SCL_RS00005	SM00382	ATPases associated with a variety of cellular activities
SCL_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
SCL_RS00010	SM00480	DNA polymerase III beta subunit
SCL_RS00015	SM00387	Histidine kinase-like ATPases
SCL_RS00015	SM00433	TopoisomeraseII
SCL_RS00050	SM00996	S-adenosyl-L-homocysteine hydrolase
SCL_RS00050	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
SCL_RS00060	SM00450	Rhodanese Homology Domain
SCL_RS00070	SM01126	SCL_RS00070
SCL_RS00110	SM00028	Tetratricopeptide repeats
SCL_RS00115	SM00448	cheY-homologous receiver domain
SCL_RS00120	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SCL_RS00120	SM00387	Histidine kinase-like ATPases
SCL_RS00120	SM00388	His Kinase A (phosphoacceptor) domain
SCL_RS00145	SM00257	Lysin motif
SCL_RS00160	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SCL_RS00160	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SCL_RS00160	SM00493	SCL_RS00160
SCL_RS00170	SM00925	MltA specific insert domain
SCL_RS00180	SM00341	Helicase and RNase D C-terminal
SCL_RS00180	SM00474	3'-5' exonuclease
SCL_RS00205	SM00861	Transketolase, pyrimidine binding domain
SCL_RS00230	SM00382	ATPases associated with a variety of cellular activities
SCL_RS00245	SM00938	Nitrogen regulatory protein P-II
SCL_RS00255	SM00704	CDGSH-type zinc finger. Function unknown.
SCL_RS00275	SM00836	DALR anticodon binding domain
SCL_RS00275	SM01016	Arginyl tRNA synthetase N terminal dom
SCL_RS00290	SM00842	Cell division protein FtsA
SCL_RS00310	SM00965	Secretin and TonB N terminus short domain
SCL_RS00325	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SCL_RS00350	SM00267	diguanylate cyclase
SCL_RS00355	SM00267	diguanylate cyclase
SCL_RS00365	SM01007	Class II Aldolase and Adducin N-terminal domain
SCL_RS00395	SM00849	Metallo-beta-lactamase superfamily
SCL_RS00395	SM01027	Beta-Casp domain
SCL_RS00405	SM00052	Putative diguanylate phosphodiesterase
SCL_RS00405	SM00267	diguanylate cyclase
SCL_RS00405	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SCL_RS00420	SM00487	DEAD-like helicases superfamily
SCL_RS00420	SM00490	helicase superfamily c-terminal domain
SCL_RS00445	SM00347	helix_turn_helix multiple antibiotic resistance protein
SCL_RS00505	SM00729	Elongator protein 3, MiaB family, Radical SAM
SCL_RS00530	SM00331	Sigma factor PP2C-like phosphatases
SCL_RS00530	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SCL_RS00535	SM00220	Serine/Threonine protein kinases, catalytic domain
SCL_RS00545	SM00072	Guanylate kinase homologues.
SCL_RS00550	SM01409	SCL_RS00550
SCL_RS00555	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SCL_RS00555	SM00954	Region found in RelA / SpoT proteins
SCL_RS00565	SM00487	DEAD-like helicases superfamily
SCL_RS00565	SM00490	helicase superfamily c-terminal domain
SCL_RS00610	SM00530	Helix-turn-helix XRE-family like proteins 
SCL_RS00725	SM00450	Rhodanese Homology Domain
SCL_RS00790	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SCL_RS00790	SM00267	diguanylate cyclase
SCL_RS00810	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SCL_RS00820	SM00729	Elongator protein 3, MiaB family, Radical SAM
SCL_RS00845	SM00905	Dihydroneopterin aldolase
SCL_RS00850	SM01207	SCL_RS00850
SCL_RS00870	SM00400	zinc finger
SCL_RS00870	SM00493	SCL_RS00870
SCL_RS00870	SM00766	DNA primase DnaG DnaB-binding
SCL_RS00900	SM00478	endonuclease III
SCL_RS00950	SM00849	Metallo-beta-lactamase superfamily
SCL_RS00975	SM00729	Elongator protein 3, MiaB family, Radical SAM
SCL_RS00985	SM00448	cheY-homologous receiver domain
SCL_RS00985	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SCL_RS00995	SM00729	Elongator protein 3, MiaB family, Radical SAM
SCL_RS01010	SM00936	Penicillin-binding protein 5, C-terminal domain 
SCL_RS01060	SM00845	GatB domain
SCL_RS01085	SM00387	Histidine kinase-like ATPases
SCL_RS01085	SM00388	His Kinase A (phosphoacceptor) domain
SCL_RS01090	SM00448	cheY-homologous receiver domain
SCL_RS01145	SM00852	Probable molybdopterin binding domain
SCL_RS01150	SM00100	Cyclic nucleotide-monophosphate binding domain
SCL_RS01150	SM00419	helix_turn_helix, cAMP Regulatory protein
SCL_RS01160	SM00852	Probable molybdopterin binding domain
SCL_RS01170	SM00100	Cyclic nucleotide-monophosphate binding domain
SCL_RS01170	SM00419	helix_turn_helix, cAMP Regulatory protein
SCL_RS01175	SM00387	Histidine kinase-like ATPases
SCL_RS01180	SM00448	cheY-homologous receiver domain
SCL_RS01180	SM00862	Transcriptional regulatory protein, C terminal
SCL_RS01215	SM00052	Putative diguanylate phosphodiesterase
SCL_RS01215	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SCL_RS01215	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SCL_RS01215	SM00091	PAS domain
SCL_RS01215	SM00267	diguanylate cyclase
SCL_RS01300	SM00900	SCL_RS01300
SCL_RS01330	SM00344	helix_turn_helix ASNC type
SCL_RS01335	SM00729	Elongator protein 3, MiaB family, Radical SAM
SCL_RS01370	SM00155	Phospholipase D. Active site motifs.
SCL_RS01390	SM00267	diguanylate cyclase
SCL_RS01415	SM00382	ATPases associated with a variety of cellular activities
SCL_RS01425	SM00422	helix_turn_helix, mercury resistance
SCL_RS01490	SM00507	HNH nucleases
SCL_RS01530	SM00729	Elongator protein 3, MiaB family, Radical SAM
SCL_RS01545	SM00100	Cyclic nucleotide-monophosphate binding domain
SCL_RS01545	SM00419	helix_turn_helix, cAMP Regulatory protein
SCL_RS01550	SM00729	Elongator protein 3, MiaB family, Radical SAM
SCL_RS01550	SM00876	Biotin and Thiamin Synthesis associated domain
SCL_RS01585	SM01004	Delta-aminolevulinic acid dehydratase
SCL_RS01600	SM00052	Putative diguanylate phosphodiesterase
SCL_RS01600	SM00091	PAS domain
SCL_RS01600	SM00267	diguanylate cyclase
SCL_RS01620	SM00838	Elongation factor G C-terminus
SCL_RS01650	SM00382	ATPases associated with a variety of cellular activities
SCL_RS01690	SM00226	Low molecular weight phosphatase family
SCL_RS01700	SM00450	Rhodanese Homology Domain
SCL_RS01740	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SCL_RS01755	SM00091	PAS domain
SCL_RS01755	SM00387	Histidine kinase-like ATPases
SCL_RS01755	SM00388	His Kinase A (phosphoacceptor) domain
SCL_RS01760	SM00448	cheY-homologous receiver domain
SCL_RS01760	SM00862	Transcriptional regulatory protein, C terminal
SCL_RS01795	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SCL_RS01795	SM00245	tail specific protease
SCL_RS01810	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SCL_RS01815	SM00450	Rhodanese Homology Domain
SCL_RS01845	SM00382	ATPases associated with a variety of cellular activities
SCL_RS01950	SM00965	Secretin and TonB N terminus short domain
SCL_RS01960	SM00028	Tetratricopeptide repeats
SCL_RS01960	SM00257	Lysin motif
SCL_RS02060	SM00897	FIST N domain
SCL_RS02060	SM01204	SCL_RS02060
SCL_RS02080	SM00331	Sigma factor PP2C-like phosphatases
SCL_RS02085	SM00267	diguanylate cyclase
SCL_RS02090	SM00382	ATPases associated with a variety of cellular activities
SCL_RS02100	SM00346	helix_turn_helix isocitrate lyase regulation
SCL_RS02225	SM00671	Sel1-like repeats.
SCL_RS02235	SM00091	PAS domain
SCL_RS02235	SM00382	ATPases associated with a variety of cellular activities
SCL_RS02265	SM00382	ATPases associated with a variety of cellular activities
SCL_RS02270	SM00382	ATPases associated with a variety of cellular activities
SCL_RS02280	SM00052	Putative diguanylate phosphodiesterase
SCL_RS02280	SM00267	diguanylate cyclase
SCL_RS02325	SM00267	diguanylate cyclase
SCL_RS02355	SM00507	HNH nucleases
SCL_RS02455	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SCL_RS02455	SM00954	Region found in RelA / SpoT proteins
SCL_RS02510	SM00749	bacterial OsmY and nodulation domain
SCL_RS02560	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SCL_RS02590	SM00382	ATPases associated with a variety of cellular activities
SCL_RS02610	SM00382	ATPases associated with a variety of cellular activities
SCL_RS02615	SM00671	Sel1-like repeats.
SCL_RS02620	SM00671	Sel1-like repeats.
SCL_RS02725	SM00842	Cell division protein FtsA
SCL_RS02730	SM00864	Tubulin/FtsZ family, GTPase domain
SCL_RS02730	SM00865	Tubulin/FtsZ family, C-terminal domain
SCL_RS02745	SM00957	SecA DEAD-like domain
SCL_RS02745	SM00958	SecA preprotein cross-linking domain
SCL_RS02770	SM00382	ATPases associated with a variety of cellular activities
SCL_RS02795	SM00387	Histidine kinase-like ATPases
SCL_RS02795	SM00433	TopoisomeraseII
SCL_RS02805	SM00434	DNA Topoisomerase IV
SCL_RS02810	SM00881	CoA binding domain
SCL_RS02875	SM00100	Cyclic nucleotide-monophosphate binding domain
SCL_RS02910	SM00530	Helix-turn-helix XRE-family like proteins 
SCL_RS02970	SM00116	Domain in cystathionine beta-synthase and other proteins.
SCL_RS02975	SM00729	Elongator protein 3, MiaB family, Radical SAM
SCL_RS03015	SM00981	SCL_RS03015
SCL_RS03035	SM00382	ATPases associated with a variety of cellular activities
SCL_RS03040	SM00382	ATPases associated with a variety of cellular activities
SCL_RS03040	SM00962	SRP54-type protein, GTPase domain
SCL_RS03040	SM00963	SRP54-type protein, helical bundle domain
SCL_RS03075	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SCL_RS03075	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SCL_RS03075	SM00091	PAS domain
SCL_RS03075	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SCL_RS03085	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SCL_RS03085	SM01232	SCL_RS03085
SCL_RS03105	SM00382	ATPases associated with a variety of cellular activities
SCL_RS03130	SM00028	Tetratricopeptide repeats
SCL_RS03150	SM00448	cheY-homologous receiver domain
SCL_RS03150	SM00850	LytTr DNA-binding domain
SCL_RS03170	SM00267	diguanylate cyclase
SCL_RS03220	SM00382	ATPases associated with a variety of cellular activities
SCL_RS03220	SM00464	Found in ATP-dependent protease La (LON)
SCL_RS03230	SM01219	SCL_RS03230
SCL_RS03250	SM00881	CoA binding domain
SCL_RS03300	SM00357	Cold shock protein domain
SCL_RS03315	SM00450	Rhodanese Homology Domain
SCL_RS03320	SM00052	Putative diguanylate phosphodiesterase
SCL_RS03320	SM00267	diguanylate cyclase
SCL_RS03320	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SCL_RS03350	SM00360	RNA recognition motif
SCL_RS03355	SM00487	DEAD-like helicases superfamily
SCL_RS03355	SM00490	helicase superfamily c-terminal domain
SCL_RS03375	SM00116	Domain in cystathionine beta-synthase and other proteins.
SCL_RS03385	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SCL_RS03430	SM00382	ATPases associated with a variety of cellular activities
SCL_RS03430	SM01086	C-terminal, D2-small domain, of ClpB protein
SCL_RS03460	SM00232	JAB/MPN domain
SCL_RS03475	SM00937	SCL_RS03475
SCL_RS03490	SM00028	Tetratricopeptide repeats
SCL_RS03510	SM01400	SCL_RS03510
SCL_RS03535	SM00729	Elongator protein 3, MiaB family, Radical SAM
SCL_RS03550	SM00116	Domain in cystathionine beta-synthase and other proteins.
SCL_RS03550	SM01091	Transporter associated domain
SCL_RS03560	SM00052	Putative diguanylate phosphodiesterase
SCL_RS03560	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SCL_RS03560	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SCL_RS03560	SM00091	PAS domain
SCL_RS03560	SM00267	diguanylate cyclase
SCL_RS03565	SM00935	Outer membrane protein (OmpH-like)
SCL_RS03610	SM00316	Ribosomal protein S1-like RNA-binding domain
SCL_RS03645	SM00100	Cyclic nucleotide-monophosphate binding domain
SCL_RS03645	SM00267	diguanylate cyclase
SCL_RS03650	SM00060	Fibronectin type 3 domain
SCL_RS03655	SM00670	Large family of predicted nucleotide-binding domains
SCL_RS03720	SM01400	SCL_RS03720
SCL_RS03745	SM01130	SCL_RS03745
SCL_RS03755	SM00849	Metallo-beta-lactamase superfamily
SCL_RS03760	SM01211	SCL_RS03760
SCL_RS03785	SM01350	SCL_RS03785
SCL_RS03825	SM00382	ATPases associated with a variety of cellular activities
SCL_RS03840	SM00382	ATPases associated with a variety of cellular activities
SCL_RS03870	SM00382	ATPases associated with a variety of cellular activities
SCL_RS03875	SM00052	Putative diguanylate phosphodiesterase
SCL_RS03875	SM00267	diguanylate cyclase
SCL_RS03875	SM00448	cheY-homologous receiver domain
SCL_RS03885	SM00382	ATPases associated with a variety of cellular activities
SCL_RS03905	SM01080	SCL_RS03905
SCL_RS03975	SM00897	FIST N domain
SCL_RS03975	SM01204	SCL_RS03975
SCL_RS03980	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SCL_RS03980	SM00478	endonuclease III
SCL_RS03980	SM00525	SCL_RS03980
SCL_RS04020	SM00342	helix_turn_helix, arabinose operon control protein
SCL_RS04105	SM00507	HNH nucleases
SCL_RS04160	SM00840	SCL_RS04160
SCL_RS04190	SM00917	LeuA allosteric (dimerisation) domain
SCL_RS04195	SM00986	Uracil DNA glycosylase superfamily
SCL_RS04195	SM00987	UreE urease accessory protein, C-terminal domain 
SCL_RS04240	SM00671	Sel1-like repeats.
SCL_RS04255	SM00357	Cold shock protein domain
SCL_RS04340	SM00028	Tetratricopeptide repeats
SCL_RS04405	SM00382	ATPases associated with a variety of cellular activities
SCL_RS04460	SM00382	ATPases associated with a variety of cellular activities
SCL_RS04460	SM00448	cheY-homologous receiver domain
SCL_RS04465	SM00091	PAS domain
SCL_RS04465	SM00387	Histidine kinase-like ATPases
SCL_RS04465	SM00388	His Kinase A (phosphoacceptor) domain
SCL_RS04500	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
SCL_RS04520	SM00904	Riboflavin kinase
SCL_RS04645	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SCL_RS04645	SM00267	diguanylate cyclase
SCL_RS04655	SM00100	Cyclic nucleotide-monophosphate binding domain
SCL_RS04655	SM00419	helix_turn_helix, cAMP Regulatory protein
SCL_RS04670	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
SCL_RS04675	SM00100	Cyclic nucleotide-monophosphate binding domain
SCL_RS04675	SM00419	helix_turn_helix, cAMP Regulatory protein
SCL_RS04680	SM00100	Cyclic nucleotide-monophosphate binding domain
SCL_RS04680	SM00419	helix_turn_helix, cAMP Regulatory protein
SCL_RS04700	SM00267	diguanylate cyclase
SCL_RS04705	SM00422	helix_turn_helix, mercury resistance
SCL_RS04790	SM00448	cheY-homologous receiver domain
SCL_RS04790	SM00862	Transcriptional regulatory protein, C terminal
SCL_RS04795	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SCL_RS04795	SM00387	Histidine kinase-like ATPases
SCL_RS04795	SM00388	His Kinase A (phosphoacceptor) domain
SCL_RS04930	SM00644	SCL_RS04930
SCL_RS04940	SM00855	Phosphoglycerate mutase family
SCL_RS04970	SM00052	Putative diguanylate phosphodiesterase
SCL_RS04970	SM00091	PAS domain
SCL_RS04970	SM00267	diguanylate cyclase
SCL_RS04975	SM00382	ATPases associated with a variety of cellular activities
SCL_RS04990	SM00320	WD40 repeats
SCL_RS05050	SM00968	SMC proteins Flexible Hinge Domain
SCL_RS05055	SM00771	ZipA, C-terminal domain (FtsZ-binding)
SCL_RS05060	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SCL_RS05060	SM00292	breast cancer carboxy-terminal domain
SCL_RS05060	SM00532	Ligase N family
SCL_RS05065	SM01321	SCL_RS05065
SCL_RS05110	SM00481	DNA polymerase alpha chain like domain
SCL_RS05140	SM00363	S4 RNA-binding domain
SCL_RS05160	SM00450	Rhodanese Homology Domain
SCL_RS05170	SM00478	endonuclease III
SCL_RS05170	SM00525	SCL_RS05170
SCL_RS05190	SM00267	diguanylate cyclase
SCL_RS05190	SM00448	cheY-homologous receiver domain
SCL_RS05220	SM00073	Histidine Phosphotransfer domain
SCL_RS05220	SM00387	Histidine kinase-like ATPases
SCL_RS05220	SM00388	His Kinase A (phosphoacceptor) domain
SCL_RS05220	SM00448	cheY-homologous receiver domain
SCL_RS05230	SM00450	Rhodanese Homology Domain
SCL_RS05245	SM00248	ankyrin repeats
SCL_RS05285	SM00606	Cellulose Binding Domain Type IV
SCL_RS05285	SM00710	Parallel beta-helix repeats
SCL_RS05295	SM00487	DEAD-like helicases superfamily
SCL_RS05295	SM00490	helicase superfamily c-terminal domain
SCL_RS05370	SM00974	SCL_RS05370
SCL_RS05475	SM00100	Cyclic nucleotide-monophosphate binding domain
SCL_RS05475	SM00419	helix_turn_helix, cAMP Regulatory protein
SCL_RS05505	SM01321	SCL_RS05505
SCL_RS05520	SM01323	SCL_RS05520
SCL_RS05535	SM01012	SCL_RS05535
SCL_RS05550	SM00382	ATPases associated with a variety of cellular activities
SCL_RS05580	SM00267	diguanylate cyclase
SCL_RS05580	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SCL_RS05610	SM00220	Serine/Threonine protein kinases, catalytic domain
SCL_RS05670	SM01091	Transporter associated domain
SCL_RS05715	SM00382	ATPases associated with a variety of cellular activities
SCL_RS05715	SM00962	SRP54-type protein, GTPase domain
SCL_RS05715	SM00963	SRP54-type protein, helical bundle domain
SCL_RS05725	SM00729	Elongator protein 3, MiaB family, Radical SAM
SCL_RS05750	SM00267	diguanylate cyclase
SCL_RS05750	SM00448	cheY-homologous receiver domain
SCL_RS05780	SM00244	prohibitin homologues
SCL_RS05795	SM00434	DNA Topoisomerase IV
SCL_RS05810	SM00830	Chorismate mutase type II
SCL_RS05835	SM00316	Ribosomal protein S1-like RNA-binding domain
SCL_RS05840	SM00411	bacterial (prokaryotic) histone like domain
SCL_RS05850	SM00028	Tetratricopeptide repeats
SCL_RS05855	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SCL_RS05870	SM00984	UDP binding domain
SCL_RS05875	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SCL_RS05905	SM00382	ATPases associated with a variety of cellular activities
SCL_RS05925	SM00858	SCL_RS05925
SCL_RS05945	SM00116	Domain in cystathionine beta-synthase and other proteins.
SCL_RS06065	SM00984	UDP binding domain
SCL_RS06100	SM00487	DEAD-like helicases superfamily
SCL_RS06100	SM00490	helicase superfamily c-terminal domain
SCL_RS06100	SM00982	SCL_RS06100
SCL_RS06100	SM01058	CarD-like/TRCF domain
SCL_RS06105	SM01058	CarD-like/TRCF domain
SCL_RS06135	SM00463	Small MutS-related domain
SCL_RS06145	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SCL_RS06145	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
SCL_RS06150	SM00843	SCL_RS06150
SCL_RS06160	SM00382	ATPases associated with a variety of cellular activities
SCL_RS06165	SM00671	Sel1-like repeats.
SCL_RS06205	SM00421	helix_turn_helix, Lux Regulon
SCL_RS06205	SM00448	cheY-homologous receiver domain
SCL_RS06210	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SCL_RS06210	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SCL_RS06210	SM00387	Histidine kinase-like ATPases
SCL_RS06310	SM00450	Rhodanese Homology Domain
SCL_RS06340	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
SCL_RS06350	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
SCL_RS06355	SM00116	Domain in cystathionine beta-synthase and other proteins.
SCL_RS06375	SM00671	Sel1-like repeats.
SCL_RS06385	SM00937	SCL_RS06385
SCL_RS06410	SM00244	prohibitin homologues
SCL_RS06415	SM00244	prohibitin homologues
SCL_RS06430	SM00788	Adenylosuccinate synthetase
SCL_RS06445	SM00316	Ribosomal protein S1-like RNA-binding domain
SCL_RS06445	SM00357	Cold shock protein domain
SCL_RS06445	SM00955	SCL_RS06445
SCL_RS06450	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SCL_RS06480	SM00382	ATPases associated with a variety of cellular activities
SCL_RS06485	SM01005	Alanine racemase, C-terminal domain
SCL_RS06490	SM00382	ATPases associated with a variety of cellular activities
SCL_RS06495	SM00240	Forkhead associated domain
SCL_RS06500	SM00331	Sigma factor PP2C-like phosphatases
SCL_RS06500	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SCL_RS06520	SM00052	Putative diguanylate phosphodiesterase
SCL_RS06520	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SCL_RS06520	SM00091	PAS domain
SCL_RS06520	SM00267	diguanylate cyclase
SCL_RS06630	SM00854	Bacterial capsule synthesis protein PGA_cap
SCL_RS06640	SM00382	ATPases associated with a variety of cellular activities
SCL_RS06650	SM00849	Metallo-beta-lactamase superfamily
SCL_RS06665	SM00382	ATPases associated with a variety of cellular activities
SCL_RS06685	SM00226	Low molecular weight phosphatase family
SCL_RS06690	SM00316	Ribosomal protein S1-like RNA-binding domain
SCL_RS06695	SM00363	S4 RNA-binding domain
SCL_RS06725	SM00878	Biotin carboxylase C-terminal domain
SCL_RS06750	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SCL_RS06755	SM00822	SCL_RS06755
SCL_RS06765	SM00825	Beta-ketoacyl synthase
SCL_RS06810	SM00642	Alpha-amylase domain
SCL_RS06840	SM00769	Water Stress and Hypersensitive response
SCL_RS06895	SM00257	Lysin motif
SCL_RS06925	SM00382	ATPases associated with a variety of cellular activities
SCL_RS06930	SM00487	DEAD-like helicases superfamily
SCL_RS06930	SM00490	helicase superfamily c-terminal domain
SCL_RS06945	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SCL_RS06960	SM00382	ATPases associated with a variety of cellular activities
SCL_RS07000	SM00100	Cyclic nucleotide-monophosphate binding domain
SCL_RS07000	SM00267	diguanylate cyclase
SCL_RS07025	SM00240	Forkhead associated domain
SCL_RS07035	SM00903	Flavin reductase like domain
SCL_RS07065	SM00363	S4 RNA-binding domain
SCL_RS07085	SM00530	Helix-turn-helix XRE-family like proteins 
SCL_RS07125	SM00487	DEAD-like helicases superfamily
SCL_RS07125	SM00490	helicase superfamily c-terminal domain
SCL_RS07150	SM00267	diguanylate cyclase
SCL_RS07155	SM00237	Domains in Na-Ca exchangers and integrin-beta4
SCL_RS07180	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SCL_RS07180	SM00465	GIY-YIG type nucleases (URI domain)
SCL_RS07185	SM00986	Uracil DNA glycosylase superfamily
SCL_RS07185	SM00987	UreE urease accessory protein, C-terminal domain 
SCL_RS07235	SM00448	cheY-homologous receiver domain
SCL_RS07235	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SCL_RS07240	SM00267	diguanylate cyclase
SCL_RS07245	SM00073	Histidine Phosphotransfer domain
SCL_RS07245	SM00387	Histidine kinase-like ATPases
SCL_RS07245	SM00388	His Kinase A (phosphoacceptor) domain
SCL_RS07245	SM00448	cheY-homologous receiver domain
SCL_RS07255	SM00825	Beta-ketoacyl synthase
SCL_RS07265	SM00729	Elongator protein 3, MiaB family, Radical SAM
SCL_RS07270	SM00448	cheY-homologous receiver domain
SCL_RS07280	SM00138	Methyltransferase, chemotaxis proteins 
SCL_RS07285	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SCL_RS07285	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SCL_RS07290	SM00260	Two component signalling adaptor domain
SCL_RS07295	SM00073	Histidine Phosphotransfer domain
SCL_RS07295	SM00260	Two component signalling adaptor domain
SCL_RS07295	SM00387	Histidine kinase-like ATPases
SCL_RS07295	SM01231	SCL_RS07295
SCL_RS07300	SM00448	cheY-homologous receiver domain
SCL_RS07305	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SCL_RS07340	SM00257	Lysin motif
SCL_RS07360	SM00422	helix_turn_helix, mercury resistance
SCL_RS07365	SM00411	bacterial (prokaryotic) histone like domain
SCL_RS07370	SM00873	B3/4 domain
SCL_RS07370	SM00874	tRNA synthetase B5 domain
SCL_RS07370	SM00896	Ferredoxin-fold anticodon binding domain
SCL_RS07395	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SCL_RS07405	SM00487	DEAD-like helicases superfamily
SCL_RS07405	SM00490	helicase superfamily c-terminal domain
SCL_RS07495	SM00358	Double-stranded RNA binding motif
SCL_RS07495	SM00535	Ribonuclease III family
SCL_RS07515	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SCL_RS07605	SM01192	SCL_RS07605
SCL_RS07605	SM01193	SCL_RS07605
SCL_RS07620	SM00977	TilS substrate C-terminal domain
SCL_RS07630	SM00481	DNA polymerase alpha chain like domain
SCL_RS07635	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SCL_RS07645	SM00382	ATPases associated with a variety of cellular activities
SCL_RS07730	SM00028	Tetratricopeptide repeats
SCL_RS07735	SM00028	Tetratricopeptide repeats
SCL_RS07740	SM00028	Tetratricopeptide repeats
SCL_RS07765	SM00028	Tetratricopeptide repeats
SCL_RS07770	SM00028	Tetratricopeptide repeats
SCL_RS07795	SM00028	Tetratricopeptide repeats
SCL_RS07820	SM00429	ig-like, plexins, transcription factors
SCL_RS07835	SM00382	ATPases associated with a variety of cellular activities
SCL_RS07835	SM00448	cheY-homologous receiver domain
SCL_RS07840	SM00387	Histidine kinase-like ATPases
SCL_RS07845	SM00028	Tetratricopeptide repeats
SCL_RS07910	SM00710	Parallel beta-helix repeats
SCL_RS07970	SM00382	ATPases associated with a variety of cellular activities
SCL_RS08015	SM00935	Outer membrane protein (OmpH-like)
SCL_RS08025	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SCL_RS08070	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SCL_RS08075	SM00382	ATPases associated with a variety of cellular activities
SCL_RS08080	SM00382	ATPases associated with a variety of cellular activities
SCL_RS08100	SM00257	Lysin motif
SCL_RS08100	SM00646	SCL_RS08100
SCL_RS08125	SM00479	SCL_RS08125
SCL_RS08150	SM00493	SCL_RS08150
SCL_RS08160	SM00382	ATPases associated with a variety of cellular activities
SCL_RS08190	SM00062	Bacterial periplasmic substrate-binding proteins
SCL_RS08205	SM00116	Domain in cystathionine beta-synthase and other proteins.
SCL_RS08205	SM01240	SCL_RS08205
SCL_RS08225	SM00220	Serine/Threonine protein kinases, catalytic domain
SCL_RS08225	SM00320	WD40 repeats
SCL_RS08230	SM00382	ATPases associated with a variety of cellular activities
SCL_RS08235	SM00564	beta-propeller repeat
SCL_RS08260	SM00028	Tetratricopeptide repeats
SCL_RS08285	SM00271	DnaJ molecular chaperone homology domain
SCL_RS08355	SM00267	diguanylate cyclase
SCL_RS08370	SM00052	Putative diguanylate phosphodiesterase
SCL_RS08370	SM00091	PAS domain
SCL_RS08370	SM00267	diguanylate cyclase
SCL_RS08385	SM00060	Fibronectin type 3 domain
SCL_RS08505	SM00382	ATPases associated with a variety of cellular activities
SCL_RS08535	SM00271	DnaJ molecular chaperone homology domain
SCL_RS08565	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SCL_RS08575	SM00382	ATPases associated with a variety of cellular activities
SCL_RS08600	SM00487	DEAD-like helicases superfamily
SCL_RS08600	SM00491	SCL_RS08600
SCL_RS08630	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SCL_RS08630	SM00091	PAS domain
SCL_RS08630	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SCL_RS08630	SM00387	Histidine kinase-like ATPases
SCL_RS08630	SM00388	His Kinase A (phosphoacceptor) domain
SCL_RS08635	SM00382	ATPases associated with a variety of cellular activities
SCL_RS08635	SM00448	cheY-homologous receiver domain
SCL_RS08645	SM00052	Putative diguanylate phosphodiesterase
SCL_RS08645	SM00062	Bacterial periplasmic substrate-binding proteins
SCL_RS08645	SM00267	diguanylate cyclase
SCL_RS08705	SM00749	bacterial OsmY and nodulation domain
SCL_RS08745	SM00855	Phosphoglycerate mutase family
SCL_RS08760	SM00450	Rhodanese Homology Domain
SCL_RS08855	SM00155	Phospholipase D. Active site motifs.
SCL_RS08860	SM00100	Cyclic nucleotide-monophosphate binding domain
SCL_RS08860	SM00419	helix_turn_helix, cAMP Regulatory protein
SCL_RS08865	SM00091	PAS domain
SCL_RS08865	SM00267	diguanylate cyclase
SCL_RS08870	SM00421	helix_turn_helix, Lux Regulon
SCL_RS08870	SM00448	cheY-homologous receiver domain
SCL_RS08875	SM00387	Histidine kinase-like ATPases
SCL_RS08880	SM00331	Sigma factor PP2C-like phosphatases
SCL_RS08885	SM00387	Histidine kinase-like ATPases
SCL_RS08915	SM00824	Thioesterase
SCL_RS08990	SM00052	Putative diguanylate phosphodiesterase
SCL_RS08990	SM00267	diguanylate cyclase
SCL_RS08995	SM00387	Histidine kinase-like ATPases
SCL_RS08995	SM00388	His Kinase A (phosphoacceptor) domain
SCL_RS08995	SM00448	cheY-homologous receiver domain
SCL_RS09000	SM00382	ATPases associated with a variety of cellular activities
SCL_RS09010	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SCL_RS09010	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SCL_RS09015	SM01248	SCL_RS09015
SCL_RS09020	SM00382	ATPases associated with a variety of cellular activities
SCL_RS09025	SM00100	Cyclic nucleotide-monophosphate binding domain
SCL_RS09025	SM00419	helix_turn_helix, cAMP Regulatory protein
SCL_RS09030	SM00267	diguanylate cyclase
SCL_RS09040	SM01068	Putative carbohydrate binding domain
SCL_RS09050	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SCL_RS09050	SM00091	PAS domain
SCL_RS09050	SM00387	Histidine kinase-like ATPases
SCL_RS09050	SM00388	His Kinase A (phosphoacceptor) domain
SCL_RS09050	SM00448	cheY-homologous receiver domain
SCL_RS09055	SM00448	cheY-homologous receiver domain
SCL_RS09060	SM00419	helix_turn_helix, cAMP Regulatory protein
SCL_RS09075	SM00749	bacterial OsmY and nodulation domain
SCL_RS09095	SM00729	Elongator protein 3, MiaB family, Radical SAM
SCL_RS09140	SM00382	ATPases associated with a variety of cellular activities
SCL_RS09145	SM00479	SCL_RS09145
SCL_RS09165	SM00849	Metallo-beta-lactamase superfamily
SCL_RS09170	SM00257	Lysin motif
SCL_RS09175	SM00382	ATPases associated with a variety of cellular activities
SCL_RS09215	SM00411	bacterial (prokaryotic) histone like domain
SCL_RS09220	SM00382	ATPases associated with a variety of cellular activities
SCL_RS09220	SM00464	Found in ATP-dependent protease La (LON)
SCL_RS09225	SM00382	ATPases associated with a variety of cellular activities
SCL_RS09225	SM00994	ClpX C4-type zinc finger
SCL_RS09225	SM01086	C-terminal, D2-small domain, of ClpB protein
SCL_RS09305	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SCL_RS09310	SM01329	SCL_RS09310
SCL_RS09380	SM01018	B12 binding domain
SCL_RS09385	SM00052	Putative diguanylate phosphodiesterase
SCL_RS09385	SM00267	diguanylate cyclase
SCL_RS09385	SM01079	SCL_RS09385
SCL_RS09405	SM00448	cheY-homologous receiver domain
SCL_RS09405	SM00862	Transcriptional regulatory protein, C terminal
SCL_RS09410	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SCL_RS09410	SM00091	PAS domain
SCL_RS09410	SM00387	Histidine kinase-like ATPases
SCL_RS09410	SM00388	His Kinase A (phosphoacceptor) domain
SCL_RS09410	SM00448	cheY-homologous receiver domain
SCL_RS09485	SM00267	diguanylate cyclase
SCL_RS09490	SM00487	DEAD-like helicases superfamily
SCL_RS09490	SM00490	helicase superfamily c-terminal domain
SCL_RS09490	SM00847	Helicase associated domain (HA2)  Add an annotation
SCL_RS09500	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SCL_RS09505	SM00382	ATPases associated with a variety of cellular activities
SCL_RS09505	SM01086	C-terminal, D2-small domain, of ClpB protein
SCL_RS09510	SM00563	Phosphate acyltransferases
SCL_RS09520	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SCL_RS09540	SM00267	diguanylate cyclase
SCL_RS09585	SM00363	S4 RNA-binding domain
SCL_RS09595	SM00938	Nitrogen regulatory protein P-II
SCL_RS09605	SM00881	CoA binding domain
SCL_RS09615	SM00382	ATPases associated with a variety of cellular activities
SCL_RS09670	SM00316	Ribosomal protein S1-like RNA-binding domain
SCL_RS09675	SM00382	ATPases associated with a variety of cellular activities
SCL_RS09675	SM01086	C-terminal, D2-small domain, of ClpB protein
SCL_RS09685	SM00357	Cold shock protein domain
SCL_RS09690	SM01329	SCL_RS09690
SCL_RS09755	SM00052	Putative diguanylate phosphodiesterase
SCL_RS09755	SM00091	PAS domain
SCL_RS09755	SM00267	diguanylate cyclase
SCL_RS09755	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SCL_RS09770	SM00382	ATPases associated with a variety of cellular activities
SCL_RS09830	SM00267	diguanylate cyclase
SCL_RS09845	SM00052	Putative diguanylate phosphodiesterase
SCL_RS09845	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SCL_RS09845	SM00267	diguanylate cyclase
SCL_RS09845	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SCL_RS09865	SM00387	Histidine kinase-like ATPases
SCL_RS09865	SM00388	His Kinase A (phosphoacceptor) domain
SCL_RS09870	SM00448	cheY-homologous receiver domain
SCL_RS09875	SM00052	Putative diguanylate phosphodiesterase
SCL_RS09875	SM00267	diguanylate cyclase
SCL_RS09875	SM00448	cheY-homologous receiver domain
SCL_RS09880	SM00267	diguanylate cyclase
SCL_RS09880	SM00448	cheY-homologous receiver domain
SCL_RS09915	SM00357	Cold shock protein domain
SCL_RS10010	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SCL_RS10015	SM01321	SCL_RS10015
SCL_RS10020	SM00316	Ribosomal protein S1-like RNA-binding domain
SCL_RS10020	SM00322	K homology RNA-binding domain
SCL_RS10025	SM01387	SCL_RS10025
SCL_RS10045	SM00316	Ribosomal protein S1-like RNA-binding domain
SCL_RS10120	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
SCL_RS10125	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
SCL_RS10180	SM00382	ATPases associated with a variety of cellular activities
SCL_RS10190	SM01103	SCL_RS10190
SCL_RS10200	SM00851	MGS-like domain
SCL_RS10200	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SCL_RS10205	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
SCL_RS10210	SM00052	Putative diguanylate phosphodiesterase
SCL_RS10210	SM00091	PAS domain
SCL_RS10210	SM00267	diguanylate cyclase
SCL_RS10265	SM01043	Bacterial transcriptional activator domain
SCL_RS10270	SM00271	DnaJ molecular chaperone homology domain
SCL_RS10365	SM00382	ATPases associated with a variety of cellular activities
SCL_RS10370	SM00382	ATPases associated with a variety of cellular activities
SCL_RS10415	SM00861	Transketolase, pyrimidine binding domain
SCL_RS10425	SM00052	Putative diguanylate phosphodiesterase
SCL_RS10425	SM00267	diguanylate cyclase
SCL_RS10495	SM00450	Rhodanese Homology Domain
SCL_RS10555	SM00052	Putative diguanylate phosphodiesterase
SCL_RS10555	SM00267	diguanylate cyclase
SCL_RS10555	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SCL_RS10580	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SCL_RS10580	SM00091	PAS domain
SCL_RS10580	SM00267	diguanylate cyclase
SCL_RS10605	SM00382	ATPases associated with a variety of cellular activities
SCL_RS10625	SM00422	helix_turn_helix, mercury resistance
SCL_RS10645	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SCL_RS10650	SM00506	Appr-1"-p processing enzyme
SCL_RS10685	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SCL_RS10775	SM00382	ATPases associated with a variety of cellular activities
SCL_RS10800	SM00382	ATPases associated with a variety of cellular activities
SCL_RS10810	SM00028	Tetratricopeptide repeats
SCL_RS10830	SM00479	SCL_RS10830
SCL_RS10835	SM00116	Domain in cystathionine beta-synthase and other proteins.
SCL_RS10865	SM00116	Domain in cystathionine beta-synthase and other proteins.
SCL_RS10885	SM00382	ATPases associated with a variety of cellular activities
SCL_RS10925	SM00116	Domain in cystathionine beta-synthase and other proteins.
SCL_RS10925	SM00924	MgtE intracellular N domain
SCL_RS10940	SM00382	ATPases associated with a variety of cellular activities
SCL_RS10960	SM00028	Tetratricopeptide repeats
SCL_RS10995	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SCL_RS11090	SM00382	ATPases associated with a variety of cellular activities
SCL_RS11095	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SCL_RS11135	SM00834	Putative regulatory protein
SCL_RS11140	SM00411	bacterial (prokaryotic) histone like domain
SCL_RS11170	SM00052	Putative diguanylate phosphodiesterase
SCL_RS11170	SM00091	PAS domain
SCL_RS11170	SM00267	diguanylate cyclase
SCL_RS11170	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SCL_RS11185	SM00662	RNA polymerases D
SCL_RS11190	SM00363	S4 RNA-binding domain
SCL_RS11190	SM01390	SCL_RS11190
SCL_RS11255	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SCL_RS11260	SM01374	SCL_RS11260
SCL_RS11280	SM00322	K homology RNA-binding domain
SCL_RS11295	SM01382	SCL_RS11295
SCL_RS11295	SM01383	SCL_RS11295
SCL_RS11315	SM01403	SCL_RS11315
SCL_RS11325	SM00838	Elongation factor G C-terminus
SCL_RS11325	SM00889	Elongation factor G, domain IV
SCL_RS11340	SM00663	RNA polymerase I subunit A N-terminus
SCL_RS11365	SM00649	Ribosomal protein L11/L12
SCL_RS11370	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SCL_RS11370	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SCL_RS11485	SM00841	Elongation factor P, C-terminal
SCL_RS11485	SM01185	SCL_RS11485
SCL_RS11535	SM00363	S4 RNA-binding domain
SCL_RS11565	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SCL_RS11690	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SCL_RS11690	SM00091	PAS domain
SCL_RS11690	SM00267	diguanylate cyclase
SCL_RS11735	SM01001	AIR carboxylase
SCL_RS11830	SM00382	ATPases associated with a variety of cellular activities
SCL_RS11865	SM00342	helix_turn_helix, arabinose operon control protein
SCL_RS11870	SM00947	Carbonic anhydrase
SCL_RS11890	SM00886	Stress responsive A/B Barrel Domain
SCL_RS11900	SM00382	ATPases associated with a variety of cellular activities
SCL_RS11905	SM00961	Ribulose bisphosphate carboxylase, small chain
SCL_RS11930	SM00327	von Willebrand factor (vWF) type A domain
SCL_RS11945	SM00961	Ribulose bisphosphate carboxylase, small chain
SCL_RS11985	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SCL_RS11990	SM00861	Transketolase, pyrimidine binding domain
SCL_RS12025	SM00073	Histidine Phosphotransfer domain
SCL_RS12025	SM00260	Two component signalling adaptor domain
SCL_RS12025	SM00387	Histidine kinase-like ATPases
SCL_RS12025	SM00448	cheY-homologous receiver domain
SCL_RS12025	SM01231	SCL_RS12025
SCL_RS12030	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SCL_RS12035	SM00260	Two component signalling adaptor domain
SCL_RS12040	SM00448	cheY-homologous receiver domain
SCL_RS12045	SM00448	cheY-homologous receiver domain
SCL_RS12070	SM00732	Likely ribonuclease with RNase H fold.
SCL_RS12090	SM00382	ATPases associated with a variety of cellular activities
SCL_RS12095	SM00382	ATPases associated with a variety of cellular activities
SCL_RS12110	SM01152	SCL_RS12110
SCL_RS12125	SM00671	Sel1-like repeats.
SCL_RS12205	SM00248	ankyrin repeats
SCL_RS12210	SM00357	Cold shock protein domain
SCL_RS12250	SM00116	Domain in cystathionine beta-synthase and other proteins.
SCL_RS12255	SM00829	Enoylreductase
SCL_RS12260	SM00220	Serine/Threonine protein kinases, catalytic domain
SCL_RS12260	SM00320	WD40 repeats
SCL_RS12275	SM00564	beta-propeller repeat
SCL_RS12275	SM00635	Bacterial Ig-like domain 2
SCL_RS12280	SM00342	helix_turn_helix, arabinose operon control protein
SCL_RS12420	SM00267	diguanylate cyclase
SCL_RS12420	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SCL_RS12425	SM00220	Serine/Threonine protein kinases, catalytic domain
SCL_RS12425	SM00671	Sel1-like repeats.
SCL_RS12455	SM00327	von Willebrand factor (vWF) type A domain
SCL_RS12510	SM00650	Ribosomal RNA adenine dimethylases
SCL_RS12520	SM00563	Phosphate acyltransferases
SCL_RS12535	SM00836	DALR anticodon binding domain
SCL_RS12565	SM01230	SCL_RS12565
SCL_RS12570	SM00091	PAS domain
SCL_RS12570	SM00387	Histidine kinase-like ATPases
SCL_RS12570	SM00388	His Kinase A (phosphoacceptor) domain
SCL_RS12575	SM00382	ATPases associated with a variety of cellular activities
SCL_RS12575	SM00448	cheY-homologous receiver domain
SCL_RS12635	SM01011	Aminopeptidase P, N-terminal domain
SCL_RS12700	SM00831	Cation transporter/ATPase, N-terminus
SCL_RS12705	SM00382	ATPases associated with a variety of cellular activities
SCL_RS12705	SM00448	cheY-homologous receiver domain
SCL_RS12710	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SCL_RS12710	SM00387	Histidine kinase-like ATPases
SCL_RS12710	SM00388	His Kinase A (phosphoacceptor) domain
SCL_RS12745	SM00360	RNA recognition motif
SCL_RS12825	SM00387	Histidine kinase-like ATPases
SCL_RS12825	SM00388	His Kinase A (phosphoacceptor) domain
SCL_RS12830	SM00448	cheY-homologous receiver domain
SCL_RS12830	SM00862	Transcriptional regulatory protein, C terminal
SCL_RS12870	SM00900	SCL_RS12870
SCL_RS13000	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SCL_RS13080	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SCL_RS13115	SM00341	Helicase and RNase D C-terminal
SCL_RS13115	SM00487	DEAD-like helicases superfamily
SCL_RS13115	SM00490	helicase superfamily c-terminal domain
SCL_RS13115	SM00956	SCL_RS13115
SCL_RS13120	SM00100	Cyclic nucleotide-monophosphate binding domain
SCL_RS13205	SM00530	Helix-turn-helix XRE-family like proteins 
SCL_RS13215	SM00650	Ribosomal RNA adenine dimethylases
SCL_RS13220	SM00450	Rhodanese Homology Domain
SCL_RS13305	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SCL_RS13305	SM00450	Rhodanese Homology Domain
SCL_RS13350	SM00883	Chaperonin 10 Kd subunit
SCL_RS13385	SM00878	Biotin carboxylase C-terminal domain
SCL_RS13410	SM00798	AICARFT/IMPCHase bienzyme
SCL_RS13410	SM00851	MGS-like domain
SCL_RS13420	SM01209	SCL_RS13420
SCL_RS13420	SM01210	SCL_RS13420
SCL_RS13445	SM00244	prohibitin homologues
SCL_RS13460	SM01007	Class II Aldolase and Adducin N-terminal domain
SCL_RS13500	SM00100	Cyclic nucleotide-monophosphate binding domain
SCL_RS13500	SM00419	helix_turn_helix, cAMP Regulatory protein
SCL_RS13520	SM00887	Ethylbenzene dehydrogenase
SCL_RS13540	SM00487	DEAD-like helicases superfamily
SCL_RS13540	SM00490	helicase superfamily c-terminal domain
SCL_RS13550	SM00357	Cold shock protein domain
SCL_RS13550	SM00382	ATPases associated with a variety of cellular activities
SCL_RS13550	SM00959	Rho termination factor, N-terminal domain
SCL_RS13560	SM00318	Staphylococcal nuclease homologues
SCL_RS13570	SM00919	Malic enzyme, NAD binding domain
SCL_RS13570	SM01274	SCL_RS13570
SCL_RS13625	SM00710	Parallel beta-helix repeats
SCL_RS13625	SM00869	Autotransporter beta-domain
SCL_RS13630	SM00028	Tetratricopeptide repeats
SCL_RS13635	SM00028	Tetratricopeptide repeats
SCL_RS13670	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SCL_RS13670	SM00474	3'-5' exonuclease
SCL_RS13670	SM00475	5'-3' exonuclease
SCL_RS13670	SM00482	DNA polymerase A domain
SCL_RS13725	SM00267	diguanylate cyclase
SCL_RS13755	SM00382	ATPases associated with a variety of cellular activities
SCL_RS13795	SM00116	Domain in cystathionine beta-synthase and other proteins.
SCL_RS13800	SM00671	Sel1-like repeats.
SCL_RS13805	SM00470	ParB-like nuclease domain
SCL_RS13830	SM01228	SCL_RS13830
SCL_RS13835	SM00382	ATPases associated with a variety of cellular activities
SCL_RS13845	SM00460	Transglutaminase/protease-like homologues
SCL_RS13865	SM01234	SCL_RS13865
