SCL_RS00045	PWY-2201	folate transformations I
SCL_RS00045	PWY-3841	folate transformations II
SCL_RS00050	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
SCL_RS00055	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
SCL_RS00055	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
SCL_RS00130	PWY-6825	phosphatidylcholine biosynthesis V
SCL_RS00205	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
SCL_RS00210	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
SCL_RS00215	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
SCL_RS00215	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
SCL_RS00265	PWY-40	putrescine biosynthesis I
SCL_RS00265	PWY-43	putrescine biosynthesis II
SCL_RS00265	PWY-6305	putrescine biosynthesis IV
SCL_RS00265	PWY-6834	spermidine biosynthesis III
SCL_RS00315	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SCL_RS00320	PWY-6164	3-dehydroquinate biosynthesis I
SCL_RS00340	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
SCL_RS00340	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
SCL_RS00340	PWY-7766	SCL_RS00340
SCL_RS00385	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
SCL_RS00470	PWY-5506	methanol oxidation to formaldehyde IV
SCL_RS00545	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
SCL_RS00575	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
SCL_RS00575	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
SCL_RS00575	PWY-6148	tetrahydromethanopterin biosynthesis
SCL_RS00575	PWY-7742	SCL_RS00575
SCL_RS00575	PWY-7745	SCL_RS00575
SCL_RS00595	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SCL_RS00710	PWY-7039	phosphatidate metabolism, as a signaling molecule
SCL_RS00710	PWY-7817	SCL_RS00710
SCL_RS00715	PWY-6825	phosphatidylcholine biosynthesis V
SCL_RS00725	PWY-5350	thiosulfate disproportionation III (rhodanese)
SCL_RS00840	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
SCL_RS00840	PWY-6148	tetrahydromethanopterin biosynthesis
SCL_RS00840	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
SCL_RS00840	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
SCL_RS00840	PWY-7852	SCL_RS00840
SCL_RS00840	PWY-7853	SCL_RS00840
SCL_RS00845	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
SCL_RS00845	PWY-6148	tetrahydromethanopterin biosynthesis
SCL_RS00845	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
SCL_RS00845	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
SCL_RS00855	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
SCL_RS00855	PWY-5368	dimorphecolate biosynthesis
SCL_RS00855	PWY-5995	linoleate biosynthesis I (plants)
SCL_RS00855	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
SCL_RS00855	PWY-6803	phosphatidylcholine acyl editing
SCL_RS00855	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
SCL_RS00855	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
SCL_RS00855	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
SCL_RS00855	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
SCL_RS00855	PWY-7470	phosphatidylcholine biosynthesis VII
SCL_RS00855	PWY-7618	ricinoleate biosynthesis
SCL_RS00925	PWY-6891	thiazole biosynthesis II (Bacillus)
SCL_RS00925	PWY-6892	thiazole biosynthesis I (E. coli)
SCL_RS00995	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
SCL_RS00995	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
SCL_RS01000	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
SCL_RS01000	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
SCL_RS01010	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SCL_RS01010	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SCL_RS01055	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
SCL_RS01160	PWY-6823	molybdenum cofactor biosynthesis
SCL_RS01165	PWY-5964	guanylyl molybdenum cofactor biosynthesis
SCL_RS01165	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
SCL_RS01200	PWY-723	alkylnitronates degradation
SCL_RS01235	PWY-3781	aerobic respiration I (cytochrome c)
SCL_RS01235	PWY-4521	arsenite oxidation I (respiratory)
SCL_RS01235	PWY-6692	Fe(II) oxidation
SCL_RS01235	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SCL_RS01260	PWY-3781	aerobic respiration I (cytochrome c)
SCL_RS01260	PWY-4521	arsenite oxidation I (respiratory)
SCL_RS01260	PWY-6692	Fe(II) oxidation
SCL_RS01260	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SCL_RS01265	PWY-6683	sulfate reduction III (assimilatory)
SCL_RS01270	PWY-5306	superpathway of thiosulfate metabolism (<i>Desulfovibrio sulfodismutans</i>)
SCL_RS01270	PWY-5360	superpathway of tetrathionate reduction (<i>Salmonella typhimurium</i>)
SCL_RS01270	PWY-6683	sulfate reduction III (assimilatory)
SCL_RS01385	PWY-5723	Rubisco shunt
SCL_RS01465	PWY-4061	glutathione-mediated detoxification I
SCL_RS01465	PWY-6842	glutathione-mediated detoxification II
SCL_RS01465	PWY-7112	4-hydroxy-2-nonenal detoxification
SCL_RS01465	PWY-7533	gliotoxin biosynthesis
SCL_RS01525	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
SCL_RS01525	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
SCL_RS01525	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
SCL_RS01525	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
SCL_RS01525	PWY-6978	plastoquinol-9 biosynthesis II
SCL_RS01550	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
SCL_RS01560	PWY-7805	SCL_RS01560
SCL_RS01560	PWY-7807	SCL_RS01560
SCL_RS01570	PWY-1042	glycolysis IV (plant cytosol)
SCL_RS01570	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SCL_RS01570	PWY-5484	glycolysis II (from fructose 6-phosphate)
SCL_RS01570	PWY-7385	1,3-propanediol biosynthesis (engineered)
SCL_RS01580	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SCL_RS01585	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SCL_RS01585	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
SCL_RS01605	PWY-2201	folate transformations I
SCL_RS01770	PWY-5839	menaquinol-7 biosynthesis
SCL_RS01770	PWY-5844	menaquinol-9 biosynthesis
SCL_RS01770	PWY-5849	menaquinol-6 biosynthesis
SCL_RS01770	PWY-5890	menaquinol-10 biosynthesis
SCL_RS01770	PWY-5891	menaquinol-11 biosynthesis
SCL_RS01770	PWY-5892	menaquinol-12 biosynthesis
SCL_RS01770	PWY-5895	menaquinol-13 biosynthesis
SCL_RS01805	PWY-1042	glycolysis IV (plant cytosol)
SCL_RS01805	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SCL_RS01805	PWY-5484	glycolysis II (from fructose 6-phosphate)
SCL_RS01805	PWY-5723	Rubisco shunt
SCL_RS01805	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SCL_RS01805	PWY-6886	1-butanol autotrophic biosynthesis
SCL_RS01805	PWY-6901	superpathway of glucose and xylose degradation
SCL_RS01805	PWY-7003	glycerol degradation to butanol
SCL_RS01805	PWY-7124	ethylene biosynthesis V (engineered)
SCL_RS01805	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
SCL_RS01830	PWY-5667	CDP-diacylglycerol biosynthesis I
SCL_RS01830	PWY-5981	CDP-diacylglycerol biosynthesis III
SCL_RS01835	PWY-6004	glycine betaine biosynthesis V (from glycine)
SCL_RS01970	PWY-6519	8-amino-7-oxononanoate biosynthesis I
SCL_RS01970	PWY-6578	8-amino-7-oxononanoate biosynthesis III
SCL_RS01970	PWY-7147	8-amino-7-oxononanoate biosynthesis II
SCL_RS01975	PWY-6519	8-amino-7-oxononanoate biosynthesis I
SCL_RS01980	PWY-2201	folate transformations I
SCL_RS01980	PWY-6519	8-amino-7-oxononanoate biosynthesis I
SCL_RS01985	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
SCL_RS02000	PWY-3781	aerobic respiration I (cytochrome c)
SCL_RS02000	PWY-4521	arsenite oxidation I (respiratory)
SCL_RS02000	PWY-6692	Fe(II) oxidation
SCL_RS02000	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SCL_RS02095	PWY-6832	2-aminoethylphosphonate degradation II
SCL_RS02145	PWY-7205	CMP phosphorylation
SCL_RS02195	PWY-5839	menaquinol-7 biosynthesis
SCL_RS02195	PWY-5844	menaquinol-9 biosynthesis
SCL_RS02195	PWY-5849	menaquinol-6 biosynthesis
SCL_RS02195	PWY-5890	menaquinol-10 biosynthesis
SCL_RS02195	PWY-5891	menaquinol-11 biosynthesis
SCL_RS02195	PWY-5892	menaquinol-12 biosynthesis
SCL_RS02195	PWY-5895	menaquinol-13 biosynthesis
SCL_RS02320	PWY-6749	CMP-legionaminate biosynthesis I
SCL_RS02335	PWY-7851	SCL_RS02335
SCL_RS02390	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SCL_RS02390	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
SCL_RS02395	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SCL_RS02395	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SCL_RS02395	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SCL_RS02400	PWY-5269	cardiolipin biosynthesis II
SCL_RS02400	PWY-5668	cardiolipin biosynthesis I
SCL_RS02400	PWY-7817	SCL_RS02400
SCL_RS02420	PWY-4202	arsenate detoxification I (glutaredoxin)
SCL_RS02420	PWY-4621	arsenate detoxification II (glutaredoxin)
SCL_RS02435	PWY-5392	reductive TCA cycle II
SCL_RS02435	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SCL_RS02435	PWY-5690	TCA cycle II (plants and fungi)
SCL_RS02435	PWY-5913	TCA cycle VI (obligate autotrophs)
SCL_RS02435	PWY-6728	methylaspartate cycle
SCL_RS02435	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SCL_RS02435	PWY-7254	TCA cycle VII (acetate-producers)
SCL_RS02435	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SCL_RS02515	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
SCL_RS02530	PWY-2201	folate transformations I
SCL_RS02625	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SCL_RS02660	PWY-2201	folate transformations I
SCL_RS02680	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SCL_RS02680	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SCL_RS02685	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SCL_RS02685	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
SCL_RS02685	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SCL_RS02690	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SCL_RS02690	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SCL_RS02700	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SCL_RS02700	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
SCL_RS02700	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
SCL_RS02700	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SCL_RS02705	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SCL_RS02705	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SCL_RS02710	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SCL_RS02710	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SCL_RS02715	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SCL_RS02715	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SCL_RS02735	PWY-2201	folate transformations I
SCL_RS02735	PWY-5497	purine nucleobases degradation II (anaerobic)
SCL_RS02750	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SCL_RS02755	PWY-7851	SCL_RS02755
SCL_RS02810	PWY-5392	reductive TCA cycle II
SCL_RS02810	PWY-5537	pyruvate fermentation to acetate V
SCL_RS02810	PWY-5538	pyruvate fermentation to acetate VI
SCL_RS02810	PWY-5690	TCA cycle II (plants and fungi)
SCL_RS02810	PWY-5913	TCA cycle VI (obligate autotrophs)
SCL_RS02810	PWY-6728	methylaspartate cycle
SCL_RS02810	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SCL_RS02810	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SCL_RS02850	PWY-6679	jadomycin biosynthesis
SCL_RS02850	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SCL_RS02855	PWY-2161	folate polyglutamylation
SCL_RS02870	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SCL_RS02870	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SCL_RS02870	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SCL_RS02870	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SCL_RS02935	PWY-5278	sulfite oxidation III
SCL_RS02935	PWY-5279	sulfite oxidation II
SCL_RS03015	PWY-6825	phosphatidylcholine biosynthesis V
SCL_RS03060	PWY-7851	SCL_RS03060
SCL_RS03070	PWY-4041	&gamma;-glutamyl cycle
SCL_RS03070	PWY-5826	hypoglycin biosynthesis
SCL_RS03140	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SCL_RS03140	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
SCL_RS03145	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SCL_RS03145	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
SCL_RS03165	PWY-4983	L-citrulline-nitric oxide cycle
SCL_RS03165	PWY-4984	urea cycle
SCL_RS03165	PWY-5	canavanine biosynthesis
SCL_RS03165	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SCL_RS03165	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SCL_RS03240	PWY-2941	L-lysine biosynthesis II
SCL_RS03240	PWY-2942	L-lysine biosynthesis III
SCL_RS03240	PWY-5097	L-lysine biosynthesis VI
SCL_RS03255	PWY-2941	L-lysine biosynthesis II
SCL_RS03255	PWY-5097	L-lysine biosynthesis VI
SCL_RS03440	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SCL_RS03440	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SCL_RS03480	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SCL_RS03500	PWY-7560	methylerythritol phosphate pathway II
SCL_RS03520	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
SCL_RS03585	PWY-3341	L-proline biosynthesis III
SCL_RS03585	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
SCL_RS03590	PWY-5381	pyridine nucleotide cycling (plants)
SCL_RS03590	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
SCL_RS03590	PWY-7761	SCL_RS03590
SCL_RS03600	PWY-6825	phosphatidylcholine biosynthesis V
SCL_RS03665	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SCL_RS03665	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SCL_RS03665	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SCL_RS03665	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SCL_RS03665	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SCL_RS03665	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SCL_RS03665	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
SCL_RS03665	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
SCL_RS03740	PWY-6317	galactose degradation I (Leloir pathway)
SCL_RS03740	PWY-6527	stachyose degradation
SCL_RS03745	PWY-2941	L-lysine biosynthesis II
SCL_RS03745	PWY-2942	L-lysine biosynthesis III
SCL_RS03745	PWY-5097	L-lysine biosynthesis VI
SCL_RS03760	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SCL_RS03760	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SCL_RS03760	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SCL_RS03790	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SCL_RS03795	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
SCL_RS03795	PWY-6855	chitin degradation I (archaea)
SCL_RS03795	PWY-6906	chitin derivatives degradation
SCL_RS03880	PWY-5278	sulfite oxidation III
SCL_RS03880	PWY-5340	sulfate activation for sulfonation
SCL_RS03880	PWY-6683	sulfate reduction III (assimilatory)
SCL_RS03880	PWY-6932	selenate reduction
SCL_RS03890	PWY-4981	L-proline biosynthesis II (from arginine)
SCL_RS03890	PWY-4984	urea cycle
SCL_RS03890	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SCL_RS03915	PWY-6891	thiazole biosynthesis II (Bacillus)
SCL_RS03915	PWY-6892	thiazole biosynthesis I (E. coli)
SCL_RS03915	PWY-7560	methylerythritol phosphate pathway II
SCL_RS03925	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
SCL_RS03925	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
SCL_RS03930	PWY-4983	L-citrulline-nitric oxide cycle
SCL_RS03930	PWY-4984	urea cycle
SCL_RS03930	PWY-5	canavanine biosynthesis
SCL_RS03930	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SCL_RS03930	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SCL_RS03940	PWY-5386	methylglyoxal degradation I
SCL_RS03990	PWY-6825	phosphatidylcholine biosynthesis V
SCL_RS04010	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
SCL_RS04040	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
SCL_RS04055	PWY-6654	phosphopantothenate biosynthesis III
SCL_RS04055	PWY-7862	SCL_RS04055
SCL_RS04065	PWY-4041	&gamma;-glutamyl cycle
SCL_RS04065	PWY-5826	hypoglycin biosynthesis
SCL_RS04130	PWY-5642	2,4-dinitrotoluene degradation
SCL_RS04130	PWY-6373	acrylate degradation
SCL_RS04155	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SCL_RS04165	PWY-5101	L-isoleucine biosynthesis II
SCL_RS04165	PWY-5103	L-isoleucine biosynthesis III
SCL_RS04165	PWY-5104	L-isoleucine biosynthesis IV
SCL_RS04165	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
SCL_RS04165	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
SCL_RS04165	PWY-6389	(<i>S</i>)-acetoin biosynthesis
SCL_RS04165	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SCL_RS04170	PWY-5101	L-isoleucine biosynthesis II
SCL_RS04170	PWY-5103	L-isoleucine biosynthesis III
SCL_RS04170	PWY-5104	L-isoleucine biosynthesis IV
SCL_RS04170	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
SCL_RS04170	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
SCL_RS04170	PWY-6389	(<i>S</i>)-acetoin biosynthesis
SCL_RS04170	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SCL_RS04175	PWY-5103	L-isoleucine biosynthesis III
SCL_RS04175	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SCL_RS04180	PWY-5669	phosphatidylethanolamine biosynthesis I
SCL_RS04185	PWY-5669	phosphatidylethanolamine biosynthesis I
SCL_RS04190	PWY-6871	3-methylbutanol biosynthesis
SCL_RS04500	PWY-3341	L-proline biosynthesis III
SCL_RS04500	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
SCL_RS04520	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
SCL_RS04520	PWY-6167	flavin biosynthesis II (archaea)
SCL_RS04520	PWY-6168	flavin biosynthesis III (fungi)
SCL_RS04520	PWY-7863	SCL_RS04520
SCL_RS04540	PWY-7560	methylerythritol phosphate pathway II
SCL_RS04805	PWY-6825	phosphatidylcholine biosynthesis V
SCL_RS04835	PWY-5482	pyruvate fermentation to acetate II
SCL_RS04835	PWY-5485	pyruvate fermentation to acetate IV
SCL_RS04835	PWY-5497	purine nucleobases degradation II (anaerobic)
SCL_RS04880	PWY-5941	glycogen degradation II (eukaryotic)
SCL_RS04880	PWY-6731	starch degradation III
SCL_RS04880	PWY-6737	starch degradation V
SCL_RS04880	PWY-7238	sucrose biosynthesis II
SCL_RS04885	PWY-6749	CMP-legionaminate biosynthesis I
SCL_RS04950	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
SCL_RS04950	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
SCL_RS04950	PWY-6268	adenosylcobalamin salvage from cobalamin
SCL_RS04950	PWY-6269	adenosylcobalamin salvage from cobinamide II
SCL_RS05045	PWY-6700	queuosine biosynthesis
SCL_RS05155	PWY-6854	ethylene biosynthesis III (microbes)
SCL_RS05200	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
SCL_RS05230	PWY-5350	thiosulfate disproportionation III (rhodanese)
SCL_RS05260	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
SCL_RS05260	PWY-6148	tetrahydromethanopterin biosynthesis
SCL_RS05260	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
SCL_RS05260	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
SCL_RS05260	PWY-7852	SCL_RS05260
SCL_RS05260	PWY-7853	SCL_RS05260
SCL_RS05270	PWY-6654	phosphopantothenate biosynthesis III
SCL_RS05280	PWY-5155	&beta;-alanine biosynthesis III
SCL_RS05420	PWY-2722	trehalose degradation IV
SCL_RS05420	PWY-2723	trehalose degradation V
SCL_RS05420	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
SCL_RS05420	PWY-5661	GDP-glucose biosynthesis
SCL_RS05420	PWY-621	sucrose degradation III (sucrose invertase)
SCL_RS05420	PWY-7238	sucrose biosynthesis II
SCL_RS05420	PWY-7385	1,3-propanediol biosynthesis (engineered)
SCL_RS05425	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
SCL_RS05425	PWY-622	starch biosynthesis
SCL_RS05455	PWY-622	starch biosynthesis
SCL_RS05460	PWY-622	starch biosynthesis
SCL_RS05470	PWY-5941	glycogen degradation II (eukaryotic)
SCL_RS05470	PWY-6724	starch degradation II
SCL_RS05470	PWY-6737	starch degradation V
SCL_RS05470	PWY-7238	sucrose biosynthesis II
SCL_RS05480	PWY-5941	glycogen degradation II (eukaryotic)
SCL_RS05480	PWY-6731	starch degradation III
SCL_RS05480	PWY-6737	starch degradation V
SCL_RS05480	PWY-7238	sucrose biosynthesis II
SCL_RS05485	PWY-6700	queuosine biosynthesis
SCL_RS05515	PWY-6700	queuosine biosynthesis
SCL_RS05585	PWY-1622	formaldehyde assimilation I (serine pathway)
SCL_RS05585	PWY-181	photorespiration
SCL_RS05585	PWY-2161	folate polyglutamylation
SCL_RS05585	PWY-2201	folate transformations I
SCL_RS05585	PWY-3661	glycine betaine degradation I
SCL_RS05585	PWY-3661-1	glycine betaine degradation II (mammalian)
SCL_RS05585	PWY-3841	folate transformations II
SCL_RS05585	PWY-5497	purine nucleobases degradation II (anaerobic)
SCL_RS05595	PWY-5525	D-glucuronate degradation I
SCL_RS05600	PWY-6167	flavin biosynthesis II (archaea)
SCL_RS05600	PWY-6168	flavin biosynthesis III (fungi)
SCL_RS05600	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SCL_RS05615	PWY-6167	flavin biosynthesis II (archaea)
SCL_RS05615	PWY-6168	flavin biosynthesis III (fungi)
SCL_RS05615	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
SCL_RS05620	PWY-6167	flavin biosynthesis II (archaea)
SCL_RS05620	PWY-6168	flavin biosynthesis III (fungi)
SCL_RS05630	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
SCL_RS05630	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
SCL_RS05630	PWY-6896	thiamin salvage I
SCL_RS05630	PWY-6897	thiamin salvage II
SCL_RS05655	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
SCL_RS05655	PWY-5368	dimorphecolate biosynthesis
SCL_RS05655	PWY-5995	linoleate biosynthesis I (plants)
SCL_RS05655	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
SCL_RS05655	PWY-6803	phosphatidylcholine acyl editing
SCL_RS05655	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
SCL_RS05655	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
SCL_RS05655	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
SCL_RS05655	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
SCL_RS05655	PWY-7470	phosphatidylcholine biosynthesis VII
SCL_RS05655	PWY-7618	ricinoleate biosynthesis
SCL_RS05735	PWY-6683	sulfate reduction III (assimilatory)
SCL_RS05760	PWY-181	photorespiration
SCL_RS05765	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
SCL_RS05765	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
SCL_RS05765	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
SCL_RS05765	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
SCL_RS05765	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
SCL_RS05765	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
SCL_RS05765	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
SCL_RS05765	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
SCL_RS05765	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
SCL_RS05765	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
SCL_RS05790	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
SCL_RS05790	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
SCL_RS05810	PWY-3461	L-tyrosine biosynthesis II
SCL_RS05810	PWY-3462	L-phenylalanine biosynthesis II
SCL_RS05810	PWY-6120	L-tyrosine biosynthesis III
SCL_RS05810	PWY-6627	salinosporamide A biosynthesis
SCL_RS05810	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
SCL_RS05810	PWY-7626	bacilysin biosynthesis
SCL_RS05820	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
SCL_RS05825	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SCL_RS05830	PWY-7205	CMP phosphorylation
SCL_RS05855	PWY-5686	UMP biosynthesis
SCL_RS05855	PWY-7790	SCL_RS05855
SCL_RS05855	PWY-7791	SCL_RS05855
SCL_RS05890	PWY-5659	GDP-mannose biosynthesis
SCL_RS05890	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
SCL_RS05895	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
SCL_RS05895	PWY-5739	GDP-D-perosamine biosynthesis
SCL_RS05895	PWY-5740	GDP-L-colitose biosynthesis
SCL_RS05895	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
SCL_RS05895	PWY-7573	GDP-mycosamine biosynthesis
SCL_RS05900	PWY-5481	pyruvate fermentation to lactate
SCL_RS05900	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
SCL_RS05900	PWY-6901	superpathway of glucose and xylose degradation
SCL_RS05925	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
SCL_RS05925	PWY-6749	CMP-legionaminate biosynthesis I
SCL_RS05925	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
SCL_RS05925	PWY-7102	bisabolene biosynthesis
SCL_RS05925	PWY-7131	CMP-legionaminate biosynthesis II
SCL_RS05925	PWY-7721	SCL_RS05925
SCL_RS05925	PWY-7736	SCL_RS05925
SCL_RS05950	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
SCL_RS06055	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SCL_RS06055	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
SCL_RS06055	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SCL_RS06065	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
SCL_RS06065	PWY-7820	SCL_RS06065
SCL_RS06070	PWY-3801	sucrose degradation II (sucrose synthase)
SCL_RS06070	PWY-6527	stachyose degradation
SCL_RS06070	PWY-7238	sucrose biosynthesis II
SCL_RS06070	PWY-7343	UDP-glucose biosynthesis
SCL_RS06070	PWY-7817	SCL_RS06070
SCL_RS06110	PWY-7560	methylerythritol phosphate pathway II
SCL_RS06115	PWY-7560	methylerythritol phosphate pathway II
SCL_RS06130	PWY-7560	methylerythritol phosphate pathway II
SCL_RS06180	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
SCL_RS06185	PWY-1001	cellulose biosynthesis
SCL_RS06200	PWY-5194	siroheme biosynthesis
SCL_RS06200	PWY-5196	factor 430 biosynthesis
SCL_RS06200	PWY-5441	S-methyl-L-methionine cycle
SCL_RS06200	PWY-702	L-methionine biosynthesis II
SCL_RS06200	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SCL_RS06275	PWY-5306	superpathway of thiosulfate metabolism (<i>Desulfovibrio sulfodismutans</i>)
SCL_RS06275	PWY-5360	superpathway of tetrathionate reduction (<i>Salmonella typhimurium</i>)
SCL_RS06275	PWY-6683	sulfate reduction III (assimilatory)
SCL_RS06280	PWY-6683	sulfate reduction III (assimilatory)
SCL_RS06310	PWY-5350	thiosulfate disproportionation III (rhodanese)
SCL_RS06315	PWY-723	alkylnitronates degradation
SCL_RS06325	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SCL_RS06325	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SCL_RS06395	PWY-2781	<i>cis</i>-zeatin biosynthesis
SCL_RS06430	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SCL_RS06485	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SCL_RS06545	PWY-5839	menaquinol-7 biosynthesis
SCL_RS06545	PWY-5844	menaquinol-9 biosynthesis
SCL_RS06545	PWY-5849	menaquinol-6 biosynthesis
SCL_RS06545	PWY-5890	menaquinol-10 biosynthesis
SCL_RS06545	PWY-5891	menaquinol-11 biosynthesis
SCL_RS06545	PWY-5892	menaquinol-12 biosynthesis
SCL_RS06545	PWY-5895	menaquinol-13 biosynthesis
SCL_RS06620	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SCL_RS06680	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
SCL_RS06745	PWY-4381	fatty acid biosynthesis initiation I
SCL_RS06750	PWY-4381	fatty acid biosynthesis initiation I
SCL_RS06750	PWY-6799	fatty acid biosynthesis (plant mitochondria)
SCL_RS06750	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SCL_RS06755	PWY-5367	petroselinate biosynthesis
SCL_RS06755	PWY-5515	L-arabinose degradation II
SCL_RS06755	PWY-5525	D-glucuronate degradation I
SCL_RS06755	PWY-5971	palmitate biosynthesis II (bacteria and plants)
SCL_RS06755	PWY-5973	<i>cis</i>-vaccenate biosynthesis
SCL_RS06755	PWY-5989	stearate biosynthesis II (bacteria and plants)
SCL_RS06755	PWY-5994	palmitate biosynthesis I (animals and fungi)
SCL_RS06755	PWY-6113	superpathway of mycolate biosynthesis
SCL_RS06755	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
SCL_RS06755	PWY-6519	8-amino-7-oxononanoate biosynthesis I
SCL_RS06755	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SCL_RS06755	PWY-7663	gondoate biosynthesis (anaerobic)
SCL_RS06755	PWY-7664	oleate biosynthesis IV (anaerobic)
SCL_RS06755	PWY-7858	SCL_RS06755
SCL_RS06755	PWYG-321	mycolate biosynthesis
SCL_RS06770	PWY-5958	acridone alkaloid biosynthesis
SCL_RS06770	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
SCL_RS06770	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
SCL_RS06775	PWY-6543	4-aminobenzoate biosynthesis
SCL_RS06785	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SCL_RS06785	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SCL_RS06785	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
SCL_RS06785	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
SCL_RS06785	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SCL_RS06785	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SCL_RS06810	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
SCL_RS06810	PWY-622	starch biosynthesis
SCL_RS06825	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SCL_RS06825	PWY-5723	Rubisco shunt
SCL_RS06875	PWY-1042	glycolysis IV (plant cytosol)
SCL_RS06875	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SCL_RS06875	PWY-5484	glycolysis II (from fructose 6-phosphate)
SCL_RS06875	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SCL_RS06875	PWY-7385	1,3-propanediol biosynthesis (engineered)
SCL_RS06995	PWY-5839	menaquinol-7 biosynthesis
SCL_RS06995	PWY-5844	menaquinol-9 biosynthesis
SCL_RS06995	PWY-5849	menaquinol-6 biosynthesis
SCL_RS06995	PWY-5890	menaquinol-10 biosynthesis
SCL_RS06995	PWY-5891	menaquinol-11 biosynthesis
SCL_RS06995	PWY-5892	menaquinol-12 biosynthesis
SCL_RS06995	PWY-5895	menaquinol-13 biosynthesis
SCL_RS07175	PWY-5269	cardiolipin biosynthesis II
SCL_RS07175	PWY-5668	cardiolipin biosynthesis I
SCL_RS07175	PWY-7817	SCL_RS07175
SCL_RS07190	PWY-6834	spermidine biosynthesis III
SCL_RS07195	PWY-6902	chitin degradation II
SCL_RS07195	PWY-7822	SCL_RS07195
SCL_RS07215	PWY-6936	seleno-amino acid biosynthesis
SCL_RS07220	PWY-7805	SCL_RS07220
SCL_RS07220	PWY-7807	SCL_RS07220
SCL_RS07350	PWY-5381	pyridine nucleotide cycling (plants)
SCL_RS07350	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
SCL_RS07350	PWY-6596	adenosine nucleotides degradation I
SCL_RS07350	PWY-6606	guanosine nucleotides degradation II
SCL_RS07350	PWY-6607	guanosine nucleotides degradation I
SCL_RS07350	PWY-6608	guanosine nucleotides degradation III
SCL_RS07350	PWY-7185	UTP and CTP dephosphorylation I
SCL_RS07350	PWY-7821	SCL_RS07350
SCL_RS07450	PWY-1001	cellulose biosynthesis
SCL_RS07450	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SCL_RS07450	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
SCL_RS07450	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
SCL_RS07450	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SCL_RS07475	PWY-6012	acyl carrier protein metabolism I
SCL_RS07475	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
SCL_RS07535	PWY-5316	nicotine biosynthesis
SCL_RS07535	PWY-7342	superpathway of nicotine biosynthesis
SCL_RS07550	PWY-3781	aerobic respiration I (cytochrome c)
SCL_RS07550	PWY-4302	aerobic respiration III (alternative oxidase pathway)
SCL_RS07550	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SCL_RS07550	PWY-5690	TCA cycle II (plants and fungi)
SCL_RS07550	PWY-6728	methylaspartate cycle
SCL_RS07550	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SCL_RS07550	PWY-7254	TCA cycle VII (acetate-producers)
SCL_RS07550	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SCL_RS07565	PWY-3781	aerobic respiration I (cytochrome c)
SCL_RS07565	PWY-4302	aerobic respiration III (alternative oxidase pathway)
SCL_RS07565	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SCL_RS07565	PWY-5690	TCA cycle II (plants and fungi)
SCL_RS07565	PWY-6728	methylaspartate cycle
SCL_RS07565	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SCL_RS07565	PWY-7254	TCA cycle VII (acetate-producers)
SCL_RS07565	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SCL_RS07605	PWY-1042	glycolysis IV (plant cytosol)
SCL_RS07605	PWY-1622	formaldehyde assimilation I (serine pathway)
SCL_RS07605	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SCL_RS07605	PWY-5484	glycolysis II (from fructose 6-phosphate)
SCL_RS07605	PWY-5723	Rubisco shunt
SCL_RS07605	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SCL_RS07605	PWY-6886	1-butanol autotrophic biosynthesis
SCL_RS07605	PWY-6901	superpathway of glucose and xylose degradation
SCL_RS07605	PWY-7003	glycerol degradation to butanol
SCL_RS07605	PWY-7124	ethylene biosynthesis V (engineered)
SCL_RS07605	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
SCL_RS07610	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
SCL_RS07610	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
SCL_RS07615	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
SCL_RS07615	PWY-7177	UTP and CTP dephosphorylation II
SCL_RS07615	PWY-7185	UTP and CTP dephosphorylation I
SCL_RS07625	PWY-6679	jadomycin biosynthesis
SCL_RS07625	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SCL_RS07850	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SCL_RS07850	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
SCL_RS07850	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SCL_RS07865	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SCL_RS07865	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
SCL_RS07865	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
SCL_RS07865	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SCL_RS07940	PWY-5278	sulfite oxidation III
SCL_RS07940	PWY-5340	sulfate activation for sulfonation
SCL_RS07940	PWY-6683	sulfate reduction III (assimilatory)
SCL_RS07940	PWY-6932	selenate reduction
SCL_RS07955	PWY-3221	dTDP-L-rhamnose biosynthesis II
SCL_RS07955	PWY-6808	dTDP-D-forosamine biosynthesis
SCL_RS07955	PWY-6942	dTDP-D-desosamine biosynthesis
SCL_RS07955	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
SCL_RS07955	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
SCL_RS07955	PWY-6974	dTDP-L-olivose biosynthesis
SCL_RS07955	PWY-6976	dTDP-L-mycarose biosynthesis
SCL_RS07955	PWY-7104	dTDP-L-megosamine biosynthesis
SCL_RS07955	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
SCL_RS07955	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
SCL_RS07955	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
SCL_RS07955	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
SCL_RS07955	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
SCL_RS07955	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
SCL_RS07955	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
SCL_RS07955	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
SCL_RS07955	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
SCL_RS07955	PWY-7688	SCL_RS07955
SCL_RS07955	PWY-7814	SCL_RS07955
SCL_RS07960	PWY-3221	dTDP-L-rhamnose biosynthesis II
SCL_RS07960	PWY-6808	dTDP-D-forosamine biosynthesis
SCL_RS07960	PWY-6942	dTDP-D-desosamine biosynthesis
SCL_RS07960	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
SCL_RS07960	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
SCL_RS07960	PWY-6974	dTDP-L-olivose biosynthesis
SCL_RS07960	PWY-6976	dTDP-L-mycarose biosynthesis
SCL_RS07960	PWY-7104	dTDP-L-megosamine biosynthesis
SCL_RS07960	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
SCL_RS07960	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
SCL_RS07960	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
SCL_RS07960	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
SCL_RS07960	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
SCL_RS07960	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
SCL_RS07960	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
SCL_RS07960	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
SCL_RS07960	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
SCL_RS07960	PWY-7688	SCL_RS07960
SCL_RS07960	PWY-7814	SCL_RS07960
SCL_RS07995	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
SCL_RS07995	PWY-622	starch biosynthesis
SCL_RS08005	PWY-5971	palmitate biosynthesis II (bacteria and plants)
SCL_RS08005	PWY-5973	<i>cis</i>-vaccenate biosynthesis
SCL_RS08005	PWY-5989	stearate biosynthesis II (bacteria and plants)
SCL_RS08005	PWY-5994	palmitate biosynthesis I (animals and fungi)
SCL_RS08005	PWY-6113	superpathway of mycolate biosynthesis
SCL_RS08005	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
SCL_RS08005	PWY-6519	8-amino-7-oxononanoate biosynthesis I
SCL_RS08005	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SCL_RS08005	PWY-7663	gondoate biosynthesis (anaerobic)
SCL_RS08005	PWY-7664	oleate biosynthesis IV (anaerobic)
SCL_RS08005	PWY-7858	SCL_RS08005
SCL_RS08005	PWYG-321	mycolate biosynthesis
SCL_RS08030	PWY-7294	xylose degradation IV
SCL_RS08030	PWY-7295	L-arabinose degradation IV
SCL_RS08030	PWY-7560	methylerythritol phosphate pathway II
SCL_RS08035	PWY-5667	CDP-diacylglycerol biosynthesis I
SCL_RS08035	PWY-5981	CDP-diacylglycerol biosynthesis III
SCL_RS08035	PWY-7817	SCL_RS08035
SCL_RS08065	PWY-7799	SCL_RS08065
SCL_RS08065	PWY-7800	SCL_RS08065
SCL_RS08110	PWY-6938	NADH repair
SCL_RS08115	PWY-6700	queuosine biosynthesis
SCL_RS08140	PWY-7158	L-phenylalanine degradation V
SCL_RS08200	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
SCL_RS08205	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
SCL_RS08205	PWY-6596	adenosine nucleotides degradation I
SCL_RS08205	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
SCL_RS08265	PWY-2201	folate transformations I
SCL_RS08300	PWY-6823	molybdenum cofactor biosynthesis
SCL_RS08300	PWY-6891	thiazole biosynthesis II (Bacillus)
SCL_RS08300	PWY-6892	thiazole biosynthesis I (E. coli)
SCL_RS08300	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
SCL_RS08305	PWY-6823	molybdenum cofactor biosynthesis
SCL_RS08305	PWY-6891	thiazole biosynthesis II (Bacillus)
SCL_RS08305	PWY-6892	thiazole biosynthesis I (E. coli)
SCL_RS08305	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
SCL_RS08315	PWY-6936	seleno-amino acid biosynthesis
SCL_RS08315	PWY-7274	D-cycloserine biosynthesis
SCL_RS08320	PWY-6004	glycine betaine biosynthesis V (from glycine)
SCL_RS08325	PWY-2301	<i>myo</i>-inositol biosynthesis
SCL_RS08325	PWY-4702	phytate degradation I
SCL_RS08325	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
SCL_RS08365	PWY-5484	glycolysis II (from fructose 6-phosphate)
SCL_RS08475	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
SCL_RS08560	PWY-2941	L-lysine biosynthesis II
SCL_RS08560	PWY-2942	L-lysine biosynthesis III
SCL_RS08560	PWY-5097	L-lysine biosynthesis VI
SCL_RS08560	PWY-6559	spermidine biosynthesis II
SCL_RS08560	PWY-6562	norspermidine biosynthesis
SCL_RS08560	PWY-7153	grixazone biosynthesis
SCL_RS08595	PWY-5269	cardiolipin biosynthesis II
SCL_RS08595	PWY-5668	cardiolipin biosynthesis I
SCL_RS08595	PWY-7817	SCL_RS08595
SCL_RS08665	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SCL_RS08730	PWY-6854	ethylene biosynthesis III (microbes)
SCL_RS08755	PWY-5482	pyruvate fermentation to acetate II
SCL_RS08755	PWY-5485	pyruvate fermentation to acetate IV
SCL_RS08755	PWY-5497	purine nucleobases degradation II (anaerobic)
SCL_RS08805	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
SCL_RS08805	PWY-622	starch biosynthesis
SCL_RS08810	PWY-6788	cellulose degradation II (fungi)
SCL_RS08910	PWY-6012	acyl carrier protein metabolism I
SCL_RS08910	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
SCL_RS09165	PWY-5386	methylglyoxal degradation I
SCL_RS09195	PWY-5971	palmitate biosynthesis II (bacteria and plants)
SCL_RS09195	PWY-5973	<i>cis</i>-vaccenate biosynthesis
SCL_RS09195	PWY-5989	stearate biosynthesis II (bacteria and plants)
SCL_RS09195	PWY-6113	superpathway of mycolate biosynthesis
SCL_RS09195	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
SCL_RS09195	PWY-6519	8-amino-7-oxononanoate biosynthesis I
SCL_RS09195	PWY-7663	gondoate biosynthesis (anaerobic)
SCL_RS09195	PWY-7664	oleate biosynthesis IV (anaerobic)
SCL_RS09195	PWY-7858	SCL_RS09195
SCL_RS09195	PWYG-321	mycolate biosynthesis
SCL_RS09265	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
SCL_RS09265	PWY-2201	folate transformations I
SCL_RS09265	PWY-3841	folate transformations II
SCL_RS09265	PWY-5030	L-histidine degradation III
SCL_RS09265	PWY-5497	purine nucleobases degradation II (anaerobic)
SCL_RS09265	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
SCL_RS09270	PWY-3801	sucrose degradation II (sucrose synthase)
SCL_RS09270	PWY-5054	sorbitol biosynthesis I
SCL_RS09270	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
SCL_RS09270	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
SCL_RS09270	PWY-5659	GDP-mannose biosynthesis
SCL_RS09270	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SCL_RS09270	PWY-621	sucrose degradation III (sucrose invertase)
SCL_RS09270	PWY-622	starch biosynthesis
SCL_RS09270	PWY-6981	chitin biosynthesis
SCL_RS09270	PWY-6992	1,5-anhydrofructose degradation
SCL_RS09270	PWY-7238	sucrose biosynthesis II
SCL_RS09270	PWY-7347	sucrose biosynthesis III
SCL_RS09270	PWY-7385	1,3-propanediol biosynthesis (engineered)
SCL_RS09285	PWY-3841	folate transformations II
SCL_RS09285	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SCL_RS09285	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
SCL_RS09285	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SCL_RS09285	PWY-7199	pyrimidine deoxyribonucleosides salvage
SCL_RS09285	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SCL_RS09290	PWY-3841	folate transformations II
SCL_RS09290	PWY-6614	tetrahydrofolate biosynthesis
SCL_RS09305	PWY-2941	L-lysine biosynthesis II
SCL_RS09305	PWY-2942	L-lysine biosynthesis III
SCL_RS09305	PWY-5097	L-lysine biosynthesis VI
SCL_RS09305	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SCL_RS09305	PWY-6559	spermidine biosynthesis II
SCL_RS09305	PWY-6562	norspermidine biosynthesis
SCL_RS09305	PWY-7153	grixazone biosynthesis
SCL_RS09305	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SCL_RS09310	PWY-7396	butanol and isobutanol biosynthesis (engineered)
SCL_RS09345	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SCL_RS09370	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SCL_RS09370	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SCL_RS09380	PWY-2201	folate transformations I
SCL_RS09380	PWY-3841	folate transformations II
SCL_RS09530	PWY-5316	nicotine biosynthesis
SCL_RS09530	PWY-5381	pyridine nucleotide cycling (plants)
SCL_RS09530	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
SCL_RS09530	PWY-7342	superpathway of nicotine biosynthesis
SCL_RS09600	PWY-5381	pyridine nucleotide cycling (plants)
SCL_RS09600	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
SCL_RS09600	PWY-7761	SCL_RS09600
SCL_RS09605	PWY-5392	reductive TCA cycle II
SCL_RS09605	PWY-5537	pyruvate fermentation to acetate V
SCL_RS09605	PWY-5538	pyruvate fermentation to acetate VI
SCL_RS09605	PWY-5690	TCA cycle II (plants and fungi)
SCL_RS09605	PWY-5913	TCA cycle VI (obligate autotrophs)
SCL_RS09605	PWY-6728	methylaspartate cycle
SCL_RS09605	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SCL_RS09605	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SCL_RS09610	PWY-5392	reductive TCA cycle II
SCL_RS09610	PWY-5537	pyruvate fermentation to acetate V
SCL_RS09610	PWY-5538	pyruvate fermentation to acetate VI
SCL_RS09610	PWY-5690	TCA cycle II (plants and fungi)
SCL_RS09610	PWY-5913	TCA cycle VI (obligate autotrophs)
SCL_RS09610	PWY-6728	methylaspartate cycle
SCL_RS09610	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SCL_RS09610	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SCL_RS09655	PWY-7801	SCL_RS09655
SCL_RS09660	PWY-7799	SCL_RS09660
SCL_RS09690	PWY-5913	TCA cycle VI (obligate autotrophs)
SCL_RS09690	PWY-6549	L-glutamine biosynthesis III
SCL_RS09690	PWY-6728	methylaspartate cycle
SCL_RS09690	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SCL_RS09690	PWY-7124	ethylene biosynthesis V (engineered)
SCL_RS09690	PWY-7254	TCA cycle VII (acetate-producers)
SCL_RS09690	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SCL_RS09710	PWY-6123	inosine-5'-phosphate biosynthesis I
SCL_RS09710	PWY-6124	inosine-5'-phosphate biosynthesis II
SCL_RS09710	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SCL_RS09710	PWY-7234	inosine-5'-phosphate biosynthesis III
SCL_RS09745	PWY-5839	menaquinol-7 biosynthesis
SCL_RS09745	PWY-5844	menaquinol-9 biosynthesis
SCL_RS09745	PWY-5849	menaquinol-6 biosynthesis
SCL_RS09745	PWY-5890	menaquinol-10 biosynthesis
SCL_RS09745	PWY-5891	menaquinol-11 biosynthesis
SCL_RS09745	PWY-5892	menaquinol-12 biosynthesis
SCL_RS09745	PWY-5895	menaquinol-13 biosynthesis
SCL_RS09800	PWY-5101	L-isoleucine biosynthesis II
SCL_RS09800	PWY-5103	L-isoleucine biosynthesis III
SCL_RS09800	PWY-5104	L-isoleucine biosynthesis IV
SCL_RS09800	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SCL_RS09825	PWY-5686	UMP biosynthesis
SCL_RS09890	PWY-43	putrescine biosynthesis II
SCL_RS09905	PWY-6825	phosphatidylcholine biosynthesis V
SCL_RS09925	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
SCL_RS09925	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
SCL_RS09940	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SCL_RS09940	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SCL_RS09950	PWY-5667	CDP-diacylglycerol biosynthesis I
SCL_RS09950	PWY-5981	CDP-diacylglycerol biosynthesis III
SCL_RS09980	PWY-6829	tRNA methylation (yeast)
SCL_RS09980	PWY-7285	methylwyosine biosynthesis
SCL_RS09980	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
SCL_RS09995	PWY-6728	methylaspartate cycle
SCL_RS09995	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SCL_RS09995	PWY-7118	chitin degradation to ethanol
SCL_RS09995	PWY-7294	xylose degradation IV
SCL_RS09995	PWY-7295	L-arabinose degradation IV
SCL_RS09995	PWY-7854	SCL_RS09995
SCL_RS10065	PWY-5692	allantoin degradation to glyoxylate II
SCL_RS10065	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
SCL_RS10090	PWY-3781	aerobic respiration I (cytochrome c)
SCL_RS10090	PWY-4302	aerobic respiration III (alternative oxidase pathway)
SCL_RS10090	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
SCL_RS10090	PWY-6692	Fe(II) oxidation
SCL_RS10165	PWY-1042	glycolysis IV (plant cytosol)
SCL_RS10165	PWY-5484	glycolysis II (from fructose 6-phosphate)
SCL_RS10165	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SCL_RS10165	PWY-7003	glycerol degradation to butanol
SCL_RS10170	PWY-6749	CMP-legionaminate biosynthesis I
SCL_RS10175	PWY-6614	tetrahydrofolate biosynthesis
SCL_RS10200	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SCL_RS10200	PWY-5686	UMP biosynthesis
SCL_RS10200	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SCL_RS10200	PWY-7790	SCL_RS10200
SCL_RS10200	PWY-7791	SCL_RS10200
SCL_RS10205	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SCL_RS10205	PWY-5686	UMP biosynthesis
SCL_RS10205	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SCL_RS10205	PWY-7790	SCL_RS10205
SCL_RS10205	PWY-7791	SCL_RS10205
SCL_RS10240	PWY-2941	L-lysine biosynthesis II
SCL_RS10240	PWY-2942	L-lysine biosynthesis III
SCL_RS10240	PWY-5097	L-lysine biosynthesis VI
SCL_RS10290	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
SCL_RS10290	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SCL_RS10290	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
SCL_RS10415	PWY-6891	thiazole biosynthesis II (Bacillus)
SCL_RS10415	PWY-6892	thiazole biosynthesis I (E. coli)
SCL_RS10415	PWY-7560	methylerythritol phosphate pathway II
SCL_RS10420	PWY-5663	tetrahydrobiopterin biosynthesis I
SCL_RS10420	PWY-5664	tetrahydrobiopterin biosynthesis II
SCL_RS10420	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
SCL_RS10420	PWY-6703	preQ<sub>0</sub> biosynthesis
SCL_RS10420	PWY-6983	tetrahydrobiopterin biosynthesis III
SCL_RS10420	PWY-7442	drosopterin and aurodrosopterin biosynthesis
SCL_RS10420	PWY-7852	SCL_RS10420
SCL_RS10495	PWY-5350	thiosulfate disproportionation III (rhodanese)
SCL_RS10680	PWY-3781	aerobic respiration I (cytochrome c)
SCL_RS10680	PWY-6692	Fe(II) oxidation
SCL_RS10680	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
SCL_RS10680	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SCL_RS10755	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SCL_RS10755	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SCL_RS10805	PWY-5132	humulone biosynthesis
SCL_RS10805	PWY-5133	cohumulone biosynthesis
SCL_RS10805	PWY-6672	<i>cis</i>-genanyl-CoA degradation
SCL_RS10805	PWY-7118	chitin degradation to ethanol
SCL_RS10805	PWY-7857	SCL_RS10805
SCL_RS10870	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
SCL_RS10870	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
SCL_RS10990	PWY-5723	Rubisco shunt
SCL_RS11045	PWY-6703	preQ<sub>0</sub> biosynthesis
SCL_RS11050	PWY-6703	preQ<sub>0</sub> biosynthesis
SCL_RS11115	PWY-5316	nicotine biosynthesis
SCL_RS11115	PWY-7342	superpathway of nicotine biosynthesis
SCL_RS11120	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
SCL_RS11430	PWY-3961	phosphopantothenate biosynthesis II
SCL_RS11455	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
SCL_RS11565	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SCL_RS11565	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SCL_RS11630	PWY-5958	acridone alkaloid biosynthesis
SCL_RS11630	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
SCL_RS11630	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
SCL_RS11635	PWY-5958	acridone alkaloid biosynthesis
SCL_RS11635	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
SCL_RS11635	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
SCL_RS11640	PWY-181	photorespiration
SCL_RS11645	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SCL_RS11645	PWY-5723	Rubisco shunt
SCL_RS11710	PWY-6123	inosine-5'-phosphate biosynthesis I
SCL_RS11710	PWY-6124	inosine-5'-phosphate biosynthesis II
SCL_RS11710	PWY-7234	inosine-5'-phosphate biosynthesis III
SCL_RS11720	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
SCL_RS11720	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
SCL_RS11720	PWY-6897	thiamin salvage II
SCL_RS11720	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
SCL_RS11720	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
SCL_RS11720	PWY-7356	thiamin salvage IV (yeast)
SCL_RS11720	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
SCL_RS11725	PWY-5686	UMP biosynthesis
SCL_RS11725	PWY-7790	SCL_RS11725
SCL_RS11725	PWY-7791	SCL_RS11725
SCL_RS11735	PWY-6123	inosine-5'-phosphate biosynthesis I
SCL_RS11735	PWY-7234	inosine-5'-phosphate biosynthesis III
SCL_RS11740	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
SCL_RS11740	PWY-5743	3-hydroxypropanoate cycle
SCL_RS11740	PWY-5744	glyoxylate assimilation
SCL_RS11740	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SCL_RS11740	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SCL_RS11740	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SCL_RS11740	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
SCL_RS11860	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
SCL_RS11870	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
SCL_RS11870	PWY-5743	3-hydroxypropanoate cycle
SCL_RS11870	PWY-5744	glyoxylate assimilation
SCL_RS11870	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SCL_RS11870	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SCL_RS11870	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SCL_RS11870	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
SCL_RS11905	PWY-5532	adenosine nucleotides degradation IV
SCL_RS11905	PWY-5723	Rubisco shunt
SCL_RS11910	PWY-5532	adenosine nucleotides degradation IV
SCL_RS11910	PWY-5723	Rubisco shunt
SCL_RS11945	PWY-5532	adenosine nucleotides degradation IV
SCL_RS11945	PWY-5723	Rubisco shunt
SCL_RS11950	PWY-5532	adenosine nucleotides degradation IV
SCL_RS11950	PWY-5723	Rubisco shunt
SCL_RS11970	PWY-1042	glycolysis IV (plant cytosol)
SCL_RS11970	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SCL_RS11970	PWY-5484	glycolysis II (from fructose 6-phosphate)
SCL_RS11970	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SCL_RS11970	PWY-7385	1,3-propanediol biosynthesis (engineered)
SCL_RS11975	PWY-1042	glycolysis IV (plant cytosol)
SCL_RS11975	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SCL_RS11975	PWY-5484	glycolysis II (from fructose 6-phosphate)
SCL_RS11975	PWY-5723	Rubisco shunt
SCL_RS11975	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SCL_RS11975	PWY-6886	1-butanol autotrophic biosynthesis
SCL_RS11975	PWY-6901	superpathway of glucose and xylose degradation
SCL_RS11975	PWY-7003	glycerol degradation to butanol
SCL_RS11975	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
SCL_RS11975	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SCL_RS11980	PWY-1042	glycolysis IV (plant cytosol)
SCL_RS11980	PWY-5484	glycolysis II (from fructose 6-phosphate)
SCL_RS11980	PWY-6886	1-butanol autotrophic biosynthesis
SCL_RS11980	PWY-6901	superpathway of glucose and xylose degradation
SCL_RS11980	PWY-7003	glycerol degradation to butanol
SCL_RS11985	PWY-1042	glycolysis IV (plant cytosol)
SCL_RS11985	PWY-5484	glycolysis II (from fructose 6-phosphate)
SCL_RS11985	PWY-6901	superpathway of glucose and xylose degradation
SCL_RS11985	PWY-7003	glycerol degradation to butanol
SCL_RS11990	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SCL_RS11990	PWY-5723	Rubisco shunt
SCL_RS11990	PWY-6891	thiazole biosynthesis II (Bacillus)
SCL_RS11990	PWY-6892	thiazole biosynthesis I (E. coli)
SCL_RS11990	PWY-6901	superpathway of glucose and xylose degradation
SCL_RS11990	PWY-7560	methylerythritol phosphate pathway II
SCL_RS12080	PWY-5686	UMP biosynthesis
SCL_RS12080	PWY-7790	SCL_RS12080
SCL_RS12080	PWY-7791	SCL_RS12080
SCL_RS12085	PWY-5686	UMP biosynthesis
SCL_RS12085	PWY-7790	SCL_RS12085
SCL_RS12085	PWY-7791	SCL_RS12085
SCL_RS12100	PWY-3341	L-proline biosynthesis III
SCL_RS12100	PWY-4981	L-proline biosynthesis II (from arginine)
SCL_RS12100	PWY-6344	L-ornithine degradation II (Stickland reaction)
SCL_RS12150	PWY-5686	UMP biosynthesis
SCL_RS12150	PWY-7790	SCL_RS12150
SCL_RS12150	PWY-7791	SCL_RS12150
SCL_RS12175	PWY-6823	molybdenum cofactor biosynthesis
SCL_RS12185	PWY-5278	sulfite oxidation III
SCL_RS12185	PWY-5340	sulfate activation for sulfonation
SCL_RS12185	PWY-6683	sulfate reduction III (assimilatory)
SCL_RS12185	PWY-6932	selenate reduction
SCL_RS12195	PWY-5278	sulfite oxidation III
SCL_RS12195	PWY-5279	sulfite oxidation II
SCL_RS12265	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
SCL_RS12265	PWY-6164	3-dehydroquinate biosynthesis I
SCL_RS12265	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
SCL_RS12385	PWY-3781	aerobic respiration I (cytochrome c)
SCL_RS12385	PWY-4521	arsenite oxidation I (respiratory)
SCL_RS12385	PWY-6692	Fe(II) oxidation
SCL_RS12385	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SCL_RS12475	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SCL_RS12475	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SCL_RS12475	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SCL_RS12475	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SCL_RS12475	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SCL_RS12475	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SCL_RS12475	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
SCL_RS12475	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
SCL_RS12505	PWY-7294	xylose degradation IV
SCL_RS12505	PWY-7295	L-arabinose degradation IV
SCL_RS12565	PWY-381	nitrate reduction II (assimilatory)
SCL_RS12565	PWY-5675	nitrate reduction V (assimilatory)
SCL_RS12565	PWY-6549	L-glutamine biosynthesis III
SCL_RS12565	PWY-6963	ammonia assimilation cycle I
SCL_RS12565	PWY-6964	ammonia assimilation cycle II
SCL_RS12635	PWY-7799	SCL_RS12635
SCL_RS12635	PWY-7800	SCL_RS12635
SCL_RS12695	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SCL_RS12695	PWY-5723	Rubisco shunt
SCL_RS12740	PWY-4261	glycerol degradation I
SCL_RS12740	PWY-6118	glycerol-3-phosphate shuttle
SCL_RS12740	PWY-6952	glycerophosphodiester degradation
SCL_RS12770	PWY-4261	glycerol degradation I
SCL_RS13000	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SCL_RS13000	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SCL_RS13040	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
SCL_RS13150	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SCL_RS13150	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SCL_RS13210	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
SCL_RS13230	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
SCL_RS13285	PWY-5839	menaquinol-7 biosynthesis
SCL_RS13285	PWY-5844	menaquinol-9 biosynthesis
SCL_RS13285	PWY-5849	menaquinol-6 biosynthesis
SCL_RS13285	PWY-5890	menaquinol-10 biosynthesis
SCL_RS13285	PWY-5891	menaquinol-11 biosynthesis
SCL_RS13285	PWY-5892	menaquinol-12 biosynthesis
SCL_RS13285	PWY-5895	menaquinol-13 biosynthesis
SCL_RS13295	PWY-5057	L-valine degradation II
SCL_RS13295	PWY-5076	L-leucine degradation III
SCL_RS13295	PWY-5078	L-isoleucine degradation II
SCL_RS13295	PWY-5101	L-isoleucine biosynthesis II
SCL_RS13295	PWY-5103	L-isoleucine biosynthesis III
SCL_RS13295	PWY-5104	L-isoleucine biosynthesis IV
SCL_RS13295	PWY-5108	L-isoleucine biosynthesis V
SCL_RS13295	PWY-7767	SCL_RS13295
SCL_RS13305	PWY-5350	thiosulfate disproportionation III (rhodanese)
SCL_RS13375	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SCL_RS13375	PWY-6416	quinate degradation II
SCL_RS13375	PWY-6707	gallate biosynthesis
SCL_RS13410	PWY-6123	inosine-5'-phosphate biosynthesis I
SCL_RS13410	PWY-6124	inosine-5'-phosphate biosynthesis II
SCL_RS13410	PWY-7234	inosine-5'-phosphate biosynthesis III
SCL_RS13420	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SCL_RS13420	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SCL_RS13420	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SCL_RS13430	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
SCL_RS13460	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
SCL_RS13460	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SCL_RS13460	PWY-6416	quinate degradation II
SCL_RS13460	PWY-6707	gallate biosynthesis
SCL_RS13490	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SCL_RS13495	PWY-5941	glycogen degradation II (eukaryotic)
SCL_RS13535	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
SCL_RS13535	PWY-5389	3-methylthiopropanoate biosynthesis
SCL_RS13550	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SCL_RS13575	PWY-1622	formaldehyde assimilation I (serine pathway)
SCL_RS13575	PWY-5392	reductive TCA cycle II
SCL_RS13575	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SCL_RS13575	PWY-5690	TCA cycle II (plants and fungi)
SCL_RS13575	PWY-5913	TCA cycle VI (obligate autotrophs)
SCL_RS13575	PWY-6728	methylaspartate cycle
SCL_RS13575	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SCL_RS13575	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SCL_RS13575	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SCL_RS13595	PWY-1361	benzoyl-CoA degradation I (aerobic)
SCL_RS13595	PWY-5109	2-methylbutanoate biosynthesis
SCL_RS13595	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
SCL_RS13595	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
SCL_RS13595	PWY-5177	glutaryl-CoA degradation
SCL_RS13595	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SCL_RS13595	PWY-6435	4-hydroxybenzoate biosynthesis V
SCL_RS13595	PWY-6583	pyruvate fermentation to butanol I
SCL_RS13595	PWY-6863	pyruvate fermentation to hexanol
SCL_RS13595	PWY-6883	pyruvate fermentation to butanol II
SCL_RS13595	PWY-6944	androstenedione degradation
SCL_RS13595	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
SCL_RS13595	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
SCL_RS13595	PWY-7007	methyl ketone biosynthesis
SCL_RS13595	PWY-7046	4-coumarate degradation (anaerobic)
SCL_RS13595	PWY-7094	fatty acid salvage
SCL_RS13595	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
SCL_RS13595	PWY-735	jasmonic acid biosynthesis
SCL_RS13595	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
SCL_RS13595	PWY-7606	docosahexaenoate biosynthesis III (mammals)
SCL_RS13595	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
SCL_RS13595	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
SCL_RS13595	PWY-7726	SCL_RS13595
SCL_RS13595	PWY-7778	SCL_RS13595
SCL_RS13595	PWY-7779	SCL_RS13595
SCL_RS13595	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
SCL_RS13635	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
SCL_RS13635	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
SCL_RS13650	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
SCL_RS13650	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
SCL_RS13650	PWY-6897	thiamin salvage II
SCL_RS13650	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
SCL_RS13650	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
SCL_RS13650	PWY-7356	thiamin salvage IV (yeast)
SCL_RS13650	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
SCL_RS13655	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SCL_RS13735	PWY-6749	CMP-legionaminate biosynthesis I
SCL_RS13740	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
SCL_RS13740	PWY-5667	CDP-diacylglycerol biosynthesis I
SCL_RS13740	PWY-6453	stigma estolide biosynthesis
SCL_RS13740	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
SCL_RS13740	PWY-7587	oleate biosynthesis III (cyanobacteria)
SCL_RS13755	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SCL_RS13765	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
