locus-tag class description SCD_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix SCD_RS00005 PF11638 DnaA N-terminal domain SCD_RS00005 PF00308 Bacterial dnaA protein SCD_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain SCD_RS00010 PF02767 DNA polymerase III beta subunit, central domain SCD_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain SCD_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus SCD_RS00015 PF00204 DNA gyrase B SCD_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS00015 PF01751 Toprim domain SCD_RS00015 PF18053 DNA gyrase B subunit insert domain SCD_RS00025 PF01132 Elongation factor P (EF-P) OB domain SCD_RS00025 PF08207 Elongation factor P (EF-P) KOW-like domain SCD_RS00025 PF09285 Elongation factor P, C-terminal SCD_RS00030 PF13368 Topoisomerase C-terminal repeat SCD_RS00030 PF01751 Toprim domain SCD_RS00030 PF01131 DNA topoisomerase SCD_RS00035 PF04361 Protein of unknown function (DUF494) SCD_RS00040 PF02481 DNA recombination-mediator protein A SCD_RS00040 PF17782 DprA winged helix domain SCD_RS00050 PF01327 Polypeptide deformylase SCD_RS00055 PF02911 Formyl transferase, C-terminal domain SCD_RS00055 PF00551 Formyl transferase SCD_RS00060 PF01189 16S rRNA methyltransferase RsmB/F SCD_RS00060 PF01029 NusB family SCD_RS00070 PF00989 PAS fold SCD_RS00070 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS00070 PF00672 HAMP domain SCD_RS00075 PF00072 Response regulator receiver domain SCD_RS00075 PF00158 Sigma-54 interaction domain SCD_RS00075 PF02954 Bacterial regulatory protein, Fis family SCD_RS00080 PF02705 K+ potassium transporter SCD_RS00095 PF01433 Peptidase family M1 domain SCD_RS00095 PF17432 Domain of unknown function (DUF3458_C) ARM repeats SCD_RS00095 PF11940 Domain of unknown function (DUF3458) Ig-like fold SCD_RS00100 PF00156 Phosphoribosyl transferase domain SCD_RS00115 PF07690 Major Facilitator Superfamily SCD_RS00120 PF01814 Hemerythrin HHE cation binding domain SCD_RS00130 PF00155 Aminotransferase class I and II SCD_RS00145 PF01790 Prolipoprotein diacylglyceryl transferase SCD_RS00150 PF00920 Dehydratase family SCD_RS00155 PF00437 Type II/IV secretion system protein SCD_RS00155 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SCD_RS00160 PF03190 Protein of unknown function, DUF255 SCD_RS00165 PF00034 Cytochrome c SCD_RS00170 PF00209 Sodium:neurotransmitter symporter family SCD_RS00175 PF01235 Sodium:alanine symporter family SCD_RS00180 PF01218 Coproporphyrinogen III oxidase SCD_RS00185 PF01300 Telomere recombination SCD_RS00190 PF02844 Phosphoribosylglycinamide synthetase, N domain SCD_RS00190 PF02843 Phosphoribosylglycinamide synthetase, C domain SCD_RS00190 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SCD_RS00195 PF02142 MGS-like domain SCD_RS00195 PF01808 AICARFT/IMPCHase bienzyme SCD_RS00200 PF02954 Bacterial regulatory protein, Fis family SCD_RS00205 PF01207 Dihydrouridine synthase (Dus) SCD_RS00210 PF01914 MarC family integral membrane protein SCD_RS00215 PF11008 Protein of unknown function (DUF2846) SCD_RS00220 PF04344 Chemotaxis phosphatase, CheZ SCD_RS00225 PF00476 DNA polymerase family A SCD_RS00225 PF01367 5'-3' exonuclease, C-terminal SAM fold SCD_RS00225 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SCD_RS00225 PF01612 3'-5' exonuclease SCD_RS00230 PF03641 Possible lysine decarboxylase SCD_RS00240 PF01636 Phosphotransferase enzyme family SCD_RS00250 PF00580 UvrD/REP helicase N-terminal domain SCD_RS00250 PF13361 UvrD-like helicase C-terminal domain SCD_RS00255 PF02597 ThiS family SCD_RS00260 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain SCD_RS00260 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain SCD_RS00265 PF00485 Phosphoribulokinase / Uridine kinase family SCD_RS00270 PF09334 tRNA synthetases class I (M) SCD_RS00270 PF13603 Leucyl-tRNA synthetase, Domain 2 SCD_RS00270 PF00133 tRNA synthetases class I (I, L, M and V) SCD_RS00270 PF08264 Anticodon-binding domain of tRNA SCD_RS00285 PF00171 Aldehyde dehydrogenase family SCD_RS00295 PF01467 Cytidylyltransferase-like SCD_RS00305 PF02590 Predicted SPOUT methyltransferase SCD_RS00310 PF02545 Maf-like protein SCD_RS00315 PF00575 S1 RNA binding domain SCD_RS00315 PF10150 Ribonuclease E/G family SCD_RS00325 PF08668 HDOD domain SCD_RS00325 PF00563 EAL domain SCD_RS00330 PF01850 PIN domain SCD_RS00345 PF02594 Uncharacterised ACR, YggU family COG1872 SCD_RS00350 PF02325 YGGT family SCD_RS00360 PF01168 Alanine racemase, N-terminal domain SCD_RS00365 PF00437 Type II/IV secretion system protein SCD_RS00370 PF00437 Type II/IV secretion system protein SCD_RS00375 PF00501 AMP-binding enzyme SCD_RS00380 PF03653 Uncharacterised protein family (UPF0093) SCD_RS00385 PF00578 AhpC/TSA family SCD_RS00400 PF02951 Prokaryotic glutathione synthetase, N-terminal domain SCD_RS00400 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain SCD_RS00405 PF02424 ApbE family SCD_RS00415 PF00381 PTS HPr component phosphorylation site SCD_RS00420 PF02896 PEP-utilising enzyme, TIM barrel domain SCD_RS00420 PF05524 PEP-utilising enzyme, N-terminal SCD_RS00420 PF00391 PEP-utilising enzyme, mobile domain SCD_RS00425 PF00561 alpha/beta hydrolase fold SCD_RS00440 PF07690 Major Facilitator Superfamily SCD_RS00450 PF03372 Endonuclease/Exonuclease/phosphatase family SCD_RS00455 PF00156 Phosphoribosyl transferase domain SCD_RS00465 PF02637 GatB domain SCD_RS00465 PF02934 GatB/GatE catalytic domain SCD_RS00470 PF01425 Amidase SCD_RS00475 PF02686 Glu-tRNAGln amidotransferase C subunit SCD_RS00495 PF03717 Penicillin-binding Protein dimerisation domain SCD_RS00495 PF00905 Penicillin binding protein transpeptidase domain SCD_RS00500 PF01098 Cell cycle protein SCD_RS00505 PF05036 Sporulation related domain SCD_RS00505 PF03330 Lytic transglycolase SCD_RS00510 PF00768 D-alanyl-D-alanine carboxypeptidase SCD_RS00510 PF07943 Penicillin-binding protein 5, C-terminal domain SCD_RS00515 PF01063 Amino-transferase class IV SCD_RS00520 PF04359 Protein of unknown function (DUF493) SCD_RS00525 PF03099 Biotin/lipoate A/B protein ligase family SCD_RS00530 PF04055 Radical SAM superfamily SCD_RS00530 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family SCD_RS00550 PF05593 RHS Repeat SCD_RS00590 PF00216 Bacterial DNA-binding protein SCD_RS00610 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SCD_RS00615 PF00899 ThiF family SCD_RS00690 PF00581 Rhodanese-like domain SCD_RS00695 PF00581 Rhodanese-like domain SCD_RS00695 PF00753 Metallo-beta-lactamase superfamily SCD_RS00705 PF00581 Rhodanese-like domain SCD_RS00705 PF01206 Sulfurtransferase TusA SCD_RS00715 PF01925 Sulfite exporter TauE/SafE SCD_RS00725 PF01053 Cys/Met metabolism PLP-dependent enzyme SCD_RS00730 PF13230 Glutamine amidotransferases class-II SCD_RS00735 PF00266 Aminotransferase class-V SCD_RS00745 PF09997 Predicted membrane protein (DUF2238) SCD_RS00765 PF01170 Putative RNA methylase family UPF0020 SCD_RS00765 PF02926 THUMP domain SCD_RS00770 PF01061 ABC-2 type transporter SCD_RS00775 PF00005 ABC transporter SCD_RS00790 PF01206 Sulfurtransferase TusA SCD_RS00800 PF17932 Tetracyclin repressor-like, C-terminal domain SCD_RS00800 PF00440 Bacterial regulatory proteins, tetR family SCD_RS00810 PF10518 TAT (twin-arginine translocation) pathway signal sequence SCD_RS00810 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding SCD_RS00810 PF07992 Pyridine nucleotide-disulphide oxidoreductase SCD_RS00815 PF03880 DbpA RNA binding domain SCD_RS00815 PF00270 DEAD/DEAH box helicase SCD_RS00815 PF00271 Helicase conserved C-terminal domain SCD_RS00845 PF04471 Restriction endonuclease SCD_RS00845 PF14338 Mrr N-terminal domain SCD_RS00850 PF01491 Frataxin-like domain SCD_RS00855 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SCD_RS00855 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SCD_RS00865 PF00440 Bacterial regulatory proteins, tetR family SCD_RS00865 PF16859 Tetracyclin repressor-like, C-terminal domain SCD_RS00870 PF13533 Biotin-lipoyl like SCD_RS00875 PF00873 AcrB/AcrD/AcrF family SCD_RS00885 PF00005 ABC transporter SCD_RS00895 PF01037 Lrp/AsnC ligand binding domain SCD_RS00900 PF00682 HMGL-like SCD_RS00900 PF08502 LeuA allosteric (dimerisation) domain SCD_RS00905 PF01384 Phosphate transporter family SCD_RS00920 PF04542 Sigma-70 region 2 SCD_RS00920 PF08281 Sigma-70, region 4 SCD_RS00935 PF03448 MgtE intracellular N domain SCD_RS00935 PF01769 Divalent cation transporter SCD_RS00935 PF00571 CBS domain SCD_RS00940 PF13426 PAS domain SCD_RS00940 PF08447 PAS fold SCD_RS00940 PF05231 MASE1 SCD_RS00940 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS00940 PF08448 PAS fold SCD_RS00940 PF00563 EAL domain SCD_RS00945 PF00912 Transglycosylase SCD_RS00950 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SCD_RS00950 PF01488 Shikimate / quinate 5-dehydrogenase SCD_RS00950 PF08501 Shikimate dehydrogenase substrate binding domain SCD_RS00955 PF16916 Dimerisation domain of Zinc Transporter SCD_RS00955 PF01545 Cation efflux family SCD_RS00960 PF03951 Glutamine synthetase, beta-Grasp domain SCD_RS00960 PF00120 Glutamine synthetase, catalytic domain SCD_RS00970 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS00970 PF00989 PAS fold SCD_RS00970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS00975 PF00158 Sigma-54 interaction domain SCD_RS00975 PF00072 Response regulator receiver domain SCD_RS00975 PF02954 Bacterial regulatory protein, Fis family SCD_RS00995 PF03372 Endonuclease/Exonuclease/phosphatase family SCD_RS01010 PF01432 Peptidase family M3 SCD_RS01015 PF00132 Bacterial transferase hexapeptide (six repeats) SCD_RS01020 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SCD_RS01020 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SCD_RS01020 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SCD_RS01020 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SCD_RS01035 PF01979 Amidohydrolase family SCD_RS01040 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SCD_RS01040 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SCD_RS01045 PF03652 Holliday junction resolvase SCD_RS01050 PF02622 Uncharacterized ACR, COG1678 SCD_RS01060 PF00575 S1 RNA binding domain SCD_RS01060 PF00773 RNB domain SCD_RS01060 PF08206 Ribonuclease B OB domain SCD_RS01060 PF17876 Cold shock domain SCD_RS01065 PF05728 Uncharacterised protein family (UPF0227) SCD_RS01070 PF08245 Mur ligase middle domain SCD_RS01070 PF02875 Mur ligase family, glutamate ligase domain SCD_RS01070 PF01225 Mur ligase family, catalytic domain SCD_RS01080 PF01263 Aldose 1-epimerase SCD_RS01090 PF00563 EAL domain SCD_RS01090 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS01090 PF03707 Bacterial signalling protein N terminal repeat SCD_RS01105 PF02310 B12 binding domain SCD_RS01105 PF02607 B12 binding domain SCD_RS01105 PF02965 Vitamin B12 dependent methionine synthase, activation domain SCD_RS01105 PF00809 Pterin binding enzyme SCD_RS01105 PF02574 Homocysteine S-methyltransferase SCD_RS01115 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS01135 PF00437 Type II/IV secretion system protein SCD_RS01140 PF01078 Magnesium chelatase, subunit ChlI SCD_RS01140 PF13335 Magnesium chelatase, subunit ChlI C-terminal SCD_RS01190 PF04055 Radical SAM superfamily SCD_RS01190 PF00919 Uncharacterized protein family UPF0004 SCD_RS01190 PF01938 TRAM domain SCD_RS01195 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SCD_RS01195 PF14579 Helix-hairpin-helix motif SCD_RS01195 PF14480 DNA polymerase III polC-type N-terminus I SCD_RS01195 PF07733 Bacterial DNA polymerase III alpha NTPase domain SCD_RS01195 PF11490 DNA polymerase III polC-type N-terminus II SCD_RS01195 PF02811 PHP domain SCD_RS01195 PF00929 Exonuclease SCD_RS01195 PF01336 OB-fold nucleic acid binding domain SCD_RS01315 PF01078 Magnesium chelatase, subunit ChlI SCD_RS01315 PF13335 Magnesium chelatase, subunit ChlI C-terminal SCD_RS01320 PF04380 Membrane fusogenic activity SCD_RS01330 PF00543 Nitrogen regulatory protein P-II SCD_RS01360 PF00924 Mechanosensitive ion channel SCD_RS01375 PF09335 SNARE associated Golgi protein SCD_RS01380 PF02913 FAD linked oxidases, C-terminal domain SCD_RS01380 PF01565 FAD binding domain SCD_RS01395 PF00989 PAS fold SCD_RS01395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS01395 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS01395 PF11808 Phosphate regulon sensor protein PhoR SCD_RS01400 PF00072 Response regulator receiver domain SCD_RS01400 PF00486 Transcriptional regulatory protein, C terminal SCD_RS01405 PF01209 ubiE/COQ5 methyltransferase family SCD_RS01420 PF03109 ABC1 family SCD_RS01435 PF01381 Helix-turn-helix SCD_RS01475 PF00873 AcrB/AcrD/AcrF family SCD_RS01480 PF13533 Biotin-lipoyl like SCD_RS01485 PF00343 Carbohydrate phosphorylase SCD_RS01500 PF03239 Iron permease FTR1 family SCD_RS01505 PF13473 Cupredoxin-like domain SCD_RS01520 PF02773 S-adenosylmethionine synthetase, C-terminal domain SCD_RS01520 PF02772 S-adenosylmethionine synthetase, central domain SCD_RS01520 PF00438 S-adenosylmethionine synthetase, N-terminal domain SCD_RS01525 PF03279 Bacterial lipid A biosynthesis acyltransferase SCD_RS01540 PF01678 Diaminopimelate epimerase SCD_RS01550 PF02899 Phage integrase, N-terminal SAM-like domain SCD_RS01550 PF00589 Phage integrase family SCD_RS01580 PF00227 Proteasome subunit SCD_RS01585 PF07724 AAA domain (Cdc48 subfamily) SCD_RS01585 PF00004 ATPase family associated with various cellular activities (AAA) SCD_RS01585 PF10431 C-terminal, D2-small domain, of ClpB protein SCD_RS01600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SCD_RS01600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SCD_RS01605 PF02595 Glycerate kinase family SCD_RS01615 PF00005 ABC transporter SCD_RS01615 PF12848 ABC transporter SCD_RS01630 PF00696 Amino acid kinase family SCD_RS01640 PF02600 Disulfide bond formation protein DsbB SCD_RS01650 PF00034 Cytochrome c SCD_RS01660 PF07730 Histidine kinase SCD_RS01665 PF00196 Bacterial regulatory proteins, luxR family SCD_RS01665 PF00072 Response regulator receiver domain SCD_RS01670 PF00155 Aminotransferase class I and II SCD_RS01680 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SCD_RS01680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SCD_RS01690 PF00196 Bacterial regulatory proteins, luxR family SCD_RS01690 PF00072 Response regulator receiver domain SCD_RS01705 PF00378 Enoyl-CoA hydratase/isomerase SCD_RS01710 PF01040 UbiA prenyltransferase family SCD_RS01715 PF00578 AhpC/TSA family SCD_RS01720 PF13378 Enolase C-terminal domain-like SCD_RS01725 PF18793 Nitrous oxide reductase propeller repeat 2 SCD_RS01725 PF18764 Nitrous oxide reductase propeller repeat SCD_RS01725 PF13473 Cupredoxin-like domain SCD_RS01735 PF00034 Cytochrome c SCD_RS01745 PF05048 Periplasmic copper-binding protein (NosD) SCD_RS01750 PF12838 4Fe-4S dicluster domain SCD_RS01750 PF12800 4Fe-4S binding domain SCD_RS01755 PF12801 4Fe-4S binding domain SCD_RS01755 PF04205 FMN-binding domain SCD_RS01760 PF00005 ABC transporter SCD_RS01775 PF01209 ubiE/COQ5 methyltransferase family SCD_RS01780 PF13193 AMP-binding enzyme C-terminal domain SCD_RS01780 PF00501 AMP-binding enzyme SCD_RS01790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SCD_RS01790 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SCD_RS01795 PF00037 4Fe-4S binding domain SCD_RS01795 PF12801 4Fe-4S binding domain SCD_RS01800 PF12838 4Fe-4S dicluster domain SCD_RS01800 PF12800 4Fe-4S binding domain SCD_RS01810 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SCD_RS01820 PF03264 NapC/NirT cytochrome c family, N-terminal region SCD_RS01825 PF09459 Ethylbenzene dehydrogenase SCD_RS01830 PF00127 Copper binding proteins, plastocyanin/azurin family SCD_RS01835 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SCD_RS01845 PF17805 AsnC-like ligand binding domain SCD_RS01845 PF13404 AsnC-type helix-turn-helix domain SCD_RS01850 PF17805 AsnC-like ligand binding domain SCD_RS01850 PF13404 AsnC-type helix-turn-helix domain SCD_RS01855 PF17805 AsnC-like ligand binding domain SCD_RS01860 PF13186 Iron-sulfur cluster-binding domain SCD_RS01860 PF04055 Radical SAM superfamily SCD_RS01880 PF00384 Molybdopterin oxidoreductase SCD_RS01880 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SCD_RS01880 PF01568 Molydopterin dinucleotide binding domain SCD_RS01885 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) SCD_RS01890 PF00034 Cytochrome c SCD_RS01895 PF07992 Pyridine nucleotide-disulphide oxidoreductase SCD_RS01895 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding SCD_RS01895 PF10518 TAT (twin-arginine translocation) pathway signal sequence SCD_RS01910 PF13597 Anaerobic ribonucleoside-triphosphate reductase SCD_RS01910 PF03477 ATP cone domain SCD_RS01915 PF02036 SCP-2 sterol transfer family SCD_RS01930 PF02541 Ppx/GppA phosphatase family SCD_RS01935 PF01895 PhoU domain SCD_RS01940 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SCD_RS01950 PF00585 C-terminal regulatory domain of Threonine dehydratase SCD_RS01950 PF00291 Pyridoxal-phosphate dependent enzyme SCD_RS01960 PF00171 Aldehyde dehydrogenase family SCD_RS01965 PF14718 Soluble lytic murein transglycosylase L domain SCD_RS01965 PF01464 Transglycosylase SLT domain SCD_RS01970 PF11066 Protein of unknown function (DUF2867) SCD_RS01970 PF13460 NAD(P)H-binding SCD_RS01975 PF01743 Poly A polymerase head domain SCD_RS01975 PF12627 Probable RNA and SrmB- binding site of polymerase A SCD_RS01975 PF01966 HD domain SCD_RS01980 PF00291 Pyridoxal-phosphate dependent enzyme SCD_RS01985 PF00563 EAL domain SCD_RS01985 PF08448 PAS fold SCD_RS01985 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS02010 PF00072 Response regulator receiver domain SCD_RS02010 PF00486 Transcriptional regulatory protein, C terminal SCD_RS02020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SCD_RS02025 PF12704 MacB-like periplasmic core domain SCD_RS02025 PF00005 ABC transporter SCD_RS02025 PF02687 FtsX-like permease family SCD_RS02030 PF12704 MacB-like periplasmic core domain SCD_RS02030 PF00005 ABC transporter SCD_RS02030 PF02687 FtsX-like permease family SCD_RS02035 PF02687 FtsX-like permease family SCD_RS02035 PF00005 ABC transporter SCD_RS02035 PF12704 MacB-like periplasmic core domain SCD_RS02050 PF01171 PP-loop family SCD_RS02070 PF00563 EAL domain SCD_RS02070 PF08448 PAS fold SCD_RS02070 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS02080 PF00072 Response regulator receiver domain SCD_RS02095 PF02219 Methylenetetrahydrofolate reductase SCD_RS02105 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SCD_RS02105 PF05221 S-adenosyl-L-homocysteine hydrolase SCD_RS02120 PF03099 Biotin/lipoate A/B protein ligase family SCD_RS02120 PF10437 Bacterial lipoate protein ligase C-terminus SCD_RS02130 PF05872 Bacterial protein of unknown function (DUF853) SCD_RS02135 PF03707 Bacterial signalling protein N terminal repeat SCD_RS02135 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS02135 PF00563 EAL domain SCD_RS02140 PF01136 Peptidase family U32 SCD_RS02145 PF01136 Peptidase family U32 SCD_RS02150 PF04055 Radical SAM superfamily SCD_RS02150 PF16199 Radical_SAM C-terminal domain SCD_RS02160 PF00069 Protein kinase domain SCD_RS02160 PF03793 PASTA domain SCD_RS02165 PF03793 PASTA domain SCD_RS02165 PF00069 Protein kinase domain SCD_RS02195 PF04102 SlyX SCD_RS02200 PF02082 Transcriptional regulator SCD_RS02205 PF00092 von Willebrand factor type A domain SCD_RS02230 PF01883 Iron-sulfur cluster assembly protein SCD_RS02235 PF02954 Bacterial regulatory protein, Fis family SCD_RS02235 PF00072 Response regulator receiver domain SCD_RS02235 PF00158 Sigma-54 interaction domain SCD_RS02255 PF07728 AAA domain (dynein-related subfamily) SCD_RS02255 PF08406 CbbQ/NirQ/NorQ C-terminal SCD_RS02265 PF00510 Cytochrome c oxidase subunit III SCD_RS02270 PF00115 Cytochrome C and Quinol oxidase polypeptide I SCD_RS02275 PF00034 Cytochrome c SCD_RS02315 PF17827 PrmC N-terminal domain SCD_RS02315 PF05175 Methyltransferase small domain SCD_RS02320 PF03462 PCRF domain SCD_RS02320 PF00472 RF-1 domain SCD_RS02325 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SCD_RS02325 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SCD_RS02325 PF01488 Shikimate / quinate 5-dehydrogenase SCD_RS02340 PF08521 Two-component sensor kinase N-terminal SCD_RS02340 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS02340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS02345 PF00486 Transcriptional regulatory protein, C terminal SCD_RS02345 PF00072 Response regulator receiver domain SCD_RS02350 PF09086 Domain of unknown function (DUF1924) SCD_RS02380 PF00474 Sodium:solute symporter family SCD_RS02390 PF00571 CBS domain SCD_RS02390 PF00478 IMP dehydrogenase / GMP reductase domain SCD_RS02395 PF07556 Protein of unknown function (DUF1538) SCD_RS02425 PF00118 TCP-1/cpn60 chaperonin family SCD_RS02430 PF00166 Chaperonin 10 Kd subunit SCD_RS02440 PF00924 Mechanosensitive ion channel SCD_RS02450 PF13406 Transglycosylase SLT domain SCD_RS02460 PF00202 Aminotransferase class-III SCD_RS02465 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family SCD_RS02470 PF02623 FliW protein SCD_RS02475 PF00156 Phosphoribosyl transferase domain SCD_RS02485 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SCD_RS02510 PF01040 UbiA prenyltransferase family SCD_RS02515 PF04345 Chorismate lyase SCD_RS02520 PF17191 RecG wedge domain SCD_RS02520 PF00271 Helicase conserved C-terminal domain SCD_RS02520 PF00270 DEAD/DEAH box helicase SCD_RS02530 PF01042 Endoribonuclease L-PSP SCD_RS02535 PF04607 Region found in RelA / SpoT proteins SCD_RS02535 PF02824 TGS domain SCD_RS02535 PF13291 ACT domain SCD_RS02540 PF01192 RNA polymerase Rpb6 SCD_RS02545 PF00625 Guanylate kinase SCD_RS02550 PF03755 YicC-like family, N-terminal region SCD_RS02550 PF08340 Domain of unknown function (DUF1732) SCD_RS02555 PF00069 Protein kinase domain SCD_RS02565 PF01138 3' exoribonuclease family, domain 1 SCD_RS02565 PF03725 3' exoribonuclease family, domain 2 SCD_RS02570 PF01725 Ham1 family SCD_RS02575 PF06969 HemN C-terminal domain SCD_RS02575 PF04055 Radical SAM superfamily SCD_RS02580 PF01008 Initiation factor 2 subunit family SCD_RS02590 PF01227 GTP cyclohydrolase I SCD_RS02605 PF16925 Tetracyclin repressor-like, C-terminal domain SCD_RS02605 PF00440 Bacterial regulatory proteins, tetR family SCD_RS02620 PF01206 Sulfurtransferase TusA SCD_RS02625 PF00881 Nitroreductase family SCD_RS02630 PF02390 Putative methyltransferase SCD_RS02635 PF05690 Thiazole biosynthesis protein ThiG SCD_RS02640 PF02597 ThiS family SCD_RS02640 PF05690 Thiazole biosynthesis protein ThiG SCD_RS02645 PF07238 PilZ domain SCD_RS02645 PF07317 Flagellar regulator YcgR SCD_RS02660 PF00633 Helix-hairpin-helix motif SCD_RS02660 PF14815 NUDIX domain SCD_RS02660 PF10576 Iron-sulfur binding domain of endonuclease III SCD_RS02660 PF00730 HhH-GPD superfamily base excision DNA repair protein SCD_RS02665 PF00689 Cation transporting ATPase, C-terminus SCD_RS02665 PF00690 Cation transporter/ATPase, N-terminus SCD_RS02670 PF01026 TatD related DNase SCD_RS02675 PF01545 Cation efflux family SCD_RS02675 PF16916 Dimerisation domain of Zinc Transporter SCD_RS02680 PF00899 ThiF family SCD_RS02725 PF02441 Flavoprotein SCD_RS02745 PF03668 P-loop ATPase protein family SCD_RS02750 PF02603 HPr Serine kinase N terminus SCD_RS02750 PF07475 HPr Serine kinase C-terminal domain SCD_RS02755 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SCD_RS02760 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SCD_RS02770 PF00005 ABC transporter SCD_RS02775 PF03968 OstA-like protein SCD_RS02790 PF00571 CBS domain SCD_RS02790 PF01380 SIS domain SCD_RS02795 PF02254 TrkA-N domain SCD_RS02795 PF02080 TrkA-C domain SCD_RS02795 PF00999 Sodium/hydrogen exchanger family SCD_RS02800 PF08334 Type II secretion system (T2SS), protein G SCD_RS02800 PF07963 Prokaryotic N-terminal methylation motif SCD_RS02830 PF00482 Type II secretion system (T2SS), protein F SCD_RS02835 PF00437 Type II/IV secretion system protein SCD_RS02835 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SCD_RS02845 PF00263 Bacterial type II and III secretion system protein SCD_RS02845 PF03958 Bacterial type II/III secretion system short domain SCD_RS02850 PF01471 Putative peptidoglycan binding domain SCD_RS02850 PF13401 AAA domain SCD_RS02855 PF00005 ABC transporter SCD_RS02860 PF02405 Permease MlaE SCD_RS02865 PF02470 MlaD protein SCD_RS02880 PF00005 ABC transporter SCD_RS02885 PF01061 ABC-2 type transporter SCD_RS02890 PF01722 BolA-like protein SCD_RS02895 PF00462 Glutaredoxin SCD_RS02900 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SCD_RS02905 PF01634 ATP phosphoribosyltransferase SCD_RS02910 PF00815 Histidinol dehydrogenase SCD_RS02915 PF00155 Aminotransferase class I and II SCD_RS02920 PF00475 Imidazoleglycerol-phosphate dehydratase SCD_RS02925 PF00117 Glutamine amidotransferase class-I SCD_RS02930 PF00977 Histidine biosynthesis protein SCD_RS02935 PF00977 Histidine biosynthesis protein SCD_RS02940 PF01502 Phosphoribosyl-AMP cyclohydrolase SCD_RS02945 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SCD_RS02955 PF02416 mttA/Hcf106 family SCD_RS02960 PF02416 mttA/Hcf106 family SCD_RS02965 PF00902 Sec-independent protein translocase protein (TatC) SCD_RS02970 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS02970 PF00072 Response regulator receiver domain SCD_RS02975 PF17820 PDZ domain SCD_RS02975 PF13180 PDZ domain SCD_RS02980 PF01784 NIF3 (NGG1p interacting factor 3) SCD_RS02985 PF00355 Rieske [2Fe-2S] domain SCD_RS02985 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal SCD_RS02990 PF00032 Cytochrome b(C-terminal)/b6/petD SCD_RS02990 PF00033 Cytochrome b/b6/petB SCD_RS02995 PF02167 Cytochrome C1 family SCD_RS03000 PF02798 Glutathione S-transferase, N-terminal domain SCD_RS03000 PF00043 Glutathione S-transferase, C-terminal domain SCD_RS03005 PF04386 Stringent starvation protein B SCD_RS03030 PF03144 Elongation factor Tu domain 2 SCD_RS03030 PF03143 Elongation factor Tu C-terminal domain SCD_RS03030 PF00009 Elongation factor Tu GTP binding domain SCD_RS03040 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SCD_RS03045 PF00467 KOW motif SCD_RS03045 PF02357 Transcription termination factor nusG SCD_RS03050 PF03946 Ribosomal protein L11, N-terminal domain SCD_RS03050 PF00298 Ribosomal protein L11, RNA binding domain SCD_RS03055 PF00687 Ribosomal protein L1p/L10e family SCD_RS03060 PF00466 Ribosomal protein L10 SCD_RS03065 PF00542 Ribosomal protein L7/L12 C-terminal domain SCD_RS03065 PF16320 Ribosomal protein L7/L12 dimerisation domain SCD_RS03070 PF04561 RNA polymerase Rpb2, domain 2 SCD_RS03070 PF10385 RNA polymerase beta subunit external 1 domain SCD_RS03070 PF04565 RNA polymerase Rpb2, domain 3 SCD_RS03070 PF00562 RNA polymerase Rpb2, domain 6 SCD_RS03070 PF04560 RNA polymerase Rpb2, domain 7 SCD_RS03070 PF04563 RNA polymerase beta subunit SCD_RS03075 PF04983 RNA polymerase Rpb1, domain 3 SCD_RS03075 PF04997 RNA polymerase Rpb1, domain 1 SCD_RS03075 PF00623 RNA polymerase Rpb1, domain 2 SCD_RS03075 PF05000 RNA polymerase Rpb1, domain 4 SCD_RS03075 PF04998 RNA polymerase Rpb1, domain 5 SCD_RS03080 PF00164 Ribosomal protein S12/S23 SCD_RS03085 PF00177 Ribosomal protein S7p/S5e SCD_RS03090 PF14492 Elongation Factor G, domain II SCD_RS03090 PF00679 Elongation factor G C-terminus SCD_RS03090 PF03764 Elongation factor G, domain IV SCD_RS03090 PF00009 Elongation factor Tu GTP binding domain SCD_RS03090 PF03144 Elongation factor Tu domain 2 SCD_RS03095 PF03143 Elongation factor Tu C-terminal domain SCD_RS03095 PF03144 Elongation factor Tu domain 2 SCD_RS03095 PF00009 Elongation factor Tu GTP binding domain SCD_RS03100 PF00338 Ribosomal protein S10p/S20e SCD_RS03105 PF00297 Ribosomal protein L3 SCD_RS03110 PF00573 Ribosomal protein L4/L1 family SCD_RS03115 PF00276 Ribosomal protein L23 SCD_RS03120 PF00181 Ribosomal Proteins L2, RNA binding domain SCD_RS03120 PF03947 Ribosomal Proteins L2, C-terminal domain SCD_RS03125 PF00203 Ribosomal protein S19 SCD_RS03130 PF00237 Ribosomal protein L22p/L17e SCD_RS03135 PF07650 KH domain SCD_RS03135 PF00189 Ribosomal protein S3, C-terminal domain SCD_RS03140 PF00252 Ribosomal protein L16p/L10e SCD_RS03145 PF00831 Ribosomal L29 protein SCD_RS03150 PF00366 Ribosomal protein S17 SCD_RS03155 PF00238 Ribosomal protein L14p/L23e SCD_RS03160 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SCD_RS03160 PF00467 KOW motif SCD_RS03165 PF00281 Ribosomal protein L5 SCD_RS03165 PF00673 ribosomal L5P family C-terminus SCD_RS03170 PF00253 Ribosomal protein S14p/S29e SCD_RS03175 PF00410 Ribosomal protein S8 SCD_RS03180 PF00347 Ribosomal protein L6 SCD_RS03185 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SCD_RS03190 PF03719 Ribosomal protein S5, C-terminal domain SCD_RS03190 PF00333 Ribosomal protein S5, N-terminal domain SCD_RS03195 PF00327 Ribosomal protein L30p/L7e SCD_RS03200 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SCD_RS03205 PF00344 SecY translocase SCD_RS03210 PF01176 Translation initiation factor 1A / IF-1 SCD_RS03215 PF00416 Ribosomal protein S13/S18 SCD_RS03220 PF00411 Ribosomal protein S11 SCD_RS03225 PF01479 S4 domain SCD_RS03225 PF00163 Ribosomal protein S4/S9 N-terminal domain SCD_RS03230 PF01000 RNA polymerase Rpb3/RpoA insert domain SCD_RS03230 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SCD_RS03230 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SCD_RS03235 PF01196 Ribosomal protein L17 SCD_RS03240 PF17755 UvrA DNA-binding domain SCD_RS03240 PF17760 UvrA interaction domain SCD_RS03245 PF07690 Major Facilitator Superfamily SCD_RS03250 PF00436 Single-strand binding protein family SCD_RS03260 PF01926 50S ribosome-binding GTPase SCD_RS03265 PF03960 ArsC family SCD_RS03300 PF02938 GAD domain SCD_RS03300 PF01336 OB-fold nucleic acid binding domain SCD_RS03300 PF00152 tRNA synthetases class II (D, K and N) SCD_RS03305 PF00293 NUDIX domain SCD_RS03310 PF02445 Quinolinate synthetase A protein SCD_RS03315 PF03372 Endonuclease/Exonuclease/phosphatase family SCD_RS03320 PF13091 PLD-like domain SCD_RS03325 PF01709 Transcriptional regulator SCD_RS03330 PF02075 Crossover junction endodeoxyribonuclease RuvC SCD_RS03335 PF01330 RuvA N terminal domain SCD_RS03335 PF07499 RuvA, C-terminal domain SCD_RS03340 PF17864 RuvB AAA lid domain SCD_RS03340 PF05491 RuvB C-terminal winged helix domain SCD_RS03340 PF05496 Holliday junction DNA helicase RuvB P-loop domain SCD_RS03345 PF03061 Thioesterase superfamily SCD_RS03350 PF01618 MotA/TolQ/ExbB proton channel family SCD_RS03355 PF02472 Biopolymer transport protein ExbD/TolR SCD_RS03365 PF07676 WD40-like Beta Propeller Repeat SCD_RS03365 PF04052 TolB amino-terminal domain SCD_RS03370 PF00691 OmpA family SCD_RS03380 PF04055 Radical SAM superfamily SCD_RS03385 PF02875 Mur ligase family, glutamate ligase domain SCD_RS03385 PF08245 Mur ligase middle domain SCD_RS03385 PF08443 RimK-like ATP-grasp domain SCD_RS03390 PF02875 Mur ligase family, glutamate ligase domain SCD_RS03390 PF08443 RimK-like ATP-grasp domain SCD_RS03390 PF08245 Mur ligase middle domain SCD_RS03400 PF00664 ABC transporter transmembrane region SCD_RS03400 PF00005 ABC transporter SCD_RS03410 PF03707 Bacterial signalling protein N terminal repeat SCD_RS03410 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS03410 PF00563 EAL domain SCD_RS03420 PF00849 RNA pseudouridylate synthase SCD_RS03425 PF00180 Isocitrate/isopropylmalate dehydrogenase SCD_RS03435 PF00768 D-alanyl-D-alanine carboxypeptidase SCD_RS03440 PF12804 MobA-like NTP transferase domain SCD_RS03445 PF00231 ATP synthase SCD_RS03450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SCD_RS03450 PF00306 ATP synthase alpha/beta chain, C terminal domain SCD_RS03450 PF02874 ATP synthase alpha/beta family, beta-barrel domain SCD_RS03455 PF11154 Protein of unknown function (DUF2934) SCD_RS03455 PF00430 ATP synthase B/B' CF(0) SCD_RS03460 PF00137 ATP synthase subunit C SCD_RS03465 PF00119 ATP synthase A chain SCD_RS03485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SCD_RS03485 PF02874 ATP synthase alpha/beta family, beta-barrel domain SCD_RS03495 PF03976 Polyphosphate kinase 2 (PPK2) SCD_RS03500 PF00999 Sodium/hydrogen exchanger family SCD_RS03505 PF09364 XFP N-terminal domain SCD_RS03505 PF09363 XFP C-terminal domain SCD_RS03505 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase SCD_RS03510 PF00871 Acetokinase family SCD_RS03515 PF00343 Carbohydrate phosphorylase SCD_RS03515 PF11897 Protein of unknown function (DUF3417) SCD_RS03530 PF01066 CDP-alcohol phosphatidyltransferase SCD_RS03540 PF00923 Transaldolase/Fructose-6-phosphate aldolase SCD_RS03545 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SCD_RS03545 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SCD_RS03560 PF05433 Glycine zipper 2TM domain SCD_RS03565 PF09905 DNA-binding protein VF530 SCD_RS03570 PF03471 Transporter associated domain SCD_RS03570 PF00999 Sodium/hydrogen exchanger family SCD_RS03570 PF02080 TrkA-C domain SCD_RS03575 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS03575 PF00072 Response regulator receiver domain SCD_RS03580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS03580 PF00497 Bacterial extracellular solute-binding proteins, family 3 SCD_RS03580 PF00072 Response regulator receiver domain SCD_RS03580 PF00989 PAS fold SCD_RS03580 PF01627 Hpt domain SCD_RS03580 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS03590 PF01594 AI-2E family transporter SCD_RS03595 PF04972 BON domain SCD_RS03600 PF00691 OmpA family SCD_RS03645 PF01197 Ribosomal protein L31 SCD_RS03650 PF07497 Rho termination factor, RNA-binding domain SCD_RS03650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SCD_RS03650 PF07498 Rho termination factor, N-terminal domain SCD_RS03655 PF00085 Thioredoxin SCD_RS03665 PF13361 UvrD-like helicase C-terminal domain SCD_RS03665 PF00580 UvrD/REP helicase N-terminal domain SCD_RS03665 PF12705 PD-(D/E)XK nuclease superfamily SCD_RS03715 PF00692 dUTPase SCD_RS03720 PF02441 Flavoprotein SCD_RS03720 PF04127 DNA / pantothenate metabolism flavoprotein SCD_RS03725 PF04002 RadC-like JAB domain SCD_RS03730 PF00830 Ribosomal L28 family SCD_RS03735 PF00471 Ribosomal protein L33 SCD_RS03740 PF00924 Mechanosensitive ion channel SCD_RS03740 PF12795 Mechanosensitive ion channel porin domain SCD_RS03740 PF12794 Mechanosensitive ion channel inner membrane domain 1 SCD_RS03745 PF01544 CorA-like Mg2+ transporter protein SCD_RS03750 PF01402 Ribbon-helix-helix protein, copG family SCD_RS03750 PF08753 NikR C terminal nickel binding domain SCD_RS03755 PF00005 ABC transporter SCD_RS03765 PF01891 Cobalt uptake substrate-specific transmembrane region SCD_RS03765 PF13190 PDGLE domain SCD_RS03780 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SCD_RS03780 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal SCD_RS03785 PF13247 4Fe-4S dicluster domain SCD_RS03790 PF03916 Polysulphide reductase, NrfD SCD_RS03795 PF00374 Nickel-dependent hydrogenase SCD_RS03800 PF01750 Hydrogenase maturation protease SCD_RS03805 PF01455 HupF/HypC family SCD_RS03815 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SCD_RS03820 PF02492 CobW/HypB/UreG, nucleotide-binding domain SCD_RS03825 PF07503 HypF finger SCD_RS03825 PF01300 Telomere recombination SCD_RS03825 PF17788 HypF Kae1-like domain SCD_RS03825 PF00708 Acylphosphatase SCD_RS03830 PF01455 HupF/HypC family SCD_RS03835 PF01924 Hydrogenase formation hypA family SCD_RS03840 PF00586 AIR synthase related protein, N-terminal domain SCD_RS03840 PF02769 AIR synthase related protein, C-terminal domain SCD_RS03860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS03860 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS03860 PF00989 PAS fold SCD_RS03860 PF13426 PAS domain SCD_RS03860 PF13188 PAS domain SCD_RS03865 PF03707 Bacterial signalling protein N terminal repeat SCD_RS03865 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS03865 PF00563 EAL domain SCD_RS03885 PF06508 Queuosine biosynthesis protein QueC SCD_RS03905 PF00043 Glutathione S-transferase, C-terminal domain SCD_RS03905 PF13417 Glutathione S-transferase, N-terminal domain SCD_RS03910 PF00330 Aconitase family (aconitate hydratase) SCD_RS03910 PF06434 Aconitate hydratase 2 N-terminus SCD_RS03910 PF11791 Aconitate B N-terminal domain SCD_RS03915 PF07992 Pyridine nucleotide-disulphide oxidoreductase SCD_RS03925 PF07992 Pyridine nucleotide-disulphide oxidoreductase SCD_RS03935 PF00158 Sigma-54 interaction domain SCD_RS03935 PF00072 Response regulator receiver domain SCD_RS03935 PF02954 Bacterial regulatory protein, Fis family SCD_RS03945 PF10431 C-terminal, D2-small domain, of ClpB protein SCD_RS03945 PF02861 Clp amino terminal domain, pathogenicity island component SCD_RS03945 PF07724 AAA domain (Cdc48 subfamily) SCD_RS03945 PF00004 ATPase family associated with various cellular activities (AAA) SCD_RS03945 PF17871 AAA lid domain SCD_RS03950 PF02617 ATP-dependent Clp protease adaptor protein ClpS SCD_RS03955 PF01435 Peptidase family M48 SCD_RS03955 PF13181 Tetratricopeptide repeat SCD_RS03960 PF01967 MoaC family SCD_RS03965 PF00581 Rhodanese-like domain SCD_RS03970 PF01206 Sulfurtransferase TusA SCD_RS03975 PF13686 DsrE/DsrF/DrsH-like family SCD_RS03980 PF01597 Glycine cleavage H-protein SCD_RS03990 PF10437 Bacterial lipoate protein ligase C-terminus SCD_RS03990 PF03099 Biotin/lipoate A/B protein ligase family SCD_RS04015 PF08264 Anticodon-binding domain of tRNA SCD_RS04015 PF10458 Valyl tRNA synthetase tRNA binding arm SCD_RS04015 PF00133 tRNA synthetases class I (I, L, M and V) SCD_RS04030 PF00883 Cytosol aminopeptidase family, catalytic domain SCD_RS04030 PF02789 Cytosol aminopeptidase family, N-terminal domain SCD_RS04035 PF03739 Lipopolysaccharide export system permease LptF/LptG SCD_RS04065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SCD_RS04065 PF00205 Thiamine pyrophosphate enzyme, central domain SCD_RS04065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SCD_RS04070 PF10369 Small subunit of acetolactate synthase SCD_RS04075 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SCD_RS04075 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SCD_RS04080 PF02666 Phosphatidylserine decarboxylase SCD_RS04085 PF01066 CDP-alcohol phosphatidyltransferase SCD_RS04090 PF08502 LeuA allosteric (dimerisation) domain SCD_RS04090 PF00682 HMGL-like SCD_RS04110 PF03631 Virulence factor BrkB SCD_RS04120 PF08534 Redoxin SCD_RS04140 PF01814 Hemerythrin HHE cation binding domain SCD_RS04145 PF00994 Probable molybdopterin binding domain SCD_RS04150 PF04751 Protein of unknown function (DUF615) SCD_RS04155 PF01523 Putative modulator of DNA gyrase SCD_RS04160 PF00464 Serine hydroxymethyltransferase SCD_RS04165 PF03477 ATP cone domain SCD_RS04170 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SCD_RS04170 PF01872 RibD C-terminal domain SCD_RS04175 PF00677 Lumazine binding domain SCD_RS04180 PF00925 GTP cyclohydrolase II SCD_RS04180 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SCD_RS04185 PF00885 6,7-dimethyl-8-ribityllumazine synthase SCD_RS04190 PF01029 NusB family SCD_RS04200 PF04608 Phosphatidylglycerophosphatase A SCD_RS04205 PF02464 Competence-damaged protein SCD_RS04210 PF00154 recA bacterial DNA recombination protein SCD_RS04215 PF02631 RecX family SCD_RS04225 PF01411 tRNA synthetases class II (A) SCD_RS04225 PF02272 DHHA1 domain SCD_RS04225 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SCD_RS04230 PF08668 HDOD domain SCD_RS04230 PF00563 EAL domain SCD_RS04235 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SCD_RS04235 PF07992 Pyridine nucleotide-disulphide oxidoreductase SCD_RS04240 PF00364 Biotin-requiring enzyme SCD_RS04240 PF02817 e3 binding domain SCD_RS04240 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SCD_RS04245 PF17831 Pyruvate dehydrogenase E1 component middle domain SCD_RS04245 PF00456 Transketolase, thiamine diphosphate binding domain SCD_RS04250 PF00883 Cytosol aminopeptidase family, catalytic domain SCD_RS04250 PF02789 Cytosol aminopeptidase family, N-terminal domain SCD_RS04270 PF08240 Alcohol dehydrogenase GroES-like domain SCD_RS04270 PF00107 Zinc-binding dehydrogenase SCD_RS04275 PF00689 Cation transporting ATPase, C-terminus SCD_RS04275 PF00690 Cation transporter/ATPase, N-terminus SCD_RS04280 PF01264 Chorismate synthase SCD_RS04295 PF14743 DNA ligase OB-like domain SCD_RS04295 PF01068 ATP dependent DNA ligase domain SCD_RS04315 PF00072 Response regulator receiver domain SCD_RS04315 PF00486 Transcriptional regulatory protein, C terminal SCD_RS04320 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS04320 PF08521 Two-component sensor kinase N-terminal SCD_RS04320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS04340 PF00330 Aconitase family (aconitate hydratase) SCD_RS04345 PF00694 Aconitase C-terminal domain SCD_RS04350 PF00180 Isocitrate/isopropylmalate dehydrogenase SCD_RS04355 PF02774 Semialdehyde dehydrogenase, dimerisation domain SCD_RS04355 PF01118 Semialdehyde dehydrogenase, NAD binding domain SCD_RS04370 PF01416 tRNA pseudouridine synthase SCD_RS04375 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SCD_RS04380 PF00291 Pyridoxal-phosphate dependent enzyme SCD_RS04395 PF00290 Tryptophan synthase alpha chain SCD_RS04400 PF17848 Acetyl-coA carboxylase zinc finger domain SCD_RS04400 PF01039 Carboxyl transferase domain SCD_RS04405 PF08245 Mur ligase middle domain SCD_RS04405 PF02875 Mur ligase family, glutamate ligase domain SCD_RS04415 PF02674 Colicin V production protein SCD_RS04420 PF00156 Phosphoribosyl transferase domain SCD_RS04425 PF01053 Cys/Met metabolism PLP-dependent enzyme SCD_RS04435 PF18152 DAHP synthase ferredoxin-like domain SCD_RS04435 PF00793 DAHP synthetase I family SCD_RS04440 PF00149 Calcineurin-like phosphoesterase SCD_RS04445 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SCD_RS04450 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SCD_RS04460 PF13181 Tetratricopeptide repeat SCD_RS04460 PF07719 Tetratricopeptide repeat SCD_RS04465 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain SCD_RS04465 PF00749 tRNA synthetases class I (E and Q), catalytic domain SCD_RS04470 PF09190 DALR domain SCD_RS04470 PF01406 tRNA synthetases class I (C) catalytic domain SCD_RS04480 PF00684 DnaJ central domain SCD_RS04480 PF00226 DnaJ domain SCD_RS04480 PF01556 DnaJ C terminal domain SCD_RS04485 PF00012 Hsp70 protein SCD_RS04490 PF01025 GrpE SCD_RS04510 PF00762 Ferrochelatase SCD_RS04515 PF01628 HrcA protein C terminal domain SCD_RS04515 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding SCD_RS04520 PF01513 ATP-NAD kinase SCD_RS04535 PF02463 RecF/RecN/SMC N terminal domain SCD_RS04545 PF00510 Cytochrome c oxidase subunit III SCD_RS04550 PF01475 Ferric uptake regulator family SCD_RS04555 PF04355 SmpA / OmlA family SCD_RS04560 PF05173 Dihydrodipicolinate reductase, C-terminus SCD_RS04560 PF01113 Dihydrodipicolinate reductase, N-terminus SCD_RS04565 PF00117 Glutamine amidotransferase class-I SCD_RS04565 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SCD_RS04570 PF02142 MGS-like domain SCD_RS04570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SCD_RS04570 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SCD_RS04575 PF03449 Transcription elongation factor, N-terminal SCD_RS04575 PF01272 Transcription elongation factor, GreA/GreB, C-term SCD_RS04590 PF01728 FtsJ-like methyltransferase SCD_RS04595 PF06480 FtsH Extracellular SCD_RS04595 PF17862 AAA+ lid domain SCD_RS04595 PF01434 Peptidase family M41 SCD_RS04595 PF00004 ATPase family associated with various cellular activities (AAA) SCD_RS04600 PF00809 Pterin binding enzyme SCD_RS04605 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SCD_RS04605 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SCD_RS04605 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SCD_RS04605 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SCD_RS04610 PF00005 ABC transporter SCD_RS04615 PF00528 Binding-protein-dependent transport system inner membrane component SCD_RS04620 PF00528 Binding-protein-dependent transport system inner membrane component SCD_RS04635 PF12849 PBP superfamily domain SCD_RS04640 PF00196 Bacterial regulatory proteins, luxR family SCD_RS04640 PF00072 Response regulator receiver domain SCD_RS04650 PF08448 PAS fold SCD_RS04650 PF03705 CheR methyltransferase, all-alpha domain SCD_RS04650 PF01739 CheR methyltransferase, SAM binding domain SCD_RS04650 PF01339 CheB methylesterase SCD_RS04655 PF00121 Triosephosphate isomerase SCD_RS04660 PF03840 Preprotein translocase SecG subunit SCD_RS04670 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 SCD_RS04675 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SCD_RS04680 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SCD_RS04685 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SCD_RS04695 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SCD_RS04695 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SCD_RS04695 PF10531 SLBB domain SCD_RS04700 PF00384 Molybdopterin oxidoreductase SCD_RS04700 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SCD_RS04700 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal SCD_RS04705 PF00146 NADH dehydrogenase SCD_RS04710 PF12838 4Fe-4S dicluster domain SCD_RS04715 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SCD_RS04720 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SCD_RS04725 PF00361 Proton-conducting membrane transporter SCD_RS04725 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SCD_RS04730 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus SCD_RS04730 PF00361 Proton-conducting membrane transporter SCD_RS04735 PF00361 Proton-conducting membrane transporter SCD_RS04740 PF00293 NUDIX domain SCD_RS04745 PF00271 Helicase conserved C-terminal domain SCD_RS04745 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) SCD_RS04745 PF04851 Type III restriction enzyme, res subunit SCD_RS04745 PF08463 EcoEI R protein C-terminal SCD_RS04750 PF01541 GIY-YIG catalytic domain SCD_RS04755 PF12161 HsdM N-terminal domain SCD_RS04755 PF02384 N-6 DNA Methylase SCD_RS04795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS04795 PF00183 Hsp90 protein SCD_RS04850 PF01258 Prokaryotic dksA/traR C4-type zinc finger SCD_RS04855 PF00563 EAL domain SCD_RS04855 PF03707 Bacterial signalling protein N terminal repeat SCD_RS04855 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS04860 PF12848 ABC transporter SCD_RS04860 PF16326 ABC transporter C-terminal domain SCD_RS04860 PF00005 ABC transporter SCD_RS04885 PF04011 LemA family SCD_RS04890 PF01791 DeoC/LacD family aldolase SCD_RS04895 PF00005 ABC transporter SCD_RS04905 PF00216 Bacterial DNA-binding protein SCD_RS04915 PF00578 AhpC/TSA family SCD_RS04920 PF01844 HNH endonuclease SCD_RS04925 PF11490 DNA polymerase III polC-type N-terminus II SCD_RS04925 PF14480 DNA polymerase III polC-type N-terminus I SCD_RS04925 PF14579 Helix-hairpin-helix motif SCD_RS04925 PF07733 Bacterial DNA polymerase III alpha NTPase domain SCD_RS04925 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SCD_RS04925 PF00929 Exonuclease SCD_RS04925 PF02811 PHP domain SCD_RS04935 PF04358 DsrC like protein SCD_RS04990 PF04228 Putative neutral zinc metallopeptidase SCD_RS05030 PF02661 Fic/DOC family SCD_RS05030 PF13784 Fic/DOC family N-terminal SCD_RS05050 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SCD_RS05055 PF00111 2Fe-2S iron-sulfur cluster binding domain SCD_RS05055 PF01799 [2Fe-2S] binding domain SCD_RS05060 PF13419 Haloacid dehalogenase-like hydrolase SCD_RS05070 PF01979 Amidohydrolase family SCD_RS05075 PF00691 OmpA family SCD_RS05080 PF03989 DNA gyrase C-terminal domain, beta-propeller SCD_RS05080 PF00521 DNA gyrase/topoisomerase IV, subunit A SCD_RS05085 PF00266 Aminotransferase class-V SCD_RS05090 PF00800 Prephenate dehydratase SCD_RS05090 PF01817 Chorismate mutase type II SCD_RS05090 PF01842 ACT domain SCD_RS05095 PF00155 Aminotransferase class I and II SCD_RS05100 PF00793 DAHP synthetase I family SCD_RS05100 PF18152 DAHP synthase ferredoxin-like domain SCD_RS05105 PF01842 ACT domain SCD_RS05105 PF02153 Prephenate dehydrogenase SCD_RS05110 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SCD_RS05115 PF02224 Cytidylate kinase SCD_RS05120 PF00575 S1 RNA binding domain SCD_RS05125 PF00216 Bacterial DNA-binding protein SCD_RS05135 PF18073 Rubredoxin metal binding domain SCD_RS05140 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SCD_RS05145 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SCD_RS05145 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SCD_RS05145 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SCD_RS05150 PF00294 pfkB family carbohydrate kinase SCD_RS05155 PF01370 NAD dependent epimerase/dehydratase family SCD_RS05170 PF00291 Pyridoxal-phosphate dependent enzyme SCD_RS05200 PF01938 TRAM domain SCD_RS05200 PF05958 tRNA (Uracil-5-)-methyltransferase SCD_RS05205 PF01027 Inhibitor of apoptosis-promoting Bax1 SCD_RS05215 PF09371 Tex-like protein N-terminal domain SCD_RS05215 PF16921 Tex protein YqgF-like domain SCD_RS05215 PF17674 HHH domain SCD_RS05215 PF00575 S1 RNA binding domain SCD_RS05230 PF00005 ABC transporter SCD_RS05230 PF03459 TOBE domain SCD_RS05235 PF00528 Binding-protein-dependent transport system inner membrane component SCD_RS05245 PF01242 6-pyruvoyl tetrahydropterin synthase SCD_RS05260 PF00696 Amino acid kinase family SCD_RS05260 PF01842 ACT domain SCD_RS05260 PF13840 ACT domain SCD_RS05375 PF01695 IstB-like ATP binding protein SCD_RS05385 PF00563 EAL domain SCD_RS05385 PF08668 HDOD domain SCD_RS05390 PF01842 ACT domain SCD_RS05395 PF04542 Sigma-70 region 2 SCD_RS05395 PF04545 Sigma-70, region 4 SCD_RS05395 PF00140 Sigma-70 factor, region 1.2 SCD_RS05395 PF04539 Sigma-70 region 3 SCD_RS05400 PF00480 ROK family SCD_RS05405 PF00717 Peptidase S24-like SCD_RS05410 PF11799 impB/mucB/samB family C-terminal domain SCD_RS05410 PF00817 impB/mucB/samB family SCD_RS05435 PF12704 MacB-like periplasmic core domain SCD_RS05435 PF02687 FtsX-like permease family SCD_RS05440 PF00005 ABC transporter SCD_RS05450 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS05450 PF00563 EAL domain SCD_RS05450 PF03707 Bacterial signalling protein N terminal repeat SCD_RS05460 PF07715 TonB-dependent Receptor Plug Domain SCD_RS05460 PF00593 TonB dependent receptor SCD_RS05465 PF03772 Competence protein SCD_RS05465 PF00753 Metallo-beta-lactamase superfamily SCD_RS05470 PF02824 TGS domain SCD_RS05470 PF13291 ACT domain SCD_RS05470 PF04607 Region found in RelA / SpoT proteins SCD_RS05480 PF06167 Glucose-regulated metallo-peptidase M90 SCD_RS05490 PF02824 TGS domain SCD_RS05490 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SCD_RS05490 PF03129 Anticodon binding domain SCD_RS05490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SCD_RS05495 PF05198 Translation initiation factor IF-3, N-terminal domain SCD_RS05495 PF00707 Translation initiation factor IF-3, C-terminal domain SCD_RS05500 PF01632 Ribosomal protein L35 SCD_RS05505 PF00453 Ribosomal protein L20 SCD_RS05510 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SCD_RS05510 PF01409 tRNA synthetases class II core domain (F) SCD_RS05515 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SCD_RS05515 PF01588 Putative tRNA binding domain SCD_RS05515 PF03147 Ferredoxin-fold anticodon binding domain SCD_RS05515 PF03484 tRNA synthetase B5 domain SCD_RS05515 PF03483 B3/4 domain SCD_RS05520 PF00216 Bacterial DNA-binding protein SCD_RS05535 PF01975 Survival protein SurE SCD_RS05545 PF01476 LysM domain SCD_RS05545 PF01551 Peptidase family M23 SCD_RS05550 PF04539 Sigma-70 region 3 SCD_RS05550 PF00140 Sigma-70 factor, region 1.2 SCD_RS05550 PF04542 Sigma-70 region 2 SCD_RS05550 PF04545 Sigma-70, region 4 SCD_RS05555 PF00072 Response regulator receiver domain SCD_RS05555 PF01339 CheB methylesterase SCD_RS05560 PF01739 CheR methyltransferase, SAM binding domain SCD_RS05560 PF03705 CheR methyltransferase, all-alpha domain SCD_RS05565 PF13419 Haloacid dehalogenase-like hydrolase SCD_RS05570 PF03707 Bacterial signalling protein N terminal repeat SCD_RS05570 PF00563 EAL domain SCD_RS05570 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS05575 PF01590 GAF domain SCD_RS05575 PF00360 Phytochrome region SCD_RS05575 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS05575 PF00563 EAL domain SCD_RS05585 PF00155 Aminotransferase class I and II SCD_RS05590 PF01842 ACT domain SCD_RS05590 PF00742 Homoserine dehydrogenase SCD_RS05590 PF03447 Homoserine dehydrogenase, NAD binding domain SCD_RS05595 PF00291 Pyridoxal-phosphate dependent enzyme SCD_RS05595 PF14821 Threonine synthase N terminus SCD_RS05610 PF02653 Branched-chain amino acid transport system / permease component SCD_RS05615 PF00005 ABC transporter SCD_RS05615 PF12399 Branched-chain amino acid ATP-binding cassette transporter SCD_RS05620 PF00005 ABC transporter SCD_RS05625 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SCD_RS05625 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SCD_RS05630 PF02913 FAD linked oxidases, C-terminal domain SCD_RS05630 PF01565 FAD binding domain SCD_RS05635 PF01565 FAD binding domain SCD_RS05640 PF02754 Cysteine-rich domain SCD_RS05640 PF13183 4Fe-4S dicluster domain SCD_RS05645 PF00266 Aminotransferase class-V SCD_RS05650 PF00578 AhpC/TSA family SCD_RS05660 PF10431 C-terminal, D2-small domain, of ClpB protein SCD_RS05660 PF00004 ATPase family associated with various cellular activities (AAA) SCD_RS05660 PF07724 AAA domain (Cdc48 subfamily) SCD_RS05660 PF17871 AAA lid domain SCD_RS05660 PF02861 Clp amino terminal domain, pathogenicity island component SCD_RS05665 PF01894 Uncharacterised protein family UPF0047 SCD_RS05690 PF00072 Response regulator receiver domain SCD_RS05690 PF00486 Transcriptional regulatory protein, C terminal SCD_RS05695 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS05695 PF03707 Bacterial signalling protein N terminal repeat SCD_RS05695 PF00563 EAL domain SCD_RS05700 PF01292 Prokaryotic cytochrome b561 SCD_RS05715 PF04143 Sulphur transport SCD_RS05725 PF01292 Prokaryotic cytochrome b561 SCD_RS05740 PF00465 Iron-containing alcohol dehydrogenase SCD_RS05755 PF00528 Binding-protein-dependent transport system inner membrane component SCD_RS05760 PF00528 Binding-protein-dependent transport system inner membrane component SCD_RS05760 PF12911 N-terminal TM domain of oligopeptide transport permease C SCD_RS05765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SCD_RS05765 PF00005 ABC transporter SCD_RS05770 PF01464 Transglycosylase SLT domain SCD_RS05770 PF01476 LysM domain SCD_RS05775 PF16123 Hydroxyacylglutathione hydrolase C-terminus SCD_RS05775 PF00753 Metallo-beta-lactamase superfamily SCD_RS05785 PF00075 RNase H SCD_RS05790 PF00929 Exonuclease SCD_RS05815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SCD_RS05815 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SCD_RS05820 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SCD_RS05820 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SCD_RS05840 PF00749 tRNA synthetases class I (E and Q), catalytic domain SCD_RS05850 PF04055 Radical SAM superfamily SCD_RS05855 PF16360 GTP-binding GTPase Middle Region SCD_RS05855 PF01926 50S ribosome-binding GTPase SCD_RS05855 PF13167 GTP-binding GTPase N-terminal SCD_RS05865 PF03548 Outer membrane lipoprotein carrier protein LolA SCD_RS05870 PF12002 MgsA AAA+ ATPase C terminal SCD_RS05870 PF00004 ATPase family associated with various cellular activities (AAA) SCD_RS05870 PF16193 AAA C-terminal domain SCD_RS05875 PF02403 Seryl-tRNA synthetase N-terminal domain SCD_RS05875 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SCD_RS05880 PF01464 Transglycosylase SLT domain SCD_RS05880 PF00497 Bacterial extracellular solute-binding proteins, family 3 SCD_RS05940 PF03600 Citrate transporter SCD_RS05945 PF00294 pfkB family carbohydrate kinase SCD_RS05950 PF00924 Mechanosensitive ion channel SCD_RS05970 PF00654 Voltage gated chloride channel SCD_RS05990 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SCD_RS05990 PF00384 Molybdopterin oxidoreductase SCD_RS05990 PF01568 Molydopterin dinucleotide binding domain SCD_RS05995 PF13247 4Fe-4S dicluster domain SCD_RS05995 PF12800 4Fe-4S binding domain SCD_RS06000 PF04976 DMSO reductase anchor subunit (DmsC) SCD_RS06005 PF00753 Metallo-beta-lactamase superfamily SCD_RS06025 PF00106 short chain dehydrogenase SCD_RS06035 PF00563 EAL domain SCD_RS06035 PF08668 HDOD domain SCD_RS06040 PF00072 Response regulator receiver domain SCD_RS06040 PF01627 Hpt domain SCD_RS06040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS06040 PF02895 Signal transducing histidine kinase, homodimeric domain SCD_RS06040 PF01584 CheW-like domain SCD_RS06045 PF04344 Chemotaxis phosphatase, CheZ SCD_RS06050 PF00072 Response regulator receiver domain SCD_RS06055 PF00072 Response regulator receiver domain SCD_RS06055 PF01584 CheW-like domain SCD_RS06060 PF00072 Response regulator receiver domain SCD_RS06060 PF01584 CheW-like domain SCD_RS06065 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS06065 PF00989 PAS fold SCD_RS06065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS06070 PF00158 Sigma-54 interaction domain SCD_RS06070 PF02954 Bacterial regulatory protein, Fis family SCD_RS06070 PF00072 Response regulator receiver domain SCD_RS06075 PF02049 Flagellar hook-basal body complex protein FliE SCD_RS06080 PF01514 Secretory protein of YscJ/FliF family SCD_RS06080 PF08345 Flagellar M-ring protein C-terminal SCD_RS06085 PF01706 FliG C-terminal domain SCD_RS06085 PF14841 FliG middle domain SCD_RS06085 PF14842 FliG N-terminal domain SCD_RS06095 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SCD_RS06095 PF18269 T3SS EscN ATPase C-terminal domain SCD_RS06115 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SCD_RS06115 PF02154 Flagellar motor switch protein FliM SCD_RS06120 PF16973 Flagellar motor switch protein FliN N-terminal SCD_RS06120 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SCD_RS06125 PF04347 Flagellar biosynthesis protein, FliO SCD_RS06130 PF00813 FliP family SCD_RS06135 PF01313 Bacterial export proteins, family 3 SCD_RS06140 PF01311 Bacterial export proteins, family 1 SCD_RS06155 PF03477 ATP cone domain SCD_RS06155 PF02867 Ribonucleotide reductase, barrel domain SCD_RS06155 PF00317 Ribonucleotide reductase, all-alpha domain SCD_RS06160 PF00701 Dihydrodipicolinate synthetase family SCD_RS06165 PF06804 NlpB/DapX lipoprotein SCD_RS06170 PF00753 Metallo-beta-lactamase superfamily SCD_RS06185 PF00578 AhpC/TSA family SCD_RS06190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SCD_RS06200 PF00459 Inositol monophosphatase family SCD_RS06205 PF00588 SpoU rRNA Methylase family SCD_RS06210 PF00132 Bacterial transferase hexapeptide (six repeats) SCD_RS06215 PF02082 Transcriptional regulator SCD_RS06220 PF00266 Aminotransferase class-V SCD_RS06225 PF00266 Aminotransferase class-V SCD_RS06230 PF01592 NifU-like N terminal domain SCD_RS06235 PF01521 Iron-sulphur cluster biosynthesis SCD_RS06240 PF07743 HSCB C-terminal oligomerisation domain SCD_RS06245 PF00012 Hsp70 protein SCD_RS06250 PF00111 2Fe-2S iron-sulfur cluster binding domain SCD_RS06255 PF04384 Iron-sulphur cluster assembly SCD_RS06260 PF01312 FlhB HrpN YscU SpaS Family SCD_RS06265 PF00771 FHIPEP family SCD_RS06270 PF00448 SRP54-type protein, GTPase domain SCD_RS06275 PF10609 NUBPL iron-transfer P-loop NTPase SCD_RS06280 PF04542 Sigma-70 region 2 SCD_RS06280 PF04539 Sigma-70 region 3 SCD_RS06280 PF04545 Sigma-70, region 4 SCD_RS06285 PF01618 MotA/TolQ/ExbB proton channel family SCD_RS06290 PF00691 OmpA family SCD_RS06290 PF13677 Membrane MotB of proton-channel complex MotA/MotB SCD_RS06305 PF02391 MoaE protein SCD_RS06310 PF02597 ThiS family SCD_RS06315 PF00994 Probable molybdopterin binding domain SCD_RS06315 PF03453 MoeA N-terminal region (domain I and II) SCD_RS06315 PF03454 MoeA C-terminal region (domain IV) SCD_RS06320 PF03205 Molybdopterin guanine dinucleotide synthesis protein B SCD_RS06325 PF01668 SmpB protein SCD_RS06330 PF03364 Polyketide cyclase / dehydrase and lipid transport SCD_RS06335 PF03658 RnfH family Ubiquitin SCD_RS06350 PF00478 IMP dehydrogenase / GMP reductase domain SCD_RS06350 PF00571 CBS domain SCD_RS06355 PF00958 GMP synthase C terminal domain SCD_RS06355 PF00117 Glutamine amidotransferase class-I SCD_RS06355 PF02540 NAD synthase SCD_RS06365 PF14437 MafB19-like deaminase SCD_RS06370 PF17969 L,D-transpeptidase C-terminal domain SCD_RS06370 PF03734 L,D-transpeptidase catalytic domain SCD_RS06375 PF11992 Domain of unknown function (DUF3488) SCD_RS06375 PF13559 Domain of unknown function (DUF4129) SCD_RS06375 PF01841 Transglutaminase-like superfamily SCD_RS06385 PF07726 ATPase family associated with various cellular activities (AAA) SCD_RS06385 PF17863 AAA lid domain SCD_RS06390 PF02685 Glucokinase SCD_RS06400 PF04055 Radical SAM superfamily SCD_RS06400 PF06463 Molybdenum Cofactor Synthesis C SCD_RS06405 PF03167 Uracil DNA glycosylase superfamily SCD_RS06415 PF02151 UvrB/uvrC motif SCD_RS06415 PF08459 UvrC Helix-hairpin-helix N-terminal SCD_RS06415 PF01541 GIY-YIG catalytic domain SCD_RS06420 PF01066 CDP-alcohol phosphatidyltransferase SCD_RS06435 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS06435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS06435 PF00989 PAS fold SCD_RS06440 PF02954 Bacterial regulatory protein, Fis family SCD_RS06440 PF00158 Sigma-54 interaction domain SCD_RS06440 PF00072 Response regulator receiver domain SCD_RS06510 PF05175 Methyltransferase small domain SCD_RS06510 PF17827 PrmC N-terminal domain SCD_RS06515 PF17820 PDZ domain SCD_RS06515 PF18509 Magnetochrome domain SCD_RS06520 PF00263 Bacterial type II and III secretion system protein SCD_RS06520 PF03958 Bacterial type II/III secretion system short domain SCD_RS06525 PF00437 Type II/IV secretion system protein SCD_RS06530 PF00482 Type II secretion system (T2SS), protein F SCD_RS06540 PF07963 Prokaryotic N-terminal methylation motif SCD_RS06540 PF08334 Type II secretion system (T2SS), protein G SCD_RS06545 PF12019 Type II transport protein GspH SCD_RS06545 PF07963 Prokaryotic N-terminal methylation motif SCD_RS06550 PF02501 Type II secretion system (T2SS), protein I SCD_RS06550 PF07963 Prokaryotic N-terminal methylation motif SCD_RS06555 PF07963 Prokaryotic N-terminal methylation motif SCD_RS06555 PF11612 Type II secretion system (T2SS), protein J SCD_RS06560 PF03934 Type II secretion system (T2SS), protein K SCD_RS06600 PF13401 AAA domain SCD_RS06600 PF01471 Putative peptidoglycan binding domain SCD_RS06610 PF16363 GDP-mannose 4,6 dehydratase SCD_RS06615 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SCD_RS06615 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SCD_RS06615 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SCD_RS06620 PF01370 NAD dependent epimerase/dehydratase family SCD_RS06640 PF13439 Glycosyltransferase Family 4 SCD_RS06655 PF14602 Hexapeptide repeat of succinyl-transferase SCD_RS06655 PF12464 Maltose acetyltransferase SCD_RS06660 PF01209 ubiE/COQ5 methyltransferase family SCD_RS06670 PF00534 Glycosyl transferases group 1 SCD_RS06670 PF13439 Glycosyltransferase Family 4 SCD_RS06680 PF00534 Glycosyl transferases group 1 SCD_RS06680 PF13579 Glycosyl transferase 4-like domain SCD_RS06690 PF00953 Glycosyl transferase family 4 SCD_RS06695 PF16363 GDP-mannose 4,6 dehydratase SCD_RS06700 PF01370 NAD dependent epimerase/dehydratase family SCD_RS06710 PF00483 Nucleotidyl transferase SCD_RS06710 PF01050 Mannose-6-phosphate isomerase SCD_RS06715 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SCD_RS06745 PF07152 YaeQ protein SCD_RS06760 PF00085 Thioredoxin SCD_RS06765 PF02630 SCO1/SenC SCD_RS06780 PF01546 Peptidase family M20/M25/M40 SCD_RS06780 PF07687 Peptidase dimerisation domain SCD_RS06790 PF08241 Methyltransferase domain SCD_RS06800 PF17284 Spermidine synthase tetramerisation domain SCD_RS06840 PF12848 ABC transporter SCD_RS06840 PF00005 ABC transporter SCD_RS06845 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ SCD_RS06855 PF00565 Staphylococcal nuclease homologue SCD_RS06860 PF00570 HRDC domain SCD_RS06860 PF00271 Helicase conserved C-terminal domain SCD_RS06860 PF09382 RQC domain SCD_RS06860 PF00270 DEAD/DEAH box helicase SCD_RS06860 PF16124 RecQ zinc-binding SCD_RS06865 PF10996 Beta-Casp domain SCD_RS06865 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SCD_RS06865 PF00753 Metallo-beta-lactamase superfamily SCD_RS06880 PF02910 Fumarate reductase flavoprotein C-term SCD_RS06880 PF00890 FAD binding domain SCD_RS06885 PF04542 Sigma-70 region 2 SCD_RS06885 PF08281 Sigma-70, region 4 SCD_RS06895 PF17188 MucB/RseB C-terminal domain SCD_RS06895 PF03888 MucB/RseB N-terminal domain SCD_RS06905 PF13180 PDZ domain SCD_RS06915 PF06421 GTP-binding protein LepA C-terminus SCD_RS06915 PF03144 Elongation factor Tu domain 2 SCD_RS06915 PF00009 Elongation factor Tu GTP binding domain SCD_RS06915 PF00679 Elongation factor G C-terminus SCD_RS06920 PF10502 Signal peptidase, peptidase S26 SCD_RS06930 PF14622 Ribonuclease-III-like SCD_RS06930 PF00035 Double-stranded RNA binding motif SCD_RS06935 PF01926 50S ribosome-binding GTPase SCD_RS06935 PF07650 KH domain SCD_RS06940 PF00270 DEAD/DEAH box helicase SCD_RS06940 PF00271 Helicase conserved C-terminal domain SCD_RS06970 PF11967 Recombination protein O N terminal SCD_RS06970 PF02565 Recombination protein O C terminal SCD_RS06975 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ SCD_RS06980 PF01648 4'-phosphopantetheinyl transferase superfamily SCD_RS06985 PF00933 Glycosyl hydrolase family 3 N terminal domain SCD_RS06990 PF05362 Lon protease (S16) C-terminal proteolytic domain SCD_RS06990 PF13654 AAA domain SCD_RS06995 PF00563 EAL domain SCD_RS06995 PF08448 PAS fold SCD_RS06995 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS07000 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS07000 PF00563 EAL domain SCD_RS07000 PF03707 Bacterial signalling protein N terminal repeat SCD_RS07020 PF00440 Bacterial regulatory proteins, tetR family SCD_RS07035 PF00873 AcrB/AcrD/AcrF family SCD_RS07040 PF13533 Biotin-lipoyl like SCD_RS07050 PF00005 ABC transporter SCD_RS07070 PF05016 ParE toxin of type II toxin-antitoxin system, parDE SCD_RS07090 PF07690 Major Facilitator Superfamily SCD_RS07100 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS07100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS07100 PF00672 HAMP domain SCD_RS07105 PF00486 Transcriptional regulatory protein, C terminal SCD_RS07105 PF00072 Response regulator receiver domain SCD_RS07125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SCD_RS07135 PF00005 ABC transporter SCD_RS07140 PF00005 ABC transporter SCD_RS07185 PF00440 Bacterial regulatory proteins, tetR family SCD_RS07190 PF01618 MotA/TolQ/ExbB proton channel family SCD_RS07220 PF02040 Arsenical pump membrane protein SCD_RS07225 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SCD_RS07240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SCD_RS07240 PF08447 PAS fold SCD_RS07245 PF03853 YjeF-related protein N-terminus SCD_RS07245 PF01256 Carbohydrate kinase SCD_RS07250 PF00563 EAL domain SCD_RS07250 PF08668 HDOD domain SCD_RS07265 PF00072 Response regulator receiver domain SCD_RS07270 PF00486 Transcriptional regulatory protein, C terminal SCD_RS07270 PF00072 Response regulator receiver domain SCD_RS07275 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS07275 PF00563 EAL domain SCD_RS07275 PF00072 Response regulator receiver domain SCD_RS07280 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SCD_RS07280 PF02769 AIR synthase related protein, C-terminal domain SCD_RS07280 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal SCD_RS07295 PF03795 YCII-related domain SCD_RS07300 PF04279 Intracellular septation protein A SCD_RS07305 PF02811 PHP domain SCD_RS07310 PF01300 Telomere recombination SCD_RS07315 PF02163 Peptidase family M50 SCD_RS07320 PF00579 tRNA synthetases class I (W and Y) SCD_RS07325 PF05362 Lon protease (S16) C-terminal proteolytic domain SCD_RS07325 PF00004 ATPase family associated with various cellular activities (AAA) SCD_RS07325 PF02190 ATP-dependent protease La (LON) substrate-binding domain SCD_RS07330 PF02616 Segregation and condensation protein ScpA SCD_RS07335 PF04079 Segregation and condensation complex subunit ScpB SCD_RS07340 PF01479 S4 domain SCD_RS07340 PF00849 RNA pseudouridylate synthase SCD_RS07355 PF05175 Methyltransferase small domain SCD_RS07360 PF01546 Peptidase family M20/M25/M40 SCD_RS07360 PF07687 Peptidase dimerisation domain SCD_RS07365 PF03960 ArsC family SCD_RS07370 PF02127 Aminopeptidase I zinc metalloprotease (M18) SCD_RS07375 PF03972 MmgE/PrpD family SCD_RS07380 PF00285 Citrate synthase, C-terminal domain SCD_RS07390 PF00392 Bacterial regulatory proteins, gntR family SCD_RS07390 PF07702 UTRA domain SCD_RS07395 PF00390 Malic enzyme, N-terminal domain SCD_RS07395 PF03949 Malic enzyme, NAD binding domain SCD_RS07405 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SCD_RS07410 PF02910 Fumarate reductase flavoprotein C-term SCD_RS07410 PF00890 FAD binding domain SCD_RS07415 PF13085 2Fe-2S iron-sulfur cluster binding domain SCD_RS07420 PF03937 Flavinator of succinate dehydrogenase SCD_RS07425 PF00285 Citrate synthase, C-terminal domain SCD_RS07430 PF16078 2-oxoglutarate dehydrogenase N-terminus SCD_RS07430 PF00676 Dehydrogenase E1 component SCD_RS07430 PF02779 Transketolase, pyrimidine binding domain SCD_RS07430 PF16870 2-oxoglutarate dehydrogenase C-terminal SCD_RS07435 PF00364 Biotin-requiring enzyme SCD_RS07435 PF02817 e3 binding domain SCD_RS07435 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SCD_RS07440 PF07992 Pyridine nucleotide-disulphide oxidoreductase SCD_RS07440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SCD_RS07445 PF03969 AFG1-like ATPase SCD_RS07450 PF08240 Alcohol dehydrogenase GroES-like domain SCD_RS07450 PF00107 Zinc-binding dehydrogenase SCD_RS07455 PF13193 AMP-binding enzyme C-terminal domain SCD_RS07455 PF16177 Acetyl-coenzyme A synthetase N-terminus SCD_RS07455 PF00501 AMP-binding enzyme SCD_RS07460 PF00072 Response regulator receiver domain SCD_RS07460 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS07465 PF10672 S-adenosylmethionine-dependent methyltransferase SCD_RS07470 PF00270 DEAD/DEAH box helicase SCD_RS07470 PF00271 Helicase conserved C-terminal domain SCD_RS07480 PF12169 DNA polymerase III subunits gamma and tau domain III SCD_RS07480 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding SCD_RS07480 PF12170 DNA polymerase III tau subunit V interacting with alpha SCD_RS07485 PF02575 YbaB/EbfC DNA-binding family SCD_RS07490 PF13662 Toprim domain SCD_RS07490 PF02132 RecR protein SCD_RS07495 PF02405 Permease MlaE SCD_RS07500 PF00005 ABC transporter SCD_RS07515 PF00072 Response regulator receiver domain SCD_RS07515 PF00196 Bacterial regulatory proteins, luxR family SCD_RS07530 PF00216 Bacterial DNA-binding protein SCD_RS07535 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV SCD_RS07545 PF01026 TatD related DNase SCD_RS07555 PF09115 DNA polymerase III, delta subunit, C terminal SCD_RS07560 PF02223 Thymidylate kinase SCD_RS07565 PF02618 YceG-like family SCD_RS07570 PF01063 Amino-transferase class IV SCD_RS07575 PF00425 chorismate binding enzyme SCD_RS07575 PF04715 Anthranilate synthase component I, N terminal region SCD_RS07580 PF02801 Beta-ketoacyl synthase, C-terminal domain SCD_RS07580 PF00109 Beta-ketoacyl synthase, N-terminal domain SCD_RS07585 PF00550 Phosphopantetheine attachment site SCD_RS07595 PF00698 Acyl transferase domain SCD_RS07600 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SCD_RS07600 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SCD_RS07605 PF02504 Fatty acid synthesis protein SCD_RS07610 PF01783 Ribosomal L32p protein family SCD_RS07615 PF02620 Large ribosomal RNA subunit accumulation protein YceD SCD_RS07620 PF00289 Biotin carboxylase, N-terminal domain SCD_RS07620 PF02785 Biotin carboxylase C-terminal domain SCD_RS07620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SCD_RS07625 PF02436 Conserved carboxylase domain SCD_RS07625 PF00682 HMGL-like SCD_RS07625 PF00364 Biotin-requiring enzyme SCD_RS07630 PF02545 Maf-like protein SCD_RS07635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SCD_RS07645 PF06965 Na+/H+ antiporter 1 SCD_RS07645 PF01343 Peptidase family S49 SCD_RS07650 PF13419 Haloacid dehalogenase-like hydrolase SCD_RS07655 PF01479 S4 domain SCD_RS07655 PF00849 RNA pseudouridylate synthase SCD_RS07660 PF00575 S1 RNA binding domain SCD_RS07660 PF12111 Polyribonucleotide phosphorylase C terminal SCD_RS07660 PF10150 Ribonuclease E/G family SCD_RS07665 PF01451 Low molecular weight phosphotyrosine protein phosphatase SCD_RS07675 PF00271 Helicase conserved C-terminal domain SCD_RS07675 PF12344 Ultra-violet resistance protein B SCD_RS07675 PF02151 UvrB/uvrC motif SCD_RS07675 PF17757 UvrB interaction domain SCD_RS07675 PF04851 Type III restriction enzyme, res subunit SCD_RS07680 PF00155 Aminotransferase class I and II SCD_RS07695 PF03748 Flagellar basal body-associated protein FliL SCD_RS07705 PF03831 PhnA domain SCD_RS07705 PF08274 PhnA Zinc-Ribbon SCD_RS07725 PF02810 SEC-C motif SCD_RS07725 PF01043 SecA preprotein cross-linking domain SCD_RS07725 PF07516 SecA Wing and Scaffold domain SCD_RS07725 PF07517 SecA DEAD-like domain SCD_RS07745 PF00563 EAL domain SCD_RS07745 PF08668 HDOD domain SCD_RS07760 PF00563 EAL domain SCD_RS07760 PF08448 PAS fold SCD_RS07760 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS07765 PF02646 RmuC family SCD_RS07770 PF00679 Elongation factor G C-terminus SCD_RS07770 PF03144 Elongation factor Tu domain 2 SCD_RS07770 PF00009 Elongation factor Tu GTP binding domain SCD_RS07790 PF01370 NAD dependent epimerase/dehydratase family SCD_RS07790 PF02222 ATP-grasp domain SCD_RS07800 PF00005 ABC transporter SCD_RS07805 PF13472 GDSL-like Lipase/Acylhydrolase family SCD_RS07810 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS07810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS07810 PF00672 HAMP domain SCD_RS07815 PF00072 Response regulator receiver domain SCD_RS07815 PF00486 Transcriptional regulatory protein, C terminal SCD_RS07820 PF00586 AIR synthase related protein, N-terminal domain SCD_RS07820 PF02769 AIR synthase related protein, C-terminal domain SCD_RS07825 PF00581 Rhodanese-like domain SCD_RS07850 PF00578 AhpC/TSA family SCD_RS07855 PF13638 PIN domain SCD_RS07855 PF02562 PhoH-like protein SCD_RS07865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SCD_RS07865 PF03466 LysR substrate binding domain SCD_RS07870 PF07690 Major Facilitator Superfamily SCD_RS07880 PF04536 TPM domain SCD_RS07885 PF04011 LemA family SCD_RS07890 PF03167 Uracil DNA glycosylase superfamily SCD_RS07895 PF00583 Acetyltransferase (GNAT) family SCD_RS07900 PF00814 Glycoprotease family SCD_RS07910 PF04851 Type III restriction enzyme, res subunit SCD_RS07910 PF13307 Helicase C-terminal domain SCD_RS07920 PF00374 Nickel-dependent hydrogenase SCD_RS07925 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SCD_RS07930 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SCD_RS07935 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SCD_RS07935 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SCD_RS07940 PF03109 ABC1 family SCD_RS07950 PF00271 Helicase conserved C-terminal domain SCD_RS07950 PF17757 UvrB interaction domain SCD_RS07950 PF02559 CarD-like/TRCF domain SCD_RS07950 PF00270 DEAD/DEAH box helicase SCD_RS07950 PF03461 TRCF domain SCD_RS07960 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS07965 PF04977 Septum formation initiator SCD_RS07970 PF03952 Enolase, N-terminal domain SCD_RS07970 PF00113 Enolase, C-terminal TIM barrel domain SCD_RS07975 PF00793 DAHP synthetase I family SCD_RS07980 PF00117 Glutamine amidotransferase class-I SCD_RS07980 PF06418 CTP synthase N-terminus SCD_RS07985 PF07664 Ferrous iron transport protein B C terminus SCD_RS07985 PF07670 Nucleoside recognition SCD_RS07985 PF02421 Ferrous iron transport protein B SCD_RS07990 PF00588 SpoU rRNA Methylase family SCD_RS07990 PF08032 RNA 2'-O ribose methyltransferase substrate binding SCD_RS08010 PF00691 OmpA family SCD_RS08010 PF13677 Membrane MotB of proton-channel complex MotA/MotB SCD_RS08015 PF01618 MotA/TolQ/ExbB proton channel family SCD_RS08025 PF01351 Ribonuclease HII SCD_RS08030 PF02684 Lipid-A-disaccharide synthetase SCD_RS08035 PF00132 Bacterial transferase hexapeptide (six repeats) SCD_RS08035 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SCD_RS08040 PF07977 FabA-like domain SCD_RS08045 PF00132 Bacterial transferase hexapeptide (six repeats) SCD_RS08045 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD SCD_RS08050 PF03938 Outer membrane protein (OmpH-like) SCD_RS08055 PF07244 Surface antigen variable number repeat SCD_RS08055 PF01103 Surface antigen SCD_RS08060 PF02163 Peptidase family M50 SCD_RS08060 PF17820 PDZ domain SCD_RS08065 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SCD_RS08065 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SCD_RS08065 PF13288 DXP reductoisomerase C-terminal domain SCD_RS08075 PF01255 Putative undecaprenyl diphosphate synthase SCD_RS08080 PF01765 Ribosome recycling factor SCD_RS08085 PF00696 Amino acid kinase family SCD_RS08090 PF00889 Elongation factor TS SCD_RS08095 PF00318 Ribosomal protein S2 SCD_RS08105 PF00557 Metallopeptidase family M24 SCD_RS08110 PF01966 HD domain SCD_RS08110 PF08335 GlnD PII-uridylyltransferase SCD_RS08115 PF00282 Pyridoxal-dependent decarboxylase conserved domain SCD_RS08130 PF01312 FlhB HrpN YscU SpaS Family SCD_RS08155 PF02561 Flagellar protein FliS SCD_RS08160 PF07195 Flagellar hook-associated protein 2 C-terminus SCD_RS08160 PF07196 Flagellin hook IN motif SCD_RS08160 PF02465 Flagellar hook-associated protein 2 N-terminus SCD_RS08170 PF00669 Bacterial flagellin N-terminal helical region SCD_RS08170 PF00669 Bacterial flagellin N-terminal helical region SCD_RS08170 PF00700 Bacterial flagellin C-terminal helical region SCD_RS08170 PF00700 Bacterial flagellin C-terminal helical region SCD_RS08185 PF00483 Nucleotidyl transferase SCD_RS08190 PF16363 GDP-mannose 4,6 dehydratase SCD_RS08195 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SCD_RS08200 PF08421 Putative zinc binding domain SCD_RS08200 PF08484 C-methyltransferase C-terminal domain SCD_RS08205 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SCD_RS08215 PF04989 Cephalosporin hydroxylase SCD_RS08220 PF01327 Polypeptide deformylase SCD_RS08225 PF01048 Phosphorylase superfamily SCD_RS08235 PF00156 Phosphoribosyl transferase domain SCD_RS08240 PF00483 Nucleotidyl transferase SCD_RS08245 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SCD_RS08245 PF01653 NAD-dependent DNA ligase adenylation domain SCD_RS08245 PF00533 BRCA1 C Terminus (BRCT) domain SCD_RS08245 PF12826 Helix-hairpin-helix motif SCD_RS08245 PF03120 NAD-dependent DNA ligase OB-fold domain SCD_RS08255 PF06470 SMC proteins Flexible Hinge Domain SCD_RS08255 PF02463 RecF/RecN/SMC N terminal domain SCD_RS08270 PF14489 QueF-like protein SCD_RS08275 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SCD_RS08300 PF00155 Aminotransferase class I and II SCD_RS08305 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal SCD_RS08305 PF14602 Hexapeptide repeat of succinyl-transferase SCD_RS08305 PF00132 Bacterial transferase hexapeptide (six repeats) SCD_RS08310 PF00733 Asparagine synthase SCD_RS08310 PF13537 Glutamine amidotransferase domain SCD_RS08320 PF05099 Tellurite resistance protein TerB SCD_RS08320 PF00226 DnaJ domain SCD_RS08325 PF13406 Transglycosylase SLT domain SCD_RS08335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SCD_RS08335 PF00529 HlyD membrane-fusion protein of T1SS SCD_RS08340 PF00873 AcrB/AcrD/AcrF family SCD_RS08345 PF02321 Outer membrane efflux protein SCD_RS08350 PF02321 Outer membrane efflux protein SCD_RS08355 PF00529 HlyD membrane-fusion protein of T1SS SCD_RS08355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SCD_RS08360 PF12704 MacB-like periplasmic core domain SCD_RS08360 PF02687 FtsX-like permease family SCD_RS08360 PF00005 ABC transporter SCD_RS08365 PF02687 FtsX-like permease family SCD_RS08365 PF00005 ABC transporter SCD_RS08365 PF12704 MacB-like periplasmic core domain SCD_RS08400 PF10135 Rod binding protein SCD_RS08400 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SCD_RS08405 PF02119 Flagellar P-ring protein SCD_RS08410 PF02107 Flagellar L-ring protein SCD_RS08415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SCD_RS08415 PF00460 Flagella basal body rod protein SCD_RS08420 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SCD_RS08420 PF00460 Flagella basal body rod protein SCD_RS08425 PF00460 Flagella basal body rod protein SCD_RS08425 PF07559 Flagellar basal body protein FlaE SCD_RS08425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SCD_RS08430 PF13860 FlgD Ig-like domain SCD_RS08430 PF13861 FlgD Tudor-like domain SCD_RS08430 PF03963 Flagellar hook capping protein - N-terminal region SCD_RS08435 PF00460 Flagella basal body rod protein SCD_RS08435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SCD_RS08440 PF00460 Flagella basal body rod protein SCD_RS08445 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS08455 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SCD_RS08455 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SCD_RS08460 PF13419 Haloacid dehalogenase-like hydrolase SCD_RS08465 PF01258 Prokaryotic dksA/traR C4-type zinc finger SCD_RS08475 PF00013 KH domain SCD_RS08475 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SCD_RS08475 PF01138 3' exoribonuclease family, domain 1 SCD_RS08475 PF03725 3' exoribonuclease family, domain 2 SCD_RS08475 PF00575 S1 RNA binding domain SCD_RS08480 PF00312 Ribosomal protein S15 SCD_RS08485 PF16198 tRNA pseudouridylate synthase B C-terminal domain SCD_RS08485 PF01509 TruB family pseudouridylate synthase (N terminal domain) SCD_RS08485 PF09157 Pseudouridine synthase II TruB, C-terminal SCD_RS08490 PF02033 Ribosome-binding factor A SCD_RS08495 PF04760 Translation initiation factor IF-2, N-terminal region SCD_RS08495 PF00009 Elongation factor Tu GTP binding domain SCD_RS08495 PF11987 Translation-initiation factor 2 SCD_RS08495 PF08364 Bacterial translation initiation factor IF-2 associated region SCD_RS08500 PF08529 NusA N-terminal domain SCD_RS08500 PF13184 NusA-like KH domain SCD_RS08505 PF17384 RimP C-terminal SH3 domain SCD_RS08505 PF02576 RimP N-terminal domain SCD_RS08540 PF01747 ATP-sulfurylase SCD_RS08540 PF14306 PUA-like domain SCD_RS08545 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit SCD_RS08545 PF13187 4Fe-4S dicluster domain SCD_RS08550 PF00890 FAD binding domain SCD_RS08560 PF08406 CbbQ/NirQ/NorQ C-terminal SCD_RS08560 PF07728 AAA domain (dynein-related subfamily) SCD_RS08565 PF00092 von Willebrand factor type A domain SCD_RS08570 PF00578 AhpC/TSA family SCD_RS08570 PF10417 C-terminal domain of 1-Cys peroxiredoxin SCD_RS08590 PF00753 Metallo-beta-lactamase superfamily SCD_RS08610 PF00226 DnaJ domain SCD_RS08610 PF00684 DnaJ central domain SCD_RS08610 PF01556 DnaJ C terminal domain SCD_RS08625 PF09397 Ftsk gamma domain SCD_RS08625 PF01580 FtsK/SpoIIIE family SCD_RS08625 PF13491 4TM region of DNA translocase FtsK/SpoIIIE SCD_RS08625 PF17854 FtsK alpha domain SCD_RS08630 PF07992 Pyridine nucleotide-disulphide oxidoreductase SCD_RS08640 PF00535 Glycosyl transferase family 2 SCD_RS08650 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase SCD_RS08655 PF01569 PAP2 superfamily SCD_RS08660 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase SCD_RS08665 PF00892 EamA-like transporter family SCD_RS08670 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SCD_RS08675 PF00535 Glycosyl transferase family 2 SCD_RS08680 PF01370 NAD dependent epimerase/dehydratase family SCD_RS08680 PF02911 Formyl transferase, C-terminal domain SCD_RS08680 PF00551 Formyl transferase SCD_RS08685 PF01370 NAD dependent epimerase/dehydratase family SCD_RS08685 PF02911 Formyl transferase, C-terminal domain SCD_RS08685 PF00551 Formyl transferase SCD_RS08690 PF01522 Polysaccharide deacetylase SCD_RS08695 PF02542 YgbB family SCD_RS08700 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SCD_RS08705 PF01875 Memo-like protein SCD_RS08720 PF00156 Phosphoribosyl transferase domain SCD_RS08720 PF01738 Dienelactone hydrolase family SCD_RS08725 PF00156 Phosphoribosyl transferase domain SCD_RS08725 PF01738 Dienelactone hydrolase family SCD_RS08730 PF00877 NlpC/P60 family SCD_RS08735 PF01734 Patatin-like phospholipase SCD_RS08740 PF00072 Response regulator receiver domain SCD_RS08740 PF00672 HAMP domain SCD_RS08740 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS08740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS08740 PF01627 Hpt domain SCD_RS08740 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SCD_RS08765 PF00216 Bacterial DNA-binding protein SCD_RS08770 PF05362 Lon protease (S16) C-terminal proteolytic domain SCD_RS08770 PF02190 ATP-dependent protease La (LON) substrate-binding domain SCD_RS08770 PF00004 ATPase family associated with various cellular activities (AAA) SCD_RS08775 PF06689 ClpX C4-type zinc finger SCD_RS08775 PF10431 C-terminal, D2-small domain, of ClpB protein SCD_RS08775 PF07724 AAA domain (Cdc48 subfamily) SCD_RS08780 PF00574 Clp protease SCD_RS08785 PF05697 Bacterial trigger factor protein (TF) SCD_RS08785 PF05698 Bacterial trigger factor protein (TF) C-terminus SCD_RS08785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SCD_RS08805 PF01593 Flavin containing amine oxidoreductase SCD_RS08810 PF00106 short chain dehydrogenase SCD_RS08815 PF00498 FHA domain SCD_RS08825 PF00069 Protein kinase domain SCD_RS08825 PF03793 PASTA domain SCD_RS08840 PF18073 Rubredoxin metal binding domain SCD_RS08845 PF01168 Alanine racemase, N-terminal domain SCD_RS08845 PF00842 Alanine racemase, C-terminal domain SCD_RS08850 PF03796 DnaB-like helicase C terminal domain SCD_RS08850 PF00772 DnaB-like helicase N terminal domain SCD_RS08860 PF01084 Ribosomal protein S18 SCD_RS08870 PF01250 Ribosomal protein S6 SCD_RS08875 PF08032 RNA 2'-O ribose methyltransferase substrate binding SCD_RS08875 PF00588 SpoU rRNA Methylase family SCD_RS08880 PF08461 Ribonuclease R winged-helix domain SCD_RS08880 PF00575 S1 RNA binding domain SCD_RS08880 PF00773 RNB domain SCD_RS08880 PF08206 Ribonuclease B OB domain SCD_RS08880 PF17876 Cold shock domain SCD_RS08890 PF00709 Adenylosuccinate synthetase SCD_RS08895 PF13393 Histidyl-tRNA synthetase SCD_RS08905 PF01145 SPFH domain / Band 7 family SCD_RS08910 PF12221 Bacterial membrane protein N terminal SCD_RS08910 PF01145 SPFH domain / Band 7 family SCD_RS08915 PF16360 GTP-binding GTPase Middle Region SCD_RS08915 PF13167 GTP-binding GTPase N-terminal SCD_RS08915 PF01926 50S ribosome-binding GTPase SCD_RS08920 PF17209 Hfq protein SCD_RS08935 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SCD_RS08935 PF01926 50S ribosome-binding GTPase SCD_RS08940 PF13360 PQQ-like domain SCD_RS08945 PF09976 Tetratricopeptide repeat-like domain SCD_RS08950 PF03129 Anticodon binding domain SCD_RS08950 PF13393 Histidyl-tRNA synthetase SCD_RS08955 PF04551 GcpE protein SCD_RS08960 PF13464 Domain of unknown function (DUF4115) SCD_RS08970 PF04055 Radical SAM superfamily SCD_RS08975 PF00334 Nucleoside diphosphate kinase SCD_RS08995 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SCD_RS09000 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component SCD_RS09005 PF03480 Bacterial extracellular solute-binding protein, family 7 SCD_RS09010 PF11734 TilS substrate C-terminal domain SCD_RS09010 PF01171 PP-loop family SCD_RS09010 PF09179 TilS substrate binding domain SCD_RS09015 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SCD_RS09020 PF02272 DHHA1 domain SCD_RS09020 PF17768 RecJ OB domain SCD_RS09020 PF01368 DHH family SCD_RS09035 PF00472 RF-1 domain SCD_RS09035 PF03462 PCRF domain SCD_RS09045 PF01336 OB-fold nucleic acid binding domain SCD_RS09045 PF00152 tRNA synthetases class II (D, K and N) SCD_RS09055 PF00403 Heavy-metal-associated domain SCD_RS09080 PF00486 Transcriptional regulatory protein, C terminal SCD_RS09080 PF00072 Response regulator receiver domain SCD_RS09085 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS09085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS09085 PF00672 HAMP domain SCD_RS09110 PF18693 TRAM domain SCD_RS09110 PF04055 Radical SAM superfamily SCD_RS09110 PF00919 Uncharacterized protein family UPF0004 SCD_RS09120 PF02578 Multi-copper polyphenol oxidoreductase laccase SCD_RS09125 PF00849 RNA pseudouridylate synthase SCD_RS09130 PF13525 Outer membrane lipoprotein SCD_RS09135 PF00543 Nitrogen regulatory protein P-II SCD_RS09140 PF02540 NAD synthase SCD_RS09140 PF00795 Carbon-nitrogen hydrolase SCD_RS09145 PF00549 CoA-ligase SCD_RS09145 PF02629 CoA binding domain SCD_RS09150 PF08442 ATP-grasp domain SCD_RS09150 PF00549 CoA-ligase SCD_RS09155 PF08668 HDOD domain SCD_RS09155 PF00563 EAL domain SCD_RS09175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SCD_RS09185 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SCD_RS09195 PF03588 Leucyl/phenylalanyl-tRNA protein transferase SCD_RS09200 PF04377 Arginine-tRNA-protein transferase, C terminus SCD_RS09200 PF04376 Arginine-tRNA-protein transferase, N terminus SCD_RS09210 PF00072 Response regulator receiver domain SCD_RS09215 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS09215 PF00563 EAL domain SCD_RS09215 PF03707 Bacterial signalling protein N terminal repeat SCD_RS09220 PF00303 Thymidylate synthase SCD_RS09225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SCD_RS09225 PF00672 HAMP domain SCD_RS09230 PF00186 Dihydrofolate reductase SCD_RS09240 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SCD_RS09240 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SCD_RS09240 PF01276 Orn/Lys/Arg decarboxylase, major domain SCD_RS09245 PF00692 dUTPase SCD_RS09250 PF10609 NUBPL iron-transfer P-loop NTPase SCD_RS09255 PF01588 Putative tRNA binding domain SCD_RS09255 PF09334 tRNA synthetases class I (M) SCD_RS09265 PF00708 Acylphosphatase SCD_RS09275 PF07733 Bacterial DNA polymerase III alpha NTPase domain SCD_RS09275 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SCD_RS09275 PF02811 PHP domain SCD_RS09275 PF14579 Helix-hairpin-helix motif SCD_RS09275 PF01336 OB-fold nucleic acid binding domain SCD_RS09280 PF16325 Peptidase family U32 C-terminal domain SCD_RS09280 PF01136 Peptidase family U32 SCD_RS09285 PF11871 Domain of unknown function (DUF3391) SCD_RS09285 PF01966 HD domain SCD_RS09290 PF00909 Ammonium Transporter Family SCD_RS09305 PF02754 Cysteine-rich domain SCD_RS09310 PF13085 2Fe-2S iron-sulfur cluster binding domain SCD_RS09310 PF13183 4Fe-4S dicluster domain SCD_RS09320 PF01593 Flavin containing amine oxidoreductase SCD_RS09330 PF00719 Inorganic pyrophosphatase SCD_RS09335 PF03030 Inorganic H+ pyrophosphatase SCD_RS09340 PF00365 Phosphofructokinase SCD_RS09350 PF05191 Adenylate kinase, active site lid SCD_RS09355 PF02348 Cytidylyltransferase SCD_RS09360 PF03966 Trm112p-like protein SCD_RS09365 PF02606 Tetraacyldisaccharide-1-P 4'-kinase SCD_RS09370 PF02472 Biopolymer transport protein ExbD/TolR SCD_RS09375 PF01618 MotA/TolQ/ExbB proton channel family SCD_RS09380 PF13742 OB-fold nucleic acid binding domain SCD_RS09380 PF02601 Exonuclease VII, large subunit SCD_RS09400 PF08676 MutL C terminal dimerisation domain SCD_RS09400 PF01119 DNA mismatch repair protein, C-terminal domain SCD_RS09410 PF13439 Glycosyltransferase Family 4 SCD_RS09410 PF00534 Glycosyl transferases group 1 SCD_RS09420 PF01520 N-acetylmuramoyl-L-alanine amidase SCD_RS09420 PF11741 AMIN domain SCD_RS09425 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SCD_RS09430 PF08331 Domain of unknown function (DUF1730) SCD_RS09440 PF01177 Asp/Glu/Hydantoin racemase SCD_RS09450 PF00175 Oxidoreductase NAD-binding domain SCD_RS09450 PF00111 2Fe-2S iron-sulfur cluster binding domain SCD_RS09450 PF00970 Oxidoreductase FAD-binding domain SCD_RS09460 PF02607 B12 binding domain SCD_RS09460 PF02310 B12 binding domain SCD_RS09475 PF00873 AcrB/AcrD/AcrF family SCD_RS09495 PF02630 SCO1/SenC SCD_RS09510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SCD_RS09515 PF09094 Domain of unknown function (DUF1925) SCD_RS09515 PF09095 Domain of unknown function (DUF1926) SCD_RS09515 PF03065 Glycosyl hydrolase family 57 SCD_RS09525 PF00483 Nucleotidyl transferase SCD_RS09530 PF00128 Alpha amylase, catalytic domain SCD_RS09530 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SCD_RS09530 PF02806 Alpha amylase, C-terminal all-beta domain SCD_RS09535 PF00342 Phosphoglucose isomerase SCD_RS09545 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SCD_RS09555 PF04542 Sigma-70 region 2 SCD_RS09555 PF08281 Sigma-70, region 4 SCD_RS09570 PF00534 Glycosyl transferases group 1 SCD_RS09570 PF08323 Starch synthase catalytic domain SCD_RS09575 PF11897 Protein of unknown function (DUF3417) SCD_RS09575 PF00343 Carbohydrate phosphorylase SCD_RS09580 PF00929 Exonuclease SCD_RS09585 PF01435 Peptidase family M48 SCD_RS09595 PF01329 Pterin 4 alpha carbinolamine dehydratase SCD_RS09600 PF03193 RsgA GTPase SCD_RS09615 PF00850 Histone deacetylase domain SCD_RS09620 PF00583 Acetyltransferase (GNAT) family SCD_RS09620 PF13607 Succinyl-CoA ligase like flavodoxin domain SCD_RS09620 PF13380 CoA binding domain SCD_RS09640 PF01523 Putative modulator of DNA gyrase SCD_RS09645 PF00795 Carbon-nitrogen hydrolase SCD_RS09655 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SCD_RS09655 PF00437 Type II/IV secretion system protein SCD_RS09660 PF04358 DsrC like protein SCD_RS09685 PF16177 Acetyl-coenzyme A synthetase N-terminus SCD_RS09685 PF13193 AMP-binding enzyme C-terminal domain SCD_RS09685 PF00501 AMP-binding enzyme SCD_RS09690 PF03710 Glutamate-ammonia ligase adenylyltransferase SCD_RS09690 PF08335 GlnD PII-uridylyltransferase SCD_RS09695 PF01063 Amino-transferase class IV SCD_RS09705 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SCD_RS09720 PF04055 Radical SAM superfamily SCD_RS09720 PF06969 HemN C-terminal domain SCD_RS09725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SCD_RS09725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SCD_RS09725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SCD_RS09725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SCD_RS09740 PF02508 Rnf-Nqr subunit, membrane protein SCD_RS09745 PF04060 Putative Fe-S cluster SCD_RS09750 PF13375 RnfC Barrel sandwich hybrid domain SCD_RS09750 PF10531 SLBB domain SCD_RS09750 PF13237 4Fe-4S dicluster domain SCD_RS09750 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SCD_RS09755 PF03116 NQR2, RnfD, RnfE family SCD_RS09760 PF04205 FMN-binding domain SCD_RS09765 PF02508 Rnf-Nqr subunit, membrane protein SCD_RS09770 PF03658 RnfH family Ubiquitin SCD_RS09780 PF01180 Dihydroorotate dehydrogenase SCD_RS09785 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SCD_RS09785 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SCD_RS09790 PF02508 Rnf-Nqr subunit, membrane protein SCD_RS09795 PF04060 Putative Fe-S cluster SCD_RS09800 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SCD_RS09800 PF13237 4Fe-4S dicluster domain SCD_RS09800 PF13375 RnfC Barrel sandwich hybrid domain SCD_RS09800 PF10531 SLBB domain SCD_RS09805 PF03116 NQR2, RnfD, RnfE family SCD_RS09810 PF04205 FMN-binding domain SCD_RS09815 PF02508 Rnf-Nqr subunit, membrane protein SCD_RS09830 PF00633 Helix-hairpin-helix motif SCD_RS09830 PF10576 Iron-sulfur binding domain of endonuclease III SCD_RS09830 PF00730 HhH-GPD superfamily base excision DNA repair protein SCD_RS09835 PF08495 FIST N domain SCD_RS09835 PF10442 FIST C domain SCD_RS09850 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding SCD_RS09850 PF18381 YcaO cyclodehydratase C-terminal domain SCD_RS09860 PF00483 Nucleotidyl transferase SCD_RS09875 PF06628 Catalase-related immune-responsive SCD_RS09875 PF00199 Catalase SCD_RS09880 PF00581 Rhodanese-like domain SCD_RS09885 PF03741 Integral membrane protein TerC family SCD_RS09895 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SCD_RS09895 PF00361 Proton-conducting membrane transporter SCD_RS09895 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter SCD_RS09895 PF13244 Domain of unknown function (DUF4040) SCD_RS09900 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SCD_RS09905 PF00361 Proton-conducting membrane transporter SCD_RS09910 PF01899 Na+/H+ ion antiporter subunit SCD_RS09915 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) SCD_RS09920 PF03334 Na+/H+ antiporter subunit SCD_RS09925 PF02690 Na+/Pi-cotransporter SCD_RS09935 PF03595 Voltage-dependent anion channel SCD_RS09940 PF00582 Universal stress protein family SCD_RS09955 PF09828 Chromate resistance exported protein SCD_RS09970 PF09828 Chromate resistance exported protein SCD_RS09975 PF00916 Sulfate permease family SCD_RS09975 PF01740 STAS domain SCD_RS09985 PF00582 Universal stress protein family SCD_RS09995 PF00916 Sulfate permease family SCD_RS09995 PF01740 STAS domain SCD_RS10000 PF00361 Proton-conducting membrane transporter SCD_RS10005 PF00146 NADH dehydrogenase SCD_RS10015 PF00361 Proton-conducting membrane transporter SCD_RS10020 PF00374 Nickel-dependent hydrogenase SCD_RS10020 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SCD_RS10020 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SCD_RS10025 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SCD_RS10040 PF03466 LysR substrate binding domain SCD_RS10040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SCD_RS10045 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain SCD_RS10045 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain SCD_RS10050 PF00101 Ribulose bisphosphate carboxylase, small chain SCD_RS10055 PF08406 CbbQ/NirQ/NorQ C-terminal SCD_RS10055 PF07728 AAA domain (dynein-related subfamily) SCD_RS10060 PF00092 von Willebrand factor type A domain SCD_RS10080 PF01116 Fructose-bisphosphate aldolase class-II SCD_RS10085 PF00311 Phosphoenolpyruvate carboxylase SCD_RS10090 PF00731 AIR carboxylase SCD_RS10095 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SCD_RS10095 PF02222 ATP-grasp domain SCD_RS10100 PF01259 SAICAR synthetase SCD_RS10105 PF00484 Carbonic anhydrase SCD_RS10110 PF01923 Cobalamin adenosyltransferase SCD_RS10115 PF01497 Periplasmic binding protein SCD_RS10125 PF03186 CobD/Cbib protein SCD_RS10125 PF17113 Regulatory signalling modulator protein AmpE SCD_RS10145 PF13426 PAS domain SCD_RS10145 PF00672 HAMP domain SCD_RS10145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SCD_RS10160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS10160 PF08521 Two-component sensor kinase N-terminal SCD_RS10160 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS10165 PF00486 Transcriptional regulatory protein, C terminal SCD_RS10165 PF00072 Response regulator receiver domain SCD_RS10170 PF01479 S4 domain SCD_RS10170 PF00849 RNA pseudouridylate synthase SCD_RS10175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SCD_RS10180 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS10180 PF00072 Response regulator receiver domain SCD_RS10190 PF00111 2Fe-2S iron-sulfur cluster binding domain SCD_RS10190 PF00175 Oxidoreductase NAD-binding domain SCD_RS10190 PF00970 Oxidoreductase FAD-binding domain SCD_RS10200 PF04358 DsrC like protein SCD_RS10225 PF01337 Barstar (barnase inhibitor) SCD_RS10230 PF00545 ribonuclease SCD_RS10235 PF17785 PUA-like domain SCD_RS10235 PF10672 S-adenosylmethionine-dependent methyltransferase SCD_RS10240 PF01209 ubiE/COQ5 methyltransferase family SCD_RS10245 PF00753 Metallo-beta-lactamase superfamily SCD_RS10250 PF18389 TrmO C-terminal domain SCD_RS10250 PF01980 tRNA-methyltransferase O SCD_RS10260 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SCD_RS10260 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SCD_RS10265 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SCD_RS10265 PF00672 HAMP domain SCD_RS10265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS10265 PF00072 Response regulator receiver domain SCD_RS10265 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS10265 PF01627 Hpt domain SCD_RS10275 PF00593 TonB dependent receptor SCD_RS10275 PF07715 TonB-dependent Receptor Plug Domain SCD_RS10280 PF00593 TonB dependent receptor SCD_RS10280 PF07715 TonB-dependent Receptor Plug Domain SCD_RS10325 PF00268 Ribonucleotide reductase, small chain SCD_RS10330 PF00317 Ribonucleotide reductase, all-alpha domain SCD_RS10330 PF02867 Ribonucleotide reductase, barrel domain SCD_RS10330 PF03477 ATP cone domain SCD_RS10340 PF07486 Cell Wall Hydrolase SCD_RS10340 PF01471 Putative peptidoglycan binding domain SCD_RS10355 PF01842 ACT domain SCD_RS10355 PF00551 Formyl transferase SCD_RS10360 PF04193 PQ loop repeat SCD_RS10375 PF01510 N-acetylmuramoyl-L-alanine amidase SCD_RS10390 PF00343 Carbohydrate phosphorylase SCD_RS10395 PF02954 Bacterial regulatory protein, Fis family SCD_RS10395 PF00158 Sigma-54 interaction domain SCD_RS10395 PF00072 Response regulator receiver domain SCD_RS10400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS10400 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS10415 PF00348 Polyprenyl synthetase SCD_RS10420 PF00829 Ribosomal prokaryotic L21 protein SCD_RS10425 PF01016 Ribosomal L27 protein SCD_RS10430 PF01926 50S ribosome-binding GTPase SCD_RS10430 PF01018 GTP1/OBG SCD_RS10435 PF01472 PUA domain SCD_RS10435 PF00696 Amino acid kinase family SCD_RS10445 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SCD_RS10455 PF00293 NUDIX domain SCD_RS10475 PF05957 Bacterial protein of unknown function (DUF883) SCD_RS10480 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SCD_RS10480 PF04073 Aminoacyl-tRNA editing domain SCD_RS10480 PF03129 Anticodon binding domain SCD_RS10485 PF01464 Transglycosylase SLT domain SCD_RS10485 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain SCD_RS10495 PF01475 Ferric uptake regulator family SCD_RS10500 PF01266 FAD dependent oxidoreductase SCD_RS10505 PF00114 Pilin (bacterial filament) SCD_RS10505 PF07963 Prokaryotic N-terminal methylation motif SCD_RS10510 PF00114 Pilin (bacterial filament) SCD_RS10510 PF07963 Prokaryotic N-terminal methylation motif SCD_RS10535 PF02401 LytB protein SCD_RS10540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SCD_RS10545 PF01252 Signal peptidase (SPase) II SCD_RS10550 PF08264 Anticodon-binding domain of tRNA SCD_RS10550 PF00133 tRNA synthetases class I (I, L, M and V) SCD_RS10550 PF06827 Zinc finger found in FPG and IleRS SCD_RS10555 PF01687 Riboflavin kinase SCD_RS10555 PF06574 FAD synthetase SCD_RS10560 PF03023 Lipid II flippase MurJ SCD_RS10565 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SCD_RS10565 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SCD_RS10580 PF03190 Protein of unknown function, DUF255 SCD_RS10585 PF01207 Dihydrouridine synthase (Dus) SCD_RS10590 PF01435 Peptidase family M48 SCD_RS10600 PF01027 Inhibitor of apoptosis-promoting Bax1 SCD_RS10605 PF03466 LysR substrate binding domain SCD_RS10605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SCD_RS10610 PF01545 Cation efflux family SCD_RS10635 PF01451 Low molecular weight phosphotyrosine protein phosphatase SCD_RS10655 PF13847 Methyltransferase domain SCD_RS10670 PF01758 Sodium Bile acid symporter family SCD_RS10675 PF01022 Bacterial regulatory protein, arsR family SCD_RS10685 PF01292 Prokaryotic cytochrome b561 SCD_RS10695 PF04264 YceI-like domain SCD_RS10705 PF18113 Rubredoxin binding C-terminal domain SCD_RS10705 PF07992 Pyridine nucleotide-disulphide oxidoreductase SCD_RS10710 PF00301 Rubredoxin SCD_RS10720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SCD_RS10720 PF03466 LysR substrate binding domain SCD_RS10745 PF01556 DnaJ C terminal domain SCD_RS10745 PF00226 DnaJ domain SCD_RS10755 PF01161 Phosphatidylethanolamine-binding protein SCD_RS10760 PF01253 Translation initiation factor SUI1 SCD_RS10770 PF00005 ABC transporter SCD_RS10770 PF00664 ABC transporter transmembrane region SCD_RS10785 PF00313 'Cold-shock' DNA-binding domain SCD_RS10800 PF01649 Ribosomal protein S20 SCD_RS10805 PF00202 Aminotransferase class-III SCD_RS10810 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SCD_RS10810 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SCD_RS10815 PF00764 Arginosuccinate synthase SCD_RS10820 PF06865 Pyrimidine/purine nucleoside phosphorylase SCD_RS10825 PF04461 Protein of unknown function (DUF520) SCD_RS10830 PF00175 Oxidoreductase NAD-binding domain SCD_RS10830 PF00970 Oxidoreductase FAD-binding domain SCD_RS10830 PF00111 2Fe-2S iron-sulfur cluster binding domain SCD_RS10835 PF00958 GMP synthase C terminal domain SCD_RS10835 PF00117 Glutamine amidotransferase class-I SCD_RS10850 PF02649 Type I GTP cyclohydrolase folE2 SCD_RS10855 PF02779 Transketolase, pyrimidine binding domain SCD_RS10855 PF02780 Transketolase, C-terminal domain SCD_RS10855 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SCD_RS10860 PF00348 Polyprenyl synthetase SCD_RS10865 PF02609 Exonuclease VII small subunit SCD_RS10870 PF00892 EamA-like transporter family SCD_RS10885 PF01471 Putative peptidoglycan binding domain SCD_RS10885 PF13401 AAA domain SCD_RS10895 PF04493 Endonuclease V SCD_RS10900 PF08328 Adenylosuccinate lyase C-terminal SCD_RS10900 PF00206 Lyase SCD_RS10910 PF09335 SNARE associated Golgi protein SCD_RS10915 PF02355 Protein export membrane protein SCD_RS10915 PF07549 SecD/SecF GG Motif SCD_RS10920 PF07549 SecD/SecF GG Motif SCD_RS10920 PF13721 SecD export protein N-terminal TM region SCD_RS10920 PF02355 Protein export membrane protein SCD_RS10925 PF02699 Preprotein translocase subunit SCD_RS10930 PF01702 Queuine tRNA-ribosyltransferase SCD_RS10935 PF16200 C-terminal region of band_7 SCD_RS10935 PF01145 SPFH domain / Band 7 family SCD_RS10945 PF02547 Queuosine biosynthesis protein SCD_RS10955 PF02261 Aspartate decarboxylase SCD_RS10960 PF02569 Pantoate-beta-alanine ligase SCD_RS10965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SCD_RS10965 PF08447 PAS fold SCD_RS10965 PF13426 PAS domain SCD_RS10970 PF02548 Ketopantoate hydroxymethyltransferase SCD_RS10980 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SCD_RS10985 PF01743 Poly A polymerase head domain SCD_RS10985 PF12626 Polymerase A arginine-rich C-terminus SCD_RS10985 PF12627 Probable RNA and SrmB- binding site of polymerase A SCD_RS10990 PF00753 Metallo-beta-lactamase superfamily SCD_RS10995 PF00005 ABC transporter SCD_RS11000 PF01032 FecCD transport family SCD_RS11020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SCD_RS11020 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SCD_RS11020 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SCD_RS11020 PF10371 Domain of unknown function SCD_RS11020 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SCD_RS11025 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold SCD_RS11025 PF00270 DEAD/DEAH box helicase SCD_RS11025 PF11898 Domain of unknown function (DUF3418) SCD_RS11025 PF04408 Helicase associated domain (HA2) SCD_RS11025 PF00271 Helicase conserved C-terminal domain SCD_RS11035 PF00037 4Fe-4S binding domain SCD_RS11035 PF11953 Domain of unknown function (DUF3470) SCD_RS11040 PF01738 Dienelactone hydrolase family SCD_RS11055 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 SCD_RS11060 PF08240 Alcohol dehydrogenase GroES-like domain SCD_RS11060 PF00107 Zinc-binding dehydrogenase SCD_RS11065 PF00756 Putative esterase SCD_RS11075 PF04945 YHS domain SCD_RS11080 PF00672 HAMP domain SCD_RS11080 PF01966 HD domain SCD_RS11125 PF05275 Copper resistance protein B precursor (CopB) SCD_RS11130 PF00394 Multicopper oxidase SCD_RS11130 PF07732 Multicopper oxidase SCD_RS11130 PF07731 Multicopper oxidase SCD_RS11140 PF00486 Transcriptional regulatory protein, C terminal SCD_RS11140 PF00072 Response regulator receiver domain SCD_RS11145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS11145 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS11145 PF00672 HAMP domain SCD_RS11155 PF01209 ubiE/COQ5 methyltransferase family SCD_RS11165 PF00899 ThiF family SCD_RS11165 PF00581 Rhodanese-like domain SCD_RS11175 PF08376 Nitrate and nitrite sensing SCD_RS11175 PF03861 ANTAR domain SCD_RS11185 PF00042 Globin SCD_RS11185 PF00175 Oxidoreductase NAD-binding domain SCD_RS11185 PF00970 Oxidoreductase FAD-binding domain SCD_RS11190 PF00528 Binding-protein-dependent transport system inner membrane component SCD_RS11195 PF00005 ABC transporter SCD_RS11200 PF04324 BFD-like [2Fe-2S] binding domain SCD_RS11200 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SCD_RS11200 PF07992 Pyridine nucleotide-disulphide oxidoreductase SCD_RS11200 PF18267 Rubredoxin NAD+ reductase C-terminal domain SCD_RS11200 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SCD_RS11210 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SCD_RS11210 PF00384 Molybdopterin oxidoreductase SCD_RS11210 PF01568 Molydopterin dinucleotide binding domain SCD_RS11215 PF12800 4Fe-4S binding domain SCD_RS11215 PF09163 Formate dehydrogenase N, transmembrane SCD_RS11215 PF13247 4Fe-4S dicluster domain SCD_RS11230 PF00069 Protein kinase domain SCD_RS11230 PF03793 PASTA domain SCD_RS11235 PF07690 Major Facilitator Superfamily SCD_RS11245 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) SCD_RS11255 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SCD_RS11255 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SCD_RS11260 PF00849 RNA pseudouridylate synthase SCD_RS11260 PF01479 S4 domain SCD_RS11290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS11290 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS11290 PF13426 PAS domain SCD_RS11290 PF00989 PAS fold SCD_RS11290 PF13188 PAS domain SCD_RS11310 PF00072 Response regulator receiver domain SCD_RS11310 PF00158 Sigma-54 interaction domain SCD_RS11310 PF02954 Bacterial regulatory protein, Fis family SCD_RS11315 PF08668 HDOD domain SCD_RS11320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS11320 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS11325 PF00196 Bacterial regulatory proteins, luxR family SCD_RS11325 PF00072 Response regulator receiver domain SCD_RS11350 PF00072 Response regulator receiver domain SCD_RS11355 PF00158 Sigma-54 interaction domain SCD_RS11355 PF00072 Response regulator receiver domain SCD_RS11360 PF00025 ADP-ribosylation factor family SCD_RS11365 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS11365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS11370 PF00437 Type II/IV secretion system protein SCD_RS11370 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SCD_RS11390 PF00155 Aminotransferase class I and II SCD_RS11395 PF00873 AcrB/AcrD/AcrF family SCD_RS11410 PF00072 Response regulator receiver domain SCD_RS11410 PF00486 Transcriptional regulatory protein, C terminal SCD_RS11415 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS11415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS11420 PF04055 Radical SAM superfamily SCD_RS11420 PF08497 Radical SAM N-terminal SCD_RS11420 PF11842 Domain of unknown function (DUF3362) SCD_RS11435 PF16658 Class II release factor RF3, C-terminal domain SCD_RS11435 PF03144 Elongation factor Tu domain 2 SCD_RS11435 PF00009 Elongation factor Tu GTP binding domain SCD_RS11445 PF01479 S4 domain SCD_RS11450 PF08668 HDOD domain SCD_RS11450 PF00563 EAL domain SCD_RS11455 PF03707 Bacterial signalling protein N terminal repeat SCD_RS11455 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS11455 PF00563 EAL domain SCD_RS11465 PF01430 Hsp33 protein SCD_RS11485 PF00158 Sigma-54 interaction domain SCD_RS11485 PF02954 Bacterial regulatory protein, Fis family SCD_RS11485 PF00072 Response regulator receiver domain SCD_RS11495 PF00672 HAMP domain SCD_RS11495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SCD_RS11495 PF17200 Single Cache domain 2 SCD_RS11500 PF00749 tRNA synthetases class I (E and Q), catalytic domain SCD_RS11505 PF02678 Pirin SCD_RS11505 PF17954 Quercetinase C-terminal cupin domain SCD_RS11510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SCD_RS11520 PF00472 RF-1 domain SCD_RS11540 PF01370 NAD dependent epimerase/dehydratase family SCD_RS11545 PF00535 Glycosyl transferase family 2 SCD_RS11560 PF01435 Peptidase family M48 SCD_RS11565 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SCD_RS11570 PF00005 ABC transporter SCD_RS11570 PF00664 ABC transporter transmembrane region SCD_RS11615 PF01272 Transcription elongation factor, GreA/GreB, C-term SCD_RS11615 PF03449 Transcription elongation factor, N-terminal SCD_RS11625 PF00085 Thioredoxin SCD_RS11635 PF08299 Bacterial dnaA protein helix-turn-helix SCD_RS11635 PF11638 DnaA N-terminal domain SCD_RS11635 PF00308 Bacterial dnaA protein SCD_RS11645 PF00313 'Cold-shock' DNA-binding domain SCD_RS11650 PF01594 AI-2E family transporter SCD_RS11655 PF02769 AIR synthase related protein, C-terminal domain SCD_RS11655 PF00586 AIR synthase related protein, N-terminal domain SCD_RS11660 PF00551 Formyl transferase SCD_RS11675 PF01029 NusB family SCD_RS11675 PF01189 16S rRNA methyltransferase RsmB/F SCD_RS11680 PF03707 Bacterial signalling protein N terminal repeat SCD_RS11680 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS11680 PF00563 EAL domain SCD_RS11700 PF04381 Putative exonuclease, RdgC SCD_RS11705 PF04305 Protein of unknown function (DUF455) SCD_RS11710 PF01863 Protein of unknown function DUF45 SCD_RS11715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SCD_RS11715 PF00205 Thiamine pyrophosphate enzyme, central domain SCD_RS11715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SCD_RS11755 PF01625 Peptide methionine sulfoxide reductase SCD_RS11760 PF13091 PLD-like domain SCD_RS11765 PF03976 Polyphosphate kinase 2 (PPK2) SCD_RS11770 PF01928 CYTH domain SCD_RS11795 PF16697 Inner membrane component of T3SS, cytoplasmic domain SCD_RS11805 PF00114 Pilin (bacterial filament) SCD_RS11805 PF07963 Prokaryotic N-terminal methylation motif SCD_RS11815 PF00535 Glycosyl transferase family 2 SCD_RS11820 PF13439 Glycosyltransferase Family 4 SCD_RS11825 PF16363 GDP-mannose 4,6 dehydratase SCD_RS11835 PF00535 Glycosyl transferase family 2 SCD_RS11840 PF00535 Glycosyl transferase family 2 SCD_RS11875 PF00005 ABC transporter SCD_RS11890 PF02687 FtsX-like permease family SCD_RS11890 PF00005 ABC transporter SCD_RS11890 PF12704 MacB-like periplasmic core domain SCD_RS11895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SCD_RS11900 PF00149 Calcineurin-like phosphoesterase SCD_RS11900 PF02872 5'-nucleotidase, C-terminal domain SCD_RS11930 PF03881 Fructosamine kinase SCD_RS11940 PF02696 Uncharacterized ACR, YdiU/UPF0061 family SCD_RS11965 PF14403 Circularly permuted ATP-grasp type 2 SCD_RS11970 PF04168 A predicted alpha-helical domain with a conserved ER motif. SCD_RS11970 PF14403 Circularly permuted ATP-grasp type 2 SCD_RS11990 PF02806 Alpha amylase, C-terminal all-beta domain SCD_RS11990 PF00128 Alpha amylase, catalytic domain SCD_RS11990 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SCD_RS11995 PF00128 Alpha amylase, catalytic domain SCD_RS11995 PF11896 Domain of unknown function (DUF3416) SCD_RS12000 PF16657 Maltogenic Amylase, C-terminal domain SCD_RS12000 PF00128 Alpha amylase, catalytic domain SCD_RS12010 PF00128 Alpha amylase, catalytic domain SCD_RS12010 PF16657 Maltogenic Amylase, C-terminal domain SCD_RS12015 PF00483 Nucleotidyl transferase SCD_RS12020 PF00128 Alpha amylase, catalytic domain SCD_RS12020 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SCD_RS12025 PF00128 Alpha amylase, catalytic domain SCD_RS12025 PF11941 Domain of unknown function (DUF3459) SCD_RS12025 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SCD_RS12030 PF02446 4-alpha-glucanotransferase SCD_RS12035 PF03631 Virulence factor BrkB SCD_RS12040 PF07694 5TMR of 5TMR-LYT SCD_RS12040 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS12050 PF02470 MlaD protein SCD_RS12055 PF04403 Paraquat-inducible protein A SCD_RS12060 PF04403 Paraquat-inducible protein A SCD_RS12085 PF01741 Large-conductance mechanosensitive channel, MscL SCD_RS12095 PF04546 Sigma-70, non-essential region SCD_RS12095 PF04545 Sigma-70, region 4 SCD_RS12095 PF00140 Sigma-70 factor, region 1.2 SCD_RS12095 PF04542 Sigma-70 region 2 SCD_RS12095 PF04539 Sigma-70 region 3 SCD_RS12095 PF03979 Sigma-70 factor, region 1.1 SCD_RS12100 PF01807 CHC2 zinc finger SCD_RS12100 PF08278 DNA primase DnaG DnaB-binding SCD_RS12100 PF10410 DnaB-helicase binding domain of primase SCD_RS12100 PF08275 DNA primase catalytic core, N-terminal domain SCD_RS12110 PF01165 Ribosomal protein S21 SCD_RS12115 PF00814 Glycoprotease family SCD_RS12125 PF02660 Glycerol-3-phosphate acyltransferase SCD_RS12140 PF00589 Phage integrase family SCD_RS12140 PF02899 Phage integrase, N-terminal SAM-like domain SCD_RS12145 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SCD_RS12145 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SCD_RS12150 PF01245 Ribosomal protein L19 SCD_RS12155 PF01746 tRNA (Guanine-1)-methyltransferase SCD_RS12160 PF05239 PRC-barrel domain SCD_RS12160 PF01782 RimM N-terminal domain SCD_RS12165 PF00886 Ribosomal protein S16 SCD_RS12170 PF02881 SRP54-type protein, helical bundle domain SCD_RS12170 PF02978 Signal peptide binding domain SCD_RS12170 PF00448 SRP54-type protein, GTPase domain SCD_RS12175 PF01578 Cytochrome C assembly protein SCD_RS12180 PF01595 Cyclin M transmembrane N-terminal domain SCD_RS12180 PF03471 Transporter associated domain SCD_RS12180 PF00571 CBS domain SCD_RS12185 PF00437 Type II/IV secretion system protein SCD_RS12185 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SCD_RS12190 PF00482 Type II secretion system (T2SS), protein F SCD_RS12195 PF01478 Type IV leader peptidase family SCD_RS12195 PF06750 Bacterial Peptidase A24 N-terminal domain SCD_RS12200 PF01121 Dephospho-CoA kinase SCD_RS12205 PF07072 Cell division protein SCD_RS12215 PF00293 NUDIX domain SCD_RS12220 PF01960 ArgJ family SCD_RS12230 PF07517 SecA DEAD-like domain SCD_RS12230 PF01043 SecA preprotein cross-linking domain SCD_RS12230 PF07516 SecA Wing and Scaffold domain SCD_RS12230 PF02810 SEC-C motif SCD_RS12235 PF08525 Opacity-associated protein A N-terminal motif SCD_RS12235 PF01476 LysM domain SCD_RS12235 PF01551 Peptidase family M23 SCD_RS12250 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase SCD_RS12255 PF00091 Tubulin/FtsZ family, GTPase domain SCD_RS12255 PF12327 FtsZ family, C-terminal domain SCD_RS12260 PF02491 SHS2 domain inserted in FTSA SCD_RS12265 PF08478 POTRA domain, FtsQ-type SCD_RS12265 PF03799 Cell division protein FtsQ SCD_RS12270 PF01820 D-ala D-ala ligase N-terminus SCD_RS12270 PF07478 D-ala D-ala ligase C-terminus SCD_RS12275 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SCD_RS12275 PF01565 FAD binding domain SCD_RS12280 PF01225 Mur ligase family, catalytic domain SCD_RS12280 PF08245 Mur ligase middle domain SCD_RS12280 PF02875 Mur ligase family, glutamate ligase domain SCD_RS12285 PF03033 Glycosyltransferase family 28 N-terminal domain SCD_RS12285 PF04101 Glycosyltransferase family 28 C-terminal domain SCD_RS12290 PF01098 Cell cycle protein SCD_RS12295 PF08245 Mur ligase middle domain SCD_RS12295 PF02875 Mur ligase family, glutamate ligase domain SCD_RS12300 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SCD_RS12300 PF00953 Glycosyl transferase family 4 SCD_RS12305 PF08245 Mur ligase middle domain SCD_RS12305 PF01225 Mur ligase family, catalytic domain SCD_RS12305 PF02875 Mur ligase family, glutamate ligase domain SCD_RS12310 PF01225 Mur ligase family, catalytic domain SCD_RS12310 PF08245 Mur ligase middle domain SCD_RS12310 PF02875 Mur ligase family, glutamate ligase domain SCD_RS12315 PF00905 Penicillin binding protein transpeptidase domain SCD_RS12315 PF03717 Penicillin-binding Protein dimerisation domain SCD_RS12320 PF04999 Cell division protein FtsL SCD_RS12325 PF01795 MraW methylase family SCD_RS12330 PF02381 MraZ protein, putative antitoxin-like SCD_RS12340 PF01979 Amidohydrolase family SCD_RS12345 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SCD_RS12345 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP SCD_RS12355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SCD_RS12360 PF04348 LppC putative lipoprotein SCD_RS12365 PF02021 Uncharacterised protein family UPF0102 SCD_RS12370 PF13580 SIS domain SCD_RS12375 PF04972 BON domain SCD_RS12380 PF01467 Cytidylyltransferase-like SCD_RS12385 PF02913 FAD linked oxidases, C-terminal domain SCD_RS12385 PF01565 FAD binding domain SCD_RS12395 PF03309 Type III pantothenate kinase SCD_RS12400 PF03099 Biotin/lipoate A/B protein ligase family SCD_RS12400 PF02237 Biotin protein ligase C terminal domain SCD_RS12430 PF00579 tRNA synthetases class I (W and Y) SCD_RS12430 PF01479 S4 domain SCD_RS12440 PF03702 Anhydro-N-acetylmuramic acid kinase SCD_RS12445 PF01521 Iron-sulphur cluster biosynthesis SCD_RS12460 PF01118 Semialdehyde dehydrogenase, NAD binding domain SCD_RS12460 PF02774 Semialdehyde dehydrogenase, dimerisation domain SCD_RS12465 PF00380 Ribosomal protein S9/S16 SCD_RS12470 PF00572 Ribosomal protein L13 SCD_RS12480 PF03232 Ubiquinone biosynthesis protein COQ7 SCD_RS12490 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system SCD_RS12495 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SCD_RS12500 PF13609 Gram-negative porin SCD_RS12505 PF00218 Indole-3-glycerol phosphate synthase SCD_RS12510 PF02885 Glycosyl transferase family, helical bundle domain SCD_RS12510 PF00591 Glycosyl transferase family, a/b domain SCD_RS12515 PF04480 Protein of unknown function (DUF559) SCD_RS12520 PF00117 Glutamine amidotransferase class-I SCD_RS12525 PF00425 chorismate binding enzyme SCD_RS12525 PF04715 Anthranilate synthase component I, N terminal region SCD_RS12530 PF13419 Haloacid dehalogenase-like hydrolase SCD_RS12535 PF00834 Ribulose-phosphate 3 epimerase family SCD_RS12540 PF04379 ApaG domain SCD_RS12545 PF03562 MltA specific insert domain SCD_RS12545 PF06725 3D domain SCD_RS12560 PF02472 Biopolymer transport protein ExbD/TolR SCD_RS12565 PF01618 MotA/TolQ/ExbB proton channel family SCD_RS12570 PF03544 Gram-negative bacterial TonB protein C-terminal SCD_RS12580 PF12801 4Fe-4S binding domain SCD_RS12580 PF04205 FMN-binding domain SCD_RS12590 PF00593 TonB dependent receptor SCD_RS12590 PF07715 TonB-dependent Receptor Plug Domain SCD_RS12615 PF00158 Sigma-54 interaction domain SCD_RS12615 PF00072 Response regulator receiver domain SCD_RS12615 PF02954 Bacterial regulatory protein, Fis family SCD_RS12630 PF10411 Disulfide bond isomerase protein N-terminus SCD_RS12630 PF13098 Thioredoxin-like domain SCD_RS12635 PF01494 FAD binding domain SCD_RS12640 PF05195 Aminopeptidase P, N-terminal domain SCD_RS12640 PF00557 Metallopeptidase family M24 SCD_RS12645 PF00483 Nucleotidyl transferase SCD_RS12650 PF01636 Phosphotransferase enzyme family SCD_RS12655 PF03968 OstA-like protein SCD_RS12655 PF04453 LPS transport system D SCD_RS12660 PF00639 PPIC-type PPIASE domain SCD_RS12660 PF09312 SurA N-terminal domain SCD_RS12665 PF04166 Pyridoxal phosphate biosynthetic protein PdxA SCD_RS12670 PF00398 Ribosomal RNA adenine dimethylase SCD_RS12680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SCD_RS12700 PF02092 Glycyl-tRNA synthetase beta subunit SCD_RS12700 PF05746 DALR anticodon binding domain SCD_RS12705 PF02091 Glycyl-tRNA synthetase alpha subunit SCD_RS12710 PF01541 GIY-YIG catalytic domain SCD_RS12715 PF00795 Carbon-nitrogen hydrolase SCD_RS12720 PF13495 Phage integrase, N-terminal SAM-like domain SCD_RS12720 PF00589 Phage integrase family SCD_RS12740 PF04299 Putative FMN-binding domain SCD_RS12745 PF00892 EamA-like transporter family SCD_RS12765 PF00691 OmpA family SCD_RS12770 PF01740 STAS domain SCD_RS12770 PF00916 Sulfate permease family SCD_RS12780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS12780 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS12780 PF08521 Two-component sensor kinase N-terminal SCD_RS12785 PF00072 Response regulator receiver domain SCD_RS12785 PF00486 Transcriptional regulatory protein, C terminal SCD_RS12800 PF00571 CBS domain SCD_RS12800 PF03471 Transporter associated domain SCD_RS12805 PF02130 Uncharacterized protein family UPF0054 SCD_RS12810 PF02562 PhoH-like protein SCD_RS12815 PF00919 Uncharacterized protein family UPF0004 SCD_RS12815 PF01938 TRAM domain SCD_RS12815 PF04055 Radical SAM superfamily SCD_RS12835 PF07238 PilZ domain SCD_RS12855 PF05114 Protein of unknown function (DUF692) SCD_RS12865 PF07681 DoxX SCD_RS12880 PF12843 Putative quorum-sensing-regulated virulence factor SCD_RS12885 PF00916 Sulfate permease family SCD_RS12885 PF01740 STAS domain SCD_RS12905 PF00375 Sodium:dicarboxylate symporter family SCD_RS12925 PF01641 SelR domain SCD_RS12930 PF02683 Cytochrome C biogenesis protein transmembrane region SCD_RS12930 PF00578 AhpC/TSA family SCD_RS12930 PF17991 Thioredoxin like C-terminal domain SCD_RS12935 PF01625 Peptide methionine sulfoxide reductase SCD_RS12945 PF06071 Protein of unknown function (DUF933) SCD_RS12945 PF01926 50S ribosome-binding GTPase SCD_RS12950 PF00849 RNA pseudouridylate synthase SCD_RS12950 PF01479 S4 domain SCD_RS12955 PF01195 Peptidyl-tRNA hydrolase SCD_RS12960 PF01386 Ribosomal L25p family SCD_RS12960 PF14693 Ribosomal protein TL5, C-terminal domain SCD_RS12965 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SCD_RS12965 PF14572 Phosphoribosyl synthetase-associated domain SCD_RS12975 PF08544 GHMP kinases C terminal SCD_RS12975 PF00288 GHMP kinases N terminal domain SCD_RS12980 PF03550 Outer membrane lipoprotein LolB SCD_RS12990 PF00005 ABC transporter SCD_RS12990 PF13732 Domain of unknown function (DUF4162) SCD_RS13010 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SCD_RS13010 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SCD_RS13010 PF06827 Zinc finger found in FPG and IleRS SCD_RS13025 PF00037 4Fe-4S binding domain SCD_RS13030 PF01467 Cytidylyltransferase-like SCD_RS13040 PF05193 Peptidase M16 inactive domain SCD_RS13045 PF05193 Peptidase M16 inactive domain SCD_RS13045 PF00675 Insulinase (Peptidase family M16) SCD_RS13050 PF02881 SRP54-type protein, helical bundle domain SCD_RS13050 PF00448 SRP54-type protein, GTPase domain SCD_RS13055 PF00005 ABC transporter SCD_RS13060 PF18075 FtsX extracellular domain SCD_RS13065 PF04545 Sigma-70, region 4 SCD_RS13065 PF04542 Sigma-70 region 2 SCD_RS13065 PF00140 Sigma-70 factor, region 1.2 SCD_RS13070 PF03597 Cytochrome oxidase maturation protein cbb3-type SCD_RS13075 PF00403 Heavy-metal-associated domain SCD_RS13085 PF13746 4Fe-4S dicluster domain SCD_RS13085 PF12801 4Fe-4S binding domain SCD_RS13085 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase SCD_RS13090 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SCD_RS13090 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP SCD_RS13100 PF00115 Cytochrome C and Quinol oxidase polypeptide I SCD_RS13105 PF00027 Cyclic nucleotide-binding domain SCD_RS13105 PF00325 Bacterial regulatory proteins, crp family SCD_RS13110 PF02630 SCO1/SenC SCD_RS13115 PF02082 Transcriptional regulator SCD_RS13120 PF02628 Cytochrome oxidase assembly protein SCD_RS13125 PF01040 UbiA prenyltransferase family SCD_RS13145 PF00510 Cytochrome c oxidase subunit III SCD_RS13155 PF00115 Cytochrome C and Quinol oxidase polypeptide I SCD_RS13160 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SCD_RS13160 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SCD_RS13170 PF08241 Methyltransferase domain SCD_RS13175 PF00561 alpha/beta hydrolase fold SCD_RS13180 PF00155 Aminotransferase class I and II SCD_RS13185 PF06968 Biotin and Thiamin Synthesis associated domain SCD_RS13185 PF04055 Radical SAM superfamily SCD_RS13195 PF00156 Phosphoribosyl transferase domain SCD_RS13205 PF01471 Putative peptidoglycan binding domain SCD_RS13205 PF13401 AAA domain SCD_RS13210 PF03958 Bacterial type II/III secretion system short domain SCD_RS13210 PF00263 Bacterial type II and III secretion system protein SCD_RS13265 PF07963 Prokaryotic N-terminal methylation motif SCD_RS13270 PF07963 Prokaryotic N-terminal methylation motif SCD_RS13270 PF00114 Pilin (bacterial filament) SCD_RS13280 PF00482 Type II secretion system (T2SS), protein F SCD_RS13285 PF00437 Type II/IV secretion system protein SCD_RS13285 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SCD_RS13290 PF00588 SpoU rRNA Methylase family SCD_RS13295 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SCD_RS13295 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SCD_RS13305 PF02556 Preprotein translocase subunit SecB SCD_RS13310 PF00085 Thioredoxin SCD_RS13315 PF00462 Glutaredoxin SCD_RS13320 PF00581 Rhodanese-like domain SCD_RS13330 PF00873 AcrB/AcrD/AcrF family SCD_RS13335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SCD_RS13345 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SCD_RS13345 PF01676 Metalloenzyme superfamily SCD_RS13350 PF01551 Peptidase family M23 SCD_RS13355 PF03572 Peptidase family S41 SCD_RS13355 PF13180 PDZ domain SCD_RS13360 PF00899 ThiF family SCD_RS13370 PF00440 Bacterial regulatory proteins, tetR family SCD_RS13375 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SCD_RS13375 PF07992 Pyridine nucleotide-disulphide oxidoreductase SCD_RS13380 PF01521 Iron-sulphur cluster biosynthesis SCD_RS13385 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SCD_RS13385 PF07685 CobB/CobQ-like glutamine amidotransferase domain SCD_RS13395 PF13247 4Fe-4S dicluster domain SCD_RS13405 PF07992 Pyridine nucleotide-disulphide oxidoreductase SCD_RS13405 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SCD_RS13405 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SCD_RS13420 PF04358 DsrC like protein SCD_RS13425 PF04077 DsrH like protein SCD_RS13430 PF02635 DsrE/DsrF-like family SCD_RS13435 PF02635 DsrE/DsrF-like family SCD_RS13440 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SCD_RS13440 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SCD_RS13445 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SCD_RS13445 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SCD_RS13460 PF04358 DsrC like protein SCD_RS13465 PF00581 Rhodanese-like domain SCD_RS13475 PF00391 PEP-utilising enzyme, mobile domain SCD_RS13475 PF02896 PEP-utilising enzyme, TIM barrel domain SCD_RS13475 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SCD_RS13485 PF00521 DNA gyrase/topoisomerase IV, subunit A SCD_RS13490 PF00204 DNA gyrase B SCD_RS13490 PF01751 Toprim domain SCD_RS13490 PF00986 DNA gyrase B subunit, carboxyl terminus SCD_RS13490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS13500 PF01636 Phosphotransferase enzyme family SCD_RS13505 PF04337 Protein of unknown function, DUF480 SCD_RS13510 PF01641 SelR domain SCD_RS13520 PF03918 Cytochrome C biogenesis protein SCD_RS13525 PF08534 Redoxin SCD_RS13530 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal SCD_RS13530 PF01578 Cytochrome C assembly protein SCD_RS13535 PF03100 CcmE SCD_RS13540 PF04995 Heme exporter protein D (CcmD) SCD_RS13545 PF01578 Cytochrome C assembly protein SCD_RS13550 PF03379 CcmB protein SCD_RS13555 PF00005 ABC transporter SCD_RS13590 PF02954 Bacterial regulatory protein, Fis family SCD_RS13590 PF00072 Response regulator receiver domain SCD_RS13590 PF00158 Sigma-54 interaction domain SCD_RS13595 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS13595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS13610 PF01494 FAD binding domain SCD_RS13630 PF00999 Sodium/hydrogen exchanger family SCD_RS13650 PF02801 Beta-ketoacyl synthase, C-terminal domain SCD_RS13650 PF00109 Beta-ketoacyl synthase, N-terminal domain SCD_RS13660 PF01522 Polysaccharide deacetylase SCD_RS13680 PF07977 FabA-like domain SCD_RS13705 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SCD_RS13710 PF00580 UvrD/REP helicase N-terminal domain SCD_RS13710 PF13361 UvrD-like helicase C-terminal domain SCD_RS13720 PF01553 Acyltransferase SCD_RS13735 PF00294 pfkB family carbohydrate kinase SCD_RS13740 PF01219 Prokaryotic diacylglycerol kinase SCD_RS13745 PF02347 Glycine cleavage system P-protein SCD_RS13750 PF08534 Redoxin SCD_RS13755 PF02347 Glycine cleavage system P-protein SCD_RS13760 PF01597 Glycine cleavage H-protein SCD_RS13765 PF08669 Glycine cleavage T-protein C-terminal barrel domain SCD_RS13765 PF01571 Aminomethyltransferase folate-binding domain SCD_RS13780 PF02785 Biotin carboxylase C-terminal domain SCD_RS13780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SCD_RS13780 PF00289 Biotin carboxylase, N-terminal domain SCD_RS13785 PF00364 Biotin-requiring enzyme SCD_RS13790 PF01220 Dehydroquinase class II SCD_RS13795 PF00578 AhpC/TSA family SCD_RS13800 PF11412 Disulphide bond corrector protein DsbC SCD_RS13800 PF02683 Cytochrome C biogenesis protein transmembrane region SCD_RS13805 PF03091 CutA1 divalent ion tolerance protein SCD_RS13820 PF00175 Oxidoreductase NAD-binding domain SCD_RS13820 PF00970 Oxidoreductase FAD-binding domain SCD_RS13820 PF00111 2Fe-2S iron-sulfur cluster binding domain SCD_RS13840 PF02602 Uroporphyrinogen-III synthase HemD SCD_RS13845 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SCD_RS13845 PF03900 Porphobilinogen deaminase, C-terminal domain SCD_RS13855 PF00072 Response regulator receiver domain SCD_RS13855 PF04397 LytTr DNA-binding domain SCD_RS13860 PF06580 Histidine kinase SCD_RS13860 PF13492 GAF domain SCD_RS13860 PF07694 5TMR of 5TMR-LYT SCD_RS13860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS13865 PF00206 Lyase SCD_RS13865 PF14698 Argininosuccinate lyase C-terminal SCD_RS13875 PF00245 Alkaline phosphatase SCD_RS13885 PF08334 Type II secretion system (T2SS), protein G SCD_RS13885 PF07963 Prokaryotic N-terminal methylation motif SCD_RS13890 PF00482 Type II secretion system (T2SS), protein F SCD_RS13895 PF00437 Type II/IV secretion system protein SCD_RS13895 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SCD_RS13920 PF03958 Bacterial type II/III secretion system short domain SCD_RS13920 PF00263 Bacterial type II and III secretion system protein SCD_RS13930 PF07963 Prokaryotic N-terminal methylation motif SCD_RS13930 PF00114 Pilin (bacterial filament) SCD_RS13935 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases SCD_RS13935 PF03641 Possible lysine decarboxylase SCD_RS13935 PF11892 Domain of unknown function (DUF3412) SCD_RS13950 PF01551 Peptidase family M23 SCD_RS13950 PF01464 Transglycosylase SLT domain SCD_RS13950 PF10145 Phage-related minor tail protein SCD_RS13980 PF02472 Biopolymer transport protein ExbD/TolR SCD_RS13985 PF01618 MotA/TolQ/ExbB proton channel family SCD_RS13990 PF05860 haemagglutination activity domain SCD_RS14030 PF00563 EAL domain SCD_RS14030 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS14030 PF03707 Bacterial signalling protein N terminal repeat SCD_RS14035 PF17941 Polyphosphate kinase C-terminal domain 1 SCD_RS14035 PF13089 Polyphosphate kinase N-terminal domain SCD_RS14035 PF02503 Polyphosphate kinase middle domain SCD_RS14035 PF13090 Polyphosphate kinase C-terminal domain 2 SCD_RS14040 PF04362 Bacterial Fe(2+) trafficking SCD_RS14045 PF00696 Amino acid kinase family SCD_RS14045 PF00583 Acetyltransferase (GNAT) family SCD_RS14050 PF04452 RNA methyltransferase SCD_RS14060 PF00459 Inositol monophosphatase family SCD_RS14065 PF02779 Transketolase, pyrimidine binding domain SCD_RS14065 PF00456 Transketolase, thiamine diphosphate binding domain SCD_RS14065 PF02780 Transketolase, C-terminal domain SCD_RS14070 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SCD_RS14070 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SCD_RS14075 PF00162 Phosphoglycerate kinase SCD_RS14080 PF02887 Pyruvate kinase, alpha/beta domain SCD_RS14080 PF00224 Pyruvate kinase, barrel domain SCD_RS14085 PF01116 Fructose-bisphosphate aldolase class-II SCD_RS14090 PF03466 LysR substrate binding domain SCD_RS14090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SCD_RS14095 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain SCD_RS14095 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain SCD_RS14100 PF08406 CbbQ/NirQ/NorQ C-terminal SCD_RS14100 PF07728 AAA domain (dynein-related subfamily) SCD_RS14105 PF00092 von Willebrand factor type A domain SCD_RS14110 PF00365 Phosphofructokinase SCD_RS14115 PF00563 EAL domain SCD_RS14115 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS14115 PF03707 Bacterial signalling protein N terminal repeat SCD_RS14120 PF01925 Sulfite exporter TauE/SafE SCD_RS14130 PF01812 5-formyltetrahydrofolate cyclo-ligase family SCD_RS14135 PF05164 Cell division protein ZapA SCD_RS14145 PF00593 TonB dependent receptor SCD_RS14145 PF07715 TonB-dependent Receptor Plug Domain SCD_RS14150 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SCD_RS14155 PF13439 Glycosyltransferase Family 4 SCD_RS14155 PF00534 Glycosyl transferases group 1 SCD_RS14160 PF00664 ABC transporter transmembrane region SCD_RS14160 PF00005 ABC transporter SCD_RS14165 PF13439 Glycosyltransferase Family 4 SCD_RS14165 PF00534 Glycosyl transferases group 1 SCD_RS14180 PF00534 Glycosyl transferases group 1 SCD_RS14180 PF13579 Glycosyl transferase 4-like domain SCD_RS14210 PF02719 Polysaccharide biosynthesis protein SCD_RS14215 PF00953 Glycosyl transferase family 4 SCD_RS14220 PF01370 NAD dependent epimerase/dehydratase family SCD_RS14225 PF00535 Glycosyl transferase family 2 SCD_RS14230 PF00534 Glycosyl transferases group 1 SCD_RS14230 PF13579 Glycosyl transferase 4-like domain SCD_RS14240 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SCD_RS14270 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SCD_RS14290 PF00535 Glycosyl transferase family 2 SCD_RS14295 PF01209 ubiE/COQ5 methyltransferase family SCD_RS14300 PF00535 Glycosyl transferase family 2 SCD_RS14320 PF01425 Amidase SCD_RS14340 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SCD_RS14350 PF03102 NeuB family SCD_RS14350 PF08666 SAF domain SCD_RS14365 PF02585 GlcNAc-PI de-N-acetylase SCD_RS14375 PF02348 Cytidylyltransferase SCD_RS14380 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SCD_RS14385 PF02719 Polysaccharide biosynthesis protein SCD_RS14390 PF00664 ABC transporter transmembrane region SCD_RS14390 PF00005 ABC transporter SCD_RS14400 PF04321 RmlD substrate binding domain SCD_RS14405 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SCD_RS14410 PF00483 Nucleotidyl transferase SCD_RS14415 PF16363 GDP-mannose 4,6 dehydratase SCD_RS14420 PF01370 NAD dependent epimerase/dehydratase family SCD_RS14425 PF00535 Glycosyl transferase family 2 SCD_RS14430 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SCD_RS14435 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) SCD_RS14440 PF02321 Outer membrane efflux protein SCD_RS14450 PF13667 ThiC-associated domain SCD_RS14450 PF01964 Radical SAM ThiC family SCD_RS14455 PF02673 Bacitracin resistance protein BacA SCD_RS14460 PF02895 Signal transducing histidine kinase, homodimeric domain SCD_RS14460 PF07194 P2 response regulator binding domain SCD_RS14460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS14460 PF01584 CheW-like domain SCD_RS14460 PF01627 Hpt domain SCD_RS14465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SCD_RS14465 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term SCD_RS14475 PF00072 Response regulator receiver domain SCD_RS14480 PF00072 Response regulator receiver domain SCD_RS14485 PF08543 Phosphomethylpyrimidine kinase SCD_RS14490 PF02581 Thiamine monophosphate synthase SCD_RS14495 PF00202 Aminotransferase class-III SCD_RS14515 PF00034 Cytochrome c SCD_RS14520 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SCD_RS14525 PF00034 Cytochrome c SCD_RS14530 PF01926 50S ribosome-binding GTPase SCD_RS14535 PF00490 Delta-aminolevulinic acid dehydratase SCD_RS14540 PF07238 PilZ domain SCD_RS14540 PF07317 Flagellar regulator YcgR SCD_RS14550 PF00905 Penicillin binding protein transpeptidase domain SCD_RS14550 PF00912 Transglycosylase SCD_RS14550 PF17092 Penicillin-binding protein OB-like domain SCD_RS14555 PF11104 Type IV pilus assembly protein PilM; SCD_RS14565 PF04350 Pilus assembly protein, PilO SCD_RS14575 PF11741 AMIN domain SCD_RS14575 PF03958 Bacterial type II/III secretion system short domain SCD_RS14575 PF00263 Bacterial type II and III secretion system protein SCD_RS14575 PF07660 Secretin and TonB N terminus short domain SCD_RS14580 PF01202 Shikimate kinase SCD_RS14585 PF01761 3-dehydroquinate synthase SCD_RS14590 PF13286 Phosphohydrolase-associated domain SCD_RS14590 PF01966 HD domain SCD_RS14605 PF13614 AAA domain SCD_RS14615 PF13401 AAA domain SCD_RS14615 PF01471 Putative peptidoglycan binding domain SCD_RS14620 PF02350 UDP-N-acetylglucosamine 2-epimerase SCD_RS14625 PF01522 Polysaccharide deacetylase SCD_RS14645 PF00534 Glycosyl transferases group 1 SCD_RS14645 PF13439 Glycosyltransferase Family 4 SCD_RS14650 PF13537 Glutamine amidotransferase domain SCD_RS14650 PF00733 Asparagine synthase SCD_RS14655 PF13439 Glycosyltransferase Family 4 SCD_RS14655 PF00534 Glycosyl transferases group 1 SCD_RS14660 PF13439 Glycosyltransferase Family 4 SCD_RS14660 PF00534 Glycosyl transferases group 1 SCD_RS14675 PF02911 Formyl transferase, C-terminal domain SCD_RS14675 PF00551 Formyl transferase SCD_RS14695 PF00535 Glycosyl transferase family 2 SCD_RS14695 PF01501 Glycosyl transferase family 8 SCD_RS14700 PF13439 Glycosyltransferase Family 4 SCD_RS14700 PF00534 Glycosyl transferases group 1 SCD_RS14715 PF00535 Glycosyl transferase family 2 SCD_RS14720 PF00535 Glycosyl transferase family 2 SCD_RS14725 PF00884 Sulfatase SCD_RS14730 PF00535 Glycosyl transferase family 2 SCD_RS14745 PF02350 UDP-N-acetylglucosamine 2-epimerase SCD_RS14765 PF14524 Wzt C-terminal domain SCD_RS14765 PF00005 ABC transporter SCD_RS14785 PF00009 Elongation factor Tu GTP binding domain SCD_RS14790 PF00733 Asparagine synthase SCD_RS14790 PF13537 Glutamine amidotransferase domain SCD_RS14795 PF00158 Sigma-54 interaction domain SCD_RS14795 PF00072 Response regulator receiver domain SCD_RS14795 PF02954 Bacterial regulatory protein, Fis family SCD_RS14805 PF02397 Bacterial sugar transferase SCD_RS14815 PF01464 Transglycosylase SLT domain SCD_RS14840 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase SCD_RS14845 PF02687 FtsX-like permease family SCD_RS14845 PF12704 MacB-like periplasmic core domain SCD_RS14850 PF02687 FtsX-like permease family SCD_RS14850 PF12704 MacB-like periplasmic core domain SCD_RS14850 PF00005 ABC transporter SCD_RS14860 PF00005 ABC transporter SCD_RS14885 PF01493 GXGXG motif SCD_RS14885 PF01645 Conserved region in glutamate synthase SCD_RS14885 PF04898 Glutamate synthase central domain SCD_RS14885 PF00310 Glutamine amidotransferases class-II SCD_RS14890 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SCD_RS14890 PF07992 Pyridine nucleotide-disulphide oxidoreductase SCD_RS14895 PF01208 Uroporphyrinogen decarboxylase (URO-D) SCD_RS14900 PF00271 Helicase conserved C-terminal domain SCD_RS14900 PF00270 DEAD/DEAH box helicase SCD_RS14900 PF18074 Primosomal protein N C-terminal domain SCD_RS14900 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SCD_RS14900 PF17764 3′ DNA-binding domain (3′BD) SCD_RS14905 PF00750 tRNA synthetases class I (R) SCD_RS14905 PF05746 DALR anticodon binding domain SCD_RS14905 PF03485 Arginyl tRNA synthetase N terminal domain SCD_RS14915 PF13462 Thioredoxin SCD_RS14920 PF00072 Response regulator receiver domain SCD_RS14920 PF00196 Bacterial regulatory proteins, luxR family SCD_RS14930 PF13614 AAA domain SCD_RS14935 PF01380 SIS domain SCD_RS14940 PF00132 Bacterial transferase hexapeptide (six repeats) SCD_RS14940 PF12804 MobA-like NTP transferase domain SCD_RS14945 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SCD_RS14945 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SCD_RS14950 PF02874 ATP synthase alpha/beta family, beta-barrel domain SCD_RS14950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SCD_RS14955 PF00231 ATP synthase SCD_RS14960 PF02874 ATP synthase alpha/beta family, beta-barrel domain SCD_RS14960 PF00306 ATP synthase alpha/beta chain, C terminal domain SCD_RS14960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SCD_RS14965 PF00213 ATP synthase delta (OSCP) subunit SCD_RS14970 PF00430 ATP synthase B/B' CF(0) SCD_RS14975 PF00137 ATP synthase subunit C SCD_RS14980 PF00119 ATP synthase A chain SCD_RS14990 PF17762 HTH domain found in ParB protein SCD_RS14990 PF02195 ParB-like nuclease domain SCD_RS14995 PF13614 AAA domain SCD_RS15000 PF02527 rRNA small subunit methyltransferase G SCD_RS15005 PF13932 GidA associated domain SCD_RS15005 PF01134 Glucose inhibited division protein A SCD_RS15010 PF10396 GTP-binding protein TrmE N-terminus SCD_RS15010 PF12631 MnmE helical domain SCD_RS15010 PF01926 50S ribosome-binding GTPase SCD_RS15015 PF02096 60Kd inner membrane protein SCD_RS15015 PF14849 YidC periplasmic domain SCD_RS15020 PF00825 Ribonuclease P SCD_RS15040 PF00986 DNA gyrase B subunit, carboxyl terminus SCD_RS15040 PF01751 Toprim domain SCD_RS15040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS15040 PF18053 DNA gyrase B subunit insert domain SCD_RS15040 PF00204 DNA gyrase B SCD_RS15290 PF01207 Dihydrouridine synthase (Dus) SCD_RS15490 PF00145 C-5 cytosine-specific DNA methylase SCD_RS15500 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS15505 PF00072 Response regulator receiver domain SCD_RS15505 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS15505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS15505 PF00672 HAMP domain SCD_RS15505 PF17149 Periplasmic sensor domain found in signal transduction proteins SCD_RS15505 PF01627 Hpt domain SCD_RS15525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SCD_RS15525 PF00672 HAMP domain SCD_RS15525 PF12729 Four helix bundle sensory module for signal transduction SCD_RS15530 PF00425 chorismate binding enzyme SCD_RS15540 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS15540 PF03707 Bacterial signalling protein N terminal repeat SCD_RS15540 PF00563 EAL domain SCD_RS15545 PF00563 EAL domain SCD_RS15545 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS15545 PF03707 Bacterial signalling protein N terminal repeat SCD_RS15550 PF03707 Bacterial signalling protein N terminal repeat SCD_RS15550 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS15550 PF00563 EAL domain SCD_RS15560 PF00563 EAL domain SCD_RS15560 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS15560 PF08448 PAS fold SCD_RS15575 PF08448 PAS fold SCD_RS15575 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS15575 PF00563 EAL domain SCD_RS15580 PF08448 PAS fold SCD_RS15580 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS15580 PF00563 EAL domain SCD_RS15585 PF03707 Bacterial signalling protein N terminal repeat SCD_RS15585 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS15585 PF00563 EAL domain SCD_RS15590 PF05231 MASE1 SCD_RS15590 PF07730 Histidine kinase SCD_RS15590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS15610 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS15615 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS15615 PF01590 GAF domain SCD_RS15615 PF00360 Phytochrome region SCD_RS15615 PF00563 EAL domain SCD_RS15620 PF00578 AhpC/TSA family SCD_RS15625 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS15625 PF01590 GAF domain SCD_RS15625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS15625 PF00360 Phytochrome region SCD_RS15625 PF08446 PAS fold SCD_RS15630 PF00072 Response regulator receiver domain SCD_RS15630 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS15660 PF01966 HD domain SCD_RS15665 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS15665 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB SCD_RS15665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS15665 PF00672 HAMP domain SCD_RS15665 PF08448 PAS fold SCD_RS15670 PF03646 FlaG protein SCD_RS15680 PF00669 Bacterial flagellin N-terminal helical region SCD_RS15685 PF00460 Flagella basal body rod protein SCD_RS15685 PF00460 Flagella basal body rod protein SCD_RS15685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SCD_RS15685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SCD_RS15690 PF03707 Bacterial signalling protein N terminal repeat SCD_RS15690 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS15690 PF00563 EAL domain SCD_RS15705 PF17151 Periplasmic sensor domain SCD_RS15705 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS15710 PF11849 Domain of unknown function (DUF3369) SCD_RS15725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS15725 PF00360 Phytochrome region SCD_RS15725 PF08446 PAS fold SCD_RS15725 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS15725 PF01590 GAF domain SCD_RS15730 PF00563 EAL domain SCD_RS15730 PF03707 Bacterial signalling protein N terminal repeat SCD_RS15730 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS15735 PF01966 HD domain SCD_RS15750 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS15750 PF03707 Bacterial signalling protein N terminal repeat SCD_RS15750 PF00563 EAL domain SCD_RS15780 PF05567 Neisseria PilC beta-propeller domain SCD_RS15785 PF13426 PAS domain SCD_RS15785 PF00563 EAL domain SCD_RS15785 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS15805 PF03707 Bacterial signalling protein N terminal repeat SCD_RS15805 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS15805 PF00563 EAL domain SCD_RS15815 PF03707 Bacterial signalling protein N terminal repeat SCD_RS15815 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS15815 PF00563 EAL domain SCD_RS15820 PF03707 Bacterial signalling protein N terminal repeat SCD_RS15820 PF00563 EAL domain SCD_RS15820 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS15825 PF03707 Bacterial signalling protein N terminal repeat SCD_RS15825 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS15825 PF00563 EAL domain SCD_RS15830 PF08448 PAS fold SCD_RS15830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SCD_RS15830 PF00512 His Kinase A (phospho-acceptor) domain SCD_RS15830 PF13188 PAS domain SCD_RS15830 PF00072 Response regulator receiver domain SCD_RS15855 PF03707 Bacterial signalling protein N terminal repeat SCD_RS15855 PF00990 Diguanylate cyclase, GGDEF domain SCD_RS15855 PF00563 EAL domain SCD_RS15865 PF00072 Response regulator receiver domain SCD_RS15895 PF00672 HAMP domain SCD_RS15895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SCD_RS15895 PF12729 Four helix bundle sensory module for signal transduction SCD_RS15940 PF00535 Glycosyl transferase family 2 SCD_RS15945 PF13439 Glycosyltransferase Family 4 SCD_RS15945 PF00534 Glycosyl transferases group 1