        gyrB    5260 ..    5274 +  -7.2  -4.01419   AGAACGCCCTCGACG               TATCCA ACC TGGATA               TTTGATTCGTTCGTA  71 6
 SCL_RS00065 NONE
 SCL_RS00070   15245 ..   15255 +    -4  -3.71888   TGCTTACTTCCAGAG                 GTAA TTC TTAC                 TTGTTCAATATCGTT  56 364
 SCL_RS00080   16168 ..   16192 +  -5.6  -5.75342   CATTTACCGCAGCAC          CGGGCCGG CGTCCAAAA CCGGCCCA          TTTTTTTTCAAACGC 100 112
 SCL_RS00095 NONE
 SCL_RS00100   20079 ..   20094 +    -6    -3.679   CTTCAAGACCCGCCC              CCCGGG CGAG CCCAGG               TTGTATTAGCCGTTT  60 1
 SCL_RS00105   21018 ..   21041 +  -6.6  -3.68506   AGGCCTTTTCGAACT          GGTCGC-GCGC GTC GCGCAGCGGCA          TTTCCATGAGTGTTG  62 510
 SCL_RS00145   29311 ..   29350 +  -9.9  -3.28712   AAATTATTCCACCCT  GGGTTAGACTGCGCACC ATGACC GGCGCGCCGTCCAACTC   TTATGCCCGGGCGAA  68 44
        dprA NONE
 SCL_RS00155   30977 ..   30992 +  -5.4  -3.51708   TGGTGTTCGACGAAA              TGCAGG GCCA TCTGCA               TTGATTTCCAACATC  55 6
 SCL_RS00160   33518 ..   33532 +  -3.4  -4.56597   AGTTTGAAACGGTTC               AGGCGG TGA TCGCCA               TTTTTACGGCAGCGA  67 34
 SCL_RS00170   35607 ..   35644 +  -8.4  -3.53012   ACGGCGTTCACGTTC   TCGCGCACCGGCGGGGA CCGGA TATCGGCCGGTGCG-GA   TTTGAGCCACAGCGC  63 150
 SCL_RS00185   38130 ..   38159 +  -2.1  -3.93057   CAAAATTATCCGTGT       GAATCCGTGTTCA TCTG TGGTTACGAATTC        TTTGCTGATTTTCAG  54 105
 SCL_RS00190 NONE
         mpl NONE
 SCL_RS00200   40941 ..   40956 +    -6  -2.75521   TGGTGCACCGCCACC              CCCCGG CATC CCGGCG               ATTTGACGCTGTCAT  50 157
        sucA NONE
 SCL_RS00210 NONE
        lpdA   46640 ..   46665 + -11.9  -3.64703   GGAACATCAGTCAAA         CAAAAAGCCCC AAAA GGGGCCTTTTG          TTTGACTGGCGCGCC  83 68
 SCL_RS00225   47930 ..   47945 + -11.8  -5.86332   TGGTATTGAAAAAAA              GCGGCC GCAA GGCCGC               TTTTTTTTGGATTGG 100 50
 SCL_RS00240   50879 ..   50900 + -18.7  -3.73224   TAAATACGTGACAAA           GCCGGCCGG AATC CCGGCCGGC            TTTGCTCCCAAGTCC 100 38
 SCL_RS00245 NONE
 SCL_RS00250   52796 ..   52814 + -17.4  -5.86061   TTCCTGGAAATTATA             CGGGCGCC TCG GGCGCCCG             TTTTTTTTGGTGAAG 100 52
 SCL_RS00265   56435 ..   56453 +    -6  -4.58685   GGGGCTTTGCCGGTT             CCGGTT CTTTTTT AACCGG             TTTTTCCGCAGGTTT  76 403
 SCL_RS00290 NONE
 SCL_RS00295 NONE
 SCL_RS00300 NONE
 SCL_RS00305 NONE
 SCL_RS00310   67652 ..   67691 + -15.6  -3.96624   CTGCGCTGAGCCTTC  CCTGACAACCCCGCCGCC GAAT GGCGGCGGGGTTGCTTGA   TTTATGGTCGGGATG 100 32
 SCL_RS00315 NONE
 SCL_RS00320 NONE
 SCL_RS00325   70665 ..   70682 + -10.5  -3.09823   ACGGGTTCCATTGAA             CCGGCCT CGGT GGGCCGG              TATACTTTTCGCCCC  69 98
 SCL_RS00330 NONE
        gltD   76863 ..   76916 +  -8.1  -3.06261   AATCTACCGCCAAGA CGCCAAGAGCGCCAAGAAAGCAA CTTCAATC TTAAAATCTCGGCGCTCTTGGCG TCTTGGCGGTTCAAA  60 47
 SCL_RS00340 NONE
 SCL_RS00345   78508 ..   78526 +  -3.8  -4.09628   CATGTTGCATGCGCC             GGTTTCGC CTT GTGAAACA             TTGTTATTTGGCATG  60 89
 SCL_RS00350   80063 ..   80079 +  -5.7  -3.28712   CGGCGGCGCCTGAAT              CCGGCTG CGG CGGCGGG              TTGTGAAGCGCCCGC  54 28
 SCL_RS00355   81546 ..   81591 + -12.4  -3.29144   TACAACCGCATGGTC GTGGCGCTGCCGACGGCCTG ACCGCA CCCGCCGTTGGCGCCGCCGC TTCTGGCCGGCCTCC  78 5
 SCL_RS00360   82184 ..   82216 +    -7  -2.82635   GGATTCCGGACTCCA      CGCGGGAGTCAAAA TCACC TTTTAACATCCGCG      TCTCGTCATCCCGGT  52 1
 SCL_RS00365 NONE
 SCL_RS00370 NONE
 SCL_RS00375   85951 ..   85968 + -14.1  -3.44794   ACAAATAAAAAACAA             GGGCGGC TGGC GCCGCCC              TTGTGGTACTGCGTT  95 513
 SCL_RS00405   93226 ..   93238 +  -3.4  -4.84359   AAACAGCAGCGCGCC                CATG ATCGC CATG                TTTTTCTGGAACTGG  75 142
 SCL_RS00415   95140 ..   95165 + -10.5  -2.89564   TTTCCTGTGATAGAG         T-CGTGGCATGG TAG CCATGCCGCGCA         TCTATCAGGTCGCAA  68 117
 SCL_RS00420   97744 ..   97756 +  -3.3  -2.70932   ATACCACAACTCTTC                CGCCA GCT TGGCA                TCCTTCCCCAGGCCG  40 415
 SCL_RS00430 NONE
 SCL_RS00435 NONE
 SCL_RS00440  100718 ..  100750 + -11.3  -3.36983   GCGCGGCAACCGGAT      TTCGCCGGCTGGT CAGGTCA GCCGGTCGGCGAA      TTCGTTCAGCATTTT  75 46
 SCL_RS00450  101993 ..  102022 + -22.3  -3.02144   TCTAGTTCTGAACGG       CCGGTCTTCGGAC AACC GTCCGAAGACCGG        TGTTCCGCGAGCTAA 100 36
 SCL_RS00455 NONE
 SCL_RS00460 NONE
 SCL_RS00465  104132 ..  104142 +  -4.6  -3.62597   GCAACGGATTACTGC                 GCGG CCT TCGC                 TTCTTCCGGAATCAC  55 279
 SCL_RS00475 NONE
 SCL_RS00540 NONE
 SCL_RS00545  122137 ..  122151 +  -8.5   -4.5442   TTAAGTGTTGAACCC               CGCGG CAAAA CCGCG               TTTTCTCATTCAAGA  87 146
 SCL_RS00550 NONE
 SCL_RS00555  124667 ..  124725 + -10.6  -2.57344   GAAAGGATAGTTTCA GGTCTCAGGTTTCAAGTTTCAGGT GCGAACCTGAG ACCTGAAACCTGAAACTTGAAATC GTTATCGAGGCCATA  66 31
 SCL_RS00560  125179 ..  125198 +  -2.1  -2.59475   AACCGCAGATAAACG            GTCGC TCCTGCGCTC GCGAC             ATTCGTATATCCCTG  38 29
 SCL_RS00565  127459 ..  127469 +  -2.4  -4.19506   TCCGTCCCAGTCGAG                 CCCC AAA GCGG                 TTTTGCCGTTCGAGT  59 104
 SCL_RS00575 NONE
        ubiA NONE
 SCL_RS00585 NONE
 SCL_RS00590 NONE
 SCL_RS00595  132370 ..  132394 +  -5.8  -5.37345   TCCGGGCGCGTCAGT         GCGGC--GATTC ACC GAATCACGCCGC         TTTTTTCTCGTTACG  95 42
 SCL_RS00610  133906 ..  133916 +  -3.2  -3.47322   CATGGAGAATGCTGC                 CGTC CTG GATG                 TTGGTTCTGCTGCCG  49 383
 SCL_RS00625 NONE
 SCL_RS00630 NONE
 SCL_RS00635 NONE
         xth  139322 ..  139346 + -14.3  -3.06162   TCCTCCACCTTGAAC          TCGCCACGCAG TTT CTGGGTGGCGA          TCTTGCCCTCGGGTG  78 150
 SCL_RS00650 NONE
 SCL_RS00655 NONE
 SCL_RS00660  142775 ..  142785 +  -2.4   -3.6471   AAACCGGGTATGGCT                 GGGC GTG GCAC                 TTCTGTGGTTTGGCC  50 166
 SCL_RS00665  143515 ..  143526 +    -3  -3.92522   AATGGGAATTTTGAT                TTGA TAAT TCAA                 TTTCTGGAATTCAGG  56 27
 SCL_RS00670 NONE
 SCL_RS00675  146432 ..  146444 +  -6.9  -3.19175   GACTGCAACGGCGTG                CGCCG CCG CGGTG                TTGGCTGTCTTCAGC  56 164
 SCL_RS00680  147569 ..  147597 + -15.4  -5.83822   GGTTACCGGACAGAG        GGGCGGTGACTT TATTC AAGTCATCGCCC        TTTTTTTTGAATCTG 100 289
        gcvT NONE
        gcvH  149154 ..  149212 +  -8.5  -3.25491   ACTGAATTGAATCGA CAGGA-TTTACAGGATTAACAAGATT ATTTTTTA AATCCTGTGAATCCTGAAAAATCCTG TTAATCCTGTGAATT  62 36
 SCL_RS00695 NONE
 SCL_RS00700  151219 ..  151237 +   -16  -2.97171   CAGGCATTAAATAGT             TCGCGCGC GGA GCGCGCGA             TCCTTTAATGAACTG  87 81
 SCL_RS00705 NONE
 SCL_RS00710 NONE
 SCL_RS00715  153951 ..  153961 +  -4.6  -3.72576   TTGGTCCATTTCAAT                 CCGT TGC GCGG                 TTTCATCAACAGCGC  58 199
 SCL_RS00735  158696 ..  158707 +    -3  -4.20148   TGACCAACAGGATGG                TTCA ACCG TGAA                 TTATTTTCCGCTGAT  58 15
 SCL_RS00740 NONE
 SCL_RS00745 NONE
 SCL_RS00750 NONE
 SCL_RS00755 NONE
 SCL_RS00760 NONE
 SCL_RS00765 NONE
 SCL_RS00770  164944 ..  164957 +  -3.1  -4.56597   GCCGCCATTTCTGGT               GCATCG TTT CG-TGC               TTTTTAAGCAGCCGC  67 48
 SCL_RS00775  165753 ..  165771 + -13.1  -5.18643   GTTTGTTCGTACAAA             CGGCCGG TTATT CCGGCCG             TTTTGTTTTAATTAC 100 55
 SCL_RS00785  169198 ..  169216 +    -8  -4.28045   CTGATTTTACCGCGC             CGGTCGCG CCG CACGGCCG             TTGTTTTCCTGATCT  81 69
 SCL_RS00790  170497 ..  170513 +    -5  -2.63112   CCGTCCGGTTCCCCG              CCCCGG AACAG CCGGCG              TAATCTGCAAAATTT  46 42
 SCL_RS00795 NONE
 SCL_RS00800  171927 ..  171937 +  -5.4  -3.26722   AAGGAGGAGAGCCTC                 TGGT TGG ACCA                 TATTATGAATCTGCA  52 131
 SCL_RS00810  174426 ..  174441 +  -6.1  -2.80935   TAATCACCCGATTCC              TCCCG CCCGAC CGGGA               TCTGATCAGTAAGGT  50 38
 SCL_RS00815  174992 ..  175004 +  -3.3  -3.85698   GGTGGAATAGACCCC                ATGCC CAA GGCAG                TTTCTCCCCCGCCGG  54 31
 SCL_RS00820  176587 ..  176602 +  -7.5  -3.12327   ATAGCCGGAAAACAG              CGGCG TCAGGT CGCCG               TATTCCGTGTGCGCA  56 262
 SCL_RS00835  179500 ..  179519 +  -9.2  -3.56704   GATTGTAAAAATTCT            CGCCCTCG AAAC CGAGGGCC             TTGCTTTCGTACACC  68 387
        plsY  180958 ..  180978 +    -6  -3.41745   GATGCCCCAGCGCGC            CCGCGCGC TAAAC GCGAGTGG            TTCGTGTTGTCCCAC  55 355
 SCL_RS00860 NONE
 SCL_RS00865  182791 ..  182815 +    -3  -4.56775   GCCCGGCTCGGCGCC         G-GCTGAAAAT TCCA ATTTTTAGCTC          TTTTTCAGCAAACCT  67 20
 SCL_RS00870  184694 ..  184712 +  -3.7  -4.37711   CCACTTAAGCTATAC             TCTCGCG TTTTT CGCGGGC             TTTTACGTTTCATCA  66 59
 SCL_RS00875  186642 ..  186674 + -17.1   -3.5944   TGTTCTATCCACACC     CG-CAACGGGCCGG TATAAT CCGGCCCGTTGTCG      TTTGGGCCTGTAGCT 100 49
 SCL_RS00880 NONE
 SCL_RS00885  188203 ..  188218 +  -4.6  -4.09685   GAGCCACATCTTCCA              CGCCTC CTTC GAGACG               TTTTCCCAGATGCGC  63 381
        thiS NONE
 SCL_RS00925 NONE
 SCL_RS00930  193763 ..  193799 + -10.2  -2.89527   GTAGCGCAGGATCAC   CGGCCGCCGGCT-GCG GGTGTAG CGCGAGCCGGTG-CCG   TCGTTGTGCTGTTGC  61 161
 SCL_RS00965  197362 ..  197373 +  -5.8   -3.2794   TCAAGGCGTAGTAGT                CGGA CAAT TCCG                 TTCATATAGATGAGC  54 1
 SCL_RS00970 NONE
 SCL_RS00975  199698 ..  199731 +  -8.1  -4.08394   TTCTGATGCCCAAAA     TAATAAGGGCCGGCG TCCA TGCCAGCCCTGATTG      TTTTGAAACAAGTAT  77 35
 SCL_RS00985  201832 ..  201846 +  -4.9  -3.21099   CAGAACAGCCCCAGA               CGCTC GCGCA GGGCG               TTGCTGCTCAAGCGC  49 136
 SCL_RS01050 NONE
 SCL_RS01055 NONE
 SCL_RS01060  217694 ..  217720 +  -7.2  -2.57132   TAGGAAGATCACGCG         CTCGTGCAGCAC CTT GTTGTGCGCGAG         GTTGTGCAGCAGCGC  51 406
 SCL_RS01085 NONE
 SCL_RS01090  225195 ..  225224 +    -5   -5.0133   TTTTGATTTAATAAT      CT-G-GACCCCGGC TTTC GCCGGGGTGACGAG       TTTTTTAACGACCTG  82 110
 SCL_RS01110  228088 ..  228125 +  -3.4  -3.92963   TGCGGTTCCTGGATA  TGCCGGGCGCATGACGCG CATT CTCGTCA--CGCTCGGAA   TTATTCTGATTGTTG  56 12
 SCL_RS01115  228634 ..  228648 +    -7  -3.53012   AAGCGAGACCGTGTT               CGAGCC CGA GGCGCG               TTTCCCAGCGCCCGG  60 361
 SCL_RS01155  236177 ..  236199 +  -3.2  -3.07043   GGGCAGGCTCTGGGA           CGGGGACGCG AAA TGCGCTACCG           TCTTGGGATGCTGAC  43 45
 SCL_RS01160 NONE
        mobA NONE
 SCL_RS01170  239114 ..  239134 +  -9.7  -3.29461   TCAAGCAGCACTTCG            CGCCTGC TCCATTT GCAGGCG            TTGTCCAGCAGATTG  63 299
 SCL_RS01195  243011 ..  243027 +  -2.2  -4.56775   TGGCCCGCAGTTTTT              CTTCCT TCGCC AGGTAG              TTTTTCAGCCACGGT  68 413
 SCL_RS01215  250590 ..  250615 + -12.5  -2.87881   CAAAGCGCCGCAATT         CCGG-CGGCGCG CCG CCCGCCGGCCGG         TCTGTCAGCAGGTTC  70 499
 SCL_RS01230 NONE
 SCL_RS01235  254955 ..  254990 + -23.4  -4.36554   GGCCGGTTCGCGTAA    GGGA-GGCCGGGCAGGC TGA GCCTGCCCGGCCGTTCC    TTTGTTATGATGGTG 100 70
 SCL_RS01240  255938 ..  255984 +  -7.5  -3.07005   GCCAAGGCGCCAAGG CGCCAAGAAAG-CGGGTTTT AGAAATTG AAAACTTGGCGTTCTTGGCG TCTTGGCGGTTGATT  57 90
 SCL_RS01245 NONE
 SCL_RS01250 NONE
 SCL_RS01255  258647 ..  258705 +  -6.3  -3.56226   AAAAATCTTGAACCA CAGATGAACACAGA-TACACACAGATAAT TAA AGTTTCTG-GTTTAATCCGTGTTCATCTG TGTTTATCCGTGGTT  57 39
 SCL_RS01260  260129 ..  260152 +  -6.6  -3.97331   TAAATCCTTTCTGCC          GAGGCGGG CCGTTACA CCCGCCCC           TTCTTTAAGTCGCTT  68 51
        dsrA NONE
        dsrB  262703 ..  262722 + -16.4  -3.75153   ATTGGAAAAAACCAA            GGGCGGGG GAGA CCCCGCCC             TTTGCGTTGGCGCGC 100 52
 SCL_RS01280  265622 ..  265633 +  -5.8  -4.05788   ATGGACGCTATGCGT                TCGC TTTT GCGA                 TTTAATTTGACACGA  65 9
 SCL_RS01285 NONE
 SCL_RS01290 NONE
 SCL_RS01295  270587 ..  270605 +  -2.5   -4.1851   ACTCTAACCTCCGTA            TATCAGCA TTCA TGC-GATA             TTCTTTGTGGTTTAC  56 205
 SCL_RS01300  272364 ..  272383 +  -3.4  -4.49644   CGCTGAAACCCCTTT            CTCGCGCG GATT CGCGCCAA             TTTTCAATTTTTGAT  64 35
 SCL_RS01305  274271 ..  274298 + -15.6  -3.53012   TAGTATCCGTGGCAA        TATGGGGCGGGA GCCA TCCCGCCCCATC         TTTACGAGAGAGCAG 100 38
 SCL_RS01310 NONE
 SCL_RS01315  276159 ..  276212 +  -5.2  -3.51329   ACCGCGCCGGACGTG GAGCACCTGACCGCGGT-GCTGGACG AAAT CG-CCGGCCGCTGCGGTTACGAGGTC TTGTCCTTCCCGCTG  55 367
 SCL_RS01325 NONE
 SCL_RS01330  277896 ..  277930 +  -8.5  -2.52543   AACATGGGCGCAAAT     AGTTGGGTTTCGGCG CAATA CGCCTCAACCCAACC     TACATTAAGCCGAGT  56 65
        nirJ  279234 ..  279258 +  -6.9  -2.64616   CTTTCTGGTGTATCG          CGAACCCGGGC GAT GCCCGGTCCCG          TCGTGTAGCTGCCAC  51 103
 SCL_RS01345 NONE
 SCL_RS01350  282360 ..  282386 + -10.8  -4.80959   ATGCATCACCGGCCC         TTCCGGCGCCGA CCC TCGGCGCGGAAA         TTTTCTTGTGCATTG 100 120
 SCL_RS01355  283839 ..  283852 +  -3.8  -3.33744   GGCTCCGGGATACCC               GAGC ATGGCG GCTC                ATTTTTCCGGAACCC  49 92
 SCL_RS01360  284323 ..  284354 +  -4.3  -3.14132   CGCCGACCCTCCCCT      TGCGGACGCGGGA GGTATA TCCTGTGGCGGCA       TTGATGGGGGACGGG  47 52
 SCL_RS01365  285454 ..  285473 +  -3.4  -2.82895   GATCGCCGCCGGACA            CGGGACCG GACG CTGTCGCG             ATTCTTCATGAAAGC  41 44
 SCL_RS01370  286736 ..  286749 +  -5.2  -2.70932   ATCCGGTCCCGACCT               GGCC GATCGA GGCC                TGATTCCCGCCCCGC  47 126
 SCL_RS01375  287579 ..  287595 + -10.9  -2.72344   CGTTTCTGCCGGTGC              CGGTGAT GAA ATCACCG              TCGTTCCACGTGCCG  63 308
 SCL_RS01420  294766 ..  294793 +    -4  -3.05816   TAAGCCCTCCCGCCG        CGGCTTCCCATC ATGG GAAGGAAAGCCC         TTGAATGCCGGGTCG  45 38
        cueR  295454 ..  295467 +  -2.3  -3.91911   AATCCCGCTTGAGCA               CTTCC GGAG GGACG                TTTGCTTGAAGTCGG  52 102
 SCL_RS01430 NONE
 SCL_RS01435 NONE
 SCL_RS01440  300722 ..  300736 + -12.8  -3.07816   CTGAGCCGTTTCCCC               GGCGCC GAT GGCGCC               TTCGCTCAATGCAGC  81 37
 SCL_RS01450  303268 ..  303287 +  -8.5  -5.38958   TACTTCGTAAAAAAA            CCCCGGT CGCCAA GCCGGGG             TTTTTGTTTGTACCT 100 52
 SCL_RS01480  308214 ..  308226 +  -6.2  -2.62396   CTGCTGGCCTGACGC                GCCG CCCCC CGGC                TGGTATAACCCGGTA  49 29
 SCL_RS01485  309043 ..  309065 +  -3.3  -3.96148   CGAGGCAGTGCTTAA           TGCGGCAGG ACGAG CATGCGGCA           TTTATAATACGCGGA  56 48
 SCL_RS01490 NONE
 SCL_RS01495  310086 ..  310105 +  -3.6  -3.05844   GGGAGAACGGGCCGG            CGTTTGAT TCAG ATCAAACA             TCTTCCGGTCGGCAC  45 131
 SCL_RS01500  310659 ..  310686 +  -6.9  -3.59402   CCGACTTTTCCGCCA        CCG-CGCCGGGC GGGTG GCCTGGCGGCCG        TTCCTTTGATCTGCA  60 71
 SCL_RS01505 NONE
 SCL_RS01510  312635 ..  312693 +  -4.2  -2.55999   GTTACGAGTGCAGAG TTCAGAGTACAAAGTTCAA--ACCGAAG CCGAA CTCCGTACCTTGAACTTTGTACTTTGAA CTTAATCTGACATGA  44 45
 SCL_RS01515  313985 ..  314022 +  -8.9  -2.75712   ATTTGCCGTCGATTT   CCGGCAGCCGTGCC-GCC AGC GGCTGGCCCCGCAGCAGG   TGGTTGAATACCTGC  54 415
 SCL_RS01525  315705 ..  315719 +  -7.1  -4.21827   CTACGCACCCATAAG               TCCGG GCGAG CCGGA               TTTTCGCCTGTTTCC  70 27
        hemN  317251 ..  317270 + -13.6   -3.1585   TGTTGTCGAAGATGC            CCAAGCCC CTCG GGGCTTGG             TATTACGTTCAATCA  84 61
 SCL_RS01535 NONE
 SCL_RS01540  318462 ..  318491 + -16.4  -2.78384   GCGCGACCCTCGAAA       CCGGGCCCGGTA CAAGCA TTCCGGGCCCGG        TGTAGTGGAAGCCGC  90 50
 SCL_RS01545  319557 ..  319578 +  -4.3  -2.55818   TTTTTGTCGCAGGGT           TGACAAGCC GGCC GGCTTGCCC            TAGCTTGACCTTCTT  44 54
        bioB  320623 ..  320673 +  -9.8  -3.67417   AGGCCCGCATGATTT TCGGGTCGGT-CTGCGTGCCCGAG GCCGG TTCCGGCA-GCAGCACCGCCCTGA TTTCAAATTCCATAT  74 69
 SCL_RS01580 NONE
 SCL_RS01585 NONE
 SCL_RS01590 NONE
 SCL_RS01595  329014 ..  329029 +  -5.4  -5.02476   CAATCTGGTTTATAA              CGCCTGA GCT TC-GGCG              TTTTTTCGCCAATGT  82 19
 SCL_RS01600  331848 ..  331864 +  -3.5   -4.0371   GGCAAAGGCCGCGAC              CAGCGCC ACC GCCGCGG              TTTCTATGCGCAGTA  58 61
 SCL_RS01670  344308 ..  344318 +  -2.4  -3.35073   ATCGGGTGTTAACTG                 CCGG AAG CCAG                 TTCCTTGGCGCTGAT  45 29
 SCL_RS01765 NONE
 SCL_RS01770 NONE
 SCL_RS01775  360014 ..  360035 +  -4.3  -3.54459   CGCCTGGCACGTTTG           CGCGAGATG GCAC CATGACGCG            TTTGCGCCAGCTTGG  52 8
 SCL_RS01780  361688 ..  361707 +  -4.3  -3.34455   GCCGAAATCCATGAT            CAACGGT ATGCCG ACTGTTG             TTGCATTTATGCTAG  51 27
 SCL_RS01785  362664 ..  362719 + -30.2  -2.89323   AACTTTAGCCACAGA GATCACAGAGGGCACAGAGAAAGAAA TTGG TTTTTTACTCTGTGCCCTCTGTGATC TCTGTGGCCAGTTTT 100 49
 SCL_RS01810  367960 ..  367984 +  -2.1  -3.08991   GCTGCGCGAGGCCTT         TTG-CAGCGC GGTCCG GCGCTGACCA          GTTTGTTGAAAACCT  42 4
 SCL_RS01815 NONE
        grxC NONE
        secB NONE
 SCL_RS01830  370436 ..  370452 +  -2.1  -5.92399   AGGCAGCATTAACTC              TGTGCCC TCT GTGCCCA              TTTTTTATTTTGTTA 100 101
 SCL_RS01840  373096 ..  373107 +  -3.6  -5.07567   ACCCTGGTCGATAAC                CGGG AGCG CCTG                 TTTTTTCGACTATAG  77 146
 SCL_RS01845  374908 ..  374923 +    -4  -2.55818   GGTGGTGCGCGCCAC              TTTCTC GATG GAGGAA               TAACTTGCCGTTGTT  42 7
 SCL_RS01850 NONE
 SCL_RS01855 NONE
 SCL_RS01860  377499 ..  377531 +   -12  -5.07567   CGGTGAAACCGCAAA     C-TTGGGGCGCTGGC GAGA GTCAGCGCCCCATTG      TTTTTTCAGGTGTGA 100 179
 SCL_RS01865 NONE
 SCL_RS01870 NONE
 SCL_RS01875  379037 ..  379049 +  -4.1  -2.73875   CACCAACGTCCGGCC                GAGGA ATT TCTTC                TGATGTTGAACGCCC  43 10
 SCL_RS01880 NONE
 SCL_RS01885 NONE
 SCL_RS01890 NONE
 SCL_RS01895  383166 ..  383204 +  -3.7  -2.66216   GCAAGGCTCTCCGTC  GG-GATGCGCGGCGCCAC CCTG GTGGAGCTGATCGTCGCC   ATTATCATCATCGGC  42 46
 SCL_RS01900 NONE
 SCL_RS01905 NONE
 SCL_RS01910 NONE
 SCL_RS01915 NONE
 SCL_RS01920 NONE
 SCL_RS01925  390046 ..  390059 +  -5.9  -3.63515   CCGTCGCTGATTCCT               GCCCT TCCC GGGGC                TTGTTCGGGCTCCGG  60 50
 SCL_RS01930 NONE
 SCL_RS01935 NONE
 SCL_RS01940 NONE
 SCL_RS01945 NONE
 SCL_RS01950 NONE
 SCL_RS01955 NONE
 SCL_RS01960  396976 ..  397031 +  -3.6  -4.81523   AAAAGGCAGTGAAAA GTTAAAAGTGCAAAGTTAAAAG TTAAAAAAACGC CGTTCAACTTTTCACTTTTAAC TTTTCATTTTTCATT  72 29
        bioF NONE
        bioH NONE
        bioC  400705 ..  400725 +  -3.2  -3.14132   CCGCATCGGACGCGG            CCGGCC ATGAGCGGC GGCTGG            TTCGTCAGCGGCACC  43 16
        bioD  401450 ..  401474 +  -2.7  -4.67982   GACAGACGGCATCAC          CCGGTTGTTAA CAT TTTTCATCCGG          TTTTATTCCCTCAAA  67 75
 SCL_RS01990 NONE
        coxB NONE
        ctaD  404980 ..  404997 +  -4.1  -3.23692   CGCCGGCAACGCATT             CGCC-TCA CGG TGGCGGCG             TTGCTGCTGCTGGTC  47 86
 SCL_RS02005 NONE
 SCL_RS02010  406629 ..  406651 + -16.3  -5.60993   GACTCAAATAAAAAA           GGCGCTGCC ATTCC GGCAGCGCC           TTTTTTTATCGGGCA 100 53
 SCL_RS02020 NONE
 SCL_RS02025 NONE
 SCL_RS02030  409333 ..  409346 +  -3.7  -3.10597   CATAAGGCCCGGCCG               CCCCG AACC CGGTG                ATTTTCAGTCCCGAA  45 11
 SCL_RS02035  410288 ..  410303 +    -6  -3.07344   GTCTATATCCACGAG              GCGCTG CAAT CCGCGC               TGTATTAGAACATCC  52 2
 SCL_RS02040  410968 ..  410987 +  -4.2  -3.23733   AATTAATCTTCCTCA            TCCTTGTG CCGG CGCGGGGA             ATTTTCTACCATGGC  49 35
 SCL_RS02045 NONE
 SCL_RS02050  412261 ..  412273 +  -3.4  -4.56597   GCCATTGCCCGTTGC                CTGA TCTCC TCAG                TTTTTAACCGGGCCG  67 22
        corA  415456 ..  415466 +  -8.2  -3.36569   CCTCAATGCTCAGCT                 GGCG GAA CGCC                 TCTTTCAGGCCTTCG  60 484
 SCL_RS02105  424133 ..  424143 +  -2.4  -3.07005   AAAAGCCTTTCTTGG                 CGAC CTT GGCG                 TCTTGGCGGTTAATT  42 109
         hyi  425004 ..  425059 +  -5.8   -3.1709   TGGACAGGATTAACA GGATTTACAGGATTAA-AAAATTTGTG AAA TAAAAATCATGTTAATCCTGTGAATCC TGTCTAATTTTTCTT  54 54
 SCL_RS02115  426053 ..  426063 +  -2.4  -3.06737   AACTGCTTTTCTTGG                 CGAC CTT GGCG                 TCTTGGCGGTTAATC  42 98
 SCL_RS02120  427406 ..  427419 +  -3.7  -3.54129   TTATCGTGATCTGAT               CGGTG TTAT CCCCG                TTTCCGGGCCGTATC  51 49
 SCL_RS02125  427853 ..  427882 +  -6.5   -2.6186   TAAAAAAGCGTTTCA       TTGGGTG-CTCAAG GTT CTTGAGTTGCCCGA       CTTCTCCCGTTACAT  51 73
 SCL_RS02130  429149 ..  429181 + -12.2  -5.24129   GAGCAACAAATGGAA     CAGGGTGAAGA-TTG TCGT CAGGTCTTCACCCTG      TTTTTTGTCCCGGCG 100 64
 SCL_RS02135  429738 ..  429761 + -11.6  -3.13073   TTGATCGGTTACTGA          CGCCGGGGGC GAAG GCCCCTGGCA           TGTGTTACTCAGGAT  72 26
 SCL_RS02140  431384 ..  431442 +  -7.9  -3.19285   AATGGACAGGATTAA CAGGATTTACAGGATTAA-ATAATTT GCGAATAA AAATCTTGTTAATCCTGTGAATCCTG TCTAATTTTCTCTTT  59 57
 SCL_RS02145  432407 ..  432438 +    -8  -2.72344   TGTGACCCCGGCCGC      GGCGGATTTCCT-CC CGT GGCATGAAACCCGCC      TGCTTGAAGATCGCC  57 71
 SCL_RS02150 NONE
 SCL_RS02155  433783 ..  433795 +  -2.6  -4.36914   ACGATGTCGCCACTT                TCCG CGCGC CGGG                TTTTGTGCACAGCCA  62 276
 SCL_RS02170  435858 ..  435870 +  -4.1  -2.81133   TTTACTTGCGGTGTA                TGCAT ATA GTGCA                TATACTGAATCAGTG  43 126
 SCL_RS02175 NONE
 SCL_RS02180  436724 ..  436734 +  -5.4  -4.82901   ACCCCATCGAAATAT                 GTGA GCA TCAC                 TTTTTATGGAGCCGA  76 314
 SCL_RS02185  438339 ..  438365 + -16.6  -3.71284   TTTTTCGAGCCGACG         CCGTGAAACGCC GCA GGCGCTTCACGG         TTCTGTTCGTGCCCG 100 53
 SCL_RS02190  438871 ..  438906 +  -6.2  -3.67864   GTCCTAACCCGTCAT   TCGAGAGAGACGCGCC AAAAGC GGCGCG-CTC-CTCAA    TTTAACGTTAGATTG  60 57
 SCL_RS02195  440487 ..  440503 +  -2.2  -3.36059   TTCCGGGCGGGTAGA             GGCATGG GATT CCG-GCC              TGTATTTCTCGGTTG  45 224
 SCL_RS02200  440744 ..  440764 +  -3.3  -4.15044   TCAGGCGGGCCAGGA            GTGATGA AGCCTGA TCATCGC            TTTATTCAGGACGGC  58 12
 SCL_RS02210  442611 ..  442624 +  -3.7  -3.05935   GAGCGGGATTAGGGC               GCCGG ACCG CCGGA                TTGCATACCAAGTCT  45 29
 SCL_RS02215  443406 ..  443429 +  -3.8  -2.66316   GCGCGTCCGTGATCC          GGGGT-CGAGC GGT GCTCGGAATCC          TCATGTACTGCCGCG  42 61
 SCL_RS02220  443544 ..  443563 +  -5.6  -4.56597   CGCTGACGCCACTGC            GCGG-CGCG TTT CGCGTCCGG            TTTTTCGCCCAGCAG  76 62
 SCL_RS02235  447526 ..  447550 +  -8.5  -3.66666   AAAATGGTGTCTTCG          TCCTCGCCAAC GTT GATGGCGAGCA          TTTCAAAATTTTCGC  65 259
 SCL_RS02250  449773 ..  449824 +  -3.8  -3.66356   GCGCTGAAGGGATGA TGCC-CGC-GGGTCAGGCGCCGA CATGCTAAA TCG-CGACTGACCCGGCAAGGCA TTTACCCTTGGAACT  53 34
 SCL_RS02255 NONE
 SCL_RS02260 NONE
 SCL_RS02265  452389 ..  452416 +  -2.6  -2.54634   AAAAACGCAAGCCGG        CGACCGCATG ACCAAACC CTTGCTGTCG         ATTCGTGATCTGGGC  38 15
 SCL_RS02270  453098 ..  453133 +  -2.4  -4.07568   GACGTGCGCCGCATG    TACCTGGGCGGCGC CTGAGCCT GCGGTGTCCGGGAA     TTTTGCGCCCGGCAG  56 8
 SCL_RS02275  455462 ..  455476 +  -2.1  -3.66844   TTTTTTCGAGAAGGA              CAG-CG CCAT CGTCTG               TTATTACGGTGTGGC  50 313
 SCL_RS02280  457985 ..  457999 +    -7  -3.70902   CCACGATGCGGTATT               CCGTCG TCT CGCCGG               TTTCGCTCTCCAGCC  62 239
 SCL_RS02290  458891 ..  458907 +  -7.9  -2.53715   AGTATGGGCAACAGC              GCCGCGA TGA TCGCGAC              CTTGGTCATGGTCAC  50 194
 SCL_RS02315  465211 ..  465239 + -13.9  -3.39505   ATAAGCGCAGCGCAT        TGCGCCGGATGGA GCT TACATTCGGCGCA        TTATGGCTGTCGCCT  88 53
 SCL_RS02340  471014 ..  471045 +  -4.3  -4.51378   ATTTCTGTTAAATCA      GAGGGGTCCCTGG GCCCTA CCATGCACCCGTC       TTTTCTGATATAAAT  68 43
 SCL_RS02345 NONE
        rpmG  471545 ..  471569 + -20.1  -5.07567   GACCTGCCTTATCAC          CAAAGCCCGGC CCT GCCGGGCTTTG          TTTTTTCCGCTATCC 100 55
 SCL_RS02355  472335 ..  472351 + -13.7   -5.5112   ATCGCCAACAAAAAA              GCCCGCA ACG TGCGGGC              TTTTTTGTTGGTACA 100 56
 SCL_RS02365  474129 ..  474151 +  -6.3  -2.57463   AATCCCTGATGTAGA           CTTCGCGTT GCGGG AACGGGAAG           GTTATGCCCGCGGTT  49 32
 SCL_RS02400 NONE
 SCL_RS02405 NONE
         hda  481871 ..  481884 +  -2.3  -3.04144   GCGCCATGGATAGCC               CGCTG AAAT CAGCC                TGTTAGCGCTACCCG  42 74
 SCL_RS02415  482535 ..  482552 +    -4  -3.78934   AGAATATTCTTCGGC             GGCCTC CCGAGC GCGGCC              TTGTTGTCAGCGACA  56 94
 SCL_RS02425  484199 ..  484214 +  -3.9  -3.53012   CGACCTGGATGTGCA              GCTGG ATCAGG CCGGC               TTTGGAAAGCGACAG  51 413
 SCL_RS02440  487577 ..  487588 +  -4.4  -4.19974   AGACGCCAAGAACGC                CAAG ATTT CTTG                 TTTATTCGAAGTTTT  62 59
 SCL_RS02445  487940 ..  487952 +  -5.5  -3.33261   CTGCGGGTACCAGCG                GGTCT TGT AGGCC                TTGTCCACCTTGAAG  53 46
 SCL_RS02455  491002 ..  491017 +  -3.2  -4.12188   CCGTACTTGCCGGCC              TGTGAC TCGC GTCCCA               TTTTCCAGATGATGA  61 161
 SCL_RS02490  497126 ..  497163 +  -4.7  -4.11692   CGTACAGCGTGTCGG   GCGCGGTG-CTGGAGCTG GCG CGGTCCCAGGCGTCGCGG   TTTTCCAGCTGCGTG  65 487
        rsmI  503867 ..  503881 +  -5.6  -2.87963   GTTACCACTGGCGCA               CGCTGG AAA TCGGCG               TATCGTGATTCTGCG  49 106
 SCL_RS02535  504487 ..  504506 +  -2.8  -2.66962   GACCTCAGTCATTAC            CGGGCA ACGACCCA TGTCCG             CCTTTTTCGTGATCG  40 140
 SCL_RS02540 NONE
 SCL_RS02545  506072 ..  506093 + -10.1  -5.06414   ACCGGGATGGAACCA           GGGGAGCCA GTCG TTGCTCCCC            TTTTTATTGCCCAAA 100 342
 SCL_RS02550  507389 ..  507404 +  -4.6  -2.50789   ACGCCAGCTTGCGTC              AGCGAG AATC CTCGCC               CCTTGTTTTCTGACT  43 40
 SCL_RS02555  508631 ..  508645 +  -3.4  -3.29471   AATATTGTGAATTGC               GATCGG GTC CCGGGC               TTAGTATCGTAACCG  45 212
 SCL_RS02560 NONE
 SCL_RS02565 NONE
 SCL_RS02570  513427 ..  513440 +  -3.8  -5.00884   CGACGGGGTCCGGGG               CAGG AAATCC CCTG                TTTTTTGCGACAAGT  77 103
 SCL_RS02575  513847 ..  513876 + -19.5   -3.2794   GGTAAAGGCCTGAAA       CAAAAAACCCCGC CATG GCGGGGTTTTTTG        TTGGTGTAGCTGAAA 100 50
 SCL_RS02595  518228 ..  518243 + -11.8  -2.55351   TGCTGGAAAATGTCT              GGCCGC ATTT GCGGCC               CTTGCTCTGACAAAA  72 0
 SCL_RS02600 NONE
 SCL_RS02605  520125 ..  520165 + -21.5  -3.01791   GAATATCCTTGAATC  ACAAAATAAAAAACCCGGC TAT GCCGGGTTTTTTATTTTGG  TCTTCCCGCCAGCAT 100 44
 SCL_RS02610  522626 ..  522673 + -11.9  -4.34263   CTCGCTCGCCGCTTT GGCCGT--GGCAGCGGCCGCCGC GGCC GCGGCGGCTTCAGCCTGACGGCG TTTCTGTTCTTCGGC  91 247
 SCL_RS02635  527701 ..  527716 +  -4.6  -3.15236   TTGCTGGAAATGCGG              CGCTGC ACTG GCAGCA               TTACCTATGCCTTTG  47 169
 SCL_RS02645  528545 ..  528568 +  -8.1  -4.09864   ATCCATTGGATTCAA          TCTCGGGCC GGCGCA GGCCTGAGG           TTTTCGGAAATGAAT  77 4
        rnpB  529062 ..  529073 +  -3.6  -3.76402   TTGGGTCGCAAAAGC                GCGC CGCG GTGC                 TTTCGTCCCTAAAAT  53 119
 SCL_RS02655 NONE
 SCL_RS02660 NONE
        ftsL NONE
 SCL_RS02670 NONE
 SCL_RS02675  534153 ..  534170 +    -4  -2.57344   ATTACTGGGGGAAGC             CGCGTG ATGTCG CTCGCG              ATTCTCGCCGACGTA  42 19
 SCL_RS02680 NONE
 SCL_RS02685 NONE
 SCL_RS02690 NONE
        ftsW NONE
        murG NONE
 SCL_RS02705 NONE
 SCL_RS02710 NONE
 SCL_RS02715 NONE
 SCL_RS02720 NONE
        ftsA NONE
 SCL_RS02730  546752 ..  546786 +  -8.5  -3.85698   TCTGGCGCCCTTGAG    CCACCGGTAA-GCGGC ATTC GCCGCGTTGCCGGCCG     TTTATCGGCCCCGGC  71 100
 SCL_RS02735 NONE
 SCL_RS02740  548961 ..  548990 +  -4.3  -4.30576   CATAATTGCCGCTCT       TTTGTTACGTCTCC CCG GGAGACGC-ACGGA       TTTTCATGATCACGA  66 82
 SCL_RS02745  551713 ..  551770 + -10.8  -4.00124   GACGTGAGCCGTGAT TCGTCATTCGTGAGTCGTGGGATAGAA TCAGT TACGATTC-ACGACTCACGGATCACGA TTTAGTTCTGAAATG  83 34
 SCL_RS02750  553499 ..  553514 +  -8.2  -2.57132   GAATCGTTTCGAGAA              GCCGGC GCTC GTCGGC               ATTGTCAAAGACACG  53 521
 SCL_RS02775  558542 ..  558563 + -13.7  -4.15577   GAAATGAATGAACGG           CGGGGTTGG TACT CCAGCCCCG            TTGTTTCATTATTGC 100 47
 SCL_RS02780  559989 ..  559999 +  -2.4  -3.68529   GTCGTTGTTGCGCCA                 AGCC TAC GGCA                 TTTAAATAATGAGGT  50 10
 SCL_RS02785  560682 ..  560715 + -11.7  -2.89971   CATCGCGCCCTGACA     TGCGCGCGGCGTGATG TCT CGT-GCGCGGCGCGCA     TCTGCTGTATACTGC  75 63
 SCL_RS02790  561314 ..  561326 +  -2.7  -3.61268   ACCCGGTAACGCCGA                TGAAC TTC GTTTA                TTTCAGGATTGCCTG  49 32
        parE NONE
 SCL_RS02800 NONE
        parC  565998 ..  566025 + -18.6   -4.2803   AAGTAAAGGAGTAAA        CATAAACGCCGC GAAA GCGGCGTTTATG         TTTTGGGTTCGGGTA 100 27
 SCL_RS02810 NONE
 SCL_RS02815  569239 ..  569273 +  -2.6  -2.80994   TCCACACACTGAACA     ACGGAGGCAGGCATGT TCG ACATCCCCACCGCCGA     TATCCTGAGCTTGGC  39 51
 SCL_RS02820  569905 ..  569937 +  -4.2  -4.42238   ACCATGAAAATGCTG     CTGCCCGGCGGCAT CGACTGA ATG-CGCCGG-CGG     TTTTAGTTCCACTCC  68 5
 SCL_RS02825 NONE
 SCL_RS02830  571943 ..  571954 +  -7.2  -2.73771   GCCGCGGGATCTTCA                CGGC TTCC GCCG                 GTTTCCGGGCTCTGG  55 46
 SCL_RS02835 NONE
        trpB NONE
 SCL_RS02845 NONE
 SCL_RS02850 NONE
 SCL_RS02855 NONE
 SCL_RS02860  577442 ..  577453 +  -3.6  -3.14211   CGGCGTGACCGGTGT                GGTG CAGT CGCC                 TTCGTGAGCGCGCAT  45 7
 SCL_RS02865 NONE
 SCL_RS02870  579649 ..  579679 + -17.8  -5.07275   GTAACCCGCCGAACA       TATAAAAGCCGCCT CAT GGGCGGCTTTTATA       TTTTTATATCTCTCC 100 153
 SCL_RS02875  580656 ..  580666 +  -5.4  -3.57144   CACTTCCTCCACGAC                 TGGA TGG TCCA                 TTTCGCGGTCCAGCA  55 329
 SCL_RS02895 NONE
 SCL_RS02900  585627 ..  585651 + -12.2  -3.03243   CTGACTGATAAATAA          GGCTGTAACC CGTAA GGTTGCAGCC          TGTTACCGCATAGGT  76 80
 SCL_RS02905 NONE
        higA  586361 ..  586417 + -14.4  -3.53091   TGCGCTTTACCCTGA CGGCGGGGCTC-AGCGTTCCGGC-CGCC AAG GGCGTGCAGGAATAATCGAGCCCGGCCG TTTCAAGCAACGCCT  95 128
 SCL_RS02915  587476 ..  587498 +  -8.5  -3.48807   TCTGCTAGAGCTAAT          GGC-AAGTGC TAGC GCACTTTGCC           TTGTGAATTTGCTCC  65 491
 SCL_RS02950  593758 ..  593775 +  -2.6  -3.20028   CGCGTTCTCAGCAAT             TCCGCC GCCAAG GGCGCA              TGATTTTCTGGTCAA  43 42
 SCL_RS02955 NONE
 SCL_RS02960 NONE
 SCL_RS02965  596481 ..  596503 +  -6.8  -3.28712   CCGCCAGCGAACCGG           CGGGGCGCAC CTC GGGCGTCACG           TTGTAACCCAGGAGC  55 101
 SCL_RS02975  599499 ..  599529 +  -7.7  -2.52464   TCGCGGGAATGACGA      CAGGAGTGGGCGCGT ACC ATGCGCC-A-TCCTG      TCGGTTGACGCGCAC  53 90
 SCL_RS02980  600880 ..  600896 +  -7.9  -3.20573   CCCGCATCAAGTGTG              CACGCAG CTC CGGCGTG              TCTTCATGTCCGTGG  56 91
 SCL_RS03010  605618 ..  605628 +  -2.4  -3.24146   AAGATAAGGCCATAG                 CGCC GTT GCCG                 GTTTTCCTTGAGCCA  43 314
 SCL_RS03020  607887 ..  607906 + -13.6  -5.35815   TGATAAAAAACAAAA            GGGCTTCC TCGC GGAAGCCC             TTTTTATTTGCTATG 100 58
 SCL_RS03045  612939 ..  612955 +  -3.7  -3.06831   GCGTCCCGCCCCGCG              CATGG GAGGCAG CCATG              TTCGATAGAAATTGG  45 1
 SCL_RS03050 NONE
        rsmD NONE
 SCL_RS03060 NONE
 SCL_RS03065  615858 ..  615874 + -10.8  -5.49568   TTGTTTTTCGAAAAG              GGCGGC CATGA GCCGCC              TTTTTATTTTGGGTT 100 50
         ggt  618616 ..  618633 +  -6.9  -2.50994   CTTGATGATCTCGTA             ACCCACC TGCG GGTGGGC              CTTGATCAGATTGAA  48 342
 SCL_RS03110  629020 ..  629047 + -11.2  -4.57073   CCGCAAACCGATTCA        CCCCATGCCCGC GTCA GCGGGCATTGTG         TTTTTGGGCGGCATC  95 57
 SCL_RS03115  630162 ..  630182 +  -8.2  -4.07568   GAGTTTGCTCACTTG            CCGGCTCC GTAAG GGAGCCGC            TTTTCCGGGAGAAAA  77 14
 SCL_RS03120 NONE
 SCL_RS03125  631300 ..  631327 +  -7.6  -4.02108   CCGTTCTCGACGGCG        GCGCGCAGCGCCG ACT CGGC-CTGCGCCA        TTTCGTTCTGCTGAA  71 487
        argH NONE
 SCL_RS03170 NONE
 SCL_RS03175  642015 ..  642046 +  -8.8  -3.29096   GGCGGCAGGCTGTCC      CAGC-GTTCCTGAAA AGG TTTCAGGGTCTGCTG      TTCCTCCTTGCTGAG  60 418
 SCL_RS03200  643942 ..  643964 +  -5.4  -3.03159   GGATGAAGCGCCCGT           GGGCGGGACT GGC GGCTTCGCCC           TGTTGCCAGGCTTCG  47 317
 SCL_RS03210 NONE
 SCL_RS03215 NONE
         lon  648873 ..  648883 +  -5.4  -3.25191   AGCAGGGGAGAGCGA                 TTCC GTG GGAA                 GTTTTGTCGGCTTCA  52 39
 SCL_RS03225  649158 ..  649211 + -20.5  -3.53012   AAGCTGGGAATAAGC GCGTGAATCGTGAGTCGTGAGTCGT AAAT GCGGTTCACGACTCACGGTTTACGG TTTACGAACCAAGCG 100 28
 SCL_RS03235 NONE
        lysA  652269 ..  652279 +    -4  -4.07124   ATCGCAGAGTTTTGT                 TGAA TTC TTCA                 TTTCTCTGCGTACTC  58 64
 SCL_RS03245 NONE
 SCL_RS03250  653413 ..  653436 +  -2.2  -4.41348   CTGTTCGGACCGGTG          CCGCATCCGT GAAC ACGCCCGCGG           TTTATTTGCCACACG  62 14
 SCL_RS03255 NONE
 SCL_RS03260  654994 ..  655007 +  -8.1  -2.56596   TGACGCACAGTCTCT               CCCGT CACC ACGGG                TAAATTCATCGCGCG  56 9
 SCL_RS03265 NONE
 SCL_RS03270  656782 ..  656804 +    -2  -3.29043   GCCGTGATCCGGCGT           TCCACCTA GGCCCAG TAGGTGAA           TTCTCCCCGCCGCTT  43 17
 SCL_RS03275  657531 ..  657545 +    -7  -2.53015   TTTTTAACCGGAGGT               CCGGCC CAT GGCCGA               TGCATTCAAGAATAT  51 48
 SCL_RS03280  658323 ..  658335 +  -2.6  -4.65895   CGGGCGGATAGCCCC                CGGG AAATA TCCG                TTTTTCAATCCAGGC  68 439
 SCL_RS03290  660856 ..  660879 +  -6.7  -3.51232   TCAGAATACCAAGGG          GGCAATCTG CAGGCA CAGCTTGCC           TTAGTTTCAACAGCA  60 245
 SCL_RS03295  661867 ..  661909 + -19.4  -2.87132   GGATGCATGACATGA TGCAAACAAAAACCCCGCCA ATA TGGCGGGGTTTTTGTTTTGA TCTCTCAACCGGCCG 100 40
 SCL_RS03305  662875 ..  662895 + -15.4  -3.67296   TCGGTTGTATAAAAA            GCGGGCGC CTGGA GCGCCCGC            TTTCCATCCCTGATC  95 46
 SCL_RS03315 NONE
 SCL_RS03320  667501 ..  667520 +  -5.7  -5.00616   GTGACAGTCACGCAA            CC-ACCGG GGTGG CCGGTCGG            TTTTTTCAGGAGAGG  84 122
 SCL_RS03325  668279 ..  668308 +  -2.2  -4.84359   TCGGGCGGAAAGTGT      TCGCGCGGGGCC-TC GAA GATGGCCTC-CG-GA      TTTTTCTCGCCATAG  74 412
 SCL_RS03335 NONE
 SCL_RS03340  671306 ..  671324 + -12.4  -4.08692   ACCCAGTCAATCCAC             CCGGCTGG TGA CCAGCTGG             TTTTCCGGGAAATTG  91 223
 SCL_RS03365  676283 ..  676306 +  -5.2  -4.65305   ACGCGCATCGGCTGG          CTTCCG-CCGT CTG ACGGGCGGGCG          TTGTTTCTTTTTTTG  73 12
 SCL_RS03370  677386 ..  677401 +    -4   -3.5393   CGGATGCCCCGGGCG              CGCATCA TCT TGA-GCG              TTTCCAGCAGATCGT  53 195
 SCL_RS03380  678989 ..  679010 +  -5.8  -2.78463   TACATCTTTTTCAGC           GCGGCATG CGCCGA CATGCCGG            TGTGATAGGCGCGGT  46 377
 SCL_RS03390  680386 ..  680397 +  -2.2  -3.01726   TGGCGGTTAAGCGGA                GCGA TATG TTGC                 GTTTATGTACCGCGG  42 75
 SCL_RS03395  680855 ..  680871 +  -4.3  -4.58395   AGGTACTCGGAGATA              TGCACCC AAG GCGTGCG              TTTTTCCGAGATGAC  72 172
 SCL_RS03405  683163 ..  683186 + -18.2   -5.0925   ATTGGTGAACCGGAA          CCCGCTGCGT GAAA ACGCAGCGGG           TTTTTCGTTTTCAGG 100 50
 SCL_RS03410  684331 ..  684351 +  -3.9  -3.54183   CGAAACCAGCAAATC            CGTTGGGTT ATC AAGCCGGCG            ATTTTTATGCTCGCG  51 91
 SCL_RS03415  685047 ..  685068 +  -2.3  -3.21772   TTGATAAAAAAATTA           TCTGATAACC GAT GGATATC-GA           TCTTCTCAGGACCTT  43 136
 SCL_RS03420  685922 ..  685937 +  -6.8  -3.54424   ACGGCGGCGACCCAC              GCGGCCG AGC CGG-CGC              TTTAAGCCGGTCGCC  60 5
 SCL_RS03425 NONE
        hslU  687881 ..  687892 +  -7.2  -4.44277   TATATCCTCTGACGG                CCGC CCCG GCGG                 TTTTCGATTTTCCTG  79 29
 SCL_RS03435  688553 ..  688576 + -16.8  -5.36314   GGATTCCCGGAACCA          GAAAGGCCGC GCAA GCGGCCTTTC           TTTTTTGGTCTTTTG 100 58
        argB NONE
 SCL_RS03445  690372 ..  690395 +  -3.8  -4.93877   AAAGCAATAATTGCG          GT-TCTCGCAC CGC GGGCGAGGTAC          TTTTCTTTGCTCGCG  75 106
 SCL_RS03490 NONE
        lolB NONE
 SCL_RS03500 NONE
 SCL_RS03505  702075 ..  702092 +  -4.1  -2.71144   GTGGACCATCCGACT             CACAGGG GAGA TCTTGTG              TCCTTGGACAACATG  43 96
 SCL_RS03510  703049 ..  703072 + -10.2  -5.24129   GGAATAACGATTTCG          GGCGTTGGGC TTTG GCCCGGTGCC           TTTTTTGTACCCCGA 100 34
 SCL_RS03515  703912 ..  703940 +  -8.8  -2.59927   GTAATCCGATCTCAC       G-GAGTCGCGCGC AAGC GCGCCCGGCTCGC        TCCCTTCTCCGCCTT  59 37
 SCL_RS03520  704614 ..  704648 +   -15  -3.61398   CGGGGGAGAGGGCAG     GGTGAGGGGGTGCTAA GGT TTTGCACCCTCTCCCC     TTGTTCCCGCCGGGG  95 64
 SCL_RS03525 NONE
 SCL_RS03530  706469 ..  706492 + -19.6  -5.46629   GACGGTCCTCCGGAA          TGCGGGCGGC GTGA GCCGCCCGCA           TTTTTTTACGCTCTT 100 458
 SCL_RS03535  707911 ..  707929 +   -11  -4.17132   GCTGCTTGCAGAGCC             TCAGGCGC GCC GCGCTTGA             TTTATTACCCGCTTT  88 7
 SCL_RS03540 NONE
 SCL_RS03545 NONE
 SCL_RS03550 NONE
 SCL_RS03555  711822 ..  711847 +  -6.8  -4.13014   TTCGTAAACGTCCGG         CCGG-CAGGCA CTGAT TGCCCGCCCGG         TTTTGCCACTATCCG  70 12
 SCL_RS03560  714736 ..  714750 +  -6.4  -4.58283   AGTTTGCCCCGCTTC               TGGTGG GTT CCATCA               TTTTTCCAGGGATTG  75 185
 SCL_RS03565  715697 ..  715708 +  -2.2  -4.56597   CGCCGAGTACCGCAG                C-CCC ACC GGGAG                TTTTTAAGCGAGCCC  65 437
 SCL_RS03570 NONE
 SCL_RS03575 NONE
 SCL_RS03580 NONE
 SCL_RS03585  721566 ..  721576 +  -5.4  -3.86307   GGGATTTCAGGTCAA                 CTTG ATT CAAG                 ATTTTTTCTTGCCGG  61 43
 SCL_RS03590 NONE
        rsfS NONE
 SCL_RS03600  723189 ..  723229 +  -2.5  -3.60098   GTGGAGTATCATTAG C-CAGCACCCGT-ACCACC GGTAA GGAGGTAACGGGTTCAGCG TTTAGAGTACAAAGT  47 4
 SCL_RS03605 NONE
 SCL_RS03610  725345 ..  725385 +    -6  -3.72576   ACAGTACGATGTCGT GCTGATGTGATGCCGGCCG TTCC CGGCCGGCG-CGCAAGAAC  TTTCGTGAAAACGCG  60 16
 SCL_RS03615  729445 ..  729456 +  -7.2  -3.66874   TTTACATTTTGCACC                CCGG GTTT CCGG                 TTTCCCTGACGTTCA  65 63
 SCL_RS03620 NONE
 SCL_RS03625 NONE
 SCL_RS03630  733220 ..  733230 +  -5.4  -3.17206   GTCTGTTATGTCGAA                 CTGT AGA ACAG                 TGTTGCTGGCTATTG  52 100
 SCL_RS03635  734022 ..  734034 +  -4.7  -4.65895   CCCTAGTTTAGAGGT                CTGGC AGT GCCTG                TTTTTGAGTAGAAGA  71 35
 SCL_RS03645  736820 ..  736835 +  -5.4  -3.24747   GCAGTAACGGAAAAA              CCG-GGT CAG ACCACGG              TTCCTAATCTGGAAG  52 34
 SCL_RS03650  739095 ..  739105 +  -4.6  -3.72695   CCAGGCGCCGTGTTC                 CTGC GTG GCGG                 TTTCCTGCAGCACGT  58 433
        amrB NONE
 SCL_RS03690 NONE
 SCL_RS03695 NONE
 SCL_RS03700 NONE
 SCL_RS03705  749571 ..  749628 + -26.9  -2.99717   CAACCATGGCGAAGC CCGGCAAAAGAAGAGAGGGGCGCGCCG GAAC CGGCGCGCCCCTCTCAGCGTGAGCCGG TCTACTTCTGTGCCT 100 57
 SCL_RS03725  752299 ..  752336 +  -2.5  -4.53475   TCAGGACATCGCCAT   CCTGCTCCTCCAGCGACA GGA TG-CGCCGCAGGGGATGG   TTCTTTTTCTCGCGT  68 233
 SCL_RS03735  753110 ..  753166 + -12.9  -3.05384   CCGAGTATGTCGAAA ACTC-CGTTGCCTCGCCAGGGACGGC TGACAT GCCGTCCCTGGCGTCGCGACTAGGGC TTCGATAGGCCCGGC  81 134
 SCL_RS03745 NONE
 SCL_RS03750 NONE
 SCL_RS03755  757421 ..  757448 +  -5.4  -2.88236   ATCAATTTATTTCTC        CGTCATGCCGGC GGAA GCCGGCATCCAG         TATCATATGACTTTA  49 62
 SCL_RS03760  761677 ..  761692 + -11.8  -4.96646   TTTGAATAAACAAAA              GCCGCC GCAA GGCGGC               TTTTTCATTATGTCC 100 169
 SCL_RS03765 NONE
 SCL_RS03770  763001 ..  763014 +  -4.5  -2.67803   AAATAAACAGGTTCA               GATGG AACC CCGTC                TCAGTTTCGTAACCC  44 35
 SCL_RS03775 NONE
 SCL_RS03780  764038 ..  764048 +  -5.4  -2.71011   TGTTAAGGTCAACAT                 TCCT GCA AGGA                 TAATTCCGGAGACAT  47 59
         gnd  764994 ..  765052 + -15.1  -2.70815   AATAGACAGGATTAA CAGGATTTACAGGATTAA-AAAATCTTG TGAA CAAAATCTTGTTAATCCTGTGAATCCTG TCCATTCATTTTTTT  83 36
 SCL_RS03790 NONE
         pgl NONE
 SCL_RS03800  767679 ..  767693 + -12.8  -2.86689   AGTAGACCACTGTGC               GGCCGC GCT GCGGCC               ATTTCCTGACGTTTT  79 36
 SCL_RS03805  768497 ..  768517 +  -6.8  -2.70932   CGCTACACCACACTC            GCCGCC AATCCGCCC GGCGGC            TGATTGCCAAGCCGC  52 2
 SCL_RS03810  769319 ..  769346 +  -8.4  -4.56597   CTTCCAGCAGCGCCG        CGGACTCGTCACC CGG GGCGGCGA-TCCG        TTTTTCCGCGCCGGC  87 445
 SCL_RS03835  775603 ..  775631 + -12.5  -4.07568   TCGGCGGGTTTTTCA       GCAGCGTG-CGC GCGATG GCGACACGCTGC        TTTTCGCCGCCGGAG  86 335
 SCL_RS03845  778416 ..  778437 +  -2.9  -4.07568   CCGCAACCGCCGCTG           CCTTCCAGT ACCA GCTTGAGGG            TTTTCAGCAGCGGGA  58 168
        cysC  787505 ..  787525 +  -7.5  -2.70932   AAGTAATTAACGCCC            GCCGTGC GGGTTGA GCGCGGC            TAGTTCGCGACGCGA  55 35
 SCL_RS03905  793937 ..  793948 +  -2.2  -4.56597   CGCCGAGTACCGCAG                C-CCC ACC GGGAG                TTTTTAAGCAAGCCC  65 417
        aceE NONE
        aceF  800297 ..  800314 +  -6.3  -2.66435   CGGCCACCGCGCGGT             GGCGATGG ATG CCAT-GCC             TAATATGATGGAAGT  49 47
        lpdA NONE
 SCL_RS03930 NONE
 SCL_RS03935 NONE
        gloA NONE
 SCL_RS03945  804451 ..  804464 +  -9.5  -3.12446   CCCTTCCGCCTGAGC               GGCGC TGCG GCGCC                TTGCGTCGGTTTCTC  67 28
 SCL_RS03950  805330 ..  805347 +  -3.3  -3.13403   TCCCTTGGGGGAGGG             GCGCGTG GGGC CATGAGC              TATTCATGAGCCAGC  43 70
 SCL_RS03955  806038 ..  806074 +  -8.5  -3.25823   GTGCGCAAAAGCGAA    GCGTTGCGCAGCGAACG GCC TGTACGGTGCGCTTCGC    TTACTCTCAGCACAC  62 84
 SCL_RS03990  811368 ..  811393 + -11.1  -3.29144   TGACGGCGCCGCGCA         GGTCGCCGGTT TTGT AGCCGGTGGCC          TTGTCGCCCGGATAC  69 279
 SCL_RS04005 NONE
 SCL_RS04010  816011 ..  816029 + -10.2  -3.14132   GCTGTATCACTTGTA             GGGCGCGT ATC ACGCGCCA             TTCCTCAAGCCCGCA  69 42
 SCL_RS04015  817154 ..  817171 +  -2.7  -5.09173   TTTATGGGCATAGTG             CATTTGT TCGG ACAATTG              TTTTTTGGAATCTTC  76 186
 SCL_RS04025  818880 ..  818903 +  -2.4  -2.62192   CGGGTCCAATTGAGT          GGTTTACTGA CGTA TCATTCAACC           GTTGGTTCCGTCCGC  38 28
 SCL_RS04030 NONE
 SCL_RS04035 NONE
 SCL_RS04040  820641 ..  820658 +  -2.7   -4.2461   AGTTGTGTGCAGTTT             GATAATG TTCG CATCATC              TTTATTGCTGACGAT  62 302
 SCL_RS04045  821202 ..  821236 + -14.4  -4.14739   AAGAGTGAGAGGGGA     GGGGTGGAGCAATTAA TAA TAAATTTCTCCACCCC     TTTTGCAGTCGGTGG 100 49
 SCL_RS04050  821790 ..  821831 + -16.7  -3.04263   AAGTGATGGAGTTCG AGGGACAGACTCCGGTTTT TCTT AAAACCGTGGTCTGTCCCG  TATTGAGAATCAGCT 100 35
         ggt  825876 ..  825921 +  -9.7  -3.24232   TGGTCCATCAGCACC TCGTCCACCTCGCGTGGCGAAA TCT TCTCGCCGC-CGCGGTTGATGA TCTCTTTCAGCCGGC  61 390
 SCL_RS04100  833318 ..  833331 +  -8.1  -3.07816   TTTGAGCTTCAGCGT               GCGAC GTGA GTCGC                TTGGGTAGCTAGCCC  60 139
        ltrA  835994 ..  836007 +  -9.5  -5.45652   GAGTATCCCGCTCTA               GCCGC ATTC GCGGC                TTTTTTGTTGCCCGT 100 202
 SCL_RS04110  837231 ..  837243 +  -2.6  -2.87051   AGACCTCAAGAAGGA                CCTG ATGCG CGGG                CTTTCATGATGCGAA  40 4
 SCL_RS04115 NONE
 SCL_RS04120 NONE
 SCL_RS04125 NONE
        mmsA NONE
 SCL_RS04135 NONE
 SCL_RS04140  843569 ..  843614 +  -2.6  -5.30575   TCGAGGAATTGAGAA TG-AAGTGAGAGGCGGTTGCC CGCAT GGAATCAGCTTTTCACTTTCA TTTTTTCGCTTTTTA  81 18
 SCL_RS04155 NONE
 SCL_RS04160  847925 ..  847954 +  -9.3  -5.33026   CGGCAAACGCCAAGG      CCCGCG--CGCCC GGTTTG GGGCGGACGCGGG       TTTTTATTTCCCTTG 100 109
 SCL_RS04165 NONE
 SCL_RS04170  850236 ..  850257 +  -8.7  -2.74755   AAACGTCATTTTGGA           ACGCAGATG CATT CATCTGCGG            ATATTTAATCTTTAG  60 42
 SCL_RS04175  851318 ..  851351 + -10.5  -5.83211   CGAAACGCAGATCAA     CGCAGACAGTGTTT GAATCCG AAAC-CTGTCTGCG     TTTTTTCTTTTCATC 100 46
 SCL_RS04180 NONE
        pssA  852912 ..  852935 +  -5.8  -3.17238   CCCGGTCCCGCCGCC          GCGCGGTGGC ATCG GCCCGTGCGC           TTGCCTCTCTGCTGT  54 102
 SCL_RS04190 NONE
 SCL_RS04195 NONE
        rimI  856004 ..  856029 +  -6.8  -3.79906   TGGTCGGATGCTCCA         CCGGCATTTC CAGATA GGCATGCCGG          TTGTTCTCCGACTCG  62 102
 SCL_RS04220  858850 ..  858891 +  -6.6  -3.34398   AATTCGGGAAGCAAC CGCCAGTCGTAT-AACGCTG ATGT CGGCGTTCGTCCGGC-GGCG TATTTCAGGCGCCAC  58 429
 SCL_RS04235  862067 ..  862089 + -11.2  -3.53012   TGAACAGGCGCTCGT           CAGCGTCGTC CAG GCCGGCGCTG           TTTGCCGGCACGGCC  71 501
 SCL_RS04250  863540 ..  863565 +  -6.1  -3.65812   GCCTGCGCGCCCTGT         GGCGCGGTGG TTGACGC CCGCCG-GCC         TTATATTGGGGGAAG  60 12
 SCL_RS04255  863976 ..  863999 + -16.8  -5.28481   ACAAGTGTCTGTCTG          GAAACCCCGC TACG GCGGGGTTTC           TTTTTTGATTGAATC 100 48
 SCL_RS04260  865769 ..  865782 +  -5.3  -2.64274   TCCTTCGGCCGAAGT               CATCA TGAA TGATG                TGCGTTTACAGCCCT  46 48
 SCL_RS04265 NONE
 SCL_RS04270  867032 ..  867051 +  -5.6  -5.72254   TATTGCAACCCGCTG            GGCAGCGT GACC ACGCCGTC             TTTTTTCTTGTTTGC 100 394
        lptF NONE
        lptG NONE
 SCL_RS04315  877606 ..  877627 + -10.1  -4.63218   ACTGTCCGTGGAAAC           GGGGCT-GGC TCA GCCTGGCCCC           TTTTATTCCCCGCCG  91 72
 SCL_RS04330 NONE
 SCL_RS04335 NONE
 SCL_RS04340  883954 ..  883966 +  -4.8   -3.0806   AAAAAATAACGCTCG                TCGG TTAGC CCGA                TGTTACGGCTTTACA  47 32
 SCL_RS04345  884743 ..  884755 +  -5.5  -2.83346   ACCGAATTCCGCTTC                GAGCG TGA CGTTC                TCCTTCCATTTGTAA  48 124
 SCL_RS04375  894286 ..  894315 +  -9.3   -3.5511   ACTTCCGGCGTGATC       GGGC-CGATCTGCT TGT AGCGGATCACGCCC       TGTTTGTCGATGACG  68 109
 SCL_RS04425 NONE
 SCL_RS04430 NONE
 SCL_RS04470  911264 ..  911274 +  -5.4  -4.57569   TGCCCTCGGCCAGGT                 CATC GCC GATG                 TTTTTCCCCAGGTCG  74 408
        rplU NONE
 SCL_RS04490  912724 ..  912747 + -13.8  -5.98675   GCGCGTACCGAAAAA          CCCCGCCCTG GCAA CACGGCGGGG           TTTTTTATTTTTATG 100 50
        obgE NONE
 SCL_RS04500  915101 ..  915117 + -15.1  -5.55769   GACACCCAAAAAAAA              GGCCGGC AAC GCCGGCC              TTTTTTATTATGAAG 100 44
        mviN NONE
 SCL_RS04515  917598 ..  917616 +  -4.4  -3.04715   TTGTTCTCGCGTGCG             CGAGACGG TAA CCTTCCCG             GTTTTCCCGGACATA  47 60
 SCL_RS04520 NONE
 SCL_RS04525 NONE
 SCL_RS04530 NONE
 SCL_RS04535  922324 ..  922347 + -10.3   -5.0133   GCTGTTTCGTGCCCA          G-ACGCCCGG CATCC CCGGGCGTTC          TTTTTTCCGACACTA 100 45
 SCL_RS04540  923882 ..  923918 +  -2.2  -3.51034   AGCGGCCTGGGTTAG   CGCGATCTGCGCATCGG AGCG CCGG-GTTTGGATCGTG    TATTTGGTGTAACTC  47 489
 SCL_RS04575  931545 ..  931570 +  -3.9  -3.50853   CTTGCCGGCAGTGCC         GCGGTTGGTTC AGCC GGAAGAACCGC          TTATACTTCGGCCCG  51 47
 SCL_RS04580  931711 ..  931743 + -11.5  -3.28712   CGTTTTTATTTGGCG      CTGTCTAATATTTGT TGG ACAATTATTGGACAG      TTATCGGAAAGCGAC  74 59
 SCL_RS04590  932658 ..  932669 +  -4.4  -3.37796   TTTCCATCGCTTGCC                GGTT TGAC AACC                 TTGTCAATGCTAGGC  51 191
 SCL_RS04595  933102 ..  933120 +  -3.9  -5.81032   TTGAGTGCGAGGAGT            TGTCATGG ATTT CCATG-CA             TTTTTTTTGACGTTG 100 102
 SCL_RS04600 NONE
 SCL_RS04605 NONE
 SCL_RS04610  937853 ..  937863 +  -2.4  -2.59564   GTGACCAAAGTGGAA                 CGGC ACG GGCG                 CTTGTAACCTCACCA  38 8
        cadA NONE
 SCL_RS04620 NONE
 SCL_RS04625  940755 ..  940797 +   -11  -4.25104   GCCTGATCCCGTGAA TCCGCGCGGGCATCCGCTCG CGC CGTCCGAGTGCCCGCACGGC TTTTGCTGACCGGGC  91 35
 SCL_RS04630  941324 ..  941364 +  -3.2  -3.13403   CGCGCCCGTACCGAT GCCGTGAAATCGGTGGAGC AAGA GCTGTATCGATGGC-CGGC  TCTTGCTCCAGCGCC  43 19
 SCL_RS04635  941920 ..  941942 +  -5.4  -2.62983   GGCCAGGGAATGATG           GGACCCGGCA TGA TGATGGGACC           TGGTATGGGCATGGG  46 256
 SCL_RS04655  946463 ..  946491 +    -6  -5.27477   CCCCGACTGGTCGTT       GAGGCGCCGA-AG TTTT CTCTTGGCGCCTA        TTTTTTACTTGGGGT  90 195
 SCL_RS04660  946934 ..  946954 +  -5.3  -3.35679   AGAAATTTCCGAGCC            GGAGGAGCT GTC ACCGCCTCC            TTCTGGATGGGCGGC  53 77
 SCL_RS04665  947780 ..  947808 +  -6.6  -3.75598   AATCGATCAACAGAT        CGGCGACGCCGA ATCCA TCCGTATCGCCG        TTGTTAAATTGATTC  62 468
 SCL_RS04675  948960 ..  948976 + -13.7  -2.96695   GATAAAGAATCGACC              CCACGCG CCG CGCGTGG              TCGTTTGCTGAAGAG  81 120
 SCL_RS04680  950047 ..  950081 +  -8.4  -4.13945   CTGATGGGCCCCGGT     GGCGGTACCGTCGG CACCAGC CCGCCGGTCACGCC     TTTTACCGTCGAGAT  77 346
 SCL_RS04685  951539 ..  951552 +  -2.4  -2.54166   TGGTGCGCTTCGACG               TCGT ACCGTA ACGA                AATTTTACTTCAACC  38 15
 SCL_RS04690 NONE
 SCL_RS04695  953368 ..  953390 +  -3.4  -3.33696   TTCGCTGCGCCCAGG           CAGGCAGA TGGTTTT TCTGCATG           TTCGTTACCACCACG  46 408
 SCL_RS04720  958123 ..  958139 +  -6.5  -3.02649   GCCCCACCTCATTAA              TCCCGTT TTT ATCGGGA              TGTCTGTAGTACGGT  54 26
 SCL_RS04725  960232 ..  960243 +  -7.2  -2.90075   AATTAGTCTGCCCAG                CGCG TCCC CGCG                 TCTCGTTCCGGCCGC  56 88
 SCL_RS04730  961243 ..  961254 +  -3.6   -4.1021   AGAAACGCGATTCGT                CGCG GGAC TGCG                 TTTCTGGTTCTGAGC  60 1
 SCL_RS04735  961828 ..  961839 +  -5.8  -3.10344   GCGGGCACGCGTACG                CAGC TTGA GCTG                 TCTGTTGGCTAAGAA  52 75
 SCL_RS04740  962338 ..  962350 +  -6.3  -3.61517   CGGTGAAGATCACTG                CCATT AGG AATGG                TTATTGCAAAAACCT  57 48
 SCL_RS04745  963027 ..  963053 +    -5  -3.06696   GATTCGTCGTTTGGC         GATCAATGTGCC CAT GGCACAGCGCTC         TATATTCCGAGAGAA  50 135
 SCL_RS04750 NONE
 SCL_RS04755  964247 ..  964259 +  -9.1  -4.16301   CGGCGCCAAGCCGTT                CACGC CGG GCGTG                TTTGTCTATGGTCTC  80 220
 SCL_RS04765  965325 ..  965347 +  -6.2  -2.87132   GATGCAGCGGCTGAT           GCTTATCGCG TAC CGCCATGGGC           TGTGTGCCACGACCG  48 473
 SCL_RS04775  966203 ..  966244 +  -9.3  -2.87132   GGCGCCACGATGAGC GCGCGCCCCGG-CGCCGC CGTGAAA GCGGCGTCTGGGGTACGG TGTCTCCCCACGCCG  62 291
 SCL_RS04790 NONE
 SCL_RS04795 NONE
 SCL_RS04800 NONE
 SCL_RS04805 NONE
 SCL_RS04810  970906 ..  970928 +  -2.6  -2.87132   CTTCGACATAAAGCG           CGCGCTGC CGTGAGA GCAGGGTG           TCTGTACGGCGGCAA  40 102
 SCL_RS04815  971519 ..  971544 + -14.7  -2.85008   AGTAGGTGGTGTTGC         CAGCGGTCGGA AACC TCCGCCCGCTG          CTGTTTCTTATGGAG  83 36
 SCL_RS04820  972062 ..  972072 +  -6.8  -3.57792   CATCCATGTCTTTTA                 CCTC ACG GAGG                 TTTGACCATGACTGA  60 62
 SCL_RS04825 NONE
 SCL_RS04830 NONE
 SCL_RS04835 NONE
 SCL_RS04840  977043 ..  977060 +  -3.4   -3.7108   TGTGTGTTCGATAAC             GTACGG AACAAC CTGTAC              TTTCAATGTAAACGT  51 521
 SCL_RS04850  977433 ..  977445 +  -5.5  -2.70932   GCCGCCAGCAAAATG                TGCCA GGT TGGCG                TCGTTCCACCCACAG  47 64
 SCL_RS04855  977822 ..  977841 +    -7  -2.82623   ATGGATCGCTGTAAG            CGCTGCGC CGAG GCGCGTCG             TCGTTGTGCCAAAGC  52 130
 SCL_RS04865  978397 ..  978417 +   -14   -4.2717   ACTGAGCGCGCTAGA            CCAGGCGG TCTAC CCGCCTGG            TTTTCCTCCGGTCAT 100 36
 SCL_RS04870 NONE
 SCL_RS04875  981381 ..  981395 +  -5.6  -3.28712   GAACGGCGGGACCGC               CGCCAA CAT TGGGCG               TTATACGGGGGCAGG  52 50
 SCL_RS04880 NONE
 SCL_RS04885 NONE
 SCL_RS04890  986301 ..  986312 +  -5.8  -3.54424   ATTCAAGGAAGTTCT                TGCC ATCC GGCA                 TTTCAGCAAGTGGCA  57 178
 SCL_RS04895 NONE
 SCL_RS04900  988377 ..  988400 + -19.6  -3.62275   GCAGGCAGTCATGGG          CGGGCCGCTG GTAA CAGCGGCCCG           TTTGCGATACTCAGT 100 51
 SCL_RS04905  989942 ..  989956 +  -2.7  -4.35461   TGCCGTAGGAAGTTG               GGCGG CAGTT CCCCC               TTTTCCTGCTGTTGC  62 425
 SCL_RS04920 NONE
 SCL_RS04925  993050 ..  993063 +  -4.5  -3.71378   TAATCCCGCTTGACC               CATCG GCAT CGGTG                TTTCCCTGTCCAATA  55 48
 SCL_RS04930  993851 ..  993875 +  -5.7  -2.54896   GTCGCTCGCCTAGGG          CTTGCCATG CGCCAGC CATGGCCAG          TACATTAGATGCAAA  48 28
 SCL_RS04935 NONE
 SCL_RS04940 NONE
 SCL_RS04945  996585 ..  996597 +  -4.7   -3.5485   GCGGTTCAGGTATCG                CGCGG TTG CCGGG                TTCGTCTTTTCCGTC  55 127
 SCL_RS04995 1007265 .. 1007319 +  -2.5  -3.54511   TCATCCCTGAAAACC CGCGACTGAGGAGCAAGCGGCGCATG CCCT CAGCCGCTGCACGACCCTCCG-CGCG TTATCGTTCCGTTGT  47 17
 SCL_RS05000 1009979 .. 1009989 +  -3.2   -3.6914   TCCCGGCGTCTATAG                 CAGT CAT GCTG                 TTATCTGTTAACATT  51 26
        soxY 1010581 .. 1010594 +  -2.5  -5.20328   AAGCGCACCGATGAT               TATAA ATTT TTATA                TTTGTTTTTTTGAGG  78 95
        soxZ 1010967 .. 1010981 + -12.8  -5.60993   TTTCAAATAAAAAAA               CCGCCC GAT GGGCGG               TTTTTTTATGGGCAA 100 51
 SCL_RS05015 1011422 .. 1011434 +    -2  -2.63596   TACATCAACCGACAA                TTGA AGCAG TCAA                TGCTGTGCAGTAAGC  38 116
 SCL_RS05020 1012002 .. 1012031 + -20.9  -4.62069   ATATTGTCTGTGAAA       CACAAAAGCCGCC GAAG GGCGGCTTTTGTG        TTTTTGGAGTCAGGC 100 208
 SCL_RS05025 NONE
 SCL_RS05030 1015612 .. 1015626 +   -10  -3.28924   CCAAAAACAAAGAGA               GGCCAA TCT TTGGCC               TTATCGAAGACGGTG  66 221
         smc NONE
 SCL_RS05055 NONE
        ligA 1027338 .. 1027374 +  -7.9  -2.96638   GGTCAATAGCTTTTA    TGTAGGTTGGGGTAAGC GCA GCGAACCCCAACAAACA    TATATCGATATTTCA  56 32
 SCL_RS05065 1027936 .. 1027972 +  -3.5  -4.12899   ATATGGAGAGCGTTA    AGTTTGTTGGGGTTCGC TGC GCTCACCCCAACCTACA    TTATTTGATTGTGCT  60 25
 SCL_RS05070 1028902 .. 1028913 +  -2.2  -3.41327   ACCATGACCTTATGG                CGGA ATTT TCTG                 TTCGTGGTTTTCTTG  45 56
 SCL_RS05075 1029366 .. 1029401 + -23.4  -5.09225   ACTAATTAAAGTCAT    ATCCCCTCTCCCCCAC GGTC GTGGGGGAGAGGGGAG     TTTTTTCAGTCAGCT 100 55
 SCL_RS05110 1034372 .. 1034383 +  -2.2  -2.79505   TAACGCGGATACAAC                G-CGG CGC CCGGC                CTTTGCCTGAAATGT  39 4
 SCL_RS05115 1035062 .. 1035074 + -10.5  -3.84825   AATCAAGGGGATGAA                GCCGG AAT CCGGC                TTTCATGTCGATGAA  80 52
 SCL_RS05120 NONE
 SCL_RS05125 NONE
 SCL_RS05130 NONE
        scpB NONE
 SCL_RS05140 1039425 .. 1039436 +  -3.6  -4.57569   TGACGTTTTGACAGG                CCTG CTGC CGGG                 TTTTTGGGCGCCTGC  69 115
 SCL_RS05145 NONE
 SCL_RS05150 NONE
 SCL_RS05155 NONE
 SCL_RS05160 NONE
 SCL_RS05165 NONE
 SCL_RS05170 1043386 .. 1043397 +  -7.2  -2.52795   GAAGATTGACAACGA                CCCG CCTA CGGG                 TAAATTGACGGCGTT  53 32
 SCL_RS05175 1044049 .. 1044060 +  -7.2  -4.68593   AGAAAACTCATGGGG                GCCG GGGA CGGC                 TTTTTCGGTCATGAA  86 176
 SCL_RS05210 1049832 .. 1049852 +  -6.7  -2.91924   CAGTTGCTGTCCGTG            GCATGACGC CGC GCGCCACGC            GTTTGTCGAAGATCG  53 20
 SCL_RS05215 1051407 .. 1051417 +  -4.6  -5.26875   TCCACCAACTTCGCG                 TCCG GCA CGGG                 TTTTTTCGTTCCGGG  91 441
 SCL_RS05225 1054662 .. 1054678 + -11.5  -3.90112   GGGTTTGACGGGTTC              GGCGCTG ACC CGGCGCC              TTTCATTGAGCCAGG  79 447
        queD NONE
 SCL_RS05240 NONE
 SCL_RS05245 1057203 .. 1057218 + -11.8  -5.00196   ACATCGAATGAAAAG              GGCCCC CATT GGGGCC               TTTTGTTATTTGGCG 100 48
 SCL_RS05255 NONE
        folK NONE
 SCL_RS05265 NONE
        panB NONE
 SCL_RS05275 1061908 .. 1061926 +  -3.8  -2.90496   CCTGATAGACAACGT             CGAATTCG ACC TGAAATCG             TGATTTGAAAACCGG  44 4
 SCL_RS05280 1062381 .. 1062398 +  -7.7  -2.64416   TAGACTGCTTTTCGT             TCCGGAG TTTG TTCCGGA              CTTGTCCTGCGCCTC  54 38
 SCL_RS05285 1065070 .. 1065099 + -10.8  -5.14563   GGGGGGGCTGGCAAG       GAAAAGGGCTGC GACATG GCAGCCCTTTTG        TTTTTTGGTACCGAG 100 155
 SCL_RS05295 NONE
 SCL_RS05300 NONE
 SCL_RS05305 NONE
 SCL_RS05315 1075214 .. 1075227 +  -5.9  -4.44667   CACGCTGGCACAAAT               CTGGC ACAC GCCGG                TTTGTTCTTGGCCGA  73 204
 SCL_RS05320 1077272 .. 1077301 +  -2.1  -3.82554   GATCGGGACATTAGT       AGACGTCTTCACA AACT TCTTAAGACGTCC        TGTTCTTTTCTTGGT  52 76
 SCL_RS05325 1078271 .. 1078290 +   -10  -2.92157   GCCATACTTCCGCGC            CCAGGAGC ACCG GTTCCTGG             TCTATAACGTTCGTA  61 256
 SCL_RS05340 1086298 .. 1086311 +  -3.1  -3.85817   CCTGGACGAAGCAAG               CTGGA CCTT TCTAG                TTTGTCGAAAAAGAT  54 453
 SCL_RS05345 NONE
 SCL_RS05350 1088448 .. 1088472 +  -7.1  -2.62616   CCATTCACTTAAAAT          GTGGTGGCAAT GCC ATTGCCGCCGA          TCGTCTGCGAAGTCG  51 248
 SCL_RS05355 NONE
 SCL_RS05360 NONE
 SCL_RS05365 NONE
 SCL_RS05370 1095681 .. 1095694 +  -2.3  -3.41636   CGCACATTTGAGAAC               GCTGC AGTC GTGGC                TTCGTTCAATTGATT  45 497
 SCL_RS05380 NONE
 SCL_RS05385 1098678 .. 1098688 +  -2.6  -3.50393   AGAGGACCGGCACGG                 TAAT CCG ATTA                 TTCTGTCCGATCAAC  47 283
 SCL_RS05390 NONE
 SCL_RS05395 NONE
 SCL_RS05400 NONE
 SCL_RS05405 NONE
 SCL_RS05410 1103665 .. 1103684 +  -9.2  -2.64258   ACCTGAAAATCAAAA            GGGCCACG TCGT CGTAGCCC             CTTGATTGGATTGGT  59 35
 SCL_RS05420 1105153 .. 1105181 +  -4.3  -4.07568   GCGCACCTTCCGTTT        GCGGGAAGCGCTG CAC CAGCGCGACCATC        TTTTCGGCGGCAGCA  61 321
 SCL_RS05435 1108037 .. 1108053 +  -3.7  -3.54424   GTGGTAAGGAGGTGC              CATGTTT CTC AGGCATG              TTTCGAGCGGTGACA  51 59
 SCL_RS05440 NONE
        raiA NONE
 SCL_RS05450 1109598 .. 1109620 +    -7  -4.64861   CGCCCGATATTCTCC          GGCGA-CGC ACGGAA GCGGTCGCC           TTTCTTTTGCGCGGA  78 214
        glgC NONE
 SCL_RS05465 NONE
        malQ 1115765 .. 1115778 +  -2.3  -3.33761   GCGAATAGCGATATG               CCGTT ATTT GGCGG                GTTTTATATGAATTG  45 40
 SCL_RS05475 1116946 .. 1116968 + -17.7  -6.02919   CCTGACCGGCCGTGA           GGCGCCGGG TTTTT CCCGGCGCC           TTTTTTTGTTTGTGA 100 192
 SCL_RS05485 1121183 .. 1121206 +    -3  -4.02022   GCATGGTCAGGAACA          G-GGCGACAAG AAT CCAGTCGCCGC          TTTGTAATGCTTGCG  58 96
 SCL_RS05495 1123270 .. 1123283 +  -2.3  -3.89131   CATGAATTTGGGGGA               AGTCC ACCC GGACC                TTTGATGCTTATTCA  52 50
 SCL_RS05500 1125339 .. 1125349 +  -8.2  -2.59748   TGTTGAAGTGAAATT                 CGCC GGA GGCG                 TGCATTATCACGATG  56 107
 SCL_RS05505 1126815 .. 1126832 +  -4.9  -3.00651   ATGACCCTCCTCCCA             CTCCCTTG CGT CAAGG-AG             CTTTGTAGTGTCCGG  46 390
 SCL_RS05515 NONE
 SCL_RS05520 NONE
        secD NONE
        secF 1131742 .. 1131767 +  -4.6  -3.92641   AAGAGTTACATCCCT         CGCCCGCG GCGCACCAAA CGCGGGCA          TTTCTCCCTCGCATT  60 153
 SCL_RS05535 1132551 .. 1132591 + -27.7  -5.31456   CGCTGATTGGACAAC  GGCGTCCATGGGTCCGAGG GAA CCTCGGGCCGATGGACGCC  TTTTTTATGGCTTAA 100 74
 SCL_RS05540 NONE
        ntrB 1134819 .. 1134845 +  -4.4   -3.1247   GATATTAAGAGGTGT        GCGCG-CGAAG CGCGCA CTTCGGCCCGC         TTCCCTCTCCCGCGT  47 33
 SCL_RS05550 1135875 .. 1135891 +  -3.7  -4.05402   CTGAGCGAAGCGAAG              CCCAA CAGCAGT TTGGG              TATTTTTCGTTGGGG  58 198
 SCL_RS05555 1136637 .. 1136655 + -14.6  -3.03474   TCTAGGCTGGGATTC             CCACCGAC CAC GTCGGTGG             TATATCGTTATACCA  91 106
 SCL_RS05560 NONE
 SCL_RS05565 NONE
 SCL_RS05570 1139202 .. 1139223 +   -13  -2.75844   GTGAAATAATTCCTT           CACCCGCG GCCCAG CGCGGGTG            CTTTCCACTACAAGC  76 68
 SCL_RS05575 1140798 .. 1140840 +  -7.6  -3.04144   CCCCAACAAAAATTA TCAACGTTGGGGTTCGGCGT TTC ACGCCTCACCCCAACCTACA TCTTAAAGGTGACAC  57 187
        glyA 1143725 .. 1143739 +  -5.6  -3.73072   CGTAAGGGACCGCGG               GGCGGG ACG TTCGCC               TTTGATGCGCCGCTT  58 36
 SCL_RS05590 NONE
        ribD NONE
 SCL_RS05600 1146142 .. 1146155 +  -5.2  -4.87626   TTTTGGCCAACTGTA               CGGG GCGCGA CCCG                TTTTTCGTCTTGAGC  80 82
        ribB NONE
 SCL_RS05620 NONE
 SCL_RS05625 1150302 .. 1150321 +  -3.5  -2.81966   AATCAAGGCCGAGCG            TTCCACG GCCTGA CGAGGAA             TCTGATACGGTTTCC  43 13
        thiL NONE
 SCL_RS05635 1152693 .. 1152719 +  -2.4    -2.567   AGGATTAACAGGATT         GAAAAATATATT TCG AATTTCTTTTTC         CTTAATCCTGTTAAT  38 64
 SCL_RS05640 NONE
 SCL_RS05645 NONE
 SCL_RS05650 1153786 .. 1153798 +  -6.9  -3.53224   ATGACAAGCCGATGC                CGGTC TGA GGCCG                TTTCCGGCCCGCGTC  60 18
        tsaB 1154708 .. 1154718 +  -3.2  -4.57341   GCTCTCCGGTTTGCG                 TTCG TGG CGGA                 TTTTTGCCAGCCGTT  69 212
 SCL_RS05695 NONE
 SCL_RS05700 1166716 .. 1166757 + -11.6  -3.23711   GGTTTCGACGATGAC CTCGTCG-GGACGGCCGTGG TACA CCACCGCC-TCCGCGTCGAG TTCGTGGCTTCTGAG  70 219
 SCL_RS05715 1171645 .. 1171658 +  -9.5  -3.38522   GTCAAGGGGCGCTTG               CCGGG CTTG CCCGG                TTGAATATTTTTTTC  70 8
 SCL_RS05720 1172448 .. 1172476 +  -7.4  -2.91274   GAACTCGTGCCGCTC       CGGTTTGCG-CGC GATG GCGGCGCGGATCG        TGTCCTTCAAATCCC  53 210
 SCL_RS05745 1178115 .. 1178142 +  -5.4  -4.07568   GTCCGACACGTAACG        CCGCGCCAGCGC CACG GCCTTGGTGCCG         TTTTCGAAAAAAGCG  63 479
 SCL_RS05775 NONE
 SCL_RS05780 1184414 .. 1184439 + -14.8  -3.36823   AAACAACAAAAGATG         TCGTGGGGTG ATACAC CACCCCACGA          TTAGATTTTCAGCCA  95 53
        mtnA 1186872 .. 1186897 +  -2.6  -4.30719   TCAGTTACTTATCAA         TAAGTTATCC ACGATA GGGTAACTGA          TTTCTTATGGAACAA  60 180
 SCL_RS05795 1189506 .. 1189523 +  -2.8  -2.50988   AAAGATAACAGTTCA             GATTTA ATCCTG TAAATC              CTGTTAATCCTGTCC  40 72
 SCL_RS05800 1190846 .. 1190861 +    -4  -5.42259   CAGTGGGCGACAAGG              GATTTC TGCG GAAGTC               TTTTTTTAGCGGTAA  86 210
 SCL_RS05805 1192049 .. 1192063 +  -5.6  -3.54755   CGCGGGCATCAACGG               CGTGCT GAT GGCGCG               TATTATTTGACGGCT  55 1
 SCL_RS05810 1193322 .. 1193338 +  -2.1  -2.79183   CAAGGCCGTGCTGTG              ACAGCCA CGG TGGCGGA              TATCCTGCGCCTGGC  39 25
 SCL_RS05815 NONE
 SCL_RS05820 1195298 .. 1195316 +  -8.8  -3.78233   TATAAGATTTGGGAA             CCGCGG ATGAACG CCGCGG             TTTCAATATTAATAT  73 36
        aroA 1196679 .. 1196693 +  -2.8  -2.92111   ATTAAAGATAAATGC               ATGAAG ATT CTTCAA               TCGCTTTTTTAAAAA  42 64
 SCL_RS05830 1197438 .. 1197449 +  -4.4  -3.53012   AGCGGCATCGGCCGG                GGTA ATTC TACC                 TTTCCAGGGAACGGA  52 21
 SCL_RS05835 1199230 .. 1199248 +  -3.7   -4.4017   CGGCGGGCATGACAG             CTCGGAC ACCTA GCCCGGG             TTTTGTGGCAATTCG  66 13
 SCL_RS05840 1199740 .. 1199762 +  -6.3  -5.60993   CGGCGGAGCACAAAA          CGGCATGCGG GTCA CC-CATGTCG           TTTTTTTATGACCCA 100 55
 SCL_RS05845 1200216 .. 1200226 +  -4.6  -3.07005   AAATAAAAAACTTGG                 CGCT CTT GGCG                 TCTTGGCGGTTAATT  47 107
 SCL_RS05850 NONE
 SCL_RS05855 NONE
       rfaE1 NONE
        rfaD NONE
 SCL_RS05870 NONE
        rfaH 1206059 .. 1206072 +  -2.3  -2.77899   GCCACGGTTGATTCC               GCCTC GATT GAGCC                TGCTTAGTCCACAAG  39 5
 SCL_RS05880 1206731 .. 1206787 + -14.7  -3.32343   TGCGGCTGGAATAGC GGT-G-GCGCCACCCGGGTGATATC CGCCAGAAC GATATCACCCGGGTGGCGCATGAAC TTGTCGGGCTGTGCG  95 27
 SCL_RS05885 1207866 .. 1207893 +  -3.2  -2.64973   GTGGTACAAGTCCTA        TCACGGCGTTGC CTGA GCCGCGCCGGAA         TCCTGTCCCGTTGAT  40 10
 SCL_RS05890 NONE
         gmd NONE
 SCL_RS05900 NONE
 SCL_RS05905 NONE
 SCL_RS05910 NONE
 SCL_RS05915 NONE
        neuC NONE
        neuB NONE
 SCL_RS05930 NONE
 SCL_RS05935 NONE
 SCL_RS05940 1220545 .. 1220558 +  -6.7  -3.18199   ATGGGACCGTCATTT               TCCAC TCCG GTGGA                TTGAATTACGACTTC  56 66
 SCL_RS05945 NONE
 SCL_RS05950 NONE
 SCL_RS05955 NONE
 SCL_RS05960 NONE
 SCL_RS05965 NONE
 SCL_RS05970 NONE
 SCL_RS05975 NONE
 SCL_RS05980 1228424 .. 1228436 +  -4.7  -3.29144   GAAAGCAGTGAGCAT                GCGCC CCC GGCCC                TTGTGCCAGCCATGA  49 30
 SCL_RS05985 NONE
 SCL_RS05990 NONE
 SCL_RS05995 1230499 .. 1230524 +  -2.5  -2.85337   CTGCATCCCGTCATC         TAGTCCGGCGTC GGG GATG-CGGGCAA         TCGTTCGTTACCTCT  39 23
 SCL_RS06000 1232202 .. 1232219 +  -2.7  -3.67597   CCCGGGCGCTTGTAT             CATTTTG CGCG CAGGATG              TTGTTACGTGGAGCG  51 90
 SCL_RS06005 NONE
 SCL_RS06010 NONE
 SCL_RS06015 1234595 .. 1234625 +  -2.5  -2.76093   GTTTCTGCCGATCAG       ATCCGGCTCGTGA AATAA TTATGAACCGGAA       TACCTTTGTTCCCGT  39 8
 SCL_RS06020 NONE
 SCL_RS06025 NONE
 SCL_RS06030 1237650 .. 1237667 +  -4.9   -2.5619   AGACTTTCCTCGCTA             TTGTTGA AGCG TCAACAG              CTTGCTAGGTTTTGA  44 0
 SCL_RS06035 NONE
 SCL_RS06040 NONE
 SCL_RS06045 NONE
 SCL_RS06050 1241800 .. 1241810 +  -5.4  -4.34402   AATTATTTTATCAGC                 CTGA TCC TCAG                 TTTTGGTCTGGCAGC  69 93
 SCL_RS06055 1242863 .. 1242874 +  -2.2    -3.727   ATAGATAGTCGACAA                TTGC ATGA GCGA                 TTTGGCTATACTGAA  50 78
 SCL_RS06060 NONE
 SCL_RS06065 NONE
        galU 1247239 .. 1247251 +  -4.7  -2.72144   TATAATCCGCCCGCA                GCAGG TTA CCGGC                ATTTCGCAGCACTCA  45 126
 SCL_RS06075 NONE
 SCL_RS06080 NONE
        mtnP 1249436 .. 1249447 +  -7.2  -4.07568   TCACCACCTTCCAGG                CCGG AAAG CCGG                 TTTTCGAACACGACC  70 482
 SCL_RS06095 1250408 .. 1250424 +  -2.9  -4.66609   AGGCGCAGAACAGCG              CCGGG GTCGATG TCCGG              TTTTTCGATGAACTC  69 291
 SCL_RS06105 1254485 .. 1254513 +  -2.9  -4.59853   ACTTGACTGTCGGTA        GCCCGGATGGAGC GCA GCGGAATCCGGGA        TTTTTGACCGCTTCC  67 71
 SCL_RS06110 NONE
 SCL_RS06115 NONE
 SCL_RS06120 NONE
 SCL_RS06125 1256549 .. 1256559 +  -3.2   -3.0976   TGAATCCATAGTACC                 CGAG TAA TTCG                 TCTTGAAATGTTGCA  43 19
 SCL_RS06130 1257037 .. 1257074 +  -9.4  -3.32993   AATATTCGCTTATGC   TTATCTTATTGACGTT CGACAA AGCGTCAATAAGACAA    TTACTATGTGCCTCG  66 237
         ald NONE
 SCL_RS06150 1262841 .. 1262858 +  -3.4  -3.01791   CGCCGCCTCCGCCGC             GCGTCGG CTGAT CC-ACGC             TATTCGCCCACGCAT  43 15
        lolA NONE
 SCL_RS06160 NONE
 SCL_RS06165 1265605 .. 1265615 +  -4.6  -3.05844   ATAAATCCTTCCATC                 CGTG AGA CGCG                 TATTCCCATGAGACA  47 48
        crcB NONE
 SCL_RS06175 NONE
 SCL_RS06180 1267606 .. 1267620 +    -7  -2.72152   AGCTGAAAAAATAAC               AGCCGC GTA GCGGCG               TCCGTTTGTCCTGCC  52 16
 SCL_RS06185 NONE
 SCL_RS06190 NONE
 SCL_RS06195 1270890 .. 1270901 +  -7.2  -2.70298   TCCGGGACGATCGAG                CCGG CATT CCGG                 GTTATAATTCGCCCA  54 105
        cobA 1272659 .. 1272677 +  -6.6  -3.63515   GGTCTGAAAGCGGGG             CCGCGGAG CGT TTCGGCGG             TTCTTGCGCCTGCCC  59 371
 SCL_RS06285 NONE
 SCL_RS06290 NONE
 SCL_RS06295 NONE
        cas6 1290975 .. 1290990 +  -6.8  -3.05463   AGGATATCAATGAAG              TCCGGC CGGT GCTGGA               TTAAGTCACGGGGCT  54 6
 SCL_RS06305 1291404 .. 1291417 +  -9.5  -3.04144   GCCTGCCCGAATCGC               GCCGC AAGG GCGGC                TATTAAGCATACGCA  67 6
 SCL_RS06310 1292466 .. 1292481 +  -3.2  -5.75945   TGGGCCGCAACAAGG              CCGC CAAGAAAA GCGG               TTTTTTTTGAAACAT  95 141
 SCL_RS06315 1294275 .. 1294297 +  -7.6  -4.82901   GCGTGGAAGCGCCAC           CGCCGAGATC GAT GATGCCGGCG           TTTTTGTCGACGCCG  88 496
 SCL_RS06355 1299860 .. 1299893 + -13.9  -3.53811   GTCATGCCCGCGGAG     GCGGGCATCCAGAAA TTAT TTCCTGGATTCCCGC      TTTCGCGGGAATGAC  89 44
 SCL_RS06370 1302123 .. 1302145 + -17.8  -3.17571   ACGTATCCGTCGCGA           CAGGCTGTGC CGT GCACAGCCTG           TTCGCTTCAGGAATT 100 40
 SCL_RS06380 NONE
 SCL_RS06385 NONE
        lysS NONE
 SCL_RS06395 1307069 .. 1307081 + -10.5  -2.97735   GATCCGTCATTAGGG                CCCGC TGT GCGGG                TATACTATTTAACTA  68 28
 SCL_RS06400 NONE
 SCL_RS06405 NONE
        hflK NONE
        hflC NONE
 SCL_RS06420 1311109 .. 1311122 +  -3.8  -3.71649   TTGTACATAATTAAC               CGCT AACATA AGCG                TTTCCCGTTTCGAAA  53 20
 SCL_RS06425 1312424 .. 1312437 +  -4.5  -4.09459   AGATACTATTTCATT               CGTAG TTAT CTGCG                TTTATCCGTTTTTAC  62 119
 SCL_RS06430 1313826 .. 1313840 +    -7  -4.08692   CGGCAAGCGGTTTGG               CCGGCG TTA CCCCGG               TTTTCCCGGCCCTTG  70 64
 SCL_RS06435 1314410 .. 1314433 +   -16  -4.46775   CCGGAGCGGCATCCA          GCCG-GGGCGG AGT CCGCCCGCGGC          TTTGTATTTTCAATC 100 52
         rnr NONE
 SCL_RS06450 NONE
 SCL_RS06455 NONE
 SCL_RS06460 1319067 .. 1319121 + -11.4  -3.03243   ACAGTAGGGCGGAAT AGCGACAGCGTATTCCGCCGGATG CCCGCTC CATCCGGCGCAATACGGTTGCGCC TATTGCGCCCTGCGT  72 87
 SCL_RS06465 NONE
        rpsR NONE
 SCL_RS06475 1320512 .. 1320524 + -10.5  -2.80816   CGCGGCTGTTCATCA                GCGCG CGC CGCGC                TATAATGCGTGACGC  66 64
 SCL_RS06480 1321965 .. 1321975 +  -5.4   -4.7657   TACACTTCCGCCGGG                 TTCG ACT CGAA                 TTTTTAAAATTTTTA  76 8
         alr 1323176 .. 1323191 +  -4.6  -3.51168   GCCACGTGACTGAGC              GCATCC CGCG GGTTGC               TGTTTAAATATTTTT  52 3
 SCL_RS06490 1324783 .. 1324805 +  -9.1  -3.78904   ACTGCAAACGCGTGC           CGGCGACCT CGATC ACGTCGCCG           TTCTTCAGTTTGCTG  71 151
 SCL_RS06525 1334641 .. 1334669 +  -8.8  -2.52018   TTTTTCCACTCAGCC        GTTCGCCCTGAG CCTGT CGAAGGGCGAAC        ACTTTGTTGGTTGTC  59 46
 SCL_RS06550 NONE
 SCL_RS06555 1338877 .. 1338903 +   -21  -4.46233   AAGCGTCATCCAACA         CAAAAGCCGCCC GGT GGGCGGCTTTTG         TTTATTTGCACTTGG 100 39
 SCL_RS06610 NONE
 SCL_RS06615 1348269 .. 1348292 +  -5.2   -5.0538   TTCGATGAAATCCGG          CAGGGCTTCG GGGG TGAGGCCGTG           TTTTTTCGGGTCGCG  83 310
 SCL_RS06625 NONE
 SCL_RS06630 1350522 .. 1350533 +  -2.2  -3.03006   AAGCACGACCCATCC                TGTC TCCC GGCA                 TATATCTGCGTTAAT  42 83
 SCL_RS06635 NONE
        lolD 1353097 .. 1353112 +    -6  -2.85351   CGCGAAACAGGATGG              CCAGCG CCGC CGCCGG               TATCATCTGGAACGG  48 443
 SCL_RS06650 1355636 .. 1355654 + -11.6  -3.46106   GGTACGCGGACTGAA             CCGCCGCG GCG CGCGGCCG             TCTTTGAGGTTTTGG  75 27
 SCL_RS06655 NONE
 SCL_RS06660 NONE
        msbA NONE
 SCL_RS06670 NONE
 SCL_RS06675 NONE
 SCL_RS06680 1360591 .. 1360646 +  -2.8  -3.18849   TAGACAGGATTTACA GGATTAACAGGATT-AGAAAAAATAAG ACC CGGGTTTCTTTTGAATCCTGTAAATCC TGTTAATCCTGTCCA  45 42
 SCL_RS06685 1361178 .. 1361207 + -19.5  -4.09292   AGTACGAGCCTCAAA       CAAAAAACCCGCC TTGC GGCGGGTTTTTTG        TTTACTTGTTGCCTT 100 44
 SCL_RS06695 1365051 .. 1365080 +  -4.9  -5.05606   GGCAAAACTTTGATT       TTGAACCGCCTTG GCGC CTTGGCGGTTAAA        TTTCTTTTTGTTAGA  80 28
 SCL_RS06700 NONE
 SCL_RS06705 NONE
 SCL_RS06710 1367269 .. 1367288 +  -2.8  -4.57569   AGGCCGATCAGCGTA            TTCG-GGTC GTC GCCCTCGAA            TTTTTCCAGCAATGC  69 177
 SCL_RS06730 NONE
 SCL_RS06735 NONE
 SCL_RS06740 NONE
 SCL_RS06745 1374248 .. 1374264 +  -8.7  -4.49906   CGTTTGGTTTTCGGC              GCGAAGC GCC GCTTTGC              TTTCTTTGCGTCTTC  85 91
        fabD 1375280 .. 1375324 +  -5.3  -3.25223   GATTAACAGGATTTA CAGGATT-AAATCGAAAATG CGGATT CGTTTTTGTTTTGAATCCTG TTAATCCTGTAAATC  52 45
        fabG NONE
 SCL_RS06760 1376484 .. 1376520 + -18.1  -3.21934   GATAACTCATTAGAA    TAAGAGGCCGTCATCCG CAT CGGGTGGCGGCCTTTTG    GTTTTATAAAGCGCG 100 39
        fabF NONE
 SCL_RS06770 1379276 .. 1379292 +  -3.7  -3.48657   AAGAGGATAAAAAAC              TCGTGAA ATC TTTGCGA              TCTTTGCGTCTTTGC  51 85
 SCL_RS06775 NONE
 SCL_RS06780 1381188 .. 1381198 +  -3.2  -3.14284   GAACTGAACCCATAA                 CATG CCG CGTG                 GTTTATTCATCACCC  43 34
 SCL_RS06785 NONE
        holB NONE
 SCL_RS06795 NONE
 SCL_RS06800 1384024 .. 1384059 +    -3   -4.4634   AGGCAGGCGAAACCG    CCCGCGTGACGAAGCC TTCA GGCGGCGTCGCGTACG     TTATTGTTTTTTCTT  64 17
 SCL_RS06810 1386781 .. 1386791 +  -4.6  -3.73294   AACTTTGTATTTGAG                 GGCG CCA CGTC                 TTTAACATGTTTTTA  55 10
 SCL_RS06815 NONE
 SCL_RS06820 NONE
         tal 1390087 .. 1390102 +  -3.2  -4.42464   AACCAAATAGCAGCT              CCAAAC AACC GTGTGG               TTTATTTGCCCCCTT  64 208
 SCL_RS06840 1393530 .. 1393582 +  -7.6  -3.02144   CGATGCGGGCATACG CCGGTCGCTC-GGCCGCTGCCAGCGC CGC GCCCTGACAG-GCCTTGAGCGCCTGG TATTCCGCGGGATGC  54 242
 SCL_RS06860 1395367 .. 1395385 +  -4.4  -3.07895   AATTCCACCAGGATA             GCGCGCAG GTA CTGCCGGC             TGTGTTCCGGGTGCG  45 177
 SCL_RS06915 1403093 .. 1403104 +  -7.2  -3.64822   CCACCGTCGACAGGC                GCCG GCCC CGGC                 TTTCCGTCCCCAAGT  62 113
 SCL_RS06940 NONE
 SCL_RS06945 NONE
 SCL_RS06950 NONE
 SCL_RS06955 1412460 .. 1412472 +  -6.9  -3.14132   TAAACAGACTGATAT                CTCGC AGG GCGGG                TTAGTCGCGCAGCGA  54 56
 SCL_RS06975 NONE
 SCL_RS06980 NONE
 SCL_RS06985 1417410 .. 1417457 + -17.7  -3.53444   ACAGCTTTTCGAACT CCGCGCGCG-GGTACTGCGCGGC CACC GCCGCGCGGAACCGCG-GCACGG TTTCCCAGCGGGTGA  95 191
 SCL_RS07000 1420131 .. 1420143 +  -6.3  -3.61517   AGTGGCTATACCTGA                CTGAT TTA ATCAG                TTATTAGCACGCACT  57 167
 SCL_RS07005 NONE
 SCL_RS07010 1421008 .. 1421030 +  -2.6  -4.66953   CAGCTACTGAAATAG           CCGGGTTT TAAGGCC GGGCCCGG           TTTTTCGCCTGTTGC  65 31
 SCL_RS07025 1423977 .. 1423987 +  -2.4  -3.65046   CGCGTATCGCACCAG                 GCCG TTC CAGC                 TTGTTGAAATGCCGA  49 477
 SCL_RS07045 1428149 .. 1428160 +  -3.6  -5.00616   GGCCTTGTAAGCCCG                GGCG GCGC CGTC                 TTTTTTGCCGGCGCG  78 341
 SCL_RS07055 1429637 .. 1429660 +  -4.5  -3.68222   CCCACTTGAAATGGC          GCGCCTCTC ACAGGC GAGAGGTAC           TTATTAGAATTACGC  55 160
 SCL_RS07060 1430200 .. 1430213 +  -8.1  -4.08216   TATACGTCGAACGGT               GCGCA ACGC TGCGC                TTTTGCGCACCCTAC  77 112
 SCL_RS07080 1432937 .. 1432961 + -18.7  -3.53811   GGATAAGCAAAAAAA          CAAAGCCCGCT TGT AGCGGGCTTTG          TTTCAAAAAACTGCG 100 143
 SCL_RS07230 1473773 .. 1473798 +  -7.6  -2.64155   GTTATCTGTGGGTTT         GTCTG-GCCCG ACTGA CGGGTGCAGAC         TAAATTTAAGGGACA  54 101
 SCL_RS07235 NONE
 SCL_RS07240 NONE
 SCL_RS07245 1478891 .. 1478903 +  -9.1  -3.30159   GCTGATGGGATGATA                GGTCC GTC GGACC                TTGTGGACGGCTTCA  63 200
 SCL_RS07330 1497291 .. 1497332 +  -7.9   -3.5002   TTCCAGGGTGGAAAT CTCGCGGTGATTGAG-GCCG AAG CGGCGCTCGACCACTTCGCG TTGCTTGTCGTTGAG  60 257
 SCL_RS07410 1512537 .. 1512547 +  -2.4  -3.29461   AGTCCGTGGTGCCAC                 CCGC TTT GCAG                 TTATAAAACAGCTTG  43 48
 SCL_RS07415 NONE
 SCL_RS07420 1513793 .. 1513808 +    -6  -4.56775   TTTTTTTCGCGGCCG              CCAGCG TCAG CGCGGG               TTTTTCCACCAGCAT  76 414
 SCL_RS07430 1515005 .. 1515015 +  -8.2  -3.92373   GCCTCATCGCGCGCG                 CGCC GCT GGCG                 TTTCTCCATCAAATA  71 234
        mrcB NONE
 SCL_RS07455 1521060 .. 1521079 +  -2.8  -3.96618   TATCCGCCCGGCATC            CGGCG-AAC TTT GTTACGGCG            TTGTTTCGAGTTCCG  56 50
 SCL_RS07460 1521603 .. 1521620 +  -3.4  -5.78622   GCAGCAGCTGCATTG             CCAGAGC AGCAA GC-CTGG             TTTTTTTTGCCATGC  95 120
 SCL_RS07465 1522471 .. 1522483 +  -3.4  -4.25104   GTGCTGGCCCATTTT                TCCA GGTGA TGGA                TTTTCGTGCCGCACG  64 490
 SCL_RS07535 1535625 .. 1535646 +  -4.4  -3.72576   GGTGGGTTTTGCTTG           CCCTGC ACATAGGCCA GCAGGG            TTTCGTCGGGCACCG  56 461
 SCL_RS07555 1538166 .. 1538178 +  -3.4  -3.21395   GCGTTCTCGGCCAAA                CATG GGGAG CATG                TGTTATGAGGCGACT  45 5
 SCL_RS07560 1538979 .. 1538998 +  -2.1   -4.1822   TGTCTCGACAGAACA            GCCACAA ACTCTC TTGTGCC             TTTCTTAAAATCGGA  56 159
 SCL_RS07580 1543074 .. 1543087 +  -5.3   -4.0641   TCCCGCCACCCGCGC               GGAAT AAAC ATTCC                TTTCTGTCCGTCACC  63 19
 SCL_RS07585 1545021 .. 1545050 + -20.1  -5.78622   CGCTGAAAAGAACCG       CCCCGGTGGCCGGT CTA ACCG-CCACCGGGG       TTTTTTTTGAAATAC 100 193
 SCL_RS07590 NONE
 SCL_RS07595 1546198 .. 1546214 + -15.1  -2.76492   GGGCGGCGTTTTTTC              CGGCGGC TGG GCCGCCG              ATTTGGGATCGATGA  78 56
 SCL_RS07635 NONE
        gspD NONE
        gspE 1561446 .. 1561474 +  -2.9  -4.29227   GAAATAACAGTTGTA        GCCCGGATGAAGC GCA GCGGAATCCGGGG        TTTGTTAATGCTTCC  62 56
        gspF NONE
        gspG NONE
        gspH NONE
        gspI NONE
        gspJ NONE
 SCL_RS07675 NONE
        gspL NONE
 SCL_RS07685 NONE
 SCL_RS07690 1568804 .. 1568822 +  -4.4  -2.89564   TGCAAGACCGTCGGA             CAGCCCGT ACC ACCGGCCG             TGTCTGCCGTCGAGA  44 426
 SCL_RS07730 1577097 .. 1577118 +  -9.3  -3.57561   TCCGCGCATAATCCC           CGGCCGCGC ACAG GCGCGACTG            TTTGACGCGTTCGCG  68 107
 SCL_RS07755 NONE
 SCL_RS07760 NONE
 SCL_RS07765 NONE
 SCL_RS07770 1591518 .. 1591540 +    -4  -3.28791   GCATGTGCATGCCAA           TCTGGCCGGC GCC GACGGTCACA           TTCTGGAAGCCCACT  48 501
 SCL_RS07790 1593900 .. 1593923 + -13.2  -2.53876   AAGTAATTCACGCCG          GCGTGACTGCG AAC CGCAGTC-CGC          TCAATTCCGGTGCGA  78 35
 SCL_RS07795 1595665 .. 1595677 +  -4.7  -3.05816   CAATAAGCAACCCGC                GCCGC AAG GCGGA                TTCGCTCCGCCATCC  47 35
 SCL_RS07800 1597665 .. 1597686 +  -3.1  -2.78816   TTCTAGGCCCGGCAC           GTAGGTATA TTTG TATATTTAC            TGTAGTGGAGAATGA  41 35
 SCL_RS07805 1599134 .. 1599161 + -18.5  -5.75342   AGCCGTATCAACAAA        CGCCATGCCGG GATTTG CCGGCATGGCG         TTTTTTTTGCAAAAA 100 54
 SCL_RS07810 NONE
 SCL_RS07815 1602091 .. 1602109 +  -7.4  -5.55769   CTTTCTGTGTCACGC             CGATTGTC CAC GGCGATCG             TTTTTTGTTGTGCAA 100 185
 SCL_RS07820 1605071 .. 1605096 + -19.7   -5.4505   TTTCCCATTAGTCAA         CGGCGCCGTCC TCGC GGGCGGCGCCG          TTTTTTCTTACCCGG 100 100
 SCL_RS07825 1605674 .. 1605688 +  -5.6  -3.72576   TGGTGATGATATTGG               CCATGG CGG CCCTGG               TTTCCTGCGGCACCG  58 118
 SCL_RS07830 1606443 .. 1606462 +  -3.6  -3.72231   GACTTCTCGGCGACA            CACATCAA CCCA TTAATGTG             TTCTTGCGTATGTCC  53 169
 SCL_RS07905 1628509 .. 1628525 +  -5.9  -3.95324   GCCAGGCACCGTACA              TATTGTG CGC CACGATA              TTGTTCTTGAACGTG  62 499
 SCL_RS07965 1642232 .. 1642261 + -19.3  -5.07652   TATTCTGAAAATTAA       CACCCCTCACGGC GGTT GCCGGGAGGGGTG        TTTTGTTTTACAGCG 100 46
         map NONE
        glnD 1666755 .. 1666804 +   -15  -3.05384   GAGTCTCCCGAAGCC GCC-GTG-GCCGCGCCAGGGAGGG CATG CCTTCCCTGGCGTCGCACCCAGGC TTCGATAAACCCCAG  91 132
        queG 1677181 .. 1677193 +  -3.3  -3.66654   ATCGTCACCGGTCCG                GGGAG AAC CTCCA                TTTGAGATTGCCGTA  51 516
 SCL_RS08130 NONE
 SCL_RS08135 NONE
 SCL_RS08140 1681024 .. 1681046 +  -4.7  -3.36803   ACATCAGCTCCACGC           CCAGCTCCT CGCGC AGGCGCCGG           TTGTCGATGCGCTTG  50 109
 SCL_RS08190 1691980 .. 1692000 +  -9.7  -3.34013   TTCGGCATGGGCGGT            CGGATCGTG CGA CACGATCGG            TTGGTTCCAGCCCTC  63 422
 SCL_RS08210 1695861 .. 1695894 + -17.7  -4.35524   CAAGGCATTAACTGT     CATAAAAAAGCCGGGC AAT GCCCGGCTTTTTT-TG     TTTTAAATTTCCCCA 100 41
 SCL_RS08215 NONE
 SCL_RS08220 1698337 .. 1698350 +  -2.3  -4.12254   GCGAGAAGGCCAGCG               CCAGG ACGG CCTGA                TTGTTTGTCATGGTC  59 241
 SCL_RS08325 1719005 .. 1719016 +  -7.2   -3.5393   TAAAAATTCCCCCAG                GCGG TGCT CCGC                 TTTGAGCCCGATCAT  62 243
 SCL_RS08340 NONE
 SCL_RS08345 1724605 .. 1724632 +    -9  -2.63089   AATAGCGATAAAAAA        AAGAGGCGGCCG TTCA TGGCCGCCTCCG         GTATTTCCACTGATC  59 43
 SCL_RS08350 1728363 .. 1728402 +  -7.3   -2.7736   TTTTTGGAACGCAGA  TGAACGCAGATCAGAAA AATTTA TGTTTTATCTGCGTTCA   TCATTAAATATGAAT  55 43
 SCL_RS08370 NONE
 SCL_RS08375 1736800 .. 1736827 +  -3.2  -5.41143   TCCCGGATATCGCCG        GCGCGCGCCGGT TCGT ATCGCCGCTCGA         TTTTTTTCCCGGATA  91 156
 SCL_RS08385 1738239 .. 1738255 +  -5.1  -3.74693   ATTCGAATGAAGTTT              TCAAGGA CAT TCCCTGA              TTTAATCGAATGCCG  58 9
 SCL_RS08390 1739935 .. 1739945 +  -6.8  -4.90869   ATCTGCGCTCACCCC                 CCGA AAG TCGG                 TTTTTCCTTAGTGAT  85 110
 SCL_RS08395 1741379 .. 1741391 +  -3.4   -3.4678   GGCGCAAACAACCGG                GACA AGAAA TGTC                TTCTACTCTGCCGGT  49 44
 SCL_RS08400 1742998 .. 1743026 +  -6.7  -3.02511   CCTCAGGGTGCAATA        GTCTGCCAGAA ATCGTCA TGCTGGCAGGC        TCTTCCGGGCCTGCG  54 25
 SCL_RS08535 NONE
 SCL_RS08605 NONE
 SCL_RS08610 NONE
 SCL_RS08615 NONE
 SCL_RS08620 1791558 .. 1791582 +  -4.9  -4.17657   TTCGGTCGTTCGCGC          GGTTAACGGGA CCT TGCCGTAAGCC          TTTTACGGTATCGTC  62 130
 SCL_RS08625 NONE
 SCL_RS08630 NONE
 SCL_RS08635 1795904 .. 1795915 +    -3  -3.90048   ACACCAACATCCTAA                TTTC ACGG GAAA                 TATTTTTCCGGCGGC  54 174
 SCL_RS08640 1798169 .. 1798190 + -14.4  -5.80817   GGATTCATCCAGTGA           CGGCCCGG CAAATA CCGGGCCG            TTTTTTTGTATTCAA 100 52
 SCL_RS08645 1801075 .. 1801091 +  -7.9  -5.95539   CATCCAAACAAAAAA              GCCGGGT TAA AGCCGGC              TTTTTTTGTTTGGCG 100 49
 SCL_RS08685 1806095 .. 1806116 +  -2.2  -3.18383   CGTCAACCTTGATTT           TCACGCCA TAGACT TGGTGAGA            TTCATGCGTCCCCGT  43 105
 SCL_RS08690 1807741 .. 1807758 + -11.3  -4.53607   CAGACCACAGAAAAA             GACCGTC TTGC GACGGTC              TTTTGTCCTGCTTTT  95 295
 SCL_RS08710 1812022 .. 1812072 +  -9.1  -3.03159   CGCGAGCATCCGCAT CCGATCTTCCGCCAGCGCATAGCAA CAA TGGC-GTGCGCTGGCGGAA-ATCAC TGTTCCCGGCCTTCA  63 59
 SCL_RS08715 1812842 .. 1812882 + -16.9  -2.87931   AGAAGTAAGCACGCA  ATCCATCTGGCGCCAGACA GAC TGTCAGACGCCAGATGGAA  TCTGTGAAGGGTAAA  93 33
 SCL_RS08720 NONE
 SCL_RS08725 1814020 .. 1814039 +  -2.1  -2.77182   GGGAGCCTCTACATG            C-CCTGGC TATTT GTCAGGAG            TGATTCCCTATGAAC  39 98
 SCL_RS08730 1814739 .. 1814764 +  -6.1  -4.07568   ACTAAAAAATTCAGC         CACTCAGTACG CTAG CGCACTGAATG          TTTTCAGCAGAGGAG  67 11
 SCL_RS08735 1815588 .. 1815606 +  -2.3  -4.66318   TCCTGGGGCTTGTCT             CCTCCTA CACCA TGGGCGG             TTTTATTCACATCCT  65 177
 SCL_RS08740 1816327 .. 1816352 +  -4.7  -4.12188   TTGACTTATTCACTC         TCCG-GCTTGAC CGT GTCAGCCCCGGA         TTTTCCCAATCCTGC  62 190
 SCL_RS08790 1825922 .. 1825937 +  -7.5  -2.70946   CGTAATCCACACTAA              CCGGC GCGCTG GCCGG               ATCTTTATGCCGGGC  52 141
 SCL_RS08800 1829099 .. 1829111 +  -3.3  -4.05529   CAGAGTACGGCGACG                CACAG ACG CTGAG                TTGTTTGATGATTAT  56 242
 SCL_RS08805 1831243 .. 1831274 +  -2.2  -4.16943   CACCCTGTTTGGCGC      GCAACAAG-GCGG CCCGCAC CCGCTCATGCTGC      TTTTCCAGTGTCGGC  59 134
 SCL_RS08815 1834005 .. 1834031 +  -2.8  -4.56597   GACGGGTGATTACCC         ACCCGACGCCCA GAA TGTGCGTTGGCA         TTTTTGCAAAGCGAG  67 216
 SCL_RS08820 NONE
 SCL_RS08825 1836445 .. 1836456 +    -3  -3.27298   GCGTCACCCTTGATA                TCAA TATT TTGA                 TTCCTGATTACGGAG  45 133
 SCL_RS08830 1837313 .. 1837352 + -15.6  -3.01416   ATTGAAGATGCCGAT  GGCGCCGGTGGTCGCCCC GGCC GGGATGGTCACCTGCGCC   TGTGTGTCGCTGATG  81 285
         cls 1843632 .. 1843666 +  -8.4  -4.28774   TGTAGCCGGGTCCGG     CGGGCGAGGTTCAGGC CCG GCCTGCCTCTCGCGTG     TTTTGGCTTAGATAC  81 36
 SCL_RS08900 1850445 .. 1850484 +  -7.9  -2.63079   CACCGAAAAGTGTTC  GGTAT-CAGCGGCGCA CTTGAATCA TGCGCCGCTGCAAGCC  TCGCTTGTCTGCGCC  54 53
 SCL_RS08920 NONE
 SCL_RS08925 NONE
 SCL_RS08930 NONE
 SCL_RS08935 1860847 .. 1860860 +  -2.4  -4.26076   TTCTCGGCGCCGTCA               TCAG CCATTT CTGA                TTTTCATGCCGGTCC  60 12
 SCL_RS08940 1862336 .. 1862360 +    -2  -2.78463   GCGCGAATCTTTCGA          TCGCACTCCG GATGG CGGAGCCTGA          TCTCATGACGCCCGT  39 1
 SCL_RS08945 NONE
 SCL_RS08950 NONE
 SCL_RS08955 NONE
 SCL_RS08960 NONE
 SCL_RS08965 NONE
 SCL_RS08970 1869791 .. 1869813 +  -4.6  -3.05816   ATTTCTTGTCGCAGG           CATGGCCGGC CTC GCCGGACTCG           TTGCATGGCGCCTCA  47 59
 SCL_RS08975 1870417 .. 1870433 +  -7.2  -4.71776   AATCGGGGAGCTTGC              CGGGCT CGGCC GGCCCG              TTTTCTTGCCTGTTG  86 240
 SCL_RS09030 NONE
 SCL_RS09035 1885201 .. 1885234 +  -9.5  -2.62396   TTTGTGGTTAGAATA     GGTGCGCTCCAGGAT CAAA ATCCTGGCACGGACC      TGGTCTCCGCGAATA  63 341
 SCL_RS09040 1894282 .. 1894307 +  -2.6  -3.92324   ATTGACCCAAATCAA         TGTCACGCCTG TGAAT CAGGTG-GATA         TTTAATATTCGCCCG  54 131
 SCL_RS09045 1895395 .. 1895405 +  -2.4   -3.1247   CGCGCATTCACAGAA                 TGGC CAT GCCC                 TTGACTGTCCACGAT  42 298
 SCL_RS09050 NONE
 SCL_RS09055 NONE
 SCL_RS09060 NONE
 SCL_RS09070 1900795 .. 1900805 +  -2.4   -4.7497   GATCGCCACCATGGC                 GCCC ACA GGTC                 TTTTTCCTGGATCGA  68 226
 SCL_RS09075 NONE
 SCL_RS09080 NONE
 SCL_RS09085 NONE
 SCL_RS09090 1902213 .. 1902234 + -13.7  -3.36694   CGAGTGACGCGCAGA           CCGTCCGGA GCAG TCCGGGCGG            TGTTTGCGACTCCGT  88 65
 SCL_RS09095 1904425 .. 1904465 +  -2.3  -3.86897   AGCTTGCGCGCCGGC  CCGGTGAGGGACATGAGGA TGT TCGGCTTCTCCACCACCGG  TTTCTGGAAGCTGCC  54 156
 SCL_RS09110 NONE
 SCL_RS09115 NONE
 SCL_RS09120 1912554 .. 1912569 + -11.8  -4.08546   GACCCAAAATACAAA              GGGCCC GCAA GGGCCC               TTTGTCATTCCTCGT  91 39
        gloB 1919031 .. 1919049 +  -3.9  -2.95521   AGCGGAGGGTATTGT            TTCGG-AC AAGA GTACCGAA             TCTGGTTACTCTCGC  44 40
 SCL_RS09170 1920706 .. 1920742 + -15.2  -3.18735   AATTGGAAACCTTCC    GTCCGTTCGTGGTTCG ACAAG CTCACCACGAACGGAC    TTAATCAGATCTTCC  95 125
 SCL_RS09195 1928372 .. 1928393 +  -7.3  -2.66216   AATGGAAAGACAAGG           CATCCGC AGATGAGC GCGGATG            ATTATGATGATAAAC  54 45
 SCL_RS09265 NONE
 SCL_RS09270 NONE
 SCL_RS09275 NONE
 SCL_RS09280 NONE
 SCL_RS09285 1943010 .. 1943068 +  -2.7  -4.29845   TATAAACAGTGAAAA GTGTAAAGTGCAAAGTGAATAGT GTTTTGTCATTCA ACTTTTCACTTTTCATTTTTCAC TTTTAACTTGCGTTA  62 36
 SCL_RS09290 1943581 .. 1943591 +  -3.2  -3.77553   AACCGCGAATGAGAC                 GTCT GAC AGGC                 TTGTTGCTGATATTC  54 29
 SCL_RS09295 1944277 .. 1944293 + -15.1  -5.45652   ACAAAAAACAAAAAA              GGCGGGC CAA GCCCGCC              TTTTTTGTTACGAAT 100 45
 SCL_RS09325 NONE
 SCL_RS09330 1953248 .. 1953284 + -18.1  -2.75535   TTTTCAACTTTTTCA    TGTAGGTTGGGGTGAGC GAA GCGAACCCCAACCTACA    TGATTGCGATATTCA  95 98
 SCL_RS09360 1958589 .. 1958602 +  -4.5  -3.14693   CGAGAAGGCCGGGTA               TCGTG TCAC CGCGA                TCTATTAATACTGAA  47 4
 SCL_RS09365 1959883 .. 1959908 + -14.7  -3.28924   TCTCACCCTCTCCCC         CGCCCTCTCCC TCAA GGGAGAGGGGG          TTATGAGGCAAAATC  95 196
 SCL_RS09370 1961093 .. 1961117 +  -7.8  -3.28791   GTTAATCCTGAAACA         GAACGCGGGCC GCAA GGCCCG-GATC          TTGTAAAACGGAGGT  59 175
 SCL_RS09375 1961628 .. 1961657 + -20.1  -3.56821   CATCCGTTGGTTGTT       CGACAACCCCGCC GAGA GGCGGGGTTGTTG        TTTGGGGGATGTCAT 100 55
 SCL_RS09380 1965829 .. 1965844 +  -3.2  -3.14132   GAGTCTGCCACAATG              GCTATC CCTG GATCGC               TTCATGCGCCCGCAC  43 241
 SCL_RS09385 NONE
 SCL_RS09405 1971022 .. 1971054 + -27.9  -3.08798   TTCGCCAAACATCAT      TCCCCTCTCCCCCAC GTT GTGGGGGAGAGGGGA      TCTTCGATGCGAACT 100 129
 SCL_RS09410 NONE
 SCL_RS09415 1973790 .. 1973811 + -14.5  -5.40072   CAGGTTGTCAAAAAA           TATGCCCGC GCAA GCGGGCATA            TTTTTTTCAGGGAAC 100 50
 SCL_RS09430 1976972 .. 1977002 + -10.5  -3.10958   GGCCCAACGATAGAA      C-TCAGCCG-CGCGG TTT CTGCGTCGGCTGAAG      TGATTTGTTAGGCTC  69 511
 SCL_RS09470 1982453 .. 1982463 +  -3.2  -4.07568   GTATGGCGTGCAGAT                 TGCG CGA TGCA                 TTTTCAAGCCGGAAC  58 69
 SCL_RS09485 1985234 .. 1985256 +  -6.2  -3.75707   GCGTCGGCGTGGCGG           TCCATGGGTC GTC GGGCCATGGG           TGTTTTGGATATTTC  60 203
 SCL_RS09495 1989193 .. 1989204 +  -7.2  -3.40611   TGCGCACCTCGACGC                CCGC CAGC GCGG                 TGTTCTTGCCGTCGC  60 478
 SCL_RS09525 NONE
 SCL_RS09530 NONE
 SCL_RS09535 1998636 .. 1998660 +  -4.1  -5.40474   TAATCCGGCGTACCG          TCGGCAACCAC GCA GTTGCGGCCGA          TTTTTTTGGCGCGAT  86 69
 SCL_RS09590 2010916 .. 2010926 +  -4.6  -3.06261   AATAGCTTTTCCCGG                 CGTC CTT GGCG                 TCTTGGCGGTTCAAA  47 487
 SCL_RS09630 NONE
 SCL_RS09635 2020596 .. 2020617 +  -4.3  -2.76404   ACAACCGGCCAGAAG           GGCGATGTC CCGT GACGCTGCC            TGAATTTTCCATCAA  45 11
 SCL_RS09640 NONE
 SCL_RS09645 NONE
 SCL_RS09650 NONE
 SCL_RS09655 NONE
 SCL_RS09660 2027672 .. 2027686 +    -7  -2.55544   CCCGTAGACAGCGTC               CGCGCC ACT GGCACG               TCCATTGCATCCTAC  51 34
 SCL_RS09665 2028004 .. 2028042 +  -5.3  -2.90496   GCACGCTCTGACCTT  GTTTCACGGCAGCGATCCG CCC CGGGTCGCACCCG--AAAC  TGCTTTACGCCCACA  49 30
 SCL_RS09670 2028350 .. 2028375 + -20.5  -3.99374   TTCCTGAATAAAAAA         CGCCGGCGCAT TCGC ATGCGCCGGCG          TTGTTGTTGCTGCCG 100 53
 SCL_RS09685 2031581 .. 2031597 + -10.8  -5.68438   TTTAAAGTTTTACGA              CCCGGC CAAGC GCCGGG              TTTTTTATTTCATGG 100 56
 SCL_RS09695 NONE
 SCL_RS09700 NONE
 SCL_RS09705 2035163 .. 2035177 +  -5.6  -2.56449   CGGCGCGGCGCTGAC               CCGGTA TTT TCCCGG               CTGTTCTGGTAAAAT  46 27
 SCL_RS09710 2036947 .. 2036965 +  -5.3  -4.25104   TCTTGATGGCGCCGG             TTTTCCG CCATC CGGAGAA             TTTTCATCACACACA  69 325
 SCL_RS09715 NONE
 SCL_RS09720 NONE
 SCL_RS09725 2039203 .. 2039215 +  -3.3  -4.07568   CAAAAACGGGAGGCT                GATGC ATT GCTTC                TTTTCAAAAACGAAG  58 391
 SCL_RS09740 2040894 .. 2040916 +  -5.5  -3.64703   CGATGTCGAGCCACA           GCCCCTGTT CGTCC GACAGCGGC           TTTACCTCGGCCAGA  57 92
 SCL_RS09750 2043651 .. 2043662 +  -5.8  -3.74224   CCTGCGTGAGGTTCG                CCAC CGCC GTGG                 TTTCGGTGATTTCAA  60 430
 SCL_RS09780 2052314 .. 2052324 +  -4.6  -6.17184   GGATTCCGGAAAGCG                 CCGG ATT CTGG                 TTTTTTTTTCATAAT 100 466
 SCL_RS09790 2052976 .. 2052994 +    -3  -3.83026   TCCGGCCCGGGTTCT             GGCGCTCA CCC TGACCGCG             TTTGATGTACCCCAA  54 287
        otsB NONE
 SCL_RS09815 NONE
 SCL_RS09820 NONE
 SCL_RS09825 2062472 .. 2062482 +  -5.4  -3.73068   GTGACCTCTGTGTGC                 TCTG TGG CAGA                 TTATTAAGTTACCCG  58 106
 SCL_RS09840 2064631 .. 2064642 +  -2.2  -3.92592   GCGCAGGCACCGGAG                GCAG CATG TTGC                 TTTACTGTTCCACAT  54 227
 SCL_RS09845 2067829 .. 2067855 + -15.3  -3.36515   CGGGGCGCTCGCCGG         GACGAAGACAC GTTAA GTGTCTTCGTC         TGTTTCCGGCTCGCC  95 209
 SCL_RS09860 2071157 .. 2071173 +  -4.4  -2.95166   CTACATTAAATATTG              TTGAGC ATTGC GCTCGA              ATATTTTTGCACTAG  46 52
 SCL_RS09865 NONE
 SCL_RS09870 NONE
 SCL_RS09875 NONE
 SCL_RS09880 2076708 .. 2076735 +  -6.3  -3.92324   CATCCAGGCGCTTCA        CCGGATCGT-TC GCGGG GATACGTTCCGG        TTTGATGTTCAGACG  65 349
 SCL_RS09890 2079023 .. 2079037 +  -5.7  -4.25283   CCTTGTCGCCCACCT               TGACG TCACC CGTCA               TTTTGGTGCCGGCAT  71 204
 SCL_RS09900 NONE
 SCL_RS09905 2081937 .. 2081959 +    -4  -3.72576   CTGGTGGCGGTGCAG           GTGCCGGTAA ACT TTCGCGGCGC           TTTCCTGCCACGAAA  56 423
 SCL_RS09925 2084516 .. 2084536 +  -9.6  -4.07885   ATGGCCGCCGCGCTT            GGCCAGCC CCGGC GGCAGGCC            TTTTCCGCCGCGGTA  76 273
 SCL_RS09950 NONE
 SCL_RS09955 2091661 .. 2091709 + -19.6  -4.08216   AGTAGGGTGTGCTGA GCGTCAGCGAAGCGCACCGATAG AAGC CTAACGGTGCGCAACGCTG-CGC TTTTGCGCACCCTAC 100 79
 SCL_RS09960 2092694 .. 2092708 + -12.8  -5.65496   CTTAAATGACCAAAA               GCCGCC TCT GGCGGC               TTTTTCTTTTTCGTC 100 99
 SCL_RS09995 2100609 .. 2100632 +  -3.8  -4.23615   CCACCACCTCCACCA          CCAGCATCTTG TCG CGCG-TGCTGG          TTTCTTCCATGTGAT  63 368
 SCL_RS10010 2104665 .. 2104723 + -15.6   -3.0161   AATATCAATCGCATG ---GCGCGTGGTACGCGCCCTACGT-TAGC CAA GCGAGATGTAGGGCGCGTACCACGCGCCGA ATTATTATTCTGACT  93 42
 SCL_RS10070 2117112 .. 2117126 +  -9.2  -2.71712   CGGCCCGGCCTGATC               CGGGCT ACC GGCCCG               CTTTACACCAGAAAA  60 28
 SCL_RS10080 2118979 .. 2119006 + -17.2  -4.08216   TCAGGAACACCAAAA        CAAAAAAGCCCC ATAC GGGGCTTTTTTG         TTTTGCGCCGCATCG 100 51
 SCL_RS10190 2140824 .. 2140839 +  -6.8  -4.14739   CCAAAAACCACGCGG              CCGTCG GCGT TGACGG               TTTTGGGGTCGATGA  69 263
 SCL_RS10215 NONE
 SCL_RS10290 NONE
 SCL_RS10295 NONE
 SCL_RS10300 NONE
 SCL_RS10305 2165822 .. 2165839 + -11.3  -3.49584   AACATCCGCGCACGC             GCCTTGC GTGA GCAAGGC              TTCATCTCTTTTTGA  77 64
 SCL_RS10310 NONE
 SCL_RS10315 NONE
 SCL_RS10320 2169011 .. 2169035 + -12.9   -3.4149   GCACCCGTTCAGCGG          GGAAAAGGTCC ACC GGACCATTTCC          TGTTTCCGCTTCACT  84 106
 SCL_RS10330 2170174 .. 2170207 +  -5.8  -3.53761   GGAGGCTAGTCGCGC     CCCGGAGCTAGTCG CGTTTA CGGCCGGTACCGGG      TTTCGCGCGGCGTTC  57 32
        smpB 2172985 .. 2173012 +  -8.4  -2.87683   GACCTGGAAATGCGG        CGCGCGCTCA AAAACCGC TGAGGGCGCG         TCTATGCCACGGTCT  59 5
        ssrA 2180967 .. 2181003 +   -19  -4.75472   CGCCACCTCCACCAG   CAAGAAACCCCTGACCG GCAA CGGTCAGGGGTTT-TTG    TTTTATTGGTCTAAC 100 351
 SCL_RS10405 NONE
 SCL_RS10410 NONE
 SCL_RS10415 NONE
 SCL_RS10420 2187675 .. 2187698 +  -4.6   -5.0538   GCTGATACCCGCCGC          G-TTCCTCTTC CGT GACGAGGAATC          TTTTTTGACCTGCCG  80 97
 SCL_RS10470 2197036 .. 2197047 +  -4.4  -4.67982   GACTGAAAATTTAAC                GACA AATC TGTC                 TTTTCTTGACTGCGG  71 140
 SCL_RS10475 NONE
 SCL_RS10480 2199520 .. 2199545 +  -5.3  -3.91946   AACCGCCGTCGCCGG         CCGT-CGGAGCG GTT CGCGGCGCACGG         TTTCCATTGTTTATT  61 75
 SCL_RS10490 NONE
 SCL_RS10495 2202494 .. 2202513 + -16.4  -5.82316   GTGGATGAAACGAAA            CGGGCGGC CTTG GCCGCCCG             TTTTTTTTGCCTGGT 100 51
 SCL_RS10535 NONE
        hypB 2211079 .. 2211100 +  -3.7  -2.79501   CCCCGCTTGTTCCAG           TTGTCATCC ATGA GGAGGATAA            TATGATCACCATGTC  43 47
 SCL_RS10545 NONE
        hypF 2213936 .. 2213993 +  -2.7  -3.78022   GGTTTAGGGTTTAAA GTACTGAGTTCAGGGCACAGAGTTG CCGGTCTC TGACTTTGTACCTTGCACTCTGCAC TTTCATCCCTGTGAC  54 34
        hypE 2219977 .. 2219990 +  -8.1  -2.78384   CGAACTGGAGGATGA               TCCGC TGCC GCGGA                TCTGCTGACGCGCCG  57 4
 SCL_RS10630 NONE
 SCL_RS10635 2232008 .. 2232042 +  -7.9  -3.24422   CTTTCTGCTTCATCG     GACACCTCCGGTTAA CTGCC TTAGGGGGAGGTGTC     TACTTTTTCAGGGTA  59 176
 SCL_RS10685 2239631 .. 2239645 +  -5.7  -5.00616   GACGTCGCTCAGCAA               TACCG TGCAT CGGTA               TTTTTTCCCGGCCGA  85 286
 SCL_RS10810 2259106 .. 2259125 + -16.4  -3.66178   AAAGAAAAGAACAAA            GGGCCCGC GCGA GCGGGCCC             TTTGCGGTTGGCACA 100 422
 SCL_RS10840 NONE
 SCL_RS10845 2265910 .. 2265922 +  -4.7  -3.28712   CAGGCGCGCGCTGCG                GCCGC TGA GCAGC                TTGTCCCACAGCAAC  50 322
 SCL_RS10865 NONE
 SCL_RS10870 NONE
        lptC NONE
        lptA NONE
        lptB 2272537 .. 2272552 +  -3.2  -3.53012   AAAAAGGTTTACCTG              GGCGAG GACT TTCGTC               TTTGAGACGGGCAGC  49 5
 SCL_RS10890 2274205 .. 2274221 +  -9.4  -2.86164   CATCCCGCCTTCCAA              CCAGCG CAAGT CGCTGG              TGTAATCCTTCCGGC  62 4
 SCL_RS10895 NONE
 SCL_RS10900 2276386 .. 2276398 +  -2.6  -2.53715   CGGGAACTGAAATAG                CCGG CATGA TCGG                ATTACTCATACTCGC  38 26
 SCL_RS10905 NONE
 SCL_RS10910 NONE
        ptsP 2278832 .. 2278848 + -10.8  -3.40403   GGGTGGAAAAACAAA              GCCGGC ATTGA GCCGGC              TTGTCGTGAGGCAGG  73 15
 SCL_RS10960 2290000 .. 2290012 +  -9.1  -3.15544   CATCGTATTAACCGG                CACCG CCA CGGTG                TTGCTGGGGCTGGGC  63 359
        soxX NONE
        soxY NONE
        soxZ NONE
        soxA 2292224 .. 2292255 + -13.8  -4.11216   AAAATCCGGATGTAC      GGAAACCCGGCG CGCTGTAA CGCCGGGTTTTC       TTTTCCGGCTGCCGG 100 42
        soxB 2294133 .. 2294145 +  -4.7   -2.5805   GCCGACAGCGCGGCG                AGCGG TAT CCGCG                ATTGTCCCGGCTAAT  44 57
 SCL_RS10990 2295206 .. 2295242 + -10.1  -3.37299   TTCGCGCCTTCCCGA    CAGTGAAATTCGCGCCG TTT TGGCGCGAAACTTGCTG    TATCTTTATGATATG  70 45
 SCL_RS10995 2296543 .. 2296569 +   -15  -2.90982   TCGGCGCCTGATCGC         CACGGGCGCGCC CGG GGCGCGCCCGCA         TGTGTAAAGATTTAT  86 30
 SCL_RS11000 NONE
 SCL_RS11005 2297961 .. 2297972 +  -5.8  -3.31792   AGCGTCAGGTGCGCC                GCGT AGGG ACGC                 TTCTCCGCATCATAG  52 175
 SCL_RS11025 2300500 .. 2300522 +  -3.2  -4.07885   ACAGGATGACATCGC           CCGGCTGCGC CAC GCGCAGGCAA           TTTTCCAGCGAGCTG  58 299
 SCL_RS11140 2317242 .. 2317272 + -24.2  -3.06796   AGGGTATAACGGATT       CGGGACAACGATCC GGT GGATCGTTGTCCCG       TTAACTCGCCTGGAC 100 113
 SCL_RS11150 2318526 .. 2318557 +  -2.8  -4.37527   CGATCTCGGCCAGGC      GCCCGAAAAACACC ACGC GGTGCCATTCGGTC       TTTTCCTGCTTCTCG  64 373
 SCL_RS11165 2323426 .. 2323444 +    -3  -3.53563   TCGATGCCATGCCCC             TGCGCGTG GTC CACGCCGA             TTTCGCGCAACATCT  49 130
 SCL_RS11415 2363703 .. 2363758 + -10.3  -3.53012   ACATGGCAAGTATAA CCGCCCGCGGCGGTGCAGCCCACTCAGC CCG GC-GCGTTGTC-GCGCAGCC-CGGGCGG TTTGGCCGGCGGCGG  74 523
         efp NONE
 SCL_RS11490 2378754 .. 2378765 +  -7.2   -4.2349   GCGGGCGTGAAGCTC                GGGC GCAT GCCC                 TTTTCGGTGTCGGCG  72 332
 SCL_RS11500 2379676 .. 2379711 +  -6.7  -3.78775   GCCGGGTTCAGGCTG    CCACGCCGGCCACCGA CAGCA TCGGCG-CCGCCGCGG    TTTGATCGTCAAACC  65 48
 SCL_RS11540 NONE
 SCL_RS11545 2390715 .. 2390730 + -11.8  -4.67755   GGCAGAAACGAAAAA              GGGCCC TTGC GGGCCC               TTTTTGCGTGCGTCT 100 48
 SCL_RS11595 2398696 .. 2398716 +  -2.5  -3.80573   AAAAACAGCTCAAGA            CTTGAAGCT TCA GGCTCTAAG            TTTGATACTCATGCC  52 21
 SCL_RS11600 2399707 .. 2399723 +  -6.5  -2.75481   GGTCCGCGTAAAACC              GCTCGCA GGC TTCGAGC              TCCTTCACGTTCAGC  49 356
 SCL_RS11655 2408644 .. 2408679 +  -6.1   -3.6849   TAAATCAGGGACAAA    GGCGGGGG-CTGGACG CCGGA CTTCCAGGCTTCTGCC    TTCTTCACGTTACCT  60 134
 SCL_RS11660 2409133 .. 2409151 + -13.8  -5.28778   ATGAGTAGCAAAAAA             CGGGGCCG CGA TGGCCCCG             TTTTTTATGCGTCGT 100 48
 SCL_RS11690 2416691 .. 2416703 + -10.5  -3.40843   CCGCCCGGCCTGGCC                GGCGG TTG CCGCC                TCTTTGGCGGTTTTA  68 522
 SCL_RS11705 2419532 .. 2419551 +  -8.5  -3.87815   TACTGCTTGTCGTAG            CTCGGCG GGTTGG CGCCGGG             TTTGTAGGAATCCGC  71 397
 SCL_RS11780 2435171 .. 2435183 +  -4.7  -2.74415   CCGCCGGTCCGTCTC                CCCCG CCC CGAGG                CTTGATTTCGTGCTC  45 52
 SCL_RS11785 2436837 .. 2436877 +    -9  -3.34344   GGCCCGGAAGCTATC CCCGGAATGGGGCGTGCAAG CGG CTTGC-CGTGCC-TGCCGGG TTCATTGACCCGTCG  66 260
 SCL_RS11790 NONE
 SCL_RS11795 NONE
 SCL_RS11800 NONE
 SCL_RS11805 NONE
 SCL_RS11810 NONE
 SCL_RS11815 NONE
 SCL_RS11820 NONE
 SCL_RS11825 2440493 .. 2440505 +  -3.3  -3.08046   GTGCGCCCCCTGGAC                CCGAC GAT GTAGG                CTTTTACCGTGGACG  43 14
 SCL_RS11830 NONE
 SCL_RS11835 NONE
 SCL_RS11840 NONE
 SCL_RS11845 2443843 .. 2443860 + -14.1  -3.16683   GCCGCAAAAAAAGAA             GGGCGGC CGGG GCCGCCC              TTCGTCAGATGGCAT  95 78
 SCL_RS11865 2449559 .. 2449595 +  -7.2  -3.03124   GCGGGTATCGGCGTC   TGCG-GCCGCGTGGGTCG CGG CCACCT-CGCGGCGCGCC   TGTTCGGCGATCGAC  54 271
 SCL_RS11915 2459002 .. 2459037 +  -5.4  -2.65521   GGGCCAGCAACACGA    TGGACGTGGAGACGC CGAGCAT GCGCCAC-ACGTCCA    GTTCCTTCATGTCGA  43 138
 SCL_RS11955 2468606 .. 2468650 +  -4.9  -3.40052   AGTCCGTCATGGTGA GCGCCAG-ATCTGCGGC-CGG ATTGA CCGTGGTGCTGACACTGGCGC TGTTGTTGGCGATGT  53 397
 SCL_RS12010 NONE
        gshA NONE
 SCL_RS12055 2496455 .. 2496476 +  -6.5  -2.94356   GGAAAAATCTCTGCG           TTCTCCGCG TCTC TGCGGCGAA            TAATATTATTTTGAA  53 111
 SCL_RS12060 2497415 .. 2497427 +  -9.1  -2.65264   ATCTTGAGTTCAACG                TCCGG CTG CCGGA                TACTGTCCGTCATGA  59 46
 SCL_RS12065 NONE
 SCL_RS12070 NONE
 SCL_RS12075 NONE
        pyrB NONE
 SCL_RS12085 2501247 .. 2501274 + -17.2  -3.58522   GGCCGGGTGTCACGA        CAAAAAAGCCCC TCGC GGGGCTTTTTTG         TTTCAGGGTCCTGGT 100 43
 SCL_RS12100 NONE
 SCL_RS12105 NONE
 SCL_RS12110 2505447 .. 2505457 +  -8.2  -3.53224   CCACCCTCTCAGCCC                 CCGC CCA GCGG                 TTTCGGGCCGGCCTG  65 67
 SCL_RS12115 2507570 .. 2507603 + -15.3  -3.91897   GCACTACAGAAAATA     AAAAGGCCGGAAGGG TCGC CCCTTCCGGCCTTGA      TTTATCCGTCAACGA 100 83
 SCL_RS12130 NONE
        grxC NONE
 SCL_RS12150 2513909 .. 2513922 +  -8.1  -3.53563   CTGAAACGGGAGGAT               CGGCA TGAT TGCCG                TTTCCCGCAACATCT  65 55
 SCL_RS12155 2514502 .. 2514551 +  -5.1  -3.35278   GAAACCACAGATAAA CACAGATGAACGCGGATAAAAAA GAGA TTATTTGTCAGTGTTAATCCGTG TTCATCTGTGGTTCC  53 72
 SCL_RS12170 2517255 .. 2517291 +  -8.7  -4.07568   TGATGGCGCGCGATC   TCCTGC-CACGGGTCG AAGGCG CGGTCCGTGAGCCGGA    TTTTCACCACCCACC  73 485
         sat NONE
        aprB 2519628 .. 2519641 +  -2.3  -3.27022   AAGACGGATCGCAGC               CAGCT GGTA AGCGG                TTAATCTCAACTAAC  43 8
        aprA 2521668 .. 2521691 + -12.4  -4.32857   AACGCAGCAAATGAA          GGGGTCCAGGG AAA CCC-GGGCCCC          TTTGTCTTTAGCGAG  93 50
 SCL_RS12200 2522841 .. 2522851 +  -5.4   -3.1247   GATAGACTATGATCC                 TGGT TGA ACCA                 TTCCATGTCGCCAAT  50 196
 SCL_RS12205 2524540 .. 2524561 + -17.3  -3.17194   TGTATGCAAAAAAAA           GACCCCGCC TTTC GGCGGGGTC            TTCACTTCAGAACCT 100 132
 SCL_RS12215 2525676 .. 2525703 + -15.6  -5.45802   CGTGAGCGGTCTACG        CCCCATTCTCGC TGTC GCGGGGATGGGG         TTTTTCTTTTCCCCC 100 59
 SCL_RS12220 2526288 .. 2526313 + -19.1  -5.15634   ACGGGGGATGTGTAC         CCCATTCCCCG CATG CGGGGAATGGG          TTTTTTCCTGCCCTG 100 86
 SCL_RS12225 2527091 .. 2527107 + -15.1  -5.63517   GGCATGAAGCCAAAA              GCCGCCC GAT GGGCGGC              TTTTTTGTTTCCGGC 100 60
        msrA 2527925 .. 2527937 +  -3.3  -3.78934   TTTTCAGGAACTGCC                CATGG AAG CCCTG                TTGTTCTCCACCGCG  54 129
 SCL_RS12235 2528710 .. 2528737 +    -2  -2.61144   TCACGGGTGCGGAGT        TTGAGCTTGCCGA GAT TCGGT-GGATCAA        GTATTTCAACGGTGA  38 243
 SCL_RS12245 2529988 .. 2530012 +  -9.9  -4.25104   CTTCTCGACCATGAG          CGTGGCCGCCT CGC GGGCGGACATG          TTTTCATCCAGCAGC  85 357
 SCL_RS12255 2531324 .. 2531351 +  -8.4  -3.06183   CAAAAACGAAGCGTT        GCGCACCGTT TGGCATAT ATCGGTGCGC         TTCGCTAACGCTCAG  60 52
 SCL_RS12285 2540218 .. 2540252 + -10.9  -3.87075   GGCTGAACCGGGGGA    TCACAGTTTCTGGTCG ATAT CGG-CGGAAACTGTGA     TTTATCCCGACTCCT  80 75
 SCL_RS12335 NONE
 SCL_RS12340 2549946 .. 2549961 +  -4.7  -3.18582   GAAATGTTACCTGGT              GAGCT CGGTAT AGCTC               TTCATGGATCGGATA  49 402
 SCL_RS12345 2550485 .. 2550502 +  -3.3  -3.83026   CGAGATTGTCTGGAT             GCCTTTG TAAC CCAGGGC              TTTGCTCTCAAAAGG  54 16
 SCL_RS12350 2551232 .. 2551258 +    -8  -4.63218   TCAATAATCTGATTT         TGTAAAGCGCAT GAT ACGCGCCTTACA         TTTTATTGCGCGGAC  87 160
 SCL_RS12395 NONE
        ccoS NONE
 SCL_RS12405 2562519 .. 2562576 +  -7.6  -3.53091   CGAGGAAACGCTGGA TGCGGCGCTGCTCGCGGCGGCTGACCT CGATA ACGT-AGCTGCCGCGGCCGGTACAGCA TTTGCCGCAGCCAGT  60 332
 SCL_RS12420 2564669 .. 2564686 +  -4.8  -2.84732   CGCCGACGAGATTGT             GCGG-CG CGCCA CGACCGC             TCTCATACATTTGCG  46 202
 SCL_RS12450 NONE
 SCL_RS12455 NONE
 SCL_RS12460 NONE
 SCL_RS12465 NONE
 SCL_RS12470 2578157 .. 2578171 +  -2.7  -5.06414   TCTGAGCCGGCGCTG               GCGCG ATCCC CGCGG               TTTTTGTTAACCGGC  76 36
 SCL_RS12475 NONE
 SCL_RS12480 2581730 .. 2581746 +  -9.4  -4.74103   CCGAATCCATGAAAA              GACGGC TGCGC GCCGTC              TTTTTCCATTGGCAA  93 412
 SCL_RS12495 2586201 .. 2586257 +  -4.7  -2.81872   GCCGCTCCTCGGGCT TCCGGCGCGCCCTAGTGCGTCCCCGGC TTC GTCAGTGGCGCGCCCCGGCACCCTGGA TCGTGTTATCCTAGC  45 11
 SCL_RS12500 2587731 .. 2587743 +  -2.6  -3.38224   GCAATTCTTTTTCTT                TGCG TCCTT CGCG                TCTTTGCGGTGAAAT  45 104
        pdxA NONE
 SCL_RS12510 2590070 .. 2590083 +  -2.4  -2.52543   TTACCCTAATATATC               CAAC CCTAAC GTTG                TGGATTACCCCGGAT  38 481
 SCL_RS12515 2590567 .. 2590603 + -28.3  -4.10657   CTGCTCGGACTAAAA    CGGGACGGAGGGATTAA ACT TTAATCCCTCCGTCCCG    TTTTAGGACCTCTCC 100 45
 SCL_RS12550 NONE
 SCL_RS12555 NONE
 SCL_RS12560 2599292 .. 2599308 +  -5.1  -3.27525   GAGCTCAATTTTTAG              CTGTGCT CGC AGCACAC              TTACCTTTCCCAGGA  52 188
        glnA 2600772 .. 2600798 + -18.8  -4.56597   TGTGAGGTAAACCCG         CAATCGCCCCCG CAC TGGGGGCGATTG         TTTTTGGGGGCCGGA 100 53
 SCL_RS12570 NONE
        ntrC 2603493 .. 2603505 +  -7.7  -3.14132   GTTCGGCGGCACGAA                GGTTC ACT GAACC                TTCGTGAAAACCCCG  57 120
 SCL_RS12590 NONE
 SCL_RS12595 2608139 .. 2608177 + -23.2  -3.33815   GGGACATTTCACAAC   CAACCGTACCACCGCGGC CGT GCCGCGGTGGTACGGTCC   TTCATTCAGGCCGGT 100 49
 SCL_RS12640 NONE
 SCL_RS12645 2616979 .. 2617005 + -15.3  -3.36515   CGGGGCGCTCGCCGG         GACGAAGACAC GTTAA GTGTCTTCGTC         TGTTTCCGGCTCGCC  95 306
 SCL_RS12655 NONE
 SCL_RS12660 2618259 .. 2618278 +    -7  -2.79023   GGTATATAGTTGAAG            TGCGCCCC CTGC GGTGCGCG             TGATTGCTCCAGTTA  52 40
        ssrS NONE
 SCL_RS12670 2619043 .. 2619054 +  -5.8   -3.4214   CAAGGCGTCATCACG                GACC AGGC GGTC                 TATCTTTATTAGAGT  56 2
 SCL_RS12675 2619921 .. 2619931 +  -2.4  -2.57244   GCTTGACCGACAACT                 CAGC CGC GCCG                 TGAATTACTGGCTGA  38 35
 SCL_RS12680 NONE
 SCL_RS12685 2621022 .. 2621048 + -16.6  -3.02698   TCCAGGCTGTAAATA         ACAAAGCCGCCC TCC GGGCGGCTTTGC         ATTTGTGTCGCCTGC 100 65
 SCL_RS12695 2623581 .. 2623615 +  -4.8  -2.52676   AACTCACGTAGGTGT     TGTTGGGGTTTGGCAC TGT GCGCTTCACCCCAACC     TACATTAAGCGAGTG  43 30
 SCL_RS12715 2629985 .. 2630012 + -15.6  -3.86346   AGTTTTTGAGCTGCA        CCAAAGCGCCCC GAAA GGGGCGCTTTGC         TTTGTAAGCCGCTAC 100 49
 SCL_RS12735 NONE
 SCL_RS12740 2634719 .. 2634751 +  -4.3  -4.98531   CTGGCAAACCGCGTC     GGC-TTTGCGCGCAA AGTCC TTG-GCGTAAAAGCC     TTTTTGGTTTCGGGA  80 83
 SCL_RS12745 2635196 .. 2635223 +  -2.6  -3.08464   AAACCTCCCGACAAC        GTACCGGTTGAA CCGG TTCAGCCGGCGA         TTCGCTCAATCGTCC  42 15
 SCL_RS12755 NONE
 SCL_RS12760 2637877 .. 2637887 +  -5.4  -3.06302   TTACGTCTTGCGTCA                 GCTT CTC AAGC                 TTCGATACCACTGCT  47 197
 SCL_RS12785 NONE
 SCL_RS12790 NONE
 SCL_RS12795 NONE
 SCL_RS12800 2644208 .. 2644220 +  -7.7  -4.30987   AGCAGGTCGCGCCCT                TGCAG TAG CTGCA                TTTGTTCTCGGGGGT  76 365
 SCL_RS12810 NONE
 SCL_RS12815 2646456 .. 2646466 +  -2.4  -4.19238   CCGTGGCGTTGGTCG                 CACG CGG CGAG                 TTTTCGCCTTGCCCG  59 131
 SCL_RS12850 NONE
 SCL_RS12855 NONE
 SCL_RS12860 NONE
 SCL_RS12865 NONE
 SCL_RS12870 NONE
 SCL_RS12875 NONE
 SCL_RS12880 NONE
 SCL_RS12885 2661806 .. 2661822 +  -4.3  -3.07443   ATCAGGCTGGTGTGC              TGCGTCG CCG CCACGCG              TTGCATGCCGTATAC  45 491
 SCL_RS12895 2667067 .. 2667077 +  -8.2  -3.18264   TGACCTCCGCCAGCG                 GCCG CGG CGGC                 TTGCTGGATACACAG  58 432
 SCL_RS12905 2669396 .. 2669413 +  -2.5  -4.15044   CCGTCGGCATTATGG             CACGGCG CTTG CGCCCGG              TTTCTTGACCGGGAG  56 423
 SCL_RS12915 NONE
 SCL_RS12920 2670297 .. 2670319 +  -8.4  -3.01712   CATCAGCTTGATAGC           GTTTTCGCCC AGT GGGCGGAAAA           TCTTCACGCGCAGGC  57 86
 SCL_RS12930 2671854 .. 2671876 +  -4.1  -3.31322   TATGTTCACGCAGAA           TGAATCGCG ATTGA CGCCATTCG           TTCTGCGCGGTTCCA  49 46
 SCL_RS12935 2673708 .. 2673734 +  -2.1  -4.15632   GGGCCTGCACTATTT         GGCGGCCCG CTAACAACA CGGGCGGCG         TTTCTCTATACTGGT  56 114
 SCL_RS12940 2674261 .. 2674277 +  -3.6  -3.02745   CTGTCTCCCTGATCA              TCGGGG GGCGA TCCCGG              TCATTTATGGGTGAG  45 72
 SCL_RS12945 2675312 .. 2675344 + -11.3   -3.8125   TCCGCCAGCCCGGAG     CG-GCCCCGGGTGT TGCGCC ACACCCGCGGCACG      TGTTTTCATTACCGG  82 68
 SCL_RS12950 2676277 .. 2676307 +  -8.8  -2.78816   GGCATGCCACGAGTT       TCGCGCGGCGCATC TCA GCGGTGACGCGCGA       TGTCGTAGCCGATGA  54 345
 SCL_RS12965 2677804 .. 2677828 + -20.1   -5.4505   TTTCGTAAAAAAAAA          CGGCGGGTTCA GTA TGAACCCGCCG          TTTTTTATTCAACGA 100 41
 SCL_RS12985 NONE
 SCL_RS12990 2680971 .. 2680986 +  -7.5  -2.65766   GACCTGAAGCCAATG              CCGGC GTGCCG GCCGG               TCGTGTAGACTTTCC  54 34
 SCL_RS12995 2681947 .. 2681976 +   -12  -2.77523   GCGCCCTGCGCCGCG       GGCGGCCGCGGC GCCGCG GCCGCGACCTCC        TCATGTTGCTCGGCG  66 346
 SCL_RS13055 2690956 .. 2690975 + -10.7  -5.80817   AATCGGGATATTGCA            GACCCGG CAACGT CCGGGTC             TTTTTTTGTCTTGCG 100 95
 SCL_RS13060 2691779 .. 2691807 +  -3.8  -3.96216   CCCGGACCCGGGGCG        GGCTGAACGCAA TCGAC TGGCGTTCAATC        TTGTTTCCATCGCAA  58 50
 SCL_RS13080 NONE
 SCL_RS13085 2696098 .. 2696116 +  -3.8  -3.75657   CCACAAATCAGCGCC             GAAGTCCG CCT CGAATTTC             TTGTTGAATATTTCC  56 262
 SCL_RS13105 2699953 .. 2699970 + -14.1  -5.11836   CAAACCAAACACAAA             CGGCCCC GCGC GGGGCCG              TTTTGTTTTGAATCT 100 54
 SCL_RS13120 2704553 .. 2704582 + -22.3  -3.57971   TTGGCGCAGCTCCAA       CCAAAACGGCCCC GCGA GGGGCCGTTTTGG        TTTCAGCGTCCATGT 100 66
 SCL_RS13170 2712926 .. 2712936 +  -6.8  -3.86202   TTCAAGAAAAAAATC                 GAGC TTG GCTC                 TTTAATCTGATGACG  65 67
 SCL_RS13215 2723646 .. 2723656 +  -2.4  -4.43477   ACGCGCTCGAACCCG                 CCCG CTT CGTG                 TTTTGATTGAATAGA  62 9
 SCL_RS13220 NONE
 SCL_RS13225 2724815 .. 2724831 +  -2.9   -4.2558   TCAACCGCATGTTGG              CCGTG AGCGCGC CGCGG              TTTTCCTCCACCATC  64 262
 SCL_RS13240 2728083 .. 2728094 +    -3  -3.22475   CTTCCTCCACCAGCT                TGTT GAGA AACA                 TGTTGTGGGCGTGCG  44 285
 SCL_RS13280 2736292 .. 2736303 +  -7.2  -2.84013   GAAATAGATCAATTG                CCGG GCCG CCGG                 ATTTGCATATGATTA  55 100
 SCL_RS13285 2737146 .. 2737160 +  -8.6  -4.27843   TAGGCAGCTTCGGCA               TTCCTC TTC GAGGAA               TTATTTGTCTTTGAG  81 38
 SCL_RS13310 2743454 .. 2743467 +  -9.5  -3.10464   ATTCGTCGCCTTCGT               GCGGC TGGT GCCGC                TGTTCCCGTTCATCC  67 417
 SCL_RS13320 2744770 .. 2744780 +  -6.8  -3.36823   AATCGTGCGCGACAG                 CGAC CGG GTCG                 TTACGTTTTAGAGCG  58 4
        arsM 2745809 .. 2745825 +  -2.1  -5.06414   GTAACGGAAAGAAAG              GTCCTGG AAA CAAGGTC              TTTTTGTTGCCGCCG  74 61
 SCL_RS13330 2746563 .. 2746581 + -13.1  -4.10164   GCCGTTAATAAAAAA             GGCCCCG GATAA CGGGGCC             TTTCTGTGCTGATAC  95 52
 SCL_RS13360 NONE
 SCL_RS13365 NONE
 SCL_RS13370 2754959 .. 2754974 +  -5.4  -4.72272   GCCGAATTCCGGCGA              TCCTGT TTTT ACAGGG               TTTTTGCTGGACAAA  76 88
        aroQ NONE
        accB 2756015 .. 2756026 +  -4.4  -2.59564   CCGGTGGAATACGGC                GAAG CCCT CTTC                 ATTATCGAATAAACC  44 2
        accC 2757385 .. 2757432 +  -3.5  -2.89881   GCTTGGTCTCTGAAA CCCGTAAATCGTGAGTCG-TGA ACCGG TCAACGACTTGCGATTCACCAG TCTATGCCCTGGCTC  44 28
 SCL_RS13390 NONE
 SCL_RS13395 2759373 .. 2759386 +  -3.9  -3.61764   GCGTGCTCGATCCGG               GAATA TAAA TATTC                TTTCACCGTTCATCG  53 150
 SCL_RS13400 NONE
 SCL_RS13405 2760811 .. 2760823 +  -9.1  -3.15249   GTTCGGCGGTACGAA                CGTCC ACC GGACG                TTCGTGAAAAATCTC  63 130
        purH NONE
 SCL_RS13415 NONE
 SCL_RS13420 NONE
 SCL_RS13425 NONE
 SCL_RS13430 NONE
 SCL_RS13435 NONE
 SCL_RS13440 2767234 .. 2767262 + -10.9  -2.70932   CGGTGTTGAGCTTGT        CGCGCTCGGCCAG CAT CTCGTCGAGCTCG        TGCTTGCCGAGCACC  63 390
 SCL_RS13455 2769982 .. 2770012 +  -2.5  -4.56597   CGGACCGTGGGCGCG      GACCATGAGCGCCG TGAC CGCCGGTT-TGGTC       TTTTTGAAACGCGCA  68 136
 SCL_RS13465 NONE
 SCL_RS13470 NONE
 SCL_RS13475 NONE
 SCL_RS13480 2772304 .. 2772317 +  -3.9   -3.9009   TCTGATATTGATATT               TATCA AAAT TGATA                TTTATCAAATAAATT  56 36
 SCL_RS13485 2774790 .. 2774837 + -21.3  -3.17219   ATGTAGTCAAAGCAA AG-TCATGGCCCGGGGGCGCGG CGGTT CAGCGCCCCCGGGCCATGGTCG TTCATGGGCCTTGTC 100 67
         zwf NONE
 SCL_RS13495 2778919 .. 2778960 + -10.9  -4.55295   TGTTTGCGTTGTCGT TACTGCTCACGCCGCGA CACGTCCC TGGCGGCGTGACCGGTA  TTTCTTTCTCGAAGA  95 50
 SCL_RS13510 NONE
 SCL_RS13515 2783064 .. 2783084 +  -3.9  -3.72695   TCCAAGCGACGCGGC            CCGTGGC GGGGCTG GCAACGG            TTTAGTCACAAGGAT  53 48
 SCL_RS13520 NONE
 SCL_RS13525 NONE
 SCL_RS13530 2788099 .. 2788144 +  -3.2  -5.30616   AGCTCCTCGAAGCGG TTCTGGACGAAACCCAGCAG CTCTTC CTTCTCGGTGTCGTTCAGGC TTTTTCTTTGCATCA  85 431
 SCL_RS13545 2790353 .. 2790371 +  -5.3  -3.25946   GCAACACTGGACGAG             GATGGCA ACTGG TGCTATC             GTTTATTTGAAGTAC  52 57
         rho 2791823 .. 2791836 +  -6.7  -2.62246   GAAGCGCTAACGCGC               GGCTT GCCC AAGCC                CTTGATTGCGCTTAG  51 85
        rpmE NONE
 SCL_RS13560 NONE
 SCL_RS13565 NONE
 SCL_RS13570 NONE
         mdh NONE
 SCL_RS13580 2797968 .. 2797983 +  -4.6  -4.25104   GCGCGCCGGCACAGT              TCTCCG GCAT CGGTGA               TTTTGCTCACCGCCA  68 236
        hemH 2808157 .. 2808195 +  -9.5  -3.01712   GTGCTCAACGCGGTG   CCGGCGCCATGAGCG CTACCGCCC CGCCCGTGGTGCTGG   TGTTCGCCGGCAGCG  67 14
 SCL_RS13620 2809020 .. 2809036 + -15.1  -5.44119   CCCGAAACAAAAAAA              GCCCGGC GTT GCCGGGC              TTTTTTTCGGGTCGC 100 59
 SCL_RS13630 NONE
 SCL_RS13635 NONE
 SCL_RS13640 2818149 .. 2818165 + -10.1  -3.03124   CGAGCGCGCCGTTGC              TGCTGCC GGT GGCGGCA              TCTTCGGGAATGCCG  62 227
 SCL_RS13650 2819546 .. 2819560 +  -2.9   -5.2112   GAACGCTATGCACAG               CTATT CAAAT AATAG               TTTTTTAATAGTCTT  79 14
        hemL 2821082 .. 2821101 + -16.4  -2.87132   ACTTACAAAAAGAAA            CGGGCCGG TGGT CCGGCCCG             TGTGTGCACCCCGCA  93 153
 SCL_RS13675 NONE
 SCL_RS13680 NONE
 SCL_RS13685 2827730 .. 2827745 +  -6.8  -2.78384   GGTACAATGCCGGAC              GATGCG TGTA CGCGTC               TATCATGGCAAGGCA  52 56
 SCL_RS13690 2828913 .. 2828927 +  -2.7  -5.02074   ATGGCCTCGTTGCTG               CCCGG CCATC CCTGG               TTTTTTACCGCGTAG  77 251
 SCL_RS13700 NONE
 SCL_RS13705 2832291 .. 2832311 +  -3.9  -4.24002   AACTTCTGCATGTAG            GGATTGGTC TCG GGCCGGTTC            TTTTCCGGTTTACGC  63 269
 SCL_RS13820 2853260 .. 2853283 +  -4.4  -3.88291   AATCACGCCGCCCCA          CAGGCGC-GGC CGG GCCAGCACCAG          TTTATCCAGCTGATA  58 126
 SCL_RS13835 NONE
 SCL_RS13840 NONE
 SCL_RS13845 2859954 .. 2859967 +  -5.2  -3.55622   TCTGAAAAAACGCGT               CGCG AATTTC CGCG                TTTAAGCGCGTTCAG  55 7
 SCL_RS13875 2864447 .. 2864466 -  -3.4  -3.01712   GGGCGTGCGGCAAGA            TCAGGCGC TCAG GCGCTTGC             GGCCCTTGGCGCGGC  43 6
        rnpA NONE
 SCL_RS13865 NONE
 SCL_RS13860 NONE
 SCL_RS13855 2860785 .. 2860819 -  -2.7  -4.08767   TGGACGGCGCCAAAA    TCCATGCCGCGGC-CCA TTC TGGCGCCG-GGCGGGGC    GCACTGCAACGGATT  58 42
 SCL_RS13850 2859727 .. 2859743 -  -4.3  -5.00616   TGGCGCCCGAAAAAA              TCCACCG ACC CGGCGCA              GGTGGCCTATCTGCG  81 261
 SCL_RS13830 2854111 .. 2854127 - -13.7  -2.71712   CTTCGCCTCGGAAAG              GAGGCGC CCT GCGCCTC              GGGATCCGGCGGCTA  79 38
 SCL_RS13825 2853128 .. 2853139 -  -5.8  -2.65527   AACAACCCGAAACAC                CCAC CTCC GTGG                 CGACCAACCCGTTGC  49 74
 SCL_RS13815 NONE
 SCL_RS13810 NONE
 SCL_RS13805 2850135 .. 2850160 -  -2.5  -3.44051   TTCCGACGACCAGAA         GCCGTCTCAAAA CCG TCGCGAG-CGGC         CGTCAGCCGGGCGAG  45 118
 SCL_RS13800 NONE
 SCL_RS13795 2848974 .. 2848988 -  -4.9  -3.49951   GATATCCCGATAGAA               CCGGA TTATC CCCGG               CTCAGGCGATCTTCG  52 27
 SCL_RS13790 NONE
 SCL_RS13785 2847560 .. 2847573 -  -3.1  -3.44315   AAAAAGTTGAAAAAG               GA-CCG AAC CGGATC               AGTGACTCTCTTCGT  47 24
 SCL_RS13780 NONE
 SCL_RS13775 NONE
 SCL_RS13770 NONE
 SCL_RS13765 NONE
 SCL_RS13760 2843732 .. 2843748 -  -4.4  -5.27206   CACAGAGAATAAAAA              CAAAGC TGTCT GCTCTG              TGTTCTCTGTGTACT  85 55
        atpD NONE
 SCL_RS13750 NONE
 SCL_RS13745 2841303 .. 2841317 -  -4.2  -3.83652   AACTATAGAAAAAAG               CGCC GGGGTGA GGCG               GATTTATTGCAAAGT  58 29
        glmU 2839833 .. 2839860 -  -3.5  -2.90307   TTAACATGATTAAAT        CT-GACCATCCG TTCTT CGGATAATCCAG        TAAATCCAGTTAATC  44 45
        glmS 2837845 .. 2837858 -  -4.5  -2.95223   GAATTTTACCAGAGA               CGG-CG CGG CGTCCG               TGGAAAATCAGTCCG  46 101
 SCL_RS13730 NONE
 SCL_RS13725 NONE
 SCL_RS13720 2833387 .. 2833401 -  -5.8  -3.42996   CAGTAGTCACGATAA               TTTTTC CAA GAAAAA               TTGTGTCCCTGGTAA  56 247
 SCL_RS13715 2832623 .. 2832659 - -22.5  -4.19817   CTTAGTGATTCAAAA    GGGGATGGAGGGATTGA AGT TTAATCCCTCCATCCCC    TTTTACTATCTGTCT 100 31
 SCL_RS13710 2832076 .. 2832090 -  -5.7  -2.67166   AGCGAAGCAATTAAT               GCATC GCGCA GATGC               GCCGCCCGAACGCCT  49 6
 SCL_RS13695 2828680 .. 2828700 -  -5.3  -4.07687   ACGCGGGCGTGAAAA            CCCCCTAGC CGG GCTAGCGGC            AATCCGGCGGAAGAT  65 18
 SCL_RS13670 2822622 .. 2822652 -  -9.7  -5.71712   GCTGACACAAAAAAA       GCCCCGGAGAC AAGGGGAGA GTGTCCGGGGC       CGAACATGTTCCGGA 100 200
 SCL_RS13665 2821594 .. 2821605 -  -5.8   -4.4009   CCGCACGGCAGAAAA                CACG CTGC CGTG                 CCAAGGTTGCTGAGG  73 60
 SCL_RS13660 2821082 .. 2821101 - -16.4  -4.97405   ACTTACAAAAAGAAA            CGGGCCGG TGGT CCGGCCCG             TGTGTGCACCCCGCA 100 53
 SCL_RS13645 2817749 .. 2817764 -    -6  -3.07816   TGCGGACTCACTGAA              CCCGGC GGAT GCCTGG               CACGCGCTGCGTACG  49 216
 SCL_RS13625 2809020 .. 2809036 - -15.1  -5.95539   CCCGAAACAAAAAAA              GCCCGGC GTT GCCGGGC              TTTTTTTCGGGTCGC 100 49
 SCL_RS13610 2806820 .. 2806838 -  -3.8  -2.61548   GGCCATCACAACCCA             GATAACGC TAT GCATGATC             CCTGCCTTGGGTGTC  42 123
        fadE 2804419 .. 2804429 -  -2.6  -2.90194   ATCCTGTTAATTATA                 TTTT TTC AAAA                 TCATCCACCGCGATC  40 10
 SCL_RS13600 NONE
 SCL_RS13595 NONE
 SCL_RS13590 NONE
 SCL_RS13585 2797480 .. 2797537 - -14.7  -4.57516   ACACCGAAATGAAAA CCCTGCCGCGCGAATACCTGCACGAGC CGGA ACTGGCGCTGGTCTCCGGCCGGCAGGG ACTGGACGCCATCGT 100 242
 SCL_RS13540 2788316 .. 2788326 -  -4.6  -3.36823   GTTTTTAAAAGTTAA                 CCGA TGA CCGG                 TTTCTCGCCGCCGGG  51 11
 SCL_RS13535 2787257 .. 2787295 -  -8.1   -3.5627   ACACCAGCCTGGAAA  GCGTCCAGTGC-CGCGCCG GGG CGGCGGATGC-CTGCACGC  CAGGGACCCAGCAGG  65 462
 SCL_RS13505 2779817 .. 2779827 -  -6.8  -3.12668   TATCCTGACACGGAA                 GTCC GCA GGAC                 TAATTGACAATCGTC  54 66
 SCL_RS13500 2778435 .. 2778476 -  -9.9  -3.03441   GATGATGCCGGAACA GGTTTGGGACAGCGCGGCG ATAC CGGCGCGCTGGCTCTACCC  CGGACGCCCCACCGG  62 474
        mtnB 2769547 .. 2769557 -  -6.8  -3.43217   CGTAAACGCAACCAA                 TGGC GAT GCCA                 CCTTCGACCGCTGGC  57 342
 SCL_RS13450 2767637 .. 2767649 -  -3.3  -2.56475   GAATCCCATATCAAT                GACCC TCC GGGTT                GTACGGCTCCACCGT  40 8
 SCL_RS13445 2766611 .. 2766629 -  -4.5  -4.07885   CACGGGCGGGGAAAA             CACGCTG CTGTT CATCGTG             AAGGCGCGCTACTTC  61 268
 SCL_RS13355 2751041 .. 2751051 -  -8.2  -4.67168   AAAAACCCTGAAAAA                 CCGG GTG CCGG                 GATTGTTAGCACTCG  87 96
 SCL_RS13350 NONE
        groL 2748905 .. 2748930 - -19.1  -4.68994   ACGACCAGCCAAAAA         GAAAGCCCCGC ATAC GCGGGGCTTTC          AGTTTTACAGCAGGT 100 54
 SCL_RS13340 NONE
 SCL_RS13335 2746563 .. 2746581 - -13.1   -5.4505   GCCGTTAATAAAAAA             GGCCCCG GATAA CGGGGCC             TTTCTGTGCTGATAC 100 51
 SCL_RS13305 NONE
 SCL_RS13300 2738401 .. 2738416 -  -3.4  -2.77787   AACAGGATTTCAAAC              TAAAAA AACC TTTTTA               CGTTTCTCGCCTTAA  41 73
 SCL_RS13295 NONE
 SCL_RS13290 2736824 .. 2736844 -  -4.6  -3.25823   GTTCTCCGAGATCAA           CCG-CGTGC TCAA GCCCGGCGG            GCATTTCCATCACTG  50 342
        waaF NONE
        rfaQ NONE
 SCL_RS13265 2732319 .. 2732333 -  -2.8  -2.52543   AGTTGCGGTAATTGA               CGATGA ACT TCATGG               CGGCGCGAGCAAACC  40 20
 SCL_RS13260 NONE
 SCL_RS13255 NONE
 SCL_RS13250 NONE
 SCL_RS13245 2727510 .. 2727536 -   -10  -3.81062   ACGAAAAAGTGGAAA         CCGGCGGCAAGA TCA TCACGCTGCCGG         GCGACCTGCTGCACG  74 309
        waaC NONE
 SCL_RS13230 2724377 .. 2724394 -  -8.3  -3.24188   GCAGATCATGATCAA             CGGCCGC TCGC GCGGGCG              CGACGGGTCGTTCGC  58 411
 SCL_RS13210 2720650 .. 2720700 -  -9.4  -3.21099   TTTCTTGACCATTAA GTAAGTATATATACTTACTTTTTA TTG TAAATAGTAAATGTATAGACTTAC TATTTTATTAATTAC  65 75
 SCL_RS13205 NONE
 SCL_RS13200 2719573 .. 2719607 -  -2.8  -2.72371   CTCCGGAAACAACAT    GTGTTCCGGCCA-AG TCTTGC CTATGGCCGACGCAC     GAATTCGGTCAGCTT  41 11
 SCL_RS13195 2718353 .. 2718386 -  -8.9  -2.87132   GTCTTGCCGGACACA    CGGC-GTGGCG-CGC TCAGGC GCGCCGCCACAACCG     GCGCATGGCGATCAG  62 5
 SCL_RS13190 NONE
 SCL_RS13185 2716106 .. 2716129 -  -7.4   -5.0925   CGCCAAAACGAAAAA          GCCCGAACAC TTCC GTATCCAGGC           CTTTATGAGTGAAAG  91 213
 SCL_RS13180 NONE
 SCL_RS13175 2713347 .. 2713366 -   -10  -2.71263   AAGGCTGTTCAATGA            CCGTCCTC AATT GAGGACGA             TTCCCTTTCTTCATT  64 40
 SCL_RS13165 NONE
 SCL_RS13160 2710452 .. 2710463 -  -5.8  -3.73775   TTTACGCTGATCAAA                GGGT ACTG ACCC                 CTTTAATCAGTTTAA  60 37
 SCL_RS13155 2709034 .. 2709044 -  -2.4    -2.569   CAAGCGAAAGAAATC                 GTGC CCG GCCC                 TTTTAATTATTTTGA  38 32
 SCL_RS13150 2708450 .. 2708466 - -11.5  -4.14392   TCCGAACCCTCAAAA              CGGCCCC GCG AGGGCCG              TTTCTATTGTGAGGC  88 47
 SCL_RS13145 2708148 .. 2708171 - -12.4  -5.31275   CGGCACCAGAAAAAA          TAACGGCCCC TCGC GGGGCCGTTT           TGGTTTCGGGGTCCG 100 64
 SCL_RS13140 2707196 .. 2707214 -  -4.4  -5.38951   AACGTACAGAAAAAA             CGCCAAAG GGA CACCGGCG             ATTGCCCATCCCAAT  90 84
 SCL_RS13135 NONE
 SCL_RS13130 NONE
 SCL_RS13125 2704559 .. 2704576 - -14.1  -4.41494   CAGCTCCAACCAAAA             CGGCCCC GCGA GGGGCCG              TTTTGGTTTCAGCGT 100 109
        recQ NONE
 SCL_RS13110 2699942 .. 2699980 - -15.5  -3.75153   CGGGTTCAACGCAAA  CCAAACACAAACGGCCCC GCGC GGGGCCGTTT-TGTTTTG   AATCTCCGCCGAACT 100 39
 SCL_RS13100 2697547 .. 2697559 -  -4.7  -3.87994   AGGCAGGGTCAGAAA                CGACG CGT CGGCG                CACCCGTTATCGCGC  58 56
 SCL_RS13095 2696914 .. 2696930 -  -7.2  -4.09685   GGGTATTGGCGAAAA              CCCGGA ACCGG CCCGGG              TTTTCAGTGTGCTAC  74 37
 SCL_RS13090 2695398 .. 2695411 -  -5.2  -3.01712   CGCTCCGGCTCAACA               GCCG CGGGGC CGGC                GAGCTGTGCGTCCTG  47 481
 SCL_RS13075 2692624 .. 2692634 -  -4.6  -4.02424   AGGAATTACGAGAAA                 CCGA TAT CCGG                 CCCCGCTTGTTCTCA  60 38
 SCL_RS13070 NONE
 SCL_RS13065 2691556 .. 2691585 -  -7.1  -3.13403   TCTCGCGCAGGAACA       GC-AGCAACCGCGC ACG GTGCAGTCGCTCGC       GCCCGAGCGGCAAGT  53 199
 SCL_RS13050 2689533 .. 2689543 -  -6.8  -2.52543   ACCTGGCGCAACTGA                 TCCG GCC CGGA                 TTTTCATTACCCGCG  51 32
 SCL_RS13045 NONE
 SCL_RS13040 NONE
 SCL_RS13035 2686961 .. 2686976 -  -7.5  -3.63464   GGCTAAATAACAAGA              CCCGG TATGGG CCGGG               TTCGAGGGGATGCAA  65 74
 SCL_RS13030 2686303 .. 2686320 -  -7.1  -3.14931   TTTACTTTTCACTAA             TTTCTGT CATT ACAGAAA              TATGCAGCTAAAAAA  54 48
 SCL_RS13025 NONE
 SCL_RS13020 NONE
 SCL_RS13015 NONE
 SCL_RS13010 2683491 .. 2683505 -    -7  -4.28188   TAGTTATAAGACAAA               CCGCGG TTC CCCCGG               AAAACCTCTGCAACA  74 282
 SCL_RS13005 NONE
 SCL_RS13000 2681227 .. 2681243 - -12.3  -2.83747   CAAGCGCGAGAATTA              CCGCGAA GCC TTCGCGG              GCTTCAATCCCGAAC  67 395
 SCL_RS12980 NONE
 SCL_RS12975 NONE
 SCL_RS12970 2677804 .. 2677828 - -20.1  -6.06723   TTTCGTAAAAAAAAA          CGGCGGGTTCA GTA TGAACCCGCCG          TTTTTTATTCAACGA 100 49
 SCL_RS12960 NONE
 SCL_RS12955 2675935 .. 2675950 -  -8.2  -2.71791   ATGCTGCCCTCAAAC              GCGCCA TGCT CGGCGC               CGATTGAACTGGATC  57 68
 SCL_RS12925 2669818 .. 2669873 -  -2.5  -3.65902   TCGACGGCAGTGAAA CCTCCA-TGGCC-GCCCTGCGCGAGGCG ATC CGCATCGGACAGTGCCAGCAAGTGG-GG ACCCAGATCCGCCTG  49 413
 SCL_RS12910 2668521 .. 2668534 -  -8.1  -3.14132   GGTGCTGCTGACCAA               CCTGC CGCT GCAGG                CCCTGGCGGGCAACG  58 464
 SCL_RS12900 2666599 .. 2666610 -  -5.8  -3.57615   TGAAGATGGGCGAAA                CCTG GGCA CAGG                 ATTTCATCGCCCGGG  57 108
 SCL_RS12890 2660883 .. 2660921 -  -4.5  -3.15544   GCTGATCGCCACCAA  CTGCGTGGTGCTGGCACCG CCG CTGTTCCAG-ACCGCGC-G  CGGCTACGACCTGGT  47 441
 SCL_RS12845 2650243 .. 2650253 -  -8.2  -2.83403   CCGGGTTTATCAAAC                 CGGC TTC GCCG                 TTGCCGCCTTGGCGG  57 9
 SCL_RS12840 2649631 .. 2649642 -  -7.2  -2.84098   GGCGCGAACGAAGCA                CCCG ACGG CGGG                 ACAGTCGCGACCCAT  55 44
 SCL_RS12835 NONE
 SCL_RS12830 NONE
 SCL_RS12825 2647211 .. 2647227 -  -4.3  -3.40899   AATCGTCCACTACAA              CCGCACT TCC ACCGCGG              CACCGCCCAGCGGGC  51 3
 SCL_RS12820 2645929 .. 2645969 -  -9.7  -3.53563   ACATCCTGGTCGAAA GCGA-CGTCGCCGGCGTGC ACCTG GC-CGCCAGCGAAGACCGC TTTCGCATCATCTTT  65 426
 SCL_RS12805 2643659 .. 2643688 -  -5.6  -3.14344   CACGCCGGCGAGGAA       GCGGAAACCCAG GAAGGG CTGGAGATCCGC        GCGCGCGTGCTGGAG  51 156
 SCL_RS12780 NONE
        cysQ NONE
 SCL_RS12770 2638679 .. 2638695 -  -2.3  -2.90442   AATAACAGCAATAAC              CAGAA GCAACAG TTCTG              CAGCGCGCCAGACTG  40 147
 SCL_RS12765 2637621 .. 2637643 - -10.4  -3.26471   TCACGCCTACATCAA           CCGCGGCCCG GAA CCGGCGGCGG           CGCTGGTCGTCTACA  66 122
 SCL_RS12750 2635105 .. 2635118 -  -9.5  -3.14931   CGCACGCGCCAGGAA               CGGCG CCTG CGCCG                CTTCCTGTGGCGCGG  61 120
 SCL_RS12730 NONE
 SCL_RS12725 2630736 .. 2630752 - -15.1  -2.70932   CCGGCGCCGGAAGGA              CGGCGCG GCA CGCGCCG              GAATTCACAACCTAT  83 37
 SCL_RS12720 2629990 .. 2630007 - -14.1  -3.73775   TTGAGCTGCACCAAA             GCGCCCC GAAA GGGGCGC              TTTGCTTTGTAAGCC  95 42
 SCL_RS12710 NONE
 SCL_RS12705 NONE
 SCL_RS12700 2623282 .. 2623295 -  -3.7  -3.68351   CGCCGACGACTCAAA               GCTCG TCGA CGTGC                TCGGCCGGTTCCCGC  56 364
        ilvA 2621023 .. 2621047 - -20.1  -3.91716   CCAGGCTGTAAATAA          CAAAGCCGCCC TCC GGGCGGCTTTG          CATTTGTGTCGCCTG 100 301
 SCL_RS12650 2616797 .. 2616818 - -17.3  -2.52015   GCGACAGCGACGAAC           GCCCGGCCA GGGA TGGCCGGGC            TGGACTTCGAGCGAA  90 252
 SCL_RS12635 2613796 .. 2613808 -  -2.7  -2.87725   TGGCAAAAATAATAT                TAATG CTT CATCA                GCGCTTCGATCTCGG  42 12
 SCL_RS12630 2612242 .. 2612268 - -15.3  -3.36515   GGCGAGCCGGAAACA         GACGAAGACAC TTAAC GTGTCTTCGTC         CCGGCGAGCGCCCCG  95 234
 SCL_RS12625 2610989 .. 2611003 - -11.4  -3.79481   CAAACTTAATGCAAA               GCTCGC CTC GCGAGC               TTCGGCAAATCCCCT  82 1
 SCL_RS12620 2609897 .. 2609910 -  -5.9  -2.79842   AATATTGATTAATTA               GCCCC CTGC GGAGC                CTCTTTGCTTTTCAT  50 5
 SCL_RS12615 NONE
 SCL_RS12610 NONE
 SCL_RS12605 NONE
 SCL_RS12600 2607815 .. 2607845 -   -11  -3.78934   GGCGTTCGAGAAGAA       GTGCGCCGCCGCCA TCG TGCCGGTGGCGAAC       CTGATGAAATTCTCC  76 283
 SCL_RS12585 2604619 .. 2604639 - -12.5   -2.7185   ATCACTGTTGAATCA            TGCGCGCCA ACG TGGCGCGCC            TCCCTACTTGATCTG  76 42
 SCL_RS12580 2603493 .. 2603505 -  -7.7  -3.14132   GTTCGGCGGCACGAA                GGTTC ACT GAACC                TTCGTGAAAACCCCG  57 77
 SCL_RS12545 NONE
        glyQ NONE
 SCL_RS12535 NONE
 SCL_RS12530 NONE
 SCL_RS12525 NONE
 SCL_RS12520 2590567 .. 2590603 - -28.3  -4.25104   CTGCTCGGACTAAAA    CGGGACGGAGGGATTAA ACT TTAATCCCTCCGTCCCG    TTTTAGGACCTCTCC 100 28
 SCL_RS12490 NONE
 SCL_RS12485 2581730 .. 2581746 -  -9.4  -4.30978   CCGAATCCATGAAAA              GACGGC TGCGC GCCGTC              TTTTTCCATTGGCAA  84 425
 SCL_RS12445 NONE
 SCL_RS12440 NONE
 SCL_RS12435 NONE
 SCL_RS12430 2566022 .. 2566037 - -11.8  -5.71712   TTCCAGACAAAAAAA              GCCCGC TTTC GCGGGC               TTTTTTGTTACTGAA 100 52
 SCL_RS12425 2564068 .. 2564101 -  -2.9  -3.78775   GCCTGCAGCAGGAAA     TCCAGCGCGCCCGCCG TTA CCGCCGGC-CGCTGTC     GGTGCTGATGCTGGA  54 438
 SCL_RS12415 2562680 .. 2562722 - -14.9  -4.26344   AGATCCGGAGGAAAA TACACGCGTCATCCGCGCCG GTGG CGGCGCGGATGACG-GTCCC GTGACGGGCTCAAGG 100 69
 SCL_RS12410 2561878 .. 2561890 -  -3.4  -4.07568   TGCTGGTCGGGAAAA                TCGT GCGCG ACGA                GACACGGGTGGCGGT  58 379
 SCL_RS12390 2557812 .. 2557823 -  -2.2   -3.8822   CAGATCAAACCCAAA                GACGC GAC GCG-C                TGCTAACCGGCATAC  52 28
        ccoN NONE
        ccoO NONE
 SCL_RS12375 NONE
        ccoP NONE
        ccoG 2552769 .. 2552800 -  -3.6   -3.8647   AGTCATTATATTAAA      TCCTGGATTCCCGC TTCC GCGGGAATGACGAA       CCTAAAAAAACCTCT  56 160
 SCL_RS12360 2552055 .. 2552065 -  -4.6  -4.08216   TCACCCCGGCGAAAA                 CCGG GGT CCAG                 AATATTAGAAACAGA  62 198
 SCL_RS12355 2551238 .. 2551252 -  -7.8  -3.55563   ATCTGATTTTGTAAA               GCGCAT GAT ACGCGC               CTTACATTTTATTGC  62 34
 SCL_RS12330 2547500 .. 2547521 -  -5.1  -4.78237   CACTGCATAATAAAA           CACGGCGTA TATC CACGCCATA            GAAACCAAAAAAATC  76 39
 SCL_RS12325 NONE
 SCL_RS12320 2546412 .. 2546432 -  -2.6  -3.16399   GAAATGCAAAACAAT            CTGTTTAT TATTC ATAAACTG            GTTCGCCTCCCAAAT  43 111
 SCL_RS12315 2544575 .. 2544605 -  -7.5  -4.62336   ACCGGATGGGAAAAA       GTGGCGCCACGAA GCAAT TTCATGGCGCCTG       CTCCAGACGTATTGT  83 14
 SCL_RS12310 NONE
 SCL_RS12305 2542968 .. 2542982 -  -9.2  -3.06696   GTCCCCGTCAAGACA               GGCCGG ATA CCAGCC               TTTTTCACGCCTTGG  63 61
 SCL_RS12300 2541633 .. 2541648 -  -4.6  -2.78384   GCTCTGTCGACGATA              TCGGTC ATTA GACCGC               TATCGGCAGCTGTCT  45 17
 SCL_RS12295 NONE
 SCL_RS12290 2540277 .. 2540297 -  -2.5  -4.66163   ACTCCTATGCAAAAA            TAATTGAGC CTA GCTCCTTTA            ATTCGCAGCTCCTTT  65 68
 SCL_RS12280 2538560 .. 2538570 -  -8.2  -2.56596   GTTTTCAGGAATCCA                 CCGG AAA CCGG                 GGTCCACCCCCCCTC  56 40
 SCL_RS12275 2536235 .. 2536248 -  -6.7  -2.75992   GGCGAGCGAACAGGA               TTGCG ACAC CGCAA                CAATCAGGGTCCGGA  52 29
 SCL_RS12270 2535217 .. 2535258 -  -3.1  -3.53811   CCGAGGCCTTGGAAA TGGCCTAT-GAAGTGTTC TTGAATT GAAGTCCTCTATAGGCCA ATTGCAGGCTTTCGC  49 92
 SCL_RS12265 2533901 .. 2533921 -  -6.7  -4.85599   CGCACCCTACAAAAA            CTGGCGCGT GGT ACGCGCCCT            ACTCCGTCATTCCCG  85 134
 SCL_RS12260 2531315 .. 2531331 -  -5.7  -4.57073   CAGGGTGGGCAAAAA              CGAAGCG TTG CGCACCG              TTTGGCATATATCGG  75 151
 SCL_RS12250 2529209 .. 2529236 -  -7.7  -3.32844   CCTCGCACCCGACAA        CGGCACGCTGGT GTGGG ACCGGC-TGCCG        ATGAGCATCGGCTTC  58 435
 SCL_RS12240 2528275 .. 2528310 -  -8.2  -4.39002   AAATGGGCGACAAAA    CCCAGCTCGCCACC-GT GGC ACTGGCGGCGCGCTACG    AGTCGCTGGTAGCCG  79 229
 SCL_RS12210 2524540 .. 2524561 - -17.3  -5.81412   TGTATGCAAAAAAAA           GACCCCGCC TTTC GGCGGGGTC            TTCACTTCAGAACCT 100 59
 SCL_RS12180 NONE
 SCL_RS12175 2516768 .. 2516782 -  -3.4  -4.11512   GGAGAAGAAAAAAAC               GCCGAC CGC GCCCGC               CAACACACCCTGAAA  58 101
 SCL_RS12165 2515118 .. 2515128 -  -4.6   -5.1101   CTAGCAGGCAAAAAA                 CCCG CCG CGAG                 GTCAGAAAATGAGCT  80 27
 SCL_RS12160 2514502 .. 2514551 -  -2.9  -4.19024   GAAACCACAGATAAA CACAGATGAACGCGGATAAAAAA GAGA TTATTTGTCAGTGTTAATCCGTG TTCATCTGTGGTTCC  58 78
         xth NONE
 SCL_RS12140 2511913 .. 2511933 -  -4.5  -3.14132   TGCGCGCGTCACCAA            CGGGGCGCG CAC CGTTCCCCA            GATCCTGATCGATGG  47 167
 SCL_RS12125 2508900 .. 2508924 - -18.6  -2.73681   CACCCATGGCAAGCA          CCCCCACCGG TTAAG CCGGTGGGGG          TGGAGAAAACAACGG 100 94
 SCL_RS12120 2507574 .. 2507599 - -20.5  -5.58522   TACAGAAAATAAAAA         GGCCGGAAGGG TCGC CCCTTCCGGCC          TTGATTTATCCGTCA 100 51
 SCL_RS12095 NONE
 SCL_RS12090 2501254 .. 2501267 -  -9.5  -5.31275   TGTCACGACAAAAAA               GCCCC TCGC GGGGC                TTTTTTGTTTCAGGG 100 75
 SCL_RS12045 NONE
 SCL_RS12040 NONE
 SCL_RS12035 2492231 .. 2492244 -  -3.7  -3.92522   TTCCAACGCCAGAAA               CCGGG GCGT CCCGC                AAAATCCCTTTACGA  58 42
 SCL_RS12030 NONE
 SCL_RS12025 NONE
 SCL_RS12020 NONE
 SCL_RS12015 2483199 .. 2483216 -  -9.8  -3.02144   TCATGCGCTCGAACA             GGGCGC GCTGCT GCGCCC              GCTCGGCGACGTGAT  62 203
 SCL_RS12005 NONE
 SCL_RS12000 NONE
 SCL_RS11995 2479623 .. 2479646 -  -3.8  -3.57561   CGCCAATTCCGGAAA          CAACAACACC CCTT GGCACCGTTG           GGCTGGTCAGTCACC  51 266
         tkt 2477417 .. 2477474 -  -2.3   -4.4784   GAAACCGCAAATAAA CGCAGATGAACGCTGATTAACAAGA TTCCGTTTTG TCTT-TTA-TCTGCGTTTATCCGCG TTCATCTGCGGTTCC  62 48
         gap 2476332 .. 2476345 -  -3.7  -4.09685   TTTGATTCTGGAAAA               CCTGG CGTT CCTGG                CGTCCTGGTGGTTCG  60 47
         pgk NONE
         pyk NONE
 SCL_RS11970 2472405 .. 2472434 - -15.1  -4.65933   CATCCGGAAAAGAAA       TAAAAAGGGGCGG TTGC CCGCCCCTTTTTT        TACCGCATGCAACTT 100 51
 SCL_RS11965 2471934 .. 2471949 -  -6.8  -3.28712   CGGTTGTGCGCATAA              TCCCCG GGTC CGAGGA               CCCTGTTCAGCTAGC  56 32
 SCL_RS11960 2468213 .. 2468230 - -14.1  -5.86976   TCAGAAAATAAAAAA             GGGCGGC TCGC GCCGCCC              TTGAGAAAAAACATC 100 51
        rbcL NONE
 SCL_RS11945 2465196 .. 2465224 - -20.3  -5.33405   TGTATGAAAGAAAAA        GCCCCTGCCCGAC GAT GCCGGACAGGGGC        CGATTACGGCTCTGC 100 53
 SCL_RS11940 NONE
 SCL_RS11935 2463946 .. 2463959 -  -8.1  -4.08216   GCAGGGTGCGCAAAA               GCGCA GCGT TGCGC                ACCGTTTGCGCTTTT  77 85
 SCL_RS11930 2461443 .. 2461453 -  -2.4  -3.56226   AATTATCCACAAATA                 GGGG AAA CCCG                 GCATGAGAATCAGGC  47 150
 SCL_RS11925 NONE
 SCL_RS11920 2458866 .. 2458877 -  -3.6  -5.00616   GTGGCGGGGAAAAAA                CCGA AGAT CCGG                 CAGATGCCCTAGCGC  77 34
        rbcL NONE
 SCL_RS11905 2455703 .. 2455737 - -21.4  -4.58685   AAATTCGGGGAAAAA     CCCGGCCGGCGCGG TTTCTGG CCGCGCCGGCCGGC     ACGGCATTTACATCA 100 47
        cbbX NONE
 SCL_RS11895 2454328 .. 2454339 -  -4.4  -3.75295   CATAAATCATTCAAA                GAGA ATTT TCTC                 TGCGGCTTTTGCGTT  55 82
 SCL_RS11890 2452911 .. 2452945 - -11.4  -3.00525   GTTTTGGAAATCACA     CCCTCTCCCTGGCC CTCTCCC GTCAAGGGAGAGGG     GAAGTTGTTTAATTC  71 72
 SCL_RS11885 2451815 .. 2451845 -  -6.9  -2.53273   TCAAATCATTAATAT      GCTG-GATTCCCGC TTCC GCGGGAATGACAAC       CAAACCTGGTTATTT  51 35
 SCL_RS11880 2450717 .. 2450731 -  -5.7  -3.53012   GTTCGGCGGCGCAAA               CACAC GTTAA GTGTG               TTTGCGAAGACTCCG  57 114
 SCL_RS11875 NONE
 SCL_RS11870 2449247 .. 2449259 -  -6.2  -3.17956   AAAGGACCGCAGTAA                GGCG GATGT CGCC                GATGCATCGGCGAAT  51 127
 SCL_RS11860 2447614 .. 2447662 - -10.4  -2.56164   CGGCTAACGACGAAG TTCAGCCATCGTCCTGCC ACGACAAAACAAA GGCAAGACGGCGGCTGAA GCGTCTGGGTGGGCG  66 74
 SCL_RS11855 NONE
 SCL_RS11850 2443840 .. 2443863 - -18.2  -5.40072   CCCGCCGCAAAAAAA          GAAGGGCGGC CGGG GCCGCCCTTC           GTCAGATGGCATGAC 100 47
 SCL_RS11775 2432847 .. 2432857 -  -4.6  -3.53444   GCACGCTGTCGCAAA                 CCCG GGC CAGG                 GTGAAGTCAGGCGGG  52 92
 SCL_RS11770 NONE
 SCL_RS11765 NONE
 SCL_RS11760 NONE
 SCL_RS11755 NONE
 SCL_RS11750 2425929 .. 2425940 -    -3  -3.63068   TTACAGGATTTTAAA                GAAA AAGT TTTC                 GGGTTTTATCCTGTG  51 70
 SCL_RS11745 2425323 .. 2425333 -  -2.4  -3.15249   GACATCGTTCAGGAA                 CGGC AAG GGCG                 GGCGTTCCCGCGGCG  42 61
 SCL_RS11740 NONE
        purE NONE
 SCL_RS11730 NONE
 SCL_RS11725 NONE
 SCL_RS11720 NONE
 SCL_RS11715 NONE
 SCL_RS11710 2419156 .. 2419199 -  -7.4  -4.24562   AAAAAATCATACAAA CGTAG-GTTGGGGTGAGGCGT GGT ATGCCGAACCCCAACGCTACC AGCCATATGTTGAGC  77 213
 SCL_RS11700 2416877 .. 2416889 -  -4.8  -3.18735   GGAACACCGGATCAA                TGGG CGTGC CCCA                TCCGCGCCTTTTCCT  49 9
 SCL_RS11695 2416171 .. 2416181 -  -4.6  -4.33928   CAGGCCAAACAGAAA                 CGCG GGG CGCA                 GCGAAAGAACTGAAG  66 169
 SCL_RS11685 2412920 .. 2412951 -  -7.5  -3.30124   TTGGATTCGGCATAA     CCTTAGACCTT-CCA ACCA TGGTAAGGTC-AAGG      CTCTCACCGCACCCT  59 156
 SCL_RS11680 2412671 .. 2412698 -  -4.7  -3.01924   GACTCCCGGGCAACA        CCGCGTCAGCC TTCATT GACTTGCGCGG         GATAACCCGCCTCGG  47 3
 SCL_RS11675 NONE
 SCL_RS11670 NONE
 SCL_RS11665 2409133 .. 2409151 - -13.1  -5.19212   ATGAGTAGCAAAAAA             CGGGGCC GCGAT GGCCCCG             TTTTTTATGCGTCGT 100 69
 SCL_RS11650 2407154 .. 2407167 -  -5.2  -3.95873   CCCTCATAAAAAAAT               CCGG GTGCTG CCGG                GGCAGGTTCTGCTGC  63 109
 SCL_RS11645 NONE
 SCL_RS11640 2405497 .. 2405517 - -12.5   -2.7555   CAGACGGCAACACGA            GCAGCGGCC CAG GGCCGCCAC            CAGCGCAGATCCGAC  76 73
 SCL_RS11635 NONE
 SCL_RS11630 NONE
 SCL_RS11625 2402092 .. 2402102 -  -2.4  -4.49756   TCTCAAAGATGAAAA                 CGGC AAA GGCG                 CGATTCTGTCGCCGA  62 54
        trpD NONE
 SCL_RS11615 NONE
 SCL_RS11610 NONE
 SCL_RS11605 2399290 .. 2399312 -  -6.9  -3.48395   ACGGTGGCCATAGAA           TCCGGCGGC GCTGA ACTGCCGGA           ACCCATCCGCCAGGC  57 94
 SCL_RS11590 2396597 .. 2396618 - -15.9  -5.77853   AACGGGCAAAAAAAA           GGCGTGGCT GGGG AGCCACGCC            CGAACCACCACTAGG 100 424
 SCL_RS11585 NONE
 SCL_RS11580 2395515 .. 2395544 - -13.7  -4.59853   TTAACCGGCTAAAAA       TCATTAAGCCACC CGGA GGTGGCTTAATGT        ATTTCCGAGTCGCCG 100 49
 SCL_RS11575 2395357 .. 2395401 - -24.6  -2.76162   CATCCTAGTCCAAAT CGAAAATCAAAACGGCCCGC ACGAG GCGGGCCGTTTTGATTTTTG GCTGGGGGACTAGGA 100 23
 SCL_RS11570 2393799 .. 2393816 - -14.1  -5.81412   CTGACTGAAAAAAAA             CGGGGCC CGAA GGCCCCG              TCACTCGATACTGCT 100 75
 SCL_RS11565 NONE
 SCL_RS11560 2391733 .. 2391765 -  -6.3   -4.3739   CATGTTCGCAGAAAA      CCGGCGTCAGAGA AAATCCG TCTCTGACCCCAA      TTTCTTGCCGATTTC  71 55
 SCL_RS11555 2391148 .. 2391184 -  -3.7  -2.63901   ACTTGATGAACCAAT    TATCCTATTCCTGACCC TGT GGGTCAACAATTAGCTA    GTCTTCGACATCCAG  42 23
 SCL_RS11550 2390708 .. 2390738 - -14.9  -3.91072   CGAAAGCGGCAGAAA      CG-AAAAAGGGCCC TTGC GGGCCCTTTTTGCG       TGCGTCTTGTGCGGT 100 42
 SCL_RS11535 2386573 .. 2386593 - -13.3  -3.61652   TTTTTAAAGAACGAA            GGCCGATAC AGG GTACCGGCC            CAAGGGAGGCGCATT  89 212
 SCL_RS11530 NONE
 SCL_RS11525 NONE
 SCL_RS11520 2384501 .. 2384542 - -10.9  -4.15565   CTCACTACGTCAAAA GACAGAAAGCAGCAGATGA ATCT TCCTCTGCTGGTTTCCGGC  CTCGGAGGTGGTGGA  86 34
 SCL_RS11515 2381399 .. 2381416 -  -4.1  -3.72576   TTGGCTTCGACCAAA             CACCC GGCGTCTT GGGTG              TTATATGGTCAAGCC  53 18
         rrf 2381148 .. 2381171 - -14.6  -5.95286   ACGAAAAATAAAAAA          CTCCCGGCAC TTTC GTACCGGGAG           TTCTGAAAATAAAGC 100 39
 SCL_RS11505 2379181 .. 2379219 -  -5.9  -4.56775   ACGCGGTGGTAAAAA   CCTGCCACAACCGCGAC CTGCT GCCGCAACTGGAACAGG   TACTGAAACTCTCGG  76 474
 SCL_RS11495 2378468 .. 2378496 -  -5.1  -3.06796   GGTGAGTGCAGTGAA        CCCCAACAAGCGG CGA CTGAGCGTTGGGG        TTCGGCGCGACCCTC  50 117
        epmB 2375707 .. 2375723 - -13.7  -2.84134   ATATCCAGCAAGAAC              CTCGCGG GTT CCGCGAG              CACGCCGGGCCGCCG  79 129
 SCL_RS11475 2374389 .. 2374417 - -23.3  -4.89521   ACATTCCAAAGAAAA        GACACCATCCGGC GCG GCCGGATGGTGTC        TCCGCTAACGCATGT 100 42
 SCL_RS11470 NONE
 SCL_RS11465 NONE
 SCL_RS11460 NONE
 SCL_RS11455 NONE
 SCL_RS11450 2368170 .. 2368187 -  -4.2  -3.19463   TGGATGAGTTATTAA             TTTTCG CCTCCC CGAAAA              GCCGGTGCATTGCAA  49 122
 SCL_RS11445 NONE
 SCL_RS11440 2366235 .. 2366255 -  -8.9  -3.40403   TCGGTGCGACGAGAA            CCGCGCCAG GCG CTGACCCGG            CGGCACCGCAGCATG  66 56
 SCL_RS11435 NONE
 SCL_RS11430 NONE
 SCL_RS11425 2363703 .. 2363715 - -10.5  -3.52093   ACATGGCAAGTATAA                CCGCC CGC GGCGG                TGCAGCCCACTCAGC  74 36
 SCL_RS11420 2363209 .. 2363222 -  -5.9  -2.87344   GAGGTGCTGTAGAGA               CGCGC ACAG GCGCA                GTCAGAATAAACCTA  51 252
 SCL_RS11410 2361384 .. 2361400 - -12.3  -2.71011   ACGGCTCTTTAATGA              GGTCGCA ATT TGCGACC              TCATATTTTACAGAC  72 365
 SCL_RS11405 2358909 .. 2358925 -  -6.5  -3.93166   TCCGGAAAAAATGAA              GCCGCAA ATT TTGCGGG              AGTAACCCCGCATTG  68 90
 SCL_RS11400 2358739 .. 2358753 -  -3.5  -2.76263   TCTACCATTGAACTA               CACCC GCTTT GGATG               TTTGTTTATAGATGA  43 84
 SCL_RS11395 2358659 .. 2358677 -  -3.1  -4.70659   GGCGATATTCAAAAA            GC-CCAGC CTGA ACTGGAGC             GGGTAGCGGGAATCG  70 19
 SCL_RS11390 NONE
         tuf 2357266 .. 2357297 - -11.7  -3.21218   AGGTTTCACGATTAA      GGTTTCAGGTTCC CGACAT GCAACCTGAAACC       TGTAACATGAAACAC  78 43
 SCL_RS11380 NONE
 SCL_RS11375 NONE
 SCL_RS11370 2356183 .. 2356240 - -14.6  -4.18494   TACTTCGAGTTAAAA GTGAAAAGTTAAAAGTACAAAGTGAA AAACCA TTCACTTTTCACTCTTCACTTTTCAC TGCCTTCCTACGCCT 100 33
        rplK NONE
 SCL_RS11360 2354967 .. 2354988 - -15.9  -3.19656   AAAGTCACTTATGAA           CGCGGTTGG CAAG CCAACCGCG            TTACAACAATTTAAT 100 40
 SCL_RS11355 NONE
 SCL_RS11350 2353732 .. 2353771 - -14.2  -3.38046   CGTTTACTTGAAACA  CGGGACAGCGCCGGCGGCA TTA CACCACCGGCGCAA-CCCG  CATGGACTGCGCACA  95 84
        rpoB NONE
        rpoC 2344971 .. 2345000 - -15.1  -5.08824   TGTCGATTCAAAAAA       CACGAACCTCCGC CATG GCGGAAATTCGTG        GATTAATTCGCCACC 100 303
 SCL_RS11335 NONE
 SCL_RS11330 2344089 .. 2344101 -  -4.1  -2.92935   AGAACGGTTAAACTA                CTACC AGC GGTAA                TGCGAGAAGGCCTTG  44 13
        fusA NONE
         tuf NONE
 SCL_RS11315 NONE
 SCL_RS11310 NONE
 SCL_RS11305 NONE
 SCL_RS11300 NONE
 SCL_RS11295 NONE
 SCL_RS11290 NONE
 SCL_RS11285 NONE
 SCL_RS11280 2336525 .. 2336574 -  -6.3  -2.85784   CAATCCAATTAAGTA GTTATCCTACTCCCCCTCTCCCGC TCT GCGGGAGAGGGCAAGG-GGAGAGG GCTTCCTCAAATCGT  51 41
 SCL_RS11275 NONE
 SCL_RS11270 NONE
        rpsQ 2335615 .. 2335626 -  -2.2  -2.87146   CCGGCCGAGAACAAG                GCCT TGTC AGAC                 TTCCCGGGCCCGCTC  40 20
 SCL_RS11260 NONE
 SCL_RS11255 NONE
 SCL_RS11250 2334270 .. 2334288 -  -4.4  -4.65895   TTGGCCATGCAAAAA             TCCTCAGC TGC GCAGCGGA             AAACTGAACGCCACC  71 10
 SCL_RS11245 NONE
 SCL_RS11240 NONE
 SCL_RS11235 NONE
 SCL_RS11230 NONE
 SCL_RS11225 NONE
 SCL_RS11220 NONE
 SCL_RS11215 NONE
 SCL_RS11210 2330084 .. 2330099 -  -5.4  -3.64703   CTGTTGCCACTCAAA              CCGC-CT GCT AGCGCGG              CAGACCCATCCCGCC  58 17
        rpmJ NONE
 SCL_RS11200 NONE
 SCL_RS11195 2328917 .. 2328932 -  -4.6  -2.56596   TCCGTCAGGAATTTA              CACGCG ACGC CGCTTG               GCCGGACGGCACCCG  44 7
 SCL_RS11190 2328225 .. 2328237 -  -3.4  -3.29043   AATTCGGTTGCAGAA                CTCT GCATG AGAG                CGTCCTCGTTAAGAT  45 51
 SCL_RS11185 2327222 .. 2327240 -  -6.6  -2.71364   CTACGCTTTTAATCA             GGAGGCGG AAC CCATCTCC             GGGGTTTTTTCCCTG  52 4
 SCL_RS11180 2326616 .. 2326645 - -18.1  -3.53444   TTACGGCGCTTTAAA       TAAAAAAGCCGGG CATG CCCGGCTTTTTTA        ACAAGGGGAAACCGC 100 43
 SCL_RS11175 NONE
 SCL_RS11170 2323279 .. 2323321 -  -3.9  -3.35046   GGAGTTCCTGAAACA CTTGCTGGAGC-GCGCCGCG CCGC CCCAACGCCGCGCCGGCTAG CCTAGCCGGCGGTTC  49 27
 SCL_RS11160 2318941 .. 2318959 -    -3  -3.92132   GGAAAGATAAAAAAG             GCTTTCAC CCG GTGATTGC             GCTGCGCTGTGCGGC  56 64
 SCL_RS11155 2318193 .. 2318216 - -16.8  -5.45652   AGCGGCAATAAAAAA          GGCGTGAAGG AAAC CCTTCACGCC           TTGGGGTAAATTGCT 100 48
 SCL_RS11135 NONE
 SCL_RS11130 2315379 .. 2315436 -  -2.2  -3.06261   TTTGAACTGCCAAGA CGCCAAGAACGCCAAG---GGTTTTTCTT TTC AAAAAAATCTTTTCTTGGCGACCTTGGCG TCTTGGCGGTTGATA  42 60
 SCL_RS11125 NONE
 SCL_RS11120 NONE
 SCL_RS11115 2311886 .. 2311918 -  -2.5  -3.32819   GATATAGCCCGAGAA      CCACAGGCCATGGAT GAG AACGACGGCTTGGGG      TCTGGCGGCGGTTAT  45 37
 SCL_RS11110 2311249 .. 2311264 -    -6  -3.09492   CCGTCAAGTGTAACA              TCGGGC CCGG GCCCGC               CCCAACCGCGCGGAA  52 53
 SCL_RS11105 2310378 .. 2310426 -  -9.6   -2.7535   CTGTGGAATACATCA GGCTTACCCCTCTCCCCTTGC CCTCTCCC GCAAGGGGAGAGGGGGA-GTT AGTGAGAATCCTCAT  64 52
 SCL_RS11100 2309797 .. 2309814 -  -4.8  -2.78463   AGCCGGCCGATCACA             GCGGCA ACCTCA TGCCAC              GCCGGCCCGAGCGGC  45 3
 SCL_RS11095 2309109 .. 2309133 - -17.3  -3.36515   GGTGAGGCGGAAACA          GGTAAAGGTCC TGT GGACCTTTACC          CCGCCGAACGGGCGT 100 88
 SCL_RS11090 2307910 .. 2307935 -  -2.5   -3.5627   ATATTATCCGTGAAA         CCGCAGATAAAC GCA GATTAAC-GCGG         ATAAGAGTCAGTTCG  47 100
        ybgC NONE
        tolQ NONE
        tolR 2306360 .. 2306376 -  -2.2   -2.5092   TAACACGTTACCAAT             GGCTCCC GGAA AGG-GCC              TTCATCGCGGTGGCT  38 27
        tolA NONE
        tolB NONE
         pal 2303740 .. 2303751 -  -7.2  -3.08798   ATGCCCGATTTAATA                GCCG ATCT CGGC                 GCGGCGATTCTGACG  57 8
        ygbF 2302840 .. 2302854 -  -2.8  -2.69598   ATCGCCAGAAAAACC               GTGC GAGAAAA GCAC               AAAAGGGATACGCCG  40 113
 SCL_RS11050 NONE
        queC 2301369 .. 2301388 -  -4.4  -3.53091   ATGCCCGCTCCGAAA            TACGTGAAC CGC GTTCA-GTA            CCGCCCGGGACAACT  52 98
        tusD NONE
 SCL_RS11035 NONE
        dsrH 2300237 .. 2300252 - -11.8  -5.95539   CCTGAAATAAAAAAA              CCGGGC CCGC GCCCGG               TTGCGGTGTGCGCTT 100 52
 SCL_RS11020 2298578 .. 2298589 -  -5.8  -4.06055   ACCTGTCAAACCAAA                CTGC GCGG GCAG                 TGACTGCCGGGTGTG  65 46
 SCL_RS11015 2298394 .. 2298415 -  -3.7  -4.13246   GAGCTTATACAGAAA           TAGTGACTC AGCG AAGTCACGA            CGACAACACGATCAA  60 48
 SCL_RS11010 2297770 .. 2297791 -  -7.9  -3.96148   CTGCTCTACGAGAAA           CTGCCCGCC AAGG GGCGAGCAC            TCACGCTGCTGGCGA  71 26
 SCL_RS10955 2287403 .. 2287422 - -12.8  -5.89827   AACCAGCAAAAAAAA            GAGGCGCC ACAT GGCGCCCC             TTTTTCATCCGGTGT 100 155
 SCL_RS10950 2284872 .. 2284895 - -14.6   -4.8622   TTCTCGAAGCAAAAA          GAGGCCGGAT ATGT ATCCGGCCCC           CAGTTGGTTTACGGC 100 68
 SCL_RS10945 2283851 .. 2283872 - -14.5  -5.60993   CGGCTCATAAAAAAA           CAGACACGC CGAA GCGTGTCTG            TTTTGTCACGGAGTA 100 57
 SCL_RS10940 2282366 .. 2282380 -  -8.5  -3.75629   CACGCCCAACTCAAA               GCCGG ATCGG CCGGC               AAGCCCGGAGGCTGC  68 223
 SCL_RS10935 2281370 .. 2281391 -    -5   -3.6682   GGCCATGGACGTAAA           GGCGGGCG TTACTG CGCCGACC            GCTTTTCACAGTGTT  58 12
 SCL_RS10930 NONE
        mgtE 2279321 .. 2279342 -  -5.1   -4.2704   TTCACTACTAACAAA           TATGGCACA GCTC TGCGCCATG            GCAATGGCGCCCGGA  69 96
 SCL_RS10920 2278832 .. 2278848 - -10.8  -4.85782   GGGTGGAAAAACAAA              GCCGGC ATTGA GCCGGC              TTGTCGTGAGGCAGG 100 56
 SCL_RS10860 NONE
 SCL_RS10855 NONE
 SCL_RS10850 2265472 .. 2265482 -  -2.4  -4.65895   GTCGCTACGGAAAAA                 GGCC GAG GGCA                 AAACGCTGTGCAAAA  68 234
 SCL_RS10835 NONE
 SCL_RS10830 2261524 .. 2261558 -  -7.8  -2.71101   TTGCCAAATAATTCA    TGGGCAGGACGC-CG TTGTCC CGCGCGTCATGCCCC     TCCCGCCCCGCCCCC  55 17
 SCL_RS10825 NONE
 SCL_RS10820 2259099 .. 2259132 - -13.1  -5.06016   ACCACAGAAAGAAAA     GAACAAAGGGCCCGC GCGA GCGGGCCCTTTGCGG      TTGGCACAACCGGAA 100 42
         acs 2255833 .. 2255851 -  -3.9  -4.56597   TCGCTGCGGGAAAAA             TGAACAT CCTGT ATGTCCA             CCAGGACTTCACTGC  69 198
 SCL_RS10800 NONE
 SCL_RS10795 NONE
        mlaD NONE
 SCL_RS10785 NONE
 SCL_RS10780 2252791 .. 2252811 -  -3.3  -5.25656   AAAATCACTAAAAAA            TTCCAAGAT TTA ATCCTGTAA            ATCCTGCTAATCCTG  79 32
 SCL_RS10775 NONE
 SCL_RS10770 2250768 .. 2250785 -  -4.8  -2.91288   TAAGGGATAGGAAAC             CGCGGCG TGATG CGCCG-G             CCCGGCCCCGTTGAT  46 149
 SCL_RS10765 NONE
        grxD 2250067 .. 2250092 - -17.7  -5.40072   TTTGCCGCAAAAAAA         CAAAAGCCGCC AGCA GGCGGCTTTTG          TCCGGTCAATACGGC 100 47
        murA NONE
 SCL_RS10750 NONE
        hisD 2246712 .. 2246762 -  -7.1  -3.68302   CCAAGACGCCAAGAA CGCCAAGGAAAGC--GAGATTAAAA ACA TTTCAATCTCTTGGCGTCCTTGGCG TCTTGGCGGTTCAAA  62 41
 SCL_RS10740 2245591 .. 2245609 -    -3   -3.2058   CACCAATAATACATA             GACGAATC AGA GACACGCC             TCAAGCGCCTTGAGG  45 13
 SCL_RS10735 2244908 .. 2244928 -  -2.3  -2.90028   CGGATCACAAAACAT            CCTGGCGTC CTT GGCGCCTTG            GCGGTTAATAAATTA  40 41
 SCL_RS10730 2244110 .. 2244125 -  -3.9  -3.72051   TTCAAGAATTGGAAA              CCGCG GATGGA CGCAG               ATATTGAAACAAACT  53 102
        hisA NONE
 SCL_RS10720 NONE
 SCL_RS10715 NONE
 SCL_RS10710 NONE
 SCL_RS10705 2241345 .. 2241364 -    -5  -4.10161   CACCAGTTCGGAAAA            GC-CGACGT CGA ACATCGCGC            GTGACCGTGGCGGCG  65 48
        tatB NONE
        tatC 2239928 .. 2239970 -  -2.1  -3.14564   GTATGCCGTCAGCAA GATC-GGCAGAAAAAACGGC GTCC ACCATTTCTTCTCCATGATC ACGGCTCCCTGCGGA  42 166
 SCL_RS10690 2239228 .. 2239254 -  -2.2  -5.44119   TCGATGGCAAAAAAA         TCACCGAGGC GCGCGAG GCCTTGCTGA         ACATCTCCGGCCACA  90 186
        petA NONE
 SCL_RS10675 NONE
 SCL_RS10670 2235297 .. 2235310 -  -4.5  -2.89655   TGCTGCAAAAAAAGT               CCCTGG CTG CC-GGG               CGTGCGCCGCAACAA  46 41
 SCL_RS10665 NONE
 SCL_RS10660 2234081 .. 2234091 -  -2.4  -2.71144   CAGCGGCGTGAAGCA                 GGCG ATG CGCG                 CGCTATTTCACCACG  39 28
 SCL_RS10655 NONE
 SCL_RS10650 2232982 .. 2232995 -  -2.3  -3.39449   GGTTATTAACATTAA               CACCG CGCC CGGCA                TTTTTATTTTCAATG  45 220
 SCL_RS10645 2232666 .. 2232683 -  -4.1    -3.737   CAATGTGGCAGGAAA             CGGTG CGCCGTAT CACCG              CGTCCGCCTCGAACC  53 46
        lspA 2231613 .. 2231623 -    -4  -2.93435   GTAACTAGTCAGATA                 CTTT TAC AAAG                 GAGAATGAAATGCGT  44 510
 SCL_RS10625 NONE
 SCL_RS10620 2229626 .. 2229639 -  -5.2  -4.08767   GTCATTCCGGCAAAA               GCCG GAATGA CGGC                ATAAATTACTCCCGC  65 31
 SCL_RS10615 NONE
 SCL_RS10610 NONE
 SCL_RS10605 2226373 .. 2226418 - -12.5  -2.64912   CCGGGAATCGACAAG CAT-TTTCCCGGGTTCCGGCCC TTC GGGCCTGCACCCGGGCTACATG ATAAACCGGTCATGA  75 42
 SCL_RS10600 2225987 .. 2226000 -  -2.3  -2.77899   GCGCGCGAGGAATCA               TCCGC TTTT GCCGA                GGCGCCCGAGCACGC  39 9
 SCL_RS10595 2224677 .. 2224705 -  -5.2  -3.18849   GCGATACCATTAATA       CTTGGACCCCGGC TTTC GCCGGGGTG-ACG        ACAATTTTGGAATGA  52 45
 SCL_RS10590 2223674 .. 2223687 -  -3.7  -4.33582   TCGAATAAGAAATAA               GCGTC CTTT GTCGC                TCTTAAGAATCTAGT  64 372
 SCL_RS10585 2222736 .. 2222759 -  -6.6  -3.87994   AGTCACCGGCACAAA          CCCCGCCTGA TCCA TCAGGCGCCG           GTGATTTTCAGACTT  65 203
 SCL_RS10580 2220852 .. 2220863 -  -2.2  -3.67481   CTAGATATAAAGCAA                CTAG CGTG CCAG                 CCGGGCGCGGGTGGA  50 188
 SCL_RS10575 2219686 .. 2219700 -  -3.4   -2.8372   GATCGCGCACGAAAT               CCGCCG CGC CACCGG               CATGGGCATCTACAT  42 356
 SCL_RS10565 NONE
 SCL_RS10560 NONE
 SCL_RS10555 2213811 .. 2213822 -  -7.2  -3.05384   CGTGTGCTGACGGAA                CGCG CCTT CGCG                 GCATTGCGCGAGAAC  54 199
 SCL_RS10530 NONE
 SCL_RS10525 NONE
 SCL_RS10520 NONE
 SCL_RS10515 NONE
 SCL_RS10510 NONE
        hybD NONE
 SCL_RS10500 2202494 .. 2202513 - -16.4  -4.10552   GTGGATGAAACGAAA            CGGGCGGC CTTG GCCGCCCG             TTTTTTTTGCCTGGT 100 276
 SCL_RS10465 NONE
 SCL_RS10460 2195671 .. 2195683 -  -6.9  -2.58418   GTCTCAGAGAAAATC                CGCGA ACT CCGCG                CGGCGCCATTCGGCG  51 1
 SCL_RS10455 NONE
 SCL_RS10450 NONE
 SCL_RS10445 NONE
 SCL_RS10440 NONE
 SCL_RS10435 2191013 .. 2191047 -  -4.4  -3.32963   ATTTTTATTGGATAA    GAGATCGTGGCCCGGA TCATG TCCGAGCCA--ACCTC    ATGGCAAGCTGACTG  51 72
 SCL_RS10430 NONE
 SCL_RS10425 2187582 .. 2187620 -  -3.8  -4.77036   CGCCATGATCAAAAA  GGACAAGACGCTGGACA GCTGAT CGTCCA-CGCCCCGGCC   GCTGGCGTTAAAGCG  72 153
 SCL_RS10400 2181352 .. 2181371 - -10.8  -3.56821   AGTAGACGGCCTAAA            TGTCGCTT TATA AAGCGACA             AAGTACTGTATATCC  74 236
 SCL_RS10395 2180974 .. 2180997 - -18.2   -4.2704   TCCACCAGCAAGAAA          CCCCTGACCG GCAA CGGTCAGGGG           TTTTTGTTTTATTGG 100 120
 SCL_RS10385 NONE
 SCL_RS10380 NONE
 SCL_RS10375 NONE
 SCL_RS10370 NONE
 SCL_RS10365 NONE
 SCL_RS10360 NONE
 SCL_RS10355 2172547 .. 2172557 -  -4.6  -4.92756   ATGAGCAAAAAGAAA                 GACG ATA CGCC                 CAATCCCGTCATCGC  80 482
 SCL_RS10345 NONE
 SCL_RS10340 NONE
 SCL_RS10335 2170079 .. 2170095 -  -4.3  -5.30155   GCAGCAAGGAAAAAA              CCGGCGA GAC TCAGCGG              TTGACGCTGATTTTC  88 111
 SCL_RS10325 2169017 .. 2169029 -  -9.1  -4.09685   GTTCAGCGGGGAAAA                GGTCC ACC GGACC                ATTTCCTGTTTCCGC  80 86
 SCL_RS10285 NONE
 SCL_RS10280 NONE
 SCL_RS10275 2158426 .. 2158464 -    -6  -3.71917   ACCTCAAATGGCAAA  GGCACAGT-GGCCAACC TTCCCC GATCGCCCCACCGTGCC   TTCGTTCGCCAATGC  60 48
        dnaJ 2157020 .. 2157032 -  -4.8  -3.74345   ACGTATACACCCAAA                CTGC TGCAT GCAG                ATTATGCGATAACTC  55 243
 SCL_RS10265 2156017 .. 2156033 -  -4.4  -2.72807   AGAAAACTGAAACAT             GC-CGAG GCAT CTCGCGC              CCGGATAGCACGAGA  45 61
 SCL_RS10260 NONE
 SCL_RS10255 2154781 .. 2154803 -  -2.6  -3.72087   AGCAAGCGAATACAA           GCAAAGTACG GCG CGCATATTGC           GATCCTGATACCGGC  50 89
 SCL_RS10250 2153855 .. 2153885 -  -2.4  -4.82901   CGGTGCGGACAAAAA      GGGGCAGCC-GGC ACGCAG GCCAGGCCGCCAT       CAGCCCAAAGTATAT  68 175
 SCL_RS10245 2152630 .. 2152644 -  -2.7  -2.54617   GAGGGCAAAAACTAT               CGCGG CATTC CCGGG               CGGCAGCCTGCCGCC  40 62
 SCL_RS10240 NONE
 SCL_RS10235 NONE
 SCL_RS10230 NONE
 SCL_RS10225 NONE
 SCL_RS10220 2147803 .. 2147829 -  -8.6  -3.53012   GCGTGCCGCTGGAAA         CCGTGCGCGTGG ACC CGACACGCATGG         CGCAGGGCATCATGA  63 510
 SCL_RS10210 2145543 .. 2145579 - -10.1  -4.84359   GCAGGCGCACAAAAA   CGGGAGAGGCGC-CCG CTGCTC CGGTGCTTCTCTCCCG    CCTTGAATGCCTAAA 100 138
 SCL_RS10205 NONE
        carB NONE
 SCL_RS10195 2140440 .. 2140475 -  -8.8  -3.07013   GAGCTGCTCAAGATA    CGTCTGCCGGGCGTGG AGCG CGACGCGCGGCACGCG     CTGCTGCAACAAGTC  57 148
 SCL_RS10185 2139531 .. 2139545 -    -7  -3.45366   CTCTTAATCAAGTAA               CGGCGG ATT CCGGCG               CCCGTCATCCACTAT  58 83
 SCL_RS10180 NONE
        folP NONE
 SCL_RS10170 2135236 .. 2135246 -  -5.4  -2.61681   TTGCAATTTTATAAG                 GGTT TTA AACC                 GCCAAGACGCCAAGA  46 168
 SCL_RS10165 NONE
 SCL_RS10160 NONE
 SCL_RS10155 2133840 .. 2133852 - -10.5  -3.33815   AGCGCGCGCAAGCAA                CGCGC CGT GCGCG                CCAGGAAAAAATTAA  73 41
 SCL_RS10150 2133201 .. 2133235 -  -9.2  -2.98823   GCCCTGCGAGACAGA     TGCGAATTGGTGTCGG CGG CCAGCGCCAATTCGCC     GGTCGCATCCCGGCG  62 76
 SCL_RS10145 NONE
 SCL_RS10140 NONE
 SCL_RS10135 NONE
 SCL_RS10130 NONE
 SCL_RS10125 NONE
 SCL_RS10120 NONE
 SCL_RS10115 2125515 .. 2125525 -  -2.4  -4.20368   TCAGTGGAAGACAAA                 CCCC CAG GGCG                 TAAGAAACATGACGC  56 0
 SCL_RS10110 2124917 .. 2124927 -    -4  -2.71765   AGAGCGCAAAGGAAG                 TTGA AAA TCAA                 AAACAAAATCTGTTG  43 88
 SCL_RS10105 NONE
 SCL_RS10100 NONE
 SCL_RS10095 NONE
 SCL_RS10090 NONE
 SCL_RS10085 2118971 .. 2119013 - -18.1  -3.15544   CCTGAGTTTCAGGAA CACCAAAACAAAAAAGCCCC ATAC GGGGCTTTTTTGTTTTG-CG CCGCATCGAGATTCA 100 38
 SCL_RS10075 NONE
 SCL_RS10065 NONE
 SCL_RS10060 2114373 .. 2114390 -  -5.5  -3.09759   AATATAGGTACTTAA             CCGATCA CTAA TGTTCGG              TTTTATGACGACGGC  50 58
 SCL_RS10055 2114211 .. 2114225 - -12.8  -5.08088   AATCCGGAATAAAAA               GGCCCC GGA GGGGCC               GAATCACAAAATTGG 100 38
 SCL_RS10050 2113625 .. 2113636 -  -3.6  -3.28712   GCCCGCCGTTCAGAA                CCGG GGCA CCAG                 TCGTGCCCGCTCCAT  47 8
        nusA 2112082 .. 2112096 -  -4.2  -4.08767   TCGAGTCCCTGAAAA               CGGG CGCTTAT CCCG               CCTGCTGGCCCTCGA  62 18
 SCL_RS10040 2109461 .. 2109477 -  -2.9  -3.66787   GGAAATTACAGATAA              GCAGAAA ATT TATCCGC              GTTACAGGAAAATTA  51 38
 SCL_RS10035 2108983 .. 2109041 - -15.9  -3.18849   TTCACAGGATTAACA GGATTGTTCAGGATTTACAGGATT AAGGATTTCAAA AATCCTGTAAATCCTGAACAAT-C CTGTTTATTTGCTTT 100 30
 SCL_RS10030 2107979 .. 2108006 -  -6.2  -3.06261   CCTCAACCGCCAATA        TCGGGTCCGAACG CGC CGTACGGACC-GC        CTGTTTCATGCCTGT  52 42
 SCL_RS10025 2107529 .. 2107586 -  -6.3   -2.9914   GAGTTGCCACAGAGA TCACAGAGGTCACAGAGTTAAAAACTG TTTT CTTTTTCTATCTCGGTGTTCTCTGTGA TCTCTGTGGCTAAAG  51 64
         pnp 2105341 .. 2105356 - -10.4  -5.29782   TACAGGCATAAAAAA              GGGAGC CGAA GCTCCC               TTTTTTATTGCTTAA 100 52
 SCL_RS10015 2104659 .. 2104685 - -14.4  -2.67423   CGTAATAATATCAAT         CGCATGGCGCGT GGT ACGCGCCCTACG         TTAGCCAAGCGAGAT  81 68
 SCL_RS10005 NONE
 SCL_RS10000 2100306 .. 2100330 -  -7.3  -2.78762   ACAGGATTAACAGGA          TTTACAGGATT AAA AATCTTGTAAA          CAAAAATCCTGTTAG  55 71
 SCL_RS09990 2098120 .. 2098149 -  -4.9  -3.44146   GTCGGTCATAACGAA       CGAATCAAGCGGC TTTG GCGGCCTGCTTCA        GCAGATCAGCCACGC  51 0
 SCL_RS09985 NONE
        trmD NONE
 SCL_RS09975 2096421 .. 2096450 - -15.1  -4.77165   GGGGTGACAACAAAA       TAAAAAGCCGCCC TTTC GGGCGGCTTTTTT        ATTCAAACCCTGGAT 100 67
 SCL_RS09970 NONE
 SCL_RS09965 2094025 .. 2094063 - -10.3  -3.93719   AGAACCACATAACAA  TCGGTTCCAGGCGACCGGC TAC GCCGG-CGCATG-AACCGG  GGCGTTAGCTAAAAC  83 309
 SCL_RS09945 2087514 .. 2087527 -  -5.9  -3.53012   CGCCGGCGGCGCAAA               CCGGC GCCA GCCAG                CCAAGGCCCAGCACC  57 75
        dacB 2086110 .. 2086124 -  -4.2    -3.484   TTGACCATATCATAA               CGGG TGTCCAG CCCG               GAACTCAGGGCCGCT  52 30
        gltA 2084752 .. 2084763 -  -7.2  -2.67425   CAGATAACCGATAAC                CCGC CCGA GCGG                 CATGGACGGCGTTAT  54 37
 SCL_RS09930 2084233 .. 2084252 - -12.1  -4.72986   GAGGCCTACGAAAAA            CGCCGCG AATTGA CGCGGCG             TTTCCTGAAAAAATA 100 79
 SCL_RS09920 2082540 .. 2082558 - -11.6  -3.67417   ATATGGAACCTGAAA             CCGCCCGC CCT GCGGTCGG             GGCTGGCGCGAAAAC  79 155
 SCL_RS09915 2082250 .. 2082269 - -10.7  -5.06414   GGGTTGCAATAAAAA            GCCCCGT ACAAGG ACGGGGC             CGGAAAACAAGTTAC 100 62
 SCL_RS09910 2081381 .. 2081401 -  -7.5  -4.59109   GACATCGTGGAAAAA            TTCCTGGCG ACA CACCCGGAA            TTTCATGTGGTTCCG  83 246
 SCL_RS09895 2078877 .. 2078901 - -12.2  -5.63517   GGCCCAAATAAAAAA          CGGGAAGGCT GTAAA AACCTTCCCG          TTCTGAATTGACTGA 100 58
 SCL_RS09885 2076385 .. 2076404 -    -7  -2.60244   TCCGGAAGCAACTGA            GCTGCACG GAGC CGCGCCGC             AGCGTCGACAGTCCG  51 42
 SCL_RS09855 NONE
 SCL_RS09850 2067493 .. 2067513 -  -6.7  -3.83205   AGCCTCGACATGAAA            GTCGTCGCC GAA GGCGTCGAA            ACCCGGGAACAATTC  65 419
 SCL_RS09835 NONE
 SCL_RS09830 2062226 .. 2062245 -  -3.4  -3.29263   AGATGCGTGGGACAA            GCTCGTCG CCGG CGCCGATC             TGGTCCAGATATACA  46 280
 SCL_RS09805 2056190 .. 2056215 - -13.3  -2.98592   TGAAGTGAAAAACAG         GCAACCC-GCGC CCT GCGCTGGGTCGC         GGCAGAGGCAACGGG  81 46
        ilvD 2054274 .. 2054302 -  -5.9  -3.75629   TATTCGTAACCGAAA        TAGCTGGCGCCGA CCA TGAGCGCCATCCA        CACGACAATGACGAA  60 145
 SCL_RS09795 2053040 .. 2053059 -    -7  -2.76261   TGCCAAGGCCTAAAC            CGGCGCGA AAAA CCGCGCAG             ACAAGGCCCATATCG  52 0
 SCL_RS09785 2051610 .. 2051640 -  -5.2  -4.07568   TCCCTGCCGGCAAAA       CCGGATGCATCGCC GTT GTCGGCGCAACCGA       CCGAGGCCTTCCGGG  63 255
 SCL_RS09775 2049559 .. 2049569 -  -2.4  -4.63527   CGATGAGCGCAAAAA                 GCGC ATC GAGC                 CTGCCTTATGCCAGT  65 148
 SCL_RS09770 NONE
 SCL_RS09765 2046277 .. 2046295 -   -16  -4.90525   GAATTTGAAACAAAA             TCGGGGCC AAA GGCCCCGA             AAAACACAGGAAAAC 100 51
 SCL_RS09760 NONE
 SCL_RS09755 2042930 .. 2042946 -  -4.4  -5.00616   CCCGGGCGGAAAAAA              TCCTGC GTCAG GCAGAA              ACGGCGGCGGCGGTA  81 344
 SCL_RS09745 2040812 .. 2040837 - -11.9  -3.02829   GAGACTGCGCGAATA         CCGCCGGTTCCT GTG AAGA-CCGGCGG         CGCGAGAAGCTATGG  76 35
 SCL_RS09735 2039239 .. 2039272 - -14.1  -2.57757   AACGAAGGGAAGGTA     TTGCCGGTAAAA-AGC AAT GCCATTTTACCGGCAA     ACAAGCAACCGATCA  81 94
 SCL_RS09730 2038388 .. 2038411 -  -4.5  -4.56597   CTCGTGGTGGAAAAA          GACGGCCTG CGGTAC CAGGCGATC           CGCCGCACCAGCAGA  72 458
 SCL_RS09690 2031311 .. 2031324 -  -9.5  -2.92246   GCAACCTGAAGGATA               GCGGC GAGT GCCGC                AGCAGGAGGGGGATG  65 303
 SCL_RS09680 NONE
        clpA 2028350 .. 2028375 - -20.5   -5.4505   TTCCTGAATAAAAAA         CGCCGGCGCAT TCGC ATGCGCCGGCG          TTGTTGTTGCTGCCG 100 46
 SCL_RS09625 2017605 .. 2017629 -  -4.1  -3.98658   ACGCCAGTAAAAATA          TGCGCCGGCGC CGA GCGCCATGACA          ATCGCCGCTGCCAAT  58 75
 SCL_RS09620 NONE
 SCL_RS09615 2014703 .. 2014749 -  -3.1  -3.74238   TTAAATAAGCTGAAA CCA-CCAGGGACGATGATGTGC AATTTA GCACATCA-CG-CGCAGGCTGG ACTATTCGTAACGCA  51 27
 SCL_RS09610 NONE
 SCL_RS09605 NONE
 SCL_RS09600 NONE
 SCL_RS09595 2010292 .. 2010314 -  -5.6  -3.35522   CAACCGCGCCAAATA          TGCGCTGGA GAATTA TCC-GCGCA           CGCCGTCGACGGAAG  52 173
 SCL_RS09585 2008558 .. 2008586 -  -6.7  -4.44548   GAGAGGGAATTAAAA        GTCAAAAGCCGCC TAA GATGGCTTTTGAT        CATTCACTACCTGGA  75 82
 SCL_RS09580 NONE
 SCL_RS09575 2006638 .. 2006658 -  -7.7  -4.32201   CCAAGGAAGCTAAAA            TAGCATATT CCG AATATGCCA            AAATGCATAGATAGC  77 201
 SCL_RS09570 NONE
 SCL_RS09565 2005832 .. 2005850 - -17.4  -5.38054   GCCTAGAAAGAAAAA             CCCCGCCG GTG CGGCGGGG             TTCCATTCCGTGGCC 100 40
 SCL_RS09560 2004006 .. 2004016 -  -6.8   -3.2396   AACCAGCATGATCAA                 CCGA TAG TCGG                 TGAATAACGGCAGCC  56 70
 SCL_RS09555 2003277 .. 2003306 - -19.4  -4.39166   TGGCAGATATGAAAA       CGGCACCCAGCT TACAAC AGCTGGGTGCCG        CCGTGATACGACAGC 100 48
 SCL_RS09550 NONE
 SCL_RS09545 2000431 .. 2000449 -  -6.6  -3.06737   GACGAAGGCTCAATA             CGAACCCC GCG GGGACCCG             AGACGAACGCGATCC  54 63
 SCL_RS09540 1998611 .. 1998632 -  -6.6  -2.53995   ATGCATCGGAACGGA           TGACGCCGG TTAAT CCGGCGT-A           CCGTCGGCAACCACG  51 13
 SCL_RS09520 1995415 .. 1995428 -  -4.5  -4.18494   CAGTTCTACTTAAAA               CCGCT TGGG AGCAG                TATGGCGGACCGGGT  62 40
 SCL_RS09515 NONE
 SCL_RS09510 NONE
 SCL_RS09505 1990477 .. 1990493 -  -3.5  -2.50471   GAAATACGGAAAAGT              TCAGCGC GCG GCGCGGT              CGGTTGCCACGGCCT  42 9
 SCL_RS09500 1988629 .. 1988642 -  -4.5  -4.07568   GCTGCTCGCCCAAAA               TCCGC GGAC ACGGA                TCGTGACGATCGAGG  61 304
        hrpB 1984762 .. 1984796 -  -8.6  -4.18018   CGCCCGCACGCAAAA    CGAGGTGCGC-AAGA ACGATA CCTTCGCGCGCCTCG     GCGGCGACGAGTTCG  76 419
 SCL_RS09480 1983192 .. 1983206 -  -2.7  -2.55351   CCTTGTCAGATGAAG               GGCGG GATGT CCGGC               GTCTTGTGGCGGGCT  40 101
 SCL_RS09475 1982381 .. 1982418 - -14.9   -3.1733   TGCGGCAGAAAAGCA   TTCGGCGGGTTACGCGCC TGC GGCGC-TAACCCGCCCTA   CATTTGATTAGCCGG  95 74
 SCL_RS09465 1980961 .. 1980980 -    -5  -3.56821   AGTAGACGGCCTAAA            TGTCGTTT TATA AAGCGACA             TAATACTGTATATCC  55 162
 SCL_RS09460 NONE
 SCL_RS09455 1979196 .. 1979217 -  -4.5   -3.9461   CGGCTCGAATAAGAA           GTTAG-GCAT TGA ATGCTCCAAC           TTTCCACGCTATTCC  60 5
 SCL_RS09450 NONE
 SCL_RS09445 1978081 .. 1978093 -  -4.1  -2.81133   CACTGATTCAGTATA                TGCAC TAT ATGCA                TACACCGCAAGTAAA  43 55
 SCL_RS09440 NONE
 SCL_RS09435 1977121 .. 1977147 -    -6   -4.3534   CTCCAACGACCAAAA         TCATAAAATACA ACC CGTATTTTGTGA         TACTGACGATCAATC  71 394
 SCL_RS09425 1974544 .. 1974560 - -15.1  -4.51224   AACAGGAATAACAAA              GCCGCCC GCC GGGCGGC              TTTTCTTTTTCTCCC 100 87
 SCL_RS09420 1973790 .. 1973811 - -14.5   -5.0133   CAGGTTGTCAAAAAA           TATGCCCGC GCAA GCGGGCATA            TTTTTTTCAGGGAAC 100 72
 SCL_RS09400 1969675 .. 1969725 - -6.99999  -2.52464   TGTCTCCTCAATGGA TGGTTG-ATGGTCCACCCGGACGCGC GAC GCGCGTCCGGGTG--CCGTGCTAC-A TGCCGATCAGGCGCG  51 21
 SCL_RS09395 1968734 .. 1968752 -  -8.8  -3.65656   CCATCAGATACATAA             TGACCGGC ACG GCCAGCCA             CAGCAGGCCCTTCAC  70 168
 SCL_RS09390 1967986 .. 1967999 -  -4.5  -4.43681   GACCGAAGATGAAAA               CGACG CCAT CATCG                TCCGCTCCACCGTCG  69 233
 SCL_RS09355 NONE
 SCL_RS09350 NONE
 SCL_RS09345 1955013 .. 1955026 -  -3.1  -4.41616   ATCCCTTGAAATAAA               CTCTA TAGC CAGAG                ACAGGGCCAAGATAT  64 331
 SCL_RS09340 NONE
 SCL_RS09335 1953090 .. 1953100 -  -2.4  -4.67982   TGGTAGCGAAGAAAA                 TGGC CGG GCCC                 GTGGTACGACGCACC  72 222
        leuC NONE
        leuD NONE
        leuB 1948663 .. 1948683 - -13.9  -3.56836   AAATTATTCGTTAAA            GCGCCGCCG CCA CGGCGTCGC            CCATTTCTTTCGTTC  89 0
         asd 1947356 .. 1947367 -  -2.2  -4.08064   AATTTGGCTGGAAAA                TGAG GCTA CCCA                 CCCGTTTGGCGGCCA  56 175
 SCL_RS09300 1944277 .. 1944293 - -15.1  -6.07374   ACAAAAAACAAAAAA              GGCGGGC CAA GCCCGCC              TTTTTTGTTACGAAT 100 54
 SCL_RS09260 NONE
 SCL_RS09255 1937844 .. 1937856 -  -4.8  -3.53811   CGGAGCCTTCGCAAA                CGTC TAGTG GACG                TTTGCGCCGCCGAAC  52 63
 SCL_RS09250 NONE
 SCL_RS09245 1937474 .. 1937492 -  -8.8  -2.89177   ATCGGACACAGTATA             GCGCCAAG CTG CCTGACGC             CGGCCAGACAGGCTC  62 129
 SCL_RS09240 NONE
 SCL_RS09235 NONE
        clpP 1935157 .. 1935170 -  -3.7  -3.91716   TTATGCCGCAAAGAA               TGCGG GTTT CCGCC                ACCCTTTGCAAGTAA  56 124
 SCL_RS09225 1933764 .. 1933787 - -16.8  -5.24531   ACTGCTCATAAAAAA          GAAACCCCGC GTTG GCGGGGTTTC           TTTTTTTGGGTCTGT 100 49
 SCL_RS09220 1931075 .. 1931118 -  -8.1  -4.15788   AACCTTGTCAAGAAA GATATACACGGCGCGGTTT ATCAAA ACACCGCGTCGCGGACATC AGAGACAACAGGTAC  77 84
 SCL_RS09215 1930656 .. 1930671 -    -6  -3.38046   CCCGGAGGCGAAAGA              CCCCCC AAAA GGGCGG               CTAGTTTAAGGCATC  56 26
 SCL_RS09210 NONE
 SCL_RS09205 1930446 .. 1930467 - -13.7  -4.08485   CCGACCCAAACGAAA           GGGCGAGGA ATGA CCCTCGCCC            GGTATACGATTGTAG 100 41
 SCL_RS09200 1928312 .. 1928330 -    -8  -3.01791   ATGGCGGCTTCAACA             CCGTGGCC ATC GGCCTCGA             TTACGCCAAGCTGCT  60 193
 SCL_RS09190 NONE
 SCL_RS09185 NONE
 SCL_RS09180 NONE
 SCL_RS09175 1920642 .. 1920684 -  -9.1  -3.16055   GAAAGCTCTGATCAA GTTTCCCGTTCGCCCTGAG CTTGT CGAAGGGTGAACGGGAAAT TCCGTAAATTGGAAA  65 99
 SCL_RS09160 NONE
 SCL_RS09155 1916855 .. 1916870 -  -4.8   -2.6627   CTAAGGTAGGACAAC              TGTTAT TAAA ATAACA               TCGCTGATATTTAGG  44 47
 SCL_RS09150 1916196 .. 1916207 -    -3  -2.91657   ATCAAAATAAAAAGG                TCAA CCTG TTGA                 TGCATACAAACTATC  42 40
 SCL_RS09145 1915348 .. 1915384 - -10.1  -3.91911   GTCATTCCAACGAAA    GCCGGAATCCAGACTAT TTA ATTAACTGGATGCCGGC    CTCCGCCGGCATGAC  76 49
 SCL_RS09140 NONE
 SCL_RS09135 1913524 .. 1913579 -  -9.3  -3.15231   AAAGAAAATTAGACA GGATTTACAGGATTAACAGGATTCC TGTTTC GCAATATTTTTAATCCTGTAAATCC TGTTAATCCTGTCCA  63 86
 SCL_RS09130 1913234 .. 1913246 -  -6.2  -2.95274   ATCAAACAGACGATA                GCCG TTCGG CGGC                GAAATCAGGCCTCCC  51 30
 SCL_RS09125 1912548 .. 1912575 - -14.2  -4.18018   GTGCCTGACCCAAAA        TACAAAGGGCCC GCAA GGGCCCTTTGTC         ATTCCTCGTCCGACG 100 44
 SCL_RS09105 NONE
 SCL_RS09100 1904118 .. 1904128 -  -4.6   -3.1247   ACGCTGCACATCGAA                 GCAC TGC GCGC                 GGATCAGCAGCGGCA  48 228
 SCL_RS09065 1898896 .. 1898934 -  -7.3  -2.78463   ATGGTCGCCAGCATA  CTCGGCGTGCGCCGGGAA GGCA TTACCGAGGC-CGCCGGG   AAATTGCAGCGCGCC  52 219
 SCL_RS09025 NONE
 SCL_RS09020 NONE
 SCL_RS09015 NONE
 SCL_RS09010 1878277 .. 1878296 -    -5  -3.14284   TGCTCATCAAGAAAT            GCGTTG TCTTGTTG CAACGC             TTGGTCAGTTACGCA  50 66
 SCL_RS09005 NONE
 SCL_RS09000 NONE
 SCL_RS08995 1874524 .. 1874570 -  -2.9  -4.08706   GCTGGAGCACAGAAA GGCTAGGCGCGTCGACCACAAC GGTC GGTACGATGG-CGCACATAGCC TGGGGTCATACCTCT  58 46
 SCL_RS08990 1872738 .. 1872750 -  -6.9  -3.62255   GGCAATAATAATGAA                CCCGG GAA CCAGG                CGGGTCTGTTCGATA  62 46
 SCL_RS08985 NONE
 SCL_RS08980 1870246 .. 1870256 -  -8.2  -3.53811   TTCATTCCGCGTAAA                 GCGC ATG GCGC                 TGCCGCAACGGGACT  65 1
 SCL_RS08915 NONE
 SCL_RS08910 1851163 .. 1851177 -  -2.1  -3.05819   GAGACATCCCCAATA              TGCCGG ATAT CCGG-A               GCAACAAGCTTCGTC  42 55
 SCL_RS08905 1850469 .. 1850503 -  -5.7  -2.73364   GGCGCACTTGAATCA    TGC-GCCGCTG-CAAGC CTC GCTTGTCTGCGCCAGCA    CCGCCCTTCACCGCA  50 43
 SCL_RS08895 1848841 .. 1848852 -  -5.8  -4.03234   GGCCCTTTAGATAAA                CCCT TTCT AGGG                 TTGTTGAACCGACGT  65 20
 SCL_RS08890 NONE
 SCL_RS08885 NONE
 SCL_RS08880 NONE
 SCL_RS08875 NONE
 SCL_RS08870 1845797 .. 1845823 -  -5.2  -3.36569   TGAATCGGGGAAATA         CCGGAATC GGGGGCAGGAG GATTCCGG         AATTAACTCAATATG  53 90
 SCL_RS08865 NONE
 SCL_RS08860 1843462 .. 1843481 -    -2  -3.59233   CAACGATGAAATTAA            CGCGAC GATACTGG GGCGCG             ACTTTGCCCGGCAAA  49 293
 SCL_RS08850 1841301 .. 1841314 -  -5.2   -3.7282   CGATGCGATGAATAA               CGGC GTGTTT GCCG                TGCAAATCACATGGA  58 382
 SCL_RS08845 NONE
 SCL_RS08840 1840565 .. 1840588 - -12.4  -4.96848   CGTCGCACACAAAAA          GGGCCCG-GCA TAT CGCACGGGCCC          TTCAGGATTTTACAC 100 338
 SCL_RS08835 1837247 .. 1837272 -    -4  -3.91911   TGTATTCCAACTAAA         GCGCGTTTAC TGCACC GTAAACGAAC          TCGCCGTAAACGCCA  56 6
 SCL_RS08810 1830688 .. 1830700 -  -5.5  -3.71848   GCCCCGCAGCAAGAA                GCCGT GGC ACAGC                TACTGAAGACACGTG  60 443
 SCL_RS08795 1825692 .. 1825702 -  -2.4  -4.49337   CAACAGCAATCAAAA                 CTCG GGG CGTG                 ATTATCCCGGACCGG  65 147
 SCL_RS08785 1823087 .. 1823112 -  -7.5  -4.07568   CCTTTCCCCCCAAAA         CCTTCGGTGCG CTGT CGCACATAAGG          CTGGCAAAAACAACG  74 111
 SCL_RS08780 1822671 .. 1822699 -  -5.3  -2.62184   GCGGTCTGGATATCA        CGCTTCACTGG CTGATCT CCAGTGAAGTA        TTAACGCTTTGCGAC  46 26
 SCL_RS08775 NONE
 SCL_RS08770 NONE
 SCL_RS08765 1821361 .. 1821374 -  -3.1  -3.57971   ATATTCACGTCCAAA               GTCAGC GAC GC-GAC               TGAAGCAGACGGTGG  49 107
 SCL_RS08760 1820738 .. 1820749 -  -3.6  -2.52464   CGGCCGCTGAACCCA                CGGA AATG CCCG                 AGTGGCGACTGCCAT  42 51
 SCL_RS08755 NONE
 SCL_RS08750 NONE
 SCL_RS08745 1815964 .. 1815979 -  -6.1  -3.35679   TTTTCCGATGGACAA              GGCGA TCTCGC TCGCC               ATTCTGGCCGCAGGA  52 445
 SCL_RS08705 1810450 .. 1810466 - -13.7  -5.44119   CCTATTGCAAAAAAA              GCCCTGC ATC GCAGGGC              CTAAGGGGGGTCATT 100 170
 SCL_RS08700 1808938 .. 1808950 -  -9.1  -5.31275   TTTCACCACAAAAAA                CCTGC GAT GCAGG                GCTTAAGAGGGGTCA 100 121
 SCL_RS08695 1807741 .. 1807758 - -11.3  -5.02502   CAGACCACAGAAAAA             GACCGTC TTGC GACGGTC              TTTTGTCCTGCTTTT 100 84
 SCL_RS08680 NONE
 SCL_RS08675 NONE
 SCL_RS08670 1803648 .. 1803668 -  -3.1  -2.94825   CTATGTTAATGAAAT            TCCGGCCGC CGT GCATCCTGA            GATCAGTCGTCCTCC  42 28
 SCL_RS08665 NONE
 SCL_RS08660 1802042 .. 1802061 -    -5  -5.55855   CTGAAAAAAACAAAA            GGGTTG TCCGCACG CAACCC             CTTGTGTGAAATGGT 100 37
 SCL_RS08655 1801904 .. 1801930 - -15.8  -6.28967   CAGAAACAAAAAAAA         GGGGGCCCGCAA AAA TCGCGGGTCCCC         TTTTTGATTCTGGCG 100 36
 SCL_RS08650 1801075 .. 1801091 -  -7.9  -5.65927   CATCCAAACAAAAAA              GCCGGGT TAA AGCCGGC              TTTTTTTGTTTGGCG 100 146
 SCL_RS08600 1785712 .. 1785737 -  -3.1  -2.75022   GGGCGGAGACACAAT         GTCATGCG-GGC GAG GCCTCGCGCGCC         TCCTGGCGGGTGGAA  41 1
 SCL_RS08595 1785226 .. 1785250 -  -7.9  -2.88663   ACTTATTTTGAGATA          GCTTCTGGC TCATTTC GCCAGAAAC          ACAATCCCCTGCAGC  56 10
 SCL_RS08590 1783843 .. 1783857 -  -5.6  -2.73771   CCACCAGATAGATGA               GCAGGG TTT CCATGC               GTCAGTTTCCGGCCA  47 27
 SCL_RS08585 1783039 .. 1783065 -  -2.1  -3.50853   TGCGCGCAAGGATAA        CGCGACAGCCGC TTCG GCGACAGGC-CG         CTTATCCAATTAACA  47 27
 SCL_RS08580 1782332 .. 1782342 -  -2.4  -3.73402   ACAGTTCCCATCAAA                 TGGC CTA GCCC                 CGCGCGGACTCCGCC  50 228
        recA NONE
 SCL_RS08570 1780626 .. 1780683 -  -4.8  -3.07005   AATTAACCGCCAAGA CGCCAAGAACGCCAAGGATTCGAATT CCCAAT AATTGCTTTTCTTGGCGGCCTTGGCG CCTTGGCGGTTCAGA  47 70
 SCL_RS08565 1777927 .. 1777945 -  -5.2  -4.05788   GGGGCGCAAATTAAA             CCCGCTTT TGG AACGCGAG             TAAACAGCCCGTAAG  63 60
 SCL_RS08560 1776490 .. 1776519 - -10.1  -2.53263   CTGAGTGCTAACTTA       CGGATATCGCAGGA AAA TCCTGCC-TATCCG       TCCGTCTTCGCCTGC  63 96
        csrA 1776032 .. 1776052 -  -3.2  -3.53811   CTCACGGCGCGTAAA            GCAAAACC CCGGC GGTTCAGC            CTTTGCCGCTGCCGT  49 21
 SCL_RS08550 1775845 .. 1775858 -  -5.9  -4.90013   GAATGGAATGAAAAA               GGCCG GATT CAGCC                TCAGGGGGAACAAAA  83 56
 SCL_RS08545 1775670 .. 1775700 -  -9.1  -5.09426   CTCAACGGCAAAAAA       CAAAAAAGAGGGC TTGCC GCCCCCTTTTTTT       TATATTTATATGGCG 100 36
 SCL_RS08540 1773762 .. 1773779 -  -3.3  -4.15044   TTGGCTGGGAAGAAA             GCATGGA CAGT CCCTTGC              GAGTCAGCCTGGTCC  61 257
 SCL_RS08530 1772786 .. 1772803 -    -7  -3.27215   AAACCGGTAGATCAA             TCACCG ATAAAA CGGTGA              TGCAGCATCCTGTCC  56 112
 SCL_RS08525 NONE
 SCL_RS08520 NONE
 SCL_RS08515 NONE
 SCL_RS08510 NONE
 SCL_RS08505 1766852 .. 1766862 -  -4.6  -2.62184   CCTGTCCCGACACGA                 CGAG ATC CCCG                 GCCACGGACCGATAC  44 256
 SCL_RS08500 1765691 .. 1765720 -   -10  -2.80816   CGGCCACTGACGACA       TTGCG-GCACCGG CAAAT CCGGAGCCCGCAA       AAGGGCAAGGCAGGC  64 96
 SCL_RS08495 1764117 .. 1764127 -  -4.6  -3.28924   TATTTGTTCGTATAA                 CGCG ATT CGCA                 ACAGTTGCATTCTTT  49 101
 SCL_RS08490 NONE
 SCL_RS08485 NONE
 SCL_RS08480 1761223 .. 1761233 -  -3.2  -2.80816   TCGGGATTCATCATA                 TGGC TTG ACCA                 TTACTCCAGTATAGA  41 53
        rfbG 1760123 .. 1760133 -  -2.4  -3.43756   TATGGGATGAAAAAT                 CACG TCG CGGG                 TGATGCCGTTAATTA  45 34
 SCL_RS08470 1759524 .. 1759541 -  -4.1  -3.29325   GGGTCAGAAGCAACA             CGTC-CGA GCT CCGCGACG             GCGCGGTGTCAACCC  47 76
 SCL_RS08465 1758629 .. 1758645 -  -2.1  -2.72799   CGGGCACACATATCA              CCACCGG CAT CTAGCGG              CCGATTCCGAAGAGT  39 19
 SCL_RS08460 1757198 .. 1757208 -  -2.4  -4.09685   TCTGATTCGGCAAAA                 TCCG GTC CGGG                 CTGGCTCAAACTGCC  56 110
 SCL_RS08455 NONE
 SCL_RS08450 NONE
 SCL_RS08445 NONE
 SCL_RS08440 NONE
 SCL_RS08435 NONE
        asnB NONE
 SCL_RS08425 NONE
 SCL_RS08420 1746579 .. 1746604 -  -6.1  -3.65738   ACGAAATAATGATAA         GCCGCAACC-GT GAT ACAGGCCACGGC         GAGTGCGTCAGAAAT  60 97
 SCL_RS08415 NONE
 SCL_RS08410 NONE
 SCL_RS08405 1743059 .. 1743071 -  -9.1  -4.08216   GGATGGTTGCGAAAA                GCTGC CCT GCAGC                ACTTTCGTCCGGCGA  80 54
 SCL_RS08380 1736382 .. 1736395 -  -3.8  -3.39895   CTGCTGATGAACGAA               GGCA ATGTTA TGCC                GGCGCAGCAGCGCCA  51 312
 SCL_RS08365 1730344 .. 1730367 -  -3.9  -2.80816   GCGCCAGCCATCATA         CTGGCCGGTGG CGGT CCAC-G-CCAG          CATTAGACGGTGCCG  43 59
 SCL_RS08360 NONE
 SCL_RS08355 1728361 .. 1728404 -  -8.3  -2.52676   TATTTTTGGAACGCA GATGAACGCAGATCAGAAA AATTTA TGTTTTATCTGCGTTCATC ATTAAATATGAATCT  56 68
 SCL_RS08335 NONE
 SCL_RS08330 1718795 .. 1718821 -  -7.9  -4.27316   GGCGTTAACTTAAAA         CGCAGGACGCG TGATG CGCACCTTGCG         CTTGCCGGAGATCAT  77 48
 SCL_RS08320 NONE
        cysE NONE
        iscR NONE
 SCL_RS08305 NONE
 SCL_RS08300 NONE
 SCL_RS08295 NONE
        iscA NONE
 SCL_RS08285 1711874 .. 1711884 -  -2.4  -3.08327   ATTAAACCGCCAAGA                 CGCC AAG GTCG                 CCAAGGTCGCCAAGG  42 124
        hscA NONE
         fdx NONE
        iscX 1709247 .. 1709271 -  -2.8  -4.48987   GTCCGACAACGAAAA          CGGGCTGT TTTGGCGGG AAAGCCCG          GCCCGGACCTCAGGC  64 35
        rlmN NONE
 SCL_RS08260 NONE
 SCL_RS08255 NONE
 SCL_RS08250 1705052 .. 1705080 -    -3  -2.52464   GCCTTGCTCAATGGA        GCCCCCTCAACC GGTCT GCTTGATGGGGA        AAACTTTCTTGTCCG  40 3
 SCL_RS08245 1703704 .. 1703752 -    -9   -3.0644   ATTTAACCGCCAAGA CGCCAAGAACGCCAAGTTTTTA CTGTT TAAAAAATAGTCTTTCTTGGCG CCTTGGCGTCTTGGT  63 61
 SCL_RS08240 NONE
        bamB 1701798 .. 1701849 - -11.2  -3.59979   TTTTTTCACCGCAAA GACGCAAAGA-ACGCAAAGGTTTTT CTG AAAAATATTTGCCTTTCTTTGCGTC CTTTGCGTCTTTGCG  77 66
         der 1700283 .. 1700293 -  -4.6  -3.05715   AACGCGCTCACGTAA                 CAGC CTC GCCG                 TGCCCCAGGTTCAAA  47 119
 SCL_RS08225 1697967 .. 1697985 -  -4.5  -4.12188   GCATCACGGTCAAAA             GCGGC GCGCGCGTG GCCGC             GGGCGATAAAATCGG  63 165
 SCL_RS08205 NONE
 SCL_RS08200 NONE
 SCL_RS08195 1691637 .. 1691668 -  -2.8  -3.93658   AAGATTGTCAAACAA      CTGTTGGGCTTCGC TATC GCTCAGCCCAACCT       ACATTCAGTTATCAC  56 37
 SCL_RS08185 1689716 .. 1689728 -  -6.3   -2.9294   TACACGAGGGAGAGA                TGTAC TCG GTACA                CCCCCGGTTCTAAAT  51 41
 SCL_RS08180 1689369 .. 1689397 - -19.1  -3.55444   TGTTTACTGGTCAAA        TAAAAATGGGGCC TTT GGCCCCATTTTTA        TTTGACTGGCGGAGA 100 178
 SCL_RS08175 NONE
 SCL_RS08170 1684819 .. 1684833 -  -5.6  -3.53563   AGATGTCGTGCCAAA               CGCGGA TGC CCCGCA               AACCGCCGGGTCATG  55 57
         ffs 1684629 .. 1684655 -  -5.2  -2.71924   CAGGCCGTTCGAAAC        GGGTGGCGGTT CGAGCC AACCA-CACCC         CAGTACCCGAAATAC  47 9
 SCL_RS08160 1682975 .. 1682991 -  -3.7  -2.82668   TTTTAAACTCTAAAC              CTTCG GCCGGAT CGAAG              CCGGGTTGACCCGGG  43 3
 SCL_RS08155 NONE
 SCL_RS08150 1681882 .. 1681894 -  -4.8  -3.16683   ACCGGATGGCATCAA                GCTG TCATG CAGC                AATCATGCCTCGCGT  49 28
 SCL_RS08145 1680922 .. 1680935 -  -9.5  -3.36273   CGCCGCCAAGATCAA               CGCCC TGCT GGGCG                AATGACGGCGCGGTC  70 49
 SCL_RS08125 1678188 .. 1678198 -  -3.2  -3.28712   TGGGCGGCGGTACAA                 CGGT TCC ACCA                 CCCCCTCCCCCGCCA  45 229
 SCL_RS08120 1676505 .. 1676532 -  -9.2  -3.54741   GACGAGTTTCTGAAA        TACACCGAA-GGC TCC GCCATCCGGCGTA        TCGGCTACGAATGCT  68 203
 SCL_RS08110 NONE
 SCL_RS08105 1673354 .. 1673381 -  -3.3  -3.09505   ACACGGGAGGCAACA        GGCGC-GCCAGG GCTTT CATGTCAGCGCC        TTCAGCAAAACATCA  43 13
 SCL_RS08100 NONE
 SCL_RS08095 NONE
 SCL_RS08090 1669568 .. 1669617 -  -7.9  -3.07005   AATTAACCGCCAAGA CGCCAAGAACGCCAAGTTTTTAC TGTT GAAAAAAATGGTCTTTCTTGGCG TCTTGGCGGTTCAAG  57 54
 SCL_RS08085 NONE
 SCL_RS08080 NONE
 SCL_RS08075 1666681 .. 1666707 - -15.3  -3.36515   GGCGAGCCGGAAACA         GACGAAGACAC TTAAC GTGTCTTCGTC         CCGGCGAGCGCCCCG  95 231
        rpsB 1661966 .. 1661988 - -15.6   -4.4727   CCAAGATTCATAAAA           CCAAGGGGGC ATT GCCCCCTTGA           TGTCACACTGTTTAT 100 37
 SCL_RS08055 NONE
 SCL_RS08050 NONE
 SCL_RS08045 NONE
 SCL_RS08040 NONE
 SCL_RS08035 1657864 .. 1657880 -  -2.1  -2.78596   GATGCTGCGATCAGA              CCGTTCC ATG GGAGAGG              ATTTATCCGTGATGG  39 41
 SCL_RS08030 NONE
        rseP NONE
        bamA NONE
 SCL_RS08015 NONE
        lpxD NONE
        fabZ NONE
 SCL_RS08000 1650191 .. 1650204 -  -2.3  -3.69395   CGGATCAGCGAACAA               TTCCG CGTT CGGAC                TGCTTGATGAAATCG  50 1
 SCL_RS07995 NONE
 SCL_RS07990 NONE
 SCL_RS07985 NONE
 SCL_RS07980 NONE
 SCL_RS07975 NONE
 SCL_RS07970 1642228 .. 1642265 - -14.1  -4.12902   CAAGTATTCTGAAAA   TTAACACCCCTCACGGC GGTT GCCGGGAGGGGTGTTTT    GTTTTACAGCGCCAA 100 401
        rfbB NONE
        rfbA 1639080 .. 1639093 -  -5.9  -3.28714   ACATTCATCAGAACA               CCCGC TCTT GCAGG                ACCCCAAGCAGATAC  54 4
        rfbC NONE
        rfbD NONE
 SCL_RS07940 1635465 .. 1635475 -  -2.4  -4.74453   GAATATATTCAAAAA                 CGCC GTC GTCG                 TCCCGTCACTTCACC  68 360
 SCL_RS07935 NONE
 SCL_RS07930 NONE
 SCL_RS07925 1631147 .. 1631162 -    -9  -3.23979   CCAATAGCAAGCTAA              CTCGCT ACCA AGCGAG               TCATATATCGATAAC  65 152
 SCL_RS07920 1630514 .. 1630526 -  -6.2  -3.14132   CTCTGCGCTCATGAA                CGGC ATATA GCCG                CTGTCCAGGCACCTT  52 82
 SCL_RS07915 NONE
 SCL_RS07910 1628000 .. 1628026 -  -5.1  -4.11216   TTGGTATTGGGAAAA        CAG-CTGGCC-GG CTT CCTGGCCGGTCTG        GGTGCCTAGCAATAC  65 140
        asnB NONE
 SCL_RS07895 1622984 .. 1623000 -  -2.3  -3.48924   TTATCGTGCAGATAA              CTGAT TGGATGC ATCAG              AATGAGCTGCTTTAT  47 154
 SCL_RS07890 1622127 .. 1622139 -  -6.2  -4.58773   GGCATGAAAGCAAAA                CCGG AGTCG CCGG                CATGAGCTAGGACGG  75 32
 SCL_RS07885 NONE
 SCL_RS07880 NONE
 SCL_RS07875 NONE
 SCL_RS07870 NONE
 SCL_RS07865 1617442 .. 1617460 -  -3.1  -2.92924   CCTAAATCATGAAAT             CAGCC GGCGATATG GGCTG             TCACATACTCCGCCA  42 6
 SCL_RS07860 NONE
 SCL_RS07855 1614625 .. 1614637 -  -5.5    -3.794   TCCTAATTCATTAAA                GTGCG CAA CACAC                GTCACGCCCGTATTT  61 105
 SCL_RS07850 NONE
 SCL_RS07845 1610357 .. 1610394 - -13.5  -2.63555   GAGTGACACAATCCA   CGGCCTGGATTGCGGCAC GTG GCGCCGCAATCCAGAA-G   ATATTTTGTCATGGC  78 132
        prsK NONE
        prsR 1606304 .. 1606330 -  -5.2  -4.15044   TCGTGCCGTAAGAAA        TTC-CCGGAAC TTTGTC GTCCCGGCGAA         AGCCGGGGCCAGGGA  65 178
 SCL_RS07785 1592822 .. 1592838 -  -3.6  -2.84574   TAGTGGAAGCAATGA              GCGCTT TTTTC ATGCGC              GGATTCATCGCGATC  43 114
 SCL_RS07780 NONE
 SCL_RS07775 1591049 .. 1591071 - -12.7  -5.40072   TCGGGCTGAAAAAAA           GAGGGCAGG TTTCC CCTGCCCCC           TCGCTAAAAAAACTG 100 59
 SCL_RS07750 1582470 .. 1582484 -  -2.8  -2.93348   GCGATCAACACGAGA               CCATAA AAA CCATGG               AATTATCAGTGCCTT  42 160
 SCL_RS07745 1580961 .. 1581004 - -17.7   -2.7083   CATGGCAGAAACGGA TCAGCG-TGTTCAGCGGCGCG ACGA CACGC-GCTGAACATCGCTGA TTTCGCGGACATCTC  95 103
 SCL_RS07740 NONE
 SCL_RS07735 1576950 .. 1576964 -  -8.5  -3.57144   GCGGCGACGCTGAAA               CCGGG CCTGC CCCGG               CTCGAAGAACGCATG  65 84
 SCL_RS07725 1574781 .. 1574817 - -17.4  -3.30441   TACGATTTCGGACAA   GCGTATGGGTGCGGTCC TTGC GGACCGCACCCAC-CAC    CTTACCGATTATTAT 100 103
 SCL_RS07720 NONE
 SCL_RS07715 1573299 .. 1573327 - -22.5  -4.54727   CTCCTGAAAGCAAAA        CGGCGGGGCACAA ATC CTGTGCCCCGCCG        TTCCATACTCCCCAT 100 110
 SCL_RS07710 1571130 .. 1571143 -  -8.1  -3.36823   CTCTCTAAAATCCAA               GCTGC CGCC GCAGC                ATTAAAACGTCCCGC  64 1
 SCL_RS07705 1570128 .. 1570163 -  -5.2  -4.44245   ACATCATGTATAAAA    GGACCGTC-GGGCCGGC GAT GCCGGCATTGCCGGTCT    TACGGGAAATACTCC  70 25
 SCL_RS07700 1569164 .. 1569208 -  -2.8  -3.66999   ACTCAGTCATGTAAA GACGGAAGAATGGGCCCGCAT CAAT AT-CGGACCGACGCTGCCATC AGTTTTTCTTTTTGC  51 24
 SCL_RS07695 1568054 .. 1568073 -   -10  -2.90212   GGATCAGTGCAGAGA            GCCTGACG CTTG CATCAGGC             AAGGTGGACGGCGTC  61 362
 SCL_RS07630 NONE
 SCL_RS07625 1552014 .. 1552040 -  -5.1  -4.07568   TGCCGCGGGCGAAAA        GAC-GGGCGTCG TTCC CGACATCCTGTC         TCCCGCGACATGAGT  65 57
        tilS 1550647 .. 1550691 -  -2.8  -2.71263   AAGGCGCGCGAACCA TTTACGACCTG-GACCCCGGC TTTC GCCGGGGTGACAAATCAAGAA ATCAACTCCAATCGC  41 19
        pyrG NONE
 SCL_RS07610 1547967 .. 1547996 -  -2.8  -4.34947   AAGAGATGATTAAAA       CCAGCGCGGTCTA TTCTT CAG-CCGCGCTTA       CCTGCGGTTACAAAA  62 60
 SCL_RS07605 1546576 .. 1546601 -  -5.4  -3.53012   GCGCTTGCGCCGAAA         CCCAACATCG GCGCCG CTACGTTGGG          GTTCGCTACGCTCAC  55 62
 SCL_RS07600 1545792 .. 1545805 -  -2.3  -4.51765   GAGAATCGAAATAAA               TTCCG GGCA CGGCA                TCACCGTCAATTACA  65 391
        sdhC NONE
        sdhD 1541101 .. 1541143 -  -6.9  -2.76492   CCAGGCAGTCGAAAC GCCGGCGCGCGATATTGATC ATGC GAGCAGGATC-CGCGCCGCC CACAGGCCCAGCGCC  52 1
        sdhA 1539364 .. 1539380 -  -6.5  -4.20918   CCCAATGTTAATAAA              CCCGC TCCTTCG GCGGG              AACGTCTCCACACTC  70 1
        sdhB 1535755 .. 1535811 -  -5.2  -3.04461   CATCCAGCTCCAACA GTCCGC-GCCGG--GAGCGCCAGC-GGA TTCGC TCCAGCCGGCGCTCATCCATCAGAGGAC GCGCTTGGCCAGCAT  50 17
 SCL_RS07545 1535475 .. 1535507 -  -3.3  -2.57985   GCATAAGCCAAGCCA      TGGGCGTCACCGC CACCAGC ACCATGCCGCCCA      GATGCGTGGCCAGAA  40 85
 SCL_RS07540 1534965 .. 1534979 -  -2.8   -3.9122   GAGCTGCTGAAAGAA               GAAGTC CGG GAGTTC               TACAGTAACTTCAAG  56 189
        rpoE NONE
 SCL_RS07525 NONE
 SCL_RS07520 1531087 .. 1531125 -  -2.2  -3.02946   CTTGTAAGTATAAAC   CTGTGAGCTGGGGTTCGC TGC GCTCACCCCAACCTGCAA   CTGTTTTTTTAATCC  42 72
 SCL_RS07515 1529512 .. 1529526 - -12.8   -4.7373   CGAGGGTATGAAAAA               GGCGCC AAC GGCGCC               CGGGATTCTGGTCTG 100 131
 SCL_RS07510 NONE
        lepB 1526724 .. 1526734 -  -3.2  -2.76815   ATCTCCTTCAACAAT                 CCTG TGT CAGA                 TATCTGCGCTAATGG  41 34
 SCL_RS07500 NONE
 SCL_RS07495 NONE
 SCL_RS07490 NONE
        recO NONE
 SCL_RS07480 1523214 .. 1523228 -  -3.6  -2.65264   TCAGGATTTACAGGA               TTAAGA ATT TCTCAA               ATATAAAAAATCCTG  42 60
 SCL_RS07475 1522758 .. 1522784 -  -5.6   -4.1822   CGCGACCGGAAGAAA         TCCCGGCCGTCG GGC CGTCAGCCGGTT         TCGAGCGTCACGAAG  65 16
 SCL_RS07470 1521889 .. 1521907 - -10.2  -4.09805   TGATGAAGAAGGAAA             TCTCGCCG CCC CGGCGGGA             TCGGTCAAATATCTC  78 135
        hypC NONE
 SCL_RS07440 1516509 .. 1516527 -  -8.8  -3.13403   TGTGCGTGAGGAACA             GGATGCGC ATG GCTCATCC             GCCCGAAACGATGCT  63 20
 SCL_RS07435 1514703 .. 1514716 -  -5.9  -3.38812   GGTGGCCGAACAATA               CCGGC AGGA ACCGG                GCAAGGTGGCTTCCA  52 112
 SCL_RS07425 1512968 .. 1512990 -    -2  -3.78934   TTTCGTTGATAACAA          CGTCAACCG CCAAAT CGA-TGACG           GTGAAACGATAATAA  52 454
 SCL_RS07405 1509132 .. 1509144 -  -2.6  -3.07142   GAAAATAGCACAAAC                CGGC GCGCG GCCA                CAAGTTTGCAACCCG  42 49
 SCL_RS07400 1509008 .. 1509020 - -10.5  -3.82191   TCAACTCCACAACAA                CCGGC GGT GCCGG                ATCGAATTAATGGTA  80 36
 SCL_RS07395 NONE
 SCL_RS07390 1506273 .. 1506286 -  -5.9  -3.34013   TACTCCTTGAAGTAA               GCGCC TGCG GGCAC                ATGCATGGCCCGTTC  56 137
 SCL_RS07385 NONE
 SCL_RS07380 1505611 .. 1505634 - -13.2  -5.67063   TTTATCATAAAAAAA          GGGAAAGGCC GGTT GACCTTTCCC           TTTCTGTATTACCGC 100 73
 SCL_RS07375 1504264 .. 1504274 -  -2.6  -3.31144   CGCTGATTTTCATAA                 TTAA TTC TTAA                 TGGACAGGACTTACA  43 104
 SCL_RS07370 NONE
 SCL_RS07365 NONE
 SCL_RS07360 1501129 .. 1501141 -  -3.3  -2.78384   GCGGGCGCCATCATA                CCGGA GAA TCCGC                TTGAAACAAGAATAA  41 42
 SCL_RS07355 1500810 .. 1500830 - -13.3  -2.84919   AGCCACCCACAAGTA            TGCGTCGCC GAA GGCGACACA            AAACCATTTTGAGTC  79 186
 SCL_RS07350 NONE
         pcm NONE
 SCL_RS07340 NONE
 SCL_RS07335 1496701 .. 1496739 -  -8.1  -3.58536   AAATCCAGCTTGAAA  CGGGCG-GCGGGCA-GAAC CTC GTCCGCGCCTACGCGCCCG  GCAGCATCACCGTCA  65 442
 SCL_RS07325 NONE
 SCL_RS07320 1493864 .. 1493879 -  -3.4  -4.16301   AACGCAGAGAAAGAA              TTTTTA AACT TAAAAA               TCTCTGCACCCTCTG  58 62
 SCL_RS07315 1492648 .. 1492666 -  -3.7  -4.57353   GGGCATGACAGAAAA             CGCCGCC GGGCT AGCGGGG             CAAATTATCCAGGAT  69 17
 SCL_RS07310 NONE
 SCL_RS07305 NONE
 SCL_RS07300 NONE
 SCL_RS07295 NONE
 SCL_RS07290 NONE
 SCL_RS07285 1486328 .. 1486345 -  -2.7  -3.05596   GACTGCTGCACGGAA             CG-GTTCC TTC AGAACTCG             GTCCAGTCGCCTCCC  43 16
 SCL_RS07280 NONE
 SCL_RS07275 NONE
 SCL_RS07270 1483631 .. 1483644 -  -6.7  -3.69437   CAATTGCAAAACGAA               CCTGT AATT ACAGG                GATTTGTCGCGGTGC  62 19
 SCL_RS07265 1481492 .. 1481503 -  -2.2  -2.57298   AAATGAATGAAAATC                CTGA TGCT CCAG                 CACCGTCCATGGTGT  38 49
 SCL_RS07260 NONE
 SCL_RS07255 1479814 .. 1479853 -  -2.8  -3.55444   TGGTCATGGCCGAAA  TGCCACAATCCAGACAAG AACC CTCAACTGAATCGCCGCA   TCGCCACGGCCGCGT  49 9
 SCL_RS07250 1478594 .. 1478607 -  -3.8  -3.13522   ATCTGTTCAGGAATA               TCCG GCATCT CGGA                CGAGACACTGGGCAA  47 144
 SCL_RS07225 NONE
        recJ 1468485 .. 1468518 - -13.9  -3.07816   CCCGGATGGAGCGAA     GCGGAATCCGGGTAT CCTG ATCCCCGGATTCCGG      CGCCAAGGCGCCTTC  84 71
 SCL_RS07215 1467485 .. 1467511 - -10.8  -5.00616   GCTTCGGTTAAAAAA         TGAACGGCGCGT GAT ACGCGCCCTACA         TCGTATTATTCGGGA 100 31
 SCL_RS07210 NONE
 SCL_RS07205 NONE
 SCL_RS07200 1464594 .. 1464626 -  -9.2  -3.08867   GGAAGTCGCAATACA     CACCGTCATTCCGGC GCAA GCCGGAATC-CAGTG      TATTAATGCCTTTAT  63 92
 SCL_RS07195 NONE
 SCL_RS07190 1462339 .. 1462352 -  -5.9  -4.18197   ATGGGGCACGCAAAA               GCACG GCAA CGCGC                GCCAACTACCTTAAT  67 256
 SCL_RS07185 1461551 .. 1461583 - -16.3  -2.83371   CACGCGATGAACAAC      GTTGGGGTTCGGCGT TAC ACGCCTCACCCCAAC      CTACATAAACTGTTC  90 91
        uvrC 1459101 .. 1459153 - -11.8  -2.97423   GCCAACAATATTACA TGTAGGGCGCGTTTTACGCGCCGA TCGAG TTGGCGCGTGGTACGCGCCCAACG TCTGCTCGAACACAA  75 184
        pgsA 1458425 .. 1458443 - -10.2  -3.95219   CTTAAATGCTAGAAA             TGGCGCGT GGT ACGCGCCC             TACGTGAGTAGATTT  83 54
 SCL_RS07170 1458090 .. 1458117 -  -9.2   -5.4505   CTCTTGAACAAAAAA        GGGAGG-ACCC GGCAAAT GGGTACCTCCC        CGAGTGTCTGGAGCG 100 34
 SCL_RS07165 NONE
 SCL_RS07160 1457841 .. 1457853 -  -3.3  -4.30978   CCCAACCTACGAAAA                CCAGC CGT GTTGG                TGGTGCCCAGGGCCG  62 26
 SCL_RS07155 1454009 .. 1454030 - -10.1   -4.7373   CGACGTGACCAAAAA           GATGCCCAG GAAC CTGGGCTTC            TTGTGGGAGATCGGG  95 380
 SCL_RS07150 1452738 .. 1452772 - -14.2  -3.92324   TCCCCTAAGATCAAA     TGTTGGGGTTCGGCGC TGC GCGCCTCACCCCAACC     TACATGAACTAGTTC 100 137
 SCL_RS07145 1452395 .. 1452432 - -13.5  -3.33865   GATCTCAAATGAACA   TTCGGCGGGTTACGGCGA AAA TCGCC-TAACCCGCCCTA   CATTAAAATGTAGGG  88 85
 SCL_RS07140 NONE
 SCL_RS07135 1450912 .. 1450927 - -10.4  -3.00704   AGGTTTTAAATGACA              TCCCGC GACA GCGGGA               TACTTCATCGGTTCG  68 262
 SCL_RS07130 1449896 .. 1449908 -  -6.2  -2.90075   CTCGGGTTAACTAGA                GCCG GGTGA CGGC                AAACGTGTCGCAATC  51 8
 SCL_RS07125 NONE
 SCL_RS07120 NONE
 SCL_RS07115 NONE
 SCL_RS07110 1437705 .. 1437717 -  -4.9  -3.14344   CATTTTTTCCATTAA                TTCAT CCC ATGAA                GCTTCTAGCGACGCA  47 168
 SCL_RS07105 1436733 .. 1436744 -  -4.4  -4.82901   GGTTTGTTAGAAAAA                CACT AGCG AGTG                 TAACTGCAGCAGTTA  74 185
 SCL_RS07100 1434521 .. 1434573 - -14.2  -2.77182   GGCGAGAGGGAATTA CCGTCTACCCACTCCCCTCTCCCCCT TTC AGGGGGAGAGGGTTA-GGG-AGAGGG GGCGCTGTCCTTCGA  83 56
 SCL_RS07095 NONE
 SCL_RS07090 1433485 .. 1433497 -  -3.3   -2.8372   TAGTTTCCATTAAAC                CGGCA TCG TGCAG                ACCGCGGGCGGTCTC  41 79
 SCL_RS07085 1432937 .. 1432961 - -18.7  -5.68023   GGATAAGCAAAAAAA          CAAAGCCCGCT TGT AGCGGGCTTTG          TTTCAAAAAACTGCG 100 298
 SCL_RS07075 1431926 .. 1431939 -  -2.3  -3.05522   GAAGGGCCCGAAAAC               CTGCT TTAA AGCTG                TCCAGGCTGGTTTCG  42 17
 SCL_RS07070 NONE
 SCL_RS07065 1430176 .. 1430203 -  -4.8  -3.06183   CTGAGCGTCAGCGAA        GCGCACCAAT ATACGTCG AACGGTGCGC         AACGCTGCGCTTTTG  47 85
 SCL_RS07050 1427987 .. 1428015 -  -8.8  -3.34715   CAGTCTTTTCAAACA       GCAACCCCGCCGC TTAA GCG-CGGTGTCGC        GTTATCTCTTTCCTG  66 27
 SCL_RS07040 1426660 .. 1426676 - -10.1  -2.63102   AGGATTTGCATATCA              TCCCCGC GCA GCAGGGA              TTCATTGATTACCGT  63 42
 SCL_RS07035 1425947 .. 1425973 - -12.2  -2.52623   CTCCCGGCACAACAT         CAGACCCGGGGT TCA ACCGCGGGCCCG         GTCACGCCCGTCGCT  71 100
 SCL_RS07030 1423338 .. 1423356 -  -7.4   -4.3255   TGGTGAAGCAAGAAA             CCGTGATT GAT AATCCCGG             CAAGAACCCGGCGCG  76 220
 SCL_RS07020 1422093 .. 1422110 -  -3.4  -2.71144   TACTTTTGTTAATTA             GT-CCGC CCAGC GCGGCAC             GTATTTCCACCCGTT  41 5
 SCL_RS07015 1420684 .. 1420703 -  -9.2  -2.56124   TTCAGGTAAAGATAT            GCGCGACC GTCT GGTCGAGC             TGGGCGACCAGCGCT  56 397
 SCL_RS06995 NONE
 SCL_RS06990 1416945 .. 1416964 -  -3.4  -3.97368   CTGCCAATCCAGAAA            CTGCTGAG CCGC CTCCGCTG             GGACCCGCGCTACCG  58 259
 SCL_RS06970 NONE
 SCL_RS06965 1414482 .. 1414497 -  -3.2  -3.25823   GCTTTTTCAGATCAA              CACGGA CGGG TTCGTG               GAATTTCCGGCGCGG  45 48
 SCL_RS06960 1412349 .. 1412382 -  -3.1  -3.16668   CAACACTCTGACGAA     GTACG-CCTGATCG AGACAGA CGATCCGGGCGTGC     TGGTGGATATTGATC  44 205
 SCL_RS06935 1407749 .. 1407765 -  -3.6  -4.24606   AACCGAGATGGAAAA              CCGCGA AGGGA TCGGGG              CAGACCGGTGTGCGC  64 86
 SCL_RS06930 1406071 .. 1406091 -  -3.1  -2.75268   TAATCATGTGGAAAT            CACCAGGAG CGG CGCACGGTG            CCCTTGCCTGCCGAT  41 4
 SCL_RS06925 1404350 .. 1404363 -  -2.3  -3.43288   GAAATCCTAGCATAA               TGCGG GAAT CTGCA                AGTAAAGCCTGGATG  45 96
 SCL_RS06920 1402614 .. 1402626 -  -6.2  -3.21099   GTTTTTCACGACGAA                CGGC GTCAT GCCG                GGCCCGGCAGTCGGC  54 424
 SCL_RS06910 NONE
 SCL_RS06905 NONE
 SCL_RS06900 1400782 .. 1400808 -  -8.7  -4.72986   GACGTGGAGCAAAAA         CATCAGGCGCG CCGGC CAGGCCTGATG         GTTACCCGTGTGACA  93 93
 SCL_RS06895 NONE
 SCL_RS06890 1399609 .. 1399641 -  -7.7  -3.73224   TCATCCCTGATGAAA     CAGCCCCGGCT-CC GTCAAT GGCAGCCGGGATTG      TGCTCGCAGACTTTT  65 80
 SCL_RS06885 1398412 .. 1398464 -  -6.3  -3.53012   TGCCTGTTGCTGAAA CAGTTTCACCCTCCACCAAGGTCGC GCCGG GCG-CTTTGGTCGAGGGTGTG-CTG GACGGGATCGCTAGA  57 36
 SCL_RS06880 1397629 .. 1397649 -  -7.5  -3.31845   AGCATAATAACGTAA            TGCACCGGA CGA TCCGGCGAA            TGCTCAATCTTTTGC  61 29
 SCL_RS06875 1396534 .. 1396551 -  -2.6  -2.91593   GACTCCCCGATAAAC             CGGCTG CCTATT CACCCG              CCTCCATGGCCCGGG  40 15
 SCL_RS06870 NONE
 SCL_RS06865 1395137 .. 1395149 - -10.5  -3.13788   ACTGAATGCAATATA                CGGCG TCA CGCCG                GGACAGGCCAGGGCG  64 110
 SCL_RS06855 1394284 .. 1394295 -    -3  -2.99325   TCGGTACAAGCAAAT                TCAT TTTC ATGA                 CGACATCTCCTGCGA  42 59
 SCL_RS06850 1393753 .. 1393763 -  -3.2  -2.57132   CGGTTCTTCCATAAG                 CAAC AGT GCTG                 TCCCGGATGATGTCG  40 61
 SCL_RS06845 1393286 .. 1393307 -  -6.5   -3.0263   ATTACCTTTTGAATA           CCGCGGTGAT TTC AGC-CCGCGG           CGCTGACTATCCTGC  54 51
 SCL_RS06835 1391762 .. 1391777 -  -3.3  -4.15328   AATTTAAATCATAAA              TTGAC TTGTAT GTCAA               TATTTATATTAAAAT  58 152
 SCL_RS06830 1389835 .. 1389857 -  -9.2  -4.67755   AGAGGGAGTCAAAAA           GTTTGTCGCA CCT TTCGACAAAC           TGCTCGCTTCACTCG  93 272
 SCL_RS06805 1383924 .. 1383945 -  -5.1  -3.34398   GGCGTTCGTGAAACA           CGTGGCGGAG TGC CTG-GCCACG           TTGCGCGCCACGAGT  50 140
        accC NONE
        oadA 1367795 .. 1367851 -  -9.5  -3.06737   GATTAACCGCCAAGA CGCCAAGGACGCCAAGAAGAACAAGA TTAAAT TCACAT-CATCTTGGCGCTCTTGGCG TCTTGGCGGTTCAAA  67 45
 SCL_RS06715 1366716 .. 1366734 - -10.2  -4.28111   GACACCATGAAGAAA             GTCGGCGT GGA ACGCCGGC             TCATGACGGCGGGTG  85 490
 SCL_RS06690 1361178 .. 1361207 - -19.5  -3.58522   AGTACGAGCCTCAAA       CAAAAAACCCGCC TTGC GGCGGGTTTTTTG        TTTACTTGTTGCCTT 100 27
 SCL_RS06645 1352719 .. 1352735 -  -4.5  -4.55689   AGTACGCAGAGAAAA              GATTTCT GAT AAAAATC              TCTGCGACCTCTGCG  71 64
 SCL_RS06620 1347798 .. 1347810 -  -4.8  -4.27443   CGATCAGCAAAACAA                CGGA ATCCA TCCG                ATGGCCGTGGCTGTC  68 205
 SCL_RS06605 1343493 .. 1343505 -  -9.1  -2.87501   CGGCAGGAAACATTA                GCGCA ACA TGCGC                TGATTCAGCAAATGG  62 66
 SCL_RS06600 1342755 .. 1342770 -  -3.9  -2.92613   TCTGACCGGAAATGA              CGCCG GCAGTT CAGCG               GTTATTCCGATCAAC  44 89
 SCL_RS06595 NONE
 SCL_RS06590 1341215 .. 1341225 -    -4  -3.64283   TAAATGGGTTAAGAA                 TGAA TTA TTCA                 AGCCCTTCCAGACTT  53 72
 SCL_RS06585 NONE
 SCL_RS06580 1340312 .. 1340326 -  -4.2  -3.05384   TTGTCGGTCATGGAA               TTCGGA TGG TCCGAT               TTTTATCCGGATTTA  47 38
 SCL_RS06575 NONE
 SCL_RS06570 NONE
 SCL_RS06565 NONE
 SCL_RS06560 1338877 .. 1338903 -   -21  -3.09175   AAGCGTCATCCAACA         CAAAAGCCGCCC GGT GGGCGGCTTTTG         TTTATTTGCACTTGG 100 56
 SCL_RS06545 NONE
 SCL_RS06540 1336860 .. 1336870 -  -2.4    -3.922   AAATCCGGAATTAAA                 GGGC TAG GCTC                 AGATTTCAGCGGCGC  54 31
 SCL_RS06535 1335847 .. 1335861 -  -6.4  -3.62518   GCAAAGATTGCTAAA               GACTAG ATA CCAGTC               GTCTTTGTATTTCAT  60 6
 SCL_RS06530 1334717 .. 1334743 - -12.2   -3.5594   AATCCAGTCTTTAAA         TGGTTCGCGCGC TTT GCGCGCGACTCA         AAAGCATAATTGCGG  81 463
 SCL_RS06520 1330027 .. 1330040 -  -2.3  -3.10091   ATCGCGAAAATTATA               CGGTA AGCC TGCCG                CGTCGGCCAATCGAA  42 126
        dapC 1328691 .. 1328718 -    -9  -3.06183   CTGAGCGTTAGCGAA        GCGCACCGAATG AGGC CGCACGGTGCGC         AACGCTTCGCTTTTG  63 112
        dapD 1327798 .. 1327819 -  -2.9  -3.67989   AAAAGTTTATCGAAA           TCGCGAC GCTCAGAT GTCGCGC            AATAACTCATTAATG  51 13
 SCL_RS06505 1326374 .. 1326385 -  -5.8  -2.60496   GCCCGGGGGAAACAG                GGCA GGCT TGCC                 GCATCCGGGCGGGCG  49 256
 SCL_RS06500 NONE
 SCL_RS06495 1324591 .. 1324601 -  -2.4  -4.62302   CAATATGCCGAAAAA                 GGGC GAT GCCG                 GCATTGAATTGCTGC  68 178
 SCL_RS06440 1314301 .. 1314327 -  -7.9  -4.09864   ACGCATCCGGCAAAA         CGGTGACGTGG CGCGC CCACGGCAACG         GTTGCGCCCACTACA  70 290
 SCL_RS06375 1302113 .. 1302157 - -14.4  -2.63501   CCAAGAAGTAACGTA TCC-GTCGCG-ACAGGCTGTGC CGT GCACAGCCTGTTCGCTTCAGGA ATTCTGCTGCGCCTT  81 20
 SCL_RS06360 1299660 .. 1299680 -  -3.9  -3.53091   AGGTGGTGGGGCAAA            TCATGTCAG CGC CGGTCATGA            CCGCGCGCGAGGACA  51 261
 SCL_RS06350 1297970 .. 1297982 -  -9.1  -2.63301   GACATTTTTATAGTA                TCGCC TGC GGCGA                TGGATAACTTGTTAC  59 60
 SCL_RS06345 NONE
 SCL_RS06340 NONE
        msrB 1295959 .. 1295969 -  -2.4  -3.06796   CTCCAGGCGACGCAA                 TGCG TTG CGCT                 TATTGCGCCCCACGG  42 63
 SCL_RS06330 NONE
 SCL_RS06325 1294493 .. 1294518 -  -5.3  -3.15861   CATGACCTGGATCAA         GT-GCGGCCGCG TCC CGCGGTGGCCAC         AGTTTCAGCGGTCAA  50 30
 SCL_RS06320 1293479 .. 1293498 -  -7.1  -3.39784   GCATGCTGAAGAACA            GTCCGGCG ATCGG CGCCGG-C            ATCCGCCCCAACTGC  57 332
        dsrA 1286592 .. 1286603 -  -3.6  -3.53563   ATATCTTGCCGGAAA                CGGA TCAG CCCG                 CCGCCTGCTGCTTGC  51 18
        dsrB 1285425 .. 1285436 -  -3.6  -4.57569   CGACGCCGGGAAAAA                CCCG GCGT CGGA                 TACGGCTATACGTGC  69 48
        tusD NONE
        tusC NONE
        dsrH 1284266 .. 1284282 -  -2.9  -2.91689   AAATTGATATTAAAG              CCAGGAT TGC ACGCTGG              GGTATTCTACCGCCA  42 3
 SCL_RS06255 1283894 .. 1283911 -  -5.5    -3.794   CGGTAATTGATTAAA             CGCAACC GGTC GGTTTCG              GCAGGCCGGCGTATT  61 3
 SCL_RS06250 NONE
 SCL_RS06245 NONE
 SCL_RS06240 NONE
 SCL_RS06235 NONE
 SCL_RS06230 NONE
 SCL_RS06225 1277095 .. 1277113 -  -4.4  -5.02231   CAAAAATATTAAAAA             TCAGGCCG TGG CGGCTTGC             GGCTTGGCAGCATCG  80 7
 SCL_RS06220 NONE
 SCL_RS06215 1274875 .. 1274894 -   -10  -2.99319   AAGCGTTCATATATA            CGCCGCATC CGT GA-GCGGCG            GAAATCCGTGGAACA  65 195
 SCL_RS06210 NONE
 SCL_RS06205 1272220 .. 1272237 -  -5.5  -3.30124   CGGCATCGTGGAGAA             GGCGC AGGTGAAG GCGCC              AACACTGATCATCGT  52 220
        trxB 1258220 .. 1258255 -   -14  -2.54193   CATTACTTTAATGTA    GGGCGGGTTA-GCGGGC ATC GCGCGCGTAACCCGCCG    GATGTTCGGCGCGTT  81 76
 SCL_RS06135 1257155 .. 1257173 -  -6.7  -2.71765   ATATTGGAAAGCAAT             TCCTGGA GTACA CCCAGGA             CGGAAAATATAAAAG  52 393
 SCL_RS06100 1250002 .. 1250013 -  -5.8  -3.62572   GATCAGCACGGGAAA                CCGA TCGA TCGG                 ACGGTTTCCGGTTTC  57 254
 SCL_RS06090 1248910 .. 1248921 -  -2.2  -4.94992   GGAAATCGAGAAAAA                CCTGG AGT CC-GG                CATGGCGTCGGTGCG  74 74
 SCL_RS05785 1184412 .. 1184441 -  -8.5  -4.11503   TGAAACAACAAAAGA       TGTCGTGGGGTGA TACA CCACCCCACGATT        AGATTTTCAGCCAGC  77 77
 SCL_RS05770 1181393 .. 1181425 -  -8.4  -3.23045   ATCCAGATATTAAGA     TGCTG-GATGCCGGC TTCC GCCGGCATGACGGCA      AATTCCTTAACTGGC  62 32
 SCL_RS05765 1180591 .. 1180614 -  -2.3   -3.5721   GAGATCAAATAAAAC          CGTGCGG ATCTTAGTCA CCGCGCG           TGGTGTAGGCGATGT  47 12
         gph NONE
 SCL_RS05755 1178700 .. 1178738 -  -9.6  -2.63623   CTGCTGAAAATATAG CATGCCGGG--GCCCGGCC ATCG GGCCGGTCAGCCCGGC-TG  AACGTCGCGGACTGC  63 14
 SCL_RS05750 1177665 .. 1177684 -    -5  -4.15703   TTGCAGAAATAACAA            CCGTGACGC AGG ACGTCA-GG            CGAAGGTGGTCTTGC  65 21
 SCL_RS05740 1176544 .. 1176578 - -12.8  -2.75957   CATGAAGGCGAACGA     TGTTGGGGTTCGGCGT TTC ACGCCTCACCCCAACC     TACATGAAATCTTTG  76 25
 SCL_RS05735 NONE
        nirD 1173436 .. 1173454 - -10.3  -3.30651   CGCGACACTATAAGA             GTACCGC GTCGT GCGGTAC             ACCCCTGAAACTGTA  71 84
        moaA 1171945 .. 1171965 -  -3.1  -3.70919   CGGAAACGGCAAGAA            TTCGCGCGC CAA GCACTCGCA            GGAATTGCTCCAGAA  54 442
 SCL_RS05710 1169214 .. 1169230 -  -4.3  -2.83403   TCTGCTGCATGAAAG              GCCCGGT GGA AGCGGAC              TGATCGCAAGCGGCG  45 110
 SCL_RS05705 1166169 .. 1166180 -  -2.2  -3.85817   ATGCCGGTGGAGAAA                CTGCC GCC GGC-G                TCCTGGCAGACCAGC  54 408
 SCL_RS05690 NONE
 SCL_RS05685 NONE
 SCL_RS05680 1159675 .. 1159686 -  -7.2  -3.55447   CGATGCACCAGACAA                CCCG TCGG CGGG                 GGAACGGCGTTGATT  62 70
 SCL_RS05675 NONE
 SCL_RS05670 NONE
 SCL_RS05665 NONE
 SCL_RS05660 1154205 .. 1154253 -    -3  -2.93435   TGAATCAGGTATACA GCGCCG-CCTATGCGAGAA-ACCC GCA GGGCATTGTCGAGCTGGTCGGCGC TGAAAGCGTGGCGGT  42 303
 SCL_RS05610 1146633 .. 1146655 -  -4.1  -3.80841   AGCATGATGATGAAA          CGTACGCCCA TCCA TGGGTG-ACG           CAATAATATGTGCAT  56 73
 SCL_RS05605 1145703 .. 1145714 -  -3.6  -3.04144   CCCTGACGCTCAACA                CCCC GCTC GGAG                 GGCACTTGGTCAGTG  43 403
 SCL_RS05580 1140803 .. 1140835 - -16.3  -2.64827   ACAAAAATTATCAAC      GTTGGGGTTCGGCGT TTC ACGCCTCACCCCAAC      CTACATCTTAAAGGT  89 33
 SCL_RS05510 1126103 .. 1126123 - -11.1   -3.1247   ATGCGTTATATCGAA            CTCAACCCG TTG CGGGCCGAG            ATGGTGAACCACGCC  72 299
 SCL_RS05490 1120745 .. 1120769 - -12.1  -2.78384   TGCGGGTGGAGGATA          TCCGCGAGCAC CGC ATGCACGCGGA          ATATGTGCGCGTGCT  66 365
 SCL_RS05480 1117074 .. 1117089 -  -3.2  -4.32034   CGACGACCAGGAAAA              CGAGGA GCTA TCCTGG               TTCAGGCGTGAAGTA  62 294
 SCL_RS05455 1109476 .. 1109501 -  -4.6  -3.53012   TGGCGTGCGGTGAAA         CGGCGTCACC GGCGAT GGCCACACCG          GATGATCCTGAAACC  52 99
 SCL_RS05430 NONE
 SCL_RS05425 1104415 .. 1104425 -  -2.4  -4.08767   GCTATCTGTTGAAAA                 CCGC CGG GCGC                 ACTTCCTGGGAGCTG  57 481
 SCL_RS05415 1103665 .. 1103684 - -11.4  -4.67641   ACCTGAAAATCAAAA            GGGCCACG TCGT CGTAGCCC             CTTGATTGGATTGGT  95 37
 SCL_RS05375 1095643 .. 1095667 -  -7.9  -2.77899   CCGTTGGACCAAGGA          CGCAACCAAGT GAG ACCTGATTACG          CACATTTGAGAACGC  55 148
 SCL_RS05335 1084633 .. 1084647 -  -2.8  -3.98981   AACAGCGAAGAAGAA               GTTTGT CGA ACAGAC               TGAATATCACACCTG  56 113
 SCL_RS05330 1078050 .. 1078066 -  -2.2  -3.76402   ATTTGACGCATTAAA              CGCAAA AACGA TTGGCG              TCAGTCATTTTGGCT  50 186
 SCL_RS05310 1074540 .. 1074552 -  -5.5  -3.20841   AGAGCGAGATCAACA                TCGCC ATC GGCAA                GAAGGCGCCGGAGAA  52 176
 SCL_RS05250 1057504 .. 1057544 - -23.6  -3.66654   CATTCGAAGCTCAAA  TCACAAAGGGGCCATGAA TACAG CTCATGGCCCCTTTGTGA  TTTGGCGCTCCCAAG 100 28
 SCL_RS05230 1054054 .. 1054086 -  -4.9  -3.36273   GTTGCGCAACATCAA     GTCTCGGGTG-GCGT GGCTG ACGCACACCGG-GAC     GAATGAAGCCGGGTG  50 169
 SCL_RS05220 1050643 .. 1050658 -  -2.4  -3.01924   CACGCCGGCGCAATA              CGCCGC GCTG GCCGCA               TTCGATGCCGGAGTA  41 503
        dksA 1048358 .. 1048368 -  -8.2  -2.70143   ATGTGAATGATAGCA                 GGCG CCG CGCC                 GACGATAGCGGGCTT  56 120
 SCL_RS05200 NONE
 SCL_RS05195 1046891 .. 1046931 -  -6.8   -3.5393   ATGATGGGGCGCAAA TGCGGGCCCCGTCCGGGCAG CGG CTGCCCGGA-GCGGTTCG-A TATCACCACATCGCG  60 28
 SCL_RS05190 NONE
 SCL_RS05185 1044853 .. 1044864 -  -4.4  -2.70932   GGCGGGCTGGAAGCA                TCCA TCCA TGGA                 TCAGAAGTTTATGGA  45 221
 SCL_RS05180 1043892 .. 1043933 -  -2.9  -3.36327   TTACTTCACGGATAA CGGCTGACATTATCCGTTA TAGA TATCGGTCAAGATAAGCCG  GGATGCGTTCTTCCA  47 0
 SCL_RS05105 1032616 .. 1032658 -  -9.9  -3.09004   GCAGCGGCAAAAGGA GCGCTATT-TTGGCACCCCG CCGG CGGGGCGGCAAGAACATCGC GGAATATTTCCGGGT  67 60
 SCL_RS05100 NONE
 SCL_RS05095 NONE
 SCL_RS05090 NONE
 SCL_RS05085 1030492 .. 1030516 - -21.5  -3.84246   GGCGCAAGGATGAAA          CCCATCCCGCC GAC GGCGGGATGGG          GATGAGCAGGTGGCT 100 40
 SCL_RS05080 1029365 .. 1029402 - -19.9  -2.71693   TACTAATTAAAGTCA   TATCCCCTCTCCCCCAC GGTC GTGGGGGAGAGGGGAGT    TTTTTCAGTCAGCTT 100 85
 SCL_RS05045 1018095 .. 1018109 -  -7.1  -2.79501   GACAGTTTCATGACA               GCTGG AAGCG CCAGC               TCCAATAGATCCGAT  52 446
 SCL_RS05040 NONE
 SCL_RS05035 1015280 .. 1015301 -  -3.7   -4.3739   CAGCTCTCCATAAAA           TGAGCCTGCA TTT CG-AGGCCCA           AGGAACAAAACTTAA  66 188
 SCL_RS04990 NONE
 SCL_RS04985 1004854 .. 1004866 -  -9.1  -3.14931   TGTAGCCCGGATGAA                GGCAC GTA GTGCC                GTAATCCGGGGAAAG  63 124
 SCL_RS04980 NONE
 SCL_RS04975 1002950 .. 1002966 -  -7.9  -2.50345   AGGGGAGAAAAGTAC              CCACGGG GAG CCCGTGC              TCCCGTACGGTTTCC  53 161
 SCL_RS04970 1000546 .. 1000571 -  -6.7  -3.31269   CGGACAGCAGATGAA         CGCC-CGTCAGG ACG CCAGTCGCGGCG         CGCCGTAAAACAGGC  58 6
 SCL_RS04965 1000092 .. 1000109 - -14.1  -5.61881   CGCCAAAAAGAAAAA             GCCGGCC CGCA GGCCGGC              TTGAAAAAACAGACA 100 60
 SCL_RS04960 NONE
 SCL_RS04955 NONE
 SCL_RS04950  996446 ..  996462 - -10.8  -3.53012   GCGCTGCGCTCGAAA              CGGCGC GGGCA GCGCCG              GACGTTACGAAACTT  74 43
 SCL_RS04915 NONE
 SCL_RS04910  989543 ..  989578 -  -5.5   -3.1355   GTGAGTGACACGTAA    TCAGCGGGCCGAACAA CTATT TTGCTCCACC-GCTGA    CTTCGCCTGAGCGCC  50 109
 SCL_RS04785  966227 ..  966260 -  -7.3  -3.53012   GGCGCCGCCGTGAAA     GCGGCGTCTGGGGTAC GGT GT-CTCCCCACGCCGC     GGTAACCGCTGCGCG  62 57
 SCL_RS04770  964879 ..  964922 - -13.6  -2.60492   CAAAGAAGCAGTAAG CCGGAGCCGCCCCAGCGGCG TCAT CGCCGCCGGGGATTACCCGG AGCGGGATCGGTTCG  78 18
 SCL_RS04715  956681 ..  956696 -  -2.5  -2.91264   TTTTGCACTCATAGA              CACCT CCTTTC AGGCG               ATTGGTTTGGTTAAG  40 19
 SCL_RS04710 NONE
 SCL_RS04705  955909 ..  955919 -  -8.2  -4.88407   TCAGCCAACCAAAAA                 CCGC GGT GCGG                 GCGGGAAGTAGCTGC  95 83
 SCL_RS04700  953018 ..  953034 -  -3.5  -4.37658   AATGCCGCCACAAAA              GGCGCCG TAT CGGAGGC              AGCCGGTAGGATGGT  64 96
 SCL_RS04670  946926 ..  946936 -  -6.8  -2.53688   AAAATAATAGAAATT                 TCCG AGC CGGA                 GGAGCTGTCACCGCC  51 504
 SCL_RS04650 NONE
 SCL_RS04645  942324 ..  942337 -  -5.2  -4.11216   GGTCGAGGCGCAAAA               CCGC ATCGAG GCGG                TGCTGACTTCCGAGC  65 154
 SCL_RS04585  931629 ..  931643 -  -7.2   -3.2614   CAGTTGGTAGAGCAA               CTGATT CGT AATCAG               TAGGTCAGGTGTTCG  58 126
 SCL_RS04570  930114 ..  930126 -  -5.5  -2.77899   GGCTCTCAGCAAGTA                CCGCT GGA AACGG                ATGTTTGGCCGACGA  47 3
        pilV NONE
 SCL_RS04560 NONE
 SCL_RS04555 NONE
 SCL_RS04550  924056 ..  924084 - -14.6  -5.41143   CAGCTTCTAAAAAAA        GCCGTCTCCTCC GGACA GGAGGAGACGGT        GGATGTATCAGATCC 100 50
 SCL_RS04545  923301 ..  923311 -  -6.8   -3.0263   ATCAGCGCCGGAAGA                 GCTG GTG CAGC                 AGGTAGTTATGCAGT  51 188
 SCL_RS04505  915101 ..  915117 - -15.1  -5.83822   GACACCCAAAAAAAA              GGCCGGC AAC GCCGGCC              TTTTTTATTATGAAG 100 50
 SCL_RS04480 NONE
 SCL_RS04475  910808 ..  910820 -  -4.7  -4.44667   TCTTTGAAGAAGAAA                CCAGG CCA CCGGG                TTGTCGGCGCGCCAA  71 91
 SCL_RS04465 NONE
 SCL_RS04460 NONE
 SCL_RS04455 NONE
 SCL_RS04450  906509 ..  906532 - -18.2  -5.55695   CAATAACATAAAAAA          CAAGGGCGGC TTGC GCCGCCCTTG           TTTGTTTGCCGAACC 100 46
 SCL_RS04445 NONE
 SCL_RS04440  902397 ..  902409 -  -4.7  -3.26834   AAATCATAGCATCAA                CCGGG CAA CGCGG                CGTCTGGGCGAATAA  49 125
 SCL_RS04435 NONE
 SCL_RS04420  897765 ..  897790 -    -9  -2.73441   GACCACGCTGTAAAT         CCCTGCCTGCC GTTGA GGC-GGCAGGA         TTGTATGCCACTCCA  60 73
 SCL_RS04415  897578 ..  897596 - -11.7  -4.61873   GGCCATAAATGAAAA             TGGCCGG TAATT CCGGCCA             TTTCGGGATTGGTGG 100 35
 SCL_RS04410  897422 ..  897432 -    -4  -3.09749   CAGGTTGAAGATACA                 TCAA TCT TTGA                 ACTTGGTGCCCCAGG  45 29
 SCL_RS04405 NONE
        ccmB NONE
 SCL_RS04395 NONE
        ccmD NONE
 SCL_RS04385 NONE
 SCL_RS04380  894109 ..  894131 - -11.2  -4.81551   GATTGAGATCAAAAA           CAGCGCTGTC ATC GTCAGCGCCG           GCGGCGTGCTGCCAA 100 122
 SCL_RS04370  891685 ..  891704 -  -2.8  -2.77233   GCAGAAGCTGGAAAG            TCCCATGA TCAG CCATGCGA             ATAATGTCCGCGCCA  41 62
 SCL_RS04365 NONE
 SCL_RS04360 NONE
 SCL_RS04355 NONE
 SCL_RS04350  884629 ..  884641 - -10.5  -2.74523   TTACCGCCAATATCA                GCGCG GTT CGCGC                TAGAAGTCCCAGCGA  66 25
 SCL_RS04325  879593 ..  879608 -  -3.2   -3.3095   ATAGATCGCGGACAA              GACGGC AACG ACCATC               AAGCGCAGAATCTTA  45 248
 SCL_RS04320  877697 ..  877708 -  -5.8  -3.49653   ATTATTCGCAGATAA                GTCG GGGT CGAC                 TCACTCCAACGCCAT  57 44
 SCL_RS04300 NONE
 SCL_RS04295 NONE
 SCL_RS04290 NONE
 SCL_RS04285 NONE
 SCL_RS04280  867426 ..  867461 - -11.1  -3.14463   AATGTCGGGGACTAA    CTGACGCGCCGCCGG CTCAGC CCGGCAACGCCTCAA     CCTTGACGCGCTGGT  72 6
 SCL_RS04275  866552 ..  866580 -  -3.7  -4.62069   GGCGGACGTGAAAAA        CATCCACGCCCTC GTT GACCGCGCGAACG        GCAAGTACCGCGACC  72 119
 SCL_RS04245 NONE
 SCL_RS04240  861314 ..  861331 -  -9.1   -2.9006   AATGCATGGTATACA             GGGTCCC GCCC GGAACCC              CGTTGCTGGAACGGG  58 315
 SCL_RS04230  858864 ..  858877 -  -3.7  -3.31144   CCGCCAGTCGTATAA               CGCTG ATGT CGGCG                TTCGTCCGGCGGCGT  47 64
 SCL_RS04225  858456 ..  858471 -  -4.6  -5.07053   AAGTAGGGGAAAAAA              GCCGCT GGGG ACCGGC               ATGCCCGGCCCGGAG  80 67
 SCL_RS04215  856968 ..  856978 -    -4  -3.75024   CCGGAGCAGGAATAA                 CAAA AAA TTTG                 TGGTTATGGCGTGTT  53 29
 SCL_RS04210  856260 ..  856311 -  -7.2  -3.31144   TTTCCATCGGCATAA CCGCGCGTGCGCCGCGGACATAAAC CCG GCTTATATCTGCAGCGC-CTCGATG GTCCAGCCGGTGCCG  59 4
 SCL_RS04205  855813 ..  855826 -  -2.4  -3.28924   CACCGCCGCTTACAA               GCTT TATACC AAGC                TCGGTTTCGACGAGG  45 132
 SCL_RS04150 NONE
 SCL_RS04145  843220 ..  843242 - -10.6  -3.85698   GTCGGCGGGCATAAA           GTCAGCCACT ACG AGTTGCTGAC           CAACGGCCAGCGCTG  76 381
 SCL_RS04095  831591 ..  831601 -  -8.2  -3.55444   CCGGCATGGCGTAAA                 GCCG GGA CGGC                 GGCTAACTGTTTGCA  65 28
 SCL_RS04090 NONE
 SCL_RS04085 NONE
 SCL_RS04080  827855 ..  827885 -   -12  -3.57144   CGCCCTAGTTCTAAA       GGTTTGAGATCACA ATT TGTGACCTCAAATC       GCCGGATTTCCTGGA  81 136
 SCL_RS04075 NONE
 SCL_RS04070  825091 ..  825120 -    -7  -3.30441   TATCATGTTGCAGAA       CCGCGGCGCCGGC TTCGT GCTGGAGCC-CGG       TCATTTCAACTGCAT  55 522
 SCL_RS04060  822887 ..  822898 -  -3.6  -5.55664   TTAGCATCAAAAAAA                GCAG TTAA CCGC                 CAAGACGCCAAGAAC  91 122
 SCL_RS04055  821416 ..  821426 -  -6.8  -3.85698   CGCCCGCGCCACAAA                 CGGT GAC ACCG                 ACTCCCGCTCCCGAA  65 440
 SCL_RS04020  817481 ..  817492 -  -7.2  -4.11692   GACGGACGCGCAAAA                GCGG CGCG CCGC                 TGACGCGAATCGTTA  74 38
        metG  811967 ..  812000 -  -5.2  -3.73775   TTGACGTGCATCAAA     CGCGCTGACTGCGTC ACAAG GCCGCAGCCAGTG-G     CAAACTGGCGGGTTA  58 38
 SCL_RS03995  811212 ..  811243 - -14.4  -3.21099   TCGCCGTATCACCAA      CCCCCCTCTCCCGC GCGA GCGGGAGAGGGTAA       GGGGAGAGGGTCGCG  95 115
 SCL_RS03985 NONE
         nth NONE
 SCL_RS03975 NONE
 SCL_RS03970  807656 ..  807668 -  -4.7  -2.90392   GATTGGCCAATCAGA                CCCGG CGG CCCGG                TAAAAGTTTCGACCG  46 68
 SCL_RS03965 NONE
 SCL_RS03960  805953 ..  806010 -  -2.8  -4.56597   CTGGTGGCGCAAAAA TACGAGCCGCT-GCGGCAATTCTT-GTAG GAG CTGCCAAAAACCGTCGCGAGCGGC-CGTC AGTTTCAGCAGGGTG  67 144
 SCL_RS03910  794148 ..  794162 - -12.8  -2.98866   CCAGATTCAAATAAC               GCGGGC GAA GCCCGC               TCGAGTTTTACTATC  79 100
 SCL_RS03900  790900 ..  790925 - -17.6  -3.09718   CAAGGGCCAAAAGCA         CGAGGCCCGG GCAATG CCGGGCCTCG          GTCAGCAATTACGCC 100 48
 SCL_RS03895 NONE
        argF NONE
 SCL_RS03885  787220 ..  787257 -  -5.6  -3.39895   GGCCTGATCAAGCAA   TTCACCGGCGTGTC CGATCCCTAC GAGACGCCGGTCAA    CCCCGAGATCGTGGT  55 293
 SCL_RS03875  782986 ..  782999 -  -3.7  -4.46212   GCGCTGATGATAAAA               CGCGG AATT CAGCG                GCGGGAATTCGCCCA  66 20
 SCL_RS03870  781078 ..  781096 -  -6.6  -3.28745   GCGGGAACAATCTAA             CAGATGCC GGG GGCAGCCG             CCCAGCCGCCCAGCC  56 138
 SCL_RS03865  780581 ..  780606 - -12.5   -5.0133   CATCGGCGGAAAAAA         CACCGGGCGCC GCGA GGCACCCGGTT          TTATCTGCGTCAGGA 100 48
 SCL_RS03860 NONE
 SCL_RS03855 NONE
 SCL_RS03850  778192 ..  778205 -  -2.3  -4.82901   CGGTGCGTATAAAAA               GCAGC CCGA GTTGC                AGCGTTTCATCCGCG  74 106
 SCL_RS03840  775225 ..  775247 -  -5.5  -3.17075   GGCGCGGTAACGCAA          GGCAG-CCGG ATCG CGGGTCTGCC           CGTGCCCAAGGACAG  51 79
 SCL_RS03830  772681 ..  772691 -  -5.4  -3.65199   AAGCGTCCATGCAAA                 TACG CGC CGTA                 ACGGCAAATACCGGA  58 89
 SCL_RS03825 NONE
 SCL_RS03820  770032 ..  770042 -  -4.6  -3.37028   AGGAACACCGGATAA                 CCGC CGG GCGA                 GCCGAGCACGTGGCT  51 265
 SCL_RS03740  753111 ..  753164 - -14.4  -4.12188   CGAGTATGTCGAAAA CTCCGTTGCCTCGCCAGGGACGGC TGACAT GCCGTCCCTGGCGTCGCGACTAGG GCTTCGATAGGCCCG 100 139
 SCL_RS03730  752130 ..  752141 -  -7.2  -3.17723   TGATTTCGAAGGGAA                GGCG ACCG CGCC                 CGCCGGTGCGCGCCG  59 43
 SCL_RS03720  750513 ..  750542 -  -7.1  -4.29738   TCAGATCGATTAAAA       CCGGTACGCATGCA TCC TGCCTGGG-ACCGG       CAGGTGAAATACGTT  74 99
 SCL_RS03715  750070 ..  750080 -  -2.4  -2.51547   TCGTGATATTAACAG                 CGCG CAT CGTG                 ACTCCTTATTTTTGA  38 31
 SCL_RS03710  749583 ..  749616 - -29.7  -4.17316   AGCCCGGCAAAAGAA     GAGAGGGGCGCGCCG GAAC CGGCGCGCCCCTCTC      AGCGTGAGCCGGTCT 100 39
        amrS NONE
 SCL_RS03675 NONE
 SCL_RS03670 NONE
 SCL_RS03665 NONE
 SCL_RS03660 NONE
 SCL_RS03655  738235 ..  738255 -  -6.7  -3.14463   AAGGGTTGTCACGAA            CTCGATCCC GGC GGGAGCGGG            GCGGACGACCTTCTG  53 511
 SCL_RS03640  734286 ..  734296 -  -5.4  -3.14564   GGATGTGGCGATTAA                 TGAC GGT GTCA                 CGCTTTATATTGGCC  50 440
 SCL_RS03485  696681 ..  696704 -  -2.4  -3.57971   AGATGCATGCGGAAA          CCGGA-AATGA CCC TCAATGCCCGG          GATTTTGACCCATCG  47 51
 SCL_RS03480  695351 ..  695365 -  -3.6  -4.79223   TTACAGGATTAAAAA               TCTTGT GAA ACAAAA               ATCCTGTTAATCCTG  72 77
 SCL_RS03475 NONE
        prmC  693344 ..  693365 -  -6.5  -2.79456   AACCGAATTGAATTA           CCG-GCGGCC CCC GGCCACGCGA           GCATGTCCGGTCAGG  52 1
 SCL_RS03465 NONE
 SCL_RS03460  692145 ..  692159 -  -9.2  -2.90054   TAGTAAAGGAGTATA               GACGCC GTC GGCGCC               GTCGCTAGCGCACGG  62 30
 SCL_RS03455 NONE
 SCL_RS03450  690360 ..  690370 -  -5.4  -4.18018   GCGCGCGACTCAAAA                 GCAA TAA TTGC                 GGTTCTCGCACCGCG  65 188
 SCL_RS03400  680718 ..  680767 - -12.3  -2.82327   TCGTGAGATGTAAAT CGTGATCCGTGAATCGTAAACCA AACA CGATTTACGACTTACGATTCACG GTTTACGGATCACGG  72 49
 SCL_RS03385  678303 ..  678319 -  -2.3  -3.57263   AGCGCGAGGCGGAAA              CGAAA AAGGACA TTTCG              GTTTTCCCCCTGGCG  49 355
 SCL_RS03375  677131 ..  677143 -  -6.2  -4.25566   AACAAGGACCGAAAA                CCCG GCTCA CGGG                ATATCTCATCGCGGG  71 108
 SCL_RS03360  675181 ..  675205 -  -4.2  -4.39828   AATACCCGGAGAAAA         GCCA-GCCCGC ATTC GCAGGCATGGT          GCGGCGCGTCATTCC  68 34
 SCL_RS03355  673550 ..  673568 -   -16  -2.89971   CCACGACAGATCATA             CGCCGGAG TTT CTCCGGCG             TCCAAGCACCTGAAG  87 74
 SCL_RS03350  672884 ..  672929 -  -4.1  -3.73068   GCTGTAATTGAATAA CCGACTTGCGGGGACAA-GCCA TTGCC TGGCATTGCCCCCGCT--TCGA CGTCAGATAAGGAAA  53 84
 SCL_RS03345  670986 ..  671001 -  -6.1  -3.68222   TTTGAAGGCGAACAA              CACGG TTTTCG CCGTG               CGGAAAACATTCAGC  60 321
 SCL_RS03330  667715 ..  667732 -  -6.9  -5.41143   GACGGCGGAAAAAAA             TCCGCGC CGCC GCGCGCA              GGAAGGATCCCATCG 100 334
 SCL_RS03310  662875 ..  662895 - -16.1  -4.82901   TCGGTTGTATAAAAA            GCGGGCGCC TGG AGCGCCCGC            TTTCCATCCCTGATC 100 52
 SCL_RS03300  661864 ..  661912 - -19.1  -2.81464   GTAGGATGCATGACA TGATGCAAACAAAAACCCCGCCA ATA TGGCGGGGTTTTTGTTTTGATCT CTCAACCGGCCGGCA 100 57
 SCL_RS03285  657792 ..  657820 -  -9.6  -3.46936   AAACGGCAGGAAATA       CCTGA-AGGCGCT CAAC AGCGCCTATCCGG        CGGTGGAGCTGGTGG  65 217
 SCL_RS03230  648801 ..  648811 -  -4.6  -4.45664   GCAAGGGAATCAAAA                 CGCA TTT CGCG                 AGCCATTACCGGGAT  71 427
 SCL_RS03205  643185 ..  643202 -  -6.2  -3.96148   CCGTGCCATGACAAA             GGCGCG CCGTTC CACGCC              GGCAAGAAAACGATC  65 478
 SCL_RS03195 NONE
 SCL_RS03190  642352 ..  642366 -  -2.8  -2.73243   ATCCACGTTTTAAAC               GGCA TTCTCGC TGCC               TTCGAGCCATTCGTA  41 5
 SCL_RS03185 NONE
 SCL_RS03180  641581 ..  641607 - -16.6  -5.55698   CACAATGCAAAAAAA         TATCCCGCGCAC GAA GTGCGCGGGAAA         GCAGACAAGAGATAA 100 45
 SCL_RS03160 NONE
 SCL_RS03155 NONE
 SCL_RS03150  635254 ..  635270 - -15.1  -5.35224   GGGACAAAAAGAAAA              GCCGCCC GGA GGGCGGC              TTTGTTATTTAAACC 100 78
 SCL_RS03145 NONE
 SCL_RS03140 NONE
 SCL_RS03135 NONE
 SCL_RS03130  630679 ..  630695 -  -2.1  -3.40299   CGACGACATCGACAA              CGGTGCC GAG GCCAGCG              ACTATCCGGTGGCGG  47 248
 SCL_RS03105 NONE
 SCL_RS03100 NONE
 SCL_RS03095 NONE
 SCL_RS03090  624034 ..  624089 -  -3.4  -3.28708   GAAACCGCAGATGAA CGCTGATTAACGCAGATTGGAA GCAAAGGTGGTT TTTAAATCTGCGTTCATCTGCG GTTACAAATTATTAC  45 37
 SCL_RS03085  623054 ..  623067 -  -6.7  -3.23335   TCCTAGAAATATAGA               TTCCC TTTC GGGAA                ACTCCTCCCTTTTGG  56 146
 SCL_RS03080  620968 ..  620982 -  -6.4  -4.14615   AAAAACCTGCCAAAA               CCCTGA ATT TCAAGG               ATAGCCGCCGGGACA  67 94
 SCL_RS03075  618241 ..  618274 -  -5.9  -4.77165   CGTGGTACAAGAAAA     CCG-GCAGGCTGGAAG CGG CTTCAGACCCGCGCGG     CGAGGGCGGCGCGCA  78 61
 SCL_RS03040 NONE
        ftsE  609826 ..  609842 - -10.1  -3.70622   GGACGTAAAAGAAGA              CCTGCGC GTG ACGCAGG              AAATAATTCTTGATC  74 39
        rpoH  607882 ..  607911 - -13.7  -5.32882   GATTATGATAAAAAA       CAAAAGGGCTTCC TCGC GGAAGCCCTTTTT        ATTTGCTATGCAAAA 100 48
 SCL_RS03015  605211 ..  605225 -  -4.2  -4.44797   CGATCAAGATCAAAA               TCCGGA CCT TGCGGA               AAAAGCGCGATGAAA  69 138
 SCL_RS03005  603743 ..  603764 - -17.3  -4.00124   CACCGCATAACGAAA           CAGCCCGGC ATCT GCCGGGCTG            TTTTTGGGAAAAACT 100 48
 SCL_RS03000  602926 ..  602954 -  -8.2  -2.85402   GAAATCAGTATTAGA       CTG-GATTCCGGC TTTC GCCGGAATGACAG        ATTCGGATGTTTTTT  57 60
 SCL_RS02995 NONE
 SCL_RS02990  601153 ..  601164 -  -5.8  -3.33815   AGGTGTGTCAAGCAA                CACG GTCT CGTG                 TCCTCGGTGTTGTCC  56 159
 SCL_RS02985  600504 ..  600516 -  -3.3  -4.11216   TCGTCATCGTGAAAA                TCCGC TTC GCCGA                TTTCCGCACCATCAC  61 342
 SCL_RS02970 NONE
 SCL_RS02945  591937 ..  591953 -    -3   -3.1158   AAATGAATGCTAATA             GTG-GTC TGCT GACTCAC              GCTTGATACCATGCC  43 3
        aprB NONE
        aprA  589464 ..  589487 - -11.1  -6.13503   CACCAAGAAAAAAAA          GGCCAACAT ATAAAA ATGTTGGCC           TTTTCTCATGCAAAT 100 84
 SCL_RS02930  589027 ..  589042 -  -5.4   -4.1523   CCTATTATAGATAAA              GCTGTC TTAA AACAGC               GTAGCGCCAAAGATT  65 16
 SCL_RS02925 NONE
 SCL_RS02920  587104 ..  587122 - -10.3  -4.62441   TCGGATATAAATAAA             GCACGCT ATAAA AGCGTGC             ATATCACAAACTAAA  95 374
 SCL_RS02890 NONE
 SCL_RS02885 NONE
 SCL_RS02880  580103 ..  580130 -  -6.8  -3.76482   CTACATGATGAACAA        GGGCGAGTGCGC CGGC GCGCGCTCGTTC         GTCGACGCCATGCCG  62 326
        pilB NONE
 SCL_RS02765  554670 ..  554680 -  -2.4  -4.68424   GAATGGACGCAAAAA                 GCAG TAC CGGC                 CTGGAAGATTAAACG  68 34
 SCL_RS02760 NONE
 SCL_RS02755  553025 ..  553037 -  -2.6  -4.56775   ACGCTCTGGCAAAAA                CGCG GAGGA CGCA                GAGGCACAGAGCACA  65 122
 SCL_RS02640  527323 ..  527347 -  -9.9  -3.14132   GGTGCTGGTGATGAA          CGGCGCGGAAG ATC CTTTCGTGCCG          GCAGAGCAGATTGCC  64 395
 SCL_RS02630  525367 ..  525377 -  -8.2  -3.84961   GAGCCAATGATGAAA                 CCGG AAT CCGG                 CGGCGGCCCTGGCTG  71 130
 SCL_RS02625  524624 ..  524665 - -21.7  -5.48514   ACGAACAAAGAAAAA GGCCGGTACGCATCCCGCCA GAG CGGCAGG-TGCATACCGGCC TTTTCGGATTACTTA 100 43
 SCL_RS02620 NONE
 SCL_RS02615  522336 ..  522346 -  -2.4  -3.59979   CTCGGCGACGCCAAA                 GCGG CGG CTGC                 CTTTACCACCAATCC  49 110
 SCL_RS02590 NONE
 SCL_RS02585  514338 ..  514357 -  -5.6  -2.64747   GCATTCTACCACAAT            GAGTTCCC CGAT GGGACCCC             TTGCGGACGGATATT  46 130
 SCL_RS02580  513847 ..  513876 - -19.5   -3.5936   GGTAAAGGCCTGAAA       CAAAAAACCCCGC CATG GCGGGGTTTTTTG        TTGGTGTAGCTGAAA 100 42
 SCL_RS02525 NONE
 SCL_RS02520 NONE
 SCL_RS02515 NONE
 SCL_RS02510 NONE
       rfaE2 NONE
 SCL_RS02500  497461 ..  497482 -  -5.1  -3.79251   TATCGTACGAGTAAA           TGCGGTATGG AGC CC-TACCGCC           CGTCCGCCCGAAACC  61 68
 SCL_RS02495  496171 ..  496181 -  -8.2    -3.737   GAAGCGGCGAGGAAA                 GCCC GGA GGGC                 GTCAAGCTGCTGGCC  69 512
 SCL_RS02485  495189 ..  495220 -  -7.9   -3.1637   ATAGATTTTCACTAA      TTCCCCCTCTCGC GCCTGA GCGGGAGAGGGTA       AGGGGAGAGGGCGCA  59 72
 SCL_RS02480  494177 ..  494189 -  -2.6  -2.72227   AATATCGCGCAAGTA                CCGA GGATA CCGG                TAATAACGCCTGAGC  39 115
 SCL_RS02475  493563 ..  493593 - -13.3  -4.42653   ATCGCAGGCACAAAA       TTCTTCCCCCGCC CGACC GGCGAGGGAAGAG       AGACGCCACTGCTTG 100 56
 SCL_RS02470  492987 ..  493000 -  -4.5  -3.53012   CCGCGGCGCGCCAAA               GCACCG CGC CGG-GC               AAGGCGATTCGGCCA  52 45
 SCL_RS02465  491164 ..  491175 -  -4.4  -3.53811   GGGATGTCCGGCAAA                TGAC CGGC GTCA                 AGGACCGGCGCGGCG  52 45
 SCL_RS02460  490781 ..  490807 -    -5  -3.55444   CCTTCACGCTCGAAA         TCCCCGACATCG AGA CGCTGTCGCGCA         TCCTCGCGCTGCTGG  55 120
 SCL_RS02450  487720 ..  487735 -    -6  -2.52464   CGTCCGCGGAATCCA              CCGCGC GCCA GCTCGG               CCTTACCGGATGGGT  45 212
        aspA NONE
 SCL_RS02430  483541 ..  483561 -    -9  -2.70932   CGTGGTGCCGAATTA           CCGTGTGCG GCTG CGC-CACGG            CCTGATCGGCAGCCT  57 277
        arsC  482238 ..  482262 -  -9.4  -3.31144   CCGCGAGCGCCACAA         GCTTGATGCCG GTCG CGGCATCAA-C          AACTTCAGGAAAAGC  63 270
 SCL_RS02395  478047 ..  478057 -  -6.8  -4.82901   TTTCGTTCATAAAAA                 CCAG GTT CTGG                 AAAGAACGCGGAGTA  81 182
 SCL_RS02390  477338 ..  477357 -    -2  -4.07568   TTGGCGGCGGGAAAA            CCCGCCTG AAAA CAGGTGAA             TTAGCCGGTTTCCGG  56 26
 SCL_RS02385 NONE
 SCL_RS02380  475993 ..  476008 -  -2.5  -2.75064   GTTGTGAGTGAACTA              GACCT GGATAT AGGCC               CATCCCTGGTTTTGG  39 7
 SCL_RS02375  475470 ..  475489 -  -9.2  -6.09888   CCGGAACAAAAAAAA            GCCCGCGA TGCG TTGCGGGC             CGGAGGAGAGAGACG 100 51
 SCL_RS02370  473620 ..  473652 -  -8.4  -3.40112   AGTATACTCGAAACA     GGCACTTTCCGCGCG TTAT CGCGCG-AAATAGCC      GATAATCGCGCCCAC  64 386
 SCL_RS02360  472319 ..  472368 - -16.7  -3.22113   ACCTGGGGATAAAAT CAT-CGCCAACAAAAAAGCCCGCA ACG TGCGGGCTTTTTTGTTGGTACAAG TGAGTTATCAGGCCG 100 33
       coaBC NONE
 SCL_RS02330  468543 ..  468558 -  -7.5  -3.85817   ACCCGTGGTGATAAA              CCGCG GATGCG CGCGG               TGGAAGACGGGACTA  68 38
 SCL_RS02325  466880 ..  466890 -  -4.6  -4.67982   CGCGATGCAACAAAA                 GCCG CGT CAGC                 TGGACATGATCTGCT  71 21
 SCL_RS02320  465387 ..  465402 -  -2.5   -4.5774   GACGAACAACTAAAA              GGGCA GTGCAA TACCC               GGCCGCACGGAAAGC  65 4
 SCL_RS02310  464025 ..  464047 -  -3.3  -4.66537   GTCGTGAACAGAAAA          CGACGCGCGC CAAC GCAGGCG-CG           GGAGAGAACTACAAG  67 34
 SCL_RS02305 NONE
 SCL_RS02300 NONE
 SCL_RS02295  458551 ..  458563 - -10.5  -2.87564   GGAGCCGCTCATACA                GGCGC AAC GCGCC                ATCAAGGCCATGCAG  61 181
 SCL_RS02285  457757 ..  457770 -  -3.7  -2.87463   AACGGTTCCGACAGA               CCGGC GCTG GCCTG                ATTCCGGCGTTCCCG  44 55
 SCL_RS02245 NONE
 SCL_RS02240  447022 ..  447037 -  -2.4  -3.61398   GTGCGGTGCCAACAA              CGGCGC GATC ACGGCG               GTGGGTCTGGTGTTC  49 288
 SCL_RS02230 NONE
 SCL_RS02225  443365 ..  443375 -  -3.2  -3.21099   CTGCCGCAGCAGGAA                 GACT AGA AGCC                 ATCTCAAAACCTGCT  45 163
 SCL_RS02205  440310 ..  440368 -  -8.2  -2.72991   GCAGACTGCTAACCA TCCGTTGCAGCCGACCCGTTCGGGCGAGGC TGC GCC-CGCCTGCACGGA-CGGCTG-AACTG- ACACGTCAGACCATG  57 469
 SCL_RS02165 NONE
 SCL_RS02160  433427 ..  433451 -  -9.9  -4.57569   CTACCGCCCGAAAAA          TCCGGTGACGC TGG GCGCCACCGAG          CGTGCCGAGGTCGAG  95 167
 SCL_RS02100  421272 ..  421286 -  -4.2  -3.54424   GCGCATGGGCGCAAA               CCGG CTGCGCC CCGG               ATGCGTGCAATGTGT  52 55
 SCL_RS02095 NONE
 SCL_RS02090  418420 ..  418435 -  -2.5  -4.25104   GGTCTGGCACGAAAA              GCC-CG GAATT CGCGGC              CAAATGCGCGGGGAT  60 128
 SCL_RS02085 NONE
 SCL_RS02080 NONE
 SCL_RS02075 NONE
 SCL_RS02070  414989 ..  415006 -  -8.5  -4.15044   TTCCGCCGCAAGAAA             TGGATCT GAAA AGATCCA              GCCGTTTCCAGGCGG  77 44
 SCL_RS02060  412713 ..  412728 -  -6.8  -4.25104   GTTCGCTCAGGAAAA              CAGGGT CAAT ACCCCG               GTGAAGCCGTACAGC  74 1
 SCL_RS02055 NONE
 SCL_RS02015  406629 ..  406651 -   -17  -5.65927   GACTCAAATAAAAAA           GGCGCTGCCA TTC CGGCAGCGCC           TTTTTTTATCGGGCA 100 57
 SCL_RS01965  396976 ..  397031 -  -5.8  -4.22948   AAAAGGCAGTGAAAA GTTAAAAGTGCAAAGTTAAAAG TTAAAAAAACGC CGTTCAACTTTTCACTTTTAAC TTTTCATTTTTCATT  71 46
        trmL  370303 ..  370320 -    -4  -3.40403   CGTGCTGTACGAGAA             GCTGCC GCCCCA GGCCGC              GGTCGAGACGCTGCT  51 187
 SCL_RS01805  365895 ..  365911 -  -2.2  -3.06696   CTCGGCGTGAAGACA              GCGG AAGATATCA CCGC              GTGCGTCAGGTGCGG  42 31
 SCL_RS01800  364669 ..  364690 - -10.1  -3.14132   GCTCCGTTTGATGAA           CCGCCCG TGATGCGC CGGGCGG            GAATAATAGCGGTCG  67 41
 SCL_RS01795  363272 ..  363291 -    -5  -2.55351   TTGCGCCAGAGGAAC            CAGG-ACGG TCG CCATTCCTG            TGCCTCTCAGTTGCT  46 32
 SCL_RS01790  362664 ..  362719 -   -28   -2.9176   AACTTTAGCCACAGA GATCACAGAGGGCACAGAGAAAGAAA TTGG TTTTTTACTCTGTGCCCTCTGTGATC TCTGTGGCCAGTTTT 100 44
        phoB NONE
 SCL_RS01755  356003 ..  356017 -  -5.6   -3.1247   ATTGGTGACAGCGAA               TCAGGC GAT GCCGGA               AACGGGGTGGTCGAC  50 11
 SCL_RS01750  354286 ..  354311 - -13.3  -5.40474   AGCCGGCCAAAAAAA         GAAAAGGCCGC GTAT GCGGCCTTGTC          AGTCAGGAGCTCCGG 100 107
 SCL_RS01745  353516 ..  353549 - -12.7  -3.79445   AACCATCAACCTAAA     TATATGCCCGAACAT ATAT ATGTTCAAGCATATA      TATAAAACGCCTGAT  90 127
 SCL_RS01740 NONE
 SCL_RS01735 NONE
 SCL_RS01730  351829 ..  351841 -  -3.3  -2.71924   TATGTCGTGCCAAAG                TGCTC ATG GCGCA                GCTCCCCCGCGCAAC  41 16
 SCL_RS01725  351536 ..  351550 -  -2.1  -3.01712   GGCCGTGCCTGAATA               TTCCG GCGTT CAGAA               TTTGTAAAAATGCGT  42 20
 SCL_RS01720 NONE
 SCL_RS01715  350381 ..  350393 -  -3.3  -2.52464   CCGTGCCCTAACGGA                CAAGG ACC CCGTG                GCGCATCTTTGCCGC  40 5
 SCL_RS01710 NONE
 SCL_RS01705 NONE
 SCL_RS01700 NONE
 SCL_RS01695 NONE
        arsC NONE
        arsB NONE
 SCL_RS01680 NONE
 SCL_RS01675  344232 ..  344284 - -33.2  -2.87132   TTGCGGGGCGACACA TC-CCTGCGTCATTGCCGGTTCGTT TTTC AACGAACCGGCAATGACGCAGGCGA AATGGCGGATCGGGT 100 42
        pstS  342898 ..  342919 - -17.3  -4.48449   TTATGAAAAGAGAAA           GCGGGGTCC TGAC GGACCCCGC            TGCACACGGCCTATT 100 57
        pstC NONE
        pstA NONE
 SCL_RS01650 NONE
        phoU  339528 ..  339544 -  -5.1  -3.52353   GACGCAAAAACAAAT              CTTGGAA TGA TTCCAGG              GGGGGGCGGTTATCG  55 35
 SCL_RS01640  338697 ..  338727 -  -2.5  -3.47227   GCGCAACCACGACAA      TGAGCAGGGTCATG CGGA CACT-CCCGGCTCA       GGAGTATTTGACGAT  47 23
 SCL_RS01635 NONE
        trxA  337068 ..  337086 -  -7.3  -3.41051   TCATCCTCAGTATAA             CCCCCGG GCATG CCGGTGG             AGGAAGTGACGGGAA  61 66
 SCL_RS01625  336152 ..  336167 -  -6.8  -4.08767   TTTACCGGGGGAAAA              GCCTAC CGGG GCAGGC               TAGTGGCGCGTCGGA  70 25
        typA  334231 ..  334257 -  -4.3  -3.53563   AGATTTTCCGGGAAA         CTGCCGCGACG GGTGT CGTTACGCCAG         TGGAATCAACCGGCT  52 31
 SCL_RS01615  333530 ..  333558 - -21.9  -3.53012   GGCCGTGGCGGGAAA        CAGAAAACCCCGC CAG GCGGGGTTTTCTG        TCCGGTCAAGAACGG 100 49
 SCL_RS01610 NONE
 SCL_RS01605  331518 ..  331548 -    -4  -3.16881   GATCGACTTCATCAA      GATCGACGGCGCG TTCGTG CGCGACAT-GATC       GATGACGAGGTCGAC  47 286
 SCL_RS01575 NONE
 SCL_RS01570 NONE
 SCL_RS01565  323352 ..  323365 -  -3.9  -3.10732   AGACGAATCGCAACA               TTGAT TAAA ATCAA                CCTTGGCAAGATATT  45 40
        hppA  321190 ..  321215 - -19.1  -4.58395   TGTATCTCCCAAAAA         CAAAGGCCGGC GAGC GCCGGCCTTTG          TTCACGAATGAAGCG 100 44
 SCL_RS01555  320133 ..  320144 -  -2.2  -3.45707   GAAACACTCAAAAAG                GTGCG CTC CGC-C                GGACTCAAAGTCTGC  47 487
 SCL_RS01520  313135 ..  313163 -  -4.5   -3.5764   AACTCGACCGCGAAA       CG-CTGGCCGCGC TCCAG GC-CGGCCGGACG       GCTGGCCTGGAAACC  53 488
 SCL_RS01475  306324 ..  306344 -  -9.6  -2.55668   GAGGTTGAGAGCAAG            TCCGGCCG GGACT CGGCCGGT            TTGTTTCGGCGCGTG  63 183
 SCL_RS01470 NONE
 SCL_RS01465 NONE
 SCL_RS01460 NONE
 SCL_RS01455  303268 ..  303287 -  -7.8  -5.41143   TACTTCGTAAAAAAA            CCCCGG TCGCCAAG CCGGGG             TTTTTGTTTGTACCT 100 57
 SCL_RS01445  300262 ..  300283 -  -7.9  -3.01791   ACGGGCTGGTGAATA           CCGTCGGCGG GTT CCGCGG-CGG           CAAGCCGGTGCACGA  54 484
 SCL_RS01415 NONE
 SCL_RS01410 NONE
 SCL_RS01405 NONE
 SCL_RS01400 NONE
 SCL_RS01395 NONE
 SCL_RS01390  289549 ..  289564 - -11.8  -3.63627   GCGTCAGATTTCAAA              CCCCGC GCCC GCGGGG               TTTATTTTTTGAAAA  83 146
 SCL_RS01385 NONE
 SCL_RS01380  287000 ..  287035 - -11.9   -3.5393   ACCATCGTGTCGAAA   CACACCGAGCC-GCGCG CGAA CGCGCAGGATCGG-GTG    CCCTACACGGTGGAC  75 312
 SCL_RS01340  279008 ..  279021 -  -9.5  -3.01712   TTTGCGGCGGCAACA               CGCGC GTGC GCGCG                CACCAGCTCACCAAC  60 217
 SCL_RS01275  262699 ..  262726 -   -17  -5.09426   TTCAATTGGAAAAAA        CCAAGGGCGGGG GAGA CCCCGCCCTTTG         CGTTGGCGCGCGGCT 100 40
 SCL_RS01225 NONE
 SCL_RS01220  249996 ..  250031 -  -3.3  -4.14739   GGAGGGAGTGGAAAA   CA-CCGCGCAGCGTG ACTTTCTG CAGGC-GCGCGGATG    TAACCTGATGCAAGG  61 123
 SCL_RS01210 NONE
 SCL_RS01205  243953 ..  243972 -  -2.1  -4.07568   GTTGCGCGCGGAAAA            GTGTTGA TCAAGG TCAACTC             GCAGCCGGATCACGG  56 66
 SCL_RS01200  242665 ..  242717 - -12.8  -3.62597   TGTAGGGCGCAATAA GCG-CAG-CGCATTGCGCCGCATGTA ATC TGCATCCGGCGCATTACGGCTGTCGC CTAATGCGCCCTACG  86 53
 SCL_RS01190  241267 ..  241279 -  -4.1  -4.30719   GGCCGCCACAAGAAA                CCAAG TTC CTTGA                GTCGCACCGGCCGCC  64 171
 SCL_RS01185 NONE
 SCL_RS01180 NONE
 SCL_RS01175  238437 ..  238454 -  -5.5  -3.08032   TCGCCTGCAAAATCA             GCCACAA CGAC CTGCGGC              AAATCCTCGAGTTGA  49 423
 SCL_RS01150  234990 ..  235041 -  -6.3  -4.23892   TGGAATCAGTGAAAA GTTAAAAGTGTAAAGTGAAAA GTTTATGAGG TTTTCATTTTACATTTTTAAC TTTTCATTTTTCACT  71 46
        moaB NONE
        moaC NONE
 SCL_RS01135  233546 ..  233579 - -16.7  -4.57755   ATGCATGAGACAAAA     CGCGACGCCCGGC AATTTGGG GCCGGGCGTTGCG      ACGGGCCGTACGCTA 100 38
 SCL_RS01130  229854 ..  229906 -  -4.6   -3.2794   CTTGATGGAGATCAA GCCGGTTTGAAGCGCCCAACGTTG GGGTT CGGCGCTGCGCGCCTCACCCCAAC CTACATTAAAACCAA  49 53
 SCL_RS01125 NONE
 SCL_RS01120  228865 ..  228881 - -15.1  -5.42605   GGAACAAAAAGAAAA              GCCGCCC GAA GGGCGGC              TTTGTTATTTACTTC 100 80
 SCL_RS01105  226359 ..  226371 -  -3.3  -2.56596   GCCGTTATCAACTTA                GGGGA ATG TCGCC                TGCTTCTGCATCACG  40 41
 SCL_RS01100  225950 ..  225963 -  -3.7  -3.28497   CCAGTTTAAACGCAA               GCGGC GGGA GCGGC                CAGAAACGGGATCGA  47 72
 SCL_RS01095  225141 ..  225154 -  -5.2  -4.41348   CCTGCCTTAAACAAA               GCCG TCATTC CGGC                GCAAGCCGCAATCCA  70 111
 SCL_RS01080  222432 ..  222461 -  -5.1  -2.79273   GGTGGTGAAGAGAAT       CGATTCAGCTTTCG AGG CGAAAAATGA-TCG       GCACGTCGACCCAGG  47 0
 SCL_RS01075  220385 ..  220414 - -11.5  -3.44255   AGAAGCAGGCAAACA       GGCGCAATGCGACA AGA TGTCGCACCG-GCC       GCCAACCGCCGTCAG  75 43
 SCL_RS01070  219339 ..  219351 -  -4.7  -5.04601   CCGATAAAGGAAAAA                CCCGG TGG CCGGC                CGTATCAGAACCGCC  80 30
 SCL_RS01065  217247 ..  217265 - -12.4  -3.16564   CGGCCAGGTGATGAA             GGCCTCGC AGG GCAAGGCC             AATCCGGCGCAGGTC  70 91
 SCL_RS01045  212873 ..  212890 -  -2.7  -4.06562   AACGTTAATCATAAA             TCAT-GCG CGC CGCGACGA             TGCAGGAGCAAGCCT  56 73
 SCL_RS01040 NONE
        mreD  211529 ..  211546 -  -2.6  -3.34192   AATCCTCTCAAGCAA             TGCCGC CGCGTC GCCGCA              GGTCGCGCAGGATGA  45 0
        mrdA  209414 ..  209436 -  -6.3  -3.42768   ATGAAAATTGGACAA          CGGAGCGCAGC GAC GCTG-GC-CCG          AGCGTTAGCGAGGGC  56 195
 SCL_RS01025 NONE
        mltB NONE
 SCL_RS01015  206304 ..  206362 -  -3.5  -2.65442   ACAGGATTCACAGGA TTAACAGGATTT-CTTG-TTCGCAAGATT TTT AATCCTGTAAATCCTGTAAATCCTGTTAA TCCTGTCTATTGATT  42 53
 SCL_RS01010  205097 ..  205109 -  -3.3  -4.09685   TGCCATGTGCGAAAA                CAGCA GAC CGCCG                CAGCGCTTCTGCCTT  58 70
 SCL_RS01005 NONE
 SCL_RS01000 NONE
        lipA NONE
 SCL_RS00990  201352 ..  201373 -  -6.5  -3.30441   CATCATCGGTTACAA           CGTGCTCAA GGAC TCGAGCTCG            CCGCTGTTGCGCATG  55 405
 SCL_RS00980  199704 ..  199725 - -10.8  -4.20868   TGCCCAAAATAATAA           GGGCCGGC GTCCAT GCCAGCCC            TGATTGTTTTGAAAC  86 50
 SCL_RS00960 NONE
 SCL_RS00955 NONE
 SCL_RS00950 NONE
 SCL_RS00945 NONE
 SCL_RS00940 NONE
 SCL_RS00935  193621 ..  193634 -  -8.1  -3.55444   GGTGTATTCGCGAAA               GGCCT GATC AGGCC                GCGTCGCCGTTCAAT  65 19
 SCL_RS00915 NONE
 SCL_RS00910 NONE
 SCL_RS00905 NONE
 SCL_RS00900 NONE
 SCL_RS00895  187986 ..  188021 -  -8.9  -2.79183   GGGAGGGGCATTATA    GGGAGCCCGCCGCCT CAATTC AAACCGCGGGATCCC     CTGAATTCCAGCCGA  60 51
 SCL_RS00890  187755 ..  187778 -  -7.4  -4.15788   AACGCCGTCAAGAAA          GGTGACAACG ACCA CGTCGTGACC           TGCCAGGACGGCAAC  72 128
        tsaD  180676 ..  180702 - -15.3  -3.36515   GGCGAGCCGGAAACA         GACGAAGACAC TTAAC GTGTCTTCGTC         CCGGCGAGCGCCCCG  95 245
        folB NONE
        folK  178816 ..  178834 -  -7.4  -3.17051   GCTGCATCATCAACA             TCGCCG ACATCTA CGGCGA             TCGCCCCTTGATCGG  56 338
 SCL_RS00830 NONE
        mtnC  176093 ..  176104 -  -5.8  -3.62096   CCCGAGGAGGTCAAA                CAGG ACCG CCTG                 GCGCGCTTCATGGAA  57 268
 SCL_RS00805  171831 ..  171842 -  -2.2  -5.04249   TTGTGAAAAAAGAAA                CCAC ATAT GTGA                 AGGGAAAAGACTTTG  74 277
 SCL_RS00780  165753 ..  165771 - -13.1  -3.85698   GTTTGTTCGTACAAA             CGGCCGG TTATT CCGGCCG             TTTTGTTTTAATTAC  90 37
 SCL_RS00730 NONE
 SCL_RS00725  154186 ..  154200 -  -3.5  -3.14344   TAGTCGCGGGATGAA              CGC-GC GGGT GCAGCG               ATGGTTTTGCATATT  45 121
 SCL_RS00720  153313 ..  153338 -  -6.1  -3.64703   CTGCTGGCACTGAAA         GCCA-GGATAGC GCT GCTGCCCATGGC         GTTTCTGGTTTCACT  57 478
 SCL_RS00645  138864 ..  138886 -   -12  -3.40403   CCTGGGCGATTACAA           CGTCGCGC CGGAAGC GCGCGACG           TGCATGATCCCAAAC  74 358
 SCL_RS00620  134110 ..  134125 -  -2.4  -5.16841   TTATAGGAAGAAAAA              GCCGGC CTAC GCCATC               CACGACAACGGGAGT  78 16
 SCL_RS00615  133232 ..  133267 - -11.6  -3.85704   TCATCAATTATGAAA    GGACCGGCGGGCGCGG GACG CCGATCCCGGCGGACC     TGCTTTCCGCCTGCT  81 317
 SCL_RS00605  132685 ..  132695 -  -6.8  -3.72576   TTTGCCTGCATCAAA                 CAGG TTC CCTG                 CGTGACTTGCCGGGC  62 49
 SCL_RS00600  132241 ..  132253 -  -6.9  -3.53811   TGCACGGCGCGGAAA                CCGCC GCC GACGG                CCTCGGCATGCTGGT  59 230
 SCL_RS00570  127074 ..  127107 -  -7.3  -2.71712   CGGCGCGGCGGAAAG     CCACTGCGTGCTGCTG TAC CAGCCGC-CGCTGTCG     GAGATGGCGCGGGCG  52 311
 SCL_RS00535 NONE
 SCL_RS00530 NONE
 SCL_RS00525 NONE
        rdgB  116820 ..  116834 - -12.8   -2.7682   CGCAATTACAAATAC               GCGGCC GCA GGCCGC               TCGACTTTACGTGGG  76 134
 SCL_RS00515  115694 ..  115711 -  -3.5   -5.0538   GCGGAGCTTAAAAAA             CCTAACGT TGG AC-TTAGG             CCGCCGGTGTAGTCG  77 59
 SCL_RS00510  114711 ..  114723 -  -7.7  -3.86897   GTCAGCCGGGAGAAA                TCAGC TGC GCTGA                CTGGGCGCCGCCAGT  68 13
 SCL_RS00505 NONE
 SCL_RS00500 NONE
 SCL_RS00495  112522 ..  112533 -  -4.4  -3.80855   GGCGTCAAAAATCAA                TGAC ACCC GTCA                 AAAATCAGAACGGCT  58 30
 SCL_RS00490 NONE
 SCL_RS00485 NONE
 SCL_RS00480  107471 ..  107508 -  -6.8  -3.02511   CCCAGCTTCCGAATA   CCGTGCG-CGTGGCGGG AGCGG CCCGGCGCGACACGCGG   TCTACACGGCCGCGC  51 27
        katG  104085 ..  104114 - -17.1  -4.87665   TGGTACGGACAAAAA       GGCGCGCGGGACA TCTC TGCCCCGAGCGCC        CTGCAACGGATTACT 100 65
 SCL_RS00445  100626 ..  100643 -  -3.3  -3.53224   GACGCCTTCTGCAAA             CAGACCG GCAA CGAGCTG              GTTTCCTCCGAGCAG  49 112
 SCL_RS00425 NONE
 SCL_RS00410   92875 ..   92888 -  -4.5  -4.26076   GGAGCGCGACGAAAA               CGACG CCGC CATCG                TGCGCACCAGCGTCG  66 297
 SCL_RS00400 NONE
 SCL_RS00395   87753 ..   87781 -   -16  -3.65425   CGGAGAGACGGGAAA        CCACCGGCGAAC GCGCG GTGCGCCGGTGG        CATCATGGACTGTTG 100 288
 SCL_RS00390 NONE
 SCL_RS00385   85948 ..   85971 - -18.2  -5.72622   CCCACAAATAAAAAA          CAAGGGCGGC TGGC GCCGCCCTTG           TGGTACTGCGTTACG 100 53
 SCL_RS00380   85461 ..   85474 -  -2.5  -4.62471   GGTAATCCGGAAAAA               TAATT ACTG AATTA                TTTTCCCGGCCCACT  65 15
 SCL_RS00285 NONE
 SCL_RS00280   58617 ..   58629 -  -9.1  -3.85698   GTTCGGCGGGAGAAA                GGTCC ACC GGACC                TTTCTCTGTTTCCGC  73 176
 SCL_RS00275   56679 ..   56734 -  -5.4  -3.06261   GTTCAAGGTTCAAGA GTACAGGGTTCGGAGTACAGCACTGA ACTT TAATCTCTGTGCTTTGAACCCTGTAC GTTAAGGCAACTTTA  50 38
 SCL_RS00270   55625 ..   55638 -  -3.7  -2.71681   CAATCGCCTGAACGA               GCCGC CCAC GCGCC                GTGGCGTGATGCAGG  42 454
 SCL_RS00260 NONE
 SCL_RS00255   52796 ..   52814 - -17.4  -3.00525   TTCCTGGAAATTATA             CGGGCGCC TCG GGCGCCCG             TTTTTTTTGGTGAAG  93 114
 SCL_RS00235 NONE
 SCL_RS00230   47930 ..   47945 - -11.8  -5.47218   TGGTATTGAAAAAAA              GCGGCC GCAA GGCCGC               TTTTTTTTGGATTGG 100 54
 SCL_RS00220   46631 ..   46674 -   -22  -3.06315   CGAATACCCGGAACA TCAGTCAAACAAAAAGCCCC AAAA GGGGCCTTTTGTTTGACTGG CGCGCCCTAGAGGGT 100 154
         rnd NONE
 SCL_RS00175   35479 ..   35492 -  -5.3  -4.89063   TGATCGAAAAATAAA               CTGAA TAAT TTCAG                CGGGCGCGTGCCGCA  80 22
 SCL_RS00165   33213 ..   33230 -  -8.3  -4.57073   GAGCCGCTGGAAAAA             CCCGCCG ACAC CGGCGTG              GAGTGCCCGGAGTGC  86 311
 SCL_RS00140   27422 ..   27478 - -10.6  -3.62235   ATGAAAGAAAATAGA CAGGATTAACAGGATTTACAGGATT AAAACCGG AATTTTG-AAATCCTGTTAATCCTG TCCATTCTTGTTTTT  76 55
 SCL_RS00135 NONE
 SCL_RS00130 NONE
 SCL_RS00125 NONE
 SCL_RS00120 NONE
 SCL_RS00115 NONE
 SCL_RS00110   20072 ..   20088 - -11.5  -3.03338   ACAAGCGCTTCAAGA              CCCGCCC CCC GGGCGAG              CCCAGGTTGTATTAG  72 495
 SCL_RS00090 NONE
 SCL_RS00085   15955 ..   15972 - -10.5  -5.26119   GCCTGAAAAACAAAA             GCCCGGC TGTA ACCGGGC              TGAGTTTGAAGGTTT 100 435
 SCL_RS00075   14390 ..   14427 -  -4.8  -4.42062   CATGGGCGAAAGAAA   CGAACTCAACG-GGCCG CTCTC CGGCCACGTCGAAATAG   ACGAGACCTACATCG  71 482
 SCL_RS00060 NONE
 SCL_RS00055   11383 ..   11395 - -10.5  -2.84801   GACGGTGAAAGATTA                CGCGG TGG CCGCG                CTCCTGGCCTTGAGA  66 10
 SCL_RS00050    9732 ..    9766 - -12.8  -2.60079   GCATCTTATAACGTA     GGTTGGGTTGAGGCGC GGT GCGCCGAAACCCAACG     ATCATTCATTTTGCG  75 78
        metF NONE
 SCL_RS00040 NONE
         pip    7008 ..    7058 - -10.4  -2.62396   CAGCGGCGTATAGCA GCC-CTGCACGTC-GCCGATGGCG TAGAT CGCCATCAGCCGGCCTGCGGCGGC CGTCCCAGTTGCGTG  66 7
 SCL_RS00030 NONE
 SCL_RS00025 NONE
 SCL_RS00020    5003 ..    5034 -   -10  -4.82901   GCGCGCCGACAAAAA      CCAGAAGGTCGCCG ATAT CGGCGCCATGCTGG       AATGGCTGATGGCCG 100 310
