C1J04_RS01780 PF00580 UvrD/REP helicase N-terminal domain C1J04_RS01780 PF12705 PD-(D/E)XK nuclease superfamily C1J04_RS01785 PF00085 Thioredoxin C1J04_RS01795 PF00227 Proteasome subunit C1J04_RS01800 PF07724 AAA domain (Cdc48 subfamily) C1J04_RS01800 PF00004 ATPase family associated with various cellular activities (AAA) C1J04_RS01830 PF02556 Preprotein translocase subunit SecB C1J04_RS01835 PF00929 Exonuclease C1J04_RS01840 PF01121 Dephospho-CoA kinase C1J04_RS01845 PF01488 Shikimate / quinate 5-dehydrogenase C1J04_RS01845 PF08501 Shikimate dehydrogenase substrate binding domain C1J04_RS01845 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C1J04_RS01850 PF02545 Maf-like protein C1J04_RS01855 PF03653 Uncharacterised protein family (UPF0093) C1J04_RS01860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1J04_RS01860 PF07498 Rho termination factor, N-terminal domain C1J04_RS01860 PF07497 Rho termination factor, RNA-binding domain C1J04_RS01865 PF12631 MnmE helical domain C1J04_RS01865 PF10396 GTP-binding protein TrmE N-terminus C1J04_RS01865 PF01926 50S ribosome-binding GTPase C1J04_RS01870 PF01134 Glucose inhibited division protein A C1J04_RS01870 PF13932 GidA associated domain C1J04_RS01875 PF02527 rRNA small subunit methyltransferase G C1J04_RS01880 PF13614 AAA domain C1J04_RS01885 PF02195 ParB-like nuclease domain C1J04_RS01885 PF17762 HTH domain found in ParB protein C1J04_RS01890 PF06969 HemN C-terminal domain C1J04_RS01890 PF04055 Radical SAM superfamily C1J04_RS01895 PF01725 Ham1 family C1J04_RS01900 PF01138 3' exoribonuclease family, domain 1 C1J04_RS01900 PF03725 3' exoribonuclease family, domain 2 C1J04_RS01905 PF01628 HrcA protein C terminal domain C1J04_RS01910 PF01025 GrpE C1J04_RS01915 PF01624 MutS domain I C1J04_RS01915 PF05188 MutS domain II C1J04_RS01915 PF05192 MutS domain III C1J04_RS01915 PF00488 MutS domain V C1J04_RS01915 PF05190 MutS family domain IV C1J04_RS01920 PF01515 Phosphate acetyl/butaryl transferase C1J04_RS01920 PF03949 Malic enzyme, NAD binding domain C1J04_RS01920 PF00390 Malic enzyme, N-terminal domain C1J04_RS01925 PF00294 pfkB family carbohydrate kinase C1J04_RS01930 PF01625 Peptide methionine sulfoxide reductase C1J04_RS01935 PF01063 Amino-transferase class IV C1J04_RS01950 PF00764 Arginosuccinate synthase C1J04_RS01955 PF00291 Pyridoxal-phosphate dependent enzyme C1J04_RS01955 PF00585 C-terminal regulatory domain of Threonine dehydratase C1J04_RS01970 PF00293 NUDIX domain C1J04_RS01975 PF01430 Hsp33 protein C1J04_RS01980 PF00293 NUDIX domain C1J04_RS01985 PF13735 tRNA nucleotidyltransferase domain 2 putative C1J04_RS01985 PF12627 Probable RNA and SrmB- binding site of polymerase A C1J04_RS01985 PF01743 Poly A polymerase head domain C1J04_RS01990 PF00664 ABC transporter transmembrane region C1J04_RS01990 PF00005 ABC transporter C1J04_RS01995 PF00005 ABC transporter C1J04_RS01995 PF00664 ABC transporter transmembrane region C1J04_RS02000 PF05958 tRNA (Uracil-5-)-methyltransferase C1J04_RS02010 PF03734 L,D-transpeptidase catalytic domain C1J04_RS02020 PF03734 L,D-transpeptidase catalytic domain C1J04_RS02030 PF00762 Ferrochelatase C1J04_RS02045 PF00462 Glutaredoxin C1J04_RS02050 PF00795 Carbon-nitrogen hydrolase C1J04_RS02065 PF00561 alpha/beta hydrolase fold C1J04_RS02075 PF02576 RimP N-terminal domain C1J04_RS02075 PF17384 RimP C-terminal SH3 domain C1J04_RS02080 PF13184 NusA-like KH domain C1J04_RS02080 PF00575 S1 RNA binding domain C1J04_RS02080 PF08529 NusA N-terminal domain C1J04_RS02090 PF04760 Translation initiation factor IF-2, N-terminal region C1J04_RS02090 PF08364 Bacterial translation initiation factor IF-2 associated region C1J04_RS02090 PF00009 Elongation factor Tu GTP binding domain C1J04_RS02090 PF11987 Translation-initiation factor 2 C1J04_RS02100 PF02142 MGS-like domain C1J04_RS02100 PF00781 Diacylglycerol kinase catalytic domain C1J04_RS02105 PF00293 NUDIX domain C1J04_RS02110 PF01960 ArgJ family C1J04_RS02115 PF05698 Bacterial trigger factor protein (TF) C-terminus C1J04_RS02120 PF01043 SecA preprotein cross-linking domain C1J04_RS02120 PF07517 SecA DEAD-like domain C1J04_RS02120 PF02810 SEC-C motif C1J04_RS02120 PF07516 SecA Wing and Scaffold domain C1J04_RS02130 PF02397 Bacterial sugar transferase C1J04_RS02135 PF00149 Calcineurin-like phosphoesterase C1J04_RS02140 PF06082 Exopolysaccharide biosynthesis protein YbjH C1J04_RS02150 PF18412 Outer-membrane lipoprotein Wza C-terminal domain C1J04_RS02150 PF02563 Polysaccharide biosynthesis/export protein C1J04_RS02150 PF10531 SLBB domain C1J04_RS02155 PF00535 Glycosyl transferase family 2 C1J04_RS02175 PF00293 NUDIX domain C1J04_RS02180 PF02515 CoA-transferase family III C1J04_RS02205 PF00005 ABC transporter C1J04_RS02235 PF00132 Bacterial transferase hexapeptide (six repeats) C1J04_RS02245 PF02769 AIR synthase related protein, C-terminal domain C1J04_RS02245 PF00586 AIR synthase related protein, N-terminal domain C1J04_RS02255 PF13514 AAA domain C1J04_RS02305 PF02673 Bacitracin resistance protein BacA C1J04_RS02310 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1J04_RS02310 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C1J04_RS02315 PF01645 Conserved region in glutamate synthase C1J04_RS02315 PF01493 GXGXG motif C1J04_RS02315 PF04898 Glutamate synthase central domain C1J04_RS02315 PF00310 Glutamine amidotransferases class-II C1J04_RS02325 PF00912 Transglycosylase C1J04_RS02330 PF00043 Glutathione S-transferase, C-terminal domain C1J04_RS02330 PF13417 Glutathione S-transferase, N-terminal domain C1J04_RS02335 PF08331 Domain of unknown function (DUF1730) C1J04_RS02340 PF05378 Hydantoinase/oxoprolinase N-terminal region C1J04_RS02340 PF01968 Hydantoinase/oxoprolinase C1J04_RS02345 PF01625 Peptide methionine sulfoxide reductase C1J04_RS02350 PF01641 SelR domain C1J04_RS02355 PF00892 EamA-like transporter family C1J04_RS02365 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus C1J04_RS02365 PF01048 Phosphorylase superfamily C1J04_RS02370 PF01979 Amidohydrolase family C1J04_RS02370 PF13382 Adenine deaminase C-terminal domain C1J04_RS02375 PF13439 Glycosyltransferase Family 4 C1J04_RS02375 PF00534 Glycosyl transferases group 1 C1J04_RS02390 PF00005 ABC transporter C1J04_RS02395 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS02405 PF01264 Chorismate synthase C1J04_RS02410 PF00892 EamA-like transporter family C1J04_RS02420 PF01063 Amino-transferase class IV C1J04_RS02425 PF12802 MarR family C1J04_RS02430 PF00072 Response regulator receiver domain C1J04_RS02430 PF00486 Transcriptional regulatory protein, C terminal C1J04_RS02435 PF02609 Exonuclease VII small subunit C1J04_RS02440 PF00348 Polyprenyl synthetase C1J04_RS02445 PF02780 Transketolase, C-terminal domain C1J04_RS02445 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C1J04_RS02445 PF02779 Transketolase, pyrimidine binding domain C1J04_RS02450 PF00885 6,7-dimethyl-8-ribityllumazine synthase C1J04_RS02455 PF04299 Putative FMN-binding domain C1J04_RS02460 PF00043 Glutathione S-transferase, C-terminal domain C1J04_RS02460 PF13417 Glutathione S-transferase, N-terminal domain C1J04_RS02465 PF00355 Rieske [2Fe-2S] domain C1J04_RS02465 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal C1J04_RS02470 PF00033 Cytochrome b/b6/petB C1J04_RS02470 PF00032 Cytochrome b(C-terminal)/b6/petD C1J04_RS02475 PF02167 Cytochrome C1 family C1J04_RS02485 PF04055 Radical SAM superfamily C1J04_RS02485 PF00919 Uncharacterized protein family UPF0004 C1J04_RS02490 PF01678 Diaminopimelate epimerase C1J04_RS02500 PF03746 LamB/YcsF family C1J04_RS02510 PF02682 Carboxyltransferase domain, subdomain C and D C1J04_RS02515 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1J04_RS02525 PF03480 Bacterial extracellular solute-binding protein, family 7 C1J04_RS02530 PF01266 FAD dependent oxidoreductase C1J04_RS02535 PF06224 Winged helix DNA-binding domain C1J04_RS02540 PF00356 Bacterial regulatory proteins, lacI family C1J04_RS02540 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C1J04_RS02550 PF14765 Polyketide synthase dehydratase C1J04_RS02550 PF00550 Phosphopantetheine attachment site C1J04_RS02550 PF08659 KR domain C1J04_RS02550 PF02801 Beta-ketoacyl synthase, C-terminal domain C1J04_RS02550 PF00109 Beta-ketoacyl synthase, N-terminal domain C1J04_RS02550 PF16197 Ketoacyl-synthetase C-terminal extension C1J04_RS02550 PF09277 Erythronolide synthase, docking C1J04_RS02550 PF08990 Erythronolide synthase docking C1J04_RS02550 PF08240 Alcohol dehydrogenase GroES-like domain C1J04_RS02550 PF00698 Acyl transferase domain C1J04_RS02560 PF03861 ANTAR domain C1J04_RS02560 PF08376 Nitrate and nitrite sensing C1J04_RS02565 PF00005 ABC transporter C1J04_RS02575 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS02580 PF00005 ABC transporter C1J04_RS02585 PF18267 Rubredoxin NAD+ reductase C-terminal domain C1J04_RS02585 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1J04_RS02585 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C1J04_RS02585 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C1J04_RS02585 PF04324 BFD-like [2Fe-2S] binding domain C1J04_RS02590 PF00355 Rieske [2Fe-2S] domain C1J04_RS02595 PF04324 BFD-like [2Fe-2S] binding domain C1J04_RS02595 PF01568 Molydopterin dinucleotide binding domain C1J04_RS02595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C1J04_RS02595 PF00384 Molybdopterin oxidoreductase C1J04_RS02600 PF02885 Glycosyl transferase family, helical bundle domain C1J04_RS02600 PF00591 Glycosyl transferase family, a/b domain C1J04_RS02605 PF14824 Sirohaem biosynthesis protein central C1J04_RS02605 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1J04_RS02605 PF10414 Sirohaem synthase dimerisation region C1J04_RS02615 PF07715 TonB-dependent Receptor Plug Domain C1J04_RS02615 PF00593 TonB dependent receptor C1J04_RS02620 PF01497 Periplasmic binding protein C1J04_RS02625 PF01032 FecCD transport family C1J04_RS02630 PF00005 ABC transporter C1J04_RS02635 PF00005 ABC transporter C1J04_RS02635 PF00664 ABC transporter transmembrane region C1J04_RS02640 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS02640 PF08521 Two-component sensor kinase N-terminal C1J04_RS02640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS02645 PF00072 Response regulator receiver domain C1J04_RS02645 PF00486 Transcriptional regulatory protein, C terminal C1J04_RS02650 PF01219 Prokaryotic diacylglycerol kinase C1J04_RS02655 PF00884 Sulfatase C1J04_RS02655 PF08019 Phosphoethanolamine transferase EptA/EptB C1J04_RS02665 PF00180 Isocitrate/isopropylmalate dehydrogenase C1J04_RS02680 PF00694 Aconitase C-terminal domain C1J04_RS02685 PF00330 Aconitase family (aconitate hydratase) C1J04_RS02695 PF12794 Mechanosensitive ion channel inner membrane domain 1 C1J04_RS02695 PF12795 Mechanosensitive ion channel porin domain C1J04_RS02695 PF00924 Mechanosensitive ion channel C1J04_RS02705 PF02590 Predicted SPOUT methyltransferase C1J04_RS02720 PF01565 FAD binding domain C1J04_RS02720 PF02913 FAD linked oxidases, C-terminal domain C1J04_RS02725 PF01565 FAD binding domain C1J04_RS02735 PF13183 4Fe-4S dicluster domain C1J04_RS02735 PF02754 Cysteine-rich domain C1J04_RS02745 PF00011 Hsp20/alpha crystallin family C1J04_RS02750 PF00155 Aminotransferase class I and II C1J04_RS02755 PF00171 Aldehyde dehydrogenase family C1J04_RS02765 PF01321 Creatinase/Prolidase N-terminal domain C1J04_RS02765 PF00557 Metallopeptidase family M24 C1J04_RS02770 PF07568 Histidine kinase C1J04_RS02770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS02770 PF12282 Signal transduction histidine kinase C1J04_RS02780 PF07509 Protein of unknown function (DUF1523) C1J04_RS02785 PF01230 HIT domain C1J04_RS02800 PF01668 SmpB protein C1J04_RS02805 PF00581 Rhodanese-like domain C1J04_RS02810 PF00155 Aminotransferase class I and II C1J04_RS02815 PF00909 Ammonium Transporter Family C1J04_RS02820 PF00543 Nitrogen regulatory protein P-II C1J04_RS02825 PF00912 Transglycosylase C1J04_RS02825 PF00905 Penicillin binding protein transpeptidase domain C1J04_RS02825 PF17092 Penicillin-binding protein OB-like domain C1J04_RS02835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1J04_RS02835 PF03466 LysR substrate binding domain C1J04_RS02840 PF04333 MlaA lipoprotein C1J04_RS02850 PF03009 Glycerophosphoryl diester phosphodiesterase family C1J04_RS02860 PF01329 Pterin 4 alpha carbinolamine dehydratase C1J04_RS02865 PF08534 Redoxin C1J04_RS02870 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1J04_RS02870 PF14759 Reductase C-terminal C1J04_RS02880 PF02666 Phosphatidylserine decarboxylase C1J04_RS02885 PF01066 CDP-alcohol phosphatidyltransferase C1J04_RS02890 PF00557 Metallopeptidase family M24 C1J04_RS02895 PF03749 Sugar fermentation stimulation protein RE domain C1J04_RS02895 PF17746 SfsA N-terminal OB domain C1J04_RS02900 PF02464 Competence-damaged protein C1J04_RS02900 PF00994 Probable molybdopterin binding domain C1J04_RS02900 PF18146 Damage-inducible protein CinA KH domain C1J04_RS02920 PF03466 LysR substrate binding domain C1J04_RS02920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1J04_RS02925 PF01544 CorA-like Mg2+ transporter protein C1J04_RS02930 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C1J04_RS02930 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1J04_RS02935 PF00293 NUDIX domain C1J04_RS02940 PF00551 Formyl transferase C1J04_RS02950 PF00294 pfkB family carbohydrate kinase C1J04_RS02955 PF00730 HhH-GPD superfamily base excision DNA repair protein C1J04_RS02955 PF00633 Helix-hairpin-helix motif C1J04_RS02955 PF10576 Iron-sulfur binding domain of endonuclease III C1J04_RS02960 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C1J04_RS02960 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C1J04_RS02965 PF00691 OmpA family C1J04_RS02970 PF01266 FAD dependent oxidoreductase C1J04_RS02970 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C1J04_RS02975 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C1J04_RS02975 PF01266 FAD dependent oxidoreductase C1J04_RS02980 PF00892 EamA-like transporter family C1J04_RS02985 PF01464 Transglycosylase SLT domain C1J04_RS02985 PF14718 Soluble lytic murein transglycosylase L domain C1J04_RS02990 PF00701 Dihydrodipicolinate synthetase family C1J04_RS03000 PF00202 Aminotransferase class-III C1J04_RS03005 PF00270 DEAD/DEAH box helicase C1J04_RS03005 PF00271 Helicase conserved C-terminal domain C1J04_RS03020 PF02492 CobW/HypB/UreG, nucleotide-binding domain C1J04_RS03025 PF01730 UreF C1J04_RS03030 PF05194 UreE urease accessory protein, C-terminal domain C1J04_RS03030 PF02814 UreE urease accessory protein, N-terminal domain C1J04_RS03035 PF00449 Urease alpha-subunit, N-terminal domain C1J04_RS03035 PF01979 Amidohydrolase family C1J04_RS03040 PF00699 Urease beta subunit C1J04_RS03050 PF00547 Urease, gamma subunit C1J04_RS03055 PF01774 UreD urease accessory protein C1J04_RS03060 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1J04_RS03075 PF12833 Helix-turn-helix domain C1J04_RS03075 PF02311 AraC-like ligand binding domain C1J04_RS03080 PF01494 FAD binding domain C1J04_RS03085 PF08240 Alcohol dehydrogenase GroES-like domain C1J04_RS03085 PF00107 Zinc-binding dehydrogenase C1J04_RS03090 PF16925 Tetracyclin repressor-like, C-terminal domain C1J04_RS03090 PF00440 Bacterial regulatory proteins, tetR family C1J04_RS03120 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C1J04_RS03125 PF01810 LysE type translocator C1J04_RS03130 PF03328 HpcH/HpaI aldolase/citrate lyase family C1J04_RS03140 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C1J04_RS03140 PF13378 Enolase C-terminal domain-like C1J04_RS03145 PF01063 Amino-transferase class IV C1J04_RS03155 PF02887 Pyruvate kinase, alpha/beta domain C1J04_RS03155 PF00224 Pyruvate kinase, barrel domain C1J04_RS03165 PF01632 Ribosomal protein L35 C1J04_RS03170 PF00453 Ribosomal protein L20 C1J04_RS03180 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C1J04_RS03180 PF01409 tRNA synthetases class II core domain (F) C1J04_RS03195 PF01588 Putative tRNA binding domain C1J04_RS03195 PF03147 Ferredoxin-fold anticodon binding domain C1J04_RS03195 PF03484 tRNA synthetase B5 domain C1J04_RS03195 PF03483 B3/4 domain C1J04_RS03195 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C1J04_RS03200 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ C1J04_RS03205 PF01741 Large-conductance mechanosensitive channel, MscL C1J04_RS03210 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C1J04_RS03210 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C1J04_RS03215 PF01037 Lrp/AsnC ligand binding domain C1J04_RS03225 PF01165 Ribosomal protein S21 C1J04_RS03235 PF00005 ABC transporter C1J04_RS03240 PF02361 Cobalt transport protein C1J04_RS03245 PF00109 Beta-ketoacyl synthase, N-terminal domain C1J04_RS03245 PF16197 Ketoacyl-synthetase C-terminal extension C1J04_RS03245 PF02801 Beta-ketoacyl synthase, C-terminal domain C1J04_RS03245 PF00107 Zinc-binding dehydrogenase C1J04_RS03245 PF08240 Alcohol dehydrogenase GroES-like domain C1J04_RS03245 PF00698 Acyl transferase domain C1J04_RS03245 PF14765 Polyketide synthase dehydratase C1J04_RS03245 PF08659 KR domain C1J04_RS03245 PF00550 Phosphopantetheine attachment site C1J04_RS03250 PF00072 Response regulator receiver domain C1J04_RS03250 PF01627 Hpt domain C1J04_RS03250 PF00672 HAMP domain C1J04_RS03250 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS03250 PF17149 Periplasmic sensor domain found in signal transduction proteins C1J04_RS03250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS03260 PF00196 Bacterial regulatory proteins, luxR family C1J04_RS03260 PF00072 Response regulator receiver domain C1J04_RS03265 PF00445 Ribonuclease T2 family C1J04_RS03280 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C1J04_RS03280 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C1J04_RS03285 PF01336 OB-fold nucleic acid binding domain C1J04_RS03285 PF00152 tRNA synthetases class II (D, K and N) C1J04_RS03285 PF02938 GAD domain C1J04_RS03300 PF00486 Transcriptional regulatory protein, C terminal C1J04_RS03300 PF00072 Response regulator receiver domain C1J04_RS03320 PF00881 Nitroreductase family C1J04_RS03325 PF00850 Histone deacetylase domain C1J04_RS03330 PF00579 tRNA synthetases class I (W and Y) C1J04_RS03340 PF03023 Lipid II flippase MurJ C1J04_RS03345 PF08335 GlnD PII-uridylyltransferase C1J04_RS03345 PF01966 HD domain C1J04_RS03355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1J04_RS03360 PF02021 Uncharacterised protein family UPF0102 C1J04_RS03365 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C1J04_RS03365 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C1J04_RS03370 PF07859 alpha/beta hydrolase fold C1J04_RS03375 PF01078 Magnesium chelatase, subunit ChlI C1J04_RS03375 PF13335 Magnesium chelatase, subunit ChlI C-terminal C1J04_RS03385 PF04545 Sigma-70, region 4 C1J04_RS03385 PF04542 Sigma-70 region 2 C1J04_RS03385 PF00140 Sigma-70 factor, region 1.2 C1J04_RS03390 PF02441 Flavoprotein C1J04_RS03390 PF04127 DNA / pantothenate metabolism flavoprotein C1J04_RS03395 PF00692 dUTPase C1J04_RS03400 PF00005 ABC transporter C1J04_RS03410 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS03415 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS03420 PF12804 MobA-like NTP transferase domain C1J04_RS03420 PF14602 Hexapeptide repeat of succinyl-transferase C1J04_RS03420 PF00132 Bacterial transferase hexapeptide (six repeats) C1J04_RS03425 PF00392 Bacterial regulatory proteins, gntR family C1J04_RS03425 PF07702 UTRA domain C1J04_RS03430 PF06754 Phosphonate metabolism protein PhnG C1J04_RS03435 PF05845 Bacterial phosphonate metabolism protein (PhnH) C1J04_RS03440 PF05861 Bacterial phosphonate metabolism protein (PhnI) C1J04_RS03445 PF06007 Phosphonate metabolism protein PhnJ C1J04_RS03450 PF00005 ABC transporter C1J04_RS03455 PF00005 ABC transporter C1J04_RS03465 PF07969 Amidohydrolase family C1J04_RS03470 PF00899 ThiF family C1J04_RS03475 PF01432 Peptidase family M3 C1J04_RS03480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1J04_RS03485 PF01098 Cell cycle protein C1J04_RS03490 PF03717 Penicillin-binding Protein dimerisation domain C1J04_RS03490 PF00905 Penicillin binding protein transpeptidase domain C1J04_RS03500 PF04085 rod shape-determining protein MreC C1J04_RS03520 PF00682 HMGL-like C1J04_RS03520 PF08502 LeuA allosteric (dimerisation) domain C1J04_RS03530 PF04244 Deoxyribodipyrimidine photo-lyase-related protein C1J04_RS03540 PF00795 Carbon-nitrogen hydrolase C1J04_RS03540 PF02540 NAD synthase C1J04_RS03545 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1J04_RS03550 PF01554 MatE C1J04_RS03560 PF01571 Aminomethyltransferase folate-binding domain C1J04_RS03560 PF08669 Glycine cleavage T-protein C-terminal barrel domain C1J04_RS03565 PF01597 Glycine cleavage H-protein C1J04_RS03570 PF02347 Glycine cleavage system P-protein C1J04_RS03575 PF00459 Inositol monophosphatase family C1J04_RS03585 PF00005 ABC transporter C1J04_RS03590 PF13472 GDSL-like Lipase/Acylhydrolase family C1J04_RS03595 PF00313 'Cold-shock' DNA-binding domain C1J04_RS03600 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C1J04_RS03600 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1J04_RS03605 PF01180 Dihydroorotate dehydrogenase C1J04_RS03610 PF08362 YcdC-like protein, C-terminal region C1J04_RS03610 PF00440 Bacterial regulatory proteins, tetR family C1J04_RS03615 PF07687 Peptidase dimerisation domain C1J04_RS03615 PF01546 Peptidase family M20/M25/M40 C1J04_RS03620 PF01979 Amidohydrolase family C1J04_RS03630 PF00005 ABC transporter C1J04_RS03635 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS03640 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS03645 PF09084 NMT1/THI5 like C1J04_RS03650 PF17969 L,D-transpeptidase C-terminal domain C1J04_RS03650 PF03734 L,D-transpeptidase catalytic domain C1J04_RS03655 PF00313 'Cold-shock' DNA-binding domain C1J04_RS03660 PF00072 Response regulator receiver domain C1J04_RS03660 PF00486 Transcriptional regulatory protein, C terminal C1J04_RS03665 PF00005 ABC transporter C1J04_RS03665 PF12848 ABC transporter C1J04_RS03675 PF01235 Sodium:alanine symporter family C1J04_RS03680 PF01467 Cytidylyltransferase-like C1J04_RS03690 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family C1J04_RS03700 PF01921 tRNA synthetases class I (K) C1J04_RS03710 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) C1J04_RS03710 PF12708 Pectate lyase superfamily protein C1J04_RS03710 PF13229 Right handed beta helix region C1J04_RS03740 PF17757 UvrB interaction domain C1J04_RS03740 PF12344 Ultra-violet resistance protein B C1J04_RS03740 PF02151 UvrB/uvrC motif C1J04_RS03740 PF00271 Helicase conserved C-terminal domain C1J04_RS03740 PF04851 Type III restriction enzyme, res subunit C1J04_RS03760 PF12390 Selenocysteine synthase N terminal C1J04_RS03760 PF03841 L-seryl-tRNA selenium transferase C1J04_RS03765 PF09106 Elongation factor SelB, winged helix C1J04_RS03765 PF03144 Elongation factor Tu domain 2 C1J04_RS03765 PF09107 Elongation factor SelB, winged helix C1J04_RS03765 PF00009 Elongation factor Tu GTP binding domain C1J04_RS03790 PF01979 Amidohydrolase family C1J04_RS03795 PF01869 BadF/BadG/BcrA/BcrD ATPase family C1J04_RS03800 PF00920 Dehydratase family C1J04_RS03805 PF01081 KDPG and KHG aldolase C1J04_RS03825 PF08534 Redoxin C1J04_RS03830 PF00206 Lyase C1J04_RS03830 PF14698 Argininosuccinate lyase C-terminal C1J04_RS03845 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C1J04_RS03845 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C1J04_RS03860 PF00005 ABC transporter C1J04_RS03875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1J04_RS03875 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1J04_RS03890 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1J04_RS03890 PF00364 Biotin-requiring enzyme C1J04_RS03890 PF02817 e3 binding domain C1J04_RS03895 PF16078 2-oxoglutarate dehydrogenase N-terminus C1J04_RS03895 PF00676 Dehydrogenase E1 component C1J04_RS03895 PF16870 2-oxoglutarate dehydrogenase C-terminal C1J04_RS03895 PF02779 Transketolase, pyrimidine binding domain C1J04_RS03900 PF00549 CoA-ligase C1J04_RS03900 PF02629 CoA binding domain C1J04_RS03915 PF00549 CoA-ligase C1J04_RS03915 PF08442 ATP-grasp domain C1J04_RS03920 PF01575 MaoC like domain C1J04_RS03935 PF03328 HpcH/HpaI aldolase/citrate lyase family C1J04_RS03945 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C1J04_RS03945 PF00056 lactate/malate dehydrogenase, NAD binding domain C1J04_RS03950 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C1J04_RS03955 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C1J04_RS03960 PF02910 Fumarate reductase flavoprotein C-term C1J04_RS03960 PF00890 FAD binding domain C1J04_RS03975 PF13237 4Fe-4S dicluster domain C1J04_RS03975 PF13085 2Fe-2S iron-sulfur cluster binding domain C1J04_RS03990 PF01048 Phosphorylase superfamily C1J04_RS03995 PF00816 H-NS histone family C1J04_RS04000 PF01642 Methylmalonyl-CoA mutase C1J04_RS04000 PF02310 B12 binding domain C1J04_RS04005 PF01553 Acyltransferase C1J04_RS04010 PF08240 Alcohol dehydrogenase GroES-like domain C1J04_RS04010 PF00107 Zinc-binding dehydrogenase C1J04_RS04015 PF13538 UvrD-like helicase C-terminal domain C1J04_RS04015 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain C1J04_RS04015 PF14490 Helix-hairpin-helix containing domain C1J04_RS04025 PF01925 Sulfite exporter TauE/SafE C1J04_RS04030 PF02653 Branched-chain amino acid transport system / permease component C1J04_RS04035 PF02653 Branched-chain amino acid transport system / permease component C1J04_RS04040 PF00005 ABC transporter C1J04_RS04045 PF02608 ABC transporter substrate-binding protein PnrA-like C1J04_RS04050 PF00583 Acetyltransferase (GNAT) family C1J04_RS04055 PF00814 Glycoprotease family C1J04_RS04060 PF01106 NifU-like domain C1J04_RS04070 PF01063 Amino-transferase class IV C1J04_RS04090 PF03006 Haemolysin-III related C1J04_RS04100 PF18693 TRAM domain C1J04_RS04100 PF00919 Uncharacterized protein family UPF0004 C1J04_RS04100 PF04055 Radical SAM superfamily C1J04_RS04110 PF00291 Pyridoxal-phosphate dependent enzyme C1J04_RS04125 PF00144 Beta-lactamase C1J04_RS04135 PF01195 Peptidyl-tRNA hydrolase C1J04_RS04140 PF14693 Ribosomal protein TL5, C-terminal domain C1J04_RS04140 PF01386 Ribosomal L25p family C1J04_RS04145 PF01070 FMN-dependent dehydrogenase C1J04_RS04150 PF00290 Tryptophan synthase alpha chain C1J04_RS04160 PF06071 Protein of unknown function (DUF933) C1J04_RS04160 PF01926 50S ribosome-binding GTPase C1J04_RS04170 PF00106 short chain dehydrogenase C1J04_RS04175 PF01370 NAD dependent epimerase/dehydratase family C1J04_RS04195 PF01641 SelR domain C1J04_RS04205 PF04408 Helicase associated domain (HA2) C1J04_RS04205 PF08482 ATP-dependent helicase C-terminal C1J04_RS04205 PF00271 Helicase conserved C-terminal domain C1J04_RS04205 PF00270 DEAD/DEAH box helicase C1J04_RS04215 PF02899 Phage integrase, N-terminal SAM-like domain C1J04_RS04215 PF00589 Phage integrase family C1J04_RS04225 PF00923 Transaldolase/Fructose-6-phosphate aldolase C1J04_RS04230 PF17764 3′ DNA-binding domain (3′BD) C1J04_RS04230 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C1J04_RS04230 PF00270 DEAD/DEAH box helicase C1J04_RS04230 PF18074 Primosomal protein N C-terminal domain C1J04_RS04255 PF02075 Crossover junction endodeoxyribonuclease RuvC C1J04_RS04260 PF01330 RuvA N terminal domain C1J04_RS04260 PF07499 RuvA, C-terminal domain C1J04_RS04265 PF17864 RuvB AAA lid domain C1J04_RS04265 PF05491 RuvB C-terminal winged helix domain C1J04_RS04265 PF05496 Holliday junction DNA helicase RuvB P-loop domain C1J04_RS04275 PF03061 Thioesterase superfamily C1J04_RS04280 PF01618 MotA/TolQ/ExbB proton channel family C1J04_RS04285 PF02472 Biopolymer transport protein ExbD/TolR C1J04_RS04300 PF04052 TolB amino-terminal domain C1J04_RS04300 PF07676 WD40-like Beta Propeller Repeat C1J04_RS04305 PF00691 OmpA family C1J04_RS04315 PF01171 PP-loop family C1J04_RS04320 PF17862 AAA+ lid domain C1J04_RS04320 PF06480 FtsH Extracellular C1J04_RS04320 PF00004 ATPase family associated with various cellular activities (AAA) C1J04_RS04320 PF01434 Peptidase family M41 C1J04_RS04330 PF01268 Formate--tetrahydrofolate ligase C1J04_RS04335 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C1J04_RS04335 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C1J04_RS04350 PF08494 DEAD/H associated C1J04_RS04350 PF00271 Helicase conserved C-terminal domain C1J04_RS04350 PF00270 DEAD/DEAH box helicase C1J04_RS04385 PF00437 Type II/IV secretion system protein C1J04_RS04400 PF13629 Pilus formation protein N terminal region C1J04_RS04400 PF04972 BON domain C1J04_RS04400 PF00263 Bacterial type II and III secretion system protein C1J04_RS04420 PF01464 Transglycosylase SLT domain C1J04_RS04425 PF01144 Coenzyme A transferase C1J04_RS04430 PF01144 Coenzyme A transferase C1J04_RS04435 PF03734 L,D-transpeptidase catalytic domain C1J04_RS04440 PF01396 Topoisomerase DNA binding C4 zinc finger C1J04_RS04440 PF01131 DNA topoisomerase C1J04_RS04440 PF01751 Toprim domain C1J04_RS04440 PF13368 Topoisomerase C-terminal repeat C1J04_RS04445 PF02481 DNA recombination-mediator protein A C1J04_RS04445 PF18255 DNA processing protein A sterile alpha motif domain C1J04_RS04450 PF01523 Putative modulator of DNA gyrase C1J04_RS04455 PF02790 Cytochrome C oxidase subunit II, transmembrane domain C1J04_RS04455 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C1J04_RS04460 PF01040 UbiA prenyltransferase family C1J04_RS04470 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 C1J04_RS04475 PF00510 Cytochrome c oxidase subunit III C1J04_RS04480 PF02104 SURF1 family C1J04_RS04485 PF00291 Pyridoxal-phosphate dependent enzyme C1J04_RS04485 PF14821 Threonine synthase N terminus C1J04_RS04490 PF05193 Peptidase M16 inactive domain C1J04_RS04490 PF00675 Insulinase (Peptidase family M16) C1J04_RS04510 PF00202 Aminotransferase class-III C1J04_RS04515 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C1J04_RS04515 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C1J04_RS04525 PF01384 Phosphate transporter family C1J04_RS04535 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain C1J04_RS04535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C1J04_RS04540 PF01416 tRNA pseudouridine synthase C1J04_RS04545 PF04317 YcjX-like family, DUF463 C1J04_RS04555 PF05128 Domain of unknown function (DUF697) C1J04_RS04560 PF00133 tRNA synthetases class I (I, L, M and V) C1J04_RS04560 PF08264 Anticodon-binding domain of tRNA C1J04_RS04565 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C1J04_RS04565 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C1J04_RS04570 PF01066 CDP-alcohol phosphatidyltransferase C1J04_RS04575 PF00830 Ribosomal L28 family C1J04_RS04590 PF02146 Sir2 family C1J04_RS04595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1J04_RS04595 PF03466 LysR substrate binding domain C1J04_RS04600 PF00795 Carbon-nitrogen hydrolase C1J04_RS04605 PF01176 Translation initiation factor 1A / IF-1 C1J04_RS04610 PF02545 Maf-like protein C1J04_RS04620 PF03884 DNA gyrase inhibitor YacG C1J04_RS04635 PF01794 Ferric reductase like transmembrane component C1J04_RS04640 PF05368 NmrA-like family C1J04_RS04655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1J04_RS04655 PF03466 LysR substrate binding domain C1J04_RS04660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1J04_RS04660 PF03466 LysR substrate binding domain C1J04_RS04665 PF08240 Alcohol dehydrogenase GroES-like domain C1J04_RS04665 PF00107 Zinc-binding dehydrogenase C1J04_RS04675 PF00890 FAD binding domain C1J04_RS04675 PF04205 FMN-binding domain C1J04_RS04680 PF07729 FCD domain C1J04_RS04680 PF00392 Bacterial regulatory proteins, gntR family C1J04_RS04690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1J04_RS04690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1J04_RS04700 PF04303 PrpF protein C1J04_RS04715 PF00486 Transcriptional regulatory protein, C terminal C1J04_RS04715 PF00072 Response regulator receiver domain C1J04_RS04720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS04720 PF00672 HAMP domain C1J04_RS04720 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS04735 PF00698 Acyl transferase domain C1J04_RS04735 PF08659 KR domain C1J04_RS04735 PF00550 Phosphopantetheine attachment site C1J04_RS04735 PF14765 Polyketide synthase dehydratase C1J04_RS04735 PF08240 Alcohol dehydrogenase GroES-like domain C1J04_RS04740 PF00378 Enoyl-CoA hydratase/isomerase C1J04_RS04745 PF00676 Dehydrogenase E1 component C1J04_RS04750 PF02780 Transketolase, C-terminal domain C1J04_RS04750 PF02779 Transketolase, pyrimidine binding domain C1J04_RS04760 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1J04_RS04760 PF02817 e3 binding domain C1J04_RS04760 PF00364 Biotin-requiring enzyme C1J04_RS04775 PF02954 Bacterial regulatory protein, Fis family C1J04_RS04775 PF00072 Response regulator receiver domain C1J04_RS04775 PF00158 Sigma-54 interaction domain C1J04_RS04780 PF00106 short chain dehydrogenase C1J04_RS04800 PF02615 Malate/L-lactate dehydrogenase C1J04_RS04820 PF02653 Branched-chain amino acid transport system / permease component C1J04_RS04825 PF02653 Branched-chain amino acid transport system / permease component C1J04_RS04830 PF00005 ABC transporter C1J04_RS04830 PF12399 Branched-chain amino acid ATP-binding cassette transporter C1J04_RS04835 PF00005 ABC transporter C1J04_RS04840 PF00072 Response regulator receiver domain C1J04_RS04840 PF01627 Hpt domain C1J04_RS04840 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS04840 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C1J04_RS04840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS04840 PF00672 HAMP domain C1J04_RS04850 PF04239 Protein of unknown function (DUF421) C1J04_RS04855 PF01070 FMN-dependent dehydrogenase C1J04_RS04865 PF02472 Biopolymer transport protein ExbD/TolR C1J04_RS04870 PF01618 MotA/TolQ/ExbB proton channel family C1J04_RS04875 PF13640 2OG-Fe(II) oxygenase superfamily C1J04_RS04875 PF18331 PKHD-type hydroxylase C-terminal domain C1J04_RS04880 PF07715 TonB-dependent Receptor Plug Domain C1J04_RS04880 PF00593 TonB dependent receptor C1J04_RS04895 PF02028 BCCT, betaine/carnitine/choline family transporter C1J04_RS04905 PF00881 Nitroreductase family C1J04_RS04925 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C1J04_RS04935 PF00815 Histidinol dehydrogenase C1J04_RS04940 PF06793 Uncharacterised protein family (UPF0262) C1J04_RS04955 PF00267 Gram-negative porin C1J04_RS04960 PF06421 GTP-binding protein LepA C-terminus C1J04_RS04960 PF00679 Elongation factor G C-terminus C1J04_RS04960 PF00009 Elongation factor Tu GTP binding domain C1J04_RS04960 PF03144 Elongation factor Tu domain 2 C1J04_RS04970 PF04101 Glycosyltransferase family 28 C-terminal domain C1J04_RS04970 PF03033 Glycosyltransferase family 28 N-terminal domain C1J04_RS04975 PF00300 Histidine phosphatase superfamily (branch 1) C1J04_RS04980 PF13439 Glycosyltransferase Family 4 C1J04_RS04980 PF00534 Glycosyl transferases group 1 C1J04_RS04985 PF00534 Glycosyl transferases group 1 C1J04_RS04995 PF00924 Mechanosensitive ion channel C1J04_RS05005 PF12911 N-terminal TM domain of oligopeptide transport permease C C1J04_RS05005 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS05010 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS05015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1J04_RS05020 PF00005 ABC transporter C1J04_RS05020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1J04_RS05040 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1J04_RS05050 PF00378 Enoyl-CoA hydratase/isomerase C1J04_RS05050 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C1J04_RS05050 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C1J04_RS05055 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS05055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS05055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS05060 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS05060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS05060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS05070 PF00378 Enoyl-CoA hydratase/isomerase C1J04_RS05075 PF00501 AMP-binding enzyme C1J04_RS05075 PF13193 AMP-binding enzyme C-terminal domain C1J04_RS05080 PF00834 Ribulose-phosphate 3 epimerase family C1J04_RS05090 PF00005 ABC transporter C1J04_RS05095 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS05110 PF01022 Bacterial regulatory protein, arsR family C1J04_RS05120 PF02683 Cytochrome C biogenesis protein transmembrane region C1J04_RS05150 PF02872 5'-nucleotidase, C-terminal domain C1J04_RS05150 PF00149 Calcineurin-like phosphoesterase C1J04_RS05160 PF00034 Cytochrome c C1J04_RS05170 PF00753 Metallo-beta-lactamase superfamily C1J04_RS05175 PF00916 Sulfate permease family C1J04_RS05175 PF01740 STAS domain C1J04_RS05180 PF13193 AMP-binding enzyme C-terminal domain C1J04_RS05180 PF00501 AMP-binding enzyme C1J04_RS05185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1J04_RS05185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1J04_RS05190 PF00924 Mechanosensitive ion channel C1J04_RS05200 PF13632 Glycosyl transferase family group 2 C1J04_RS05205 PF04349 Periplasmic glucan biosynthesis protein, MdoG C1J04_RS05210 PF03553 Na+/H+ antiporter family C1J04_RS05215 PF13193 AMP-binding enzyme C-terminal domain C1J04_RS05215 PF00501 AMP-binding enzyme C1J04_RS05220 PF00202 Aminotransferase class-III C1J04_RS05225 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family C1J04_RS05230 PF00557 Metallopeptidase family M24 C1J04_RS05230 PF01321 Creatinase/Prolidase N-terminal domain C1J04_RS05235 PF01037 Lrp/AsnC ligand binding domain C1J04_RS05245 PF06745 KaiC C1J04_RS05250 PF08447 PAS fold C1J04_RS05250 PF07536 HWE histidine kinase C1J04_RS05250 PF13426 PAS domain C1J04_RS05255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS05255 PF13426 PAS domain C1J04_RS05255 PF00072 Response regulator receiver domain C1J04_RS05285 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C1J04_RS05285 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C1J04_RS05290 PF03450 CO dehydrogenase flavoprotein C-terminal domain C1J04_RS05290 PF00941 FAD binding domain in molybdopterin dehydrogenase C1J04_RS05295 PF10518 TAT (twin-arginine translocation) pathway signal sequence C1J04_RS05295 PF00111 2Fe-2S iron-sulfur cluster binding domain C1J04_RS05295 PF01799 [2Fe-2S] binding domain C1J04_RS05300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1J04_RS05300 PF03466 LysR substrate binding domain C1J04_RS05325 PF01979 Amidohydrolase family C1J04_RS05340 PF00005 ABC transporter C1J04_RS05355 PF00005 ABC transporter C1J04_RS05355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1J04_RS05360 PF00005 ABC transporter C1J04_RS05360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1J04_RS05365 PF12911 N-terminal TM domain of oligopeptide transport permease C C1J04_RS05365 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS05370 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS05375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1J04_RS05380 PF07729 FCD domain C1J04_RS05380 PF00392 Bacterial regulatory proteins, gntR family C1J04_RS05385 PF01695 IstB-like ATP binding protein C1J04_RS05390 PF00665 Integrase core domain C1J04_RS05435 PF01906 Putative heavy-metal-binding C1J04_RS05520 PF11638 DnaA N-terminal domain C1J04_RS05520 PF08299 Bacterial dnaA protein helix-turn-helix C1J04_RS05520 PF00308 Bacterial dnaA protein C1J04_RS05590 PF03237 Terminase-like family C1J04_RS05605 PF04233 Phage Mu protein F like protein C1J04_RS05630 PF10124 Mu-like prophage major head subunit gpT C1J04_RS05715 PF14765 Polyketide synthase dehydratase C1J04_RS05715 PF00550 Phosphopantetheine attachment site C1J04_RS05715 PF08659 KR domain C1J04_RS05715 PF02801 Beta-ketoacyl synthase, C-terminal domain C1J04_RS05715 PF00109 Beta-ketoacyl synthase, N-terminal domain C1J04_RS05715 PF00107 Zinc-binding dehydrogenase C1J04_RS05715 PF16197 Ketoacyl-synthetase C-terminal extension C1J04_RS05715 PF08240 Alcohol dehydrogenase GroES-like domain C1J04_RS05715 PF00698 Acyl transferase domain C1J04_RS05725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1J04_RS05725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1J04_RS05735 PF01565 FAD binding domain C1J04_RS05735 PF02913 FAD linked oxidases, C-terminal domain C1J04_RS05740 PF16350 FAD dependent oxidoreductase central domain C1J04_RS05740 PF01571 Aminomethyltransferase folate-binding domain C1J04_RS05740 PF01266 FAD dependent oxidoreductase C1J04_RS05740 PF08669 Glycine cleavage T-protein C-terminal barrel domain C1J04_RS05750 PF01183 Glycosyl hydrolases family 25 C1J04_RS05760 PF01266 FAD dependent oxidoreductase C1J04_RS05765 PF02798 Glutathione S-transferase, N-terminal domain C1J04_RS05780 PF02608 ABC transporter substrate-binding protein PnrA-like C1J04_RS05785 PF02653 Branched-chain amino acid transport system / permease component C1J04_RS05790 PF02653 Branched-chain amino acid transport system / permease component C1J04_RS05795 PF00005 ABC transporter C1J04_RS05805 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C1J04_RS05805 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C1J04_RS05810 PF01799 [2Fe-2S] binding domain C1J04_RS05810 PF00111 2Fe-2S iron-sulfur cluster binding domain C1J04_RS05815 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C1J04_RS05815 PF14579 Helix-hairpin-helix motif C1J04_RS05815 PF07733 Bacterial DNA polymerase III alpha NTPase domain C1J04_RS05815 PF02811 PHP domain C1J04_RS05820 PF04102 SlyX C1J04_RS05825 PF03129 Anticodon binding domain C1J04_RS05825 PF13393 Histidyl-tRNA synthetase C1J04_RS05830 PF13393 Histidyl-tRNA synthetase C1J04_RS05835 PF01634 ATP phosphoribosyltransferase C1J04_RS05845 PF03477 ATP cone domain C1J04_RS05845 PF02867 Ribonucleotide reductase, barrel domain C1J04_RS05845 PF00317 Ribonucleotide reductase, all-alpha domain C1J04_RS05850 PF00004 ATPase family associated with various cellular activities (AAA) C1J04_RS05850 PF02190 ATP-dependent protease La (LON) substrate-binding domain C1J04_RS05850 PF05362 Lon protease (S16) C-terminal proteolytic domain C1J04_RS05875 PF13005 zinc-finger binding domain of transposase IS66 C1J04_RS05875 PF03050 Transposase IS66 family C1J04_RS05875 PF13007 Transposase C of IS166 homeodomain C1J04_RS05875 PF13817 IS66 C-terminal element C1J04_RS05920 PF00176 SNF2 family N-terminal domain C1J04_RS05920 PF18339 RapA N-terminal Tudor like domain 1 C1J04_RS05920 PF18337 RapA N-terminal Tudor like domain C1J04_RS05920 PF12137 RNA polymerase recycling family C-terminal C1J04_RS05920 PF00271 Helicase conserved C-terminal domain C1J04_RS05935 PF13361 UvrD-like helicase C-terminal domain C1J04_RS05935 PF00580 UvrD/REP helicase N-terminal domain C1J04_RS05935 PF12705 PD-(D/E)XK nuclease superfamily C1J04_RS05970 PF05717 IS66 Orf2 like protein C1J04_RS05980 PF00665 Integrase core domain C1J04_RS05985 PF01695 IstB-like ATP binding protein C1J04_RS05990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1J04_RS05995 PF07729 FCD domain C1J04_RS05995 PF00392 Bacterial regulatory proteins, gntR family C1J04_RS06000 PF01613 Flavin reductase like domain C1J04_RS06010 PF00589 Phage integrase family C1J04_RS06010 PF02899 Phage integrase, N-terminal SAM-like domain C1J04_RS06015 PF01116 Fructose-bisphosphate aldolase class-II C1J04_RS06020 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C1J04_RS06025 PF01261 Xylose isomerase-like TIM barrel C1J04_RS06030 PF00596 Class II Aldolase and Adducin N-terminal domain C1J04_RS06035 PF17042 Nucleotide-binding C-terminal domain C1J04_RS06035 PF07005 Sugar-binding N-terminal domain C1J04_RS06040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C1J04_RS06040 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C1J04_RS06045 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1J04_RS06050 PF03480 Bacterial extracellular solute-binding protein, family 7 C1J04_RS06055 PF00356 Bacterial regulatory proteins, lacI family C1J04_RS06055 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C1J04_RS06075 PF00202 Aminotransferase class-III C1J04_RS06085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1J04_RS06085 PF03466 LysR substrate binding domain C1J04_RS06100 PF01758 Sodium Bile acid symporter family C1J04_RS06105 PF03960 ArsC family C1J04_RS06110 PF03358 NADPH-dependent FMN reductase C1J04_RS06120 PF05971 RNA methyltransferase C1J04_RS06135 PF17912 MalK OB fold domain C1J04_RS06135 PF00005 ABC transporter C1J04_RS06150 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS06155 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS06160 PF16874 Glycosyl hydrolase family 36 C-terminal domain C1J04_RS06160 PF16875 Glycosyl hydrolase family 36 N-terminal domain C1J04_RS06165 PF00920 Dehydratase family C1J04_RS06175 PF05035 2-keto-3-deoxy-galactonokinase C1J04_RS06180 PF01081 KDPG and KHG aldolase C1J04_RS06185 PF08450 SMP-30/Gluconolactonase/LRE-like region C1J04_RS06190 PF08533 Beta-galactosidase C-terminal domain C1J04_RS06190 PF02449 Beta-galactosidase C1J04_RS06190 PF08532 Beta-galactosidase trimerisation domain C1J04_RS06195 PF03180 NLPA lipoprotein C1J04_RS06200 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS06205 PF00005 ABC transporter C1J04_RS06205 PF09383 NIL domain C1J04_RS06210 PF00111 2Fe-2S iron-sulfur cluster binding domain C1J04_RS06220 PF01037 Lrp/AsnC ligand binding domain C1J04_RS06230 PF00155 Aminotransferase class I and II C1J04_RS06245 PF03435 Saccharopine dehydrogenase NADP binding domain C1J04_RS06250 PF01235 Sodium:alanine symporter family C1J04_RS06255 PF00710 Asparaginase, N-terminal C1J04_RS06255 PF17763 Glutaminase/Asparaginase C-terminal domain C1J04_RS06280 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment C1J04_RS06285 PF03480 Bacterial extracellular solute-binding protein, family 7 C1J04_RS06295 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1J04_RS06300 PF01425 Amidase C1J04_RS06305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1J04_RS06305 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1J04_RS06315 PF03301 Tryptophan 2,3-dioxygenase C1J04_RS06320 PF00266 Aminotransferase class-V C1J04_RS06325 PF13545 Crp-like helix-turn-helix domain C1J04_RS06325 PF00027 Cyclic nucleotide-binding domain C1J04_RS06335 PF03466 LysR substrate binding domain C1J04_RS06335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1J04_RS06365 PF03186 CobD/Cbib protein C1J04_RS06370 PF00155 Aminotransferase class I and II C1J04_RS06380 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP C1J04_RS06385 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase C1J04_RS06390 PF02277 Phosphoribosyltransferase C1J04_RS06395 PF02654 Cobalamin-5-phosphate synthase C1J04_RS06410 PF13406 Transglycosylase SLT domain C1J04_RS06415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1J04_RS06415 PF03466 LysR substrate binding domain C1J04_RS06420 PF00141 Peroxidase C1J04_RS06455 PF05853 beta-keto acid cleavage enzyme C1J04_RS06460 PF00775 Dioxygenase C1J04_RS06465 PF00775 Dioxygenase C1J04_RS06465 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal C1J04_RS06480 PF08240 Alcohol dehydrogenase GroES-like domain C1J04_RS06480 PF00107 Zinc-binding dehydrogenase C1J04_RS06485 PF01799 [2Fe-2S] binding domain C1J04_RS06485 PF00111 2Fe-2S iron-sulfur cluster binding domain C1J04_RS06490 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C1J04_RS06490 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C1J04_RS06490 PF00034 Cytochrome c C1J04_RS06500 PF00501 AMP-binding enzyme C1J04_RS06500 PF13193 AMP-binding enzyme C-terminal domain C1J04_RS06510 PF00664 ABC transporter transmembrane region C1J04_RS06510 PF00005 ABC transporter C1J04_RS06515 PF04972 BON domain C1J04_RS06515 PF01476 LysM domain C1J04_RS06520 PF13193 AMP-binding enzyme C-terminal domain C1J04_RS06520 PF00501 AMP-binding enzyme C1J04_RS06525 PF07859 alpha/beta hydrolase fold C1J04_RS06535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1J04_RS06535 PF00005 ABC transporter C1J04_RS06540 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS06540 PF12911 N-terminal TM domain of oligopeptide transport permease C C1J04_RS06545 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS06550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1J04_RS06555 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain C1J04_RS06555 PF02129 X-Pro dipeptidyl-peptidase (S15 family) C1J04_RS06570 PF00664 ABC transporter transmembrane region C1J04_RS06570 PF00005 ABC transporter C1J04_RS06575 PF00529 HlyD membrane-fusion protein of T1SS C1J04_RS06580 PF02580 D-Tyr-tRNA(Tyr) deacylase C1J04_RS06610 PF05816 Toxic anion resistance protein (TelA) C1J04_RS06625 PF01479 S4 domain C1J04_RS06625 PF00849 RNA pseudouridylate synthase C1J04_RS06630 PF14437 MafB19-like deaminase C1J04_RS06650 PF02686 Glu-tRNAGln amidotransferase C subunit C1J04_RS06655 PF01425 Amidase C1J04_RS06665 PF01510 N-acetylmuramoyl-L-alanine amidase C1J04_RS06675 PF00471 Ribosomal protein L33 C1J04_RS06685 PF01027 Inhibitor of apoptosis-promoting Bax1 C1J04_RS06690 PF01381 Helix-turn-helix C1J04_RS06695 PF00459 Inositol monophosphatase family C1J04_RS06700 PF01979 Amidohydrolase family C1J04_RS06710 PF01979 Amidohydrolase family C1J04_RS06715 PF00571 CBS domain C1J04_RS06715 PF01769 Divalent cation transporter C1J04_RS06715 PF03448 MgtE intracellular N domain C1J04_RS06720 PF01812 5-formyltetrahydrofolate cyclo-ligase family C1J04_RS06725 PF13277 YmdB-like protein C1J04_RS06730 PF03600 Citrate transporter C1J04_RS06730 PF02080 TrkA-C domain C1J04_RS06735 PF02080 TrkA-C domain C1J04_RS06735 PF03600 Citrate transporter C1J04_RS06740 PF01709 Transcriptional regulator C1J04_RS06750 PF01810 LysE type translocator C1J04_RS06760 PF00440 Bacterial regulatory proteins, tetR family C1J04_RS06760 PF13977 BetI-type transcriptional repressor, C-terminal C1J04_RS06765 PF00884 Sulfatase C1J04_RS06765 PF12411 Choline sulfatase enzyme C terminal C1J04_RS06775 PF00171 Aldehyde dehydrogenase family C1J04_RS06780 PF00732 GMC oxidoreductase C1J04_RS06780 PF05199 GMC oxidoreductase C1J04_RS06790 PF01381 Helix-turn-helix C1J04_RS06790 PF09856 Predicted transcriptional regulator (DUF2083) C1J04_RS06790 PF06114 IrrE N-terminal-like domain C1J04_RS06795 PF07690 Major Facilitator Superfamily C1J04_RS06800 PF01039 Carboxyl transferase domain C1J04_RS06820 PF02785 Biotin carboxylase C-terminal domain C1J04_RS06820 PF00289 Biotin carboxylase, N-terminal domain C1J04_RS06820 PF00364 Biotin-requiring enzyme C1J04_RS06820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1J04_RS06820 PF18140 Propionyl-coenzyme A carboxylase BT domain C1J04_RS06835 PF02310 B12 binding domain C1J04_RS06835 PF01642 Methylmalonyl-CoA mutase C1J04_RS06850 PF05099 Tellurite resistance protein TerB C1J04_RS06850 PF00226 DnaJ domain C1J04_RS06865 PF02541 Ppx/GppA phosphatase family C1J04_RS06870 PF17941 Polyphosphate kinase C-terminal domain 1 C1J04_RS06870 PF13090 Polyphosphate kinase C-terminal domain 2 C1J04_RS06870 PF13089 Polyphosphate kinase N-terminal domain C1J04_RS06870 PF02503 Polyphosphate kinase middle domain C1J04_RS06880 PF01594 AI-2E family transporter C1J04_RS06885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1J04_RS06885 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1J04_RS06890 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1J04_RS06890 PF03129 Anticodon binding domain C1J04_RS06900 PF12704 MacB-like periplasmic core domain C1J04_RS06900 PF02687 FtsX-like permease family C1J04_RS06905 PF00005 ABC transporter C1J04_RS06935 PF01751 Toprim domain C1J04_RS06935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS06935 PF00986 DNA gyrase B subunit, carboxyl terminus C1J04_RS06935 PF00204 DNA gyrase B C1J04_RS06940 PF16867 Dimethlysulfonioproprionate lyase C1J04_RS06945 PF00561 alpha/beta hydrolase fold C1J04_RS06955 PF01554 MatE C1J04_RS06965 PF00155 Aminotransferase class I and II C1J04_RS06970 PF01381 Helix-turn-helix C1J04_RS06995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1J04_RS07010 PF02511 Thymidylate synthase complementing protein C1J04_RS07030 PF00313 'Cold-shock' DNA-binding domain C1J04_RS07035 PF03960 ArsC family C1J04_RS07050 PF05114 Protein of unknown function (DUF692) C1J04_RS07060 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C1J04_RS07060 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1J04_RS07060 PF03129 Anticodon binding domain C1J04_RS07060 PF02824 TGS domain C1J04_RS07100 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus C1J04_RS07100 PF00561 alpha/beta hydrolase fold C1J04_RS07115 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C1J04_RS07120 PF01266 FAD dependent oxidoreductase C1J04_RS07125 PF00120 Glutamine synthetase, catalytic domain C1J04_RS07130 PF00117 Glutamine amidotransferase class-I C1J04_RS07130 PF00958 GMP synthase C terminal domain C1J04_RS07135 PF00120 Glutamine synthetase, catalytic domain C1J04_RS07140 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS07145 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS07150 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1J04_RS07155 PF00005 ABC transporter C1J04_RS07175 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ C1J04_RS07180 PF06418 CTP synthase N-terminus C1J04_RS07180 PF00117 Glutamine amidotransferase class-I C1J04_RS07205 PF00709 Adenylosuccinate synthetase C1J04_RS07230 PF00990 Diguanylate cyclase, GGDEF domain C1J04_RS07240 PF13419 Haloacid dehalogenase-like hydrolase C1J04_RS07250 PF03707 Bacterial signalling protein N terminal repeat C1J04_RS07250 PF00990 Diguanylate cyclase, GGDEF domain C1J04_RS07250 PF00563 EAL domain C1J04_RS07255 PF00128 Alpha amylase, catalytic domain C1J04_RS07270 PF01381 Helix-turn-helix C1J04_RS07275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1J04_RS07280 PF00557 Metallopeptidase family M24 C1J04_RS07280 PF01321 Creatinase/Prolidase N-terminal domain C1J04_RS07285 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS07290 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS07290 PF12911 N-terminal TM domain of oligopeptide transport permease C C1J04_RS07295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1J04_RS07295 PF00005 ABC transporter C1J04_RS07300 PF00005 ABC transporter C1J04_RS07300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1J04_RS07310 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C1J04_RS07315 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS07320 PF00005 ABC transporter C1J04_RS07320 PF00571 CBS domain C1J04_RS07325 PF00892 EamA-like transporter family C1J04_RS07330 PF02548 Ketopantoate hydroxymethyltransferase C1J04_RS07335 PF02569 Pantoate-beta-alanine ligase C1J04_RS07340 PF06628 Catalase-related immune-responsive C1J04_RS07340 PF00199 Catalase C1J04_RS07345 PF00005 ABC transporter C1J04_RS07350 PF01032 FecCD transport family C1J04_RS07365 PF00106 short chain dehydrogenase C1J04_RS07370 PF06445 GyrI-like small molecule binding domain C1J04_RS07370 PF12833 Helix-turn-helix domain C1J04_RS07385 PF01368 DHH family C1J04_RS07385 PF02272 DHHA1 domain C1J04_RS07385 PF17768 RecJ OB domain C1J04_RS07390 PF00742 Homoserine dehydrogenase C1J04_RS07390 PF01842 ACT domain C1J04_RS07390 PF03447 Homoserine dehydrogenase, NAD binding domain C1J04_RS07405 PF00881 Nitroreductase family C1J04_RS07410 PF03313 Serine dehydratase alpha chain C1J04_RS07410 PF03315 Serine dehydratase beta chain C1J04_RS07415 PF02798 Glutathione S-transferase, N-terminal domain C1J04_RS07420 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C1J04_RS07425 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1J04_RS07425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1J04_RS07430 PF01145 SPFH domain / Band 7 family C1J04_RS07435 PF01145 SPFH domain / Band 7 family C1J04_RS07440 PF13180 PDZ domain C1J04_RS07445 PF00440 Bacterial regulatory proteins, tetR family C1J04_RS07450 PF01475 Ferric uptake regulator family C1J04_RS07455 PF01297 Zinc-uptake complex component A periplasmic C1J04_RS07460 PF00005 ABC transporter C1J04_RS07465 PF00950 ABC 3 transport family C1J04_RS07470 PF00950 ABC 3 transport family C1J04_RS07475 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS07485 PF08220 DeoR-like helix-turn-helix domain C1J04_RS07485 PF00455 DeoR C terminal sensor domain C1J04_RS07490 PF16901 C-terminal domain of alpha-glycerophosphate oxidase C1J04_RS07490 PF01266 FAD dependent oxidoreductase C1J04_RS07495 PF03459 TOBE domain C1J04_RS07495 PF17912 MalK OB fold domain C1J04_RS07495 PF00005 ABC transporter C1J04_RS07500 PF00005 ABC transporter C1J04_RS07505 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS07510 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS07525 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C1J04_RS07525 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C1J04_RS07530 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C1J04_RS07535 PF00465 Iron-containing alcohol dehydrogenase C1J04_RS07540 PF01925 Sulfite exporter TauE/SafE C1J04_RS07545 PF01207 Dihydrouridine synthase (Dus) C1J04_RS07560 PF03652 Holliday junction resolvase C1J04_RS07570 PF01266 FAD dependent oxidoreductase C1J04_RS07580 PF04267 Sarcosine oxidase, delta subunit family C1J04_RS07585 PF08669 Glycine cleavage T-protein C-terminal barrel domain C1J04_RS07585 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1J04_RS07585 PF17806 Sarcosine oxidase A3 domain C1J04_RS07585 PF01571 Aminomethyltransferase folate-binding domain C1J04_RS07595 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C1J04_RS07595 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C1J04_RS07610 PF03641 Possible lysine decarboxylase C1J04_RS07620 PF00664 ABC transporter transmembrane region C1J04_RS07620 PF00005 ABC transporter C1J04_RS07630 PF07690 Major Facilitator Superfamily C1J04_RS07635 PF00873 AcrB/AcrD/AcrF family C1J04_RS07655 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C1J04_RS07655 PF01926 50S ribosome-binding GTPase C1J04_RS07665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1J04_RS07665 PF02403 Seryl-tRNA synthetase N-terminal domain C1J04_RS07670 PF02699 Preprotein translocase subunit C1J04_RS07675 PF02355 Protein export membrane protein C1J04_RS07680 PF02355 Protein export membrane protein C1J04_RS07680 PF07549 SecD/SecF GG Motif C1J04_RS07685 PF04430 Protein of unknown function (DUF498/DUF598) C1J04_RS07690 PF00005 ABC transporter C1J04_RS07695 PF03379 CcmB protein C1J04_RS07700 PF01578 Cytochrome C assembly protein C1J04_RS07705 PF04995 Heme exporter protein D (CcmD) C1J04_RS07710 PF08534 Redoxin C1J04_RS07730 PF00120 Glutamine synthetase, catalytic domain C1J04_RS07730 PF03951 Glutamine synthetase, beta-Grasp domain C1J04_RS07735 PF00543 Nitrogen regulatory protein P-II C1J04_RS07740 PF03853 YjeF-related protein N-terminus C1J04_RS07740 PF01256 Carbohydrate kinase C1J04_RS07745 PF05698 Bacterial trigger factor protein (TF) C-terminus C1J04_RS07745 PF05697 Bacterial trigger factor protein (TF) C1J04_RS07760 PF09924 Uncharacterised conserved protein (DUF2156) C1J04_RS07760 PF03706 Lysylphosphatidylglycerol synthase TM region C1J04_RS07765 PF09335 SNARE associated Golgi protein C1J04_RS07770 PF01544 CorA-like Mg2+ transporter protein C1J04_RS07775 PF05552 Conserved TM helix C1J04_RS07775 PF00924 Mechanosensitive ion channel C1J04_RS07795 PF00072 Response regulator receiver domain C1J04_RS07795 PF00486 Transcriptional regulatory protein, C terminal C1J04_RS07800 PF07689 KaiB domain C1J04_RS07800 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS07800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS07815 PF00665 Integrase core domain C1J04_RS07820 PF01695 IstB-like ATP binding protein C1J04_RS07830 PF03471 Transporter associated domain C1J04_RS07830 PF00999 Sodium/hydrogen exchanger family C1J04_RS07835 PF00144 Beta-lactamase C1J04_RS07850 PF12706 Beta-lactamase superfamily domain C1J04_RS07855 PF01026 TatD related DNase C1J04_RS07860 PF09115 DNA polymerase III, delta subunit, C terminal C1J04_RS07865 PF02223 Thymidylate kinase C1J04_RS07870 PF07943 Penicillin-binding protein 5, C-terminal domain C1J04_RS07870 PF00768 D-alanyl-D-alanine carboxypeptidase C1J04_RS07890 PF01571 Aminomethyltransferase folate-binding domain C1J04_RS07890 PF08669 Glycine cleavage T-protein C-terminal barrel domain C1J04_RS07910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS07910 PF00989 PAS fold C1J04_RS07910 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS07915 PF08220 DeoR-like helix-turn-helix domain C1J04_RS07915 PF00455 DeoR C terminal sensor domain C1J04_RS07925 PF00005 ABC transporter C1J04_RS07930 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS07935 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS07940 PF13419 Haloacid dehalogenase-like hydrolase C1J04_RS07955 PF01618 MotA/TolQ/ExbB proton channel family C1J04_RS07970 PF03544 Gram-negative bacterial TonB protein C-terminal C1J04_RS07975 PF01627 Hpt domain C1J04_RS07975 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS07975 PF00672 HAMP domain C1J04_RS07975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS07975 PF00072 Response regulator receiver domain C1J04_RS07975 PF17149 Periplasmic sensor domain found in signal transduction proteins C1J04_RS07980 PF00950 ABC 3 transport family C1J04_RS07985 PF00005 ABC transporter C1J04_RS07995 PF01297 Zinc-uptake complex component A periplasmic C1J04_RS08015 PF00574 Clp protease C1J04_RS08020 PF06689 ClpX C4-type zinc finger C1J04_RS08020 PF07724 AAA domain (Cdc48 subfamily) C1J04_RS08020 PF10431 C-terminal, D2-small domain, of ClpB protein C1J04_RS08040 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C1J04_RS08045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1J04_RS08045 PF02785 Biotin carboxylase C-terminal domain C1J04_RS08045 PF00289 Biotin carboxylase, N-terminal domain C1J04_RS08050 PF00364 Biotin-requiring enzyme C1J04_RS08055 PF00005 ABC transporter C1J04_RS08060 PF00005 ABC transporter C1J04_RS08060 PF12399 Branched-chain amino acid ATP-binding cassette transporter C1J04_RS08070 PF02653 Branched-chain amino acid transport system / permease component C1J04_RS08080 PF06114 IrrE N-terminal-like domain C1J04_RS08080 PF09856 Predicted transcriptional regulator (DUF2083) C1J04_RS08080 PF01381 Helix-turn-helix C1J04_RS08085 PF00486 Transcriptional regulatory protein, C terminal C1J04_RS08085 PF00072 Response regulator receiver domain C1J04_RS08095 PF00672 HAMP domain C1J04_RS08095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS08095 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS08095 PF13426 PAS domain C1J04_RS08110 PF04143 Sulphur transport C1J04_RS08120 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) C1J04_RS08125 PF05698 Bacterial trigger factor protein (TF) C-terminus C1J04_RS08125 PF05697 Bacterial trigger factor protein (TF) C1J04_RS08125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1J04_RS08140 PF01281 Ribosomal protein L9, N-terminal domain C1J04_RS08140 PF03948 Ribosomal protein L9, C-terminal domain C1J04_RS08145 PF01084 Ribosomal protein S18 C1J04_RS08150 PF01250 Ribosomal protein S6 C1J04_RS08160 PF04264 YceI-like domain C1J04_RS08165 PF01292 Prokaryotic cytochrome b561 C1J04_RS08170 PF00698 Acyl transferase domain C1J04_RS08180 PF00550 Phosphopantetheine attachment site C1J04_RS08190 PF00109 Beta-ketoacyl synthase, N-terminal domain C1J04_RS08190 PF02801 Beta-ketoacyl synthase, C-terminal domain C1J04_RS08195 PF02618 YceG-like family C1J04_RS08210 PF04860 Phage portal protein C1J04_RS08285 PF00132 Bacterial transferase hexapeptide (six repeats) C1J04_RS08285 PF06426 Serine acetyltransferase, N-terminal C1J04_RS08290 PF02817 e3 binding domain C1J04_RS08290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1J04_RS08290 PF00364 Biotin-requiring enzyme C1J04_RS08295 PF02779 Transketolase, pyrimidine binding domain C1J04_RS08295 PF02780 Transketolase, C-terminal domain C1J04_RS08295 PF00364 Biotin-requiring enzyme C1J04_RS08300 PF00676 Dehydrogenase E1 component C1J04_RS08310 PF00162 Phosphoglycerate kinase C1J04_RS08315 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C1J04_RS08320 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C1J04_RS08330 PF01551 Peptidase family M23 C1J04_RS08335 PF04305 Protein of unknown function (DUF455) C1J04_RS08340 PF00578 AhpC/TSA family C1J04_RS08350 PF02547 Queuosine biosynthesis protein C1J04_RS08355 PF07690 Major Facilitator Superfamily C1J04_RS08365 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1J04_RS08365 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1J04_RS08370 PF17755 UvrA DNA-binding domain C1J04_RS08370 PF00005 ABC transporter C1J04_RS08370 PF17760 UvrA interaction domain C1J04_RS08380 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C1J04_RS08380 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C1J04_RS08390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS08390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS08390 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS08395 PF00171 Aldehyde dehydrogenase family C1J04_RS08410 PF01467 Cytidylyltransferase-like C1J04_RS08415 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C1J04_RS08415 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C1J04_RS08420 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C1J04_RS08420 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C1J04_RS08425 PF05661 Protein of unknown function (DUF808) C1J04_RS08435 PF02780 Transketolase, C-terminal domain C1J04_RS08435 PF02779 Transketolase, pyrimidine binding domain C1J04_RS08435 PF00456 Transketolase, thiamine diphosphate binding domain C1J04_RS08455 PF00462 Glutaredoxin C1J04_RS08470 PF02625 XdhC and CoxI family C1J04_RS08470 PF13478 XdhC Rossmann domain C1J04_RS08480 PF00111 2Fe-2S iron-sulfur cluster binding domain C1J04_RS08480 PF01799 [2Fe-2S] binding domain C1J04_RS08485 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C1J04_RS08485 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C1J04_RS08490 PF00941 FAD binding domain in molybdopterin dehydrogenase C1J04_RS08490 PF03450 CO dehydrogenase flavoprotein C-terminal domain C1J04_RS08495 PF00691 OmpA family C1J04_RS08500 PF00707 Translation initiation factor IF-3, C-terminal domain C1J04_RS08500 PF05198 Translation initiation factor IF-3, N-terminal domain C1J04_RS08510 PF00970 Oxidoreductase FAD-binding domain C1J04_RS08510 PF00175 Oxidoreductase NAD-binding domain C1J04_RS08520 PF01507 Phosphoadenosine phosphosulfate reductase family C1J04_RS08525 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C1J04_RS08525 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C1J04_RS08540 PF01037 Lrp/AsnC ligand binding domain C1J04_RS08545 PF00067 Cytochrome P450 C1J04_RS08550 PF02743 Cache domain C1J04_RS08550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS08550 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS08555 PF00158 Sigma-54 interaction domain C1J04_RS08555 PF02954 Bacterial regulatory protein, Fis family C1J04_RS08555 PF00072 Response regulator receiver domain C1J04_RS08560 PF03480 Bacterial extracellular solute-binding protein, family 7 C1J04_RS08565 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component C1J04_RS08570 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1J04_RS08575 PF00121 Triosephosphate isomerase C1J04_RS08580 PF01521 Iron-sulphur cluster biosynthesis C1J04_RS08590 PF01883 Iron-sulfur cluster assembly protein C1J04_RS08595 PF18030 RimK PreATP-grasp domain C1J04_RS08595 PF08443 RimK-like ATP-grasp domain C1J04_RS08600 PF01702 Queuine tRNA-ribosyltransferase C1J04_RS08605 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C1J04_RS08610 PF05362 Lon protease (S16) C-terminal proteolytic domain C1J04_RS08610 PF00004 ATPase family associated with various cellular activities (AAA) C1J04_RS08610 PF02190 ATP-dependent protease La (LON) substrate-binding domain C1J04_RS08615 PF00216 Bacterial DNA-binding protein C1J04_RS08625 PF00378 Enoyl-CoA hydratase/isomerase C1J04_RS08630 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS08635 PF00005 ABC transporter C1J04_RS08640 PF03070 TENA/THI-4/PQQC family C1J04_RS08645 PF09084 NMT1/THI5 like C1J04_RS08650 PF00899 ThiF family C1J04_RS08655 PF02581 Thiamine monophosphate synthase C1J04_RS08660 PF05690 Thiazole biosynthesis protein ThiG C1J04_RS08670 PF01266 FAD dependent oxidoreductase C1J04_RS08675 PF08543 Phosphomethylpyrimidine kinase C1J04_RS08695 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C1J04_RS08695 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C1J04_RS08710 PF06968 Biotin and Thiamin Synthesis associated domain C1J04_RS08710 PF04055 Radical SAM superfamily C1J04_RS08715 PF02632 BioY family C1J04_RS08725 PF03824 High-affinity nickel-transport protein C1J04_RS08735 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS08740 PF00005 ABC transporter C1J04_RS08745 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS08750 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C1J04_RS08755 PF00144 Beta-lactamase C1J04_RS08760 PF01546 Peptidase family M20/M25/M40 C1J04_RS08760 PF07687 Peptidase dimerisation domain C1J04_RS08765 PF01965 DJ-1/PfpI family C1J04_RS08780 PF07152 YaeQ protein C1J04_RS08785 PF01799 [2Fe-2S] binding domain C1J04_RS08785 PF00111 2Fe-2S iron-sulfur cluster binding domain C1J04_RS08790 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C1J04_RS08800 PF01695 IstB-like ATP binding protein C1J04_RS08805 PF00665 Integrase core domain C1J04_RS08820 PF13007 Transposase C of IS166 homeodomain C1J04_RS08820 PF13005 zinc-finger binding domain of transposase IS66 C1J04_RS08820 PF13817 IS66 C-terminal element C1J04_RS08820 PF03050 Transposase IS66 family C1J04_RS08825 PF05717 IS66 Orf2 like protein C1J04_RS08850 PF02796 Helix-turn-helix domain of resolvase C1J04_RS08850 PF00239 Resolvase, N terminal domain C1J04_RS08895 PF00672 HAMP domain C1J04_RS08895 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS08895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS08915 PF00571 CBS domain C1J04_RS08915 PF00478 IMP dehydrogenase / GMP reductase domain C1J04_RS08920 PF01189 16S rRNA methyltransferase RsmB/F C1J04_RS08920 PF01029 NusB family C1J04_RS08925 PF00072 Response regulator receiver domain C1J04_RS08925 PF13188 PAS domain C1J04_RS08925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS08925 PF08448 PAS fold C1J04_RS08925 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS08935 PF00154 recA bacterial DNA recombination protein C1J04_RS08940 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C1J04_RS08940 PF01411 tRNA synthetases class II (A) C1J04_RS08940 PF02272 DHHA1 domain C1J04_RS08950 PF03144 Elongation factor Tu domain 2 C1J04_RS08950 PF00679 Elongation factor G C-terminus C1J04_RS08950 PF00009 Elongation factor Tu GTP binding domain C1J04_RS08955 PF00924 Mechanosensitive ion channel C1J04_RS08960 PF00893 Small Multidrug Resistance protein C1J04_RS08970 PF00180 Isocitrate/isopropylmalate dehydrogenase C1J04_RS08985 PF02129 X-Pro dipeptidyl-peptidase (S15 family) C1J04_RS08990 PF02082 Transcriptional regulator C1J04_RS08995 PF00266 Aminotransferase class-V C1J04_RS09000 PF01458 Uncharacterized protein family (UPF0051) C1J04_RS09015 PF00005 ABC transporter C1J04_RS09020 PF01458 Uncharacterized protein family (UPF0051) C1J04_RS09035 PF00266 Aminotransferase class-V C1J04_RS09045 PF00072 Response regulator receiver domain C1J04_RS09045 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1J04_RS09045 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS09045 PF01627 Hpt domain C1J04_RS09045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS09055 PF02219 Methylenetetrahydrofolate reductase C1J04_RS09065 PF02541 Ppx/GppA phosphatase family C1J04_RS09070 PF01728 FtsJ-like methyltransferase C1J04_RS09075 PF00361 Proton-conducting membrane transporter C1J04_RS09075 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter C1J04_RS09075 PF13244 Domain of unknown function (DUF4040) C1J04_RS09075 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C1J04_RS09080 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C1J04_RS09085 PF00361 Proton-conducting membrane transporter C1J04_RS09090 PF01899 Na+/H+ ion antiporter subunit C1J04_RS09095 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) C1J04_RS09100 PF03334 Na+/H+ antiporter subunit C1J04_RS09115 PF07687 Peptidase dimerisation domain C1J04_RS09115 PF01546 Peptidase family M20/M25/M40 C1J04_RS09120 PF00155 Aminotransferase class I and II C1J04_RS09130 PF04551 GcpE protein C1J04_RS09155 PF00155 Aminotransferase class I and II C1J04_RS09160 PF01520 N-acetylmuramoyl-L-alanine amidase C1J04_RS09160 PF11741 AMIN domain C1J04_RS09165 PF17092 Penicillin-binding protein OB-like domain C1J04_RS09165 PF00912 Transglycosylase C1J04_RS09165 PF00905 Penicillin binding protein transpeptidase domain C1J04_RS09170 PF03462 PCRF domain C1J04_RS09170 PF00472 RF-1 domain C1J04_RS09175 PF01425 Amidase C1J04_RS09190 PF10369 Small subunit of acetolactate synthase C1J04_RS09190 PF01842 ACT domain C1J04_RS09195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1J04_RS09195 PF00205 Thiamine pyrophosphate enzyme, central domain C1J04_RS09195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1J04_RS09200 PF00072 Response regulator receiver domain C1J04_RS09200 PF00196 Bacterial regulatory proteins, luxR family C1J04_RS09205 PF07730 Histidine kinase C1J04_RS09205 PF17200 Single Cache domain 2 C1J04_RS09210 PF03480 Bacterial extracellular solute-binding protein, family 7 C1J04_RS09220 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1J04_RS09225 PF04376 Arginine-tRNA-protein transferase, N terminus C1J04_RS09225 PF04377 Arginine-tRNA-protein transferase, C terminus C1J04_RS09240 PF08335 GlnD PII-uridylyltransferase C1J04_RS09240 PF03710 Glutamate-ammonia ligase adenylyltransferase C1J04_RS09255 PF10672 S-adenosylmethionine-dependent methyltransferase C1J04_RS09255 PF17785 PUA-like domain C1J04_RS09265 PF01435 Peptidase family M48 C1J04_RS09270 PF02566 OsmC-like protein C1J04_RS09290 PF00004 ATPase family associated with various cellular activities (AAA) C1J04_RS09290 PF07724 AAA domain (Cdc48 subfamily) C1J04_RS09290 PF17871 AAA lid domain C1J04_RS09290 PF02861 Clp amino terminal domain, pathogenicity island component C1J04_RS09290 PF10431 C-terminal, D2-small domain, of ClpB protein C1J04_RS09295 PF01258 Prokaryotic dksA/traR C4-type zinc finger C1J04_RS09300 PF01494 FAD binding domain C1J04_RS09305 PF02423 Ornithine cyclodeaminase/mu-crystallin family C1J04_RS09310 PF00491 Arginase family C1J04_RS09325 PF09335 SNARE associated Golgi protein C1J04_RS09335 PF00294 pfkB family carbohydrate kinase C1J04_RS09340 PF08125 Mannitol dehydrogenase C-terminal domain C1J04_RS09340 PF01232 Mannitol dehydrogenase Rossmann domain C1J04_RS09345 PF08402 TOBE domain C1J04_RS09345 PF00005 ABC transporter C1J04_RS09350 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS09355 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS09365 PF00356 Bacterial regulatory proteins, lacI family C1J04_RS09380 PF10011 Predicted membrane protein (DUF2254) C1J04_RS09385 PF00571 CBS domain C1J04_RS09385 PF01595 Cyclin M transmembrane N-terminal domain C1J04_RS09385 PF03471 Transporter associated domain C1J04_RS09395 PF00589 Phage integrase family C1J04_RS09395 PF02899 Phage integrase, N-terminal SAM-like domain C1J04_RS09405 PF01202 Shikimate kinase C1J04_RS09410 PF01761 3-dehydroquinate synthase C1J04_RS09415 PF00436 Single-strand binding protein family C1J04_RS09420 PF10145 Phage-related minor tail protein C1J04_RS09420 PF01464 Transglycosylase SLT domain C1J04_RS09420 PF01551 Peptidase family M23 C1J04_RS09430 PF00005 ABC transporter C1J04_RS09430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1J04_RS09435 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS09435 PF12911 N-terminal TM domain of oligopeptide transport permease C C1J04_RS09440 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS09455 PF00696 Amino acid kinase family C1J04_RS09460 PF01765 Ribosome recycling factor C1J04_RS09465 PF01255 Putative undecaprenyl diphosphate synthase C1J04_RS09475 PF13288 DXP reductoisomerase C-terminal domain C1J04_RS09475 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C1J04_RS09475 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C1J04_RS09480 PF17820 PDZ domain C1J04_RS09480 PF02163 Peptidase family M50 C1J04_RS09485 PF01103 Surface antigen C1J04_RS09485 PF07244 Surface antigen variable number repeat C1J04_RS09495 PF07977 FabA-like domain C1J04_RS09500 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C1J04_RS09500 PF00132 Bacterial transferase hexapeptide (six repeats) C1J04_RS09505 PF17930 LpxI N-terminal domain C1J04_RS09505 PF06230 LpxI C-terminal domain C1J04_RS09510 PF02684 Lipid-A-disaccharide synthetase C1J04_RS09525 PF00072 Response regulator receiver domain C1J04_RS09525 PF00486 Transcriptional regulatory protein, C terminal C1J04_RS09530 PF12826 Helix-hairpin-helix motif C1J04_RS09530 PF00533 BRCA1 C Terminus (BRCT) domain C1J04_RS09530 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C1J04_RS09530 PF01653 NAD-dependent DNA ligase adenylation domain C1J04_RS09530 PF03120 NAD-dependent DNA ligase OB-fold domain C1J04_RS09535 PF00271 Helicase conserved C-terminal domain C1J04_RS09535 PF00270 DEAD/DEAH box helicase C1J04_RS09535 PF17191 RecG wedge domain C1J04_RS09545 PF01502 Phosphoribosyl-AMP cyclohydrolase C1J04_RS09550 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1J04_RS09555 PF01134 Glucose inhibited division protein A C1J04_RS09560 PF00378 Enoyl-CoA hydratase/isomerase C1J04_RS09575 PF00155 Aminotransferase class I and II C1J04_RS09575 PF00392 Bacterial regulatory proteins, gntR family C1J04_RS09580 PF00572 Ribosomal protein L13 C1J04_RS09585 PF00380 Ribosomal protein S9/S16 C1J04_RS09590 PF00296 Luciferase-like monooxygenase C1J04_RS09595 PF00440 Bacterial regulatory proteins, tetR family C1J04_RS09595 PF13977 BetI-type transcriptional repressor, C-terminal C1J04_RS09600 PF03976 Polyphosphate kinase 2 (PPK2) C1J04_RS09605 PF00561 alpha/beta hydrolase fold C1J04_RS09610 PF04204 Homoserine O-succinyltransferase C1J04_RS09625 PF00892 EamA-like transporter family C1J04_RS09630 PF00117 Glutamine amidotransferase class-I C1J04_RS09630 PF02540 NAD synthase C1J04_RS09630 PF00958 GMP synthase C terminal domain C1J04_RS09635 PF06253 Trimethylamine methyltransferase (MTTB) C1J04_RS09650 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C1J04_RS09650 PF04055 Radical SAM superfamily C1J04_RS09655 PF00156 Phosphoribosyl transferase domain C1J04_RS09660 PF03364 Polyketide cyclase / dehydrase and lipid transport C1J04_RS09665 PF00909 Ammonium Transporter Family C1J04_RS09670 PF02464 Competence-damaged protein C1J04_RS09675 PF04608 Phosphatidylglycerophosphatase A C1J04_RS09680 PF02542 YgbB family C1J04_RS09680 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C1J04_RS09685 PF01207 Dihydrouridine synthase (Dus) C1J04_RS09690 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS09690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS09695 PF14532 Sigma-54 interaction domain C1J04_RS09695 PF00072 Response regulator receiver domain C1J04_RS09695 PF02954 Bacterial regulatory protein, Fis family C1J04_RS09700 PF00672 HAMP domain C1J04_RS09700 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS09700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS09700 PF00989 PAS fold C1J04_RS09705 PF02954 Bacterial regulatory protein, Fis family C1J04_RS09705 PF00072 Response regulator receiver domain C1J04_RS09705 PF00158 Sigma-54 interaction domain C1J04_RS09715 PF02254 TrkA-N domain C1J04_RS09715 PF02080 TrkA-C domain C1J04_RS09720 PF02386 Cation transport protein C1J04_RS09725 PF17209 Hfq protein C1J04_RS09730 PF16360 GTP-binding GTPase Middle Region C1J04_RS09730 PF01926 50S ribosome-binding GTPase C1J04_RS09730 PF13167 GTP-binding GTPase N-terminal C1J04_RS09740 PF00849 RNA pseudouridylate synthase C1J04_RS09750 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C1J04_RS09750 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C1J04_RS09760 PF00490 Delta-aminolevulinic acid dehydratase C1J04_RS09770 PF02559 CarD-like/TRCF domain C1J04_RS09770 PF00271 Helicase conserved C-terminal domain C1J04_RS09770 PF03461 TRCF domain C1J04_RS09770 PF17757 UvrB interaction domain C1J04_RS09770 PF00270 DEAD/DEAH box helicase C1J04_RS09780 PF02696 Uncharacterized ACR, YdiU/UPF0061 family C1J04_RS09790 PF01156 Inosine-uridine preferring nucleoside hydrolase C1J04_RS09795 PF03819 MazG nucleotide pyrophosphohydrolase domain C1J04_RS09800 PF01546 Peptidase family M20/M25/M40 C1J04_RS09800 PF07687 Peptidase dimerisation domain C1J04_RS09805 PF00491 Arginase family C1J04_RS09820 PF03462 PCRF domain C1J04_RS09820 PF00472 RF-1 domain C1J04_RS09825 PF17827 PrmC N-terminal domain C1J04_RS09825 PF05175 Methyltransferase small domain C1J04_RS09835 PF00398 Ribosomal RNA adenine dimethylase C1J04_RS09840 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C1J04_RS09845 PF00639 PPIC-type PPIASE domain C1J04_RS09845 PF09312 SurA N-terminal domain C1J04_RS09850 PF03968 OstA-like protein C1J04_RS09850 PF04453 LPS transport system D C1J04_RS09865 PF00883 Cytosol aminopeptidase family, catalytic domain C1J04_RS09880 PF01914 MarC family integral membrane protein C1J04_RS09885 PF12848 ABC transporter C1J04_RS09885 PF00005 ABC transporter C1J04_RS09890 PF00334 Nucleoside diphosphate kinase C1J04_RS09915 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1J04_RS09920 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS09925 PF00005 ABC transporter C1J04_RS09935 PF13416 Bacterial extracellular solute-binding protein C1J04_RS09940 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS09945 PF08402 TOBE domain C1J04_RS09945 PF00005 ABC transporter C1J04_RS09955 PF00300 Histidine phosphatase superfamily (branch 1) C1J04_RS09980 PF00829 Ribosomal prokaryotic L21 protein C1J04_RS09985 PF01016 Ribosomal L27 protein C1J04_RS09995 PF01810 LysE type translocator C1J04_RS10005 PF01926 50S ribosome-binding GTPase C1J04_RS10005 PF01018 GTP1/OBG C1J04_RS10010 PF00696 Amino acid kinase family C1J04_RS10010 PF01472 PUA domain C1J04_RS10015 PF00171 Aldehyde dehydrogenase family C1J04_RS10020 PF10090 Histidine phosphotransferase C-terminal domain C1J04_RS10040 PF00318 Ribosomal protein S2 C1J04_RS10045 PF00889 Elongation factor TS C1J04_RS10050 PF01220 Dehydroquinase class II C1J04_RS10060 PF01557 Fumarylacetoacetate (FAA) hydrolase family C1J04_RS10065 PF00486 Transcriptional regulatory protein, C terminal C1J04_RS10065 PF00072 Response regulator receiver domain C1J04_RS10070 PF01895 PhoU domain C1J04_RS10075 PF00005 ABC transporter C1J04_RS10080 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS10085 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS10095 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS10095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS10095 PF16736 Single Cache-like C1J04_RS10095 PF00989 PAS fold C1J04_RS10100 PF00132 Bacterial transferase hexapeptide (six repeats) C1J04_RS10105 PF00625 Guanylate kinase C1J04_RS10110 PF03755 YicC-like family, N-terminal region C1J04_RS10110 PF08340 Domain of unknown function (DUF1732) C1J04_RS10120 PF01474 Class-II DAHP synthetase family C1J04_RS10125 PF01965 DJ-1/PfpI family C1J04_RS10125 PF12833 Helix-turn-helix domain C1J04_RS10130 PF07995 Glucose / Sorbosone dehydrogenase C1J04_RS10140 PF12399 Branched-chain amino acid ATP-binding cassette transporter C1J04_RS10140 PF00005 ABC transporter C1J04_RS10150 PF00005 ABC transporter C1J04_RS10160 PF02653 Branched-chain amino acid transport system / permease component C1J04_RS10170 PF05872 Bacterial protein of unknown function (DUF853) C1J04_RS10180 PF02801 Beta-ketoacyl synthase, C-terminal domain C1J04_RS10180 PF00109 Beta-ketoacyl synthase, N-terminal domain C1J04_RS10190 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C1J04_RS10190 PF00132 Bacterial transferase hexapeptide (six repeats) C1J04_RS10195 PF13401 AAA domain C1J04_RS10195 PF01471 Putative peptidoglycan binding domain C1J04_RS10205 PF09335 SNARE associated Golgi protein C1J04_RS10215 PF01411 tRNA synthetases class II (A) C1J04_RS10215 PF02272 DHHA1 domain C1J04_RS10215 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C1J04_RS10220 PF12794 Mechanosensitive ion channel inner membrane domain 1 C1J04_RS10220 PF00924 Mechanosensitive ion channel C1J04_RS10220 PF12795 Mechanosensitive ion channel porin domain C1J04_RS10225 PF00291 Pyridoxal-phosphate dependent enzyme C1J04_RS10225 PF00571 CBS domain C1J04_RS10230 PF00293 NUDIX domain C1J04_RS10245 PF00875 DNA photolyase C1J04_RS10245 PF03441 FAD binding domain of DNA photolyase C1J04_RS10250 PF00107 Zinc-binding dehydrogenase C1J04_RS10255 PF00392 Bacterial regulatory proteins, gntR family C1J04_RS10255 PF07729 FCD domain C1J04_RS10270 PF02417 Chromate transporter C1J04_RS10280 PF00206 Lyase C1J04_RS10280 PF10415 Fumarase C C-terminus C1J04_RS10300 PF00274 Fructose-bisphosphate aldolase class-I C1J04_RS10305 PF00067 Cytochrome P450 C1J04_RS10315 PF02683 Cytochrome C biogenesis protein transmembrane region C1J04_RS10320 PF01206 Sulfurtransferase TusA C1J04_RS10325 PF12111 Polyribonucleotide phosphorylase C terminal C1J04_RS10325 PF10150 Ribonuclease E/G family C1J04_RS10325 PF00575 S1 RNA binding domain C1J04_RS10335 PF00158 Sigma-54 interaction domain C1J04_RS10335 PF02954 Bacterial regulatory protein, Fis family C1J04_RS10335 PF00072 Response regulator receiver domain C1J04_RS10340 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS10340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS10340 PF02743 Cache domain C1J04_RS10350 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase C1J04_RS10355 PF01259 SAICAR synthetase C1J04_RS10360 PF02310 B12 binding domain C1J04_RS10360 PF02607 B12 binding domain C1J04_RS10360 PF02965 Vitamin B12 dependent methionine synthase, activation domain C1J04_RS10360 PF00809 Pterin binding enzyme C1J04_RS10360 PF02574 Homocysteine S-methyltransferase C1J04_RS10365 PF04055 Radical SAM superfamily C1J04_RS10370 PF02310 B12 binding domain C1J04_RS10370 PF02607 B12 binding domain C1J04_RS10380 PF02657 Fe-S metabolism associated domain C1J04_RS10390 PF01612 3'-5' exonuclease C1J04_RS10390 PF00570 HRDC domain C1J04_RS10395 PF00551 Formyl transferase C1J04_RS10400 PF02769 AIR synthase related protein, C-terminal domain C1J04_RS10400 PF00586 AIR synthase related protein, N-terminal domain C1J04_RS10410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS10410 PF00989 PAS fold C1J04_RS10410 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS10415 PF00171 Aldehyde dehydrogenase family C1J04_RS10420 PF06693 Protein of unknown function (DUF1190) C1J04_RS10425 PF03738 Glutathionylspermidine synthase preATP-grasp C1J04_RS10435 PF13460 NAD(P)H-binding C1J04_RS10440 PF06508 Queuosine biosynthesis protein QueC C1J04_RS10445 PF01242 6-pyruvoyl tetrahydropterin synthase C1J04_RS10450 PF04055 Radical SAM superfamily C1J04_RS10455 PF14489 QueF-like protein C1J04_RS10460 PF00501 AMP-binding enzyme C1J04_RS10460 PF13193 AMP-binding enzyme C-terminal domain C1J04_RS10475 PF00342 Phosphoglucose isomerase C1J04_RS10480 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C1J04_RS10485 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C1J04_RS10485 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C1J04_RS10500 PF00521 DNA gyrase/topoisomerase IV, subunit A C1J04_RS10500 PF03989 DNA gyrase C-terminal domain, beta-propeller C1J04_RS10510 PF02074 Carboxypeptidase Taq (M32) metallopeptidase C1J04_RS10515 PF02628 Cytochrome oxidase assembly protein C1J04_RS10540 PF00294 pfkB family carbohydrate kinase C1J04_RS10540 PF01467 Cytidylyltransferase-like C1J04_RS10545 PF04227 Indigoidine synthase A like protein C1J04_RS10565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1J04_RS10575 PF13193 AMP-binding enzyme C-terminal domain C1J04_RS10575 PF00501 AMP-binding enzyme C1J04_RS10590 PF07690 Major Facilitator Superfamily C1J04_RS10595 PF00271 Helicase conserved C-terminal domain C1J04_RS10595 PF00270 DEAD/DEAH box helicase C1J04_RS10610 PF00113 Enolase, C-terminal TIM barrel domain C1J04_RS10610 PF03952 Enolase, N-terminal domain C1J04_RS10620 PF03702 Anhydro-N-acetylmuramic acid kinase C1J04_RS10625 PF00579 tRNA synthetases class I (W and Y) C1J04_RS10630 PF00005 ABC transporter C1J04_RS10630 PF16326 ABC transporter C-terminal domain C1J04_RS10650 PF01783 Ribosomal L32p protein family C1J04_RS10655 PF02504 Fatty acid synthesis protein C1J04_RS10660 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C1J04_RS10660 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C1J04_RS10665 PF00216 Bacterial DNA-binding protein C1J04_RS10670 PF13411 MerR HTH family regulatory protein C1J04_RS10680 PF00692 dUTPase C1J04_RS10690 PF04079 Segregation and condensation complex subunit ScpB C1J04_RS10695 PF02616 Segregation and condensation protein ScpA C1J04_RS10700 PF00933 Glycosyl hydrolase family 3 N terminal domain C1J04_RS10710 PF03485 Arginyl tRNA synthetase N terminal domain C1J04_RS10710 PF05746 DALR anticodon binding domain C1J04_RS10710 PF00750 tRNA synthetases class I (R) C1J04_RS10715 PF01966 HD domain C1J04_RS10715 PF13286 Phosphohydrolase-associated domain C1J04_RS10720 PF01521 Iron-sulphur cluster biosynthesis C1J04_RS10760 PF07690 Major Facilitator Superfamily C1J04_RS10770 PF08502 LeuA allosteric (dimerisation) domain C1J04_RS10770 PF00682 HMGL-like C1J04_RS10775 PF01406 tRNA synthetases class I (C) catalytic domain C1J04_RS10780 PF00155 Aminotransferase class I and II C1J04_RS10790 PF13091 PLD-like domain C1J04_RS10790 PF13396 Phospholipase_D-nuclease N-terminal C1J04_RS10805 PF01037 Lrp/AsnC ligand binding domain C1J04_RS10825 PF01695 IstB-like ATP binding protein C1J04_RS10830 PF00665 Integrase core domain C1J04_RS10840 PF05717 IS66 Orf2 like protein C1J04_RS10845 PF13817 IS66 C-terminal element C1J04_RS10845 PF13005 zinc-finger binding domain of transposase IS66 C1J04_RS10845 PF03050 Transposase IS66 family C1J04_RS10845 PF13007 Transposase C of IS166 homeodomain C1J04_RS10870 PF03795 YCII-related domain C1J04_RS10875 PF08281 Sigma-70, region 4 C1J04_RS10875 PF04542 Sigma-70 region 2 C1J04_RS10895 PF00462 Glutaredoxin C1J04_RS10900 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1J04_RS10900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1J04_RS10910 PF08471 Class II vitamin B12-dependent ribonucleotide reductase C1J04_RS10910 PF02867 Ribonucleotide reductase, barrel domain C1J04_RS10925 PF00313 'Cold-shock' DNA-binding domain C1J04_RS10930 PF01243 Pyridoxamine 5'-phosphate oxidase C1J04_RS10930 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C1J04_RS10940 PF00156 Phosphoribosyl transferase domain C1J04_RS10945 PF00155 Aminotransferase class I and II C1J04_RS10955 PF00425 chorismate binding enzyme C1J04_RS10955 PF04715 Anthranilate synthase component I, N terminal region C1J04_RS10970 PF00117 Glutamine amidotransferase class-I C1J04_RS10975 PF02885 Glycosyl transferase family, helical bundle domain C1J04_RS10975 PF00591 Glycosyl transferase family, a/b domain C1J04_RS10980 PF03167 Uracil DNA glycosylase superfamily C1J04_RS10985 PF00218 Indole-3-glycerol phosphate synthase C1J04_RS10990 PF01967 MoaC family C1J04_RS10995 PF03453 MoeA N-terminal region (domain I and II) C1J04_RS10995 PF03454 MoeA C-terminal region (domain IV) C1J04_RS10995 PF00994 Probable molybdopterin binding domain C1J04_RS11000 PF00717 Peptidase S24-like C1J04_RS11000 PF01726 LexA DNA binding domain C1J04_RS11005 PF00753 Metallo-beta-lactamase superfamily C1J04_RS11005 PF03772 Competence protein C1J04_RS11005 PF13567 Domain of unknown function (DUF4131) C1J04_RS11010 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1J04_RS11015 PF00285 Citrate synthase, C-terminal domain C1J04_RS11025 PF00378 Enoyl-CoA hydratase/isomerase C1J04_RS11030 PF03918 Cytochrome C biogenesis protein C1J04_RS11035 PF01578 Cytochrome C assembly protein C1J04_RS11035 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C1J04_RS11050 PF03100 CcmE C1J04_RS11055 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1J04_RS11055 PF02774 Semialdehyde dehydrogenase, dimerisation domain C1J04_RS11060 PF01177 Asp/Glu/Hydantoin racemase C1J04_RS11075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1J04_RS11075 PF03466 LysR substrate binding domain C1J04_RS11080 PF00586 AIR synthase related protein, N-terminal domain C1J04_RS11080 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C1J04_RS11080 PF02769 AIR synthase related protein, C-terminal domain C1J04_RS11090 PF00004 ATPase family associated with various cellular activities (AAA) C1J04_RS11090 PF02190 ATP-dependent protease La (LON) substrate-binding domain C1J04_RS11090 PF05362 Lon protease (S16) C-terminal proteolytic domain C1J04_RS11100 PF01979 Amidohydrolase family C1J04_RS11105 PF00156 Phosphoribosyl transferase domain C1J04_RS11110 PF03796 DnaB-like helicase C terminal domain C1J04_RS11110 PF00772 DnaB-like helicase N terminal domain C1J04_RS11120 PF01738 Dienelactone hydrolase family C1J04_RS11125 PF00842 Alanine racemase, C-terminal domain C1J04_RS11125 PF01168 Alanine racemase, N-terminal domain C1J04_RS11140 PF06745 KaiC C1J04_RS11140 PF18073 Rubredoxin metal binding domain C1J04_RS11150 PF13537 Glutamine amidotransferase domain C1J04_RS11150 PF00156 Phosphoribosyl transferase domain C1J04_RS11160 PF00106 short chain dehydrogenase C1J04_RS11165 PF01975 Survival protein SurE C1J04_RS11185 PF00902 Sec-independent protein translocase protein (TatC) C1J04_RS11190 PF02416 mttA/Hcf106 family C1J04_RS11195 PF02416 mttA/Hcf106 family C1J04_RS11205 PF00005 ABC transporter C1J04_RS11205 PF08402 TOBE domain C1J04_RS11230 PF00009 Elongation factor Tu GTP binding domain C1J04_RS11230 PF03144 Elongation factor Tu domain 2 C1J04_RS11230 PF16658 Class II release factor RF3, C-terminal domain C1J04_RS11240 PF00270 DEAD/DEAH box helicase C1J04_RS11240 PF00271 Helicase conserved C-terminal domain C1J04_RS11245 PF17770 Ribonuclease J C-terminal domain C1J04_RS11245 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C1J04_RS11245 PF12706 Beta-lactamase superfamily domain C1J04_RS11250 PF03309 Type III pantothenate kinase C1J04_RS11255 PF03099 Biotin/lipoate A/B protein ligase family C1J04_RS11255 PF02237 Biotin protein ligase C terminal domain C1J04_RS11260 PF00361 Proton-conducting membrane transporter C1J04_RS11265 PF00361 Proton-conducting membrane transporter C1J04_RS11270 PF00361 Proton-conducting membrane transporter C1J04_RS11270 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C1J04_RS11275 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C1J04_RS11280 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C1J04_RS11285 PF02627 Carboxymuconolactone decarboxylase family C1J04_RS11290 PF12838 4Fe-4S dicluster domain C1J04_RS11295 PF00146 NADH dehydrogenase C1J04_RS11305 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal C1J04_RS11305 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C1J04_RS11305 PF00384 Molybdopterin oxidoreductase C1J04_RS11325 PF10531 SLBB domain C1J04_RS11325 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C1J04_RS11325 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C1J04_RS11335 PF00829 Ribosomal prokaryotic L21 protein C1J04_RS11345 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C1J04_RS11350 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C1J04_RS11355 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C1J04_RS11360 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C1J04_RS11365 PF16363 GDP-mannose 4,6 dehydratase C1J04_RS11370 PF00378 Enoyl-CoA hydratase/isomerase C1J04_RS11375 PF00682 HMGL-like C1J04_RS11385 PF00289 Biotin carboxylase, N-terminal domain C1J04_RS11385 PF00364 Biotin-requiring enzyme C1J04_RS11385 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1J04_RS11385 PF02785 Biotin carboxylase C-terminal domain C1J04_RS11390 PF01039 Carboxyl transferase domain C1J04_RS11395 PF13193 AMP-binding enzyme C-terminal domain C1J04_RS11395 PF00501 AMP-binding enzyme C1J04_RS11405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS11405 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS11405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS11415 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1J04_RS11420 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C1J04_RS11425 PF13419 Haloacid dehalogenase-like hydrolase C1J04_RS11430 PF00132 Bacterial transferase hexapeptide (six repeats) C1J04_RS11430 PF12804 MobA-like NTP transferase domain C1J04_RS11435 PF01380 SIS domain C1J04_RS11450 PF04055 Radical SAM superfamily C1J04_RS11450 PF06463 Molybdenum Cofactor Synthesis C C1J04_RS11455 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C1J04_RS11460 PF00534 Glycosyl transferases group 1 C1J04_RS11465 PF07687 Peptidase dimerisation domain C1J04_RS11465 PF01546 Peptidase family M20/M25/M40 C1J04_RS11470 PF01546 Peptidase family M20/M25/M40 C1J04_RS11470 PF07687 Peptidase dimerisation domain C1J04_RS11475 PF01266 FAD dependent oxidoreductase C1J04_RS11480 PF01546 Peptidase family M20/M25/M40 C1J04_RS11480 PF07687 Peptidase dimerisation domain C1J04_RS11485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1J04_RS11485 PF00005 ABC transporter C1J04_RS11490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1J04_RS11495 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS11500 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS11500 PF12911 N-terminal TM domain of oligopeptide transport permease C C1J04_RS11515 PF04273 Putative phosphatase (DUF442) C1J04_RS11515 PF00753 Metallo-beta-lactamase superfamily C1J04_RS11520 PF02233 NAD(P) transhydrogenase beta subunit C1J04_RS11525 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C1J04_RS11525 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C1J04_RS11525 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C1J04_RS11530 PF00106 short chain dehydrogenase C1J04_RS11550 PF01274 Malate synthase C1J04_RS11565 PF17432 Domain of unknown function (DUF3458_C) ARM repeats C1J04_RS11565 PF11940 Domain of unknown function (DUF3458) Ig-like fold C1J04_RS11565 PF01433 Peptidase family M1 domain C1J04_RS11585 PF02934 GatB/GatE catalytic domain C1J04_RS11585 PF02637 GatB domain C1J04_RS11605 PF01556 DnaJ C terminal domain C1J04_RS11605 PF00226 DnaJ domain C1J04_RS11605 PF00684 DnaJ central domain C1J04_RS11615 PF07728 AAA domain (dynein-related subfamily) C1J04_RS11615 PF08406 CbbQ/NirQ/NorQ C-terminal C1J04_RS11615 PF12556 Cobaltochelatase CobS subunit N terminal C1J04_RS11620 PF11775 Cobalamin biosynthesis protein CobT VWA domain C1J04_RS11620 PF06213 Cobalamin biosynthesis protein CobT C1J04_RS11640 PF00654 Voltage gated chloride channel C1J04_RS11645 PF02463 RecF/RecN/SMC N terminal domain C1J04_RS11645 PF13476 AAA domain C1J04_RS11650 PF13525 Outer membrane lipoprotein C1J04_RS11655 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C1J04_RS11660 PF12327 FtsZ family, C-terminal domain C1J04_RS11660 PF00091 Tubulin/FtsZ family, GTPase domain C1J04_RS11665 PF02491 SHS2 domain inserted in FTSA C1J04_RS11670 PF03799 Cell division protein FtsQ C1J04_RS11675 PF01820 D-ala D-ala ligase N-terminus C1J04_RS11675 PF07478 D-ala D-ala ligase C-terminus C1J04_RS11680 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C1J04_RS11680 PF01565 FAD binding domain C1J04_RS11700 PF08245 Mur ligase middle domain C1J04_RS11700 PF02875 Mur ligase family, glutamate ligase domain C1J04_RS11700 PF01225 Mur ligase family, catalytic domain C1J04_RS11705 PF03033 Glycosyltransferase family 28 N-terminal domain C1J04_RS11705 PF04101 Glycosyltransferase family 28 C-terminal domain C1J04_RS11710 PF01098 Cell cycle protein C1J04_RS11730 PF07690 Major Facilitator Superfamily C1J04_RS11735 PF01593 Flavin containing amine oxidoreductase C1J04_RS11760 PF02875 Mur ligase family, glutamate ligase domain C1J04_RS11760 PF08245 Mur ligase middle domain C1J04_RS11765 PF04960 Glutaminase C1J04_RS11770 PF00953 Glycosyl transferase family 4 C1J04_RS11770 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C1J04_RS11775 PF01225 Mur ligase family, catalytic domain C1J04_RS11775 PF08245 Mur ligase middle domain C1J04_RS11775 PF02875 Mur ligase family, glutamate ligase domain C1J04_RS11780 PF08245 Mur ligase middle domain C1J04_RS11780 PF01225 Mur ligase family, catalytic domain C1J04_RS11780 PF02875 Mur ligase family, glutamate ligase domain C1J04_RS11785 PF00905 Penicillin binding protein transpeptidase domain C1J04_RS11785 PF03717 Penicillin-binding Protein dimerisation domain C1J04_RS11795 PF01795 MraW methylase family C1J04_RS11800 PF02381 MraZ protein, putative antitoxin-like C1J04_RS11805 PF10609 NUBPL iron-transfer P-loop NTPase C1J04_RS11815 PF00580 UvrD/REP helicase N-terminal domain C1J04_RS11815 PF13361 UvrD-like helicase C-terminal domain C1J04_RS11820 PF02785 Biotin carboxylase C-terminal domain C1J04_RS11820 PF00289 Biotin carboxylase, N-terminal domain C1J04_RS11820 PF00364 Biotin-requiring enzyme C1J04_RS11820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1J04_RS11820 PF00682 HMGL-like C1J04_RS11820 PF02436 Conserved carboxylase domain C1J04_RS11825 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1J04_RS11835 PF09424 Yqey-like protein C1J04_RS11840 PF00117 Glutamine amidotransferase class-I C1J04_RS11840 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C1J04_RS11850 PF07729 FCD domain C1J04_RS11850 PF00392 Bacterial regulatory proteins, gntR family C1J04_RS11860 PF01494 FAD binding domain C1J04_RS11870 PF13404 AsnC-type helix-turn-helix domain C1J04_RS11870 PF01037 Lrp/AsnC ligand binding domain C1J04_RS11880 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C1J04_RS11880 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C1J04_RS11890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C1J04_RS11890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C1J04_RS11890 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C1J04_RS11890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C1J04_RS11895 PF00809 Pterin binding enzyme C1J04_RS11900 PF02152 Dihydroneopterin aldolase C1J04_RS11910 PF00391 PEP-utilising enzyme, mobile domain C1J04_RS11910 PF02896 PEP-utilising enzyme, TIM barrel domain C1J04_RS11910 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C1J04_RS11915 PF05746 DALR anticodon binding domain C1J04_RS11915 PF02092 Glycyl-tRNA synthetase beta subunit C1J04_RS11925 PF02091 Glycyl-tRNA synthetase alpha subunit C1J04_RS11930 PF02674 Colicin V production protein C1J04_RS11935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1J04_RS11935 PF00205 Thiamine pyrophosphate enzyme, central domain C1J04_RS11935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1J04_RS11940 PF02386 Cation transport protein C1J04_RS11950 PF02649 Type I GTP cyclohydrolase folE2 C1J04_RS11955 PF01053 Cys/Met metabolism PLP-dependent enzyme C1J04_RS11960 PF04279 Intracellular septation protein A C1J04_RS11970 PF00448 SRP54-type protein, GTPase domain C1J04_RS11970 PF02881 SRP54-type protein, helical bundle domain C1J04_RS11980 PF10531 SLBB domain C1J04_RS11980 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C1J04_RS11980 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C1J04_RS11985 PF00487 Fatty acid desaturase C1J04_RS11995 PF13742 OB-fold nucleic acid binding domain C1J04_RS11995 PF02601 Exonuclease VII, large subunit C1J04_RS12000 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C1J04_RS12000 PF02843 Phosphoribosylglycinamide synthetase, C domain C1J04_RS12000 PF02844 Phosphoribosylglycinamide synthetase, N domain C1J04_RS12010 PF00111 2Fe-2S iron-sulfur cluster binding domain C1J04_RS12020 PF00005 ABC transporter C1J04_RS12025 PF01032 FecCD transport family C1J04_RS12030 PF01594 AI-2E family transporter C1J04_RS12035 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1J04_RS12050 PF16177 Acetyl-coenzyme A synthetase N-terminus C1J04_RS12050 PF00501 AMP-binding enzyme C1J04_RS12050 PF13193 AMP-binding enzyme C-terminal domain C1J04_RS12060 PF01613 Flavin reductase like domain C1J04_RS12070 PF01103 Surface antigen C1J04_RS12070 PF07244 Surface antigen variable number repeat C1J04_RS12070 PF17243 POTRA domain TamA domain 1 C1J04_RS12075 PF00330 Aconitase family (aconitate hydratase) C1J04_RS12075 PF00694 Aconitase C-terminal domain C1J04_RS12095 PF10397 Adenylosuccinate lyase C-terminus C1J04_RS12095 PF00206 Lyase C1J04_RS12100 PF01053 Cys/Met metabolism PLP-dependent enzyme C1J04_RS12115 PF03099 Biotin/lipoate A/B protein ligase family C1J04_RS12120 PF00115 Cytochrome C and Quinol oxidase polypeptide I C1J04_RS12145 PF00072 Response regulator receiver domain C1J04_RS12145 PF00486 Transcriptional regulatory protein, C terminal C1J04_RS12160 PF00475 Imidazoleglycerol-phosphate dehydratase C1J04_RS12165 PF00117 Glutamine amidotransferase class-I C1J04_RS12180 PF00977 Histidine biosynthesis protein C1J04_RS12185 PF00977 Histidine biosynthesis protein C1J04_RS12190 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C1J04_RS12195 PF13380 CoA binding domain C1J04_RS12205 PF08032 RNA 2'-O ribose methyltransferase substrate binding C1J04_RS12205 PF00588 SpoU rRNA Methylase family C1J04_RS12215 PF01053 Cys/Met metabolism PLP-dependent enzyme C1J04_RS12220 PF04402 Protein of unknown function (DUF541) C1J04_RS12230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1J04_RS12235 PF01037 Lrp/AsnC ligand binding domain C1J04_RS12240 PF02254 TrkA-N domain C1J04_RS12240 PF00999 Sodium/hydrogen exchanger family C1J04_RS12245 PF02559 CarD-like/TRCF domain C1J04_RS12250 PF00037 4Fe-4S binding domain C1J04_RS12250 PF11953 Domain of unknown function (DUF3470) C1J04_RS12255 PF01479 S4 domain C1J04_RS12275 PF12146 Serine aminopeptidase, S33 C1J04_RS12285 PF01068 ATP dependent DNA ligase domain C1J04_RS12285 PF04679 ATP dependent DNA ligase C terminal region C1J04_RS12285 PF04675 DNA ligase N terminus C1J04_RS12295 PF01258 Prokaryotic dksA/traR C4-type zinc finger C1J04_RS12300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C1J04_RS12300 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C1J04_RS12305 PF00140 Sigma-70 factor, region 1.2 C1J04_RS12305 PF04542 Sigma-70 region 2 C1J04_RS12305 PF04545 Sigma-70, region 4 C1J04_RS12310 PF00849 RNA pseudouridylate synthase C1J04_RS12345 PF01029 NusB family C1J04_RS12350 PF00885 6,7-dimethyl-8-ribityllumazine synthase C1J04_RS12355 PF00925 GTP cyclohydrolase II C1J04_RS12355 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C1J04_RS12365 PF00677 Lumazine binding domain C1J04_RS12370 PF05159 Capsule polysaccharide biosynthesis protein C1J04_RS12380 PF05159 Capsule polysaccharide biosynthesis protein C1J04_RS12385 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C1J04_RS12385 PF01872 RibD C-terminal domain C1J04_RS12390 PF03477 ATP cone domain C1J04_RS12395 PF00106 short chain dehydrogenase C1J04_RS12400 PF01894 Uncharacterised protein family UPF0047 C1J04_RS12415 PF03979 Sigma-70 factor, region 1.1 C1J04_RS12415 PF04542 Sigma-70 region 2 C1J04_RS12415 PF04539 Sigma-70 region 3 C1J04_RS12415 PF00140 Sigma-70 factor, region 1.2 C1J04_RS12415 PF04545 Sigma-70, region 4 C1J04_RS12415 PF04546 Sigma-70, non-essential region C1J04_RS12420 PF01807 CHC2 zinc finger C1J04_RS12420 PF08275 DNA primase catalytic core, N-terminal domain C1J04_RS12420 PF13662 Toprim domain C1J04_RS12420 PF08278 DNA primase DnaG DnaB-binding C1J04_RS12420 PF10410 DnaB-helicase binding domain of primase C1J04_RS12430 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C1J04_RS12430 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C1J04_RS12465 PF08281 Sigma-70, region 4 C1J04_RS12465 PF04542 Sigma-70 region 2 C1J04_RS12490 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C1J04_RS12490 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C1J04_RS12500 PF05853 beta-keto acid cleavage enzyme C1J04_RS12505 PF00248 Aldo/keto reductase family C1J04_RS12515 PF09334 tRNA synthetases class I (M) C1J04_RS12525 PF00872 Transposase, Mutator family C1J04_RS12540 PF01037 Lrp/AsnC ligand binding domain C1J04_RS12545 PF01619 Proline dehydrogenase C1J04_RS12545 PF14850 DNA-binding domain of Proline dehydrogenase C1J04_RS12545 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C1J04_RS12545 PF00171 Aldehyde dehydrogenase family C1J04_RS12560 PF00459 Inositol monophosphatase family C1J04_RS12565 PF00107 Zinc-binding dehydrogenase C1J04_RS12565 PF16884 N-terminal domain of oxidoreductase C1J04_RS12580 PF03466 LysR substrate binding domain C1J04_RS12580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1J04_RS12585 PF02219 Methylenetetrahydrofolate reductase C1J04_RS12595 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C1J04_RS12595 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C1J04_RS12600 PF00133 tRNA synthetases class I (I, L, M and V) C1J04_RS12600 PF08264 Anticodon-binding domain of tRNA C1J04_RS12600 PF10458 Valyl tRNA synthetase tRNA binding arm C1J04_RS12605 PF00378 Enoyl-CoA hydratase/isomerase C1J04_RS12610 PF00155 Aminotransferase class I and II C1J04_RS12620 PF00266 Aminotransferase class-V C1J04_RS12625 PF00005 ABC transporter C1J04_RS12625 PF00664 ABC transporter transmembrane region C1J04_RS12635 PF01571 Aminomethyltransferase folate-binding domain C1J04_RS12640 PF01132 Elongation factor P (EF-P) OB domain C1J04_RS12640 PF08207 Elongation factor P (EF-P) KOW-like domain C1J04_RS12640 PF09285 Elongation factor P, C-terminal C1J04_RS12660 PF02321 Outer membrane efflux protein C1J04_RS12675 PF01472 PUA domain C1J04_RS12675 PF00696 Amino acid kinase family C1J04_RS12685 PF00465 Iron-containing alcohol dehydrogenase C1J04_RS12690 PF05524 PEP-utilising enzyme, N-terminal C1J04_RS12690 PF02896 PEP-utilising enzyme, TIM barrel domain C1J04_RS12690 PF00391 PEP-utilising enzyme, mobile domain C1J04_RS12695 PF01842 ACT domain C1J04_RS12695 PF13840 ACT domain C1J04_RS12695 PF00696 Amino acid kinase family C1J04_RS12715 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS12720 PF03459 TOBE domain C1J04_RS12720 PF00005 ABC transporter C1J04_RS12740 PF00916 Sulfate permease family C1J04_RS12740 PF01740 STAS domain C1J04_RS12745 PF01048 Phosphorylase superfamily C1J04_RS12750 PF00156 Phosphoribosyl transferase domain C1J04_RS12755 PF01565 FAD binding domain C1J04_RS12755 PF02913 FAD linked oxidases, C-terminal domain C1J04_RS12775 PF16916 Dimerisation domain of Zinc Transporter C1J04_RS12775 PF01545 Cation efflux family C1J04_RS12780 PF00005 ABC transporter C1J04_RS12790 PF00793 DAHP synthetase I family C1J04_RS12795 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C1J04_RS12805 PF00216 Bacterial DNA-binding protein C1J04_RS12810 PF00575 S1 RNA binding domain C1J04_RS12820 PF02224 Cytidylate kinase C1J04_RS12825 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C1J04_RS12830 PF02390 Putative methyltransferase C1J04_RS12835 PF02028 BCCT, betaine/carnitine/choline family transporter C1J04_RS12840 PF02772 S-adenosylmethionine synthetase, central domain C1J04_RS12840 PF02773 S-adenosylmethionine synthetase, C-terminal domain C1J04_RS12840 PF00438 S-adenosylmethionine synthetase, N-terminal domain C1J04_RS12845 PF00795 Carbon-nitrogen hydrolase C1J04_RS12850 PF03471 Transporter associated domain C1J04_RS12850 PF00571 CBS domain C1J04_RS12855 PF02130 Uncharacterized protein family UPF0054 C1J04_RS12860 PF02562 PhoH-like protein C1J04_RS12870 PF00691 OmpA family C1J04_RS12875 PF04055 Radical SAM superfamily C1J04_RS12875 PF01938 TRAM domain C1J04_RS12875 PF00919 Uncharacterized protein family UPF0004 C1J04_RS12890 PF07977 FabA-like domain C1J04_RS12895 PF02801 Beta-ketoacyl synthase, C-terminal domain C1J04_RS12895 PF00109 Beta-ketoacyl synthase, N-terminal domain C1J04_RS12905 PF02926 THUMP domain C1J04_RS12905 PF01170 Putative RNA methylase family UPF0020 C1J04_RS12910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1J04_RS12915 PF13419 Haloacid dehalogenase-like hydrolase C1J04_RS12920 PF00561 alpha/beta hydrolase fold C1J04_RS12925 PF00291 Pyridoxal-phosphate dependent enzyme C1J04_RS12930 PF12146 Serine aminopeptidase, S33 C1J04_RS12940 PF00206 Lyase C1J04_RS12940 PF10397 Adenylosuccinate lyase C-terminus C1J04_RS12950 PF00107 Zinc-binding dehydrogenase C1J04_RS12950 PF08240 Alcohol dehydrogenase GroES-like domain C1J04_RS12955 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C1J04_RS12955 PF13378 Enolase C-terminal domain-like C1J04_RS12960 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS12960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS12960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS12965 PF03466 LysR substrate binding domain C1J04_RS12965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1J04_RS12975 PF02872 5'-nucleotidase, C-terminal domain C1J04_RS12975 PF00149 Calcineurin-like phosphoesterase C1J04_RS12990 PF01180 Dihydroorotate dehydrogenase C1J04_RS12995 PF01554 MatE C1J04_RS13010 PF00376 MerR family regulatory protein C1J04_RS13010 PF09278 MerR, DNA binding C1J04_RS13020 PF00196 Bacterial regulatory proteins, luxR family C1J04_RS13020 PF00072 Response regulator receiver domain C1J04_RS13025 PF13411 MerR HTH family regulatory protein C1J04_RS13030 PF12806 Acetyl-CoA dehydrogenase C-terminal like C1J04_RS13030 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS13030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS13030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS13040 PF00043 Glutathione S-transferase, C-terminal domain C1J04_RS13040 PF02798 Glutathione S-transferase, N-terminal domain C1J04_RS13045 PF00108 Thiolase, N-terminal domain C1J04_RS13045 PF02803 Thiolase, C-terminal domain C1J04_RS13055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C1J04_RS13055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C1J04_RS13055 PF00378 Enoyl-CoA hydratase/isomerase C1J04_RS13065 PF00501 AMP-binding enzyme C1J04_RS13065 PF13193 AMP-binding enzyme C-terminal domain C1J04_RS13090 PF01676 Metalloenzyme superfamily C1J04_RS13095 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain C1J04_RS13095 PF00591 Glycosyl transferase family, a/b domain C1J04_RS13095 PF02885 Glycosyl transferase family, helical bundle domain C1J04_RS13100 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C1J04_RS13105 PF01515 Phosphate acetyl/butaryl transferase C1J04_RS13105 PF03949 Malic enzyme, NAD binding domain C1J04_RS13105 PF00390 Malic enzyme, N-terminal domain C1J04_RS13115 PF16177 Acetyl-coenzyme A synthetase N-terminus C1J04_RS13115 PF13193 AMP-binding enzyme C-terminal domain C1J04_RS13115 PF00501 AMP-binding enzyme C1J04_RS13120 PF05532 CsbD-like C1J04_RS13125 PF01513 ATP-NAD kinase C1J04_RS13130 PF00464 Serine hydroxymethyltransferase C1J04_RS13140 PF12697 Alpha/beta hydrolase family C1J04_RS13145 PF02142 MGS-like domain C1J04_RS13145 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C1J04_RS13145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1J04_RS13150 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C1J04_RS13150 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C1J04_RS13155 PF00265 Thymidine kinase C1J04_RS13160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1J04_RS13160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1J04_RS13165 PF01588 Putative tRNA binding domain C1J04_RS13170 PF03807 NADP oxidoreductase coenzyme F420-dependent C1J04_RS13170 PF14748 Pyrroline-5-carboxylate reductase dimerisation C1J04_RS13185 PF01790 Prolipoprotein diacylglyceryl transferase C1J04_RS13195 PF02578 Multi-copper polyphenol oxidoreductase laccase C1J04_RS13205 PF01037 Lrp/AsnC ligand binding domain C1J04_RS13210 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1J04_RS13225 PF00011 Hsp20/alpha crystallin family C1J04_RS13235 PF00731 AIR carboxylase C1J04_RS13240 PF02222 ATP-grasp domain C1J04_RS13240 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C1J04_RS13245 PF07969 Amidohydrolase family C1J04_RS13255 PF00293 NUDIX domain C1J04_RS13255 PF13344 Haloacid dehalogenase-like hydrolase C1J04_RS13260 PF00892 EamA-like transporter family C1J04_RS13265 PF00118 TCP-1/cpn60 chaperonin family C1J04_RS13270 PF00166 Chaperonin 10 Kd subunit C1J04_RS13280 PF02833 DHHA2 domain C1J04_RS13280 PF01368 DHH family C1J04_RS13290 PF00440 Bacterial regulatory proteins, tetR family C1J04_RS13290 PF16925 Tetracyclin repressor-like, C-terminal domain C1J04_RS13300 PF01575 MaoC like domain C1J04_RS13305 PF01687 Riboflavin kinase C1J04_RS13305 PF06574 FAD synthetase C1J04_RS13310 PF03692 Putative zinc- or iron-chelating domain C1J04_RS13315 PF01212 Beta-eliminating lyase C1J04_RS13320 PF00561 alpha/beta hydrolase fold C1J04_RS13325 PF01323 DSBA-like thioredoxin domain C1J04_RS13330 PF14572 Phosphoribosyl synthetase-associated domain C1J04_RS13330 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C1J04_RS13335 PF09458 H-type lectin domain C1J04_RS13340 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C1J04_RS13345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1J04_RS13345 PF02874 ATP synthase alpha/beta family, beta-barrel domain C1J04_RS13350 PF00231 ATP synthase C1J04_RS13355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1J04_RS13355 PF02874 ATP synthase alpha/beta family, beta-barrel domain C1J04_RS13355 PF00306 ATP synthase alpha/beta chain, C terminal domain C1J04_RS13360 PF00213 ATP synthase delta (OSCP) subunit C1J04_RS13365 PF08241 Methyltransferase domain C1J04_RS13370 PF16123 Hydroxyacylglutathione hydrolase C-terminus C1J04_RS13370 PF00753 Metallo-beta-lactamase superfamily C1J04_RS13375 PF10431 C-terminal, D2-small domain, of ClpB protein C1J04_RS13375 PF00004 ATPase family associated with various cellular activities (AAA) C1J04_RS13375 PF07724 AAA domain (Cdc48 subfamily) C1J04_RS13375 PF02861 Clp amino terminal domain, pathogenicity island component C1J04_RS13375 PF17871 AAA lid domain C1J04_RS13385 PF00691 OmpA family C1J04_RS13385 PF01389 OmpA-like transmembrane domain C1J04_RS13395 PF04752 ChaC-like protein C1J04_RS13410 PF02153 Prephenate dehydrogenase C1J04_RS13415 PF00155 Aminotransferase class I and II C1J04_RS13420 PF00163 Ribosomal protein S4/S9 N-terminal domain C1J04_RS13420 PF01479 S4 domain C1J04_RS13425 PF00072 Response regulator receiver domain C1J04_RS13425 PF00486 Transcriptional regulatory protein, C terminal C1J04_RS13430 PF13673 Acetyltransferase (GNAT) domain C1J04_RS13430 PF13302 Acetyltransferase (GNAT) domain C1J04_RS13430 PF03352 Methyladenine glycosylase C1J04_RS13430 PF00117 Glutamine amidotransferase class-I C1J04_RS13430 PF00958 GMP synthase C terminal domain C1J04_RS13435 PF00563 EAL domain C1J04_RS13435 PF03707 Bacterial signalling protein N terminal repeat C1J04_RS13435 PF00990 Diguanylate cyclase, GGDEF domain C1J04_RS13440 PF00108 Thiolase, N-terminal domain C1J04_RS13440 PF02803 Thiolase, C-terminal domain C1J04_RS13455 PF13847 Methyltransferase domain C1J04_RS13455 PF17827 PrmC N-terminal domain C1J04_RS13465 PF00348 Polyprenyl synthetase C1J04_RS13470 PF00288 GHMP kinases N terminal domain C1J04_RS13470 PF08544 GHMP kinases C terminal C1J04_RS13485 PF09278 MerR, DNA binding C1J04_RS13485 PF00376 MerR family regulatory protein C1J04_RS13495 PF03449 Transcription elongation factor, N-terminal C1J04_RS13495 PF01272 Transcription elongation factor, GreA/GreB, C-term C1J04_RS13505 PF03454 MoeA C-terminal region (domain IV) C1J04_RS13505 PF00994 Probable molybdopterin binding domain C1J04_RS13505 PF03453 MoeA N-terminal region (domain I and II) C1J04_RS13515 PF12804 MobA-like NTP transferase domain C1J04_RS13520 PF02634 FdhD/NarQ family C1J04_RS13555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS13555 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS13555 PF12806 Acetyl-CoA dehydrogenase C-terminal like C1J04_RS13555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS13560 PF01300 Telomere recombination C1J04_RS13560 PF03481 Putative GTP-binding controlling metal-binding C1J04_RS13565 PF02622 Uncharacterized ACR, COG1678 C1J04_RS13575 PF00873 AcrB/AcrD/AcrF family C1J04_RS13585 PF00994 Probable molybdopterin binding domain C1J04_RS13590 PF01810 LysE type translocator C1J04_RS13595 PF03167 Uracil DNA glycosylase superfamily C1J04_RS13600 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C1J04_RS13600 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C1J04_RS13620 PF01979 Amidohydrolase family C1J04_RS13625 PF02660 Glycerol-3-phosphate acyltransferase C1J04_RS13645 PF04452 RNA methyltransferase C1J04_RS13650 PF01040 UbiA prenyltransferase family C1J04_RS13655 PF00691 OmpA family C1J04_RS13655 PF13488 Glycine zipper C1J04_RS13665 PF02391 MoaE protein C1J04_RS13675 PF01066 CDP-alcohol phosphatidyltransferase C1J04_RS13680 PF12826 Helix-hairpin-helix motif C1J04_RS13680 PF02151 UvrB/uvrC motif C1J04_RS13680 PF01541 GIY-YIG catalytic domain C1J04_RS13680 PF08459 UvrC Helix-hairpin-helix N-terminal C1J04_RS13690 PF01699 Sodium/calcium exchanger protein C1J04_RS13695 PF06965 Na+/H+ antiporter 1 C1J04_RS13695 PF01343 Peptidase family S49 C1J04_RS13700 PF01061 ABC-2 type transporter C1J04_RS13705 PF00005 ABC transporter C1J04_RS13715 PF08240 Alcohol dehydrogenase GroES-like domain C1J04_RS13715 PF00698 Acyl transferase domain C1J04_RS13715 PF00109 Beta-ketoacyl synthase, N-terminal domain C1J04_RS13715 PF14765 Polyketide synthase dehydratase C1J04_RS13715 PF02801 Beta-ketoacyl synthase, C-terminal domain C1J04_RS13715 PF08659 KR domain C1J04_RS13715 PF00550 Phosphopantetheine attachment site C1J04_RS13715 PF16197 Ketoacyl-synthetase C-terminal extension C1J04_RS13725 PF02322 Cytochrome bd terminal oxidase subunit II C1J04_RS13730 PF01654 Cytochrome bd terminal oxidase subunit I C1J04_RS13735 PF07689 KaiB domain C1J04_RS13735 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS13735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS13740 PF00486 Transcriptional regulatory protein, C terminal C1J04_RS13740 PF00072 Response regulator receiver domain C1J04_RS13745 PF13180 PDZ domain C1J04_RS13750 PF00465 Iron-containing alcohol dehydrogenase C1J04_RS13755 PF00171 Aldehyde dehydrogenase family C1J04_RS13760 PF03951 Glutamine synthetase, beta-Grasp domain C1J04_RS13760 PF00120 Glutamine synthetase, catalytic domain C1J04_RS13770 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1J04_RS13785 PF01418 Helix-turn-helix domain, rpiR family C1J04_RS13785 PF01380 SIS domain C1J04_RS13790 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C1J04_RS13795 PF16653 Saccharopine dehydrogenase C-terminal domain C1J04_RS13795 PF03435 Saccharopine dehydrogenase NADP binding domain C1J04_RS13805 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS13805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS13805 PF00672 HAMP domain C1J04_RS13810 PF00403 Heavy-metal-associated domain C1J04_RS13810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1J04_RS13810 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1J04_RS13820 PF00468 Ribosomal protein L34 C1J04_RS13825 PF00825 Ribonuclease P C1J04_RS13830 PF01809 Putative membrane protein insertion efficiency factor C1J04_RS13835 PF01171 PP-loop family C1J04_RS13845 PF02096 60Kd inner membrane protein C1J04_RS13845 PF14849 YidC periplasmic domain C1J04_RS13855 PF01926 50S ribosome-binding GTPase C1J04_RS13860 PF00696 Amino acid kinase family C1J04_RS13870 PF00005 ABC transporter C1J04_RS13875 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS13880 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS13885 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1J04_RS13895 PF00849 RNA pseudouridylate synthase C1J04_RS13895 PF01479 S4 domain C1J04_RS13900 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C1J04_RS13905 PF12002 MgsA AAA+ ATPase C terminal C1J04_RS13905 PF00004 ATPase family associated with various cellular activities (AAA) C1J04_RS13905 PF16193 AAA C-terminal domain C1J04_RS13910 PF13180 PDZ domain C1J04_RS13910 PF00595 PDZ domain C1J04_RS13915 PF01196 Ribosomal protein L17 C1J04_RS13920 PF01000 RNA polymerase Rpb3/RpoA insert domain C1J04_RS13920 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C1J04_RS13920 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C1J04_RS13925 PF00411 Ribosomal protein S11 C1J04_RS13930 PF00416 Ribosomal protein S13/S18 C1J04_RS13935 PF05191 Adenylate kinase, active site lid C1J04_RS13940 PF00344 SecY translocase C1J04_RS13945 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C1J04_RS13950 PF00327 Ribosomal protein L30p/L7e C1J04_RS13955 PF00333 Ribosomal protein S5, N-terminal domain C1J04_RS13955 PF03719 Ribosomal protein S5, C-terminal domain C1J04_RS13960 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C1J04_RS13965 PF00347 Ribosomal protein L6 C1J04_RS13970 PF00410 Ribosomal protein S8 C1J04_RS13975 PF00253 Ribosomal protein S14p/S29e C1J04_RS13980 PF00673 ribosomal L5P family C-terminus C1J04_RS13980 PF00281 Ribosomal protein L5 C1J04_RS13985 PF00467 KOW motif C1J04_RS13985 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C1J04_RS13990 PF00238 Ribosomal protein L14p/L23e C1J04_RS13995 PF00366 Ribosomal protein S17 C1J04_RS14000 PF00831 Ribosomal L29 protein C1J04_RS14020 PF00252 Ribosomal protein L16p/L10e C1J04_RS14025 PF00189 Ribosomal protein S3, C-terminal domain C1J04_RS14025 PF07650 KH domain C1J04_RS14030 PF00237 Ribosomal protein L22p/L17e C1J04_RS14035 PF00203 Ribosomal protein S19 C1J04_RS14040 PF03947 Ribosomal Proteins L2, C-terminal domain C1J04_RS14040 PF00181 Ribosomal Proteins L2, RNA binding domain C1J04_RS14050 PF00276 Ribosomal protein L23 C1J04_RS14055 PF00573 Ribosomal protein L4/L1 family C1J04_RS14060 PF00297 Ribosomal protein L3 C1J04_RS14065 PF00338 Ribosomal protein S10p/S20e C1J04_RS14070 PF03143 Elongation factor Tu C-terminal domain C1J04_RS14070 PF03144 Elongation factor Tu domain 2 C1J04_RS14070 PF00009 Elongation factor Tu GTP binding domain C1J04_RS14075 PF00679 Elongation factor G C-terminus C1J04_RS14075 PF03764 Elongation factor G, domain IV C1J04_RS14075 PF00009 Elongation factor Tu GTP binding domain C1J04_RS14075 PF14492 Elongation Factor G, domain II C1J04_RS14075 PF03144 Elongation factor Tu domain 2 C1J04_RS14080 PF00177 Ribosomal protein S7p/S5e C1J04_RS14085 PF00164 Ribosomal protein S12/S23 C1J04_RS14095 PF00892 EamA-like transporter family C1J04_RS14100 PF04997 RNA polymerase Rpb1, domain 1 C1J04_RS14100 PF00623 RNA polymerase Rpb1, domain 2 C1J04_RS14100 PF04998 RNA polymerase Rpb1, domain 5 C1J04_RS14100 PF05000 RNA polymerase Rpb1, domain 4 C1J04_RS14100 PF04983 RNA polymerase Rpb1, domain 3 C1J04_RS14105 PF04560 RNA polymerase Rpb2, domain 7 C1J04_RS14105 PF00562 RNA polymerase Rpb2, domain 6 C1J04_RS14105 PF10385 RNA polymerase beta subunit external 1 domain C1J04_RS14105 PF04565 RNA polymerase Rpb2, domain 3 C1J04_RS14105 PF04561 RNA polymerase Rpb2, domain 2 C1J04_RS14105 PF04563 RNA polymerase beta subunit C1J04_RS14110 PF00542 Ribosomal protein L7/L12 C-terminal domain C1J04_RS14110 PF16320 Ribosomal protein L7/L12 dimerisation domain C1J04_RS14115 PF00466 Ribosomal protein L10 C1J04_RS14120 PF00687 Ribosomal protein L1p/L10e family C1J04_RS14125 PF00298 Ribosomal protein L11, RNA binding domain C1J04_RS14125 PF03946 Ribosomal protein L11, N-terminal domain C1J04_RS14130 PF00467 KOW motif C1J04_RS14130 PF02357 Transcription termination factor nusG C1J04_RS14145 PF03144 Elongation factor Tu domain 2 C1J04_RS14145 PF00009 Elongation factor Tu GTP binding domain C1J04_RS14145 PF03143 Elongation factor Tu C-terminal domain C1J04_RS14160 PF00067 Cytochrome P450 C1J04_RS14165 PF01435 Peptidase family M48 C1J04_RS14175 PF00521 DNA gyrase/topoisomerase IV, subunit A C1J04_RS14175 PF03989 DNA gyrase C-terminal domain, beta-propeller C1J04_RS14185 PF00106 short chain dehydrogenase C1J04_RS14195 PF01923 Cobalamin adenosyltransferase C1J04_RS14200 PF01012 Electron transfer flavoprotein domain C1J04_RS14205 PF00766 Electron transfer flavoprotein FAD-binding domain C1J04_RS14205 PF01012 Electron transfer flavoprotein domain C1J04_RS14215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C1J04_RS14215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C1J04_RS14225 PF00381 PTS HPr component phosphorylation site C1J04_RS14235 PF03668 P-loop ATPase protein family C1J04_RS14245 PF00672 HAMP domain C1J04_RS14245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS14245 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS14245 PF13755 Sensor N-terminal transmembrane domain C1J04_RS14245 PF13756 Stimulus-sensing domain C1J04_RS14250 PF00072 Response regulator receiver domain C1J04_RS14250 PF00486 Transcriptional regulatory protein, C terminal C1J04_RS14255 PF01293 Phosphoenolpyruvate carboxykinase C1J04_RS14270 PF01381 Helix-turn-helix C1J04_RS14280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS14280 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS14280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS14290 PF01527 Transposase C1J04_RS14295 PF05717 IS66 Orf2 like protein C1J04_RS14300 PF13005 zinc-finger binding domain of transposase IS66 C1J04_RS14300 PF03050 Transposase IS66 family C1J04_RS14300 PF13007 Transposase C of IS166 homeodomain C1J04_RS14300 PF13817 IS66 C-terminal element C1J04_RS14305 PF07929 Plasmid pRiA4b ORF-3-like protein C1J04_RS14315 PF02565 Recombination protein O C terminal C1J04_RS14315 PF11967 Recombination protein O N terminal C1J04_RS14325 PF01926 50S ribosome-binding GTPase C1J04_RS14325 PF07650 KH domain C1J04_RS14330 PF14622 Ribonuclease-III-like C1J04_RS14330 PF00035 Double-stranded RNA binding motif C1J04_RS14335 PF10502 Signal peptidase, peptidase S26 C1J04_RS14340 PF01648 4'-phosphopantetheinyl transferase superfamily C1J04_RS14345 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C1J04_RS14355 PF13291 ACT domain C1J04_RS14355 PF04607 Region found in RelA / SpoT proteins C1J04_RS14355 PF02824 TGS domain C1J04_RS14360 PF01192 RNA polymerase Rpb6 C1J04_RS14365 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C1J04_RS14375 PF02401 LytB protein C1J04_RS14385 PF00075 RNase H C1J04_RS14390 PF03458 UPF0126 domain C1J04_RS14400 PF02911 Formyl transferase, C-terminal domain C1J04_RS14400 PF00551 Formyl transferase C1J04_RS14405 PF01327 Polypeptide deformylase C1J04_RS14410 PF01327 Polypeptide deformylase C1J04_RS14415 PF01327 Polypeptide deformylase C1J04_RS14420 PF00155 Aminotransferase class I and II C1J04_RS14430 PF13409 Glutathione S-transferase, N-terminal domain C1J04_RS14435 PF02463 RecF/RecN/SMC N terminal domain C1J04_RS14445 PF00392 Bacterial regulatory proteins, gntR family C1J04_RS14445 PF07729 FCD domain C1J04_RS14450 PF00430 ATP synthase B/B' CF(0) C1J04_RS14455 PF00430 ATP synthase B/B' CF(0) C1J04_RS14460 PF00137 ATP synthase subunit C C1J04_RS14465 PF00119 ATP synthase A chain C1J04_RS14485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1J04_RS14485 PF03466 LysR substrate binding domain C1J04_RS14490 PF02525 Flavodoxin-like fold C1J04_RS14495 PF02881 SRP54-type protein, helical bundle domain C1J04_RS14495 PF02978 Signal peptide binding domain C1J04_RS14495 PF00448 SRP54-type protein, GTPase domain C1J04_RS14505 PF00886 Ribosomal protein S16 C1J04_RS14510 PF05239 PRC-barrel domain C1J04_RS14510 PF01782 RimM N-terminal domain C1J04_RS14515 PF01746 tRNA (Guanine-1)-methyltransferase C1J04_RS14520 PF01259 SAICAR synthetase C1J04_RS14525 PF01245 Ribosomal protein L19 C1J04_RS14530 PF01197 Ribosomal protein L31 C1J04_RS14540 PF10609 NUBPL iron-transfer P-loop NTPase C1J04_RS14540 PF01883 Iron-sulfur cluster assembly protein C1J04_RS14550 PF01557 Fumarylacetoacetate (FAA) hydrolase family C1J04_RS14560 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1J04_RS14580 PF01208 Uroporphyrinogen decarboxylase (URO-D) C1J04_RS14585 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C1J04_RS14585 PF03900 Porphobilinogen deaminase, C-terminal domain C1J04_RS14590 PF02469 Fasciclin domain C1J04_RS14595 PF01218 Coproporphyrinogen III oxidase C1J04_RS14605 PF08468 Methyltransferase small domain N-terminal C1J04_RS14605 PF05175 Methyltransferase small domain C1J04_RS14610 PF02617 ATP-dependent Clp protease adaptor protein ClpS C1J04_RS14620 PF00768 D-alanyl-D-alanine carboxypeptidase C1J04_RS14620 PF07943 Penicillin-binding protein 5, C-terminal domain C1J04_RS14625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1J04_RS14625 PF00005 ABC transporter C1J04_RS14630 PF12911 N-terminal TM domain of oligopeptide transport permease C C1J04_RS14630 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS14635 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS14640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1J04_RS14645 PF00034 Cytochrome c C1J04_RS14650 PF01842 ACT domain C1J04_RS14650 PF00800 Prephenate dehydratase C1J04_RS14660 PF09297 NADH pyrophosphatase zinc ribbon domain C1J04_RS14660 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain C1J04_RS14660 PF00293 NUDIX domain C1J04_RS14670 PF04228 Putative neutral zinc metallopeptidase C1J04_RS14680 PF12170 DNA polymerase III tau subunit V interacting with alpha C1J04_RS14680 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding C1J04_RS14680 PF12169 DNA polymerase III subunits gamma and tau domain III C1J04_RS14685 PF02575 YbaB/EbfC DNA-binding family C1J04_RS14690 PF02132 RecR protein C1J04_RS14690 PF13662 Toprim domain C1J04_RS14695 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C1J04_RS14695 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C1J04_RS14700 PF00300 Histidine phosphatase superfamily (branch 1) C1J04_RS14710 PF03971 Monomeric isocitrate dehydrogenase C1J04_RS14715 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C1J04_RS14715 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C1J04_RS14715 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C1J04_RS14715 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C1J04_RS14720 PF16363 GDP-mannose 4,6 dehydratase C1J04_RS14725 PF01370 NAD dependent epimerase/dehydratase family C1J04_RS14730 PF00483 Nucleotidyl transferase C1J04_RS14730 PF01050 Mannose-6-phosphate isomerase C1J04_RS14735 PF02632 BioY family C1J04_RS14740 PF07685 CobB/CobQ-like glutamine amidotransferase domain C1J04_RS14740 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C1J04_RS14750 PF02492 CobW/HypB/UreG, nucleotide-binding domain C1J04_RS14750 PF07683 Cobalamin synthesis protein cobW C-terminal domain C1J04_RS14755 PF02514 CobN/Magnesium Chelatase C1J04_RS14760 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C1J04_RS14765 PF02570 Precorrin-8X methylmutase C1J04_RS14770 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1J04_RS14775 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1J04_RS14780 PF02571 Precorrin-6x reductase CbiJ/CobK C1J04_RS14785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1J04_RS14795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1J04_RS14800 PF07685 CobB/CobQ-like glutamine amidotransferase domain C1J04_RS14800 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C1J04_RS14805 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1J04_RS14805 PF14824 Sirohaem biosynthesis protein central C1J04_RS14805 PF10414 Sirohaem synthase dimerisation region C1J04_RS14815 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1J04_RS14820 PF00376 MerR family regulatory protein C1J04_RS14820 PF09278 MerR, DNA binding C1J04_RS14825 PF00403 Heavy-metal-associated domain C1J04_RS14835 PF00535 Glycosyl transferase family 2 C1J04_RS14840 PF02397 Bacterial sugar transferase C1J04_RS14850 PF00266 Aminotransferase class-V C1J04_RS14855 PF01842 ACT domain C1J04_RS14855 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1J04_RS14855 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1J04_RS14860 PF00107 Zinc-binding dehydrogenase C1J04_RS14860 PF08240 Alcohol dehydrogenase GroES-like domain C1J04_RS14865 PF00155 Aminotransferase class I and II C1J04_RS14870 PF01381 Helix-turn-helix C1J04_RS14870 PF07883 Cupin domain C1J04_RS14875 PF03109 ABC1 family C1J04_RS14880 PF01209 ubiE/COQ5 methyltransferase family C1J04_RS14885 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C1J04_RS14885 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C1J04_RS14890 PF00378 Enoyl-CoA hydratase/isomerase C1J04_RS14895 PF01649 Ribosomal protein S20 C1J04_RS14900 PF13614 AAA domain C1J04_RS14905 PF02195 ParB-like nuclease domain C1J04_RS14905 PF07506 RepB plasmid partitioning protein C1J04_RS14910 PF03480 Bacterial extracellular solute-binding protein, family 7 C1J04_RS14915 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1J04_RS14945 PF00115 Cytochrome C and Quinol oxidase polypeptide I C1J04_RS14950 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C1J04_RS14950 PF02790 Cytochrome C oxidase subunit II, transmembrane domain C1J04_RS14950 PF00034 Cytochrome c C1J04_RS14955 PF13520 Amino acid permease C1J04_RS14960 PF09335 SNARE associated Golgi protein C1J04_RS14965 PF00034 Cytochrome c C1J04_RS14970 PF00732 GMC oxidoreductase C1J04_RS14970 PF05199 GMC oxidoreductase C1J04_RS14990 PF02308 MgtC family C1J04_RS15000 PF00080 Copper/zinc superoxide dismutase (SODC) C1J04_RS15010 PF00210 Ferritin-like domain C1J04_RS15020 PF00593 TonB dependent receptor C1J04_RS15020 PF07715 TonB-dependent Receptor Plug Domain C1J04_RS15025 PF07690 Major Facilitator Superfamily C1J04_RS15050 PF00378 Enoyl-CoA hydratase/isomerase C1J04_RS15065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1J04_RS15070 PF00873 AcrB/AcrD/AcrF family C1J04_RS15075 PF00881 Nitroreductase family C1J04_RS15080 PF00501 AMP-binding enzyme C1J04_RS15080 PF13193 AMP-binding enzyme C-terminal domain C1J04_RS15085 PF01758 Sodium Bile acid symporter family C1J04_RS15090 PF00890 FAD binding domain C1J04_RS15100 PF03601 Conserved hypothetical protein 698 C1J04_RS15105 PF03466 LysR substrate binding domain C1J04_RS15105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1J04_RS15110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS15110 PF02702 Osmosensitive K+ channel His kinase sensor domain C1J04_RS15110 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS15110 PF13492 GAF domain C1J04_RS15110 PF13493 Domain of unknown function (DUF4118) C1J04_RS15115 PF02979 Nitrile hydratase, alpha chain C1J04_RS15120 PF02211 Nitrile hydratase beta subunit C1J04_RS15130 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1J04_RS15145 PF00440 Bacterial regulatory proteins, tetR family C1J04_RS15150 PF00873 AcrB/AcrD/AcrF family C1J04_RS15170 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS15170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS15195 PF13593 SBF-like CPA transporter family (DUF4137) C1J04_RS15205 PF01970 Tripartite tricarboxylate transporter TctA family C1J04_RS15215 PF03401 Tripartite tricarboxylate transporter family receptor C1J04_RS15220 PF03466 LysR substrate binding domain C1J04_RS15220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1J04_RS15230 PF01638 HxlR-like helix-turn-helix C1J04_RS15250 PF07731 Multicopper oxidase C1J04_RS15250 PF00394 Multicopper oxidase C1J04_RS15250 PF07732 Multicopper oxidase C1J04_RS15265 PF00593 TonB dependent receptor C1J04_RS15265 PF07715 TonB-dependent Receptor Plug Domain C1J04_RS15270 PF05171 Haemin-degrading HemS.ChuX domain C1J04_RS15275 PF01497 Periplasmic binding protein C1J04_RS15280 PF01032 FecCD transport family C1J04_RS15285 PF00005 ABC transporter C1J04_RS15290 PF13426 PAS domain C1J04_RS15290 PF08447 PAS fold C1J04_RS15290 PF07536 HWE histidine kinase C1J04_RS15305 PF03167 Uracil DNA glycosylase superfamily C1J04_RS15315 PF10503 Esterase PHB depolymerase C1J04_RS15325 PF00072 Response regulator receiver domain C1J04_RS15325 PF00196 Bacterial regulatory proteins, luxR family C1J04_RS15345 PF00378 Enoyl-CoA hydratase/isomerase C1J04_RS15360 PF13419 Haloacid dehalogenase-like hydrolase C1J04_RS15365 PF00356 Bacterial regulatory proteins, lacI family C1J04_RS15380 PF03328 HpcH/HpaI aldolase/citrate lyase family C1J04_RS15385 PF00815 Histidinol dehydrogenase C1J04_RS15395 PF00890 FAD binding domain C1J04_RS15395 PF02910 Fumarate reductase flavoprotein C-term C1J04_RS15410 PF05378 Hydantoinase/oxoprolinase N-terminal region C1J04_RS15410 PF01968 Hydantoinase/oxoprolinase C1J04_RS15415 PF02538 Hydantoinase B/oxoprolinase C1J04_RS15425 PF00392 Bacterial regulatory proteins, gntR family C1J04_RS15425 PF07702 UTRA domain C1J04_RS15430 PF00330 Aconitase family (aconitate hydratase) C1J04_RS15435 PF00694 Aconitase C-terminal domain C1J04_RS15440 PF03480 Bacterial extracellular solute-binding protein, family 7 C1J04_RS15450 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1J04_RS15455 PF00440 Bacterial regulatory proteins, tetR family C1J04_RS15455 PF08361 MAATS-type transcriptional repressor, C-terminal region C1J04_RS15465 PF00873 AcrB/AcrD/AcrF family C1J04_RS15475 PF00665 Integrase core domain C1J04_RS15480 PF01695 IstB-like ATP binding protein C1J04_RS15485 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain C1J04_RS15485 PF00589 Phage integrase family C1J04_RS15560 PF01527 Transposase C1J04_RS15570 PF13005 zinc-finger binding domain of transposase IS66 C1J04_RS15570 PF13007 Transposase C of IS166 homeodomain C1J04_RS15570 PF03050 Transposase IS66 family C1J04_RS15570 PF13817 IS66 C-terminal element C1J04_RS15640 PF00665 Integrase core domain C1J04_RS15645 PF01695 IstB-like ATP binding protein C1J04_RS15665 PF13936 Helix-turn-helix domain C1J04_RS15665 PF00665 Integrase core domain C1J04_RS15670 PF13936 Helix-turn-helix domain C1J04_RS15675 PF01548 Transposase C1J04_RS15675 PF02371 Transposase IS116/IS110/IS902 family C1J04_RS15680 PF16123 Hydroxyacylglutathione hydrolase C-terminus C1J04_RS15680 PF00753 Metallo-beta-lactamase superfamily C1J04_RS15685 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS15685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS15685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS15690 PF02785 Biotin carboxylase C-terminal domain C1J04_RS15690 PF00289 Biotin carboxylase, N-terminal domain C1J04_RS15690 PF00364 Biotin-requiring enzyme C1J04_RS15690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1J04_RS15695 PF00378 Enoyl-CoA hydratase/isomerase C1J04_RS15700 PF01039 Carboxyl transferase domain C1J04_RS15715 PF01039 Carboxyl transferase domain C1J04_RS15720 PF00682 HMGL-like C1J04_RS15720 PF00364 Biotin-requiring enzyme C1J04_RS15720 PF02436 Conserved carboxylase domain C1J04_RS15725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1J04_RS15725 PF00364 Biotin-requiring enzyme C1J04_RS15725 PF00289 Biotin carboxylase, N-terminal domain C1J04_RS15725 PF02785 Biotin carboxylase C-terminal domain C1J04_RS15735 PF00378 Enoyl-CoA hydratase/isomerase C1J04_RS15740 PF01039 Carboxyl transferase domain C1J04_RS15750 PF00289 Biotin carboxylase, N-terminal domain C1J04_RS15750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1J04_RS15750 PF00364 Biotin-requiring enzyme C1J04_RS15750 PF02785 Biotin carboxylase C-terminal domain C1J04_RS15755 PF13458 Periplasmic binding protein C1J04_RS15760 PF11862 Domain of unknown function (DUF3382) C1J04_RS15760 PF02653 Branched-chain amino acid transport system / permease component C1J04_RS15765 PF02653 Branched-chain amino acid transport system / permease component C1J04_RS15770 PF00501 AMP-binding enzyme C1J04_RS15775 PF00005 ABC transporter C1J04_RS15775 PF12399 Branched-chain amino acid ATP-binding cassette transporter C1J04_RS15780 PF00005 ABC transporter C1J04_RS15790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS15790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS15790 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS15795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS15795 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS15795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS15805 PF00378 Enoyl-CoA hydratase/isomerase C1J04_RS15820 PF00440 Bacterial regulatory proteins, tetR family C1J04_RS15830 PF05368 NmrA-like family C1J04_RS15845 PF03358 NADPH-dependent FMN reductase C1J04_RS15850 PF07929 Plasmid pRiA4b ORF-3-like protein C1J04_RS15855 PF03050 Transposase IS66 family C1J04_RS15855 PF13817 IS66 C-terminal element C1J04_RS15855 PF13005 zinc-finger binding domain of transposase IS66 C1J04_RS15855 PF13007 Transposase C of IS166 homeodomain C1J04_RS15860 PF05717 IS66 Orf2 like protein C1J04_RS15865 PF01527 Transposase C1J04_RS15870 PF13193 AMP-binding enzyme C-terminal domain C1J04_RS15870 PF00501 AMP-binding enzyme C1J04_RS15875 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1J04_RS15875 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C1J04_RS15880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS15880 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS15880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS15885 PF00378 Enoyl-CoA hydratase/isomerase C1J04_RS15890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS15890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS15890 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS15895 PF14535 AMP-binding enzyme C-terminal domain C1J04_RS15895 PF00501 AMP-binding enzyme C1J04_RS15900 PF01039 Carboxyl transferase domain C1J04_RS15905 PF00364 Biotin-requiring enzyme C1J04_RS15905 PF00289 Biotin carboxylase, N-terminal domain C1J04_RS15905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1J04_RS15905 PF02785 Biotin carboxylase C-terminal domain C1J04_RS15910 PF00682 HMGL-like C1J04_RS15915 PF00106 short chain dehydrogenase C1J04_RS15925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS15925 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS15925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS15935 PF00005 ABC transporter C1J04_RS15935 PF12399 Branched-chain amino acid ATP-binding cassette transporter C1J04_RS15940 PF00501 AMP-binding enzyme C1J04_RS15945 PF02653 Branched-chain amino acid transport system / permease component C1J04_RS15950 PF11862 Domain of unknown function (DUF3382) C1J04_RS15950 PF02653 Branched-chain amino acid transport system / permease component C1J04_RS15960 PF00005 ABC transporter C1J04_RS15970 PF02515 CoA-transferase family III C1J04_RS15975 PF00378 Enoyl-CoA hydratase/isomerase C1J04_RS15985 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS15985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS15985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS16005 PF07929 Plasmid pRiA4b ORF-3-like protein C1J04_RS16010 PF13817 IS66 C-terminal element C1J04_RS16010 PF13007 Transposase C of IS166 homeodomain C1J04_RS16010 PF03050 Transposase IS66 family C1J04_RS16010 PF13005 zinc-finger binding domain of transposase IS66 C1J04_RS16015 PF05717 IS66 Orf2 like protein C1J04_RS16020 PF01527 Transposase C1J04_RS16030 PF13607 Succinyl-CoA ligase like flavodoxin domain C1J04_RS16030 PF13380 CoA binding domain C1J04_RS16035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS16035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS16035 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS16040 PF02515 CoA-transferase family III C1J04_RS16060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS16060 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS16060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS16065 PF02803 Thiolase, C-terminal domain C1J04_RS16065 PF00108 Thiolase, N-terminal domain C1J04_RS16075 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1J04_RS16090 PF01144 Coenzyme A transferase C1J04_RS16110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS16110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS16110 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS16115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS16115 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS16115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS16130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS16130 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS16130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS16135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS16135 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS16135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS16165 PF00108 Thiolase, N-terminal domain C1J04_RS16165 PF02803 Thiolase, C-terminal domain C1J04_RS16180 PF00378 Enoyl-CoA hydratase/isomerase C1J04_RS16185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS16185 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS16185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS16190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS16190 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS16190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS16195 PF01575 MaoC like domain C1J04_RS16205 PF02515 CoA-transferase family III C1J04_RS16210 PF01575 MaoC like domain C1J04_RS16215 PF02803 Thiolase, C-terminal domain C1J04_RS16215 PF00108 Thiolase, N-terminal domain C1J04_RS16225 PF02515 CoA-transferase family III C1J04_RS16230 PF02515 CoA-transferase family III C1J04_RS16235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS16235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS16235 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS16240 PF07929 Plasmid pRiA4b ORF-3-like protein C1J04_RS16245 PF13005 zinc-finger binding domain of transposase IS66 C1J04_RS16245 PF03050 Transposase IS66 family C1J04_RS16245 PF13817 IS66 C-terminal element C1J04_RS16245 PF13007 Transposase C of IS166 homeodomain C1J04_RS16250 PF05717 IS66 Orf2 like protein C1J04_RS16255 PF01527 Transposase C1J04_RS16260 PF00378 Enoyl-CoA hydratase/isomerase C1J04_RS16265 PF00378 Enoyl-CoA hydratase/isomerase C1J04_RS16280 PF00005 ABC transporter C1J04_RS16285 PF02653 Branched-chain amino acid transport system / permease component C1J04_RS16285 PF11862 Domain of unknown function (DUF3382) C1J04_RS16290 PF02653 Branched-chain amino acid transport system / permease component C1J04_RS16295 PF00501 AMP-binding enzyme C1J04_RS16300 PF12399 Branched-chain amino acid ATP-binding cassette transporter C1J04_RS16300 PF00005 ABC transporter C1J04_RS16315 PF02515 CoA-transferase family III C1J04_RS16320 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C1J04_RS16325 PF00111 2Fe-2S iron-sulfur cluster binding domain C1J04_RS16325 PF01799 [2Fe-2S] binding domain C1J04_RS16335 PF01047 MarR family C1J04_RS16350 PF01695 IstB-like ATP binding protein C1J04_RS16355 PF00665 Integrase core domain C1J04_RS16375 PF01593 Flavin containing amine oxidoreductase C1J04_RS16390 PF03466 LysR substrate binding domain C1J04_RS16390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1J04_RS16400 PF05717 IS66 Orf2 like protein C1J04_RS16410 PF02371 Transposase IS116/IS110/IS902 family C1J04_RS16410 PF01548 Transposase C1J04_RS16440 PF00239 Resolvase, N terminal domain C1J04_RS16440 PF02796 Helix-turn-helix domain of resolvase C1J04_RS16450 PF01695 IstB-like ATP binding protein C1J04_RS16455 PF00665 Integrase core domain C1J04_RS16460 PF00005 ABC transporter C1J04_RS16460 PF00571 CBS domain C1J04_RS16465 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS16475 PF12399 Branched-chain amino acid ATP-binding cassette transporter C1J04_RS16475 PF00005 ABC transporter C1J04_RS16480 PF00005 ABC transporter C1J04_RS16490 PF02653 Branched-chain amino acid transport system / permease component C1J04_RS16495 PF02653 Branched-chain amino acid transport system / permease component C1J04_RS16500 PF00732 GMC oxidoreductase C1J04_RS16500 PF05199 GMC oxidoreductase C1J04_RS16505 PF00501 AMP-binding enzyme C1J04_RS16505 PF13193 AMP-binding enzyme C-terminal domain C1J04_RS16515 PF00440 Bacterial regulatory proteins, tetR family C1J04_RS16520 PF03480 Bacterial extracellular solute-binding protein, family 7 C1J04_RS16525 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1J04_RS16535 PF03466 LysR substrate binding domain C1J04_RS16535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1J04_RS16550 PF00571 CBS domain C1J04_RS16550 PF01743 Poly A polymerase head domain C1J04_RS16555 PF03358 NADPH-dependent FMN reductase C1J04_RS16565 PF01527 Transposase C1J04_RS16565 PF00665 Integrase core domain C1J04_RS16565 PF13276 HTH-like domain C1J04_RS16565 PF13333 Integrase core domain C1J04_RS16575 PF00665 Integrase core domain C1J04_RS16580 PF01695 IstB-like ATP binding protein C1J04_RS16590 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C1J04_RS16590 PF14579 Helix-hairpin-helix motif C1J04_RS16590 PF01336 OB-fold nucleic acid binding domain C1J04_RS16590 PF07733 Bacterial DNA polymerase III alpha NTPase domain C1J04_RS16590 PF02811 PHP domain C1J04_RS16635 PF07687 Peptidase dimerisation domain C1J04_RS16635 PF01546 Peptidase family M20/M25/M40 C1J04_RS16640 PF01546 Peptidase family M20/M25/M40 C1J04_RS16640 PF07687 Peptidase dimerisation domain C1J04_RS16645 PF00005 ABC transporter C1J04_RS16645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1J04_RS16650 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS16655 PF00528 Binding-protein-dependent transport system inner membrane component C1J04_RS16660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1J04_RS16680 PF13614 AAA domain C1J04_RS16680 PF00376 MerR family regulatory protein C1J04_RS16700 PF00043 Glutathione S-transferase, C-terminal domain C1J04_RS16700 PF02798 Glutathione S-transferase, N-terminal domain C1J04_RS16710 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1J04_RS16710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1J04_RS16710 PF00205 Thiamine pyrophosphate enzyme, central domain C1J04_RS16720 PF00067 Cytochrome P450 C1J04_RS16735 PF00171 Aldehyde dehydrogenase family C1J04_RS16740 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C1J04_RS16740 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C1J04_RS16745 PF03480 Bacterial extracellular solute-binding protein, family 7 C1J04_RS16755 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1J04_RS16760 PF00140 Sigma-70 factor, region 1.2 C1J04_RS16760 PF04542 Sigma-70 region 2 C1J04_RS16760 PF04539 Sigma-70 region 3 C1J04_RS16760 PF04545 Sigma-70, region 4 C1J04_RS16780 PF02107 Flagellar L-ring protein C1J04_RS16790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C1J04_RS16790 PF00460 Flagella basal body rod protein C1J04_RS16795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C1J04_RS16795 PF00460 Flagella basal body rod protein C1J04_RS16805 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C1J04_RS16805 PF00460 Flagella basal body rod protein C1J04_RS16805 PF07559 Flagellar basal body protein FlaE C1J04_RS16820 PF00486 Transcriptional regulatory protein, C terminal C1J04_RS16820 PF00072 Response regulator receiver domain C1J04_RS16825 PF02119 Flagellar P-ring protein C1J04_RS16840 PF00669 Bacterial flagellin N-terminal helical region C1J04_RS16840 PF00700 Bacterial flagellin C-terminal helical region C1J04_RS16845 PF18269 T3SS EscN ATPase C-terminal domain C1J04_RS16845 PF02874 ATP synthase alpha/beta family, beta-barrel domain C1J04_RS16845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1J04_RS16855 PF00460 Flagella basal body rod protein C1J04_RS16855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C1J04_RS16860 PF02049 Flagellar hook-basal body complex protein FliE C1J04_RS16865 PF01313 Bacterial export proteins, family 3 C1J04_RS16875 PF00771 FHIPEP family C1J04_RS16885 PF01312 FlhB HrpN YscU SpaS Family C1J04_RS16900 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C1J04_RS16900 PF02154 Flagellar motor switch protein FliM C1J04_RS16910 PF01514 Secretory protein of YscJ/FliF family C1J04_RS16910 PF08345 Flagellar M-ring protein C-terminal C1J04_RS16920 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C1J04_RS16925 PF00813 FliP family C1J04_RS16930 PF14841 FliG middle domain C1J04_RS16930 PF14842 FliG N-terminal domain C1J04_RS16930 PF01706 FliG C-terminal domain C1J04_RS16940 PF07378 Flagellar protein FlbT C1J04_RS16965 PF05443 ROS/MUCR transcriptional regulator protein C1J04_RS16970 PF13677 Membrane MotB of proton-channel complex MotA/MotB C1J04_RS16970 PF00691 OmpA family C1J04_RS16980 PF01618 MotA/TolQ/ExbB proton channel family C1J04_RS16990 PF13426 PAS domain C1J04_RS16990 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS16990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS16990 PF00672 HAMP domain C1J04_RS17030 PF01494 FAD binding domain C1J04_RS17040 PF00072 Response regulator receiver domain C1J04_RS17040 PF00486 Transcriptional regulatory protein, C terminal C1J04_RS17045 PF01263 Aldose 1-epimerase C1J04_RS17055 PF07690 Major Facilitator Superfamily C1J04_RS17060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1J04_RS17060 PF00529 HlyD membrane-fusion protein of T1SS C1J04_RS17065 PF00873 AcrB/AcrD/AcrF family C1J04_RS17070 PF00111 2Fe-2S iron-sulfur cluster binding domain C1J04_RS17070 PF01799 [2Fe-2S] binding domain C1J04_RS17075 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C1J04_RS17085 PF01575 MaoC like domain C1J04_RS17090 PF16884 N-terminal domain of oxidoreductase C1J04_RS17090 PF00107 Zinc-binding dehydrogenase C1J04_RS17095 PF00107 Zinc-binding dehydrogenase C1J04_RS17095 PF08240 Alcohol dehydrogenase GroES-like domain C1J04_RS17095 PF16197 Ketoacyl-synthetase C-terminal extension C1J04_RS17095 PF00109 Beta-ketoacyl synthase, N-terminal domain C1J04_RS17095 PF00698 Acyl transferase domain C1J04_RS17095 PF02801 Beta-ketoacyl synthase, C-terminal domain C1J04_RS17095 PF08659 KR domain C1J04_RS17095 PF00550 Phosphopantetheine attachment site C1J04_RS17095 PF14765 Polyketide synthase dehydratase C1J04_RS17100 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS17100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS17100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS17105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS17105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS17115 PF00106 short chain dehydrogenase C1J04_RS17120 PF02803 Thiolase, C-terminal domain C1J04_RS17120 PF00108 Thiolase, N-terminal domain C1J04_RS17125 PF00300 Histidine phosphatase superfamily (branch 1) C1J04_RS17135 PF09339 IclR helix-turn-helix domain C1J04_RS17140 PF13458 Periplasmic binding protein C1J04_RS17145 PF02653 Branched-chain amino acid transport system / permease component C1J04_RS17155 PF00005 ABC transporter C1J04_RS17155 PF12399 Branched-chain amino acid ATP-binding cassette transporter C1J04_RS17160 PF00005 ABC transporter C1J04_RS17165 PF00144 Beta-lactamase C1J04_RS17170 PF13193 AMP-binding enzyme C-terminal domain C1J04_RS17170 PF00501 AMP-binding enzyme C1J04_RS17190 PF00106 short chain dehydrogenase C1J04_RS17200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1J04_RS17200 PF02770 Acyl-CoA dehydrogenase, middle domain C1J04_RS17200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1J04_RS17205 PF00378 Enoyl-CoA hydratase/isomerase C1J04_RS17210 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C1J04_RS17210 PF00378 Enoyl-CoA hydratase/isomerase C1J04_RS17210 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C1J04_RS17215 PF13193 AMP-binding enzyme C-terminal domain C1J04_RS17215 PF00501 AMP-binding enzyme C1J04_RS17220 PF01979 Amidohydrolase family C1J04_RS17225 PF00175 Oxidoreductase NAD-binding domain C1J04_RS17225 PF00970 Oxidoreductase FAD-binding domain C1J04_RS17230 PF00941 FAD binding domain in molybdopterin dehydrogenase C1J04_RS17230 PF03450 CO dehydrogenase flavoprotein C-terminal domain C1J04_RS17235 PF00111 2Fe-2S iron-sulfur cluster binding domain C1J04_RS17235 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C1J04_RS17235 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C1J04_RS17235 PF01799 [2Fe-2S] binding domain C1J04_RS17240 PF00037 4Fe-4S binding domain C1J04_RS17265 PF00355 Rieske [2Fe-2S] domain C1J04_RS17270 PF13458 Periplasmic binding protein C1J04_RS17275 PF02653 Branched-chain amino acid transport system / permease component C1J04_RS17280 PF00005 ABC transporter C1J04_RS17280 PF12399 Branched-chain amino acid ATP-binding cassette transporter C1J04_RS17285 PF00005 ABC transporter C1J04_RS17295 PF07690 Major Facilitator Superfamily C1J04_RS17305 PF13936 Helix-turn-helix domain C1J04_RS17315 PF01494 FAD binding domain C1J04_RS17325 PF04209 homogentisate 1,2-dioxygenase C1J04_RS17330 PF13439 Glycosyltransferase Family 4 C1J04_RS17330 PF00534 Glycosyl transferases group 1 C1J04_RS17350 PF03597 Cytochrome oxidase maturation protein cbb3-type C1J04_RS17355 PF00403 Heavy-metal-associated domain C1J04_RS17365 PF13746 4Fe-4S dicluster domain C1J04_RS17365 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase C1J04_RS17365 PF12801 4Fe-4S binding domain C1J04_RS17370 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C1J04_RS17370 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C1J04_RS17385 PF00115 Cytochrome C and Quinol oxidase polypeptide I C1J04_RS17390 PF00294 pfkB family carbohydrate kinase C1J04_RS17395 PF03786 D-mannonate dehydratase (UxuA) C1J04_RS17400 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1J04_RS17400 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component C1J04_RS17410 PF03480 Bacterial extracellular solute-binding protein, family 7 C1J04_RS17415 PF00171 Aldehyde dehydrogenase family C1J04_RS17430 PF07729 FCD domain C1J04_RS17430 PF00392 Bacterial regulatory proteins, gntR family C1J04_RS17435 PF03737 Aldolase/RraA C1J04_RS17440 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1J04_RS17450 PF03480 Bacterial extracellular solute-binding protein, family 7 C1J04_RS17465 PF00034 Cytochrome c C1J04_RS17475 PF04542 Sigma-70 region 2 C1J04_RS17475 PF08281 Sigma-70, region 4 C1J04_RS17480 PF00072 Response regulator receiver domain C1J04_RS17480 PF00486 Transcriptional regulatory protein, C terminal C1J04_RS17485 PF00672 HAMP domain C1J04_RS17485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS17485 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS17485 PF00989 PAS fold C1J04_RS17490 PF00672 HAMP domain C1J04_RS17490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1J04_RS17490 PF00512 His Kinase A (phospho-acceptor) domain C1J04_RS17490 PF13426 PAS domain C1J04_RS17495 PF13660 Domain of unknown function (DUF4147) C1J04_RS17495 PF05161 MOFRL family C1J04_RS17505 PF02803 Thiolase, C-terminal domain C1J04_RS17505 PF00108 Thiolase, N-terminal domain C1J04_RS17510 PF00106 short chain dehydrogenase C1J04_RS17520 PF13614 AAA domain C1J04_RS17555 PF00239 Resolvase, N terminal domain C1J04_RS17555 PF02796 Helix-turn-helix domain of resolvase C1J04_RS17560 PF01526 Tn3 transposase DDE domain C1J04_RS17560 PF13700 Domain of unknown function (DUF4158) C1J04_RS17565 PF01548 Transposase C1J04_RS17565 PF02371 Transposase IS116/IS110/IS902 family C1J04_RS17600 PF00872 Transposase, Mutator family C1J04_RS17605 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1J04_RS17620 PF01252 Signal peptidase (SPase) II C1J04_RS17630 PF01022 Bacterial regulatory protein, arsR family C1J04_RS17640 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C1J04_RS17680 PF01638 HxlR-like helix-turn-helix C1J04_RS17690 PF02899 Phage integrase, N-terminal SAM-like domain C1J04_RS17690 PF00589 Phage integrase family C1J04_RS17695 PF02810 SEC-C motif C1J04_RS17695 PF03695 Uncharacterised protein family (UPF0149) C1J04_RS17725 PF03432 Relaxase/Mobilisation nuclease domain C1J04_RS17730 PF02534 Type IV secretory system Conjugative DNA transfer C1J04_RS17735 PF00872 Transposase, Mutator family C1J04_RS17760 PF07690 Major Facilitator Superfamily C1J04_RS17765 PF02583 Metal-sensitive transcriptional repressor C1J04_RS17795 PF00403 Heavy-metal-associated domain C1J04_RS17805 PF03734 L,D-transpeptidase catalytic domain C1J04_RS17815 PF01804 Penicillin amidase C1J04_RS17820 PF00795 Carbon-nitrogen hydrolase C1J04_RS17825 PF07929 Plasmid pRiA4b ORF-3-like protein C1J04_RS17830 PF13005 zinc-finger binding domain of transposase IS66 C1J04_RS17830 PF13007 Transposase C of IS166 homeodomain C1J04_RS17830 PF13817 IS66 C-terminal element C1J04_RS17830 PF03050 Transposase IS66 family C1J04_RS17835 PF05717 IS66 Orf2 like protein C1J04_RS17840 PF01527 Transposase C1J04_RS17845 PF01252 Signal peptidase (SPase) II C1J04_RS17850 PF02535 ZIP Zinc transporter C1J04_RS17865 PF02630 SCO1/SenC C1J04_RS17880 PF02600 Disulfide bond formation protein DsbB C1J04_RS17885 PF02630 SCO1/SenC C1J04_RS17890 PF13411 MerR HTH family regulatory protein C1J04_RS17905 PF01545 Cation efflux family C1J04_RS17935 PF07732 Multicopper oxidase C1J04_RS17935 PF07731 Multicopper oxidase C1J04_RS17945 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C1J04_RS17945 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C1J04_RS17950 PF08534 Redoxin C1J04_RS17955 PF08534 Redoxin C1J04_RS17980 PF02683 Cytochrome C biogenesis protein transmembrane region C1J04_RS17995 PF09278 MerR, DNA binding C1J04_RS17995 PF00376 MerR family regulatory protein C1J04_RS18000 PF00403 Heavy-metal-associated domain C1J04_RS18055 PF00873 AcrB/AcrD/AcrF family C1J04_RS18075 PF04945 YHS domain C1J04_RS18105 PF01551 Peptidase family M23 C1J04_RS18105 PF10145 Phage-related minor tail protein C1J04_RS18105 PF01464 Transglycosylase SLT domain C1J04_RS18125 PF01551 Peptidase family M23 C1J04_RS18125 PF10145 Phage-related minor tail protein C1J04_RS18125 PF01464 Transglycosylase SLT domain C1J04_RS18145 PF03743 Bacterial conjugation TrbI-like protein C1J04_RS18150 PF00437 Type II/IV secretion system protein C1J04_RS18185 PF00872 Transposase, Mutator family C1J04_RS18195 PF05275 Copper resistance protein B precursor (CopB) C1J04_RS18200 PF07732 Multicopper oxidase C1J04_RS18200 PF00394 Multicopper oxidase C1J04_RS18200 PF07731 Multicopper oxidase C1J04_RS18230 PF00665 Integrase core domain C1J04_RS18230 PF13936 Helix-turn-helix domain C1J04_RS18240 PF00239 Resolvase, N terminal domain C1J04_RS18245 PF00376 MerR family regulatory protein C1J04_RS18245 PF13614 AAA domain C1J04_RS18250 PF07506 RepB plasmid partitioning protein C1J04_RS18250 PF02195 ParB-like nuclease domain C1J04_RS18255 PF11800 Replication protein C C-terminal region C1J04_RS18255 PF03428 Replication protein C N-terminal domain C1J04_RS18275 PF13657 HipA N-terminal domain C1J04_RS18275 PF07804 HipA-like C-terminal domain C1J04_RS18300 PF03432 Relaxase/Mobilisation nuclease domain C1J04_RS18305 PF02534 Type IV secretory system Conjugative DNA transfer C1J04_RS18315 PF13007 Transposase C of IS166 homeodomain C1J04_RS18315 PF13817 IS66 C-terminal element C1J04_RS18315 PF03050 Transposase IS66 family C1J04_RS18315 PF13005 zinc-finger binding domain of transposase IS66 C1J04_RS18325 PF13700 Domain of unknown function (DUF4158) C1J04_RS18325 PF01526 Tn3 transposase DDE domain C1J04_RS18330 PF02796 Helix-turn-helix domain of resolvase C1J04_RS18330 PF00239 Resolvase, N terminal domain C1J04_RS18345 PF05717 IS66 Orf2 like protein C1J04_RS18370 PF00437 Type II/IV secretion system protein C1J04_RS18375 PF03743 Bacterial conjugation TrbI-like protein C1J04_RS18385 PF04335 VirB8 protein C1J04_RS18405 PF01551 Peptidase family M23 C1J04_RS18405 PF10145 Phage-related minor tail protein C1J04_RS18405 PF01464 Transglycosylase SLT domain C1J04_RS18415 PF03135 CagE, TrbE, VirB family, component of type IV transporter system C1J04_RS18430 PF10145 Phage-related minor tail protein C1J04_RS18430 PF01464 Transglycosylase SLT domain C1J04_RS18430 PF01551 Peptidase family M23 C1J04_RS18500 PF00239 Resolvase, N terminal domain C1J04_RS18500 PF02796 Helix-turn-helix domain of resolvase C1J04_RS18505 PF01526 Tn3 transposase DDE domain C1J04_RS18505 PF13700 Domain of unknown function (DUF4158) C1J04_RS18520 PF01551 Peptidase family M23 C1J04_RS18525 PF13411 MerR HTH family regulatory protein C1J04_RS18535 PF01545 Cation efflux family C1J04_RS18545 PF03734 L,D-transpeptidase catalytic domain C1J04_RS18550 PF03734 L,D-transpeptidase catalytic domain C1J04_RS18555 PF02321 Outer membrane efflux protein C1J04_RS18565 PF01526 Tn3 transposase DDE domain C1J04_RS18565 PF13700 Domain of unknown function (DUF4158) C1J04_RS18570 PF00239 Resolvase, N terminal domain C1J04_RS18570 PF02796 Helix-turn-helix domain of resolvase C1J04_RS18575 PF00873 AcrB/AcrD/AcrF family C1J04_RS18630 PF00403 Heavy-metal-associated domain C1J04_RS18635 PF00239 Resolvase, N terminal domain C1J04_RS18635 PF02796 Helix-turn-helix domain of resolvase C1J04_RS18640 PF13700 Domain of unknown function (DUF4158) C1J04_RS18640 PF01526 Tn3 transposase DDE domain C1J04_RS18645 PF00239 Resolvase, N terminal domain C1J04_RS18645 PF02796 Helix-turn-helix domain of resolvase C1J04_RS18655 PF05717 IS66 Orf2 like protein C1J04_RS18660 PF03050 Transposase IS66 family C1J04_RS18660 PF13817 IS66 C-terminal element C1J04_RS18660 PF13007 Transposase C of IS166 homeodomain C1J04_RS18660 PF13005 zinc-finger binding domain of transposase IS66 C1J04_RS18685 PF18339 RapA N-terminal Tudor like domain 1 C1J04_RS18685 PF00176 SNF2 family N-terminal domain C1J04_RS18685 PF12137 RNA polymerase recycling family C-terminal C1J04_RS18685 PF18337 RapA N-terminal Tudor like domain C1J04_RS18685 PF00271 Helicase conserved C-terminal domain C1J04_RS18690 PF02195 ParB-like nuclease domain C1J04_RS18715 PF00872 Transposase, Mutator family C1J04_RS18730 PF13614 AAA domain C1J04_RS18740 PF11800 Replication protein C C-terminal region C1J04_RS18740 PF03428 Replication protein C N-terminal domain C1J04_RS18745 PF02195 ParB-like nuclease domain C1J04_RS18765 PF00436 Single-strand binding protein family C1J04_RS18785 PF04002 RadC-like JAB domain C1J04_RS18805 PF00589 Phage integrase family C1J04_RS18805 PF18644 Phage integrase SAM-like domain C1J04_RS18860 PF05406 WGR domain C1J04_RS18870 PF01527 Transposase C1J04_RS18875 PF00589 Phage integrase family C1J04_RS18875 PF02899 Phage integrase, N-terminal SAM-like domain C1J04_RS18880 PF02899 Phage integrase, N-terminal SAM-like domain C1J04_RS18880 PF00589 Phage integrase family C1J04_RS18885 PF00589 Phage integrase family C1J04_RS18885 PF02899 Phage integrase, N-terminal SAM-like domain C1J04_RS18890 PF05717 IS66 Orf2 like protein C1J04_RS18895 PF13817 IS66 C-terminal element C1J04_RS18895 PF13007 Transposase C of IS166 homeodomain C1J04_RS18895 PF13005 zinc-finger binding domain of transposase IS66 C1J04_RS18895 PF03050 Transposase IS66 family C1J04_RS18900 PF05717 IS66 Orf2 like protein C1J04_RS18910 PF01695 IstB-like ATP binding protein C1J04_RS18915 PF00665 Integrase core domain C1J04_RS18930 PF01545 Cation efflux family C1J04_RS18945 PF13411 MerR HTH family regulatory protein C1J04_RS18950 PF02630 SCO1/SenC C1J04_RS18955 PF02321 Outer membrane efflux protein C1J04_RS18975 PF00873 AcrB/AcrD/AcrF family C1J04_RS18985 PF00239 Resolvase, N terminal domain C1J04_RS18985 PF02796 Helix-turn-helix domain of resolvase C1J04_RS19015 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C1J04_RS19030 PF00146 NADH dehydrogenase C1J04_RS19040 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C1J04_RS19045 PF00361 Proton-conducting membrane transporter C1J04_RS19045 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C1J04_RS19050 PF00361 Proton-conducting membrane transporter C1J04_RS19055 PF00361 Proton-conducting membrane transporter C1J04_RS19070 PF00072 Response regulator receiver domain C1J04_RS19070 PF00486 Transcriptional regulatory protein, C terminal C1J04_RS19090 PF05275 Copper resistance protein B precursor (CopB) C1J04_RS19095 PF07732 Multicopper oxidase C1J04_RS19095 PF07731 Multicopper oxidase C1J04_RS19095 PF00394 Multicopper oxidase C1J04_RS19100 PF13610 DDE domain C1J04_RS19110 PF00872 Transposase, Mutator family C1J04_RS19150 PF13005 zinc-finger binding domain of transposase IS66 C1J04_RS19150 PF13007 Transposase C of IS166 homeodomain C1J04_RS19150 PF13817 IS66 C-terminal element C1J04_RS19150 PF03050 Transposase IS66 family C1J04_RS19190 PF00361 Proton-conducting membrane transporter C1J04_RS19195 PF00361 Proton-conducting membrane transporter C1J04_RS19215 PF00589 Phage integrase family C1J04_RS19220 PF00239 Resolvase, N terminal domain C1J04_RS19225 PF10134 Replication initiator protein A C1J04_RS19240 PF03389 MobA/MobL family C1J04_RS19260 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH