SCD_RS06935 2d48e44053b9b91662f77dbfe86c0df6 293 Hamap MF_00367 GTPase Era [era]. 3 292 36.049 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 SCD_RS06935 2d48e44053b9b91662f77dbfe86c0df6 293 Pfam PF01926 50S ribosome-binding GTPase 8 121 3.2E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS06935 2d48e44053b9b91662f77dbfe86c0df6 293 Gene3D G3DSA:3.40.50.300 7 188 4.5E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06935 2d48e44053b9b91662f77dbfe86c0df6 293 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 166 1.2E-28 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SCD_RS06935 2d48e44053b9b91662f77dbfe86c0df6 293 Pfam PF07650 KH domain 205 280 1.8E-19 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 SCD_RS06935 2d48e44053b9b91662f77dbfe86c0df6 293 Gene3D G3DSA:3.30.300.20 189 288 6.0E-41 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SCD_RS06935 2d48e44053b9b91662f77dbfe86c0df6 293 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 76 94 1.6E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS06935 2d48e44053b9b91662f77dbfe86c0df6 293 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 8 28 1.6E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS06935 2d48e44053b9b91662f77dbfe86c0df6 293 PANTHER PTHR11649:SF3 4 293 2.9E-105 T 22-04-2016 SCD_RS06935 2d48e44053b9b91662f77dbfe86c0df6 293 TIGRFAM TIGR00436 era: GTP-binding protein Era 6 275 3.1E-91 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 SCD_RS06935 2d48e44053b9b91662f77dbfe86c0df6 293 SUPERFAMILY SSF52540 8 200 1.74E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06935 2d48e44053b9b91662f77dbfe86c0df6 293 SUPERFAMILY SSF54814 178 293 3.17E-43 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SCD_RS06935 2d48e44053b9b91662f77dbfe86c0df6 293 PANTHER PTHR11649 4 293 2.9E-105 T 22-04-2016 SCD_RS05550 7293cf8ca1b19bbb6fbb589c3f64e83f 319 Pfam PF04542 Sigma-70 region 2 85 154 3.6E-19 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05550 7293cf8ca1b19bbb6fbb589c3f64e83f 319 Gene3D G3DSA:1.10.601.10 43 154 2.6E-54 T 22-04-2016 SCD_RS05550 7293cf8ca1b19bbb6fbb589c3f64e83f 319 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 109 122 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05550 7293cf8ca1b19bbb6fbb589c3f64e83f 319 SUPERFAMILY SSF88946 47 155 4.84E-44 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05550 7293cf8ca1b19bbb6fbb589c3f64e83f 319 PANTHER PTHR30603:SF15 47 314 4.2E-124 T 22-04-2016 SCD_RS05550 7293cf8ca1b19bbb6fbb589c3f64e83f 319 SUPERFAMILY SSF88659 216 311 7.48E-24 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05550 7293cf8ca1b19bbb6fbb589c3f64e83f 319 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 80 307 5.3E-37 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05550 7293cf8ca1b19bbb6fbb589c3f64e83f 319 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 44 317 2.5E-131 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05550 7293cf8ca1b19bbb6fbb589c3f64e83f 319 SUPERFAMILY SSF88659 158 232 6.1E-12 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05550 7293cf8ca1b19bbb6fbb589c3f64e83f 319 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 2 319 37.562 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05550 7293cf8ca1b19bbb6fbb589c3f64e83f 319 PRINTS PR00046 Major sigma-70 factor signature 278 293 5.3E-24 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05550 7293cf8ca1b19bbb6fbb589c3f64e83f 319 PRINTS PR00046 Major sigma-70 factor signature 133 141 5.3E-24 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05550 7293cf8ca1b19bbb6fbb589c3f64e83f 319 PRINTS PR00046 Major sigma-70 factor signature 257 269 5.3E-24 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05550 7293cf8ca1b19bbb6fbb589c3f64e83f 319 PRINTS PR00046 Major sigma-70 factor signature 109 122 5.3E-24 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05550 7293cf8ca1b19bbb6fbb589c3f64e83f 319 PRINTS PR00046 Major sigma-70 factor signature 293 304 5.3E-24 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05550 7293cf8ca1b19bbb6fbb589c3f64e83f 319 Pfam PF04545 Sigma-70, region 4 253 305 3.4E-15 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05550 7293cf8ca1b19bbb6fbb589c3f64e83f 319 Gene3D G3DSA:1.10.10.10 158 207 1.8E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS05550 7293cf8ca1b19bbb6fbb589c3f64e83f 319 Pfam PF04539 Sigma-70 region 3 169 239 2.1E-13 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05550 7293cf8ca1b19bbb6fbb589c3f64e83f 319 Pfam PF00140 Sigma-70 factor, region 1.2 47 80 1.1E-9 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05550 7293cf8ca1b19bbb6fbb589c3f64e83f 319 Gene3D G3DSA:1.10.10.10 250 313 3.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS05550 7293cf8ca1b19bbb6fbb589c3f64e83f 319 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 278 304 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05550 7293cf8ca1b19bbb6fbb589c3f64e83f 319 PANTHER PTHR30603 47 314 4.2E-124 T 22-04-2016 SCD_RS08405 f26835cc7ad53e90663a0c69fbd65de1 367 Pfam PF02119 Flagellar P-ring protein 24 366 5.4E-141 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SCD_RS08405 f26835cc7ad53e90663a0c69fbd65de1 367 PRINTS PR01010 Flagellar P-ring protein signature 254 266 1.1E-80 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SCD_RS08405 f26835cc7ad53e90663a0c69fbd65de1 367 PRINTS PR01010 Flagellar P-ring protein signature 59 74 1.1E-80 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SCD_RS08405 f26835cc7ad53e90663a0c69fbd65de1 367 PRINTS PR01010 Flagellar P-ring protein signature 124 142 1.1E-80 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SCD_RS08405 f26835cc7ad53e90663a0c69fbd65de1 367 PRINTS PR01010 Flagellar P-ring protein signature 107 124 1.1E-80 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SCD_RS08405 f26835cc7ad53e90663a0c69fbd65de1 367 PRINTS PR01010 Flagellar P-ring protein signature 164 182 1.1E-80 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SCD_RS08405 f26835cc7ad53e90663a0c69fbd65de1 367 PRINTS PR01010 Flagellar P-ring protein signature 24 39 1.1E-80 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SCD_RS08405 f26835cc7ad53e90663a0c69fbd65de1 367 PRINTS PR01010 Flagellar P-ring protein signature 85 104 1.1E-80 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SCD_RS08405 f26835cc7ad53e90663a0c69fbd65de1 367 PRINTS PR01010 Flagellar P-ring protein signature 39 54 1.1E-80 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SCD_RS08405 f26835cc7ad53e90663a0c69fbd65de1 367 PRINTS PR01010 Flagellar P-ring protein signature 190 208 1.1E-80 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SCD_RS08405 f26835cc7ad53e90663a0c69fbd65de1 367 PANTHER PTHR30381:SF1 1 367 9.7E-194 T 22-04-2016 SCD_RS08405 f26835cc7ad53e90663a0c69fbd65de1 367 Hamap MF_00416 Flagellar P-ring protein [flgI]. 6 367 38.102 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SCD_RS08405 f26835cc7ad53e90663a0c69fbd65de1 367 PANTHER PTHR30381 1 367 9.7E-194 T 22-04-2016 SCD_RS13535 6e860336a3c94df209fbf0863c4b7111 150 SUPERFAMILY SSF82093 29 136 1.26E-38 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 SCD_RS13535 6e860336a3c94df209fbf0863c4b7111 150 Pfam PF03100 CcmE 4 130 2.5E-47 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 SCD_RS13535 6e860336a3c94df209fbf0863c4b7111 150 PANTHER PTHR34128:SF1 1 144 8.6E-49 T 22-04-2016 SCD_RS13535 6e860336a3c94df209fbf0863c4b7111 150 PANTHER PTHR34128 1 144 8.6E-49 T 22-04-2016 SCD_RS13535 6e860336a3c94df209fbf0863c4b7111 150 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 140 33.104 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 SCD_RS13535 6e860336a3c94df209fbf0863c4b7111 150 Gene3D G3DSA:2.40.50.140 25 124 2.1E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS03105 c7f41aab1ce2a6aa29e56532f7f03287 214 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site SCD_RS03105 c7f41aab1ce2a6aa29e56532f7f03287 214 Pfam PF00297 Ribosomal protein L3 66 185 2.1E-17 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03105 c7f41aab1ce2a6aa29e56532f7f03287 214 PANTHER PTHR11229 4 214 1.0E-102 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03105 c7f41aab1ce2a6aa29e56532f7f03287 214 Gene3D G3DSA:4.10.960.10 88 160 7.9E-28 T 22-04-2016 SCD_RS03105 c7f41aab1ce2a6aa29e56532f7f03287 214 SUPERFAMILY SSF50447 2 211 3.09E-77 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SCD_RS03105 c7f41aab1ce2a6aa29e56532f7f03287 214 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 38.675 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03105 c7f41aab1ce2a6aa29e56532f7f03287 214 Gene3D G3DSA:2.40.30.10 161 211 2.4E-10 T 22-04-2016 SCD_RS03105 c7f41aab1ce2a6aa29e56532f7f03287 214 Gene3D G3DSA:2.40.30.10 4 43 2.4E-10 T 22-04-2016 SCD_RS03105 c7f41aab1ce2a6aa29e56532f7f03287 214 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 207 4.4E-85 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS14410 bb6d061e23ced6ff3d542af84bad7180 291 SUPERFAMILY SSF53448 1 286 3.55E-96 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS14410 bb6d061e23ced6ff3d542af84bad7180 291 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 2.3E-159 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SCD_RS14410 bb6d061e23ced6ff3d542af84bad7180 291 PANTHER PTHR22572 2 267 2.0E-185 T 22-04-2016 SCD_RS14410 bb6d061e23ced6ff3d542af84bad7180 291 Pfam PF00483 Nucleotidyl transferase 2 238 2.2E-71 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SCD_RS14410 bb6d061e23ced6ff3d542af84bad7180 291 PANTHER PTHR22572:SF105 2 267 2.0E-185 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SCD_RS14410 bb6d061e23ced6ff3d542af84bad7180 291 Gene3D G3DSA:3.90.550.10 1 264 7.4E-71 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS11365 fce212cd8f600a1fec9a75390c521480 406 SUPERFAMILY SSF47384 159 200 2.35E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS11365 fce212cd8f600a1fec9a75390c521480 406 SUPERFAMILY SSF47384 227 256 2.35E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS11365 fce212cd8f600a1fec9a75390c521480 406 Gene3D G3DSA:1.10.287.130 160 191 1.1E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS11365 fce212cd8f600a1fec9a75390c521480 406 Gene3D G3DSA:1.10.287.130 226 245 1.1E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS11365 fce212cd8f600a1fec9a75390c521480 406 PANTHER PTHR24423:SF497 149 193 7.1E-75 T 22-04-2016 SCD_RS11365 fce212cd8f600a1fec9a75390c521480 406 PANTHER PTHR24423 223 405 7.1E-75 T 22-04-2016 SCD_RS11365 fce212cd8f600a1fec9a75390c521480 406 PANTHER PTHR24423 149 193 7.1E-75 T 22-04-2016 SCD_RS11365 fce212cd8f600a1fec9a75390c521480 406 Gene3D G3DSA:3.30.565.10 246 405 7.8E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS11365 fce212cd8f600a1fec9a75390c521480 406 SMART SM00387 299 406 1.9E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS11365 fce212cd8f600a1fec9a75390c521480 406 PANTHER PTHR24423:SF497 223 405 7.1E-75 T 22-04-2016 SCD_RS11365 fce212cd8f600a1fec9a75390c521480 406 Pfam PF00512 His Kinase A (phospho-acceptor) domain 166 257 4.7E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS11365 fce212cd8f600a1fec9a75390c521480 406 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 302 404 5.1E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS11365 fce212cd8f600a1fec9a75390c521480 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 404 9.2E-22 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS11365 fce212cd8f600a1fec9a75390c521480 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 350 9.2E-22 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS11365 fce212cd8f600a1fec9a75390c521480 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 385 9.2E-22 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS11365 fce212cd8f600a1fec9a75390c521480 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 364 9.2E-22 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS11365 fce212cd8f600a1fec9a75390c521480 406 SUPERFAMILY SSF55874 258 404 8.38E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS10860 bffc7dd19629229aebd154afcb2e5a57 296 Gene3D G3DSA:1.10.600.10 2 294 5.8E-89 T 22-04-2016 IPR008949 Isoprenoid synthase domain SCD_RS10860 bffc7dd19629229aebd154afcb2e5a57 296 PANTHER PTHR12001:SF23 3 291 1.5E-94 T 22-04-2016 SCD_RS10860 bffc7dd19629229aebd154afcb2e5a57 296 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SCD_RS10860 bffc7dd19629229aebd154afcb2e5a57 296 SUPERFAMILY SSF48576 3 289 1.46E-83 T 22-04-2016 IPR008949 Isoprenoid synthase domain SCD_RS10860 bffc7dd19629229aebd154afcb2e5a57 296 PANTHER PTHR12001 3 291 1.5E-94 T 22-04-2016 IPR017446 Polyprenyl synthetase-related SCD_RS10860 bffc7dd19629229aebd154afcb2e5a57 296 Pfam PF00348 Polyprenyl synthetase 31 257 5.1E-52 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SCD_RS10860 bffc7dd19629229aebd154afcb2e5a57 296 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 82 98 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SCD_RS14610 2e6a8bc4f7d981de80a07a7c2649fa83 496 SUPERFAMILY SSF56935 80 285 9.71E-9 T 22-04-2016 SCD_RS14610 2e6a8bc4f7d981de80a07a7c2649fa83 496 Pfam PF10082 Putative beta-barrel porin 2 11 272 5.1E-6 T 22-04-2016 IPR018759 Putative beta-barrel porin 2 SCD_RS14610 2e6a8bc4f7d981de80a07a7c2649fa83 496 TIGRFAM TIGR03016 pepcterm_hypo_1: uncharacterized protein, PEP-CTERM system associated 10 496 6.6E-139 T 22-04-2016 IPR017467 Conserved hypothetical protein CHP03016, PEP-CTERM SCD_RS14610 2e6a8bc4f7d981de80a07a7c2649fa83 496 Gene3D G3DSA:2.40.170.20 85 273 7.6E-5 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SCD_RS03120 53f1d71b8244116eec5d266479e1d14d 277 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 4.4E-57 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SCD_RS03120 53f1d71b8244116eec5d266479e1d14d 277 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 45.82 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SCD_RS03120 53f1d71b8244116eec5d266479e1d14d 277 SMART SM01382 124 252 3.0E-92 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SCD_RS03120 53f1d71b8244116eec5d266479e1d14d 277 Gene3D G3DSA:4.10.950.10 196 272 1.3E-33 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 SCD_RS03120 53f1d71b8244116eec5d266479e1d14d 277 PANTHER PTHR13691 1 277 1.0E-137 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03120 53f1d71b8244116eec5d266479e1d14d 277 PIRSF PIRSF002158 8 275 1.2E-99 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03120 53f1d71b8244116eec5d266479e1d14d 277 SMART SM01383 42 118 3.4E-42 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03120 53f1d71b8244116eec5d266479e1d14d 277 PANTHER PTHR13691:SF5 1 277 1.0E-137 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SCD_RS03120 53f1d71b8244116eec5d266479e1d14d 277 SUPERFAMILY SSF50104 126 272 3.85E-60 T 22-04-2016 IPR008991 Translation protein SH3-like domain SCD_RS03120 53f1d71b8244116eec5d266479e1d14d 277 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 SCD_RS03120 53f1d71b8244116eec5d266479e1d14d 277 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 1.2E-127 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SCD_RS03120 53f1d71b8244116eec5d266479e1d14d 277 SUPERFAMILY SSF50249 2 125 3.29E-45 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS03120 53f1d71b8244116eec5d266479e1d14d 277 Gene3D G3DSA:2.30.30.30 119 195 7.0E-34 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 SCD_RS03120 53f1d71b8244116eec5d266479e1d14d 277 Gene3D G3DSA:2.40.50.140 1 114 9.2E-47 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS03120 53f1d71b8244116eec5d266479e1d14d 277 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 5.3E-32 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS15650 6eb84f7815e4bc6eab95cb0671507b81 147 PANTHER PTHR34386 69 147 1.8E-14 T 22-04-2016 SCD_RS15650 6eb84f7815e4bc6eab95cb0671507b81 147 Gene3D G3DSA:3.40.30.10 70 145 9.7E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS15650 6eb84f7815e4bc6eab95cb0671507b81 147 SUPERFAMILY SSF52833 70 141 5.96E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS15650 6eb84f7815e4bc6eab95cb0671507b81 147 PANTHER PTHR34386:SF1 69 147 1.8E-14 T 22-04-2016 SCD_RS15650 6eb84f7815e4bc6eab95cb0671507b81 147 Pfam PF00462 Glutaredoxin 71 126 1.5E-10 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 SCD_RS15650 6eb84f7815e4bc6eab95cb0671507b81 147 Pfam PF13511 Domain of unknown function (DUF4124) 11 51 7.7E-6 T 22-04-2016 IPR025392 Domain of unknown function DUF4124 SCD_RS08690 dfac22ac73999773fbae0fc664742b6f 302 SUPERFAMILY SSF88713 4 37 4.73E-23 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SCD_RS08690 dfac22ac73999773fbae0fc664742b6f 302 SUPERFAMILY SSF88713 81 269 4.73E-23 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SCD_RS08690 dfac22ac73999773fbae0fc664742b6f 302 Gene3D G3DSA:3.20.20.370 12 37 7.7E-24 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SCD_RS08690 dfac22ac73999773fbae0fc664742b6f 302 Gene3D G3DSA:3.20.20.370 81 270 7.7E-24 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SCD_RS08690 dfac22ac73999773fbae0fc664742b6f 302 Pfam PF01522 Polysaccharide deacetylase 14 169 2.8E-9 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SCD_RS08110 c152048e3fda3026cb6e3141fdfd54af 856 SUPERFAMILY SSF81593 183 295 8.63E-9 T 22-04-2016 SCD_RS08110 c152048e3fda3026cb6e3141fdfd54af 856 PIRSF PIRSF006288 3 856 0.0 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 SCD_RS08110 c152048e3fda3026cb6e3141fdfd54af 856 SUPERFAMILY SSF109604 405 528 4.39E-16 T 22-04-2016 SCD_RS08110 c152048e3fda3026cb6e3141fdfd54af 856 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 856 303.04 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 SCD_RS08110 c152048e3fda3026cb6e3141fdfd54af 856 SUPERFAMILY SSF55021 784 837 6.11E-10 T 22-04-2016 SCD_RS08110 c152048e3fda3026cb6e3141fdfd54af 856 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 21 852 3.7E-252 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 SCD_RS08110 c152048e3fda3026cb6e3141fdfd54af 856 Gene3D G3DSA:1.10.3210.10 408 597 3.9E-24 T 22-04-2016 IPR006674 HD domain SCD_RS08110 c152048e3fda3026cb6e3141fdfd54af 856 SMART SM00471 434 581 5.4E-7 T 22-04-2016 IPR003607 HD/PDEase domain SCD_RS08110 c152048e3fda3026cb6e3141fdfd54af 856 SUPERFAMILY SSF55021 673 745 3.05E-8 T 22-04-2016 SCD_RS08110 c152048e3fda3026cb6e3141fdfd54af 856 Pfam PF01966 HD domain 439 545 5.8E-10 T 22-04-2016 IPR006674 HD domain SCD_RS08110 c152048e3fda3026cb6e3141fdfd54af 856 Pfam PF08335 GlnD PII-uridylyltransferase 163 301 1.7E-34 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 SCD_RS08110 c152048e3fda3026cb6e3141fdfd54af 856 Gene3D G3DSA:3.30.460.10 62 151 3.1E-5 T 22-04-2016 SCD_RS08110 c152048e3fda3026cb6e3141fdfd54af 856 PANTHER PTHR13734 82 672 2.8E-105 T 22-04-2016 SCD_RS08110 c152048e3fda3026cb6e3141fdfd54af 856 Gene3D G3DSA:3.30.70.260 785 852 6.2E-11 T 22-04-2016 SCD_RS08110 c152048e3fda3026cb6e3141fdfd54af 856 SUPERFAMILY SSF81301 27 153 4.07E-19 T 22-04-2016 SCD_RS08110 c152048e3fda3026cb6e3141fdfd54af 856 PANTHER PTHR13734:SF45 82 672 2.8E-105 T 22-04-2016 SCD_RS05500 1bddb330c17dcd0b93780a745466ed1c 65 PANTHER PTHR33343 1 65 8.3E-24 T 22-04-2016 SCD_RS05500 1bddb330c17dcd0b93780a745466ed1c 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.138 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SCD_RS05500 1bddb330c17dcd0b93780a745466ed1c 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 8.9E-27 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SCD_RS05500 1bddb330c17dcd0b93780a745466ed1c 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 4.3E-19 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SCD_RS05500 1bddb330c17dcd0b93780a745466ed1c 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 4.3E-19 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SCD_RS05500 1bddb330c17dcd0b93780a745466ed1c 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.3E-19 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SCD_RS05500 1bddb330c17dcd0b93780a745466ed1c 65 SUPERFAMILY SSF143034 2 64 1.1E-23 T 22-04-2016 SCD_RS05500 1bddb330c17dcd0b93780a745466ed1c 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS05500 1bddb330c17dcd0b93780a745466ed1c 65 Pfam PF01632 Ribosomal protein L35 2 62 5.6E-24 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS01365 e93e09ad6bc12eb227b9e88c9bb965aa 315 Pfam PF00924 Mechanosensitive ion channel 53 268 1.2E-26 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SCD_RS01365 e93e09ad6bc12eb227b9e88c9bb965aa 315 SUPERFAMILY SSF50182 96 170 1.21E-9 T 22-04-2016 IPR010920 LSM domain SCD_RS01365 e93e09ad6bc12eb227b9e88c9bb965aa 315 PANTHER PTHR30566 51 244 1.5E-21 T 22-04-2016 SCD_RS01365 e93e09ad6bc12eb227b9e88c9bb965aa 315 Gene3D G3DSA:2.30.30.60 112 169 3.0E-10 T 22-04-2016 SCD_RS01365 e93e09ad6bc12eb227b9e88c9bb965aa 315 PANTHER PTHR30566:SF14 51 244 1.5E-21 T 22-04-2016 SCD_RS05090 c1042d3bd78e397b0d402e94ba9c1938 354 PANTHER PTHR21022 1 351 1.0E-121 T 22-04-2016 SCD_RS05090 c1042d3bd78e397b0d402e94ba9c1938 354 Pfam PF00800 Prephenate dehydratase 87 263 6.3E-60 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SCD_RS05090 c1042d3bd78e397b0d402e94ba9c1938 354 Pfam PF01817 Chorismate mutase type II 9 83 6.2E-22 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SCD_RS05090 c1042d3bd78e397b0d402e94ba9c1938 354 Gene3D G3DSA:1.20.59.10 2 83 5.1E-21 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SCD_RS05090 c1042d3bd78e397b0d402e94ba9c1938 354 SUPERFAMILY SSF48600 4 87 1.32E-18 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SCD_RS05090 c1042d3bd78e397b0d402e94ba9c1938 354 PANTHER PTHR21022:SF0 1 351 1.0E-121 T 22-04-2016 SCD_RS05090 c1042d3bd78e397b0d402e94ba9c1938 354 SUPERFAMILY SSF55021 256 351 5.34E-28 T 22-04-2016 SCD_RS05090 c1042d3bd78e397b0d402e94ba9c1938 354 TIGRFAM TIGR01807 CM_P2: chorismate mutase 5 75 4.5E-27 T 22-04-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 SCD_RS05090 c1042d3bd78e397b0d402e94ba9c1938 354 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 237 259 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SCD_RS05090 c1042d3bd78e397b0d402e94ba9c1938 354 Gene3D G3DSA:3.30.70.260 267 352 5.2E-32 T 22-04-2016 SCD_RS05090 c1042d3bd78e397b0d402e94ba9c1938 354 Gene3D G3DSA:3.40.190.10 172 249 4.7E-26 T 22-04-2016 SCD_RS05090 c1042d3bd78e397b0d402e94ba9c1938 354 SUPERFAMILY SSF53850 86 269 2.5E-57 T 22-04-2016 SCD_RS05090 c1042d3bd78e397b0d402e94ba9c1938 354 Gene3D G3DSA:3.40.190.10 84 171 3.9E-31 T 22-04-2016 SCD_RS05090 c1042d3bd78e397b0d402e94ba9c1938 354 Pfam PF01842 ACT domain 273 337 2.7E-10 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SCD_RS05090 c1042d3bd78e397b0d402e94ba9c1938 354 PIRSF PIRSF001500 1 354 1.2E-139 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SCD_RS05090 c1042d3bd78e397b0d402e94ba9c1938 354 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 299 306 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SCD_RS05090 c1042d3bd78e397b0d402e94ba9c1938 354 SMART SM00830 9 85 2.9E-28 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SCD_RS08705 640d20029323a8e88921d70c5cc8f727 271 PANTHER PTHR11060:SF0 1 267 2.7E-56 T 22-04-2016 SCD_RS08705 640d20029323a8e88921d70c5cc8f727 271 Pfam PF01875 Memo-like protein 7 260 3.0E-48 T 22-04-2016 IPR002737 MEMO1 family SCD_RS08705 640d20029323a8e88921d70c5cc8f727 271 Hamap MF_00055 MEMO1 family protein . 3 264 48.057 T 22-04-2016 IPR002737 MEMO1 family SCD_RS08705 640d20029323a8e88921d70c5cc8f727 271 PANTHER PTHR11060 1 267 2.7E-56 T 22-04-2016 IPR002737 MEMO1 family SCD_RS08705 640d20029323a8e88921d70c5cc8f727 271 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 5 263 5.6E-79 T 22-04-2016 IPR002737 MEMO1 family SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 Pfam PF00204 DNA gyrase B 221 390 6.7E-57 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 PRINTS PR01159 DNA gyrase subunit B signature 4 14 3.3E-75 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 PRINTS PR01159 DNA gyrase subunit B signature 220 242 3.3E-75 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 PRINTS PR01159 DNA gyrase subunit B signature 374 394 3.3E-75 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 PRINTS PR01159 DNA gyrase subunit B signature 312 328 3.3E-75 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 PRINTS PR01159 DNA gyrase subunit B signature 196 209 3.3E-75 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 PRINTS PR01159 DNA gyrase subunit B signature 470 479 3.3E-75 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 PRINTS PR01159 DNA gyrase subunit B signature 749 761 3.3E-75 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 PRINTS PR01159 DNA gyrase subunit B signature 765 781 3.3E-75 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 PRINTS PR01159 DNA gyrase subunit B signature 181 196 3.3E-75 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 PRINTS PR01159 DNA gyrase subunit B signature 360 374 3.3E-75 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 SUPERFAMILY SSF56719 722 787 6.02E-87 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 SUPERFAMILY SSF56719 394 560 6.02E-87 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 SUPERFAMILY SSF55874 1 218 2.75E-68 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 SUPERFAMILY SSF54211 221 391 2.47E-59 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 Gene3D G3DSA:3.30.230.10 220 392 6.4E-74 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 1 796 101.222 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 Gene3D G3DSA:3.40.50.670 710 778 7.6E-98 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 Gene3D G3DSA:3.40.50.670 404 550 7.6E-98 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 Gene3D G3DSA:3.30.565.10 4 217 1.7E-92 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 Pfam PF01751 Toprim domain 419 531 6.6E-17 T 22-04-2016 IPR006171 Toprim domain SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 PANTHER PTHR10169 2 553 4.3E-290 T 22-04-2016 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 PANTHER PTHR10169 716 796 4.3E-290 T 22-04-2016 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 SMART SM00387 30 176 5.3E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 725 785 5.8E-29 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 SMART SM00433 34 789 1.3E-261 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 175 2.7E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 PRINTS PR00418 DNA topoisomerase II family signature 34 49 2.4E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 PRINTS PR00418 DNA topoisomerase II family signature 525 537 2.4E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 PRINTS PR00418 DNA topoisomerase II family signature 420 434 2.4E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 PRINTS PR00418 DNA topoisomerase II family signature 728 744 2.4E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 PRINTS PR00418 DNA topoisomerase II family signature 268 281 2.4E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 PRINTS PR00418 DNA topoisomerase II family signature 487 503 2.4E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 PRINTS PR00418 DNA topoisomerase II family signature 114 128 2.4E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 PRINTS PR00418 DNA topoisomerase II family signature 69 82 2.4E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 PRINTS PR00418 DNA topoisomerase II family signature 505 522 2.4E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS00015 4aafeb8a3fa79a6fd4987efcda29ce42 796 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 4 796 1.7E-297 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 SUPERFAMILY SSF56014 637 798 2.62E-51 T 22-04-2016 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 Gene3D G3DSA:3.50.50.60 2 110 1.3E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 472 3.2E-13 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 Pfam PF04324 BFD-like [2Fe-2S] binding domain 488 537 2.9E-12 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 SUPERFAMILY SSF51905 2 192 1.56E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 SUPERFAMILY SSF55124 519 645 3.43E-24 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 683 699 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 Gene3D G3DSA:3.50.50.60 111 307 1.7E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 281 2.2E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 PANTHER PTHR22912:SF1 1 415 2.8E-157 T 22-04-2016 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 PIRSF PIRSF037149 1 812 0.0 T 22-04-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 Gene3D G3DSA:3.30.413.10 636 771 3.0E-36 T 22-04-2016 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.5E-20 T 22-04-2016 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.5E-20 T 22-04-2016 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.5E-20 T 22-04-2016 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 1.5E-20 T 22-04-2016 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.5E-20 T 22-04-2016 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 SUPERFAMILY SSF51905 144 310 8.64E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 636 774 1.4E-26 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 563 626 3.3E-13 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 PRINTS PR00397 Sirohaem Fe-binding site signature 640 658 5.7E-7 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 PRINTS PR00397 Sirohaem Fe-binding site signature 683 701 5.7E-7 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 797 1.9E-292 T 22-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.2E-12 T 22-04-2016 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 1.2E-12 T 22-04-2016 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 1.2E-12 T 22-04-2016 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 1.2E-12 T 22-04-2016 SCD_RS11200 2b93cee828be6e735c9123a50b26de9b 815 PANTHER PTHR22912 1 415 2.8E-157 T 22-04-2016 SCD_RS12445 205e3fbf8de7940be6ab47bec99205ea 116 Pfam PF01521 Iron-sulphur cluster biosynthesis 11 111 8.3E-22 T 22-04-2016 IPR000361 FeS cluster biogenesis SCD_RS12445 205e3fbf8de7940be6ab47bec99205ea 116 Gene3D G3DSA:2.60.300.12 6 102 3.4E-34 T 22-04-2016 IPR000361 FeS cluster biogenesis SCD_RS12445 205e3fbf8de7940be6ab47bec99205ea 116 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 116 36.764 T 22-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 SCD_RS12445 205e3fbf8de7940be6ab47bec99205ea 116 PANTHER PTHR10072 11 115 2.5E-48 T 22-04-2016 SCD_RS12445 205e3fbf8de7940be6ab47bec99205ea 116 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 12 115 3.7E-39 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 SCD_RS12445 205e3fbf8de7940be6ab47bec99205ea 116 SUPERFAMILY SSF89360 11 105 1.57E-32 T 22-04-2016 IPR000361 FeS cluster biogenesis SCD_RS12445 205e3fbf8de7940be6ab47bec99205ea 116 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 97 114 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site SCD_RS15525 7d5b66b8f99ae8eab571c0423ccd5e6b 551 SMART SM00304 221 274 4.1E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS15525 7d5b66b8f99ae8eab571c0423ccd5e6b 551 SUPERFAMILY SSF58104 242 551 7.46E-80 T 22-04-2016 SCD_RS15525 7d5b66b8f99ae8eab571c0423ccd5e6b 551 Pfam PF00672 HAMP domain 202 271 6.3E-16 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS15525 7d5b66b8f99ae8eab571c0423ccd5e6b 551 Gene3D G3DSA:1.10.287.950 304 522 8.6E-58 T 22-04-2016 SCD_RS15525 7d5b66b8f99ae8eab571c0423ccd5e6b 551 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 192 1.1E-24 T 22-04-2016 IPR024478 4HB MCP domain SCD_RS15525 7d5b66b8f99ae8eab571c0423ccd5e6b 551 PANTHER PTHR32089 157 551 8.5E-124 T 22-04-2016 SCD_RS15525 7d5b66b8f99ae8eab571c0423ccd5e6b 551 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 351 549 1.7E-56 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SCD_RS15525 7d5b66b8f99ae8eab571c0423ccd5e6b 551 SMART SM00283 289 550 2.8E-83 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SCD_RS15525 7d5b66b8f99ae8eab571c0423ccd5e6b 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 387 414 4.06E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SCD_RS15525 7d5b66b8f99ae8eab571c0423ccd5e6b 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 416 445 4.06E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SCD_RS15525 7d5b66b8f99ae8eab571c0423ccd5e6b 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 4.06E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SCD_RS15525 7d5b66b8f99ae8eab571c0423ccd5e6b 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 310 339 4.06E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SCD_RS09805 ef883052a65a1cc0ca24022b5f7af32b 342 PANTHER PTHR30578 2 342 6.0E-126 T 22-04-2016 SCD_RS09805 ef883052a65a1cc0ca24022b5f7af32b 342 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 3 336 8.0E-121 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 SCD_RS09805 ef883052a65a1cc0ca24022b5f7af32b 342 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 1 337 26.739 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 SCD_RS09805 ef883052a65a1cc0ca24022b5f7af32b 342 Pfam PF03116 NQR2, RnfD, RnfE family 2 335 5.4E-104 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 SCD_RS09805 ef883052a65a1cc0ca24022b5f7af32b 342 PANTHER PTHR30578:SF0 2 342 6.0E-126 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 SCD_RS08435 7afd1c299b0db0fe74bde4d8272468b9 136 PANTHER PTHR30435:SF2 1 136 9.2E-66 T 22-04-2016 SCD_RS08435 7afd1c299b0db0fe74bde4d8272468b9 136 PANTHER PTHR30435 1 136 9.2E-66 T 22-04-2016 SCD_RS08435 7afd1c299b0db0fe74bde4d8272468b9 136 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site SCD_RS08435 7afd1c299b0db0fe74bde4d8272468b9 136 Pfam PF00460 Flagella basal body rod protein 7 32 3.8E-8 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SCD_RS08435 7afd1c299b0db0fe74bde4d8272468b9 136 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 136 8.3E-52 T 22-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 SCD_RS08435 7afd1c299b0db0fe74bde4d8272468b9 136 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 89 134 1.3E-15 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SCD_RS03140 21e78eea867493450904d837377a681f 138 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 5.7E-47 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SCD_RS03140 21e78eea867493450904d837377a681f 138 PRINTS PR00060 Ribosomal protein L16 signature 88 117 8.4E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SCD_RS03140 21e78eea867493450904d837377a681f 138 PRINTS PR00060 Ribosomal protein L16 signature 42 53 8.4E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SCD_RS03140 21e78eea867493450904d837377a681f 138 PRINTS PR00060 Ribosomal protein L16 signature 24 36 8.4E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SCD_RS03140 21e78eea867493450904d837377a681f 138 PRINTS PR00060 Ribosomal protein L16 signature 58 87 8.4E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SCD_RS03140 21e78eea867493450904d837377a681f 138 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 7.2E-59 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SCD_RS03140 21e78eea867493450904d837377a681f 138 PANTHER PTHR12220 1 136 7.8E-74 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SCD_RS03140 21e78eea867493450904d837377a681f 138 Gene3D G3DSA:3.90.1170.10 22 135 8.2E-53 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SCD_RS03140 21e78eea867493450904d837377a681f 138 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.389 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SCD_RS03140 21e78eea867493450904d837377a681f 138 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03140 21e78eea867493450904d837377a681f 138 SUPERFAMILY SSF54686 1 134 1.57E-53 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SCD_RS08890 0d5a50a9e1d93a74df5110023a948e16 436 SUPERFAMILY SSF52540 3 435 1.49E-175 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08890 0d5a50a9e1d93a74df5110023a948e16 436 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SCD_RS08890 0d5a50a9e1d93a74df5110023a948e16 436 Pfam PF00709 Adenylosuccinate synthetase 5 429 2.9E-174 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SCD_RS08890 0d5a50a9e1d93a74df5110023a948e16 436 PANTHER PTHR11846 3 434 3.7E-238 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SCD_RS08890 0d5a50a9e1d93a74df5110023a948e16 436 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 436 212.505 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SCD_RS08890 0d5a50a9e1d93a74df5110023a948e16 436 Gene3D G3DSA:1.10.300.10 102 196 1.2E-34 T 22-04-2016 SCD_RS08890 0d5a50a9e1d93a74df5110023a948e16 436 SMART SM00788 4 430 5.1E-294 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SCD_RS08890 0d5a50a9e1d93a74df5110023a948e16 436 Gene3D G3DSA:3.40.440.10 197 266 1.7E-70 T 22-04-2016 SCD_RS08890 0d5a50a9e1d93a74df5110023a948e16 436 Gene3D G3DSA:3.40.440.10 3 94 1.7E-70 T 22-04-2016 SCD_RS08890 0d5a50a9e1d93a74df5110023a948e16 436 Gene3D G3DSA:3.90.170.10 267 431 5.6E-66 T 22-04-2016 SCD_RS08890 0d5a50a9e1d93a74df5110023a948e16 436 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 SCD_RS08890 0d5a50a9e1d93a74df5110023a948e16 436 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 435 2.3E-178 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SCD_RS04230 39072c8da4e2c4fe1f51de8e3dadf16f 413 SMART SM00052 1 201 9.2E-6 T 22-04-2016 IPR001633 EAL domain SCD_RS04230 39072c8da4e2c4fe1f51de8e3dadf16f 413 PANTHER PTHR33525 7 407 5.0E-92 T 22-04-2016 SCD_RS04230 39072c8da4e2c4fe1f51de8e3dadf16f 413 PIRSF PIRSF003180 5 411 2.7E-124 T 22-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing SCD_RS04230 39072c8da4e2c4fe1f51de8e3dadf16f 413 SUPERFAMILY SSF141868 7 201 1.1E-32 T 22-04-2016 IPR001633 EAL domain SCD_RS04230 39072c8da4e2c4fe1f51de8e3dadf16f 413 SUPERFAMILY SSF109604 187 405 3.04E-36 T 22-04-2016 SCD_RS04230 39072c8da4e2c4fe1f51de8e3dadf16f 413 Gene3D G3DSA:3.20.20.450 86 190 1.8E-14 T 22-04-2016 IPR001633 EAL domain SCD_RS04230 39072c8da4e2c4fe1f51de8e3dadf16f 413 Gene3D G3DSA:1.10.3150.10 191 357 3.8E-30 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS04230 39072c8da4e2c4fe1f51de8e3dadf16f 413 PANTHER PTHR33525:SF4 7 407 5.0E-92 T 22-04-2016 SCD_RS04230 39072c8da4e2c4fe1f51de8e3dadf16f 413 Pfam PF00563 EAL domain 13 196 6.4E-15 T 22-04-2016 IPR001633 EAL domain SCD_RS04230 39072c8da4e2c4fe1f51de8e3dadf16f 413 Pfam PF08668 HDOD domain 221 329 7.2E-13 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS08370 e404db49ff97fca0a4d2f0f13491bd0e 413 PIRSF PIRSF033563 1 413 2.1E-133 T 22-04-2016 IPR008323 Uncharacterised conserved protein UCP033563 SCD_RS08370 e404db49ff97fca0a4d2f0f13491bd0e 413 PANTHER PTHR36454 1 413 1.7E-139 T 22-04-2016 SCD_RS08370 e404db49ff97fca0a4d2f0f13491bd0e 413 PANTHER PTHR36454:SF1 1 413 1.7E-139 T 22-04-2016 SCD_RS08370 e404db49ff97fca0a4d2f0f13491bd0e 413 Pfam PF06245 Protein of unknown function (DUF1015) 4 410 1.3E-133 T 22-04-2016 IPR008323 Uncharacterised conserved protein UCP033563 SCD_RS02540 d4c5931e6a3c31c559d44ba459cabe43 68 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 58 4.7E-21 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SCD_RS02540 d4c5931e6a3c31c559d44ba459cabe43 68 PANTHER PTHR34476 2 65 5.7E-18 T 22-04-2016 SCD_RS02540 d4c5931e6a3c31c559d44ba459cabe43 68 Pfam PF01192 RNA polymerase Rpb6 8 58 4.4E-17 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SCD_RS02540 d4c5931e6a3c31c559d44ba459cabe43 68 SUPERFAMILY SSF63562 1 64 3.79E-22 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SCD_RS02540 d4c5931e6a3c31c559d44ba459cabe43 68 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 16.978 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SCD_RS02540 d4c5931e6a3c31c559d44ba459cabe43 68 SMART SM01409 8 60 5.7E-15 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SCD_RS02540 d4c5931e6a3c31c559d44ba459cabe43 68 Gene3D G3DSA:3.90.940.10 1 62 3.7E-14 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SCD_RS04745 d2b8faac761f798a99f30da93d88d33e 715 Gene3D G3DSA:3.40.50.300 423 538 2.3E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04745 d2b8faac761f798a99f30da93d88d33e 715 Gene3D G3DSA:3.40.50.300 140 288 7.2E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04745 d2b8faac761f798a99f30da93d88d33e 715 SMART SM00487 136 313 8.9E-20 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SCD_RS04745 d2b8faac761f798a99f30da93d88d33e 715 SUPERFAMILY SSF52540 407 543 5.53E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04745 d2b8faac761f798a99f30da93d88d33e 715 SUPERFAMILY SSF52540 252 287 5.53E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04745 d2b8faac761f798a99f30da93d88d33e 715 Pfam PF00271 Helicase conserved C-terminal domain 424 529 8.9E-7 T 22-04-2016 IPR001650 Helicase, C-terminal SCD_RS04745 d2b8faac761f798a99f30da93d88d33e 715 Pfam PF04851 Type III restriction enzyme, res subunit 139 287 1.1E-33 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SCD_RS04745 d2b8faac761f798a99f30da93d88d33e 715 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 37 100 2.9E-8 T 22-04-2016 IPR029464 Type I restriction enzyme R protein, N-terminal domain SCD_RS04745 d2b8faac761f798a99f30da93d88d33e 715 SUPERFAMILY SSF52540 103 336 1.05E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04745 d2b8faac761f798a99f30da93d88d33e 715 PANTHER PTHR30195 13 558 1.5E-92 T 22-04-2016 SCD_RS04745 d2b8faac761f798a99f30da93d88d33e 715 PANTHER PTHR30195:SF3 13 558 1.5E-92 T 22-04-2016 SCD_RS07410 490738514f0632929c3e5e95c9f91f3f 587 SUPERFAMILY SSF56425 236 355 7.63E-42 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SCD_RS07410 490738514f0632929c3e5e95c9f91f3f 587 Gene3D G3DSA:3.50.50.60 350 425 6.4E-118 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS07410 490738514f0632929c3e5e95c9f91f3f 587 Gene3D G3DSA:3.50.50.60 5 242 6.4E-118 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS07410 490738514f0632929c3e5e95c9f91f3f 587 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 7 587 2.4E-279 T 22-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SCD_RS07410 490738514f0632929c3e5e95c9f91f3f 587 Gene3D G3DSA:3.90.700.10 243 349 3.3E-39 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SCD_RS07410 490738514f0632929c3e5e95c9f91f3f 587 PIRSF PIRSF000171 1 573 4.1E-45 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit SCD_RS07410 490738514f0632929c3e5e95c9f91f3f 587 Pfam PF02910 Fumarate reductase flavoprotein C-term 459 587 6.9E-40 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SCD_RS07410 490738514f0632929c3e5e95c9f91f3f 587 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 SCD_RS07410 490738514f0632929c3e5e95c9f91f3f 587 PANTHER PTHR11632 3 582 0.0 T 22-04-2016 SCD_RS07410 490738514f0632929c3e5e95c9f91f3f 587 SUPERFAMILY SSF51905 6 259 8.82E-78 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS07410 490738514f0632929c3e5e95c9f91f3f 587 SUPERFAMILY SSF51905 358 432 8.82E-78 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS07410 490738514f0632929c3e5e95c9f91f3f 587 SUPERFAMILY SSF46977 451 587 4.19E-48 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SCD_RS07410 490738514f0632929c3e5e95c9f91f3f 587 Gene3D G3DSA:1.20.58.100 446 554 6.4E-37 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SCD_RS07410 490738514f0632929c3e5e95c9f91f3f 587 PANTHER PTHR11632:SF5 3 582 0.0 T 22-04-2016 SCD_RS07410 490738514f0632929c3e5e95c9f91f3f 587 Pfam PF00890 FAD binding domain 9 404 5.7E-117 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SCD_RS07410 490738514f0632929c3e5e95c9f91f3f 587 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 587 2.8E-240 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SCD_RS07410 490738514f0632929c3e5e95c9f91f3f 587 Gene3D G3DSA:4.10.80.40 555 587 1.6E-22 T 22-04-2016 SCD_RS13115 6902a9b07aa524a5f82d9586cd4ad489 157 Gene3D G3DSA:1.10.10.10 1 132 1.8E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS13115 6902a9b07aa524a5f82d9586cd4ad489 157 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 2.0E-27 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type SCD_RS13115 6902a9b07aa524a5f82d9586cd4ad489 157 PANTHER PTHR33221 2 154 2.2E-21 T 22-04-2016 SCD_RS13115 6902a9b07aa524a5f82d9586cd4ad489 157 PANTHER PTHR33221:SF2 2 154 2.2E-21 T 22-04-2016 SCD_RS13115 6902a9b07aa524a5f82d9586cd4ad489 157 SUPERFAMILY SSF46785 3 131 1.16E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS13115 6902a9b07aa524a5f82d9586cd4ad489 157 Pfam PF02082 Transcriptional regulator 1 82 4.9E-16 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type SCD_RS06555 254d6b642bbe4378e5824e7d6765c0c6 217 Gene3D G3DSA:2.10.70.20 170 215 4.1E-5 T 22-04-2016 SCD_RS06555 254d6b642bbe4378e5824e7d6765c0c6 217 PANTHER PTHR39583 17 216 1.7E-24 T 22-04-2016 SCD_RS06555 254d6b642bbe4378e5824e7d6765c0c6 217 Gene3D G3DSA:3.10.610.10 58 164 3.0E-17 T 22-04-2016 SCD_RS06555 254d6b642bbe4378e5824e7d6765c0c6 217 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 25 45 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS06555 254d6b642bbe4378e5824e7d6765c0c6 217 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 26 215 4.9E-37 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 SCD_RS06555 254d6b642bbe4378e5824e7d6765c0c6 217 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 25 47 5.3E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS06555 254d6b642bbe4378e5824e7d6765c0c6 217 SUPERFAMILY SSF54523 27 58 6.67E-6 T 22-04-2016 SCD_RS06555 254d6b642bbe4378e5824e7d6765c0c6 217 PANTHER PTHR39583:SF1 17 216 1.7E-24 T 22-04-2016 SCD_RS06555 254d6b642bbe4378e5824e7d6765c0c6 217 Pfam PF13633 Prokaryotic N-terminal methylation site 26 49 4.7E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS06555 254d6b642bbe4378e5824e7d6765c0c6 217 Pfam PF11612 Type II secretion system (T2SS), protein J 78 215 7.3E-30 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 SCD_RS06555 254d6b642bbe4378e5824e7d6765c0c6 217 SUPERFAMILY SSF54523 66 216 5.18E-29 T 22-04-2016 SCD_RS14515 230cd474def4e096ce04f826ab52c10e 237 Gene3D G3DSA:1.10.760.10 147 227 4.0E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS14515 230cd474def4e096ce04f826ab52c10e 237 PANTHER PTHR33751:SF3 54 234 1.8E-34 T 22-04-2016 SCD_RS14515 230cd474def4e096ce04f826ab52c10e 237 Gene3D G3DSA:1.10.760.10 54 134 5.4E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS14515 230cd474def4e096ce04f826ab52c10e 237 PIRSF PIRSF000005 1 229 3.9E-38 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 SCD_RS14515 230cd474def4e096ce04f826ab52c10e 237 Pfam PF00034 Cytochrome c 56 135 2.9E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS14515 230cd474def4e096ce04f826ab52c10e 237 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 148 224 2.5E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS14515 230cd474def4e096ce04f826ab52c10e 237 PANTHER PTHR33751 54 234 1.8E-34 T 22-04-2016 SCD_RS14515 230cd474def4e096ce04f826ab52c10e 237 SUPERFAMILY SSF46626 146 227 3.58E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS14515 230cd474def4e096ce04f826ab52c10e 237 SUPERFAMILY SSF46626 49 135 1.31E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS04225 8300018ec12b93a6081a5d52d8c94880 873 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 694 2.8E-15 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SCD_RS04225 8300018ec12b93a6081a5d52d8c94880 873 SUPERFAMILY SSF50447 453 551 1.09E-17 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SCD_RS04225 8300018ec12b93a6081a5d52d8c94880 873 Pfam PF02272 DHHA1 domain 799 866 8.0E-17 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SCD_RS04225 8300018ec12b93a6081a5d52d8c94880 873 SUPERFAMILY SSF55681 2 251 2.73E-109 T 22-04-2016 SCD_RS04225 8300018ec12b93a6081a5d52d8c94880 873 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 852 0.0 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SCD_RS04225 8300018ec12b93a6081a5d52d8c94880 873 SMART SM00863 652 694 9.2E-19 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SCD_RS04225 8300018ec12b93a6081a5d52d8c94880 873 PANTHER PTHR11777:SF9 1 873 0.0 T 22-04-2016 SCD_RS04225 8300018ec12b93a6081a5d52d8c94880 873 Pfam PF01411 tRNA synthetases class II (A) 5 554 3.7E-221 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 SCD_RS04225 8300018ec12b93a6081a5d52d8c94880 873 SUPERFAMILY SSF55186 551 711 2.09E-47 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 SCD_RS04225 8300018ec12b93a6081a5d52d8c94880 873 SUPERFAMILY SSF101353 252 445 2.48E-60 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SCD_RS04225 8300018ec12b93a6081a5d52d8c94880 873 Gene3D G3DSA:3.30.930.10 1 248 6.8E-126 T 22-04-2016 SCD_RS04225 8300018ec12b93a6081a5d52d8c94880 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 232 245 8.0E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SCD_RS04225 8300018ec12b93a6081a5d52d8c94880 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 302 315 8.0E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SCD_RS04225 8300018ec12b93a6081a5d52d8c94880 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 205 216 8.0E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SCD_RS04225 8300018ec12b93a6081a5d52d8c94880 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 8.0E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SCD_RS04225 8300018ec12b93a6081a5d52d8c94880 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 278 294 8.0E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SCD_RS04225 8300018ec12b93a6081a5d52d8c94880 873 PANTHER PTHR11777 1 873 0.0 T 22-04-2016 SCD_RS04225 8300018ec12b93a6081a5d52d8c94880 873 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 873 201.098 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 SCD_RS09085 996c6cd618701b68898604edb314c250 377 SUPERFAMILY SSF158472 117 165 4.84E-5 T 22-04-2016 SCD_RS09085 996c6cd618701b68898604edb314c250 377 SUPERFAMILY SSF55874 219 375 7.73E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS09085 996c6cd618701b68898604edb314c250 377 Gene3D G3DSA:3.30.565.10 243 375 2.5E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS09085 996c6cd618701b68898604edb314c250 377 Gene3D G3DSA:1.10.287.130 162 224 1.1E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS09085 996c6cd618701b68898604edb314c250 377 PANTHER PTHR24423 111 376 1.5E-45 T 22-04-2016 SCD_RS09085 996c6cd618701b68898604edb314c250 377 PANTHER PTHR24423 11 23 1.5E-45 T 22-04-2016 SCD_RS09085 996c6cd618701b68898604edb314c250 377 SMART SM00304 117 169 1.5E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS09085 996c6cd618701b68898604edb314c250 377 SMART SM00388 170 228 7.8E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS09085 996c6cd618701b68898604edb314c250 377 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 269 375 1.8E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS09085 996c6cd618701b68898604edb314c250 377 SUPERFAMILY SSF47384 153 227 6.47E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS09085 996c6cd618701b68898604edb314c250 377 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 317 1.5E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS09085 996c6cd618701b68898604edb314c250 377 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 374 1.5E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS09085 996c6cd618701b68898604edb314c250 377 PRINTS PR00344 Bacterial sensor protein C-terminal signature 337 355 1.5E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS09085 996c6cd618701b68898604edb314c250 377 SMART SM00387 264 377 2.9E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS09085 996c6cd618701b68898604edb314c250 377 Pfam PF00512 His Kinase A (phospho-acceptor) domain 172 227 6.7E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS09085 996c6cd618701b68898604edb314c250 377 Pfam PF16524 Periplasmic domain of Sensor histidine kinase RisS 2 89 3.3E-22 T 22-04-2016 IPR032408 Sensor histidine kinase RisS, periplasmic domain SCD_RS09085 996c6cd618701b68898604edb314c250 377 Pfam PF00672 HAMP domain 99 164 1.9E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS12530 0074fb88872867a0edc6dfae0a0872a9 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 140 156 1.3E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SCD_RS12530 0074fb88872867a0edc6dfae0a0872a9 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 1.3E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SCD_RS12530 0074fb88872867a0edc6dfae0a0872a9 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 109 122 1.3E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SCD_RS12530 0074fb88872867a0edc6dfae0a0872a9 228 Gene3D G3DSA:3.40.50.1000 89 225 5.1E-44 T 22-04-2016 IPR023214 HAD-like domain SCD_RS12530 0074fb88872867a0edc6dfae0a0872a9 228 Gene3D G3DSA:3.40.50.1000 8 25 5.1E-44 T 22-04-2016 IPR023214 HAD-like domain SCD_RS12530 0074fb88872867a0edc6dfae0a0872a9 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 195 2.7E-34 T 22-04-2016 IPR023214 HAD-like domain SCD_RS12530 0074fb88872867a0edc6dfae0a0872a9 228 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 9 226 34.542 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 SCD_RS12530 0074fb88872867a0edc6dfae0a0872a9 228 ProSitePatterns PS01228 Hypothetical cof family signature 1. 11 22 - T 22-04-2016 IPR000150 Cof protein GO:0016787 SCD_RS12530 0074fb88872867a0edc6dfae0a0872a9 228 PANTHER PTHR18901:SF14 8 226 1.5E-56 T 22-04-2016 SCD_RS12530 0074fb88872867a0edc6dfae0a0872a9 228 PANTHER PTHR18901 8 226 1.5E-56 T 22-04-2016 SCD_RS12530 0074fb88872867a0edc6dfae0a0872a9 228 Gene3D G3DSA:1.10.150.240 26 88 4.8E-22 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SCD_RS12530 0074fb88872867a0edc6dfae0a0872a9 228 SUPERFAMILY SSF56784 8 227 4.4E-60 T 22-04-2016 IPR023214 HAD-like domain SCD_RS12530 0074fb88872867a0edc6dfae0a0872a9 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 85 195 5.7E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SCD_RS12530 0074fb88872867a0edc6dfae0a0872a9 228 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 12 224 5.0E-67 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 SCD_RS12530 0074fb88872867a0edc6dfae0a0872a9 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 110 190 5.1E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SCD_RS11360 d0aed29f0d6f9df41d0c1bdb607a0c6b 217 SUPERFAMILY SSF52540 9 198 3.89E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11360 d0aed29f0d6f9df41d0c1bdb607a0c6b 217 PANTHER PTHR11711 1 189 1.2E-27 T 22-04-2016 SCD_RS11360 d0aed29f0d6f9df41d0c1bdb607a0c6b 217 Gene3D G3DSA:3.40.50.300 10 190 3.3E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11360 d0aed29f0d6f9df41d0c1bdb607a0c6b 217 PANTHER PTHR11711:SF128 1 189 1.2E-27 T 22-04-2016 SCD_RS11360 d0aed29f0d6f9df41d0c1bdb607a0c6b 217 Pfam PF00025 ADP-ribosylation factor family 12 188 5.3E-8 T 22-04-2016 IPR006689 Small GTPase superfamily, ARF/SAR type GO:0005525 SCD_RS12195 02527e746826233bc37cb8e01e52fd67 284 PANTHER PTHR30487:SF0 57 283 9.4E-114 T 22-04-2016 SCD_RS12195 02527e746826233bc37cb8e01e52fd67 284 PANTHER PTHR30487:SF0 1 37 9.4E-114 T 22-04-2016 SCD_RS12195 02527e746826233bc37cb8e01e52fd67 284 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 19 124 2.8E-35 T 22-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SCD_RS12195 02527e746826233bc37cb8e01e52fd67 284 Pfam PF01478 Type IV leader peptidase family 135 243 1.0E-27 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 SCD_RS12195 02527e746826233bc37cb8e01e52fd67 284 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 1.7E-27 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SCD_RS12195 02527e746826233bc37cb8e01e52fd67 284 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 223 238 1.7E-27 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SCD_RS12195 02527e746826233bc37cb8e01e52fd67 284 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 200 210 1.7E-27 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SCD_RS12195 02527e746826233bc37cb8e01e52fd67 284 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 211 222 1.7E-27 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SCD_RS12195 02527e746826233bc37cb8e01e52fd67 284 PANTHER PTHR30487 57 283 9.4E-114 T 22-04-2016 SCD_RS12195 02527e746826233bc37cb8e01e52fd67 284 PANTHER PTHR30487 1 37 9.4E-114 T 22-04-2016 SCD_RS10055 ff915ea1cd0846bd6cb9e744041c5150 267 SUPERFAMILY SSF52540 7 226 1.14E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS10055 ff915ea1cd0846bd6cb9e744041c5150 267 Gene3D G3DSA:3.40.50.300 27 186 2.8E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS10055 ff915ea1cd0846bd6cb9e744041c5150 267 PANTHER PTHR22908 14 255 5.7E-33 T 22-04-2016 SCD_RS10055 ff915ea1cd0846bd6cb9e744041c5150 267 Pfam PF07728 AAA domain (dynein-related subfamily) 36 169 1.8E-29 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 SCD_RS10055 ff915ea1cd0846bd6cb9e744041c5150 267 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 182 264 3.5E-33 T 22-04-2016 IPR013615 CbbQ/NirQ/NorQ, C-terminal SCD_RS03445 91b755d52f92dc11202d74a813699ff3 294 SUPERFAMILY SSF52943 7 291 4.71E-53 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain SCD_RS03445 91b755d52f92dc11202d74a813699ff3 294 Pfam PF00231 ATP synthase 6 291 4.3E-56 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS03445 91b755d52f92dc11202d74a813699ff3 294 Gene3D G3DSA:1.10.287.80 206 239 1.7E-10 T 22-04-2016 SCD_RS03445 91b755d52f92dc11202d74a813699ff3 294 Gene3D G3DSA:1.10.287.80 21 61 1.7E-10 T 22-04-2016 SCD_RS03445 91b755d52f92dc11202d74a813699ff3 294 Gene3D G3DSA:3.40.1380.10 71 192 6.4E-8 T 22-04-2016 SCD_RS03445 91b755d52f92dc11202d74a813699ff3 294 TIGRFAM TIGR03323 alt_F1F0_F1_gam: alternate F1F0 ATPase, F1 subunit gamma 8 291 1.0E-136 T 22-04-2016 IPR017709 Alternate F1F0 ATPase, F1 subunit gamma SCD_RS03445 91b755d52f92dc11202d74a813699ff3 294 PANTHER PTHR11693 8 293 1.9E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS03445 91b755d52f92dc11202d74a813699ff3 294 PRINTS PR00126 ATP synthase gamma subunit signature 269 290 6.9E-15 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS03445 91b755d52f92dc11202d74a813699ff3 294 PRINTS PR00126 ATP synthase gamma subunit signature 75 94 6.9E-15 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS03445 91b755d52f92dc11202d74a813699ff3 294 PRINTS PR00126 ATP synthase gamma subunit signature 238 257 6.9E-15 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS03445 91b755d52f92dc11202d74a813699ff3 294 Gene3D G3DSA:1.10.287.80 240 286 1.3E-18 T 22-04-2016 SCD_RS08450 07a62ea4ed4325be2f0b71ac197d9600 202 SMART SM00858 78 140 6.6E-10 T 22-04-2016 IPR013974 SAF domain SCD_RS08450 07a62ea4ed4325be2f0b71ac197d9600 202 Pfam PF13144 Chaperone for flagella basal body P-ring formation 2 200 7.7E-59 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal SCD_RS08450 07a62ea4ed4325be2f0b71ac197d9600 202 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 66 201 1.0E-40 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal SCD_RS08450 07a62ea4ed4325be2f0b71ac197d9600 202 PANTHER PTHR36307 27 202 9.9E-30 T 22-04-2016 SCD_RS05055 74b63d5dd2b2e93afb7cac09a0f37b99 152 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 61 2.3E-8 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SCD_RS05055 74b63d5dd2b2e93afb7cac09a0f37b99 152 PANTHER PTHR11908 1 139 8.2E-32 T 22-04-2016 SCD_RS05055 74b63d5dd2b2e93afb7cac09a0f37b99 152 Gene3D G3DSA:3.10.20.30 2 73 2.1E-29 T 22-04-2016 IPR012675 Beta-grasp domain SCD_RS05055 74b63d5dd2b2e93afb7cac09a0f37b99 152 PANTHER PTHR11908:SF82 1 139 8.2E-32 T 22-04-2016 SCD_RS05055 74b63d5dd2b2e93afb7cac09a0f37b99 152 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SCD_RS05055 74b63d5dd2b2e93afb7cac09a0f37b99 152 SUPERFAMILY SSF47741 72 150 1.27E-30 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 SCD_RS05055 74b63d5dd2b2e93afb7cac09a0f37b99 152 Gene3D G3DSA:1.10.150.120 74 151 2.4E-30 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 SCD_RS05055 74b63d5dd2b2e93afb7cac09a0f37b99 152 Pfam PF01799 [2Fe-2S] binding domain 72 143 5.5E-26 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 SCD_RS05055 74b63d5dd2b2e93afb7cac09a0f37b99 152 SUPERFAMILY SSF54292 2 76 5.77E-26 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SCD_RS10940 096c4debd0f887f32f9c7a793e41065c 138 Gene3D G3DSA:2.40.50.140 82 132 2.0E-4 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS10940 096c4debd0f887f32f9c7a793e41065c 138 Pfam PF01957 NfeD-like C-terminal, partner-binding 7 133 6.6E-12 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain SCD_RS13180 32d811494ea1db01c29ffabecd752544 397 Gene3D G3DSA:3.90.1150.10 282 392 3.3E-33 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS13180 32d811494ea1db01c29ffabecd752544 397 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 19 390 2.1E-143 T 22-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 SCD_RS13180 32d811494ea1db01c29ffabecd752544 397 Gene3D G3DSA:3.40.640.10 57 281 3.0E-83 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS13180 32d811494ea1db01c29ffabecd752544 397 PANTHER PTHR13693:SF53 6 392 3.4E-166 T 22-04-2016 SCD_RS13180 32d811494ea1db01c29ffabecd752544 397 PANTHER PTHR13693 6 392 3.4E-166 T 22-04-2016 SCD_RS13180 32d811494ea1db01c29ffabecd752544 397 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 2 394 49.474 T 22-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 SCD_RS13180 32d811494ea1db01c29ffabecd752544 397 Pfam PF00155 Aminotransferase class I and II 39 390 3.5E-58 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SCD_RS13180 32d811494ea1db01c29ffabecd752544 397 SUPERFAMILY SSF53383 3 392 6.84E-110 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS13330 1abc7cb59dbf9a00e882b51ca7dbfc91 1069 SUPERFAMILY SSF82714 747 827 1.44E-8 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS13330 1abc7cb59dbf9a00e882b51ca7dbfc91 1069 Gene3D G3DSA:3.30.2090.10 749 827 5.8E-8 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS13330 1abc7cb59dbf9a00e882b51ca7dbfc91 1069 Gene3D G3DSA:3.30.2090.10 189 270 8.0E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS13330 1abc7cb59dbf9a00e882b51ca7dbfc91 1069 PANTHER PTHR32063:SF16 5 1067 0.0 T 22-04-2016 SCD_RS13330 1abc7cb59dbf9a00e882b51ca7dbfc91 1069 SUPERFAMILY SSF82866 309 509 1.02E-38 T 22-04-2016 SCD_RS13330 1abc7cb59dbf9a00e882b51ca7dbfc91 1069 Pfam PF00873 AcrB/AcrD/AcrF family 9 1063 1.1E-155 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS13330 1abc7cb59dbf9a00e882b51ca7dbfc91 1069 SUPERFAMILY SSF82714 189 271 2.09E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS13330 1abc7cb59dbf9a00e882b51ca7dbfc91 1069 PRINTS PR00702 Acriflavin resistance protein family signature 484 507 1.2E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS13330 1abc7cb59dbf9a00e882b51ca7dbfc91 1069 PRINTS PR00702 Acriflavin resistance protein family signature 41 59 1.2E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS13330 1abc7cb59dbf9a00e882b51ca7dbfc91 1069 PRINTS PR00702 Acriflavin resistance protein family signature 459 482 1.2E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS13330 1abc7cb59dbf9a00e882b51ca7dbfc91 1069 PRINTS PR00702 Acriflavin resistance protein family signature 350 373 1.2E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS13330 1abc7cb59dbf9a00e882b51ca7dbfc91 1069 PRINTS PR00702 Acriflavin resistance protein family signature 13 37 1.2E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS13330 1abc7cb59dbf9a00e882b51ca7dbfc91 1069 PRINTS PR00702 Acriflavin resistance protein family signature 404 428 1.2E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS13330 1abc7cb59dbf9a00e882b51ca7dbfc91 1069 Gene3D G3DSA:3.30.70.1430 43 144 7.1E-16 T 22-04-2016 SCD_RS13330 1abc7cb59dbf9a00e882b51ca7dbfc91 1069 SUPERFAMILY SSF82693 581 695 1.41E-12 T 22-04-2016 SCD_RS13330 1abc7cb59dbf9a00e882b51ca7dbfc91 1069 PANTHER PTHR32063 5 1067 0.0 T 22-04-2016 SCD_RS13330 1abc7cb59dbf9a00e882b51ca7dbfc91 1069 SUPERFAMILY SSF82693 43 126 6.54E-17 T 22-04-2016 SCD_RS13330 1abc7cb59dbf9a00e882b51ca7dbfc91 1069 Gene3D G3DSA:1.20.1640.10 304 518 7.3E-46 T 22-04-2016 SCD_RS13330 1abc7cb59dbf9a00e882b51ca7dbfc91 1069 Gene3D G3DSA:3.30.70.1430 586 694 1.2E-12 T 22-04-2016 SCD_RS13330 1abc7cb59dbf9a00e882b51ca7dbfc91 1069 Gene3D G3DSA:1.10.3850.10 836 1063 6.3E-71 T 22-04-2016 SCD_RS13330 1abc7cb59dbf9a00e882b51ca7dbfc91 1069 SUPERFAMILY SSF82866 837 1065 8.11E-42 T 22-04-2016 SCD_RS13330 1abc7cb59dbf9a00e882b51ca7dbfc91 1069 SUPERFAMILY SSF82693 287 341 4.19E-9 T 22-04-2016 SCD_RS13330 1abc7cb59dbf9a00e882b51ca7dbfc91 1069 SUPERFAMILY SSF82693 147 187 4.19E-9 T 22-04-2016 SCD_RS10960 1267e96d9e90d8cb96af095683ef46f3 281 Gene3D G3DSA:3.40.50.620 5 167 9.5E-74 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS10960 1267e96d9e90d8cb96af095683ef46f3 281 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 2 273 1.0E-94 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SCD_RS10960 1267e96d9e90d8cb96af095683ef46f3 281 PANTHER PTHR21299 8 276 1.2E-116 T 22-04-2016 SCD_RS10960 1267e96d9e90d8cb96af095683ef46f3 281 SUPERFAMILY SSF52374 8 275 4.83E-99 T 22-04-2016 SCD_RS10960 1267e96d9e90d8cb96af095683ef46f3 281 Gene3D G3DSA:3.30.1300.10 174 273 1.1E-27 T 22-04-2016 SCD_RS10960 1267e96d9e90d8cb96af095683ef46f3 281 Hamap MF_00158 Pantothenate synthetase [panC]. 2 273 38.584 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SCD_RS10960 1267e96d9e90d8cb96af095683ef46f3 281 Pfam PF02569 Pantoate-beta-alanine ligase 5 271 6.9E-97 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SCD_RS10960 1267e96d9e90d8cb96af095683ef46f3 281 PANTHER PTHR21299:SF1 8 276 1.2E-116 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SCD_RS10960 1267e96d9e90d8cb96af095683ef46f3 281 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 20 65 5.5E-8 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SCD_RS07540 0f6ea4db1d695bb32aaeba4a949385e1 212 SMART SM00248 122 151 2.5E-4 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS07540 0f6ea4db1d695bb32aaeba4a949385e1 212 SMART SM00248 155 184 1.2E-4 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS07540 0f6ea4db1d695bb32aaeba4a949385e1 212 SMART SM00248 57 86 0.37 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS07540 0f6ea4db1d695bb32aaeba4a949385e1 212 SMART SM00248 90 121 0.013 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS07540 0f6ea4db1d695bb32aaeba4a949385e1 212 PRINTS PR01415 Ankyrin repeat signature 123 138 5.7E-5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS07540 0f6ea4db1d695bb32aaeba4a949385e1 212 PRINTS PR01415 Ankyrin repeat signature 171 185 5.7E-5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS07540 0f6ea4db1d695bb32aaeba4a949385e1 212 Pfam PF00023 Ankyrin repeat 155 186 2.6E-5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS07540 0f6ea4db1d695bb32aaeba4a949385e1 212 PANTHER PTHR24198 29 208 6.5E-47 T 22-04-2016 SCD_RS07540 0f6ea4db1d695bb32aaeba4a949385e1 212 Gene3D G3DSA:1.25.40.20 35 209 3.6E-51 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SCD_RS07540 0f6ea4db1d695bb32aaeba4a949385e1 212 Pfam PF12796 Ankyrin repeats (3 copies) 72 151 5.0E-16 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SCD_RS07540 0f6ea4db1d695bb32aaeba4a949385e1 212 SUPERFAMILY SSF48403 28 209 2.36E-49 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SCD_RS05730 020a6694550502778dec773c7b809596 573 SUPERFAMILY SSF48695 80 526 5.09E-96 T 22-04-2016 IPR011031 Multihaem cytochrome SCD_RS05730 020a6694550502778dec773c7b809596 573 Pfam PF11783 Cytochrome c bacterial 351 522 5.2E-68 T 22-04-2016 IPR024673 Octaheme c-type cytochrome SCD_RS05730 020a6694550502778dec773c7b809596 573 Pfam PF13435 Cytochrome c554 and c-prime 265 340 0.019 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SCD_RS05730 020a6694550502778dec773c7b809596 573 Pfam PF13435 Cytochrome c554 and c-prime 94 173 3.3E-4 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SCD_RS05730 020a6694550502778dec773c7b809596 573 PIRSF PIRSF039014 32 573 2.0E-169 T 22-04-2016 IPR024673 Octaheme c-type cytochrome SCD_RS05730 020a6694550502778dec773c7b809596 573 Gene3D G3DSA:1.10.1130.10 269 352 1.3E-11 T 22-04-2016 IPR012286 Tetrahaem cytochrome domain SCD_RS05730 020a6694550502778dec773c7b809596 573 Gene3D G3DSA:1.10.1130.10 516 524 1.3E-11 T 22-04-2016 IPR012286 Tetrahaem cytochrome domain SCD_RS05730 020a6694550502778dec773c7b809596 573 Gene3D G3DSA:1.10.3820.10 84 268 3.1E-12 T 22-04-2016 SCD_RS05730 020a6694550502778dec773c7b809596 573 TIGRFAM TIGR04315 octaheme_Shew: octaheme c-type cytochrome, tetrathionate reductase family 73 533 1.8E-191 T 22-04-2016 IPR024673 Octaheme c-type cytochrome SCD_RS07650 0190e324d679ad3be2783d488680e623 218 Gene3D G3DSA:1.10.150.240 19 75 3.0E-8 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SCD_RS07650 0190e324d679ad3be2783d488680e623 218 SUPERFAMILY SSF56784 5 215 3.31E-57 T 22-04-2016 IPR023214 HAD-like domain SCD_RS07650 0190e324d679ad3be2783d488680e623 218 Gene3D G3DSA:3.40.50.1000 76 215 4.6E-41 T 22-04-2016 IPR023214 HAD-like domain SCD_RS07650 0190e324d679ad3be2783d488680e623 218 PANTHER PTHR18901:SF40 5 214 9.3E-57 T 22-04-2016 SCD_RS07650 0190e324d679ad3be2783d488680e623 218 PANTHER PTHR18901 5 214 9.3E-57 T 22-04-2016 SCD_RS07650 0190e324d679ad3be2783d488680e623 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 185 1.5E-32 T 22-04-2016 IPR023214 HAD-like domain SCD_RS07650 0190e324d679ad3be2783d488680e623 218 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 102 179 5.6E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SCD_RS09145 63cea09b3fe416c271de3d9b78ae4332 292 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.6E-38 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SCD_RS09145 63cea09b3fe416c271de3d9b78ae4332 292 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.6E-38 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SCD_RS09145 63cea09b3fe416c271de3d9b78ae4332 292 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.6E-38 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SCD_RS09145 63cea09b3fe416c271de3d9b78ae4332 292 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.6E-38 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SCD_RS09145 63cea09b3fe416c271de3d9b78ae4332 292 SUPERFAMILY SSF51735 1 122 4.36E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS09145 63cea09b3fe416c271de3d9b78ae4332 292 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 286 9.0E-143 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SCD_RS09145 63cea09b3fe416c271de3d9b78ae4332 292 SUPERFAMILY SSF52210 123 286 9.81E-55 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SCD_RS09145 63cea09b3fe416c271de3d9b78ae4332 292 SMART SM00881 4 100 4.5E-37 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SCD_RS09145 63cea09b3fe416c271de3d9b78ae4332 292 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SCD_RS09145 63cea09b3fe416c271de3d9b78ae4332 292 PANTHER PTHR11117 1 291 3.4E-190 T 22-04-2016 SCD_RS09145 63cea09b3fe416c271de3d9b78ae4332 292 Gene3D G3DSA:3.40.50.261 120 286 2.8E-74 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SCD_RS09145 63cea09b3fe416c271de3d9b78ae4332 292 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site SCD_RS09145 63cea09b3fe416c271de3d9b78ae4332 292 Pfam PF00549 CoA-ligase 151 272 7.5E-20 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SCD_RS09145 63cea09b3fe416c271de3d9b78ae4332 292 PIRSF PIRSF001553 1 291 2.3E-132 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SCD_RS09145 63cea09b3fe416c271de3d9b78ae4332 292 Gene3D G3DSA:3.40.50.720 2 119 7.7E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS09145 63cea09b3fe416c271de3d9b78ae4332 292 Pfam PF02629 CoA binding domain 6 99 1.6E-30 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SCD_RS02575 870259dc2ea936f52ce5f4f20baf3c45 398 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 25 365 3.1E-111 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- SCD_RS02575 870259dc2ea936f52ce5f4f20baf3c45 398 Pfam PF04055 Radical SAM superfamily 29 195 9.9E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SCD_RS02575 870259dc2ea936f52ce5f4f20baf3c45 398 SMART SM00729 24 242 1.9E-48 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SCD_RS02575 870259dc2ea936f52ce5f4f20baf3c45 398 SUPERFAMILY SSF102114 15 396 1.22E-104 T 22-04-2016 SCD_RS02575 870259dc2ea936f52ce5f4f20baf3c45 398 PANTHER PTHR13932:SF7 23 398 1.1E-168 T 22-04-2016 SCD_RS02575 870259dc2ea936f52ce5f4f20baf3c45 398 PANTHER PTHR13932 23 398 1.1E-168 T 22-04-2016 SCD_RS02575 870259dc2ea936f52ce5f4f20baf3c45 398 Gene3D G3DSA:3.80.30.20 25 256 1.4E-30 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SCD_RS02575 870259dc2ea936f52ce5f4f20baf3c45 398 Pfam PF06969 HemN C-terminal domain 323 384 2.0E-13 T 22-04-2016 IPR010723 HemN, C-terminal SCD_RS12650 67579309af0f0584f36f9e9fd62162df 324 Gene3D G3DSA:3.90.1200.10 91 321 6.5E-75 T 22-04-2016 SCD_RS12650 67579309af0f0584f36f9e9fd62162df 324 PANTHER PTHR33540:SF1 10 323 1.1E-116 T 22-04-2016 SCD_RS12650 67579309af0f0584f36f9e9fd62162df 324 SUPERFAMILY SSF56112 5 319 8.8E-61 T 22-04-2016 IPR011009 Protein kinase-like domain SCD_RS12650 67579309af0f0584f36f9e9fd62162df 324 PANTHER PTHR33540 10 323 1.1E-116 T 22-04-2016 SCD_RS12650 67579309af0f0584f36f9e9fd62162df 324 Pfam PF01636 Phosphotransferase enzyme family 23 243 2.1E-33 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase SCD_RS12650 67579309af0f0584f36f9e9fd62162df 324 Gene3D G3DSA:3.30.200.20 2 90 7.4E-32 T 22-04-2016 SCD_RS03000 537566a4fcd4774f1ac4edbe4e1a6841 199 PANTHER PTHR11260 1 198 2.7E-67 T 22-04-2016 SCD_RS03000 537566a4fcd4774f1ac4edbe4e1a6841 199 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 72 5.5E-17 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SCD_RS03000 537566a4fcd4774f1ac4edbe4e1a6841 199 SUPERFAMILY SSF52833 1 101 5.79E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS03000 537566a4fcd4774f1ac4edbe4e1a6841 199 Pfam PF00043 Glutathione S-transferase, C-terminal domain 108 184 1.2E-7 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal SCD_RS03000 537566a4fcd4774f1ac4edbe4e1a6841 199 PANTHER PTHR11260:SF44 1 198 2.7E-67 T 22-04-2016 SCD_RS03000 537566a4fcd4774f1ac4edbe4e1a6841 199 SUPERFAMILY SSF47616 73 197 2.27E-26 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SCD_RS03000 537566a4fcd4774f1ac4edbe4e1a6841 199 Gene3D G3DSA:1.20.1050.10 91 190 2.1E-18 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SCD_RS03000 537566a4fcd4774f1ac4edbe4e1a6841 199 Gene3D G3DSA:3.40.30.10 1 90 6.1E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS06600 503f04bcd174c3fd4c430515ff3cef09 282 PANTHER PTHR35894:SF1 2 264 3.6E-81 T 22-04-2016 SCD_RS06600 503f04bcd174c3fd4c430515ff3cef09 282 Gene3D G3DSA:3.40.50.300 43 182 3.3E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06600 503f04bcd174c3fd4c430515ff3cef09 282 SUPERFAMILY SSF52540 5 261 5.89E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06600 503f04bcd174c3fd4c430515ff3cef09 282 Pfam PF13401 AAA domain 42 170 8.7E-23 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS06600 503f04bcd174c3fd4c430515ff3cef09 282 SMART SM00382 42 194 6.6E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS06600 503f04bcd174c3fd4c430515ff3cef09 282 PANTHER PTHR35894 2 264 3.6E-81 T 22-04-2016 SCD_RS05525 760ebc7fe02e471196dbfed79c3c8f84 127 PANTHER PTHR30204:SF15 11 93 8.7E-28 T 22-04-2016 SCD_RS05525 760ebc7fe02e471196dbfed79c3c8f84 127 Pfam PF13411 MerR HTH family regulatory protein 19 88 9.3E-23 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SCD_RS05525 760ebc7fe02e471196dbfed79c3c8f84 127 SUPERFAMILY SSF46955 17 93 2.7E-18 T 22-04-2016 IPR009061 Putative DNA-binding domain SCD_RS05525 760ebc7fe02e471196dbfed79c3c8f84 127 SMART SM00422 19 89 1.9E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SCD_RS05525 760ebc7fe02e471196dbfed79c3c8f84 127 PANTHER PTHR30204 11 93 8.7E-28 T 22-04-2016 SCD_RS05525 760ebc7fe02e471196dbfed79c3c8f84 127 Gene3D G3DSA:1.10.1660.10 16 87 4.1E-18 T 22-04-2016 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 SUPERFAMILY SSF50341 1017 1149 1.96E-27 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 SMART SM01231 695 832 3.9E-10 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 SMART SM00073 80 177 1.5E-13 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 SMART SM00073 566 662 0.0037 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 SMART SM00073 384 480 0.0073 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 PANTHER PTHR22617:SF20 60 224 2.2E-122 T 22-04-2016 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 Gene3D G3DSA:3.40.50.2300 1174 1294 3.2E-40 T 22-04-2016 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 Gene3D G3DSA:2.30.30.40 1105 1149 8.6E-22 T 22-04-2016 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 Gene3D G3DSA:2.30.30.40 1018 1039 8.6E-22 T 22-04-2016 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 Pfam PF00072 Response regulator receiver domain 1177 1288 7.2E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 SUPERFAMILY SSF55874 834 1016 1.31E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 SUPERFAMILY SSF47226 387 504 1.44E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 Gene3D G3DSA:3.30.565.10 833 1017 8.4E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 PANTHER PTHR22617 562 744 2.2E-122 T 22-04-2016 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 PANTHER PTHR22617 810 1166 2.2E-122 T 22-04-2016 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 PANTHER PTHR22617:SF20 562 744 2.2E-122 T 22-04-2016 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 PANTHER PTHR22617:SF20 810 1166 2.2E-122 T 22-04-2016 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 SMART SM00448 1175 1288 2.9E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 SUPERFAMILY SSF47226 80 190 8.51E-27 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 Pfam PF01627 Hpt domain 569 667 6.3E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 Pfam PF01627 Hpt domain 387 485 2.4E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 Pfam PF01627 Hpt domain 82 175 2.4E-15 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 SUPERFAMILY SSF47226 565 674 1.44E-19 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 882 1017 2.9E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 SMART SM00387 877 1018 7.7E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 PANTHER PTHR22617 60 224 2.2E-122 T 22-04-2016 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 Pfam PF01584 CheW-like domain 1022 1152 1.9E-20 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 Gene3D G3DSA:1.20.120.160 563 674 4.5E-21 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 Gene3D G3DSA:1.20.120.160 387 516 7.7E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 Gene3D G3DSA:1.20.120.160 79 215 3.2E-30 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1002 1015 5.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 PRINTS PR00344 Bacterial sensor protein C-terminal signature 962 972 5.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 PRINTS PR00344 Bacterial sensor protein C-terminal signature 922 936 5.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 PRINTS PR00344 Bacterial sensor protein C-terminal signature 978 996 5.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 SMART SM00260 1010 1150 7.7E-25 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SCD_RS14460 c3fc4d615f18dfa803eb412cfcc28183 1295 SUPERFAMILY SSF52172 1175 1293 6.97E-38 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS15850 35dc8316168dc6b233dd601956138a9e 483 SUPERFAMILY SSF53335 17 191 1.58E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS15850 35dc8316168dc6b233dd601956138a9e 483 SUPERFAMILY SSF53335 278 348 2.28E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS15850 35dc8316168dc6b233dd601956138a9e 483 Pfam PF05050 Methyltransferase FkbM domain 33 178 1.1E-12 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SCD_RS15850 35dc8316168dc6b233dd601956138a9e 483 PANTHER PTHR34009:SF1 17 217 3.9E-12 T 22-04-2016 SCD_RS15850 35dc8316168dc6b233dd601956138a9e 483 Gene3D G3DSA:3.40.50.150 21 194 1.7E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS15850 35dc8316168dc6b233dd601956138a9e 483 Gene3D G3DSA:3.40.50.150 282 347 3.0E-4 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS15850 35dc8316168dc6b233dd601956138a9e 483 PANTHER PTHR34009 17 217 3.9E-12 T 22-04-2016 SCD_RS15850 35dc8316168dc6b233dd601956138a9e 483 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 26 166 1.9E-11 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SCD_RS12165 f03345911fdecac6c3bc30a91b74c7a0 80 Pfam PF00886 Ribosomal protein S16 8 68 3.7E-24 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS12165 f03345911fdecac6c3bc30a91b74c7a0 80 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 22-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS12165 f03345911fdecac6c3bc30a91b74c7a0 80 Gene3D G3DSA:3.30.1320.10 1 78 5.1E-33 T 22-04-2016 IPR023803 Ribosomal protein S16 domain SCD_RS12165 f03345911fdecac6c3bc30a91b74c7a0 80 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.896 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS12165 f03345911fdecac6c3bc30a91b74c7a0 80 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 3.3E-28 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS12165 f03345911fdecac6c3bc30a91b74c7a0 80 SUPERFAMILY SSF54565 1 77 7.85E-29 T 22-04-2016 IPR023803 Ribosomal protein S16 domain SCD_RS12165 f03345911fdecac6c3bc30a91b74c7a0 80 PANTHER PTHR12919 1 78 1.6E-37 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS12560 171eb992b46b721ffbbfc7dc42b566fc 146 PANTHER PTHR30558:SF3 12 140 1.5E-32 T 22-04-2016 SCD_RS12560 171eb992b46b721ffbbfc7dc42b566fc 146 PANTHER PTHR30558 12 140 1.5E-32 T 22-04-2016 SCD_RS12560 171eb992b46b721ffbbfc7dc42b566fc 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 133 5.9E-28 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SCD_RS05735 5de6f69aafe73a5bed9a270119f20748 181 SUPERFAMILY SSF103247 27 141 4.32E-15 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SCD_RS05735 5de6f69aafe73a5bed9a270119f20748 181 Gene3D G3DSA:3.30.310.70 28 143 3.6E-13 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SCD_RS05735 5de6f69aafe73a5bed9a270119f20748 181 Pfam PF03625 Domain of unknown function DUF302 66 124 6.9E-9 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 Gene3D G3DSA:3.30.450.20 647 763 2.4E-24 T 22-04-2016 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 PANTHER PTHR24423:SF491 991 1472 2.6E-195 T 22-04-2016 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 PANTHER PTHR24423:SF491 392 519 2.6E-195 T 22-04-2016 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 PANTHER PTHR24423:SF491 645 733 2.6E-195 T 22-04-2016 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 Gene3D G3DSA:1.20.120.160 1453 1552 4.0E-15 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SUPERFAMILY SSF55785 645 769 1.24E-22 T 22-04-2016 IPR000014 PAS domain SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1242 1260 8.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1207 1221 8.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1266 1279 8.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1225 1235 8.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1166 1279 5.2E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 Pfam PF00672 HAMP domain 320 388 1.1E-17 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 PANTHER PTHR24423 991 1472 2.6E-195 T 22-04-2016 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 PANTHER PTHR24423 392 519 2.6E-195 T 22-04-2016 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 PANTHER PTHR24423 645 733 2.6E-195 T 22-04-2016 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SMART SM00388 1054 1119 6.7E-24 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 Gene3D G3DSA:3.30.565.10 1120 1279 4.4E-48 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SUPERFAMILY SSF52172 1309 1429 9.39E-37 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 Pfam PF02743 Cache domain 36 226 4.1E-13 T 22-04-2016 IPR033479 Double Cache domain 1 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SMART SM00073 1466 1564 0.0079 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 Pfam PF08448 PAS fold 668 777 4.9E-11 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 Pfam PF08448 PAS fold 543 651 4.9E-16 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 Gene3D G3DSA:1.10.287.130 1048 1115 3.6E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 Gene3D G3DSA:3.30.450.20 764 907 4.2E-34 T 22-04-2016 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 Gene3D G3DSA:3.30.450.20 908 1047 1.3E-34 T 22-04-2016 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1054 1119 1.4E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SMART SM00091 412 480 1.3E-5 T 22-04-2016 IPR000014 PAS domain SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SMART SM00091 916 984 1.1E-4 T 22-04-2016 IPR000014 PAS domain SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SMART SM00091 661 728 1.3E-9 T 22-04-2016 IPR000014 PAS domain SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SMART SM00091 788 856 0.13 T 22-04-2016 IPR000014 PAS domain SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SMART SM00091 536 602 8.3E-4 T 22-04-2016 IPR000014 PAS domain SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 Pfam PF08447 PAS fold 812 898 1.4E-18 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 Pfam PF08447 PAS fold 941 1028 1.9E-19 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SMART SM00304 339 391 7.3E-17 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SUPERFAMILY SSF55785 419 527 8.9E-19 T 22-04-2016 IPR000014 PAS domain SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 Pfam PF00072 Response regulator receiver domain 1313 1422 7.3E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SUPERFAMILY SSF55785 798 906 8.54E-18 T 22-04-2016 IPR000014 PAS domain SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SUPERFAMILY SSF55874 1108 1278 2.1E-48 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SUPERFAMILY SSF158472 339 388 4.18E-11 T 22-04-2016 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 Gene3D G3DSA:3.40.50.2300 1309 1438 2.4E-40 T 22-04-2016 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 Pfam PF00989 PAS fold 415 520 5.9E-11 T 22-04-2016 IPR013767 PAS fold GO:0006355 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 Gene3D G3DSA:3.30.450.20 522 646 5.3E-16 T 22-04-2016 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 Gene3D G3DSA:3.30.450.20 399 521 3.9E-16 T 22-04-2016 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SMART SM00448 1311 1424 1.1E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 Pfam PF01627 Hpt domain 1480 1557 8.9E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SUPERFAMILY SSF55785 521 647 6.43E-17 T 22-04-2016 IPR000014 PAS domain SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SUPERFAMILY SSF55785 924 1036 6.46E-21 T 22-04-2016 IPR000014 PAS domain SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SMART SM00086 739 776 9.7 T 22-04-2016 IPR001610 PAC motif SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SMART SM00086 991 1034 8.0E-10 T 22-04-2016 IPR001610 PAC motif SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SMART SM00086 482 524 2.2E-5 T 22-04-2016 IPR001610 PAC motif SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SMART SM00086 862 904 7.8E-7 T 22-04-2016 IPR001610 PAC motif SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 416 528 2.5E-11 T 22-04-2016 IPR000014 PAS domain SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 666 783 3.2E-16 T 22-04-2016 IPR000014 PAS domain SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 836 910 9.1E-7 T 22-04-2016 IPR000014 PAS domain SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 913 1039 7.3E-10 T 22-04-2016 IPR000014 PAS domain SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 539 656 3.6E-10 T 22-04-2016 IPR000014 PAS domain SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SUPERFAMILY SSF47384 1042 1120 5.1E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SUPERFAMILY SSF47226 1453 1560 6.28E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS15505 ab4d56a1df12c03b8205b9393fa9a92a 1650 SMART SM00387 1166 1282 1.3E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS12705 a14b82b5d139da137107c483e1b663a9 307 SUPERFAMILY SSF55681 3 281 1.24E-134 T 22-04-2016 SCD_RS12705 a14b82b5d139da137107c483e1b663a9 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 157 172 1.6E-69 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SCD_RS12705 a14b82b5d139da137107c483e1b663a9 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 56 71 1.6E-69 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SCD_RS12705 a14b82b5d139da137107c483e1b663a9 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 134 154 1.6E-69 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SCD_RS12705 a14b82b5d139da137107c483e1b663a9 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 242 258 1.6E-69 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SCD_RS12705 a14b82b5d139da137107c483e1b663a9 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 77 97 1.6E-69 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SCD_RS12705 a14b82b5d139da137107c483e1b663a9 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 108 132 1.6E-69 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SCD_RS12705 a14b82b5d139da137107c483e1b663a9 307 PANTHER PTHR30075 2 307 1.5E-248 T 22-04-2016 SCD_RS12705 a14b82b5d139da137107c483e1b663a9 307 Gene3D G3DSA:1.20.58.180 206 287 6.4E-37 T 22-04-2016 SCD_RS12705 a14b82b5d139da137107c483e1b663a9 307 Gene3D G3DSA:3.30.930.10 1 204 7.1E-108 T 22-04-2016 SCD_RS12705 a14b82b5d139da137107c483e1b663a9 307 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 4 280 1.4E-151 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SCD_RS12705 a14b82b5d139da137107c483e1b663a9 307 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 2 282 59.944 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SCD_RS12705 a14b82b5d139da137107c483e1b663a9 307 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 3 288 5.4E-157 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SCD_RS08295 3f0ae34859e5b0c01b6695367ebfa86b 303 PANTHER PTHR22911:SF23 14 293 2.6E-21 T 22-04-2016 SCD_RS08295 3f0ae34859e5b0c01b6695367ebfa86b 303 PANTHER PTHR22911 14 293 2.6E-21 T 22-04-2016 SCD_RS08295 3f0ae34859e5b0c01b6695367ebfa86b 303 Pfam PF00892 EamA-like transporter family 19 146 1.9E-7 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SCD_RS08295 3f0ae34859e5b0c01b6695367ebfa86b 303 Pfam PF00892 EamA-like transporter family 160 292 5.5E-10 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SCD_RS08295 3f0ae34859e5b0c01b6695367ebfa86b 303 SUPERFAMILY SSF103481 204 292 1.7E-7 T 22-04-2016 SCD_RS08295 3f0ae34859e5b0c01b6695367ebfa86b 303 SUPERFAMILY SSF103481 56 150 2.22E-10 T 22-04-2016 SCD_RS05170 c08bd18f84421a92e8a4fd956056035b 295 SUPERFAMILY SSF53686 2 293 1.22E-93 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SCD_RS05170 c08bd18f84421a92e8a4fd956056035b 295 Gene3D G3DSA:3.40.50.1100 147 294 4.1E-81 T 22-04-2016 SCD_RS05170 c08bd18f84421a92e8a4fd956056035b 295 Gene3D G3DSA:3.40.50.1100 2 40 4.1E-81 T 22-04-2016 SCD_RS05170 c08bd18f84421a92e8a4fd956056035b 295 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 293 1.1E-123 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 SCD_RS05170 c08bd18f84421a92e8a4fd956056035b 295 TIGRFAM TIGR01138 cysM: cysteine synthase B 5 293 3.0E-140 T 22-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 SCD_RS05170 c08bd18f84421a92e8a4fd956056035b 295 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 SCD_RS05170 c08bd18f84421a92e8a4fd956056035b 295 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 6 282 2.3E-69 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SCD_RS05170 c08bd18f84421a92e8a4fd956056035b 295 Gene3D G3DSA:3.40.50.1100 41 141 1.2E-40 T 22-04-2016 SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 Pfam PF13185 GAF domain 145 290 1.1E-15 T 22-04-2016 IPR003018 GAF domain GO:0005515 SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 Gene3D G3DSA:3.30.70.270 685 849 3.6E-56 T 22-04-2016 SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 679 843 4.8E-41 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 Gene3D G3DSA:3.30.450.40 131 291 3.4E-22 T 22-04-2016 IPR029016 GAF domain-like SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 Pfam PF08447 PAS fold 457 543 6.2E-17 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 Gene3D G3DSA:3.30.450.20 553 666 4.5E-26 T 22-04-2016 SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 SMART SM00086 76 116 32.0 T 22-04-2016 IPR001610 PAC motif SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 SMART SM00086 630 672 0.0072 T 22-04-2016 IPR001610 PAC motif SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 SMART SM00086 383 422 89.0 T 22-04-2016 IPR001610 PAC motif SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 SMART SM00086 508 550 1.9E-6 T 22-04-2016 IPR001610 PAC motif SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 PANTHER PTHR10799 571 954 4.9E-71 T 22-04-2016 SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 Gene3D G3DSA:3.20.20.450 862 1109 2.2E-84 T 22-04-2016 IPR001633 EAL domain SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 Pfam PF13682 Chemoreceptor zinc-binding domain 1139 1203 1.7E-6 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 SUPERFAMILY SSF55785 564 670 7.73E-26 T 22-04-2016 IPR000014 PAS domain SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 Gene3D G3DSA:3.30.450.20 297 413 2.5E-18 T 22-04-2016 SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 SUPERFAMILY SSF55785 16 122 5.03E-23 T 22-04-2016 IPR000014 PAS domain SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 SMART SM00267 672 844 8.3E-68 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 Pfam PF13426 PAS domain 15 115 4.1E-10 T 22-04-2016 IPR000014 PAS domain SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 Pfam PF13426 PAS domain 321 420 1.6E-9 T 22-04-2016 IPR000014 PAS domain SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 Pfam PF13426 PAS domain 569 671 4.3E-14 T 22-04-2016 IPR000014 PAS domain SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 SMART SM00052 854 1101 3.8E-93 T 22-04-2016 IPR001633 EAL domain SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 SUPERFAMILY SSF55785 419 548 6.81E-20 T 22-04-2016 IPR000014 PAS domain SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 PANTHER PTHR10799:SF710 571 954 4.9E-71 T 22-04-2016 SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 Gene3D G3DSA:3.30.450.20 414 552 3.5E-33 T 22-04-2016 SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 Pfam PF00563 EAL domain 862 1096 3.0E-68 T 22-04-2016 IPR001633 EAL domain SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 SUPERFAMILY SSF55785 297 420 1.48E-17 T 22-04-2016 IPR000014 PAS domain SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 SUPERFAMILY SSF55073 688 846 2.43E-50 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 SUPERFAMILY SSF141868 862 1111 1.44E-80 T 22-04-2016 IPR001633 EAL domain SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 SUPERFAMILY SSF55781 146 298 5.45E-17 T 22-04-2016 IPR029016 GAF domain-like SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 Pfam PF00990 Diguanylate cyclase, GGDEF domain 683 839 2.0E-47 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 SMART SM00091 5 71 5.6E-11 T 22-04-2016 IPR000014 PAS domain SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 SMART SM00091 558 624 3.2E-9 T 22-04-2016 IPR000014 PAS domain SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 SMART SM00091 310 380 2.1E-6 T 22-04-2016 IPR000014 PAS domain SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 SMART SM00091 434 502 0.023 T 22-04-2016 IPR000014 PAS domain SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 Gene3D G3DSA:3.30.450.20 7 119 1.5E-21 T 22-04-2016 SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 563 679 3.8E-20 T 22-04-2016 IPR000014 PAS domain SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 122 1.2E-23 T 22-04-2016 IPR000014 PAS domain SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 455 557 1.8E-9 T 22-04-2016 IPR000014 PAS domain SCD_RS15785 d6d0820d9cbb2a2c5530a38e73bb7326 1237 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 308 429 5.6E-17 T 22-04-2016 IPR000014 PAS domain SCD_RS03825 5db1c5b4c2524036befdb4d0c6a986c3 811 PANTHER PTHR10029 441 808 0.0 T 22-04-2016 SCD_RS03825 5db1c5b4c2524036befdb4d0c6a986c3 811 SUPERFAMILY SSF55821 186 404 2.44E-38 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SCD_RS03825 5db1c5b4c2524036befdb4d0c6a986c3 811 Pfam PF07503 HypF finger 169 202 1.0E-17 T 22-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 SCD_RS03825 5db1c5b4c2524036befdb4d0c6a986c3 811 Pfam PF07503 HypF finger 119 151 3.9E-17 T 22-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 SCD_RS03825 5db1c5b4c2524036befdb4d0c6a986c3 811 Pfam PF01300 Telomere recombination 221 405 5.6E-46 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 SCD_RS03825 5db1c5b4c2524036befdb4d0c6a986c3 811 ProSitePatterns PS00150 Acylphosphatase signature 1. 22 32 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SCD_RS03825 5db1c5b4c2524036befdb4d0c6a986c3 811 PIRSF PIRSF006256 14 810 2.1E-286 T 22-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 SCD_RS03825 5db1c5b4c2524036befdb4d0c6a986c3 811 PANTHER PTHR10029:SF4 441 808 0.0 T 22-04-2016 SCD_RS03825 5db1c5b4c2524036befdb4d0c6a986c3 811 Gene3D G3DSA:3.90.870.10 211 404 2.7E-40 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SCD_RS03825 5db1c5b4c2524036befdb4d0c6a986c3 811 Gene3D G3DSA:3.30.70.100 16 99 2.6E-26 T 22-04-2016 SCD_RS03825 5db1c5b4c2524036befdb4d0c6a986c3 811 SUPERFAMILY SSF54975 16 101 1.46E-24 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SCD_RS03825 5db1c5b4c2524036befdb4d0c6a986c3 811 PANTHER PTHR10029:SF4 18 405 0.0 T 22-04-2016 SCD_RS03825 5db1c5b4c2524036befdb4d0c6a986c3 811 PANTHER PTHR10029 18 405 0.0 T 22-04-2016 SCD_RS03825 5db1c5b4c2524036befdb4d0c6a986c3 811 Pfam PF00708 Acylphosphatase 17 100 1.2E-22 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SCD_RS04900 07189536d3bb3618ee973f14584057b1 401 Gene3D G3DSA:3.50.50.60 346 399 5.0E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS04900 07189536d3bb3618ee973f14584057b1 401 Gene3D G3DSA:3.50.50.60 2 190 5.0E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS04900 07189536d3bb3618ee973f14584057b1 401 SUPERFAMILY SSF51905 1 192 4.8E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS04900 07189536d3bb3618ee973f14584057b1 401 SUPERFAMILY SSF51905 344 400 4.8E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS04900 07189536d3bb3618ee973f14584057b1 401 Pfam PF03486 HI0933-like protein 3 399 1.8E-140 T 22-04-2016 SCD_RS04900 07189536d3bb3618ee973f14584057b1 401 PANTHER PTHR10617 337 401 7.3E-114 T 22-04-2016 SCD_RS04900 07189536d3bb3618ee973f14584057b1 401 PANTHER PTHR10617 1 296 7.3E-114 T 22-04-2016 SCD_RS04900 07189536d3bb3618ee973f14584057b1 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 4.7E-6 T 22-04-2016 SCD_RS04900 07189536d3bb3618ee973f14584057b1 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 369 376 4.7E-6 T 22-04-2016 SCD_RS04900 07189536d3bb3618ee973f14584057b1 401 PANTHER PTHR10617:SF103 337 401 7.3E-114 T 22-04-2016 SCD_RS04900 07189536d3bb3618ee973f14584057b1 401 PANTHER PTHR10617:SF103 1 296 7.3E-114 T 22-04-2016 SCD_RS04900 07189536d3bb3618ee973f14584057b1 401 Gene3D G3DSA:1.10.8.260 279 328 4.5E-9 T 22-04-2016 IPR023166 HI0933 insert-like domain SCD_RS04900 07189536d3bb3618ee973f14584057b1 401 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 5 399 4.7E-122 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like SCD_RS04900 07189536d3bb3618ee973f14584057b1 401 Gene3D G3DSA:2.40.30.10 192 278 2.2E-24 T 22-04-2016 SCD_RS04900 07189536d3bb3618ee973f14584057b1 401 SUPERFAMILY SSF160996 193 347 4.97E-35 T 22-04-2016 SCD_RS04900 07189536d3bb3618ee973f14584057b1 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 6.3E-6 T 22-04-2016 SCD_RS04900 07189536d3bb3618ee973f14584057b1 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 354 376 6.3E-6 T 22-04-2016 SCD_RS04900 07189536d3bb3618ee973f14584057b1 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 6.3E-6 T 22-04-2016 SCD_RS13720 2ad1755c496a7aea64195518defe7161 277 SUPERFAMILY SSF69593 25 210 9.29E-27 T 22-04-2016 SCD_RS13720 2ad1755c496a7aea64195518defe7161 277 Pfam PF01553 Acyltransferase 79 191 9.8E-20 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SCD_RS13720 2ad1755c496a7aea64195518defe7161 277 PANTHER PTHR10434 221 258 1.4E-43 T 22-04-2016 SCD_RS13720 2ad1755c496a7aea64195518defe7161 277 PANTHER PTHR10434 22 199 1.4E-43 T 22-04-2016 SCD_RS13720 2ad1755c496a7aea64195518defe7161 277 SMART SM00563 82 194 1.0E-30 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SCD_RS13720 2ad1755c496a7aea64195518defe7161 277 Gene3D G3DSA:3.40.1130.10 81 191 5.4E-12 T 22-04-2016 SCD_RS13720 2ad1755c496a7aea64195518defe7161 277 PANTHER PTHR10434:SF8 221 258 1.4E-43 T 22-04-2016 SCD_RS13720 2ad1755c496a7aea64195518defe7161 277 PANTHER PTHR10434:SF8 22 199 1.4E-43 T 22-04-2016 SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 Gene3D G3DSA:3.40.50.2300 547 667 3.8E-43 T 22-04-2016 SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 Pfam PF00512 His Kinase A (phospho-acceptor) domain 285 350 8.9E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 36 170 9.0E-14 T 22-04-2016 IPR019247 Histidine kinase BarA, N-terminal SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 SMART SM00304 200 252 4.1E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 397 511 2.4E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 SUPERFAMILY SSF47226 646 659 6.54E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 SUPERFAMILY SSF47226 698 793 6.54E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 SUPERFAMILY SSF55874 339 509 2.75E-48 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 Gene3D G3DSA:1.20.120.160 710 797 3.0E-16 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 Gene3D G3DSA:3.30.565.10 351 513 1.4E-48 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 SMART SM00448 549 663 5.1E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 SUPERFAMILY SSF158472 200 249 3.79E-7 T 22-04-2016 SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 SMART SM00388 285 350 1.1E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 Pfam PF00072 Response regulator receiver domain 551 664 8.2E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 SUPERFAMILY SSF47384 271 351 4.32E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 452 1.4E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 466 1.4E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 510 1.4E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 491 1.4E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 Pfam PF00672 HAMP domain 181 248 1.5E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 SUPERFAMILY SSF52172 547 667 5.27E-39 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 Gene3D G3DSA:1.10.287.130 279 346 4.5E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 SMART SM00387 397 513 1.6E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 Pfam PF01627 Hpt domain 721 797 1.0E-7 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 PANTHER PTHR24423 280 706 3.2E-158 T 22-04-2016 SCD_RS10265 49e2421d4e88637d4e29329d9e3de738 809 PANTHER PTHR24423 194 247 3.2E-158 T 22-04-2016 SCD_RS03735 e952367a883e9bf53d2f93bb29be361d 55 Pfam PF00471 Ribosomal protein L33 7 53 2.6E-16 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03735 e952367a883e9bf53d2f93bb29be361d 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 4.9E-25 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03735 e952367a883e9bf53d2f93bb29be361d 55 SUPERFAMILY SSF57829 1 53 4.21E-18 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SCD_RS03735 e952367a883e9bf53d2f93bb29be361d 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 14.084 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03735 e952367a883e9bf53d2f93bb29be361d 55 PANTHER PTHR15238 1 55 5.0E-21 T 22-04-2016 SCD_RS08425 aa1d153f63b0412a12cec2e9c21d9304 549 Pfam PF00460 Flagella basal body rod protein 3 33 4.9E-9 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SCD_RS08425 aa1d153f63b0412a12cec2e9c21d9304 549 SUPERFAMILY SSF117143 281 510 4.71E-36 T 22-04-2016 SCD_RS08425 aa1d153f63b0412a12cec2e9c21d9304 549 PANTHER PTHR30435:SF1 1 123 2.1E-94 T 22-04-2016 SCD_RS08425 aa1d153f63b0412a12cec2e9c21d9304 549 PANTHER PTHR30435:SF1 427 549 2.1E-94 T 22-04-2016 SCD_RS08425 aa1d153f63b0412a12cec2e9c21d9304 549 SUPERFAMILY SSF117143 79 248 7.98E-34 T 22-04-2016 SCD_RS08425 aa1d153f63b0412a12cec2e9c21d9304 549 Pfam PF07559 Flagellar basal body protein FlaE 182 430 5.8E-27 T 22-04-2016 IPR011491 Flagellar hook protein FlgE SCD_RS08425 aa1d153f63b0412a12cec2e9c21d9304 549 PANTHER PTHR30435 1 123 2.1E-94 T 22-04-2016 SCD_RS08425 aa1d153f63b0412a12cec2e9c21d9304 549 PANTHER PTHR30435 427 549 2.1E-94 T 22-04-2016 SCD_RS08425 aa1d153f63b0412a12cec2e9c21d9304 549 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 247 9.9E-51 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SCD_RS08425 aa1d153f63b0412a12cec2e9c21d9304 549 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 283 531 3.9E-46 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SCD_RS08425 aa1d153f63b0412a12cec2e9c21d9304 549 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 470 548 1.5E-19 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SCD_RS11995 7b6d4ac3154855ffe51b3f07b1625182 662 PANTHER PTHR10357:SF137 166 662 2.4E-215 T 22-04-2016 SCD_RS11995 7b6d4ac3154855ffe51b3f07b1625182 662 PANTHER PTHR10357:SF137 13 136 2.4E-215 T 22-04-2016 SCD_RS11995 7b6d4ac3154855ffe51b3f07b1625182 662 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 10 650 46.562 T 22-04-2016 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16 SCD_RS11995 7b6d4ac3154855ffe51b3f07b1625182 662 Gene3D G3DSA:2.60.40.1180 562 640 1.6E-6 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta SCD_RS11995 7b6d4ac3154855ffe51b3f07b1625182 662 Pfam PF11896 Domain of unknown function (DUF3416) 13 193 3.7E-55 T 22-04-2016 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16 SCD_RS11995 7b6d4ac3154855ffe51b3f07b1625182 662 SUPERFAMILY SSF51445 180 556 1.21E-80 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SCD_RS11995 7b6d4ac3154855ffe51b3f07b1625182 662 SUPERFAMILY SSF51011 562 644 2.16E-5 T 22-04-2016 SCD_RS11995 7b6d4ac3154855ffe51b3f07b1625182 662 Gene3D G3DSA:3.20.20.80 65 139 1.1E-67 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SCD_RS11995 7b6d4ac3154855ffe51b3f07b1625182 662 Gene3D G3DSA:3.20.20.80 172 554 1.1E-67 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SCD_RS11995 7b6d4ac3154855ffe51b3f07b1625182 662 PANTHER PTHR10357 166 662 2.4E-215 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SCD_RS11995 7b6d4ac3154855ffe51b3f07b1625182 662 PANTHER PTHR10357 13 136 2.4E-215 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SCD_RS11995 7b6d4ac3154855ffe51b3f07b1625182 662 SMART SM00642 200 549 2.4E-4 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SCD_RS11995 7b6d4ac3154855ffe51b3f07b1625182 662 Pfam PF00128 Alpha amylase, catalytic domain 217 321 3.8E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SCD_RS10400 d10cb5a2e580275a100ee9835f340bd3 533 PANTHER PTHR24423 200 526 2.9E-81 T 22-04-2016 SCD_RS10400 d10cb5a2e580275a100ee9835f340bd3 533 PANTHER PTHR24423 8 16 2.9E-81 T 22-04-2016 SCD_RS10400 d10cb5a2e580275a100ee9835f340bd3 533 Gene3D G3DSA:3.30.565.10 384 526 1.6E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS10400 d10cb5a2e580275a100ee9835f340bd3 533 SMART SM00387 424 532 1.3E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS10400 d10cb5a2e580275a100ee9835f340bd3 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 478 1.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS10400 d10cb5a2e580275a100ee9835f340bd3 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 492 1.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS10400 d10cb5a2e580275a100ee9835f340bd3 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 511 1.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS10400 d10cb5a2e580275a100ee9835f340bd3 533 SUPERFAMILY SSF55785 196 275 7.99E-6 T 22-04-2016 IPR000014 PAS domain SCD_RS10400 d10cb5a2e580275a100ee9835f340bd3 533 SMART SM00388 317 383 7.3E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS10400 d10cb5a2e580275a100ee9835f340bd3 533 SUPERFAMILY SSF47384 307 381 3.34E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS10400 d10cb5a2e580275a100ee9835f340bd3 533 Gene3D G3DSA:3.30.450.20 205 303 1.4E-5 T 22-04-2016 SCD_RS10400 d10cb5a2e580275a100ee9835f340bd3 533 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 426 525 9.6E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS10400 d10cb5a2e580275a100ee9835f340bd3 533 Gene3D G3DSA:1.10.287.130 309 379 1.0E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS10400 d10cb5a2e580275a100ee9835f340bd3 533 PANTHER PTHR24423:SF483 200 526 2.9E-81 T 22-04-2016 SCD_RS10400 d10cb5a2e580275a100ee9835f340bd3 533 PANTHER PTHR24423:SF483 8 16 2.9E-81 T 22-04-2016 SCD_RS10400 d10cb5a2e580275a100ee9835f340bd3 533 SUPERFAMILY SSF55874 389 526 9.95E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS10400 d10cb5a2e580275a100ee9835f340bd3 533 Pfam PF00512 His Kinase A (phospho-acceptor) domain 317 381 2.0E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS10400 d10cb5a2e580275a100ee9835f340bd3 533 Pfam PF00989 PAS fold 206 276 5.7E-6 T 22-04-2016 IPR013767 PAS fold GO:0006355 SCD_RS07185 7465afb5a5b6e46265f2c2bae4a0fda7 209 SUPERFAMILY SSF48498 84 199 4.73E-17 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SCD_RS07185 7465afb5a5b6e46265f2c2bae4a0fda7 209 Gene3D G3DSA:1.10.10.60 11 63 5.0E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS07185 7465afb5a5b6e46265f2c2bae4a0fda7 209 SUPERFAMILY SSF46689 5 88 1.95E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS07185 7465afb5a5b6e46265f2c2bae4a0fda7 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 7.7E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SCD_RS07185 7465afb5a5b6e46265f2c2bae4a0fda7 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 7.7E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SCD_RS07185 7465afb5a5b6e46265f2c2bae4a0fda7 209 Gene3D G3DSA:1.10.357.10 64 199 4.1E-20 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SCD_RS07185 7465afb5a5b6e46265f2c2bae4a0fda7 209 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 59 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SCD_RS07185 7465afb5a5b6e46265f2c2bae4a0fda7 209 PANTHER PTHR30055 1 173 1.1E-26 T 22-04-2016 SCD_RS07185 7465afb5a5b6e46265f2c2bae4a0fda7 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 1.3E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SCD_RS10610 3e2a8dfb87821f0d376da7e7b4f68028 306 PANTHER PTHR11562:SF17 5 306 1.1E-90 T 22-04-2016 SCD_RS10610 3e2a8dfb87821f0d376da7e7b4f68028 306 SUPERFAMILY SSF161111 21 216 2.35E-49 T 22-04-2016 SCD_RS10610 3e2a8dfb87821f0d376da7e7b4f68028 306 Pfam PF01545 Cation efflux family 26 214 5.6E-40 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SCD_RS10610 3e2a8dfb87821f0d376da7e7b4f68028 306 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 23 294 4.8E-79 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SCD_RS10610 3e2a8dfb87821f0d376da7e7b4f68028 306 PANTHER PTHR11562 5 306 1.1E-90 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SCD_RS10610 3e2a8dfb87821f0d376da7e7b4f68028 306 SUPERFAMILY SSF160240 224 293 1.7E-8 T 22-04-2016 SCD_RS10610 3e2a8dfb87821f0d376da7e7b4f68028 306 Gene3D G3DSA:1.20.1510.10 23 213 2.3E-50 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain SCD_RS14360 043682aaf8074db0c9a1253e44637dca 720 SUPERFAMILY SSF55729 361 499 1.03E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS14360 043682aaf8074db0c9a1253e44637dca 720 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 1 299 1.0E-96 T 22-04-2016 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase SCD_RS14360 043682aaf8074db0c9a1253e44637dca 720 SUPERFAMILY SSF53756 16 356 1.66E-13 T 22-04-2016 SCD_RS14360 043682aaf8074db0c9a1253e44637dca 720 Gene3D G3DSA:3.40.50.2000 184 337 4.3E-13 T 22-04-2016 SCD_RS14360 043682aaf8074db0c9a1253e44637dca 720 PANTHER PTHR11138:SF0 555 712 3.9E-12 T 22-04-2016 SCD_RS14360 043682aaf8074db0c9a1253e44637dca 720 SUPERFAMILY SSF53328 547 664 2.62E-20 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS14360 043682aaf8074db0c9a1253e44637dca 720 Gene3D G3DSA:3.40.50.2000 15 105 9.7E-5 T 22-04-2016 SCD_RS14360 043682aaf8074db0c9a1253e44637dca 720 Gene3D G3DSA:3.40.630.30 361 498 2.9E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS14360 043682aaf8074db0c9a1253e44637dca 720 Pfam PF13302 Acetyltransferase (GNAT) domain 367 494 3.6E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SCD_RS14360 043682aaf8074db0c9a1253e44637dca 720 Gene3D G3DSA:3.40.50.170 549 662 7.9E-17 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS14360 043682aaf8074db0c9a1253e44637dca 720 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 193 319 3.8E-6 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SCD_RS14360 043682aaf8074db0c9a1253e44637dca 720 PANTHER PTHR11138 555 712 3.9E-12 T 22-04-2016 SCD_RS14360 043682aaf8074db0c9a1253e44637dca 720 Pfam PF00551 Formyl transferase 550 632 8.9E-8 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS04175 dbd1c4df9e039675fa31142caf292a33 196 PIRSF PIRSF000498 1 196 3.5E-73 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SCD_RS04175 dbd1c4df9e039675fa31142caf292a33 196 SUPERFAMILY SSF63380 92 192 8.5E-35 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SCD_RS04175 dbd1c4df9e039675fa31142caf292a33 196 SUPERFAMILY SSF63380 1 91 1.11E-20 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SCD_RS04175 dbd1c4df9e039675fa31142caf292a33 196 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 193 3.5E-61 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SCD_RS04175 dbd1c4df9e039675fa31142caf292a33 196 PANTHER PTHR21098 1 192 1.5E-90 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SCD_RS04175 dbd1c4df9e039675fa31142caf292a33 196 Gene3D G3DSA:2.40.30.20 5 102 1.7E-26 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS04175 dbd1c4df9e039675fa31142caf292a33 196 Gene3D G3DSA:2.40.30.20 103 192 5.6E-35 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS04175 dbd1c4df9e039675fa31142caf292a33 196 Pfam PF00677 Lumazine binding domain 98 182 2.9E-23 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SCD_RS04175 dbd1c4df9e039675fa31142caf292a33 196 Pfam PF00677 Lumazine binding domain 3 85 4.3E-16 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SCD_RS03100 7888d048c6c05fd433ae116244f2b440 102 SMART SM01403 7 101 8.1E-54 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SCD_RS03100 7888d048c6c05fd433ae116244f2b440 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.977 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SCD_RS03100 7888d048c6c05fd433ae116244f2b440 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.2E-44 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SCD_RS03100 7888d048c6c05fd433ae116244f2b440 102 PANTHER PTHR11700 1 102 1.6E-46 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SCD_RS03100 7888d048c6c05fd433ae116244f2b440 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03100 7888d048c6c05fd433ae116244f2b440 102 SUPERFAMILY SSF54999 5 102 1.57E-36 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SCD_RS03100 7888d048c6c05fd433ae116244f2b440 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 8.9E-34 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SCD_RS03100 7888d048c6c05fd433ae116244f2b440 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.3E-16 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SCD_RS03100 7888d048c6c05fd433ae116244f2b440 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.3E-16 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SCD_RS03100 7888d048c6c05fd433ae116244f2b440 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.3E-16 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SCD_RS03100 7888d048c6c05fd433ae116244f2b440 102 Gene3D G3DSA:3.30.70.600 4 102 7.1E-41 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 SUPERFAMILY SSF55785 56 178 6.44E-16 T 22-04-2016 IPR000014 PAS domain SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 SUPERFAMILY SSF55785 200 311 1.31E-25 T 22-04-2016 IPR000014 PAS domain SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 Pfam PF00989 PAS fold 447 549 4.3E-14 T 22-04-2016 IPR013767 PAS fold GO:0006355 SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 Pfam PF00989 PAS fold 194 305 1.7E-12 T 22-04-2016 IPR013767 PAS fold GO:0006355 SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 Pfam PF00989 PAS fold 320 428 1.9E-14 T 22-04-2016 IPR013767 PAS fold GO:0006355 SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 Gene3D G3DSA:3.20.20.450 743 991 1.6E-96 T 22-04-2016 IPR001633 EAL domain SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 SMART SM00267 552 729 1.0E-58 T 22-04-2016 IPR000160 GGDEF domain SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 SUPERFAMILY SSF55785 305 429 3.7E-31 T 22-04-2016 IPR000014 PAS domain SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 Pfam PF00563 EAL domain 746 980 3.4E-71 T 22-04-2016 IPR001633 EAL domain SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 SUPERFAMILY SSF55785 447 549 1.1E-28 T 22-04-2016 IPR000014 PAS domain SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 Pfam PF13426 PAS domain 82 181 3.7E-5 T 22-04-2016 IPR000014 PAS domain SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 560 727 1.6E-40 T 22-04-2016 IPR000160 GGDEF domain SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 SMART SM00086 266 308 1.4E-9 T 22-04-2016 IPR001610 PAC motif SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 SMART SM00086 391 431 100.0 T 22-04-2016 IPR001610 PAC motif SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 SMART SM00086 141 182 160.0 T 22-04-2016 IPR001610 PAC motif SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 SMART SM00086 510 552 2.6E-4 T 22-04-2016 IPR001610 PAC motif SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 SMART SM00091 69 135 0.062 T 22-04-2016 IPR000014 PAS domain SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 SMART SM00091 320 386 1.3E-12 T 22-04-2016 IPR000014 PAS domain SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 SMART SM00091 438 504 1.8E-6 T 22-04-2016 IPR000014 PAS domain SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 SMART SM00091 194 260 2.2E-6 T 22-04-2016 IPR000014 PAS domain SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 Gene3D G3DSA:3.30.70.270 564 735 1.0E-53 T 22-04-2016 SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 Gene3D G3DSA:3.30.450.20 187 305 2.1E-31 T 22-04-2016 SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 SUPERFAMILY SSF141868 744 990 2.75E-89 T 22-04-2016 IPR001633 EAL domain SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 SUPERFAMILY SSF55073 568 731 1.57E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 191 314 4.3E-23 T 22-04-2016 IPR000014 PAS domain SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 442 558 9.9E-20 T 22-04-2016 IPR000014 PAS domain SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 316 438 1.3E-24 T 22-04-2016 IPR000014 PAS domain SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 65 186 4.1E-10 T 22-04-2016 IPR000014 PAS domain SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 Pfam PF00990 Diguanylate cyclase, GGDEF domain 563 725 7.6E-48 T 22-04-2016 IPR000160 GGDEF domain SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 Gene3D G3DSA:3.30.450.20 56 176 6.3E-16 T 22-04-2016 SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 PANTHER PTHR33121 689 991 2.6E-69 T 22-04-2016 SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 PANTHER PTHR33121 39 65 2.6E-69 T 22-04-2016 SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 SMART SM00052 739 985 8.2E-118 T 22-04-2016 IPR001633 EAL domain SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 Gene3D G3DSA:3.30.450.20 306 429 6.7E-32 T 22-04-2016 SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 PANTHER PTHR33121:SF13 689 991 2.6E-69 T 22-04-2016 SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 PANTHER PTHR33121:SF13 39 65 2.6E-69 T 22-04-2016 SCD_RS03410 36c9b2c6f93d9ccf6887df79d5febcdd 997 Gene3D G3DSA:3.30.450.20 447 551 3.8E-28 T 22-04-2016 SCD_RS03400 fedc6c537f0d70fffafec6e98bd628a1 763 Pfam PF00005 ABC transporter 521 669 1.8E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS03400 fedc6c537f0d70fffafec6e98bd628a1 763 ProSitePatterns PS00211 ABC transporters family signature. 641 655 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS03400 fedc6c537f0d70fffafec6e98bd628a1 763 SUPERFAMILY SSF52540 494 739 8.74E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03400 fedc6c537f0d70fffafec6e98bd628a1 763 PANTHER PTHR24221 167 749 1.2E-231 T 22-04-2016 SCD_RS03400 fedc6c537f0d70fffafec6e98bd628a1 763 Gene3D G3DSA:1.20.1560.10 170 484 3.6E-83 T 22-04-2016 SCD_RS03400 fedc6c537f0d70fffafec6e98bd628a1 763 SUPERFAMILY SSF90123 170 484 1.57E-76 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SCD_RS03400 fedc6c537f0d70fffafec6e98bd628a1 763 SMART SM00382 529 715 1.3E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS03400 fedc6c537f0d70fffafec6e98bd628a1 763 Pfam PF00664 ABC transporter transmembrane region 183 456 4.1E-45 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SCD_RS03400 fedc6c537f0d70fffafec6e98bd628a1 763 Gene3D G3DSA:3.40.50.300 505 734 7.1E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13010 2980fcb1c437859201d96396e6e2a818 271 SUPERFAMILY SSF81624 2 136 4.32E-41 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SCD_RS13010 2980fcb1c437859201d96396e6e2a818 271 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 4.6E-32 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SCD_RS13010 2980fcb1c437859201d96396e6e2a818 271 PANTHER PTHR22993 1 271 6.6E-122 T 22-04-2016 SCD_RS13010 2980fcb1c437859201d96396e6e2a818 271 SMART SM00898 2 116 1.9E-52 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SCD_RS13010 2980fcb1c437859201d96396e6e2a818 271 ProSitePatterns PS01242 Zinc finger FPG-type signature. 246 270 - T 22-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 SCD_RS13010 2980fcb1c437859201d96396e6e2a818 271 Pfam PF06827 Zinc finger found in FPG and IleRS 243 271 1.2E-10 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type SCD_RS13010 2980fcb1c437859201d96396e6e2a818 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 131 220 4.4E-22 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 SCD_RS13010 2980fcb1c437859201d96396e6e2a818 271 SUPERFAMILY SSF57716 219 271 1.28E-16 T 22-04-2016 SCD_RS13010 2980fcb1c437859201d96396e6e2a818 271 SMART SM01232 131 223 5.8E-44 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 SCD_RS13010 2980fcb1c437859201d96396e6e2a818 271 SUPERFAMILY SSF46946 132 224 3.66E-28 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SCD_RS13010 2980fcb1c437859201d96396e6e2a818 271 Gene3D G3DSA:1.10.8.50 132 271 4.7E-49 T 22-04-2016 SCD_RS13010 2980fcb1c437859201d96396e6e2a818 271 PANTHER PTHR22993:SF15 1 271 6.6E-122 T 22-04-2016 SCD_RS13010 2980fcb1c437859201d96396e6e2a818 271 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 270 1.5E-89 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 SCD_RS13010 2980fcb1c437859201d96396e6e2a818 271 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 271 43.111 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 SCD_RS13010 2980fcb1c437859201d96396e6e2a818 271 Gene3D G3DSA:3.20.190.10 2 131 8.9E-39 T 22-04-2016 SCD_RS08310 d906d76cfad7fbef86ba0aa969dd97bd 593 Gene3D G3DSA:3.40.50.620 225 384 2.1E-79 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS08310 d906d76cfad7fbef86ba0aa969dd97bd 593 Gene3D G3DSA:3.40.50.620 437 587 2.1E-79 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS08310 d906d76cfad7fbef86ba0aa969dd97bd 593 TIGRFAM TIGR03104 trio_amidotrans: asparagine synthase family amidotransferase 1 587 2.3E-294 T 22-04-2016 IPR017535 Asparagine synthase family amidotransferase SCD_RS08310 d906d76cfad7fbef86ba0aa969dd97bd 593 SUPERFAMILY SSF52402 442 568 4.71E-70 T 22-04-2016 SCD_RS08310 d906d76cfad7fbef86ba0aa969dd97bd 593 SUPERFAMILY SSF52402 231 388 4.71E-70 T 22-04-2016 SCD_RS08310 d906d76cfad7fbef86ba0aa969dd97bd 593 Gene3D G3DSA:3.60.20.10 1 224 4.7E-73 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SCD_RS08310 d906d76cfad7fbef86ba0aa969dd97bd 593 Pfam PF00733 Asparagine synthase 244 587 8.7E-82 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 SCD_RS08310 d906d76cfad7fbef86ba0aa969dd97bd 593 PANTHER PTHR11772 434 524 4.7E-160 T 22-04-2016 SCD_RS08310 d906d76cfad7fbef86ba0aa969dd97bd 593 PANTHER PTHR11772 2 390 4.7E-160 T 22-04-2016 SCD_RS08310 d906d76cfad7fbef86ba0aa969dd97bd 593 SUPERFAMILY SSF56235 1 225 1.37E-62 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SCD_RS08310 d906d76cfad7fbef86ba0aa969dd97bd 593 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 520 8.1E-133 T 22-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 SCD_RS08310 d906d76cfad7fbef86ba0aa969dd97bd 593 PIRSF PIRSF001589 1 592 1.2E-193 T 22-04-2016 SCD_RS08310 d906d76cfad7fbef86ba0aa969dd97bd 593 Pfam PF13537 Glutamine amidotransferase domain 47 167 4.9E-45 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SCD_RS08310 d906d76cfad7fbef86ba0aa969dd97bd 593 PANTHER PTHR11772:SF10 434 524 4.7E-160 T 22-04-2016 SCD_RS08310 d906d76cfad7fbef86ba0aa969dd97bd 593 PANTHER PTHR11772:SF10 2 390 4.7E-160 T 22-04-2016 SCD_RS08040 6f4f6a9728e5eb6b3676e22d8c7a5212 144 Gene3D G3DSA:3.10.129.10 1 141 7.3E-57 T 22-04-2016 IPR029069 HotDog domain SCD_RS08040 6f4f6a9728e5eb6b3676e22d8c7a5212 144 PANTHER PTHR30272 1 144 3.4E-77 T 22-04-2016 SCD_RS08040 6f4f6a9728e5eb6b3676e22d8c7a5212 144 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 1 140 5.9E-60 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SCD_RS08040 6f4f6a9728e5eb6b3676e22d8c7a5212 144 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 1 143 35.2 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SCD_RS08040 6f4f6a9728e5eb6b3676e22d8c7a5212 144 Pfam PF07977 FabA-like domain 10 136 3.5E-38 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SCD_RS08040 6f4f6a9728e5eb6b3676e22d8c7a5212 144 SUPERFAMILY SSF54637 1 141 2.44E-49 T 22-04-2016 IPR029069 HotDog domain SCD_RS07925 58fa411a6e514dee2f513f8f88e02959 180 PANTHER PTHR11995 1 102 8.4E-40 T 22-04-2016 SCD_RS07925 58fa411a6e514dee2f513f8f88e02959 180 PANTHER PTHR11995 135 176 8.4E-40 T 22-04-2016 SCD_RS07925 58fa411a6e514dee2f513f8f88e02959 180 Gene3D G3DSA:3.40.50.700 4 173 3.8E-29 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SCD_RS07925 58fa411a6e514dee2f513f8f88e02959 180 SUPERFAMILY SSF56770 5 178 8.11E-40 T 22-04-2016 SCD_RS07925 58fa411a6e514dee2f513f8f88e02959 180 PANTHER PTHR11995:SF6 1 102 8.4E-40 T 22-04-2016 SCD_RS07925 58fa411a6e514dee2f513f8f88e02959 180 PANTHER PTHR11995:SF6 135 176 8.4E-40 T 22-04-2016 SCD_RS07925 58fa411a6e514dee2f513f8f88e02959 180 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 16 163 1.1E-31 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SCD_RS10280 5121d545676c48725720a84f510a2cc7 678 Pfam PF07715 TonB-dependent Receptor Plug Domain 25 137 1.8E-20 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SCD_RS10280 5121d545676c48725720a84f510a2cc7 678 PANTHER PTHR32552:SF31 508 657 6.4E-40 T 22-04-2016 SCD_RS10280 5121d545676c48725720a84f510a2cc7 678 SUPERFAMILY SSF56935 513 676 8.06E-82 T 22-04-2016 SCD_RS10280 5121d545676c48725720a84f510a2cc7 678 SUPERFAMILY SSF56935 17 483 8.06E-82 T 22-04-2016 SCD_RS10280 5121d545676c48725720a84f510a2cc7 678 PANTHER PTHR32552 209 423 6.4E-40 T 22-04-2016 SCD_RS10280 5121d545676c48725720a84f510a2cc7 678 Gene3D G3DSA:2.40.170.20 140 676 8.5E-53 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SCD_RS10280 5121d545676c48725720a84f510a2cc7 678 Pfam PF00593 TonB dependent receptor 389 676 5.0E-21 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SCD_RS10280 5121d545676c48725720a84f510a2cc7 678 PANTHER PTHR32552:SF31 209 423 6.4E-40 T 22-04-2016 SCD_RS10280 5121d545676c48725720a84f510a2cc7 678 PANTHER PTHR32552:SF31 441 484 6.4E-40 T 22-04-2016 SCD_RS10280 5121d545676c48725720a84f510a2cc7 678 PANTHER PTHR32552 441 484 6.4E-40 T 22-04-2016 SCD_RS10280 5121d545676c48725720a84f510a2cc7 678 PANTHER PTHR32552 508 657 6.4E-40 T 22-04-2016 SCD_RS10280 5121d545676c48725720a84f510a2cc7 678 PANTHER PTHR32552 19 192 6.4E-40 T 22-04-2016 SCD_RS10280 5121d545676c48725720a84f510a2cc7 678 PANTHER PTHR32552:SF31 19 192 6.4E-40 T 22-04-2016 SCD_RS10280 5121d545676c48725720a84f510a2cc7 678 Gene3D G3DSA:2.170.130.10 12 139 3.4E-29 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SCD_RS13140 4fa155b45869436e7b99479c9caec8df 67 Pfam PF11137 Protein of unknown function (DUF2909) 3 62 1.2E-22 T 22-04-2016 IPR021313 Protein of unknown function DUF2909 SCD_RS07885 08accda9db23c2828652e4ffbe8dbbed 201 PANTHER PTHR34478 1 197 7.1E-99 T 22-04-2016 SCD_RS07885 08accda9db23c2828652e4ffbe8dbbed 201 Gene3D G3DSA:1.20.1440.20 14 194 3.3E-67 T 22-04-2016 IPR023353 LemA-like domain SCD_RS07885 08accda9db23c2828652e4ffbe8dbbed 201 Pfam PF04011 LemA family 6 194 2.6E-69 T 22-04-2016 IPR007156 LemA SCD_RS07885 08accda9db23c2828652e4ffbe8dbbed 201 SUPERFAMILY SSF140478 24 181 1.09E-55 T 22-04-2016 IPR023353 LemA-like domain SCD_RS07885 08accda9db23c2828652e4ffbe8dbbed 201 PANTHER PTHR34478:SF2 1 197 7.1E-99 T 22-04-2016 SCD_RS05920 634ddb5ecf913013cee933bc648846a8 417 Gene3D G3DSA:1.10.443.10 229 380 1.4E-17 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SCD_RS05920 634ddb5ecf913013cee933bc648846a8 417 SUPERFAMILY SSF56349 96 390 2.53E-42 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SCD_RS05920 634ddb5ecf913013cee933bc648846a8 417 PANTHER PTHR30629 2 395 1.4E-46 T 22-04-2016 SCD_RS05920 634ddb5ecf913013cee933bc648846a8 417 Gene3D G3DSA:1.10.150.130 96 190 7.9E-5 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SCD_RS05920 634ddb5ecf913013cee933bc648846a8 417 Pfam PF00589 Phage integrase family 226 379 4.8E-12 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SCD_RS05920 634ddb5ecf913013cee933bc648846a8 417 Pfam PF13356 Domain of unknown function (DUF4102) 10 87 6.4E-12 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 SCD_RS09015 f420d660b74d063289d76021e689cc3c 322 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 8.6E-154 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SCD_RS09015 f420d660b74d063289d76021e689cc3c 322 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 51.19 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SCD_RS09015 f420d660b74d063289d76021e689cc3c 322 Gene3D G3DSA:3.90.226.10 62 271 2.5E-50 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SCD_RS09015 f420d660b74d063289d76021e689cc3c 322 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 3.5E-68 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SCD_RS09015 f420d660b74d063289d76021e689cc3c 322 PANTHER PTHR22855 1 318 4.6E-129 T 22-04-2016 SCD_RS09015 f420d660b74d063289d76021e689cc3c 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 2.4E-48 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SCD_RS09015 f420d660b74d063289d76021e689cc3c 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 2.4E-48 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SCD_RS09015 f420d660b74d063289d76021e689cc3c 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 2.4E-48 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SCD_RS09015 f420d660b74d063289d76021e689cc3c 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 2.4E-48 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SCD_RS09015 f420d660b74d063289d76021e689cc3c 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 2.4E-48 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SCD_RS09015 f420d660b74d063289d76021e689cc3c 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 2.4E-48 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SCD_RS09015 f420d660b74d063289d76021e689cc3c 322 SUPERFAMILY SSF52096 5 316 2.26E-105 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SCD_RS09015 f420d660b74d063289d76021e689cc3c 322 PANTHER PTHR22855:SF42 1 318 4.6E-129 T 22-04-2016 SCD_RS02225 0f5297e3be1c8f0478780f042cd5df84 84 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 9 78 8.0E-33 T 22-04-2016 IPR018720 Domain of unknown function DUF2249 SCD_RS00855 d12546be260c2c461c4c2dcc22438a1c 414 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 411 41.87 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SCD_RS00855 d12546be260c2c461c4c2dcc22438a1c 414 Gene3D G3DSA:2.40.37.10 267 412 3.4E-49 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SCD_RS00855 d12546be260c2c461c4c2dcc22438a1c 414 Gene3D G3DSA:3.20.20.10 36 266 2.3E-81 T 22-04-2016 IPR029066 PLP-binding barrel SCD_RS00855 d12546be260c2c461c4c2dcc22438a1c 414 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 285 388 1.7E-18 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 SCD_RS00855 d12546be260c2c461c4c2dcc22438a1c 414 SUPERFAMILY SSF51419 26 282 3.49E-82 T 22-04-2016 IPR029066 PLP-binding barrel SCD_RS00855 d12546be260c2c461c4c2dcc22438a1c 414 PANTHER PTHR11482:SF5 1 414 2.7E-176 T 22-04-2016 SCD_RS00855 d12546be260c2c461c4c2dcc22438a1c 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 1.1E-25 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SCD_RS00855 d12546be260c2c461c4c2dcc22438a1c 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 1.1E-25 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SCD_RS00855 d12546be260c2c461c4c2dcc22438a1c 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 1.1E-25 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SCD_RS00855 d12546be260c2c461c4c2dcc22438a1c 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 368 381 1.1E-25 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SCD_RS00855 d12546be260c2c461c4c2dcc22438a1c 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 1.1E-25 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SCD_RS00855 d12546be260c2c461c4c2dcc22438a1c 414 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 410 4.1E-164 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SCD_RS00855 d12546be260c2c461c4c2dcc22438a1c 414 SUPERFAMILY SSF50621 254 412 6.7E-53 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SCD_RS00855 d12546be260c2c461c4c2dcc22438a1c 414 PANTHER PTHR11482 1 414 2.7E-176 T 22-04-2016 SCD_RS00855 d12546be260c2c461c4c2dcc22438a1c 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 2.8E-29 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SCD_RS00855 d12546be260c2c461c4c2dcc22438a1c 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 2.8E-29 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SCD_RS00855 d12546be260c2c461c4c2dcc22438a1c 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 378 400 2.8E-29 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SCD_RS00855 d12546be260c2c461c4c2dcc22438a1c 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 298 316 2.8E-29 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SCD_RS00855 d12546be260c2c461c4c2dcc22438a1c 414 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 40 280 1.1E-69 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 SCD_RS00465 b7f6dc35764e334c3695a34a90f82ef1 478 SUPERFAMILY SSF55931 4 296 7.19E-119 T 22-04-2016 SCD_RS00465 b7f6dc35764e334c3695a34a90f82ef1 478 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 477 38.314 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 SCD_RS00465 b7f6dc35764e334c3695a34a90f82ef1 478 PANTHER PTHR11659 2 476 1.4E-252 T 22-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 SCD_RS00465 b7f6dc35764e334c3695a34a90f82ef1 478 Gene3D G3DSA:1.10.10.410 421 477 1.1E-4 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal SCD_RS00465 b7f6dc35764e334c3695a34a90f82ef1 478 Pfam PF02637 GatB domain 329 476 9.0E-55 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 SCD_RS00465 b7f6dc35764e334c3695a34a90f82ef1 478 PANTHER PTHR11659:SF0 2 476 1.4E-252 T 22-04-2016 SCD_RS00465 b7f6dc35764e334c3695a34a90f82ef1 478 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 476 2.1E-172 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 SCD_RS00465 b7f6dc35764e334c3695a34a90f82ef1 478 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 144 158 - T 22-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 SCD_RS00465 b7f6dc35764e334c3695a34a90f82ef1 478 SUPERFAMILY SSF89095 297 403 8.76E-34 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 SCD_RS00465 b7f6dc35764e334c3695a34a90f82ef1 478 SMART SM00845 328 476 2.4E-83 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 SCD_RS00465 b7f6dc35764e334c3695a34a90f82ef1 478 Pfam PF02934 GatB/GatE catalytic domain 5 288 7.1E-113 T 22-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 SCD_RS13050 0a2dd6c83d71af724ddabe1ed291cc45 319 SMART SM00962 119 319 4.0E-114 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SCD_RS13050 0a2dd6c83d71af724ddabe1ed291cc45 319 PANTHER PTHR11564:SF16 16 319 7.8E-131 T 22-04-2016 SCD_RS13050 0a2dd6c83d71af724ddabe1ed291cc45 319 Pfam PF00448 SRP54-type protein, GTPase domain 120 318 1.0E-74 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SCD_RS13050 0a2dd6c83d71af724ddabe1ed291cc45 319 SUPERFAMILY SSF52540 112 318 1.35E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13050 0a2dd6c83d71af724ddabe1ed291cc45 319 SMART SM00963 25 105 1.3E-22 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SCD_RS13050 0a2dd6c83d71af724ddabe1ed291cc45 319 Gene3D G3DSA:1.20.120.140 49 129 2.1E-31 T 22-04-2016 SCD_RS13050 0a2dd6c83d71af724ddabe1ed291cc45 319 SMART SM00382 118 308 2.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS13050 0a2dd6c83d71af724ddabe1ed291cc45 319 PANTHER PTHR11564 16 319 7.8E-131 T 22-04-2016 SCD_RS13050 0a2dd6c83d71af724ddabe1ed291cc45 319 Pfam PF02881 SRP54-type protein, helical bundle domain 40 100 4.0E-13 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SCD_RS13050 0a2dd6c83d71af724ddabe1ed291cc45 319 SUPERFAMILY SSF47364 20 99 1.44E-21 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SCD_RS13050 0a2dd6c83d71af724ddabe1ed291cc45 319 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 48 319 60.858 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SCD_RS13050 0a2dd6c83d71af724ddabe1ed291cc45 319 Gene3D G3DSA:3.40.50.300 130 318 2.8E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13050 0a2dd6c83d71af724ddabe1ed291cc45 319 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 292 305 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SCD_RS13050 0a2dd6c83d71af724ddabe1ed291cc45 319 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 48 318 1.8E-107 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SCD_RS14425 953e17f6d7ce84cf9b3c52f1939d16a6 253 PANTHER PTHR10859:SF99 2 132 6.5E-26 T 22-04-2016 SCD_RS14425 953e17f6d7ce84cf9b3c52f1939d16a6 253 PANTHER PTHR10859 2 132 6.5E-26 T 22-04-2016 SCD_RS14425 953e17f6d7ce84cf9b3c52f1939d16a6 253 Gene3D G3DSA:3.90.550.10 7 102 1.6E-16 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS14425 953e17f6d7ce84cf9b3c52f1939d16a6 253 SUPERFAMILY SSF53448 4 149 3.13E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS14425 953e17f6d7ce84cf9b3c52f1939d16a6 253 Pfam PF00535 Glycosyl transferase family 2 8 123 3.1E-18 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SCD_RS08000 53404ae4cf48c68de1aeedb7017f23d3 485 Gene3D G3DSA:1.10.3150.10 15 261 1.5E-41 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS08000 53404ae4cf48c68de1aeedb7017f23d3 485 PANTHER PTHR33525:SF3 15 217 2.0E-18 T 22-04-2016 SCD_RS08000 53404ae4cf48c68de1aeedb7017f23d3 485 Gene3D G3DSA:3.30.450.40 322 478 2.0E-7 T 22-04-2016 IPR029016 GAF domain-like SCD_RS08000 53404ae4cf48c68de1aeedb7017f23d3 485 SUPERFAMILY SSF109604 11 263 1.1E-40 T 22-04-2016 SCD_RS08000 53404ae4cf48c68de1aeedb7017f23d3 485 Pfam PF08668 HDOD domain 16 205 5.2E-27 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS08000 53404ae4cf48c68de1aeedb7017f23d3 485 SUPERFAMILY SSF55781 322 480 8.72E-6 T 22-04-2016 IPR029016 GAF domain-like SCD_RS08000 53404ae4cf48c68de1aeedb7017f23d3 485 PANTHER PTHR33525 15 217 2.0E-18 T 22-04-2016 SCD_RS06880 5a7b84b92eb238f5eeaa6b1c5885b674 526 SUPERFAMILY SSF51905 3 247 7.87E-77 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS06880 5a7b84b92eb238f5eeaa6b1c5885b674 526 SUPERFAMILY SSF51905 348 438 7.87E-77 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS06880 5a7b84b92eb238f5eeaa6b1c5885b674 526 Pfam PF00890 FAD binding domain 5 384 3.9E-111 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SCD_RS06880 5a7b84b92eb238f5eeaa6b1c5885b674 526 Pfam PF02910 Fumarate reductase flavoprotein C-term 431 512 1.4E-12 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SCD_RS06880 5a7b84b92eb238f5eeaa6b1c5885b674 526 Gene3D G3DSA:1.20.58.100 407 511 1.8E-31 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SCD_RS06880 5a7b84b92eb238f5eeaa6b1c5885b674 526 Gene3D G3DSA:3.90.700.10 236 340 3.4E-43 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SCD_RS06880 5a7b84b92eb238f5eeaa6b1c5885b674 526 PANTHER PTHR11632:SF27 4 523 4.0E-264 T 22-04-2016 SCD_RS06880 5a7b84b92eb238f5eeaa6b1c5885b674 526 SUPERFAMILY SSF56425 230 344 8.37E-46 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SCD_RS06880 5a7b84b92eb238f5eeaa6b1c5885b674 526 Gene3D G3DSA:3.50.50.60 3 235 1.6E-104 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS06880 5a7b84b92eb238f5eeaa6b1c5885b674 526 Gene3D G3DSA:3.50.50.60 341 401 1.6E-104 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS06880 5a7b84b92eb238f5eeaa6b1c5885b674 526 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 3 510 7.5E-205 T 22-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 SCD_RS06880 5a7b84b92eb238f5eeaa6b1c5885b674 526 PIRSF PIRSF000171 1 524 4.7E-36 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit SCD_RS06880 5a7b84b92eb238f5eeaa6b1c5885b674 526 SUPERFAMILY SSF46977 415 515 4.84E-30 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SCD_RS06880 5a7b84b92eb238f5eeaa6b1c5885b674 526 PANTHER PTHR11632 4 523 4.0E-264 T 22-04-2016 SCD_RS06880 5a7b84b92eb238f5eeaa6b1c5885b674 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 9.5E-11 T 22-04-2016 SCD_RS06880 5a7b84b92eb238f5eeaa6b1c5885b674 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 369 9.5E-11 T 22-04-2016 SCD_RS12535 f695cfe395ba8797dc01d06dc8797e59 228 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SCD_RS12535 f695cfe395ba8797dc01d06dc8797e59 228 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 4.4E-89 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SCD_RS12535 f695cfe395ba8797dc01d06dc8797e59 228 PANTHER PTHR11749 3 228 1.4E-129 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SCD_RS12535 f695cfe395ba8797dc01d06dc8797e59 228 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 206 1.6E-90 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SCD_RS12535 f695cfe395ba8797dc01d06dc8797e59 228 SUPERFAMILY SSF51366 4 207 2.41E-70 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SCD_RS12535 f695cfe395ba8797dc01d06dc8797e59 228 PIRSF PIRSF001461 1 228 4.3E-98 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SCD_RS12535 f695cfe395ba8797dc01d06dc8797e59 228 Gene3D G3DSA:3.20.20.70 2 225 3.8E-90 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS12535 f695cfe395ba8797dc01d06dc8797e59 228 PANTHER PTHR11749:SF7 3 228 1.4E-129 T 22-04-2016 SCD_RS13990 e865e797d20c54ca2a3425fe5cc9d735 3317 PANTHER PTHR12338:SF6 42 1555 1.9E-24 T 22-04-2016 SCD_RS13990 e865e797d20c54ca2a3425fe5cc9d735 3317 Gene3D G3DSA:2.160.20.10 59 320 4.3E-14 T 22-04-2016 IPR012334 Pectin lyase fold SCD_RS13990 e865e797d20c54ca2a3425fe5cc9d735 3317 PANTHER PTHR12338 42 1555 1.9E-24 T 22-04-2016 SCD_RS13990 e865e797d20c54ca2a3425fe5cc9d735 3317 SUPERFAMILY SSF51126 30 300 4.71E-36 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor SCD_RS13990 e865e797d20c54ca2a3425fe5cc9d735 3317 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 75 150 2.5E-23 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal SCD_RS13990 e865e797d20c54ca2a3425fe5cc9d735 3317 Pfam PF05860 haemagglutination activity domain 60 152 1.3E-20 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal SCD_RS13990 e865e797d20c54ca2a3425fe5cc9d735 3317 SMART SM00912 47 153 1.3E-31 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal SCD_RS13990 e865e797d20c54ca2a3425fe5cc9d735 3317 Pfam PF12545 Filamentous haemagglutinin family outer membrane protein 3151 3263 2.2E-36 T 22-04-2016 IPR021026 Filamentous haemagglutinin family outer membrane protein, domain of unknown function DUF3739 SCD_RS10560 23e242ee897c7095057af9d41352e49e 514 PRINTS PR01806 Virulence factor MviN signature 259 285 1.3E-81 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SCD_RS10560 23e242ee897c7095057af9d41352e49e 514 PRINTS PR01806 Virulence factor MviN signature 52 68 1.3E-81 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SCD_RS10560 23e242ee897c7095057af9d41352e49e 514 PRINTS PR01806 Virulence factor MviN signature 133 157 1.3E-81 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SCD_RS10560 23e242ee897c7095057af9d41352e49e 514 PRINTS PR01806 Virulence factor MviN signature 411 428 1.3E-81 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SCD_RS10560 23e242ee897c7095057af9d41352e49e 514 PRINTS PR01806 Virulence factor MviN signature 33 52 1.3E-81 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SCD_RS10560 23e242ee897c7095057af9d41352e49e 514 PRINTS PR01806 Virulence factor MviN signature 157 178 1.3E-81 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SCD_RS10560 23e242ee897c7095057af9d41352e49e 514 PRINTS PR01806 Virulence factor MviN signature 357 376 1.3E-81 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SCD_RS10560 23e242ee897c7095057af9d41352e49e 514 PANTHER PTHR11206:SF90 70 82 2.4E-86 T 22-04-2016 SCD_RS10560 23e242ee897c7095057af9d41352e49e 514 PANTHER PTHR11206:SF90 215 465 2.4E-86 T 22-04-2016 SCD_RS10560 23e242ee897c7095057af9d41352e49e 514 PANTHER PTHR11206 70 82 2.4E-86 T 22-04-2016 SCD_RS10560 23e242ee897c7095057af9d41352e49e 514 PANTHER PTHR11206 215 465 2.4E-86 T 22-04-2016 SCD_RS10560 23e242ee897c7095057af9d41352e49e 514 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 509 4.5E-149 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SCD_RS10560 23e242ee897c7095057af9d41352e49e 514 PIRSF PIRSF002869 1 514 1.9E-167 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SCD_RS10560 23e242ee897c7095057af9d41352e49e 514 Pfam PF03023 MviN-like protein 28 466 2.5E-140 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 SUPERFAMILY SSF56719 402 647 3.14E-74 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 SMART SM00433 33 650 1.1E-190 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 PRINTS PR01098 Topoisomerase IV subunit B signature 138 152 5.1E-35 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 PRINTS PR01098 Topoisomerase IV subunit B signature 177 194 5.1E-35 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 PRINTS PR01098 Topoisomerase IV subunit B signature 486 498 5.1E-35 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 PRINTS PR01098 Topoisomerase IV subunit B signature 307 323 5.1E-35 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 PRINTS PR01098 Topoisomerase IV subunit B signature 375 400 5.1E-35 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 PRINTS PR01098 Topoisomerase IV subunit B signature 324 339 5.1E-35 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 PRINTS PR01098 Topoisomerase IV subunit B signature 520 536 5.1E-35 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 PRINTS PR01098 Topoisomerase IV subunit B signature 152 167 5.1E-35 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 PRINTS PR01098 Topoisomerase IV subunit B signature 351 374 5.1E-35 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 5.1E-35 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 Gene3D G3DSA:3.40.50.670 411 635 1.2E-75 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 174 8.7E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 Pfam PF00204 DNA gyrase B 247 397 1.4E-39 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 SUPERFAMILY SSF54211 252 398 1.63E-40 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 Gene3D G3DSA:3.30.565.10 15 209 1.1E-67 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 Gene3D G3DSA:3.30.230.10 253 399 4.7E-41 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 SUPERFAMILY SSF55874 5 210 2.1E-58 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 SMART SM00387 27 176 3.6E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 649 3.3E-219 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 PANTHER PTHR10169 1 649 0.0 T 22-04-2016 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 PANTHER PTHR10169:SF45 1 649 0.0 T 22-04-2016 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 583 646 2.7E-22 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 ProSitePatterns PS00177 DNA topoisomerase II signature. 429 437 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 654 43.18 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.1E-60 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.1E-60 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 PRINTS PR00418 DNA topoisomerase II family signature 279 292 1.1E-60 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 PRINTS PR00418 DNA topoisomerase II family signature 112 126 1.1E-60 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 PRINTS PR00418 DNA topoisomerase II family signature 514 531 1.1E-60 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 PRINTS PR00418 DNA topoisomerase II family signature 587 603 1.1E-60 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 PRINTS PR00418 DNA topoisomerase II family signature 534 546 1.1E-60 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 PRINTS PR00418 DNA topoisomerase II family signature 427 441 1.1E-60 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 PRINTS PR00418 DNA topoisomerase II family signature 496 512 1.1E-60 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS13490 7e49fad225cd267d5db4ed949c1b50df 656 Pfam PF01751 Toprim domain 426 539 1.0E-13 T 22-04-2016 IPR006171 Toprim domain SCD_RS11920 62f8fda4073c6ff9eb149a090cb5605b 119 SUPERFAMILY SSF46626 6 119 3.78E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS11920 62f8fda4073c6ff9eb149a090cb5605b 119 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 40 116 7.9E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS11920 62f8fda4073c6ff9eb149a090cb5605b 119 Gene3D G3DSA:1.10.760.10 7 119 7.8E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS11920 62f8fda4073c6ff9eb149a090cb5605b 119 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 41 119 1.4E-28 T 22-04-2016 IPR030999 Sulfur oxidation c-type cytochrome SoxX SCD_RS01820 7f11574592531df62e68b87f710ef40a 195 SUPERFAMILY SSF48695 15 191 1.61E-56 T 22-04-2016 IPR011031 Multihaem cytochrome SCD_RS01820 7f11574592531df62e68b87f710ef40a 195 Gene3D G3DSA:1.10.3820.10 19 191 4.3E-25 T 22-04-2016 SCD_RS01820 7f11574592531df62e68b87f710ef40a 195 PANTHER PTHR30333:SF1 11 191 7.1E-94 T 22-04-2016 SCD_RS01820 7f11574592531df62e68b87f710ef40a 195 PIRSF PIRSF000013 1 195 3.6E-93 T 22-04-2016 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 SCD_RS01820 7f11574592531df62e68b87f710ef40a 195 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 18 191 4.6E-74 T 22-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal SCD_RS01820 7f11574592531df62e68b87f710ef40a 195 PANTHER PTHR30333 11 191 7.1E-94 T 22-04-2016 SCD_RS07890 1b2c13e097550178475a23349a120637 226 Pfam PF03167 Uracil DNA glycosylase superfamily 62 208 2.8E-46 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SCD_RS07890 1b2c13e097550178475a23349a120637 226 PANTHER PTHR33693 37 223 1.3E-72 T 22-04-2016 SCD_RS07890 1b2c13e097550178475a23349a120637 226 PANTHER PTHR33693:SF1 37 223 1.3E-72 T 22-04-2016 SCD_RS07890 1b2c13e097550178475a23349a120637 226 Gene3D G3DSA:3.40.470.10 37 218 5.5E-71 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SCD_RS07890 1b2c13e097550178475a23349a120637 226 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 48 214 2.0E-63 T 22-04-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain SCD_RS07890 1b2c13e097550178475a23349a120637 226 SMART SM00987 62 209 2.3E-41 T 22-04-2016 SCD_RS07890 1b2c13e097550178475a23349a120637 226 SMART SM00986 62 209 2.3E-41 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SCD_RS07890 1b2c13e097550178475a23349a120637 226 SUPERFAMILY SSF52141 37 215 3.6E-62 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 Gene3D G3DSA:1.20.120.160 723 845 2.7E-19 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 405 1.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 449 1.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 1.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 1.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 SUPERFAMILY SSF52172 466 589 1.85E-18 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 Pfam PF12729 Four helix bundle sensory module for signal transduction 12 182 1.2E-10 T 22-04-2016 IPR024478 4HB MCP domain SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 Gene3D G3DSA:1.10.287.130 217 285 5.1E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 450 1.4E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 SUPERFAMILY SSF47384 211 290 4.9E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 Gene3D G3DSA:3.40.50.2300 465 590 3.8E-16 T 22-04-2016 SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 Gene3D G3DSA:3.40.50.2300 613 722 3.4E-43 T 22-04-2016 SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 PANTHER PTHR24423 222 455 4.1E-146 T 22-04-2016 SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 PANTHER PTHR24423 600 773 4.1E-146 T 22-04-2016 SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 PANTHER PTHR24423 31 42 4.1E-146 T 22-04-2016 SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 SUPERFAMILY SSF52172 613 734 1.24E-37 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 Pfam PF00072 Response regulator receiver domain 471 586 2.4E-6 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 Pfam PF00072 Response regulator receiver domain 615 729 1.4E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 Pfam PF01627 Hpt domain 768 843 8.4E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 SMART SM00387 336 452 6.5E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 289 4.0E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 SUPERFAMILY SSF55874 278 448 3.01E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 SMART SM00388 224 289 1.5E-27 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 SMART SM00448 613 729 1.1E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 SMART SM00448 469 587 0.0072 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 Gene3D G3DSA:3.30.565.10 290 452 9.2E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS08740 4f6e0e8e842971f707b5a2b71bda8f8d 862 SUPERFAMILY SSF47226 712 847 4.84E-21 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS12015 3dd161e9c42e05da228f9d6f1390eb68 407 Gene3D G3DSA:3.90.550.10 320 361 1.3E-68 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS12015 3dd161e9c42e05da228f9d6f1390eb68 407 Gene3D G3DSA:3.90.550.10 2 283 1.3E-68 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS12015 3dd161e9c42e05da228f9d6f1390eb68 407 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 9 28 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SCD_RS12015 3dd161e9c42e05da228f9d6f1390eb68 407 SUPERFAMILY SSF51161 302 401 9.6E-14 T 22-04-2016 IPR011004 Trimeric LpxA-like SCD_RS12015 3dd161e9c42e05da228f9d6f1390eb68 407 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SCD_RS12015 3dd161e9c42e05da228f9d6f1390eb68 407 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 399 41.806 T 22-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SCD_RS12015 3dd161e9c42e05da228f9d6f1390eb68 407 PANTHER PTHR22572 4 404 3.6E-140 T 22-04-2016 SCD_RS12015 3dd161e9c42e05da228f9d6f1390eb68 407 PANTHER PTHR22572:SF10 4 404 3.6E-140 T 22-04-2016 SCD_RS12015 3dd161e9c42e05da228f9d6f1390eb68 407 SUPERFAMILY SSF53448 320 336 8.45E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS12015 3dd161e9c42e05da228f9d6f1390eb68 407 SUPERFAMILY SSF53448 2 276 8.45E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS12015 3dd161e9c42e05da228f9d6f1390eb68 407 Pfam PF00483 Nucleotidyl transferase 5 272 9.6E-59 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SCD_RS12665 cb0690acc12a4c874754bc9b73c63a4c 341 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 15 333 1.4E-126 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 SCD_RS12665 cb0690acc12a4c874754bc9b73c63a4c 341 SUPERFAMILY SSF53659 13 335 9.94E-112 T 22-04-2016 SCD_RS12665 cb0690acc12a4c874754bc9b73c63a4c 341 PANTHER PTHR30004:SF5 9 336 1.6E-175 T 22-04-2016 SCD_RS12665 cb0690acc12a4c874754bc9b73c63a4c 341 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 11 333 35.42 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 SCD_RS12665 cb0690acc12a4c874754bc9b73c63a4c 341 Gene3D G3DSA:3.40.718.10 11 337 2.3E-133 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SCD_RS12665 cb0690acc12a4c874754bc9b73c63a4c 341 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 42 329 1.7E-107 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 SCD_RS12665 cb0690acc12a4c874754bc9b73c63a4c 341 PANTHER PTHR30004 9 336 1.6E-175 T 22-04-2016 SCD_RS04945 41be90a0202549b5a58995e5e2934045 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 108 189 5.8E-12 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal SCD_RS04945 41be90a0202549b5a58995e5e2934045 222 Gene3D G3DSA:3.40.30.10 2 90 1.2E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS04945 41be90a0202549b5a58995e5e2934045 222 SUPERFAMILY SSF52833 3 98 2.13E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS04945 41be90a0202549b5a58995e5e2934045 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 75 1.2E-18 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SCD_RS04945 41be90a0202549b5a58995e5e2934045 222 SUPERFAMILY SSF47616 78 209 8.03E-32 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SCD_RS04945 41be90a0202549b5a58995e5e2934045 222 Gene3D G3DSA:1.20.1050.10 91 210 4.1E-26 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SCD_RS04945 41be90a0202549b5a58995e5e2934045 222 PANTHER PTHR11260 4 200 3.2E-55 T 22-04-2016 SCD_RS04945 41be90a0202549b5a58995e5e2934045 222 PANTHER PTHR11260:SF238 4 200 3.2E-55 T 22-04-2016 SCD_RS08820 52ee51a1ccee9f538de651891931eb1e 274 PANTHER PTHR13832:SF278 1 262 5.8E-51 T 22-04-2016 SCD_RS08820 52ee51a1ccee9f538de651891931eb1e 274 Pfam PF13672 Protein phosphatase 2C 19 214 4.0E-13 T 22-04-2016 SCD_RS08820 52ee51a1ccee9f538de651891931eb1e 274 SMART SM00332 4 253 2.6E-25 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SCD_RS08820 52ee51a1ccee9f538de651891931eb1e 274 SMART SM00331 13 255 8.3E-36 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SCD_RS08820 52ee51a1ccee9f538de651891931eb1e 274 Gene3D G3DSA:3.60.40.10 5 255 1.3E-63 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SCD_RS08820 52ee51a1ccee9f538de651891931eb1e 274 SUPERFAMILY SSF81606 6 255 3.14E-59 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SCD_RS08820 52ee51a1ccee9f538de651891931eb1e 274 PANTHER PTHR13832 1 262 5.8E-51 T 22-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 SCD_RS00060 8ef0775e54473d78e781bd40a3e94e43 423 SUPERFAMILY SSF48013 5 147 1.57E-26 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SCD_RS00060 8ef0775e54473d78e781bd40a3e94e43 423 Pfam PF01029 NusB family 19 124 3.1E-17 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SCD_RS00060 8ef0775e54473d78e781bd40a3e94e43 423 Gene3D G3DSA:3.30.70.1170 171 226 1.8E-17 T 22-04-2016 SCD_RS00060 8ef0775e54473d78e781bd40a3e94e43 423 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 7 422 3.5E-109 T 22-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SCD_RS00060 8ef0775e54473d78e781bd40a3e94e43 423 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 311 322 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SCD_RS00060 8ef0775e54473d78e781bd40a3e94e43 423 Pfam PF01189 16S rRNA methyltransferase RsmB/F 237 420 2.8E-53 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SCD_RS00060 8ef0775e54473d78e781bd40a3e94e43 423 SUPERFAMILY SSF53335 140 422 4.91E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS00060 8ef0775e54473d78e781bd40a3e94e43 423 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 247 257 2.1E-23 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SCD_RS00060 8ef0775e54473d78e781bd40a3e94e43 423 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 218 232 2.1E-23 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SCD_RS00060 8ef0775e54473d78e781bd40a3e94e43 423 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 312 324 2.1E-23 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SCD_RS00060 8ef0775e54473d78e781bd40a3e94e43 423 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 362 378 2.1E-23 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SCD_RS00060 8ef0775e54473d78e781bd40a3e94e43 423 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 405 422 2.1E-23 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SCD_RS00060 8ef0775e54473d78e781bd40a3e94e43 423 PANTHER PTHR22807 40 422 5.9E-85 T 22-04-2016 SCD_RS00060 8ef0775e54473d78e781bd40a3e94e43 423 Gene3D G3DSA:1.10.940.10 3 146 1.4E-36 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SCD_RS00060 8ef0775e54473d78e781bd40a3e94e43 423 Gene3D G3DSA:3.40.50.150 228 422 4.8E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS00060 8ef0775e54473d78e781bd40a3e94e43 423 Gene3D G3DSA:1.10.287.730 147 170 1.4E-4 T 22-04-2016 SCD_RS00060 8ef0775e54473d78e781bd40a3e94e43 423 PANTHER PTHR22807:SF30 40 422 5.9E-85 T 22-04-2016 SCD_RS02315 30dfa9db8fded97014928b1449143cdc 285 Pfam PF13847 Methyltransferase domain 116 248 2.0E-18 T 22-04-2016 IPR025714 Methyltransferase domain SCD_RS02315 30dfa9db8fded97014928b1449143cdc 285 SUPERFAMILY SSF53335 12 266 7.32E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS02315 30dfa9db8fded97014928b1449143cdc 285 Gene3D G3DSA:3.40.50.150 93 281 6.6E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS02315 30dfa9db8fded97014928b1449143cdc 285 Gene3D G3DSA:1.10.8.10 4 91 2.2E-26 T 22-04-2016 SCD_RS02315 30dfa9db8fded97014928b1449143cdc 285 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 10 283 44.021 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 SCD_RS02315 30dfa9db8fded97014928b1449143cdc 285 PANTHER PTHR18895 23 284 2.1E-103 T 22-04-2016 SCD_RS02315 30dfa9db8fded97014928b1449143cdc 285 PANTHER PTHR18895:SF64 23 284 2.1E-103 T 22-04-2016 SCD_RS02315 30dfa9db8fded97014928b1449143cdc 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 188 194 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SCD_RS02315 30dfa9db8fded97014928b1449143cdc 285 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 30 279 6.3E-96 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 SCD_RS02315 30dfa9db8fded97014928b1449143cdc 285 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 25 284 5.6E-81 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 SCD_RS13285 35aafb09f486aacd11c529670d7eb557 568 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 43 149 9.1E-21 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 SCD_RS13285 35aafb09f486aacd11c529670d7eb557 568 Gene3D G3DSA:3.40.50.300 293 566 3.9E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13285 35aafb09f486aacd11c529670d7eb557 568 SUPERFAMILY SSF160246 4 145 4.32E-38 T 22-04-2016 SCD_RS13285 35aafb09f486aacd11c529670d7eb557 568 Pfam PF00437 Type II/IV secretion system protein 195 453 1.2E-78 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SCD_RS13285 35aafb09f486aacd11c529670d7eb557 568 PANTHER PTHR30258:SF11 1 568 1.6E-215 T 22-04-2016 SCD_RS13285 35aafb09f486aacd11c529670d7eb557 568 PANTHER PTHR30258 1 568 1.6E-215 T 22-04-2016 SCD_RS13285 35aafb09f486aacd11c529670d7eb557 568 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 382 396 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SCD_RS13285 35aafb09f486aacd11c529670d7eb557 568 SUPERFAMILY SSF52540 178 561 1.33E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13285 35aafb09f486aacd11c529670d7eb557 568 Gene3D G3DSA:3.30.450.90 176 287 1.5E-47 T 22-04-2016 SCD_RS08185 e0bf34a2d1256240186da36e8ded1fc3 257 PANTHER PTHR22572 2 256 6.7E-173 T 22-04-2016 SCD_RS08185 e0bf34a2d1256240186da36e8ded1fc3 257 Pfam PF00483 Nucleotidyl transferase 2 204 7.2E-18 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SCD_RS08185 e0bf34a2d1256240186da36e8ded1fc3 257 PANTHER PTHR22572:SF16 2 256 6.7E-173 T 22-04-2016 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940|UniPathway: UPA00055|UniPathway: UPA00281 SCD_RS08185 e0bf34a2d1256240186da36e8ded1fc3 257 SUPERFAMILY SSF53448 1 256 4.38E-70 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS08185 e0bf34a2d1256240186da36e8ded1fc3 257 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 256 7.4E-145 T 22-04-2016 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940|UniPathway: UPA00055|UniPathway: UPA00281 SCD_RS08185 e0bf34a2d1256240186da36e8ded1fc3 257 Gene3D G3DSA:3.90.550.10 1 256 6.5E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS03800 bd6d296655fe9f07dd966a35d19055ee 163 PRINTS PR00446 Hydrogen uptake protein signature 35 52 2.8E-23 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SCD_RS03800 bd6d296655fe9f07dd966a35d19055ee 163 PRINTS PR00446 Hydrogen uptake protein signature 3 15 2.8E-23 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SCD_RS03800 bd6d296655fe9f07dd966a35d19055ee 163 PRINTS PR00446 Hydrogen uptake protein signature 67 83 2.8E-23 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SCD_RS03800 bd6d296655fe9f07dd966a35d19055ee 163 PRINTS PR00446 Hydrogen uptake protein signature 56 66 2.8E-23 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SCD_RS03800 bd6d296655fe9f07dd966a35d19055ee 163 PRINTS PR00446 Hydrogen uptake protein signature 15 26 2.8E-23 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SCD_RS03800 bd6d296655fe9f07dd966a35d19055ee 163 PANTHER PTHR30302:SF1 1 163 5.7E-59 T 22-04-2016 SCD_RS03800 bd6d296655fe9f07dd966a35d19055ee 163 Gene3D G3DSA:3.40.50.1450 1 160 1.6E-51 T 22-04-2016 IPR023430 Peptidase HybD-like domain SCD_RS03800 bd6d296655fe9f07dd966a35d19055ee 163 PANTHER PTHR30302 1 163 5.7E-59 T 22-04-2016 SCD_RS03800 bd6d296655fe9f07dd966a35d19055ee 163 Pfam PF01750 Hydrogenase maturation protease 20 146 8.1E-32 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SCD_RS03800 bd6d296655fe9f07dd966a35d19055ee 163 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 5 148 2.8E-46 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SCD_RS03800 bd6d296655fe9f07dd966a35d19055ee 163 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 3 152 2.1E-48 T 22-04-2016 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 SCD_RS03800 bd6d296655fe9f07dd966a35d19055ee 163 SUPERFAMILY SSF53163 1 159 4.45E-45 T 22-04-2016 IPR023430 Peptidase HybD-like domain SCD_RS14710 6eb23a9f5bd05ac3c550144c33e748f2 223 PANTHER PTHR10108:SF779 27 182 9.0E-15 T 22-04-2016 SCD_RS14710 6eb23a9f5bd05ac3c550144c33e748f2 223 Gene3D G3DSA:3.40.50.150 6 180 2.8E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS14710 6eb23a9f5bd05ac3c550144c33e748f2 223 Pfam PF13489 Methyltransferase domain 20 172 1.2E-16 T 22-04-2016 SCD_RS14710 6eb23a9f5bd05ac3c550144c33e748f2 223 PANTHER PTHR10108 27 182 9.0E-15 T 22-04-2016 SCD_RS14710 6eb23a9f5bd05ac3c550144c33e748f2 223 SUPERFAMILY SSF53335 6 198 6.4E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS14375 6fd0346748b95939b5f134bc0b13ede9 227 Pfam PF02348 Cytidylyltransferase 3 176 5.8E-32 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SCD_RS14375 6fd0346748b95939b5f134bc0b13ede9 227 PANTHER PTHR21485 3 215 7.2E-39 T 22-04-2016 SCD_RS14375 6fd0346748b95939b5f134bc0b13ede9 227 Gene3D G3DSA:3.90.550.10 3 226 4.7E-71 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS14375 6fd0346748b95939b5f134bc0b13ede9 227 TIGRFAM TIGR03584 PseF: pseudaminic acid cytidylyltransferase 3 223 2.5E-88 T 22-04-2016 IPR020039 Pseudaminic acid cytidylyltransferase KEGG: 00520+2.7.7.81|MetaCyc: PWY-6143 SCD_RS14375 6fd0346748b95939b5f134bc0b13ede9 227 SUPERFAMILY SSF53448 3 225 9.86E-55 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS00585 b373a45d3c42a23b2e7dfddef7014007 266 Gene3D G3DSA:3.40.50.150 28 192 6.1E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS00585 b373a45d3c42a23b2e7dfddef7014007 266 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 40 93 8.6E-5 T 22-04-2016 SCD_RS00585 b373a45d3c42a23b2e7dfddef7014007 266 SUPERFAMILY SSF53335 172 192 1.61E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS00585 b373a45d3c42a23b2e7dfddef7014007 266 SUPERFAMILY SSF53335 31 144 1.61E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS05840 193b8f06a4c2e55a6f85001e9afbff80 462 SUPERFAMILY SSF48163 298 456 2.35E-41 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SCD_RS05840 193b8f06a4c2e55a6f85001e9afbff80 462 Gene3D G3DSA:3.40.50.620 2 66 8.3E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS05840 193b8f06a4c2e55a6f85001e9afbff80 462 Gene3D G3DSA:3.40.50.620 180 229 8.3E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS05840 193b8f06a4c2e55a6f85001e9afbff80 462 Gene3D G3DSA:1.10.10.350 362 456 2.1E-24 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SCD_RS05840 193b8f06a4c2e55a6f85001e9afbff80 462 SUPERFAMILY SSF52374 1 297 7.78E-111 T 22-04-2016 SCD_RS05840 193b8f06a4c2e55a6f85001e9afbff80 462 Gene3D G3DSA:1.10.1160.10 232 313 1.6E-35 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 SCD_RS05840 193b8f06a4c2e55a6f85001e9afbff80 462 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 1 304 1.2E-104 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 SCD_RS05840 193b8f06a4c2e55a6f85001e9afbff80 462 PANTHER PTHR11451:SF41 2 320 1.9E-98 T 22-04-2016 SCD_RS05840 193b8f06a4c2e55a6f85001e9afbff80 462 Gene3D G3DSA:3.90.800.10 67 179 5.0E-35 T 22-04-2016 SCD_RS05840 193b8f06a4c2e55a6f85001e9afbff80 462 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 2 458 34.116 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SCD_RS05840 193b8f06a4c2e55a6f85001e9afbff80 462 PANTHER PTHR11451 2 320 1.9E-98 T 22-04-2016 SCD_RS05840 193b8f06a4c2e55a6f85001e9afbff80 462 PRINTS PR00987 Glutamyl-tRNA synthetase signature 34 47 2.6E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SCD_RS05840 193b8f06a4c2e55a6f85001e9afbff80 462 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 202 2.6E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SCD_RS05840 193b8f06a4c2e55a6f85001e9afbff80 462 PRINTS PR00987 Glutamyl-tRNA synthetase signature 5 17 2.6E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SCD_RS05840 193b8f06a4c2e55a6f85001e9afbff80 462 PRINTS PR00987 Glutamyl-tRNA synthetase signature 178 188 2.6E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SCD_RS05840 193b8f06a4c2e55a6f85001e9afbff80 462 PRINTS PR00987 Glutamyl-tRNA synthetase signature 19 30 2.6E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SCD_RS05840 193b8f06a4c2e55a6f85001e9afbff80 462 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 8 19 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS05840 193b8f06a4c2e55a6f85001e9afbff80 462 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 456 4.6E-173 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SCD_RS00765 ddd2db893976e12ee1802312a3c7299e 396 Pfam PF01170 Putative RNA methylase family UPF0020 165 369 5.6E-52 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SCD_RS00765 ddd2db893976e12ee1802312a3c7299e 396 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 198 209 - T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SCD_RS00765 ddd2db893976e12ee1802312a3c7299e 396 PANTHER PTHR14911:SF13 6 215 1.6E-63 T 22-04-2016 SCD_RS00765 ddd2db893976e12ee1802312a3c7299e 396 PANTHER PTHR14911:SF13 254 369 1.6E-63 T 22-04-2016 SCD_RS00765 ddd2db893976e12ee1802312a3c7299e 396 SUPERFAMILY SSF53335 257 373 1.0E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS00765 ddd2db893976e12ee1802312a3c7299e 396 SUPERFAMILY SSF53335 149 220 1.0E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS00765 ddd2db893976e12ee1802312a3c7299e 396 SMART SM00981 59 157 9.2E-21 T 22-04-2016 IPR004114 THUMP domain GO:0003723 SCD_RS00765 ddd2db893976e12ee1802312a3c7299e 396 PANTHER PTHR14911 6 215 1.6E-63 T 22-04-2016 SCD_RS00765 ddd2db893976e12ee1802312a3c7299e 396 PANTHER PTHR14911 254 369 1.6E-63 T 22-04-2016 SCD_RS00765 ddd2db893976e12ee1802312a3c7299e 396 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 196 210 1.9E-5 T 22-04-2016 SCD_RS00765 ddd2db893976e12ee1802312a3c7299e 396 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 299 311 1.9E-5 T 22-04-2016 SCD_RS00765 ddd2db893976e12ee1802312a3c7299e 396 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 302 308 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SCD_RS00765 ddd2db893976e12ee1802312a3c7299e 396 Gene3D G3DSA:3.40.50.150 254 373 6.7E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS00765 ddd2db893976e12ee1802312a3c7299e 396 Gene3D G3DSA:3.40.50.150 150 217 6.7E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS00765 ddd2db893976e12ee1802312a3c7299e 396 Pfam PF02926 THUMP domain 31 156 1.8E-13 T 22-04-2016 IPR004114 THUMP domain GO:0003723 SCD_RS13795 f216772140236187017c0ee18eaffe2b 180 PANTHER PTHR10681:SF125 50 171 9.5E-26 T 22-04-2016 SCD_RS13795 f216772140236187017c0ee18eaffe2b 180 SUPERFAMILY SSF52833 6 174 8.41E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS13795 f216772140236187017c0ee18eaffe2b 180 Gene3D G3DSA:3.40.30.10 3 179 1.5E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS13795 f216772140236187017c0ee18eaffe2b 180 PANTHER PTHR10681 50 171 9.5E-26 T 22-04-2016 SCD_RS13795 f216772140236187017c0ee18eaffe2b 180 ProSitePatterns PS00194 Thioredoxin family active site. 70 88 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SCD_RS13795 f216772140236187017c0ee18eaffe2b 180 Pfam PF08534 Redoxin 49 166 1.2E-23 T 22-04-2016 IPR013740 Redoxin GO:0016491 SCD_RS08770 abc6ee165ad85ab705994e89298eec6c 803 SUPERFAMILY SSF52540 316 588 9.81E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08770 abc6ee165ad85ab705994e89298eec6c 803 Hamap MF_01973 Lon protease [lon]. 14 774 71.58 T 22-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 SCD_RS08770 abc6ee165ad85ab705994e89298eec6c 803 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 678 686 - T 22-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 SCD_RS08770 abc6ee165ad85ab705994e89298eec6c 803 SMART SM00382 350 494 1.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS08770 abc6ee165ad85ab705994e89298eec6c 803 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 13 204 3.2E-46 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 SCD_RS08770 abc6ee165ad85ab705994e89298eec6c 803 Gene3D G3DSA:1.10.8.60 502 586 2.7E-32 T 22-04-2016 SCD_RS08770 abc6ee165ad85ab705994e89298eec6c 803 SUPERFAMILY SSF54211 597 772 6.83E-60 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SCD_RS08770 abc6ee165ad85ab705994e89298eec6c 803 PANTHER PTHR10046:SF43 9 778 0.0 T 22-04-2016 SCD_RS08770 abc6ee165ad85ab705994e89298eec6c 803 TIGRFAM TIGR00763 lon: endopeptidase La 15 772 2.9E-298 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 SCD_RS08770 abc6ee165ad85ab705994e89298eec6c 803 Gene3D G3DSA:3.40.50.300 313 501 1.2E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08770 abc6ee165ad85ab705994e89298eec6c 803 SMART SM00464 13 205 6.4E-79 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 SCD_RS08770 abc6ee165ad85ab705994e89298eec6c 803 Gene3D G3DSA:3.30.230.10 591 773 6.0E-76 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SCD_RS08770 abc6ee165ad85ab705994e89298eec6c 803 PANTHER PTHR10046 9 778 0.0 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 SCD_RS08770 abc6ee165ad85ab705994e89298eec6c 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 597 613 1.2E-55 T 22-04-2016 SCD_RS08770 abc6ee165ad85ab705994e89298eec6c 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 728 746 1.2E-55 T 22-04-2016 SCD_RS08770 abc6ee165ad85ab705994e89298eec6c 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 675 694 1.2E-55 T 22-04-2016 SCD_RS08770 abc6ee165ad85ab705994e89298eec6c 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 358 377 1.2E-55 T 22-04-2016 SCD_RS08770 abc6ee165ad85ab705994e89298eec6c 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 705 724 1.2E-55 T 22-04-2016 SCD_RS08770 abc6ee165ad85ab705994e89298eec6c 803 SUPERFAMILY SSF88697 13 204 2.73E-52 T 22-04-2016 IPR015947 PUA-like domain SCD_RS08770 abc6ee165ad85ab705994e89298eec6c 803 PIRSF PIRSF001174 2 777 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 SCD_RS08770 abc6ee165ad85ab705994e89298eec6c 803 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 572 774 6.6E-97 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 SCD_RS08770 abc6ee165ad85ab705994e89298eec6c 803 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 354 491 3.7E-16 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SCD_RS11370 46ac944de704d3cd4c631260a3182e05 747 Pfam PF00072 Response regulator receiver domain 30 138 3.7E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS11370 46ac944de704d3cd4c631260a3182e05 747 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 564 578 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SCD_RS11370 46ac944de704d3cd4c631260a3182e05 747 PANTHER PTHR30258 168 744 1.0E-194 T 22-04-2016 SCD_RS11370 46ac944de704d3cd4c631260a3182e05 747 Gene3D G3DSA:3.40.50.2300 28 154 3.5E-32 T 22-04-2016 SCD_RS11370 46ac944de704d3cd4c631260a3182e05 747 SUPERFAMILY SSF160246 175 316 4.71E-27 T 22-04-2016 SCD_RS11370 46ac944de704d3cd4c631260a3182e05 747 SMART SM00448 28 140 2.3E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS11370 46ac944de704d3cd4c631260a3182e05 747 SUPERFAMILY SSF52172 28 161 3.13E-33 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS11370 46ac944de704d3cd4c631260a3182e05 747 SUPERFAMILY SSF52540 359 742 2.76E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11370 46ac944de704d3cd4c631260a3182e05 747 PANTHER PTHR30258:SF1 168 744 1.0E-194 T 22-04-2016 SCD_RS11370 46ac944de704d3cd4c631260a3182e05 747 Gene3D G3DSA:3.30.450.90 343 469 1.6E-47 T 22-04-2016 SCD_RS11370 46ac944de704d3cd4c631260a3182e05 747 Gene3D G3DSA:3.40.50.300 473 744 9.4E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11370 46ac944de704d3cd4c631260a3182e05 747 Pfam PF00437 Type II/IV secretion system protein 371 636 4.0E-70 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SCD_RS11370 46ac944de704d3cd4c631260a3182e05 747 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 214 319 2.4E-16 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 SCD_RS08680 d5f825028da68c757b35524a3d7412aa 308 PANTHER PTHR11138 3 299 1.2E-55 T 22-04-2016 SCD_RS08680 d5f825028da68c757b35524a3d7412aa 308 SUPERFAMILY SSF53328 4 202 1.44E-53 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS08680 d5f825028da68c757b35524a3d7412aa 308 Gene3D G3DSA:3.40.50.170 4 198 3.7E-49 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS08680 d5f825028da68c757b35524a3d7412aa 308 Pfam PF02911 Formyl transferase, C-terminal domain 204 299 3.0E-19 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS08680 d5f825028da68c757b35524a3d7412aa 308 Gene3D G3DSA:3.10.25.10 205 300 8.8E-18 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS08680 d5f825028da68c757b35524a3d7412aa 308 SUPERFAMILY SSF50486 203 300 1.88E-18 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 SCD_RS08680 d5f825028da68c757b35524a3d7412aa 308 Pfam PF00551 Formyl transferase 25 173 1.1E-26 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS08675 e9381357c7a46a724c4c83ce2c136cd7 312 PANTHER PTHR10859:SF49 5 312 4.2E-107 T 22-04-2016 SCD_RS08675 e9381357c7a46a724c4c83ce2c136cd7 312 PANTHER PTHR10859 5 312 4.2E-107 T 22-04-2016 SCD_RS08675 e9381357c7a46a724c4c83ce2c136cd7 312 SUPERFAMILY SSF53448 4 255 1.89E-36 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS08675 e9381357c7a46a724c4c83ce2c136cd7 312 Gene3D G3DSA:3.90.550.10 4 136 2.7E-21 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS08675 e9381357c7a46a724c4c83ce2c136cd7 312 Pfam PF00535 Glycosyl transferase family 2 7 168 3.7E-28 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SCD_RS13350 b69f4f42d24e6c887fda258aafc5f360 392 PANTHER PTHR21666:SF213 8 390 8.2E-68 T 22-04-2016 SCD_RS13350 b69f4f42d24e6c887fda258aafc5f360 392 PANTHER PTHR21666 8 390 8.2E-68 T 22-04-2016 SCD_RS13350 b69f4f42d24e6c887fda258aafc5f360 392 SUPERFAMILY SSF51261 185 388 2.46E-39 T 22-04-2016 IPR011055 Duplicated hybrid motif SCD_RS13350 b69f4f42d24e6c887fda258aafc5f360 392 Pfam PF01551 Peptidase family M23 292 385 5.2E-21 T 22-04-2016 IPR016047 Peptidase M23 SCD_RS13350 b69f4f42d24e6c887fda258aafc5f360 392 Gene3D G3DSA:2.70.70.10 260 390 5.7E-31 T 22-04-2016 SCD_RS05870 9eea65002dd29552cab9c2bda84872c0 437 SMART SM00382 47 164 1.5E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS05870 9eea65002dd29552cab9c2bda84872c0 437 Pfam PF16193 AAA C-terminal domain 185 259 3.8E-21 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain SCD_RS05870 9eea65002dd29552cab9c2bda84872c0 437 Pfam PF12002 MgsA AAA+ ATPase C terminal 260 426 9.1E-67 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal SCD_RS05870 9eea65002dd29552cab9c2bda84872c0 437 PANTHER PTHR13779 10 437 1.4E-196 T 22-04-2016 SCD_RS05870 9eea65002dd29552cab9c2bda84872c0 437 SUPERFAMILY SSF48019 244 426 4.87E-74 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SCD_RS05870 9eea65002dd29552cab9c2bda84872c0 437 Gene3D G3DSA:1.20.272.10 241 339 2.2E-43 T 22-04-2016 SCD_RS05870 9eea65002dd29552cab9c2bda84872c0 437 Gene3D G3DSA:3.40.50.300 11 152 2.9E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05870 9eea65002dd29552cab9c2bda84872c0 437 SUPERFAMILY SSF52540 12 228 3.3E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05870 9eea65002dd29552cab9c2bda84872c0 437 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 51 159 3.1E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SCD_RS05870 9eea65002dd29552cab9c2bda84872c0 437 Gene3D G3DSA:1.10.8.60 153 224 5.1E-9 T 22-04-2016 SCD_RS05870 9eea65002dd29552cab9c2bda84872c0 437 Gene3D G3DSA:1.10.3710.10 340 435 1.9E-34 T 22-04-2016 SCD_RS05870 9eea65002dd29552cab9c2bda84872c0 437 PANTHER PTHR13779:SF7 10 437 1.4E-196 T 22-04-2016 SCD_RS15725 139070ca7f421600046d9f5f73e9b968 510 Pfam PF00072 Response regulator receiver domain 4 114 2.9E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS15725 139070ca7f421600046d9f5f73e9b968 510 SUPERFAMILY SSF55785 138 250 1.42E-17 T 22-04-2016 IPR000014 PAS domain SCD_RS15725 139070ca7f421600046d9f5f73e9b968 510 SUPERFAMILY SSF55874 341 501 2.23E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15725 139070ca7f421600046d9f5f73e9b968 510 Pfam PF00512 His Kinase A (phospho-acceptor) domain 285 348 2.0E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS15725 139070ca7f421600046d9f5f73e9b968 510 SUPERFAMILY SSF52172 1 133 1.57E-33 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS15725 139070ca7f421600046d9f5f73e9b968 510 SMART SM00387 393 505 1.4E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15725 139070ca7f421600046d9f5f73e9b968 510 Gene3D G3DSA:3.30.565.10 351 505 9.2E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15725 139070ca7f421600046d9f5f73e9b968 510 SMART SM00388 283 351 4.4E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS15725 139070ca7f421600046d9f5f73e9b968 510 SUPERFAMILY SSF47384 269 348 1.2E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS15725 139070ca7f421600046d9f5f73e9b968 510 Gene3D G3DSA:3.30.450.20 139 252 5.7E-27 T 22-04-2016 SCD_RS15725 139070ca7f421600046d9f5f73e9b968 510 SMART SM00091 147 213 2.0E-9 T 22-04-2016 IPR000014 PAS domain SCD_RS15725 139070ca7f421600046d9f5f73e9b968 510 Gene3D G3DSA:3.40.50.2300 1 127 1.6E-32 T 22-04-2016 SCD_RS15725 139070ca7f421600046d9f5f73e9b968 510 Gene3D G3DSA:1.10.287.130 276 346 2.1E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS15725 139070ca7f421600046d9f5f73e9b968 510 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 146 258 4.1E-11 T 22-04-2016 IPR000014 PAS domain SCD_RS15725 139070ca7f421600046d9f5f73e9b968 510 PANTHER PTHR24423 124 501 2.5E-83 T 22-04-2016 SCD_RS15725 139070ca7f421600046d9f5f73e9b968 510 PANTHER PTHR24423 1 6 2.5E-83 T 22-04-2016 SCD_RS15725 139070ca7f421600046d9f5f73e9b968 510 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 501 1.9E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15725 139070ca7f421600046d9f5f73e9b968 510 SMART SM00448 2 114 4.0E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS15725 139070ca7f421600046d9f5f73e9b968 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 502 9.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS15725 139070ca7f421600046d9f5f73e9b968 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 483 9.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS15725 139070ca7f421600046d9f5f73e9b968 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 446 9.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS15725 139070ca7f421600046d9f5f73e9b968 510 Pfam PF08448 PAS fold 153 253 1.5E-16 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS08785 cf014e2fa46d53489c812e0241bf2a13 435 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 2.9E-36 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SCD_RS08785 cf014e2fa46d53489c812e0241bf2a13 435 Gene3D G3DSA:3.30.70.1050 1 118 1.3E-32 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SCD_RS08785 cf014e2fa46d53489c812e0241bf2a13 435 TIGRFAM TIGR00115 tig: trigger factor 11 416 5.2E-129 T 22-04-2016 IPR005215 Trigger factor GO:0015031 SCD_RS08785 cf014e2fa46d53489c812e0241bf2a13 435 PIRSF PIRSF003095 1 435 5.2E-118 T 22-04-2016 IPR005215 Trigger factor GO:0015031 SCD_RS08785 cf014e2fa46d53489c812e0241bf2a13 435 PANTHER PTHR30560:SF3 1 434 2.6E-99 T 22-04-2016 SCD_RS08785 cf014e2fa46d53489c812e0241bf2a13 435 Gene3D G3DSA:1.10.3120.10 205 393 4.4E-54 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SCD_RS08785 cf014e2fa46d53489c812e0241bf2a13 435 PANTHER PTHR30560 1 434 2.6E-99 T 22-04-2016 SCD_RS08785 cf014e2fa46d53489c812e0241bf2a13 435 SUPERFAMILY SSF109998 249 433 3.27E-44 T 22-04-2016 IPR027304 Trigger factor/SurA domain SCD_RS08785 cf014e2fa46d53489c812e0241bf2a13 435 SUPERFAMILY SSF54534 102 242 5.5E-30 T 22-04-2016 SCD_RS08785 cf014e2fa46d53489c812e0241bf2a13 435 Hamap MF_00303 Trigger factor [tig]. 1 422 20.09 T 22-04-2016 IPR005215 Trigger factor GO:0015031 SCD_RS08785 cf014e2fa46d53489c812e0241bf2a13 435 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 417 2.9E-32 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SCD_RS08785 cf014e2fa46d53489c812e0241bf2a13 435 SUPERFAMILY SSF102735 1 130 6.8E-33 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SCD_RS08785 cf014e2fa46d53489c812e0241bf2a13 435 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 238 1.2E-13 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SCD_RS00885 517ad028773b3f1fdaa1efa7d0e6b6e7 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS00885 517ad028773b3f1fdaa1efa7d0e6b6e7 308 Pfam PF00005 ABC transporter 24 165 3.0E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS00885 517ad028773b3f1fdaa1efa7d0e6b6e7 308 PANTHER PTHR24220:SF0 9 228 1.2E-103 T 22-04-2016 SCD_RS00885 517ad028773b3f1fdaa1efa7d0e6b6e7 308 Gene3D G3DSA:3.40.50.300 3 227 6.5E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00885 517ad028773b3f1fdaa1efa7d0e6b6e7 308 PANTHER PTHR24220 9 228 1.2E-103 T 22-04-2016 SCD_RS00885 517ad028773b3f1fdaa1efa7d0e6b6e7 308 SMART SM00382 32 211 1.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS00885 517ad028773b3f1fdaa1efa7d0e6b6e7 308 SUPERFAMILY SSF52540 5 230 8.77E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS01040 a591b1d5240d2de5b404b5f70d36dc95 322 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 167 312 4.8E-25 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SCD_RS01040 a591b1d5240d2de5b404b5f70d36dc95 322 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 14 158 5.4E-35 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SCD_RS01040 a591b1d5240d2de5b404b5f70d36dc95 322 PANTHER PTHR11405 6 315 7.9E-118 T 22-04-2016 SCD_RS01040 a591b1d5240d2de5b404b5f70d36dc95 322 PANTHER PTHR11405:SF16 6 315 7.9E-118 T 22-04-2016 SCD_RS01040 a591b1d5240d2de5b404b5f70d36dc95 322 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 60 79 9.7E-18 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SCD_RS01040 a591b1d5240d2de5b404b5f70d36dc95 322 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 146 157 9.7E-18 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SCD_RS01040 a591b1d5240d2de5b404b5f70d36dc95 322 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 9.7E-18 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SCD_RS01040 a591b1d5240d2de5b404b5f70d36dc95 322 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 279 302 9.7E-18 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SCD_RS01040 a591b1d5240d2de5b404b5f70d36dc95 322 Gene3D G3DSA:3.40.50.1370 14 157 2.6E-47 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SCD_RS01040 a591b1d5240d2de5b404b5f70d36dc95 322 SUPERFAMILY SSF53671 13 315 4.19E-91 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SCD_RS01040 a591b1d5240d2de5b404b5f70d36dc95 322 Gene3D G3DSA:3.40.50.1370 158 292 1.3E-48 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SCD_RS01040 a591b1d5240d2de5b404b5f70d36dc95 322 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 14 314 1.5E-90 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS01040 a591b1d5240d2de5b404b5f70d36dc95 322 PRINTS PR00101 Aspartate carbamoyltransferase signature 145 162 3.1E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS01040 a591b1d5240d2de5b404b5f70d36dc95 322 PRINTS PR00101 Aspartate carbamoyltransferase signature 295 309 3.1E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS01040 a591b1d5240d2de5b404b5f70d36dc95 322 PRINTS PR00101 Aspartate carbamoyltransferase signature 88 97 3.1E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS01040 a591b1d5240d2de5b404b5f70d36dc95 322 PRINTS PR00101 Aspartate carbamoyltransferase signature 230 239 3.1E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS01040 a591b1d5240d2de5b404b5f70d36dc95 322 PRINTS PR00101 Aspartate carbamoyltransferase signature 50 72 3.1E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS01040 a591b1d5240d2de5b404b5f70d36dc95 322 PRINTS PR00101 Aspartate carbamoyltransferase signature 271 276 3.1E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS01040 a591b1d5240d2de5b404b5f70d36dc95 322 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 60 67 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SCD_RS01040 a591b1d5240d2de5b404b5f70d36dc95 322 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 13 316 40.443 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS09475 16f0850c357df9be341449e1288ac531 1025 SUPERFAMILY SSF82693 43 127 7.59E-19 T 22-04-2016 SCD_RS09475 16f0850c357df9be341449e1288ac531 1025 Gene3D G3DSA:3.30.2090.10 714 796 1.2E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS09475 16f0850c357df9be341449e1288ac531 1025 Gene3D G3DSA:3.30.2090.10 184 265 9.4E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS09475 16f0850c357df9be341449e1288ac531 1025 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1015 0.0 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 SCD_RS09475 16f0850c357df9be341449e1288ac531 1025 Gene3D G3DSA:1.10.3850.10 803 1017 8.0E-61 T 22-04-2016 SCD_RS09475 16f0850c357df9be341449e1288ac531 1025 Gene3D G3DSA:1.10.3850.10 278 497 3.3E-57 T 22-04-2016 SCD_RS09475 16f0850c357df9be341449e1288ac531 1025 SUPERFAMILY SSF82714 713 796 7.46E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS09475 16f0850c357df9be341449e1288ac531 1025 SUPERFAMILY SSF82866 291 496 7.85E-43 T 22-04-2016 SCD_RS09475 16f0850c357df9be341449e1288ac531 1025 PANTHER PTHR32063 2 1017 0.0 T 22-04-2016 SCD_RS09475 16f0850c357df9be341449e1288ac531 1025 Gene3D G3DSA:3.30.70.1430 44 142 7.6E-23 T 22-04-2016 SCD_RS09475 16f0850c357df9be341449e1288ac531 1025 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 1.01E-38 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS09475 16f0850c357df9be341449e1288ac531 1025 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 1.01E-38 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS09475 16f0850c357df9be341449e1288ac531 1025 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 1.01E-38 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS09475 16f0850c357df9be341449e1288ac531 1025 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.01E-38 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS09475 16f0850c357df9be341449e1288ac531 1025 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.01E-38 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS09475 16f0850c357df9be341449e1288ac531 1025 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 1.01E-38 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS09475 16f0850c357df9be341449e1288ac531 1025 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.01E-38 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS09475 16f0850c357df9be341449e1288ac531 1025 Pfam PF00873 AcrB/AcrD/AcrF family 5 1015 7.3E-298 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS09475 16f0850c357df9be341449e1288ac531 1025 SUPERFAMILY SSF82714 184 265 7.59E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS09475 16f0850c357df9be341449e1288ac531 1025 PANTHER PTHR32063:SF24 2 1017 0.0 T 22-04-2016 SCD_RS09475 16f0850c357df9be341449e1288ac531 1025 SUPERFAMILY SSF82693 139 182 2.07E-19 T 22-04-2016 SCD_RS09475 16f0850c357df9be341449e1288ac531 1025 SUPERFAMILY SSF82693 268 324 2.07E-19 T 22-04-2016 SCD_RS09475 16f0850c357df9be341449e1288ac531 1025 SUPERFAMILY SSF82866 796 1018 8.11E-58 T 22-04-2016 SCD_RS01935 b89b044a79acc8e6765876cad808e250 233 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 8 220 3.2E-68 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SCD_RS01935 b89b044a79acc8e6765876cad808e250 233 Gene3D G3DSA:1.20.58.220 5 109 1.3E-34 T 22-04-2016 SCD_RS01935 b89b044a79acc8e6765876cad808e250 233 SUPERFAMILY SSF109755 8 230 1.47E-69 T 22-04-2016 SCD_RS01935 b89b044a79acc8e6765876cad808e250 233 PANTHER PTHR10010:SF14 1 233 2.6E-71 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SCD_RS01935 b89b044a79acc8e6765876cad808e250 233 Pfam PF01895 PhoU domain 22 107 7.2E-20 T 22-04-2016 IPR026022 PhoU domain SCD_RS01935 b89b044a79acc8e6765876cad808e250 233 Pfam PF01895 PhoU domain 127 211 1.0E-14 T 22-04-2016 IPR026022 PhoU domain SCD_RS01935 b89b044a79acc8e6765876cad808e250 233 PANTHER PTHR10010 1 233 2.6E-71 T 22-04-2016 SCD_RS01935 b89b044a79acc8e6765876cad808e250 233 PIRSF PIRSF003107 3 225 3.3E-64 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SCD_RS01935 b89b044a79acc8e6765876cad808e250 233 Gene3D G3DSA:1.20.58.220 124 231 7.5E-30 T 22-04-2016 SCD_RS03220 18e194b4fa6082f696cc1e7e5319ea36 129 Gene3D G3DSA:3.30.420.80 7 129 1.5E-53 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SCD_RS03220 18e194b4fa6082f696cc1e7e5319ea36 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site SCD_RS03220 18e194b4fa6082f696cc1e7e5319ea36 129 PIRSF PIRSF002131 1 129 9.1E-52 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SCD_RS03220 18e194b4fa6082f696cc1e7e5319ea36 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.491 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SCD_RS03220 18e194b4fa6082f696cc1e7e5319ea36 129 PANTHER PTHR11759 11 129 2.4E-68 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SCD_RS03220 18e194b4fa6082f696cc1e7e5319ea36 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 2.2E-55 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03220 18e194b4fa6082f696cc1e7e5319ea36 129 Pfam PF00411 Ribosomal protein S11 19 128 7.3E-50 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SCD_RS03220 18e194b4fa6082f696cc1e7e5319ea36 129 SUPERFAMILY SSF53137 14 129 1.09E-46 T 22-04-2016 SCD_RS08065 c87030b92cc25bbde5be93bc6108fb37 397 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 7 135 9.2E-44 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SCD_RS08065 c87030b92cc25bbde5be93bc6108fb37 397 PIRSF PIRSF006205 4 395 3.7E-154 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SCD_RS08065 c87030b92cc25bbde5be93bc6108fb37 397 SUPERFAMILY SSF69055 299 391 6.8E-30 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SCD_RS08065 c87030b92cc25bbde5be93bc6108fb37 397 Pfam PF13288 DXP reductoisomerase C-terminal domain 269 385 7.8E-42 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SCD_RS08065 c87030b92cc25bbde5be93bc6108fb37 397 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 389 1.8E-157 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SCD_RS08065 c87030b92cc25bbde5be93bc6108fb37 397 SUPERFAMILY SSF51735 4 153 6.47E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS08065 c87030b92cc25bbde5be93bc6108fb37 397 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 149 237 2.2E-38 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SCD_RS08065 c87030b92cc25bbde5be93bc6108fb37 397 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 7 390 47.334 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SCD_RS08065 c87030b92cc25bbde5be93bc6108fb37 397 PANTHER PTHR30525 5 394 3.2E-214 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SCD_RS08065 c87030b92cc25bbde5be93bc6108fb37 397 Gene3D G3DSA:1.10.1740.10 312 392 6.4E-28 T 22-04-2016 SCD_RS08065 c87030b92cc25bbde5be93bc6108fb37 397 SUPERFAMILY SSF55347 129 272 4.25E-63 T 22-04-2016 SCD_RS08065 c87030b92cc25bbde5be93bc6108fb37 397 Gene3D G3DSA:3.40.50.720 3 153 6.7E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS00945 0ee421dcf3069190f40315962d085cae 232 Gene3D G3DSA:1.10.3810.10 60 228 1.9E-67 T 22-04-2016 SCD_RS00945 0ee421dcf3069190f40315962d085cae 232 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 13 231 2.6E-98 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 SCD_RS00945 0ee421dcf3069190f40315962d085cae 232 PANTHER PTHR30400 1 229 1.0E-76 T 22-04-2016 SCD_RS00945 0ee421dcf3069190f40315962d085cae 232 Pfam PF00912 Transglycosylase 59 226 3.2E-57 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SCD_RS00945 0ee421dcf3069190f40315962d085cae 232 SUPERFAMILY SSF53955 59 229 1.38E-59 T 22-04-2016 IPR023346 Lysozyme-like domain SCD_RS00945 0ee421dcf3069190f40315962d085cae 232 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 8 232 40.211 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 SCD_RS00945 0ee421dcf3069190f40315962d085cae 232 PANTHER PTHR30400:SF0 1 229 1.0E-76 T 22-04-2016 SCD_RS01745 719fce35ae72b6ca4d9f193c6d858275 392 SMART SM00710 88 109 320.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SCD_RS01745 719fce35ae72b6ca4d9f193c6d858275 392 SMART SM00710 182 203 24.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SCD_RS01745 719fce35ae72b6ca4d9f193c6d858275 392 SMART SM00710 204 227 1600.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SCD_RS01745 719fce35ae72b6ca4d9f193c6d858275 392 SMART SM00710 110 138 230.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SCD_RS01745 719fce35ae72b6ca4d9f193c6d858275 392 SMART SM00710 139 160 110.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SCD_RS01745 719fce35ae72b6ca4d9f193c6d858275 392 SMART SM00710 230 251 1400.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SCD_RS01745 719fce35ae72b6ca4d9f193c6d858275 392 SMART SM00710 257 278 640.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SCD_RS01745 719fce35ae72b6ca4d9f193c6d858275 392 SUPERFAMILY SSF51126 7 371 3.14E-62 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor SCD_RS01745 719fce35ae72b6ca4d9f193c6d858275 392 Pfam PF05048 Periplasmic copper-binding protein (NosD) 118 346 5.1E-43 T 22-04-2016 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain SCD_RS01745 719fce35ae72b6ca4d9f193c6d858275 392 SMART SM00722 26 166 5.6E-6 T 22-04-2016 IPR006633 Carbohydrate-binding/sugar hydrolysis domain SCD_RS01745 719fce35ae72b6ca4d9f193c6d858275 392 Gene3D G3DSA:2.160.20.10 8 316 4.2E-29 T 22-04-2016 IPR012334 Pectin lyase fold SCD_RS01745 719fce35ae72b6ca4d9f193c6d858275 392 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 8 383 4.0E-110 T 22-04-2016 IPR026464 Nitrous oxide reductase family maturation protein NosD SCD_RS01745 719fce35ae72b6ca4d9f193c6d858275 392 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 177 218 2.6E-6 T 22-04-2016 IPR022441 Parallel beta-helix repeat-2 SCD_RS00350 18c7b62aaaf5dcc33e6c317b41b80254 191 PANTHER PTHR33219:SF5 8 190 1.7E-30 T 22-04-2016 SCD_RS00350 18c7b62aaaf5dcc33e6c317b41b80254 191 Pfam PF02325 YGGT family 12 78 1.1E-16 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 SCD_RS00350 18c7b62aaaf5dcc33e6c317b41b80254 191 Pfam PF02325 YGGT family 114 177 6.6E-14 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 SCD_RS00350 18c7b62aaaf5dcc33e6c317b41b80254 191 PANTHER PTHR33219 8 190 1.7E-30 T 22-04-2016 SCD_RS10850 7af0f37bc178df7126b12e5b32d4343a 280 Pfam PF02649 Type I GTP cyclohydrolase folE2 21 271 3.3E-98 T 22-04-2016 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SCD_RS10850 7af0f37bc178df7126b12e5b32d4343a 280 PANTHER PTHR36445:SF1 16 277 1.3E-77 T 22-04-2016 SCD_RS10850 7af0f37bc178df7126b12e5b32d4343a 280 PANTHER PTHR36445 16 277 1.3E-77 T 22-04-2016 SCD_RS10850 7af0f37bc178df7126b12e5b32d4343a 280 Gene3D G3DSA:3.10.270.10 19 275 3.3E-110 T 22-04-2016 SCD_RS10850 7af0f37bc178df7126b12e5b32d4343a 280 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 20 276 38.646 T 22-04-2016 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SCD_RS09510 3777a6a18e8c9a60eb9ffd2c6ce0c2fd 163 SUPERFAMILY SSF54534 6 141 4.32E-23 T 22-04-2016 SCD_RS09510 3777a6a18e8c9a60eb9ffd2c6ce0c2fd 163 Gene3D G3DSA:3.10.50.40 4 84 3.3E-10 T 22-04-2016 SCD_RS09510 3777a6a18e8c9a60eb9ffd2c6ce0c2fd 163 Gene3D G3DSA:3.10.50.40 128 141 3.3E-10 T 22-04-2016 SCD_RS09510 3777a6a18e8c9a60eb9ffd2c6ce0c2fd 163 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 6 91 4.2E-5 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SCD_RS01940 a5c0825b1c37736e771707be4a972fee 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 48 212 6.2E-59 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SCD_RS01940 a5c0825b1c37736e771707be4a972fee 218 Gene3D G3DSA:3.40.50.1360 1 135 5.5E-56 T 22-04-2016 SCD_RS01940 a5c0825b1c37736e771707be4a972fee 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 213 1.6E-66 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SCD_RS01940 a5c0825b1c37736e771707be4a972fee 218 SUPERFAMILY SSF75445 126 197 2.35E-24 T 22-04-2016 SCD_RS01940 a5c0825b1c37736e771707be4a972fee 218 Gene3D G3DSA:3.30.70.260 136 195 2.4E-29 T 22-04-2016 SCD_RS01940 a5c0825b1c37736e771707be4a972fee 218 PANTHER PTHR11934 1 218 1.3E-126 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SCD_RS01940 a5c0825b1c37736e771707be4a972fee 218 PANTHER PTHR11934:SF11 1 218 1.3E-126 T 22-04-2016 SCD_RS01940 a5c0825b1c37736e771707be4a972fee 218 SUPERFAMILY SSF100950 1 145 2.93E-43 T 22-04-2016 SCD_RS01940 a5c0825b1c37736e771707be4a972fee 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 216 32.609 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SCD_RS05555 5a2699eadfd62355cd9ffbfb8d87c0fd 219 SUPERFAMILY SSF52738 22 210 1.12E-73 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SCD_RS05555 5a2699eadfd62355cd9ffbfb8d87c0fd 219 Pfam PF01339 CheB methylesterase 27 204 1.1E-62 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SCD_RS05555 5a2699eadfd62355cd9ffbfb8d87c0fd 219 PANTHER PTHR24421:SF4 3 209 1.2E-104 T 22-04-2016 SCD_RS05555 5a2699eadfd62355cd9ffbfb8d87c0fd 219 Gene3D G3DSA:3.40.50.180 21 210 1.0E-84 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SCD_RS05555 5a2699eadfd62355cd9ffbfb8d87c0fd 219 PANTHER PTHR24421 3 209 1.2E-104 T 22-04-2016 SCD_RS00735 a018e359869707babc6a5b168da30674 379 PIRSF PIRSF005572 2 378 1.6E-131 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SCD_RS00735 a018e359869707babc6a5b168da30674 379 PANTHER PTHR11601 4 378 1.4E-166 T 22-04-2016 SCD_RS00735 a018e359869707babc6a5b168da30674 379 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 194 213 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SCD_RS00735 a018e359869707babc6a5b168da30674 379 Pfam PF00266 Aminotransferase class-V 5 365 5.4E-79 T 22-04-2016 IPR000192 Aminotransferase class V domain SCD_RS00735 a018e359869707babc6a5b168da30674 379 Gene3D G3DSA:3.40.640.10 17 247 1.6E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS00735 a018e359869707babc6a5b168da30674 379 Gene3D G3DSA:3.90.1150.10 248 370 1.1E-37 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS00735 a018e359869707babc6a5b168da30674 379 SUPERFAMILY SSF53383 4 373 1.99E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS00735 a018e359869707babc6a5b168da30674 379 PANTHER PTHR11601:SF20 4 378 1.4E-166 T 22-04-2016 SCD_RS11625 91063bc8926acec06280f6b4b76dafed 123 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 102 2.8E-30 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SCD_RS11625 91063bc8926acec06280f6b4b76dafed 123 Gene3D G3DSA:3.40.30.10 3 102 7.6E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS11625 91063bc8926acec06280f6b4b76dafed 123 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SCD_RS11625 91063bc8926acec06280f6b4b76dafed 123 PANTHER PTHR10438 8 109 2.0E-39 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SCD_RS11625 91063bc8926acec06280f6b4b76dafed 123 PIRSF PIRSF000077 1 104 1.0E-27 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SCD_RS11625 91063bc8926acec06280f6b4b76dafed 123 Pfam PF00085 Thioredoxin 4 102 3.5E-27 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 SCD_RS11625 91063bc8926acec06280f6b4b76dafed 123 PRINTS PR00421 Thioredoxin family signature 68 79 5.2E-9 T 22-04-2016 SCD_RS11625 91063bc8926acec06280f6b4b76dafed 123 PRINTS PR00421 Thioredoxin family signature 29 38 5.2E-9 T 22-04-2016 SCD_RS11625 91063bc8926acec06280f6b4b76dafed 123 PRINTS PR00421 Thioredoxin family signature 21 29 5.2E-9 T 22-04-2016 SCD_RS11625 91063bc8926acec06280f6b4b76dafed 123 PANTHER PTHR10438:SF266 8 109 2.0E-39 T 22-04-2016 SCD_RS11625 91063bc8926acec06280f6b4b76dafed 123 SUPERFAMILY SSF52833 4 103 1.22E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS08265 8a10440bc8551ee497fe9efd80802f02 79 Gene3D G3DSA:3.40.1620.10 1 38 4.1E-15 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SCD_RS08265 8a10440bc8551ee497fe9efd80802f02 79 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 38 1.6E-12 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SCD_RS08265 8a10440bc8551ee497fe9efd80802f02 79 SUPERFAMILY SSF143120 1 42 1.83E-12 T 22-04-2016 SCD_RS08265 8a10440bc8551ee497fe9efd80802f02 79 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 48 1.2E-15 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SCD_RS06220 b55d881321d1809f278c7ffe6a81812e 382 PIRSF PIRSF005572 1 376 1.9E-129 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SCD_RS06220 b55d881321d1809f278c7ffe6a81812e 382 Pfam PF00266 Aminotransferase class-V 5 363 1.2E-76 T 22-04-2016 IPR000192 Aminotransferase class V domain SCD_RS06220 b55d881321d1809f278c7ffe6a81812e 382 Gene3D G3DSA:3.90.1150.10 246 367 1.1E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS06220 b55d881321d1809f278c7ffe6a81812e 382 SUPERFAMILY SSF53383 4 368 7.71E-99 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS06220 b55d881321d1809f278c7ffe6a81812e 382 PANTHER PTHR11601 5 377 1.5E-146 T 22-04-2016 SCD_RS06220 b55d881321d1809f278c7ffe6a81812e 382 Gene3D G3DSA:3.40.640.10 16 245 1.1E-82 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS06220 b55d881321d1809f278c7ffe6a81812e 382 PANTHER PTHR11601:SF20 5 377 1.5E-146 T 22-04-2016 SCD_RS06220 b55d881321d1809f278c7ffe6a81812e 382 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 192 211 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SCD_RS07740 3c6b0caf6366e9cc54c09e44d119ebb5 220 SUPERFAMILY SSF52833 34 211 9.67E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS07740 3c6b0caf6366e9cc54c09e44d119ebb5 220 PANTHER PTHR35891:SF2 8 214 2.3E-38 T 22-04-2016 SCD_RS07740 3c6b0caf6366e9cc54c09e44d119ebb5 220 PANTHER PTHR35891 8 214 2.3E-38 T 22-04-2016 SCD_RS07740 3c6b0caf6366e9cc54c09e44d119ebb5 220 Pfam PF01323 DSBA-like thioredoxin domain 70 196 3.2E-12 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 SCD_RS07740 3c6b0caf6366e9cc54c09e44d119ebb5 220 Gene3D G3DSA:3.40.30.10 36 216 5.0E-48 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS07740 3c6b0caf6366e9cc54c09e44d119ebb5 220 PIRSF PIRSF001488 10 218 4.2E-42 T 22-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL SCD_RS08560 5ef1d863ceefaddeb29afa00ac0ad4b6 270 SUPERFAMILY SSF52540 28 228 5.18E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08560 5ef1d863ceefaddeb29afa00ac0ad4b6 270 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 185 266 8.3E-30 T 22-04-2016 IPR013615 CbbQ/NirQ/NorQ, C-terminal SCD_RS08560 5ef1d863ceefaddeb29afa00ac0ad4b6 270 Pfam PF07728 AAA domain (dynein-related subfamily) 38 172 1.6E-31 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 SCD_RS08560 5ef1d863ceefaddeb29afa00ac0ad4b6 270 PANTHER PTHR22908 17 255 7.5E-41 T 22-04-2016 SCD_RS08560 5ef1d863ceefaddeb29afa00ac0ad4b6 270 Gene3D G3DSA:3.40.50.300 31 189 4.6E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 424 3.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 3.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 448 3.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 467 3.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 PANTHER PTHR22617 7 610 9.0E-183 T 22-04-2016 SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 469 2.3E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 SUPERFAMILY SSF55874 285 468 1.96E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 Pfam PF01584 CheW-like domain 475 597 3.0E-20 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 SUPERFAMILY SSF50341 469 596 3.14E-23 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 Gene3D G3DSA:2.40.50.180 494 533 7.6E-7 T 22-04-2016 SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 Gene3D G3DSA:1.10.287.560 214 283 7.2E-14 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 SMART SM01231 214 282 5.3E-12 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 SUPERFAMILY SSF47384 215 283 8.24E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 SMART SM00260 462 596 3.1E-22 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 215 282 7.2E-10 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 Pfam PF01627 Hpt domain 9 103 3.2E-16 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 Gene3D G3DSA:3.30.565.10 285 469 7.9E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 Gene3D G3DSA:1.20.120.160 7 140 2.0E-38 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 SMART SM00073 7 104 7.0E-23 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 SMART SM00387 327 470 1.5E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 SUPERFAMILY SSF47226 7 125 1.19E-29 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 Gene3D G3DSA:2.30.30.40 470 491 2.7E-16 T 22-04-2016 SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 Gene3D G3DSA:2.30.30.40 553 596 2.7E-16 T 22-04-2016 SCD_RS06040 ef7992424cac8102e42d3f1b8d75b313 610 PANTHER PTHR22617:SF6 7 610 9.0E-183 T 22-04-2016 SCD_RS12115 be5743a6867cbaf4d6b9ef3f4c321673 339 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 61.026 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SCD_RS12115 be5743a6867cbaf4d6b9ef3f4c321673 339 PANTHER PTHR11735 1 339 1.0E-145 T 22-04-2016 SCD_RS12115 be5743a6867cbaf4d6b9ef3f4c321673 339 SUPERFAMILY SSF53067 101 309 9.97E-44 T 22-04-2016 SCD_RS12115 be5743a6867cbaf4d6b9ef3f4c321673 339 SUPERFAMILY SSF53067 3 122 9.06E-29 T 22-04-2016 SCD_RS12115 be5743a6867cbaf4d6b9ef3f4c321673 339 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 2.2E-131 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SCD_RS12115 be5743a6867cbaf4d6b9ef3f4c321673 339 Gene3D G3DSA:3.30.420.40 1 159 6.4E-47 T 22-04-2016 SCD_RS12115 be5743a6867cbaf4d6b9ef3f4c321673 339 PANTHER PTHR11735:SF6 1 339 1.0E-145 T 22-04-2016 SCD_RS12115 be5743a6867cbaf4d6b9ef3f4c321673 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 4.2E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SCD_RS12115 be5743a6867cbaf4d6b9ef3f4c321673 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 4.2E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SCD_RS12115 be5743a6867cbaf4d6b9ef3f4c321673 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 4.2E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SCD_RS12115 be5743a6867cbaf4d6b9ef3f4c321673 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 4.2E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SCD_RS12115 be5743a6867cbaf4d6b9ef3f4c321673 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 4.2E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SCD_RS12115 be5743a6867cbaf4d6b9ef3f4c321673 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 4.2E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SCD_RS12115 be5743a6867cbaf4d6b9ef3f4c321673 339 Pfam PF00814 Glycoprotease family 24 307 3.5E-98 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SCD_RS12115 be5743a6867cbaf4d6b9ef3f4c321673 339 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 1.2E-113 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SCD_RS06240 289792bd5c8aceada47040430efffc45 177 Gene3D G3DSA:1.10.287.110 4 78 1.0E-26 T 22-04-2016 IPR001623 DnaJ domain SCD_RS06240 289792bd5c8aceada47040430efffc45 177 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 7 176 24.247 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 SCD_RS06240 289792bd5c8aceada47040430efffc45 177 SUPERFAMILY SSF47144 83 175 3.01E-23 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 SCD_RS06240 289792bd5c8aceada47040430efffc45 177 Pfam PF07743 HSCB C-terminal oligomerisation domain 93 168 1.1E-20 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 SCD_RS06240 289792bd5c8aceada47040430efffc45 177 PANTHER PTHR14021:SF15 4 169 4.8E-53 T 22-04-2016 SCD_RS06240 289792bd5c8aceada47040430efffc45 177 SUPERFAMILY SSF46565 7 80 1.96E-17 T 22-04-2016 IPR001623 DnaJ domain SCD_RS06240 289792bd5c8aceada47040430efffc45 177 Gene3D G3DSA:1.20.1280.20 87 176 1.1E-26 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 SCD_RS06240 289792bd5c8aceada47040430efffc45 177 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 19 170 3.9E-36 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 SCD_RS06240 289792bd5c8aceada47040430efffc45 177 PANTHER PTHR14021 4 169 4.8E-53 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 SCD_RS06240 289792bd5c8aceada47040430efffc45 177 SMART SM00271 7 72 2.0E-4 T 22-04-2016 IPR001623 DnaJ domain SCD_RS05765 f218f4ebb7bae110ab8caa59ce3a6448 669 Pfam PF00005 ABC transporter 377 529 1.6E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS05765 f218f4ebb7bae110ab8caa59ce3a6448 669 Pfam PF00005 ABC transporter 26 183 5.9E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS05765 f218f4ebb7bae110ab8caa59ce3a6448 669 SMART SM00382 385 586 3.2E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS05765 f218f4ebb7bae110ab8caa59ce3a6448 669 SMART SM00382 34 233 5.9E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS05765 f218f4ebb7bae110ab8caa59ce3a6448 669 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 319 1.3E-27 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SCD_RS05765 f218f4ebb7bae110ab8caa59ce3a6448 669 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 578 665 2.6E-27 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SCD_RS05765 f218f4ebb7bae110ab8caa59ce3a6448 669 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 299 3.8E-17 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SCD_RS05765 f218f4ebb7bae110ab8caa59ce3a6448 669 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 580 645 1.6E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SCD_RS05765 f218f4ebb7bae110ab8caa59ce3a6448 669 SUPERFAMILY SSF52540 5 255 8.05E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05765 f218f4ebb7bae110ab8caa59ce3a6448 669 SUPERFAMILY SSF52540 349 600 3.28E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05765 f218f4ebb7bae110ab8caa59ce3a6448 669 PANTHER PTHR24220 376 486 6.7E-161 T 22-04-2016 SCD_RS05765 f218f4ebb7bae110ab8caa59ce3a6448 669 PANTHER PTHR24220 7 288 6.7E-161 T 22-04-2016 SCD_RS05765 f218f4ebb7bae110ab8caa59ce3a6448 669 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS05765 f218f4ebb7bae110ab8caa59ce3a6448 669 ProSitePatterns PS00211 ABC transporters family signature. 501 515 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS05765 f218f4ebb7bae110ab8caa59ce3a6448 669 PANTHER PTHR24220:SF336 376 486 6.7E-161 T 22-04-2016 SCD_RS05765 f218f4ebb7bae110ab8caa59ce3a6448 669 PANTHER PTHR24220:SF336 7 288 6.7E-161 T 22-04-2016 SCD_RS05765 f218f4ebb7bae110ab8caa59ce3a6448 669 Gene3D G3DSA:3.40.50.300 348 602 1.4E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05765 f218f4ebb7bae110ab8caa59ce3a6448 669 Gene3D G3DSA:3.40.50.300 4 256 4.0E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04480 7ee56476dca8f0a2ae5a88d653625178 376 SUPERFAMILY SSF46565 1 105 2.62E-37 T 22-04-2016 IPR001623 DnaJ domain SCD_RS04480 7ee56476dca8f0a2ae5a88d653625178 376 Gene3D G3DSA:2.10.230.10 145 212 3.3E-24 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SCD_RS04480 7ee56476dca8f0a2ae5a88d653625178 376 SMART SM00271 4 62 3.7E-31 T 22-04-2016 IPR001623 DnaJ domain SCD_RS04480 7ee56476dca8f0a2ae5a88d653625178 376 SUPERFAMILY SSF49493 120 153 1.1E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SCD_RS04480 7ee56476dca8f0a2ae5a88d653625178 376 SUPERFAMILY SSF49493 214 257 1.1E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SCD_RS04480 7ee56476dca8f0a2ae5a88d653625178 376 Gene3D G3DSA:1.10.287.110 1 104 7.9E-38 T 22-04-2016 IPR001623 DnaJ domain SCD_RS04480 7ee56476dca8f0a2ae5a88d653625178 376 Pfam PF00226 DnaJ domain 5 67 9.6E-29 T 22-04-2016 IPR001623 DnaJ domain SCD_RS04480 7ee56476dca8f0a2ae5a88d653625178 376 PRINTS PR00625 DnaJ domain signature 7 25 2.3E-32 T 22-04-2016 IPR001623 DnaJ domain SCD_RS04480 7ee56476dca8f0a2ae5a88d653625178 376 PRINTS PR00625 DnaJ domain signature 62 81 2.3E-32 T 22-04-2016 IPR001623 DnaJ domain SCD_RS04480 7ee56476dca8f0a2ae5a88d653625178 376 PRINTS PR00625 DnaJ domain signature 25 40 2.3E-32 T 22-04-2016 IPR001623 DnaJ domain SCD_RS04480 7ee56476dca8f0a2ae5a88d653625178 376 PRINTS PR00625 DnaJ domain signature 42 62 2.3E-32 T 22-04-2016 IPR001623 DnaJ domain SCD_RS04480 7ee56476dca8f0a2ae5a88d653625178 376 Pfam PF01556 DnaJ C terminal domain 122 334 7.9E-45 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal SCD_RS04480 7ee56476dca8f0a2ae5a88d653625178 376 PANTHER PTHR24078:SF190 1 368 1.5E-157 T 22-04-2016 SCD_RS04480 7ee56476dca8f0a2ae5a88d653625178 376 Pfam PF00684 DnaJ central domain 148 208 4.3E-14 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SCD_RS04480 7ee56476dca8f0a2ae5a88d653625178 376 SUPERFAMILY SSF49493 259 345 6.28E-23 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SCD_RS04480 7ee56476dca8f0a2ae5a88d653625178 376 PANTHER PTHR24078 1 368 1.5E-157 T 22-04-2016 SCD_RS04480 7ee56476dca8f0a2ae5a88d653625178 376 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 350 1.3E-140 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SCD_RS04480 7ee56476dca8f0a2ae5a88d653625178 376 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 373 42.042 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SCD_RS04480 7ee56476dca8f0a2ae5a88d653625178 376 Gene3D G3DSA:2.60.260.20 214 255 4.1E-22 T 22-04-2016 SCD_RS04480 7ee56476dca8f0a2ae5a88d653625178 376 Gene3D G3DSA:2.60.260.20 257 334 2.1E-23 T 22-04-2016 SCD_RS04480 7ee56476dca8f0a2ae5a88d653625178 376 Gene3D G3DSA:2.60.260.20 116 144 4.1E-22 T 22-04-2016 SCD_RS04480 7ee56476dca8f0a2ae5a88d653625178 376 SUPERFAMILY SSF57938 135 212 3.14E-22 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SCD_RS04480 7ee56476dca8f0a2ae5a88d653625178 376 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 22-04-2016 IPR018253 DnaJ domain, conserved site SCD_RS05195 c46e23b8110797f6bd4f0ee24b8e3a73 257 SUPERFAMILY SSF53098 3 227 5.82E-46 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS05195 c46e23b8110797f6bd4f0ee24b8e3a73 257 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 47 256 4.5E-96 T 22-04-2016 IPR019288 Predicted 3'-5' exonuclease, PolB-like SCD_RS05195 c46e23b8110797f6bd4f0ee24b8e3a73 257 Gene3D G3DSA:3.30.420.10 4 214 2.7E-34 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS06355 c5244e1e3e24647a3fe8c58446597ed6 520 Gene3D G3DSA:3.40.50.620 218 394 4.6E-58 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS06355 c5244e1e3e24647a3fe8c58446597ed6 520 PRINTS PR00096 Glutamine amidotransferase superfamily signature 172 185 1.1E-7 T 22-04-2016 SCD_RS06355 c5244e1e3e24647a3fe8c58446597ed6 520 PRINTS PR00096 Glutamine amidotransferase superfamily signature 76 87 1.1E-7 T 22-04-2016 SCD_RS06355 c5244e1e3e24647a3fe8c58446597ed6 520 PRINTS PR00096 Glutamine amidotransferase superfamily signature 49 58 1.1E-7 T 22-04-2016 SCD_RS06355 c5244e1e3e24647a3fe8c58446597ed6 520 Pfam PF00117 Glutamine amidotransferase class-I 7 193 4.7E-38 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SCD_RS06355 c5244e1e3e24647a3fe8c58446597ed6 520 PANTHER PTHR11922 1 517 2.0E-286 T 22-04-2016 SCD_RS06355 c5244e1e3e24647a3fe8c58446597ed6 520 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 76 92 2.1E-5 T 22-04-2016 SCD_RS06355 c5244e1e3e24647a3fe8c58446597ed6 520 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 46 60 2.1E-5 T 22-04-2016 SCD_RS06355 c5244e1e3e24647a3fe8c58446597ed6 520 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 5 19 2.1E-5 T 22-04-2016 SCD_RS06355 c5244e1e3e24647a3fe8c58446597ed6 520 Gene3D G3DSA:3.40.50.880 2 217 1.5E-58 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SCD_RS06355 c5244e1e3e24647a3fe8c58446597ed6 520 PANTHER PTHR11922:SF2 1 517 2.0E-286 T 22-04-2016 SCD_RS06355 c5244e1e3e24647a3fe8c58446597ed6 520 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 5 199 3.4E-76 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SCD_RS06355 c5244e1e3e24647a3fe8c58446597ed6 520 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 208 520 5.5E-148 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SCD_RS06355 c5244e1e3e24647a3fe8c58446597ed6 520 Pfam PF00958 GMP synthase C terminal domain 428 519 2.8E-43 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SCD_RS06355 c5244e1e3e24647a3fe8c58446597ed6 520 Gene3D G3DSA:3.30.300.10 396 520 1.4E-53 T 22-04-2016 SCD_RS06355 c5244e1e3e24647a3fe8c58446597ed6 520 SUPERFAMILY SSF52402 192 414 2.87E-58 T 22-04-2016 SCD_RS06355 c5244e1e3e24647a3fe8c58446597ed6 520 SUPERFAMILY SSF52317 1 232 8.62E-57 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SCD_RS06355 c5244e1e3e24647a3fe8c58446597ed6 520 Pfam PF02540 NAD synthase 216 287 8.0E-9 T 22-04-2016 IPR022310 NAD/GMP synthase SCD_RS06355 c5244e1e3e24647a3fe8c58446597ed6 520 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 2 520 55.707 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SCD_RS06355 c5244e1e3e24647a3fe8c58446597ed6 520 PRINTS PR00097 Anthranilate synthase component II signature 172 185 1.3E-6 T 22-04-2016 SCD_RS06355 c5244e1e3e24647a3fe8c58446597ed6 520 PRINTS PR00097 Anthranilate synthase component II signature 76 87 1.3E-6 T 22-04-2016 SCD_RS06355 c5244e1e3e24647a3fe8c58446597ed6 520 PRINTS PR00097 Anthranilate synthase component II signature 49 58 1.3E-6 T 22-04-2016 SCD_RS06355 c5244e1e3e24647a3fe8c58446597ed6 520 SUPERFAMILY SSF54810 400 520 3.01E-50 T 22-04-2016 SCD_RS04580 4c662ef8ba98866b44e06be076d571dc 151 Pfam PF13664 Domain of unknown function (DUF4149) 12 109 1.1E-17 T 22-04-2016 IPR025423 Domain of unknown function DUF4149 SCD_RS15550 7fb2f24c2466610c6f2f6c14511b2448 677 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 510 671 2.6E-50 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15550 7fb2f24c2466610c6f2f6c14511b2448 677 SUPERFAMILY SSF55785 383 501 1.68E-24 T 22-04-2016 IPR000014 PAS domain SCD_RS15550 7fb2f24c2466610c6f2f6c14511b2448 677 Pfam PF00990 Diguanylate cyclase, GGDEF domain 514 669 3.6E-53 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15550 7fb2f24c2466610c6f2f6c14511b2448 677 SMART SM00304 333 385 5.7E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS15550 7fb2f24c2466610c6f2f6c14511b2448 677 Pfam PF00989 PAS fold 392 500 1.1E-12 T 22-04-2016 IPR013767 PAS fold GO:0006355 SCD_RS15550 7fb2f24c2466610c6f2f6c14511b2448 677 PANTHER PTHR10799:SF710 317 494 9.0E-36 T 22-04-2016 SCD_RS15550 7fb2f24c2466610c6f2f6c14511b2448 677 PANTHER PTHR10799:SF710 10 23 9.0E-36 T 22-04-2016 SCD_RS15550 7fb2f24c2466610c6f2f6c14511b2448 677 PANTHER PTHR10799:SF710 547 670 9.0E-36 T 22-04-2016 SCD_RS15550 7fb2f24c2466610c6f2f6c14511b2448 677 SMART SM00267 503 674 1.8E-68 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15550 7fb2f24c2466610c6f2f6c14511b2448 677 SUPERFAMILY SSF55073 519 672 1.18E-50 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS15550 7fb2f24c2466610c6f2f6c14511b2448 677 Pfam PF00672 HAMP domain 314 381 1.7E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS15550 7fb2f24c2466610c6f2f6c14511b2448 677 Gene3D G3DSA:3.30.450.20 386 501 8.2E-27 T 22-04-2016 SCD_RS15550 7fb2f24c2466610c6f2f6c14511b2448 677 PANTHER PTHR10799 317 494 9.0E-36 T 22-04-2016 SCD_RS15550 7fb2f24c2466610c6f2f6c14511b2448 677 PANTHER PTHR10799 10 23 9.0E-36 T 22-04-2016 SCD_RS15550 7fb2f24c2466610c6f2f6c14511b2448 677 PANTHER PTHR10799 547 670 9.0E-36 T 22-04-2016 SCD_RS15550 7fb2f24c2466610c6f2f6c14511b2448 677 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 388 509 8.5E-23 T 22-04-2016 IPR000014 PAS domain SCD_RS15550 7fb2f24c2466610c6f2f6c14511b2448 677 SUPERFAMILY SSF158472 339 384 4.05E-7 T 22-04-2016 SCD_RS15550 7fb2f24c2466610c6f2f6c14511b2448 677 Gene3D G3DSA:3.30.70.270 515 674 1.3E-58 T 22-04-2016 SCD_RS15550 7fb2f24c2466610c6f2f6c14511b2448 677 SMART SM00091 392 458 6.8E-12 T 22-04-2016 IPR000014 PAS domain SCD_RS12505 923fef30a7be5d6e542d6111fedd8a0b 315 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SCD_RS12505 923fef30a7be5d6e542d6111fedd8a0b 315 PANTHER PTHR22854 203 314 2.2E-91 T 22-04-2016 SCD_RS12505 923fef30a7be5d6e542d6111fedd8a0b 315 PANTHER PTHR22854 1 149 2.2E-91 T 22-04-2016 SCD_RS12505 923fef30a7be5d6e542d6111fedd8a0b 315 Gene3D G3DSA:3.20.20.70 1 148 5.0E-101 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS12505 923fef30a7be5d6e542d6111fedd8a0b 315 Gene3D G3DSA:3.20.20.70 202 314 5.0E-101 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS12505 923fef30a7be5d6e542d6111fedd8a0b 315 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 149 7.0E-49 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SCD_RS12505 923fef30a7be5d6e542d6111fedd8a0b 315 Pfam PF00218 Indole-3-glycerol phosphate synthase 202 310 1.0E-35 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SCD_RS12505 923fef30a7be5d6e542d6111fedd8a0b 315 PANTHER PTHR22854:SF2 203 314 2.2E-91 T 22-04-2016 SCD_RS12505 923fef30a7be5d6e542d6111fedd8a0b 315 PANTHER PTHR22854:SF2 1 149 2.2E-91 T 22-04-2016 SCD_RS12505 923fef30a7be5d6e542d6111fedd8a0b 315 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 315 33.392 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SCD_RS12505 923fef30a7be5d6e542d6111fedd8a0b 315 SUPERFAMILY SSF51366 13 149 8.36E-44 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SCD_RS12505 923fef30a7be5d6e542d6111fedd8a0b 315 SUPERFAMILY SSF51366 201 314 3.14E-34 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SCD_RS00095 df6080a8656219e266c6fe2ea194cc00 881 Pfam PF01433 Peptidase family M1 121 390 2.6E-62 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SCD_RS00095 df6080a8656219e266c6fe2ea194cc00 881 SUPERFAMILY SSF55486 210 454 1.16E-75 T 22-04-2016 SCD_RS00095 df6080a8656219e266c6fe2ea194cc00 881 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 300 315 9.3E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SCD_RS00095 df6080a8656219e266c6fe2ea194cc00 881 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 182 197 9.3E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SCD_RS00095 df6080a8656219e266c6fe2ea194cc00 881 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 264 274 9.3E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SCD_RS00095 df6080a8656219e266c6fe2ea194cc00 881 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 319 331 9.3E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SCD_RS00095 df6080a8656219e266c6fe2ea194cc00 881 Pfam PF11940 Domain of unknown function (DUF3458) 465 837 1.1E-145 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal SCD_RS00095 df6080a8656219e266c6fe2ea194cc00 881 PANTHER PTHR11533 4 596 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 SCD_RS00095 df6080a8656219e266c6fe2ea194cc00 881 PANTHER PTHR11533 620 880 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 SCD_RS00095 df6080a8656219e266c6fe2ea194cc00 881 PANTHER PTHR11533:SF152 4 596 0.0 T 22-04-2016 SCD_RS00095 df6080a8656219e266c6fe2ea194cc00 881 PANTHER PTHR11533:SF152 620 880 0.0 T 22-04-2016 SCD_RS00095 df6080a8656219e266c6fe2ea194cc00 881 Gene3D G3DSA:1.10.390.10 314 456 7.6E-31 T 22-04-2016 SCD_RS00095 df6080a8656219e266c6fe2ea194cc00 881 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 13 879 0.0 T 22-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 SCD_RS00095 df6080a8656219e266c6fe2ea194cc00 881 SUPERFAMILY SSF63737 6 198 4.45E-39 T 22-04-2016 SCD_RS00095 df6080a8656219e266c6fe2ea194cc00 881 Gene3D G3DSA:1.25.50.10 557 880 3.8E-129 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal SCD_RS03135 fb3fd30a2a9031192da768581e94dc95 236 SMART SM00322 60 125 5.5E-7 T 22-04-2016 IPR004087 K Homology domain GO:0003676 SCD_RS03135 fb3fd30a2a9031192da768581e94dc95 236 Gene3D G3DSA:3.30.300.20 17 107 1.7E-32 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SCD_RS03135 fb3fd30a2a9031192da768581e94dc95 236 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 207 3.7E-95 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 SCD_RS03135 fb3fd30a2a9031192da768581e94dc95 236 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.0E-41 T 22-04-2016 SCD_RS03135 fb3fd30a2a9031192da768581e94dc95 236 Gene3D G3DSA:3.30.1140.32 108 206 9.1E-47 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 SCD_RS03135 fb3fd30a2a9031192da768581e94dc95 236 PANTHER PTHR11760 2 236 3.1E-131 T 22-04-2016 SCD_RS03135 fb3fd30a2a9031192da768581e94dc95 236 Pfam PF07650 KH domain 38 110 2.6E-19 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 SCD_RS03135 fb3fd30a2a9031192da768581e94dc95 236 SUPERFAMILY SSF54814 2 106 7.33E-38 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SCD_RS03135 fb3fd30a2a9031192da768581e94dc95 236 SUPERFAMILY SSF54821 108 206 1.96E-40 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 SCD_RS03135 fb3fd30a2a9031192da768581e94dc95 236 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.58 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 SCD_RS03135 fb3fd30a2a9031192da768581e94dc95 236 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site SCD_RS03135 fb3fd30a2a9031192da768581e94dc95 236 PANTHER PTHR11760:SF19 2 236 3.1E-131 T 22-04-2016 SCD_RS06525 b5805acd6e4cad1163e98c236d6e6d2c 503 PANTHER PTHR30258 17 500 1.6E-237 T 22-04-2016 SCD_RS06525 b5805acd6e4cad1163e98c236d6e6d2c 503 Gene3D G3DSA:3.40.50.300 232 499 1.3E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06525 b5805acd6e4cad1163e98c236d6e6d2c 503 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 15 497 9.4E-219 T 22-04-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 SCD_RS06525 b5805acd6e4cad1163e98c236d6e6d2c 503 SUPERFAMILY SSF52540 109 497 3.24E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06525 b5805acd6e4cad1163e98c236d6e6d2c 503 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 321 335 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SCD_RS06525 b5805acd6e4cad1163e98c236d6e6d2c 503 PANTHER PTHR30258:SF9 17 500 1.6E-237 T 22-04-2016 SCD_RS06525 b5805acd6e4cad1163e98c236d6e6d2c 503 SUPERFAMILY SSF160246 16 79 3.14E-10 T 22-04-2016 SCD_RS06525 b5805acd6e4cad1163e98c236d6e6d2c 503 Pfam PF00437 Type II/IV secretion system protein 129 393 5.2E-83 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SCD_RS06525 b5805acd6e4cad1163e98c236d6e6d2c 503 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 8 83 4.2E-6 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 SCD_RS06525 b5805acd6e4cad1163e98c236d6e6d2c 503 Gene3D G3DSA:3.30.450.90 97 226 1.9E-52 T 22-04-2016 SCD_RS06525 b5805acd6e4cad1163e98c236d6e6d2c 503 SMART SM00382 254 375 2.0E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS14350 bd192918d1fa13eebd009441be81174d 347 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 15 342 1.5E-153 T 22-04-2016 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 SCD_RS14350 bd192918d1fa13eebd009441be81174d 347 Gene3D G3DSA:3.90.1210.10 291 347 1.8E-20 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal SCD_RS14350 bd192918d1fa13eebd009441be81174d 347 SUPERFAMILY SSF51269 287 347 9.42E-17 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal SCD_RS14350 bd192918d1fa13eebd009441be81174d 347 SUPERFAMILY SSF51569 2 300 1.26E-89 T 22-04-2016 SCD_RS14350 bd192918d1fa13eebd009441be81174d 347 Pfam PF08666 SAF domain 291 342 1.8E-9 T 22-04-2016 IPR013974 SAF domain SCD_RS14350 bd192918d1fa13eebd009441be81174d 347 PANTHER PTHR23416:SF62 1 300 1.0E-99 T 22-04-2016 SCD_RS14350 bd192918d1fa13eebd009441be81174d 347 SMART SM00858 290 347 5.8E-6 T 22-04-2016 IPR013974 SAF domain SCD_RS14350 bd192918d1fa13eebd009441be81174d 347 Gene3D G3DSA:3.20.20.70 1 274 1.1E-109 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS14350 bd192918d1fa13eebd009441be81174d 347 Pfam PF03102 NeuB family 35 275 9.3E-89 T 22-04-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 SCD_RS14350 bd192918d1fa13eebd009441be81174d 347 PANTHER PTHR23416 1 300 1.0E-99 T 22-04-2016 SCD_RS10710 275ed52cecec1f9c70ed074804442f86 54 PRINTS PR00163 Rubredoxin signature 33 49 1.4E-9 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 SCD_RS10710 275ed52cecec1f9c70ed074804442f86 54 PRINTS PR00163 Rubredoxin signature 3 19 1.4E-9 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 SCD_RS10710 275ed52cecec1f9c70ed074804442f86 54 Gene3D G3DSA:2.20.28.10 1 53 7.3E-27 T 22-04-2016 IPR004039 Rubredoxin-type fold SCD_RS10710 275ed52cecec1f9c70ed074804442f86 54 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 22-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 SCD_RS10710 275ed52cecec1f9c70ed074804442f86 54 SUPERFAMILY SSF57802 1 53 6.73E-23 T 22-04-2016 SCD_RS10710 275ed52cecec1f9c70ed074804442f86 54 Pfam PF00301 Rubredoxin 4 49 4.4E-23 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 SCD_RS10710 275ed52cecec1f9c70ed074804442f86 54 PIRSF PIRSF000071 1 54 1.4E-26 T 22-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 SCD_RS02670 3854276b4c0a8168ee5b7caee31e6206 254 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SCD_RS02670 3854276b4c0a8168ee5b7caee31e6206 254 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SCD_RS02670 3854276b4c0a8168ee5b7caee31e6206 254 Pfam PF01026 TatD related DNase 3 250 3.7E-70 T 22-04-2016 IPR001130 TatD family GO:0016788 SCD_RS02670 3854276b4c0a8168ee5b7caee31e6206 254 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 187 203 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SCD_RS02670 3854276b4c0a8168ee5b7caee31e6206 254 Gene3D G3DSA:3.20.20.140 1 250 3.7E-81 T 22-04-2016 SCD_RS02670 3854276b4c0a8168ee5b7caee31e6206 254 PIRSF PIRSF005902 1 253 9.2E-70 T 22-04-2016 IPR001130 TatD family GO:0016788 SCD_RS02670 3854276b4c0a8168ee5b7caee31e6206 254 PANTHER PTHR10060 1 254 2.4E-83 T 22-04-2016 IPR001130 TatD family GO:0016788 SCD_RS02670 3854276b4c0a8168ee5b7caee31e6206 254 SUPERFAMILY SSF51556 2 250 2.03E-80 T 22-04-2016 IPR032466 Metal-dependent hydrolase SCD_RS02670 3854276b4c0a8168ee5b7caee31e6206 254 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 251 8.7E-62 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 SCD_RS07880 95a0476e6904722ce0807d174a9b4896 282 PANTHER PTHR30373:SF2 25 282 8.5E-73 T 22-04-2016 SCD_RS07880 95a0476e6904722ce0807d174a9b4896 282 PANTHER PTHR30373 25 282 8.5E-73 T 22-04-2016 SCD_RS07880 95a0476e6904722ce0807d174a9b4896 282 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 38 161 4.9E-39 T 22-04-2016 IPR007621 TPM domain SCD_RS06590 b7b6e4005863bfc05b0f46b79e16c831 584 PANTHER PTHR32309:SF13 1 326 4.4E-36 T 22-04-2016 SCD_RS06590 b7b6e4005863bfc05b0f46b79e16c831 584 PANTHER PTHR32309:SF13 383 538 4.4E-36 T 22-04-2016 SCD_RS06590 b7b6e4005863bfc05b0f46b79e16c831 584 Pfam PF02706 Chain length determinant protein 7 162 1.8E-6 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 SCD_RS06590 b7b6e4005863bfc05b0f46b79e16c831 584 PANTHER PTHR32309 1 326 4.4E-36 T 22-04-2016 SCD_RS06590 b7b6e4005863bfc05b0f46b79e16c831 584 PANTHER PTHR32309 383 538 4.4E-36 T 22-04-2016 SCD_RS06590 b7b6e4005863bfc05b0f46b79e16c831 584 Pfam PF13807 G-rich domain on putative tyrosine kinase 420 499 8.2E-7 T 22-04-2016 IPR032807 Tyrosine kinase, G-rich domain SCD_RS07480 47c4e79ca7b3fed69b35d44bdb64c20e 533 Gene3D G3DSA:3.40.50.300 450 510 1.8E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07480 47c4e79ca7b3fed69b35d44bdb64c20e 533 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 360 8.8E-24 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 SCD_RS07480 47c4e79ca7b3fed69b35d44bdb64c20e 533 Gene3D G3DSA:1.20.272.10 243 358 2.7E-37 T 22-04-2016 SCD_RS07480 47c4e79ca7b3fed69b35d44bdb64c20e 533 Gene3D G3DSA:1.10.8.60 167 242 3.8E-32 T 22-04-2016 SCD_RS07480 47c4e79ca7b3fed69b35d44bdb64c20e 533 SMART SM00382 37 179 4.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS07480 47c4e79ca7b3fed69b35d44bdb64c20e 533 SUPERFAMILY SSF48019 244 359 6.63E-28 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SCD_RS07480 47c4e79ca7b3fed69b35d44bdb64c20e 533 PANTHER PTHR11669:SF0 1 397 3.4E-169 T 22-04-2016 SCD_RS07480 47c4e79ca7b3fed69b35d44bdb64c20e 533 SUPERFAMILY SSF52540 34 224 7.98E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07480 47c4e79ca7b3fed69b35d44bdb64c20e 533 Pfam PF13177 DNA polymerase III, delta subunit 20 178 8.9E-44 T 22-04-2016 SCD_RS07480 47c4e79ca7b3fed69b35d44bdb64c20e 533 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 410 530 3.1E-16 T 22-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS07480 47c4e79ca7b3fed69b35d44bdb64c20e 533 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 8.9E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SCD_RS07480 47c4e79ca7b3fed69b35d44bdb64c20e 533 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 8.9E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SCD_RS07480 47c4e79ca7b3fed69b35d44bdb64c20e 533 PANTHER PTHR11669 1 397 3.4E-169 T 22-04-2016 SCD_RS07480 47c4e79ca7b3fed69b35d44bdb64c20e 533 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 1.9E-132 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 SCD_RS07480 47c4e79ca7b3fed69b35d44bdb64c20e 533 Gene3D G3DSA:3.40.50.300 1 166 9.9E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 PANTHER PTHR24423 235 1199 3.1E-155 T 22-04-2016 SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 Pfam PF00989 PAS fold 552 662 4.7E-16 T 22-04-2016 IPR013767 PAS fold GO:0006355 SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 Pfam PF00989 PAS fold 289 412 3.9E-15 T 22-04-2016 IPR013767 PAS fold GO:0006355 SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 Pfam PF08447 PAS fold 450 537 1.0E-24 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 Gene3D G3DSA:3.30.450.20 411 559 1.2E-33 T 22-04-2016 SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 SUPERFAMILY SSF55785 557 663 1.16E-28 T 22-04-2016 IPR000014 PAS domain SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 Gene3D G3DSA:3.40.50.2300 1167 1279 6.3E-14 T 22-04-2016 SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 Gene3D G3DSA:3.30.450.20 560 663 7.1E-27 T 22-04-2016 SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 Pfam PF13426 PAS domain 688 795 9.2E-11 T 22-04-2016 IPR000014 PAS domain SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 Pfam PF13426 PAS domain 169 272 8.2E-15 T 22-04-2016 IPR000014 PAS domain SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 PRINTS PR00344 Bacterial sensor protein C-terminal signature 988 1006 5.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 PRINTS PR00344 Bacterial sensor protein C-terminal signature 953 967 5.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 PRINTS PR00344 Bacterial sensor protein C-terminal signature 971 981 5.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 SUPERFAMILY SSF55785 662 794 9.42E-23 T 22-04-2016 IPR000014 PAS domain SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 Gene3D G3DSA:3.30.450.20 272 410 7.9E-28 T 22-04-2016 SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 SMART SM00448 1042 1156 1.9E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 SMART SM00448 1168 1275 5.9E-5 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 SUPERFAMILY SSF52172 1041 1162 2.85E-23 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 SUPERFAMILY SSF47384 789 871 2.16E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 446 549 5.6E-11 T 22-04-2016 IPR000014 PAS domain SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 680 800 6.3E-15 T 22-04-2016 IPR000014 PAS domain SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 289 422 1.3E-18 T 22-04-2016 IPR000014 PAS domain SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 155 281 1.7E-31 T 22-04-2016 IPR000014 PAS domain SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 550 672 8.4E-25 T 22-04-2016 IPR000014 PAS domain SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 917 1025 8.1E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 Gene3D G3DSA:3.30.565.10 857 1029 5.9E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 SUPERFAMILY SSF55785 271 413 3.77E-25 T 22-04-2016 IPR000014 PAS domain SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 Gene3D G3DSA:3.40.50.2300 1040 1166 5.7E-25 T 22-04-2016 SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 SMART SM00387 916 1028 3.1E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 Pfam PF00512 His Kinase A (phospho-acceptor) domain 802 870 3.1E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 PANTHER PTHR24423:SF442 235 1199 3.1E-155 T 22-04-2016 SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 SMART SM00388 802 870 7.4E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 Pfam PF00072 Response regulator receiver domain 1044 1156 8.9E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 Pfam PF00072 Response regulator receiver domain 1170 1249 2.9E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 SUPERFAMILY SSF55785 169 281 7.68E-30 T 22-04-2016 IPR000014 PAS domain SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 Gene3D G3DSA:3.30.450.20 664 793 2.1E-21 T 22-04-2016 SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 Gene3D G3DSA:3.30.450.20 149 271 7.7E-29 T 22-04-2016 SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 SUPERFAMILY SSF52172 1167 1278 5.55E-15 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 SUPERFAMILY SSF55785 412 541 1.18E-23 T 22-04-2016 IPR000014 PAS domain SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 SUPERFAMILY SSF55874 859 1028 3.27E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 SMART SM00086 234 274 79.0 T 22-04-2016 IPR001610 PAC motif SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 SMART SM00086 623 665 1.0E-7 T 22-04-2016 IPR001610 PAC motif SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 SMART SM00086 373 415 3.6E-12 T 22-04-2016 IPR001610 PAC motif SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 SMART SM00086 501 543 3.8E-8 T 22-04-2016 IPR001610 PAC motif SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 SMART SM00086 755 796 0.0081 T 22-04-2016 IPR001610 PAC motif SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 SMART SM00091 677 746 2.7E-6 T 22-04-2016 IPR000014 PAS domain SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 SMART SM00091 286 354 9.4E-7 T 22-04-2016 IPR000014 PAS domain SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 SMART SM00091 158 224 9.6E-10 T 22-04-2016 IPR000014 PAS domain SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 SMART SM00091 427 495 6.5E-5 T 22-04-2016 IPR000014 PAS domain SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 SMART SM00091 551 617 4.1E-8 T 22-04-2016 IPR000014 PAS domain SCD_RS15665 88c0e06afc7e8eaf1097b191934626e2 1282 Gene3D G3DSA:1.10.287.130 794 856 7.2E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS01395 5ce5900fbb851d955829ea3b231a1a4b 436 SUPERFAMILY SSF47384 193 271 3.14E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS01395 5ce5900fbb851d955829ea3b231a1a4b 436 SMART SM00091 98 164 0.0013 T 22-04-2016 IPR000014 PAS domain SCD_RS01395 5ce5900fbb851d955829ea3b231a1a4b 436 PANTHER PTHR24423:SF554 5 428 6.4E-124 T 22-04-2016 SCD_RS01395 5ce5900fbb851d955829ea3b231a1a4b 436 Gene3D G3DSA:3.30.565.10 259 426 5.4E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS01395 5ce5900fbb851d955829ea3b231a1a4b 436 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 9.4E-135 T 22-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 SCD_RS01395 5ce5900fbb851d955829ea3b231a1a4b 436 SMART SM00388 205 272 8.3E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS01395 5ce5900fbb851d955829ea3b231a1a4b 436 Gene3D G3DSA:3.30.450.20 93 196 5.8E-10 T 22-04-2016 SCD_RS01395 5ce5900fbb851d955829ea3b231a1a4b 436 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 3.5E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS01395 5ce5900fbb851d955829ea3b231a1a4b 436 SUPERFAMILY SSF55785 90 197 9.42E-10 T 22-04-2016 IPR000014 PAS domain SCD_RS01395 5ce5900fbb851d955829ea3b231a1a4b 436 Pfam PF13188 PAS domain 98 147 2.0E-5 T 22-04-2016 IPR000014 PAS domain SCD_RS01395 5ce5900fbb851d955829ea3b231a1a4b 436 SMART SM00387 316 428 5.6E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS01395 5ce5900fbb851d955829ea3b231a1a4b 436 SUPERFAMILY SSF55874 262 426 1.44E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS01395 5ce5900fbb851d955829ea3b231a1a4b 436 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 426 1.0E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS01395 5ce5900fbb851d955829ea3b231a1a4b 436 Pfam PF11808 Domain of unknown function (DUF3329) 5 90 2.6E-17 T 22-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 SCD_RS01395 5ce5900fbb851d955829ea3b231a1a4b 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 1.8E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS01395 5ce5900fbb851d955829ea3b231a1a4b 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 1.8E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS01395 5ce5900fbb851d955829ea3b231a1a4b 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 1.8E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS01395 5ce5900fbb851d955829ea3b231a1a4b 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 1.8E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS01395 5ce5900fbb851d955829ea3b231a1a4b 436 Gene3D G3DSA:1.10.287.130 197 258 1.1E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS01395 5ce5900fbb851d955829ea3b231a1a4b 436 PANTHER PTHR24423 5 428 6.4E-124 T 22-04-2016 SCD_RS08180 2b06943d1e75317c570c0ff59ff9d511 735 PANTHER PTHR23083 11 351 1.7E-92 T 22-04-2016 SCD_RS08180 2b06943d1e75317c570c0ff59ff9d511 735 SUPERFAMILY SSF48452 90 325 1.67E-55 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS08180 2b06943d1e75317c570c0ff59ff9d511 735 Pfam PF13414 TPR repeat 266 302 2.1E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS08180 2b06943d1e75317c570c0ff59ff9d511 735 SUPERFAMILY SSF48452 9 111 9.49E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS08180 2b06943d1e75317c570c0ff59ff9d511 735 Pfam PF13844 Glycosyl transferase family 41 375 511 3.0E-27 T 22-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 SCD_RS08180 2b06943d1e75317c570c0ff59ff9d511 735 Pfam PF13844 Glycosyl transferase family 41 545 725 1.5E-17 T 22-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 SCD_RS08180 2b06943d1e75317c570c0ff59ff9d511 735 Pfam PF00515 Tetratricopeptide repeat 50 83 1.4E-8 T 22-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 SCD_RS08180 2b06943d1e75317c570c0ff59ff9d511 735 Pfam PF13181 Tetratricopeptide repeat 153 185 0.0025 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS08180 2b06943d1e75317c570c0ff59ff9d511 735 Gene3D G3DSA:1.25.40.10 13 162 6.6E-50 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS08180 2b06943d1e75317c570c0ff59ff9d511 735 Gene3D G3DSA:1.25.40.10 163 328 8.2E-56 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS08180 2b06943d1e75317c570c0ff59ff9d511 735 SMART SM00028 186 219 3.6E-6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS08180 2b06943d1e75317c570c0ff59ff9d511 735 SMART SM00028 84 117 5.0E-6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS08180 2b06943d1e75317c570c0ff59ff9d511 735 SMART SM00028 50 83 1.1E-7 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS08180 2b06943d1e75317c570c0ff59ff9d511 735 SMART SM00028 288 321 6.9 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS08180 2b06943d1e75317c570c0ff59ff9d511 735 SMART SM00028 254 287 2.8E-10 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS08180 2b06943d1e75317c570c0ff59ff9d511 735 SMART SM00028 118 151 2.6E-8 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS08180 2b06943d1e75317c570c0ff59ff9d511 735 SMART SM00028 152 185 0.0072 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS08180 2b06943d1e75317c570c0ff59ff9d511 735 SMART SM00028 220 253 1.4E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS08180 2b06943d1e75317c570c0ff59ff9d511 735 SMART SM00028 16 49 0.011 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS08180 2b06943d1e75317c570c0ff59ff9d511 735 Pfam PF13424 Tetratricopeptide repeat 188 251 6.1E-14 T 22-04-2016 SCD_RS08180 2b06943d1e75317c570c0ff59ff9d511 735 Pfam PF13424 Tetratricopeptide repeat 84 149 5.7E-11 T 22-04-2016 SCD_RS04245 c61ddc3df4f18eb6a865bc427eb2a351 885 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 884 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 SCD_RS04245 c61ddc3df4f18eb6a865bc427eb2a351 885 Gene3D G3DSA:3.40.50.970 469 701 6.8E-121 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS04245 c61ddc3df4f18eb6a865bc427eb2a351 885 PIRSF PIRSF000156 1 885 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 SCD_RS04245 c61ddc3df4f18eb6a865bc427eb2a351 885 Gene3D G3DSA:3.40.50.920 703 884 4.1E-79 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SCD_RS04245 c61ddc3df4f18eb6a865bc427eb2a351 885 SUPERFAMILY SSF52518 470 696 9.18E-98 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS04245 c61ddc3df4f18eb6a865bc427eb2a351 885 Gene3D G3DSA:3.40.50.970 55 465 1.7E-156 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS04245 c61ddc3df4f18eb6a865bc427eb2a351 885 SUPERFAMILY SSF52922 698 884 4.08E-63 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SCD_RS04245 c61ddc3df4f18eb6a865bc427eb2a351 885 PANTHER PTHR11624 550 765 0.0 T 22-04-2016 IPR033247 Transketolase family SCD_RS04245 c61ddc3df4f18eb6a865bc427eb2a351 885 PANTHER PTHR11624 360 447 0.0 T 22-04-2016 IPR033247 Transketolase family SCD_RS04245 c61ddc3df4f18eb6a865bc427eb2a351 885 PANTHER PTHR11624 72 291 0.0 T 22-04-2016 IPR033247 Transketolase family SCD_RS04245 c61ddc3df4f18eb6a865bc427eb2a351 885 PANTHER PTHR11624 468 532 0.0 T 22-04-2016 IPR033247 Transketolase family SCD_RS04245 c61ddc3df4f18eb6a865bc427eb2a351 885 PANTHER PTHR11624 784 867 0.0 T 22-04-2016 IPR033247 Transketolase family SCD_RS04245 c61ddc3df4f18eb6a865bc427eb2a351 885 PANTHER PTHR11624:SF67 550 765 0.0 T 22-04-2016 SCD_RS04245 c61ddc3df4f18eb6a865bc427eb2a351 885 PANTHER PTHR11624:SF67 360 447 0.0 T 22-04-2016 SCD_RS04245 c61ddc3df4f18eb6a865bc427eb2a351 885 PANTHER PTHR11624:SF67 72 291 0.0 T 22-04-2016 SCD_RS04245 c61ddc3df4f18eb6a865bc427eb2a351 885 PANTHER PTHR11624:SF67 468 532 0.0 T 22-04-2016 SCD_RS04245 c61ddc3df4f18eb6a865bc427eb2a351 885 PANTHER PTHR11624:SF67 784 867 0.0 T 22-04-2016 SCD_RS04245 c61ddc3df4f18eb6a865bc427eb2a351 885 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 80 294 3.9E-7 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SCD_RS04245 c61ddc3df4f18eb6a865bc427eb2a351 885 SUPERFAMILY SSF52518 55 463 2.44E-141 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 379 501 8.4E-17 T 22-04-2016 IPR000014 PAS domain SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 PANTHER PTHR10799 466 775 4.3E-102 T 22-04-2016 SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 SUPERFAMILY SSF141868 680 929 3.66E-97 T 22-04-2016 IPR001633 EAL domain SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 SMART SM00267 494 665 4.6E-68 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 SUPERFAMILY SSF55785 386 501 2.44E-22 T 22-04-2016 IPR000014 PAS domain SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 Pfam PF00672 HAMP domain 290 357 8.1E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 Pfam PF00072 Response regulator receiver domain 947 1056 1.7E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 SMART SM00448 944 1056 9.1E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 Gene3D G3DSA:3.40.50.2300 945 1065 1.0E-28 T 22-04-2016 SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 SMART SM00304 308 361 5.7E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 Pfam PF00989 PAS fold 377 491 1.4E-13 T 22-04-2016 IPR013767 PAS fold GO:0006355 SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 Pfam PF02743 Cache domain 45 257 4.2E-12 T 22-04-2016 IPR033479 Double Cache domain 1 SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 Pfam PF00563 EAL domain 682 916 3.7E-74 T 22-04-2016 IPR001633 EAL domain SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 Gene3D G3DSA:3.20.20.450 678 928 5.7E-107 T 22-04-2016 IPR001633 EAL domain SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 SUPERFAMILY SSF52172 943 1060 1.57E-29 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 501 663 7.5E-45 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 Gene3D G3DSA:3.30.450.20 376 492 6.6E-24 T 22-04-2016 SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 Gene3D G3DSA:3.30.450.20 86 175 1.7E-14 T 22-04-2016 SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 SUPERFAMILY SSF158472 310 358 5.36E-7 T 22-04-2016 SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 PANTHER PTHR10799:SF774 466 775 4.3E-102 T 22-04-2016 SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 SMART SM00091 375 441 5.7E-9 T 22-04-2016 IPR000014 PAS domain SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 Pfam PF00990 Diguanylate cyclase, GGDEF domain 505 660 9.3E-50 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 Gene3D G3DSA:3.30.70.270 506 672 1.3E-58 T 22-04-2016 SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 SUPERFAMILY SSF55073 510 667 3.61E-51 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS15820 e0d0e1343d515918eec9202ba5db6c8b 1071 SMART SM00052 675 921 6.1E-129 T 22-04-2016 IPR001633 EAL domain SCD_RS14235 effe1910576c5419caa5fb8f3c560bd4 255 PANTHER PTHR10108 203 242 6.2E-14 T 22-04-2016 SCD_RS14235 effe1910576c5419caa5fb8f3c560bd4 255 PANTHER PTHR10108 171 183 6.2E-14 T 22-04-2016 SCD_RS14235 effe1910576c5419caa5fb8f3c560bd4 255 PANTHER PTHR10108:SF705 171 183 6.2E-14 T 22-04-2016 SCD_RS14235 effe1910576c5419caa5fb8f3c560bd4 255 Pfam PF13649 Methyltransferase domain 41 140 4.8E-15 T 22-04-2016 SCD_RS14235 effe1910576c5419caa5fb8f3c560bd4 255 SUPERFAMILY SSF53335 2 254 3.65E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS14235 effe1910576c5419caa5fb8f3c560bd4 255 Gene3D G3DSA:3.40.50.150 208 236 2.6E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS14235 effe1910576c5419caa5fb8f3c560bd4 255 Gene3D G3DSA:3.40.50.150 2 167 2.6E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS14235 effe1910576c5419caa5fb8f3c560bd4 255 PANTHER PTHR10108:SF705 2 155 6.2E-14 T 22-04-2016 SCD_RS14235 effe1910576c5419caa5fb8f3c560bd4 255 PANTHER PTHR10108:SF705 203 242 6.2E-14 T 22-04-2016 SCD_RS14235 effe1910576c5419caa5fb8f3c560bd4 255 PANTHER PTHR10108 2 155 6.2E-14 T 22-04-2016 SCD_RS05160 3fe7d7c2c4c922d48c18e105266d5c86 103 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 23 83 3.7E-21 T 22-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain SCD_RS05160 3fe7d7c2c4c922d48c18e105266d5c86 103 PANTHER PTHR21180 21 89 1.5E-23 T 22-04-2016 SCD_RS05160 3fe7d7c2c4c922d48c18e105266d5c86 103 Pfam PF12836 Helix-hairpin-helix motif 20 82 1.5E-22 T 22-04-2016 SCD_RS05160 3fe7d7c2c4c922d48c18e105266d5c86 103 SUPERFAMILY SSF47781 17 88 5.11E-29 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SCD_RS05160 3fe7d7c2c4c922d48c18e105266d5c86 103 Gene3D G3DSA:1.10.150.320 15 85 7.3E-23 T 22-04-2016 SCD_RS05160 3fe7d7c2c4c922d48c18e105266d5c86 103 SMART SM00278 61 80 0.15 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SCD_RS05160 3fe7d7c2c4c922d48c18e105266d5c86 103 SMART SM00278 31 50 2.4 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SCD_RS04600 9fc5536064b5eb948d4ea1254c691e63 278 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 50 63 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 SCD_RS04600 9fc5536064b5eb948d4ea1254c691e63 278 PANTHER PTHR20941 12 275 7.9E-115 T 22-04-2016 SCD_RS04600 9fc5536064b5eb948d4ea1254c691e63 278 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 16 31 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 SCD_RS04600 9fc5536064b5eb948d4ea1254c691e63 278 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 16 269 1.1E-97 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 SCD_RS04600 9fc5536064b5eb948d4ea1254c691e63 278 PANTHER PTHR20941:SF1 12 275 7.9E-115 T 22-04-2016 SCD_RS04600 9fc5536064b5eb948d4ea1254c691e63 278 Gene3D G3DSA:3.20.20.20 11 273 1.1E-106 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 SCD_RS04600 9fc5536064b5eb948d4ea1254c691e63 278 SUPERFAMILY SSF51717 2 272 6.28E-103 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 SCD_RS04600 9fc5536064b5eb948d4ea1254c691e63 278 Pfam PF00809 Pterin binding enzyme 17 255 2.2E-82 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 SCD_RS06205 d3a686bbe483948a794216e259cdc056 248 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 7 241 2.0E-69 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SCD_RS06205 d3a686bbe483948a794216e259cdc056 248 Gene3D G3DSA:3.40.1280.10 8 163 6.7E-32 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SCD_RS06205 d3a686bbe483948a794216e259cdc056 248 SUPERFAMILY SSF75217 8 169 1.77E-35 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SCD_RS06205 d3a686bbe483948a794216e259cdc056 248 PANTHER PTHR12029 8 186 6.2E-32 T 22-04-2016 SCD_RS06205 d3a686bbe483948a794216e259cdc056 248 PIRSF PIRSF004808 5 247 9.7E-72 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SCD_RS06205 d3a686bbe483948a794216e259cdc056 248 Pfam PF00588 SpoU rRNA Methylase family 10 159 7.6E-34 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SCD_RS12340 b7062d97741a548f1092859b12a6d488 345 PANTHER PTHR11647 2 323 1.3E-169 T 22-04-2016 SCD_RS12340 b7062d97741a548f1092859b12a6d488 345 Pfam PF01979 Amidohydrolase family 11 306 1.4E-18 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SCD_RS12340 b7062d97741a548f1092859b12a6d488 345 PIRSF PIRSF001237 1 345 2.9E-142 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS12340 b7062d97741a548f1092859b12a6d488 345 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS12340 b7062d97741a548f1092859b12a6d488 345 PANTHER PTHR11647:SF59 2 323 1.3E-169 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS12340 b7062d97741a548f1092859b12a6d488 345 Gene3D G3DSA:3.20.20.140 2 344 1.0E-135 T 22-04-2016 SCD_RS12340 b7062d97741a548f1092859b12a6d488 345 Hamap MF_00219 Dihydroorotase [pyrC]. 2 344 43.133 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS12340 b7062d97741a548f1092859b12a6d488 345 SUPERFAMILY SSF51556 1 343 2.55E-146 T 22-04-2016 IPR032466 Metal-dependent hydrolase SCD_RS12340 b7062d97741a548f1092859b12a6d488 345 ProSitePatterns PS00483 Dihydroorotase signature 2. 246 257 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS12340 b7062d97741a548f1092859b12a6d488 345 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 3 343 5.4E-143 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS06630 c6c06a9f41963a462d0b7bab8104ce83 408 SUPERFAMILY SSF53756 4 387 3.71E-47 T 22-04-2016 SCD_RS06630 c6c06a9f41963a462d0b7bab8104ce83 408 Pfam PF00534 Glycosyl transferases group 1 199 330 1.3E-20 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SCD_RS06630 c6c06a9f41963a462d0b7bab8104ce83 408 PANTHER PTHR12526 3 389 2.9E-26 T 22-04-2016 SCD_RS06630 c6c06a9f41963a462d0b7bab8104ce83 408 Gene3D G3DSA:3.40.50.2000 205 318 1.2E-13 T 22-04-2016 SCD_RS04615 f9e8dee85dee1f3cdb5a951a88fc3d64 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 275 6.5E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SCD_RS04615 f9e8dee85dee1f3cdb5a951a88fc3d64 281 PANTHER PTHR30425:SF0 1 277 8.0E-120 T 22-04-2016 SCD_RS04615 f9e8dee85dee1f3cdb5a951a88fc3d64 281 SUPERFAMILY SSF161098 21 270 7.38E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SCD_RS04615 f9e8dee85dee1f3cdb5a951a88fc3d64 281 Gene3D G3DSA:1.10.3720.10 14 277 3.2E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SCD_RS04615 f9e8dee85dee1f3cdb5a951a88fc3d64 281 PANTHER PTHR30425 1 277 8.0E-120 T 22-04-2016 SCD_RS04615 f9e8dee85dee1f3cdb5a951a88fc3d64 281 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 13 276 2.5E-87 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 PANTHER PTHR11014 328 482 3.4E-136 T 22-04-2016 SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 PANTHER PTHR11014 3 182 3.4E-136 T 22-04-2016 SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 PANTHER PTHR11014 201 276 3.4E-136 T 22-04-2016 SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 Gene3D G3DSA:3.40.630.10 395 481 4.7E-92 T 22-04-2016 SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 Gene3D G3DSA:3.40.630.10 2 178 4.7E-92 T 22-04-2016 SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 Pfam PF07687 Peptidase dimerisation domain 207 275 1.1E-7 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 SUPERFAMILY SSF53187 395 482 3.14E-57 T 22-04-2016 SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 SUPERFAMILY SSF53187 8 179 3.14E-57 T 22-04-2016 SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 PRINTS PR00934 X-His dipeptidase (M25) signature 98 116 1.5E-64 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 PRINTS PR00934 X-His dipeptidase (M25) signature 77 96 1.5E-64 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 PRINTS PR00934 X-His dipeptidase (M25) signature 426 442 1.5E-64 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 PRINTS PR00934 X-His dipeptidase (M25) signature 132 149 1.5E-64 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 PRINTS PR00934 X-His dipeptidase (M25) signature 156 174 1.5E-64 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 PRINTS PR00934 X-His dipeptidase (M25) signature 448 470 1.5E-64 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 PRINTS PR00934 X-His dipeptidase (M25) signature 248 267 1.5E-64 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 PRINTS PR00934 X-His dipeptidase (M25) signature 203 220 1.5E-64 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 SUPERFAMILY SSF55031 199 297 3.14E-6 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 PIRSF PIRSF016599 1 482 2.0E-171 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 Pfam PF01546 Peptidase family M20/M25/M40 70 478 3.0E-15 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 Gene3D G3DSA:3.30.70.360 197 277 4.9E-4 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 4 480 3.3E-154 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 PANTHER PTHR11014:SF54 328 482 3.4E-136 T 22-04-2016 SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 PANTHER PTHR11014:SF54 3 182 3.4E-136 T 22-04-2016 SCD_RS06780 674353e575b2c1331dcca11ddaba5e4c 483 PANTHER PTHR11014:SF54 201 276 3.4E-136 T 22-04-2016 SCD_RS03260 74c09fd85f152773818f9b074cf9669d 296 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 1 265 2.6E-86 T 22-04-2016 IPR019991 GTP-binding protein, ribosome biogenesis SCD_RS03260 74c09fd85f152773818f9b074cf9669d 296 Gene3D G3DSA:1.10.1580.10 167 259 1.9E-24 T 22-04-2016 IPR023179 GTP-binding protein, orthogonal bundle domain SCD_RS03260 74c09fd85f152773818f9b074cf9669d 296 PANTHER PTHR11089 10 264 2.7E-57 T 22-04-2016 SCD_RS03260 74c09fd85f152773818f9b074cf9669d 296 SUPERFAMILY SSF52540 5 179 1.22E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03260 74c09fd85f152773818f9b074cf9669d 296 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 110 130 3.8E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS03260 74c09fd85f152773818f9b074cf9669d 296 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 156 171 3.8E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS03260 74c09fd85f152773818f9b074cf9669d 296 PIRSF PIRSF006230 1 270 6.3E-81 T 22-04-2016 IPR016478 GTPase, MTG1 SCD_RS03260 74c09fd85f152773818f9b074cf9669d 296 Gene3D G3DSA:3.40.50.300 6 164 4.2E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03260 74c09fd85f152773818f9b074cf9669d 296 Pfam PF01926 50S ribosome-binding GTPase 109 175 1.7E-15 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS11120 b7e321664cecd4b28f4e4b1c46655f62 211 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 70 154 3.3E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS11120 b7e321664cecd4b28f4e4b1c46655f62 211 SUPERFAMILY SSF46626 1 178 1.6E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS11120 b7e321664cecd4b28f4e4b1c46655f62 211 Gene3D G3DSA:1.10.760.10 66 159 6.7E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS07960 a1e5a9c7ac7a2e678c717954e2b5ebbe 506 Gene3D G3DSA:3.30.450.20 3 72 9.4E-8 T 22-04-2016 SCD_RS07960 a1e5a9c7ac7a2e678c717954e2b5ebbe 506 Pfam PF00990 Diguanylate cyclase, GGDEF domain 327 497 3.0E-42 T 22-04-2016 IPR000160 GGDEF domain SCD_RS07960 a1e5a9c7ac7a2e678c717954e2b5ebbe 506 SUPERFAMILY SSF55785 2 81 1.24E-8 T 22-04-2016 IPR000014 PAS domain SCD_RS07960 a1e5a9c7ac7a2e678c717954e2b5ebbe 506 SMART SM00267 316 502 2.6E-54 T 22-04-2016 IPR000160 GGDEF domain SCD_RS07960 a1e5a9c7ac7a2e678c717954e2b5ebbe 506 SMART SM00086 274 316 0.0047 T 22-04-2016 IPR001610 PAC motif SCD_RS07960 a1e5a9c7ac7a2e678c717954e2b5ebbe 506 SMART SM00086 153 195 5.9E-10 T 22-04-2016 IPR001610 PAC motif SCD_RS07960 a1e5a9c7ac7a2e678c717954e2b5ebbe 506 SMART SM00086 32 73 1.3 T 22-04-2016 IPR001610 PAC motif SCD_RS07960 a1e5a9c7ac7a2e678c717954e2b5ebbe 506 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 324 501 4.2E-41 T 22-04-2016 IPR000160 GGDEF domain SCD_RS07960 a1e5a9c7ac7a2e678c717954e2b5ebbe 506 SUPERFAMILY SSF55073 332 504 3.69E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS07960 a1e5a9c7ac7a2e678c717954e2b5ebbe 506 SUPERFAMILY SSF55785 211 313 7.33E-28 T 22-04-2016 IPR000014 PAS domain SCD_RS07960 a1e5a9c7ac7a2e678c717954e2b5ebbe 506 Gene3D G3DSA:3.30.450.20 96 193 3.0E-31 T 22-04-2016 SCD_RS07960 a1e5a9c7ac7a2e678c717954e2b5ebbe 506 SUPERFAMILY SSF55785 90 195 2.54E-29 T 22-04-2016 IPR000014 PAS domain SCD_RS07960 a1e5a9c7ac7a2e678c717954e2b5ebbe 506 Gene3D G3DSA:3.30.70.270 329 504 6.9E-53 T 22-04-2016 SCD_RS07960 a1e5a9c7ac7a2e678c717954e2b5ebbe 506 Pfam PF13426 PAS domain 213 314 3.2E-15 T 22-04-2016 IPR000014 PAS domain SCD_RS07960 a1e5a9c7ac7a2e678c717954e2b5ebbe 506 Pfam PF13426 PAS domain 92 194 4.3E-22 T 22-04-2016 IPR000014 PAS domain SCD_RS07960 a1e5a9c7ac7a2e678c717954e2b5ebbe 506 SMART SM00091 81 147 4.4E-4 T 22-04-2016 IPR000014 PAS domain SCD_RS07960 a1e5a9c7ac7a2e678c717954e2b5ebbe 506 SMART SM00091 202 268 0.044 T 22-04-2016 IPR000014 PAS domain SCD_RS07960 a1e5a9c7ac7a2e678c717954e2b5ebbe 506 Pfam PF08448 PAS fold 3 72 6.6E-6 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS07960 a1e5a9c7ac7a2e678c717954e2b5ebbe 506 PANTHER PTHR24423 62 327 1.6E-37 T 22-04-2016 SCD_RS07960 a1e5a9c7ac7a2e678c717954e2b5ebbe 506 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 92 202 7.2E-19 T 22-04-2016 IPR000014 PAS domain SCD_RS07960 a1e5a9c7ac7a2e678c717954e2b5ebbe 506 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 208 320 1.7E-17 T 22-04-2016 IPR000014 PAS domain SCD_RS07960 a1e5a9c7ac7a2e678c717954e2b5ebbe 506 PANTHER PTHR24423:SF382 62 327 1.6E-37 T 22-04-2016 SCD_RS07960 a1e5a9c7ac7a2e678c717954e2b5ebbe 506 Gene3D G3DSA:3.30.450.20 194 308 6.4E-27 T 22-04-2016 SCD_RS15740 86b8ec73b6828e18dbdec2aa2ffe0621 244 SUPERFAMILY SSF75169 126 243 2.88E-10 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS15740 86b8ec73b6828e18dbdec2aa2ffe0621 244 Gene3D G3DSA:3.40.1260.10 125 244 3.6E-19 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS15740 86b8ec73b6828e18dbdec2aa2ffe0621 244 PANTHER PTHR37691:SF1 70 244 4.7E-14 T 22-04-2016 SCD_RS15740 86b8ec73b6828e18dbdec2aa2ffe0621 244 PANTHER PTHR37691 70 244 4.7E-14 T 22-04-2016 SCD_RS00330 88664f36a0b1857b7fbb652f76ec3b4f 137 PANTHER PTHR33653:SF1 1 135 1.3E-26 T 22-04-2016 SCD_RS00330 88664f36a0b1857b7fbb652f76ec3b4f 137 PANTHER PTHR33653 1 135 1.3E-26 T 22-04-2016 SCD_RS00330 88664f36a0b1857b7fbb652f76ec3b4f 137 Gene3D G3DSA:3.40.50.1010 1 133 4.1E-16 T 22-04-2016 IPR029060 PIN domain-like SCD_RS00330 88664f36a0b1857b7fbb652f76ec3b4f 137 Pfam PF01850 PIN domain 3 125 7.1E-15 T 22-04-2016 IPR002716 PIN domain SCD_RS00330 88664f36a0b1857b7fbb652f76ec3b4f 137 SUPERFAMILY SSF88723 1 135 2.55E-27 T 22-04-2016 IPR029060 PIN domain-like SCD_RS00330 88664f36a0b1857b7fbb652f76ec3b4f 137 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 134 10.239 T 22-04-2016 IPR022907 VapC family GO:0004540 SCD_RS03645 d94b3b3c31d0d342f4c7147baa458148 67 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03645 d94b3b3c31d0d342f4c7147baa458148 67 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 7.7E-34 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03645 d94b3b3c31d0d342f4c7147baa458148 67 PANTHER PTHR33280:SF2 1 66 6.4E-36 T 22-04-2016 SCD_RS03645 d94b3b3c31d0d342f4c7147baa458148 67 SUPERFAMILY SSF143800 1 66 1.02E-26 T 22-04-2016 SCD_RS03645 d94b3b3c31d0d342f4c7147baa458148 67 PANTHER PTHR33280 1 66 6.4E-36 T 22-04-2016 SCD_RS03645 d94b3b3c31d0d342f4c7147baa458148 67 Pfam PF01197 Ribosomal protein L31 1 65 1.2E-31 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03645 d94b3b3c31d0d342f4c7147baa458148 67 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.8E-21 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03645 d94b3b3c31d0d342f4c7147baa458148 67 PRINTS PR01249 Ribosomal protein L31 signature 46 64 1.8E-21 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03645 d94b3b3c31d0d342f4c7147baa458148 67 PRINTS PR01249 Ribosomal protein L31 signature 31 46 1.8E-21 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03645 d94b3b3c31d0d342f4c7147baa458148 67 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 67 28.507 T 22-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS11450 cbdb013d00c9005a8ef24c20e469b01f 408 PIRSF PIRSF003180 2 405 1.6E-97 T 22-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing SCD_RS11450 cbdb013d00c9005a8ef24c20e469b01f 408 PANTHER PTHR33525 4 369 5.8E-61 T 22-04-2016 SCD_RS11450 cbdb013d00c9005a8ef24c20e469b01f 408 SUPERFAMILY SSF109604 186 402 1.88E-33 T 22-04-2016 SCD_RS11450 cbdb013d00c9005a8ef24c20e469b01f 408 Pfam PF00563 EAL domain 57 194 3.3E-6 T 22-04-2016 IPR001633 EAL domain SCD_RS11450 cbdb013d00c9005a8ef24c20e469b01f 408 PANTHER PTHR33525:SF4 4 369 5.8E-61 T 22-04-2016 SCD_RS11450 cbdb013d00c9005a8ef24c20e469b01f 408 Gene3D G3DSA:3.20.20.450 102 186 5.7E-5 T 22-04-2016 IPR001633 EAL domain SCD_RS11450 cbdb013d00c9005a8ef24c20e469b01f 408 Gene3D G3DSA:1.10.3150.10 187 402 4.6E-28 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS11450 cbdb013d00c9005a8ef24c20e469b01f 408 Pfam PF08668 HDOD domain 219 328 1.4E-10 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS11450 cbdb013d00c9005a8ef24c20e469b01f 408 SUPERFAMILY SSF141868 3 199 4.05E-21 T 22-04-2016 IPR001633 EAL domain SCD_RS10175 72507d88a6558cf10fef2d8014d4ebc9 114 SUPERFAMILY SSF54534 4 113 3.14E-48 T 22-04-2016 SCD_RS10175 72507d88a6558cf10fef2d8014d4ebc9 114 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 21 111 1.0E-38 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SCD_RS10175 72507d88a6558cf10fef2d8014d4ebc9 114 Gene3D G3DSA:3.10.50.40 3 113 3.9E-52 T 22-04-2016 SCD_RS10175 72507d88a6558cf10fef2d8014d4ebc9 114 PANTHER PTHR10516 3 113 4.8E-64 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SCD_RS02785 76de5282dbae1ae701a2d3c150f49853 173 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 10 162 2.5E-51 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SCD_RS02785 76de5282dbae1ae701a2d3c150f49853 173 PANTHER PTHR21485 5 162 1.4E-53 T 22-04-2016 SCD_RS02785 76de5282dbae1ae701a2d3c150f49853 173 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 11 124 4.3E-13 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA SCD_RS02785 76de5282dbae1ae701a2d3c150f49853 173 SUPERFAMILY SSF56784 7 166 2.0E-41 T 22-04-2016 IPR023214 HAD-like domain SCD_RS02785 76de5282dbae1ae701a2d3c150f49853 173 PIRSF PIRSF006118 1 172 7.5E-69 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SCD_RS02785 76de5282dbae1ae701a2d3c150f49853 173 Pfam PF08282 haloacid dehalogenase-like hydrolase 79 142 1.5E-6 T 22-04-2016 IPR023214 HAD-like domain SCD_RS02785 76de5282dbae1ae701a2d3c150f49853 173 Gene3D G3DSA:3.40.50.1000 2 164 1.5E-43 T 22-04-2016 IPR023214 HAD-like domain SCD_RS04620 97e1edd7044e692858a7e9c7cdef7ddb 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 307 2.8E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SCD_RS04620 97e1edd7044e692858a7e9c7cdef7ddb 319 Gene3D G3DSA:1.10.3720.10 26 315 8.4E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SCD_RS04620 97e1edd7044e692858a7e9c7cdef7ddb 319 SUPERFAMILY SSF161098 26 303 4.25E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SCD_RS04620 97e1edd7044e692858a7e9c7cdef7ddb 319 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 22 310 2.3E-92 T 22-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 SCD_RS04620 97e1edd7044e692858a7e9c7cdef7ddb 319 PANTHER PTHR30425 8 318 1.8E-145 T 22-04-2016 SCD_RS04620 97e1edd7044e692858a7e9c7cdef7ddb 319 PANTHER PTHR30425:SF1 8 318 1.8E-145 T 22-04-2016 SCD_RS00520 cb66e044a9416518d332f0acc9bf1939 88 PANTHER PTHR38036:SF1 1 88 1.7E-23 T 22-04-2016 SCD_RS00520 cb66e044a9416518d332f0acc9bf1939 88 SUPERFAMILY SSF117991 3 88 2.62E-26 T 22-04-2016 IPR027471 YbeD-like domain SCD_RS00520 cb66e044a9416518d332f0acc9bf1939 88 PANTHER PTHR38036 1 88 1.7E-23 T 22-04-2016 SCD_RS00520 cb66e044a9416518d332f0acc9bf1939 88 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 88 21.804 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 SCD_RS00520 cb66e044a9416518d332f0acc9bf1939 88 Pfam PF04359 Protein of unknown function (DUF493) 6 88 5.2E-32 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 SCD_RS00520 cb66e044a9416518d332f0acc9bf1939 88 Gene3D G3DSA:3.30.70.1460 2 88 9.1E-32 T 22-04-2016 IPR027471 YbeD-like domain SCD_RS05710 6acf3b353f8dc9972587003882b5d020 384 SUPERFAMILY SSF52821 42 146 8.12E-21 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS05710 6acf3b353f8dc9972587003882b5d020 384 SMART SM00450 282 378 3.9E-10 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS05710 6acf3b353f8dc9972587003882b5d020 384 SMART SM00450 152 251 3.2E-14 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS05710 6acf3b353f8dc9972587003882b5d020 384 SMART SM00450 45 148 2.2E-11 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS05710 6acf3b353f8dc9972587003882b5d020 384 Pfam PF00581 Rhodanese-like domain 285 357 1.4E-9 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS05710 6acf3b353f8dc9972587003882b5d020 384 Pfam PF00581 Rhodanese-like domain 59 144 1.1E-11 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS05710 6acf3b353f8dc9972587003882b5d020 384 Pfam PF00581 Rhodanese-like domain 154 247 8.1E-12 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS05710 6acf3b353f8dc9972587003882b5d020 384 Gene3D G3DSA:3.40.250.10 43 146 6.3E-18 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS05710 6acf3b353f8dc9972587003882b5d020 384 ProSitePatterns PS00380 Rhodanese signature 1. 74 85 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 SCD_RS05710 6acf3b353f8dc9972587003882b5d020 384 SUPERFAMILY SSF52821 147 248 2.75E-21 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS05710 6acf3b353f8dc9972587003882b5d020 384 SUPERFAMILY SSF52821 279 354 1.83E-18 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS05710 6acf3b353f8dc9972587003882b5d020 384 Gene3D G3DSA:3.40.250.10 148 254 1.2E-21 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS05710 6acf3b353f8dc9972587003882b5d020 384 Gene3D G3DSA:3.40.250.10 279 356 2.3E-18 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS04820 254990069521aab898212a3302433a9b 607 Gene3D G3DSA:3.90.10.10 39 93 1.6E-6 T 22-04-2016 SCD_RS04820 254990069521aab898212a3302433a9b 607 Gene3D G3DSA:3.90.10.10 444 516 4.9E-9 T 22-04-2016 SCD_RS04820 254990069521aab898212a3302433a9b 607 Pfam PF02085 Class III cytochrome C family 38 100 5.7E-5 T 22-04-2016 IPR020942 Class III cytochrome C GO:0009055|GO:0020037 SCD_RS04820 254990069521aab898212a3302433a9b 607 Gene3D G3DSA:1.10.3820.10 562 597 1.8E-4 T 22-04-2016 SCD_RS04820 254990069521aab898212a3302433a9b 607 SUPERFAMILY SSF48695 5 247 6.62E-22 T 22-04-2016 IPR011031 Multihaem cytochrome SCD_RS04820 254990069521aab898212a3302433a9b 607 SUPERFAMILY SSF48695 238 351 7.85E-7 T 22-04-2016 IPR011031 Multihaem cytochrome SCD_RS04820 254990069521aab898212a3302433a9b 607 Gene3D G3DSA:3.90.10.10 517 561 4.5E-6 T 22-04-2016 SCD_RS04820 254990069521aab898212a3302433a9b 607 Gene3D G3DSA:3.90.10.10 292 365 1.5E-7 T 22-04-2016 SCD_RS04820 254990069521aab898212a3302433a9b 607 Gene3D G3DSA:3.90.10.10 221 291 1.8E-7 T 22-04-2016 SCD_RS04820 254990069521aab898212a3302433a9b 607 Gene3D G3DSA:1.10.1130.10 366 443 5.7E-8 T 22-04-2016 IPR012286 Tetrahaem cytochrome domain SCD_RS04820 254990069521aab898212a3302433a9b 607 Gene3D G3DSA:1.10.1130.10 94 151 8.8E-5 T 22-04-2016 IPR012286 Tetrahaem cytochrome domain SCD_RS04820 254990069521aab898212a3302433a9b 607 Gene3D G3DSA:1.10.1130.10 152 220 2.4E-8 T 22-04-2016 IPR012286 Tetrahaem cytochrome domain SCD_RS04820 254990069521aab898212a3302433a9b 607 SUPERFAMILY SSF48695 326 600 2.05E-22 T 22-04-2016 IPR011031 Multihaem cytochrome SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 Gene3D G3DSA:3.30.450.20 357 478 1.5E-24 T 22-04-2016 SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 SMART SM00267 603 775 5.7E-67 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 Pfam PF00990 Diguanylate cyclase, GGDEF domain 614 771 1.7E-52 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 Gene3D G3DSA:3.30.450.20 479 596 1.9E-29 T 22-04-2016 SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 SUPERFAMILY SSF52172 1052 1205 1.25E-30 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 Gene3D G3DSA:3.30.70.270 616 782 2.8E-60 T 22-04-2016 SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 SUPERFAMILY SSF55073 619 776 6.83E-52 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 SMART SM00448 1053 1165 7.4E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 Pfam PF00072 Response regulator receiver domain 1056 1165 1.1E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 Pfam PF13188 PAS domain 1221 1258 0.086 T 22-04-2016 IPR000014 PAS domain SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 SUPERFAMILY SSF141868 790 1039 8.11E-97 T 22-04-2016 IPR001633 EAL domain SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 PANTHER PTHR10799:SF774 1261 1280 5.5E-96 T 22-04-2016 SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 PANTHER PTHR10799:SF774 500 865 5.5E-96 T 22-04-2016 SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 SUPERFAMILY SSF55785 372 489 6.81E-24 T 22-04-2016 IPR000014 PAS domain SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 Gene3D G3DSA:3.40.50.2300 1054 1185 5.0E-29 T 22-04-2016 SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 Gene3D G3DSA:3.20.20.450 788 1038 2.6E-105 T 22-04-2016 IPR001633 EAL domain SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 610 774 4.4E-48 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 Pfam PF13426 PAS domain 373 480 2.0E-11 T 22-04-2016 IPR000014 PAS domain SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 Pfam PF13426 PAS domain 500 602 5.4E-16 T 22-04-2016 IPR000014 PAS domain SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 SMART SM00086 441 481 0.43 T 22-04-2016 IPR001610 PAC motif SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 SMART SM00086 561 603 1.9E-5 T 22-04-2016 IPR001610 PAC motif SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 SMART SM00052 785 1031 4.8E-134 T 22-04-2016 IPR001633 EAL domain SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 SUPERFAMILY SSF55785 1221 1273 1.92E-5 T 22-04-2016 IPR000014 PAS domain SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 Gene3D G3DSA:3.30.450.20 1220 1261 7.4E-6 T 22-04-2016 SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 PANTHER PTHR10799 1261 1280 5.5E-96 T 22-04-2016 SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 PANTHER PTHR10799 500 865 5.5E-96 T 22-04-2016 SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 SMART SM00091 568 637 240.0 T 22-04-2016 IPR000014 PAS domain SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 SMART SM00091 489 555 3.0E-7 T 22-04-2016 IPR000014 PAS domain SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 SMART SM00091 1218 1283 0.24 T 22-04-2016 IPR000014 PAS domain SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 SMART SM00091 361 428 1.3E-7 T 22-04-2016 IPR000014 PAS domain SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 Pfam PF00563 EAL domain 793 1026 1.6E-75 T 22-04-2016 IPR001633 EAL domain SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 358 488 4.1E-20 T 22-04-2016 IPR000014 PAS domain SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 493 610 2.4E-19 T 22-04-2016 IPR000014 PAS domain SCD_RS15825 d05dbf389c6695d0c0a7eb01e05377b7 1318 SUPERFAMILY SSF55785 499 600 4.89E-27 T 22-04-2016 IPR000014 PAS domain SCD_RS10080 accd14e9b799895b60c16363c616f41f 391 PANTHER PTHR30304 1 289 2.7E-65 T 22-04-2016 SCD_RS10080 accd14e9b799895b60c16363c616f41f 391 SUPERFAMILY SSF51569 2 283 3.66E-79 T 22-04-2016 SCD_RS10080 accd14e9b799895b60c16363c616f41f 391 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 282 6.1E-84 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SCD_RS10080 accd14e9b799895b60c16363c616f41f 391 Gene3D G3DSA:3.30.70.900 296 389 9.0E-10 T 22-04-2016 SCD_RS10080 accd14e9b799895b60c16363c616f41f 391 Gene3D G3DSA:3.20.20.70 1 283 1.6E-88 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS10080 accd14e9b799895b60c16363c616f41f 391 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 2 282 8.7E-65 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SCD_RS10080 accd14e9b799895b60c16363c616f41f 391 SUPERFAMILY SSF54909 296 389 5.54E-6 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel SCD_RS11655 5f1cb5cb920dc75c8d8e9f0d33abf1c7 349 Gene3D G3DSA:3.90.650.10 176 346 1.1E-69 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SCD_RS11655 5f1cb5cb920dc75c8d8e9f0d33abf1c7 349 SUPERFAMILY SSF56042 175 344 2.09E-62 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SCD_RS11655 5f1cb5cb920dc75c8d8e9f0d33abf1c7 349 Gene3D G3DSA:3.30.1330.10 26 174 2.4E-64 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SCD_RS11655 5f1cb5cb920dc75c8d8e9f0d33abf1c7 349 Pfam PF02769 AIR synthase related protein, C-terminal domain 181 342 1.3E-36 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SCD_RS11655 5f1cb5cb920dc75c8d8e9f0d33abf1c7 349 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 11 338 4.0E-142 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SCD_RS11655 5f1cb5cb920dc75c8d8e9f0d33abf1c7 349 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 11 348 47.644 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SCD_RS11655 5f1cb5cb920dc75c8d8e9f0d33abf1c7 349 SUPERFAMILY SSF55326 11 174 7.48E-54 T 22-04-2016 SCD_RS11655 5f1cb5cb920dc75c8d8e9f0d33abf1c7 349 Pfam PF00586 AIR synthase related protein, N-terminal domain 78 166 4.2E-16 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SCD_RS11655 5f1cb5cb920dc75c8d8e9f0d33abf1c7 349 PANTHER PTHR10520 8 348 1.4E-218 T 22-04-2016 SCD_RS04755 2e45493d38831b01b3862125895a019a 549 Gene3D G3DSA:3.40.50.150 267 449 5.3E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS04755 2e45493d38831b01b3862125895a019a 549 Gene3D G3DSA:3.40.50.150 190 230 5.3E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS04755 2e45493d38831b01b3862125895a019a 549 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 211 225 7.8E-18 T 22-04-2016 SCD_RS04755 2e45493d38831b01b3862125895a019a 549 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 351 375 7.8E-18 T 22-04-2016 SCD_RS04755 2e45493d38831b01b3862125895a019a 549 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 187 203 7.8E-18 T 22-04-2016 SCD_RS04755 2e45493d38831b01b3862125895a019a 549 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 322 334 7.8E-18 T 22-04-2016 SCD_RS04755 2e45493d38831b01b3862125895a019a 549 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 325 331 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SCD_RS04755 2e45493d38831b01b3862125895a019a 549 PANTHER PTHR30195 3 547 1.7E-73 T 22-04-2016 SCD_RS04755 2e45493d38831b01b3862125895a019a 549 Pfam PF02384 N-6 DNA Methylase 166 509 1.4E-53 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 SCD_RS04755 2e45493d38831b01b3862125895a019a 549 SUPERFAMILY SSF53335 89 546 5.15E-101 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS04755 2e45493d38831b01b3862125895a019a 549 SUPERFAMILY SSF53335 8 46 5.15E-101 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS04755 2e45493d38831b01b3862125895a019a 549 PANTHER PTHR30195:SF12 3 547 1.7E-73 T 22-04-2016 SCD_RS09265 44240ebeb31cebf33e97de800e8d75f2 91 ProSitePatterns PS00151 Acylphosphatase signature 2. 33 49 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SCD_RS09265 44240ebeb31cebf33e97de800e8d75f2 91 PANTHER PTHR10029 1 88 8.5E-33 T 22-04-2016 SCD_RS09265 44240ebeb31cebf33e97de800e8d75f2 91 Pfam PF00708 Acylphosphatase 1 86 4.5E-24 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SCD_RS09265 44240ebeb31cebf33e97de800e8d75f2 91 SUPERFAMILY SSF54975 3 86 2.18E-26 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SCD_RS09265 44240ebeb31cebf33e97de800e8d75f2 91 ProSitePatterns PS00150 Acylphosphatase signature 1. 9 19 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SCD_RS09265 44240ebeb31cebf33e97de800e8d75f2 91 Gene3D G3DSA:3.30.70.100 4 86 2.4E-28 T 22-04-2016 SCD_RS09265 44240ebeb31cebf33e97de800e8d75f2 91 PRINTS PR00112 Acylphosphatase signature 25 50 8.0E-10 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SCD_RS09265 44240ebeb31cebf33e97de800e8d75f2 91 PRINTS PR00112 Acylphosphatase signature 4 19 8.0E-10 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SCD_RS08270 d0ffec2cf5ec8395218ec286741bf34f 139 Pfam PF14489 QueF-like protein 40 118 1.3E-32 T 22-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SCD_RS08270 d0ffec2cf5ec8395218ec286741bf34f 139 Gene3D G3DSA:3.30.1130.10 4 123 1.4E-46 T 22-04-2016 SCD_RS08270 d0ffec2cf5ec8395218ec286741bf34f 139 SUPERFAMILY SSF55620 5 112 4.74E-25 T 22-04-2016 SCD_RS08270 d0ffec2cf5ec8395218ec286741bf34f 139 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 139 51.731 T 22-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SCD_RS08270 d0ffec2cf5ec8395218ec286741bf34f 139 PANTHER PTHR34354 9 129 5.8E-51 T 22-04-2016 SCD_RS08270 d0ffec2cf5ec8395218ec286741bf34f 139 PIRSF PIRSF027377 1 125 1.8E-54 T 22-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SCD_RS08270 d0ffec2cf5ec8395218ec286741bf34f 139 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 7 117 6.5E-53 T 22-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SCD_RS08270 d0ffec2cf5ec8395218ec286741bf34f 139 PANTHER PTHR34354:SF1 9 129 5.8E-51 T 22-04-2016 SCD_RS00275 eea9cb8413bf980427c0ebdbbf8d7f06 167 PANTHER PTHR38098:SF1 1 164 1.7E-19 T 22-04-2016 SCD_RS00275 eea9cb8413bf980427c0ebdbbf8d7f06 167 PANTHER PTHR38098 1 164 1.7E-19 T 22-04-2016 SCD_RS00275 eea9cb8413bf980427c0ebdbbf8d7f06 167 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 160 23.728 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 SCD_RS00275 eea9cb8413bf980427c0ebdbbf8d7f06 167 Gene3D G3DSA:3.30.160.150 17 162 3.8E-40 T 22-04-2016 SCD_RS00275 eea9cb8413bf980427c0ebdbbf8d7f06 167 Pfam PF04390 Lipopolysaccharide-assembly 9 155 1.6E-15 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 SCD_RS14030 3645b8958a25c8ee60ac6c762f7368d8 612 Gene3D G3DSA:3.10.580.10 327 425 3.9E-9 T 22-04-2016 SCD_RS14030 3645b8958a25c8ee60ac6c762f7368d8 612 Pfam PF00563 EAL domain 32 261 1.6E-48 T 22-04-2016 IPR001633 EAL domain SCD_RS14030 3645b8958a25c8ee60ac6c762f7368d8 612 SMART SM00267 419 606 5.0E-9 T 22-04-2016 IPR000160 GGDEF domain SCD_RS14030 3645b8958a25c8ee60ac6c762f7368d8 612 SMART SM00052 24 268 2.1E-34 T 22-04-2016 IPR001633 EAL domain SCD_RS14030 3645b8958a25c8ee60ac6c762f7368d8 612 SUPERFAMILY SSF54631 307 425 3.48E-11 T 22-04-2016 SCD_RS14030 3645b8958a25c8ee60ac6c762f7368d8 612 PANTHER PTHR33121 22 261 3.3E-47 T 22-04-2016 SCD_RS14030 3645b8958a25c8ee60ac6c762f7368d8 612 PANTHER PTHR33121:SF10 22 261 3.3E-47 T 22-04-2016 SCD_RS14030 3645b8958a25c8ee60ac6c762f7368d8 612 SUPERFAMILY SSF141868 32 261 2.35E-61 T 22-04-2016 IPR001633 EAL domain SCD_RS14030 3645b8958a25c8ee60ac6c762f7368d8 612 Gene3D G3DSA:3.20.20.450 32 262 2.0E-54 T 22-04-2016 IPR001633 EAL domain SCD_RS14030 3645b8958a25c8ee60ac6c762f7368d8 612 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 444 535 5.0E-14 T 22-04-2016 IPR000160 GGDEF domain SCD_RS14030 3645b8958a25c8ee60ac6c762f7368d8 612 Gene3D G3DSA:3.30.70.270 434 603 2.5E-24 T 22-04-2016 SCD_RS14030 3645b8958a25c8ee60ac6c762f7368d8 612 Pfam PF00990 Diguanylate cyclase, GGDEF domain 435 535 4.7E-14 T 22-04-2016 IPR000160 GGDEF domain SCD_RS14030 3645b8958a25c8ee60ac6c762f7368d8 612 SUPERFAMILY SSF55073 436 604 2.04E-22 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS04395 608716a57c9a5be249580b5d7cdbdb32 267 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 259 2.2E-74 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SCD_RS04395 608716a57c9a5be249580b5d7cdbdb32 267 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 262 33.761 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SCD_RS04395 608716a57c9a5be249580b5d7cdbdb32 267 PANTHER PTHR10314:SF4 74 256 3.0E-21 T 22-04-2016 SCD_RS04395 608716a57c9a5be249580b5d7cdbdb32 267 PANTHER PTHR10314:SF4 1 51 3.0E-21 T 22-04-2016 SCD_RS04395 608716a57c9a5be249580b5d7cdbdb32 267 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SCD_RS04395 608716a57c9a5be249580b5d7cdbdb32 267 Gene3D G3DSA:3.20.20.70 1 263 5.7E-98 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS04395 608716a57c9a5be249580b5d7cdbdb32 267 SUPERFAMILY SSF51366 1 249 4.8E-89 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SCD_RS04395 608716a57c9a5be249580b5d7cdbdb32 267 PANTHER PTHR10314 74 256 3.0E-21 T 22-04-2016 SCD_RS04395 608716a57c9a5be249580b5d7cdbdb32 267 PANTHER PTHR10314 1 51 3.0E-21 T 22-04-2016 SCD_RS04395 608716a57c9a5be249580b5d7cdbdb32 267 Pfam PF00290 Tryptophan synthase alpha chain 8 261 2.3E-85 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SCD_RS13865 c949142c3c6faab3d41a6410788554c4 466 Pfam PF14698 Argininosuccinate lyase C-terminal 371 438 5.2E-24 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SCD_RS13865 c949142c3c6faab3d41a6410788554c4 466 SUPERFAMILY SSF48557 14 464 3.93E-154 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 SCD_RS13865 c949142c3c6faab3d41a6410788554c4 466 Pfam PF00206 Lyase 14 308 2.3E-78 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal SCD_RS13865 c949142c3c6faab3d41a6410788554c4 466 ProSitePatterns PS00163 Fumarate lyases signature. 283 292 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SCD_RS13865 c949142c3c6faab3d41a6410788554c4 466 TIGRFAM TIGR00838 argH: argininosuccinate lyase 11 461 6.4E-188 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SCD_RS13865 c949142c3c6faab3d41a6410788554c4 466 PRINTS PR00149 Fumarate lyase superfamily signature 239 266 2.7E-31 T 22-04-2016 IPR000362 Fumarate lyase family SCD_RS13865 c949142c3c6faab3d41a6410788554c4 466 PRINTS PR00149 Fumarate lyase superfamily signature 110 128 2.7E-31 T 22-04-2016 IPR000362 Fumarate lyase family SCD_RS13865 c949142c3c6faab3d41a6410788554c4 466 PRINTS PR00149 Fumarate lyase superfamily signature 283 299 2.7E-31 T 22-04-2016 IPR000362 Fumarate lyase family SCD_RS13865 c949142c3c6faab3d41a6410788554c4 466 PRINTS PR00149 Fumarate lyase superfamily signature 155 173 2.7E-31 T 22-04-2016 IPR000362 Fumarate lyase family SCD_RS13865 c949142c3c6faab3d41a6410788554c4 466 PANTHER PTHR11444:SF3 1 463 2.8E-232 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SCD_RS13865 c949142c3c6faab3d41a6410788554c4 466 Gene3D G3DSA:1.10.40.30 382 439 1.4E-30 T 22-04-2016 SCD_RS13865 c949142c3c6faab3d41a6410788554c4 466 PANTHER PTHR11444 1 463 2.8E-232 T 22-04-2016 IPR000362 Fumarate lyase family SCD_RS13865 c949142c3c6faab3d41a6410788554c4 466 Gene3D G3DSA:1.10.275.10 10 114 4.0E-39 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal SCD_RS13865 c949142c3c6faab3d41a6410788554c4 466 Hamap MF_00006 Argininosuccinate lyase [argH]. 10 461 43.775 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SCD_RS13865 c949142c3c6faab3d41a6410788554c4 466 Gene3D G3DSA:1.20.200.10 115 381 1.7E-113 T 22-04-2016 SCD_RS13865 c949142c3c6faab3d41a6410788554c4 466 PRINTS PR00145 Argininosuccinate lyase family signature 201 217 2.4E-68 T 22-04-2016 SCD_RS13865 c949142c3c6faab3d41a6410788554c4 466 PRINTS PR00145 Argininosuccinate lyase family signature 239 263 2.4E-68 T 22-04-2016 SCD_RS13865 c949142c3c6faab3d41a6410788554c4 466 PRINTS PR00145 Argininosuccinate lyase family signature 150 170 2.4E-68 T 22-04-2016 SCD_RS13865 c949142c3c6faab3d41a6410788554c4 466 PRINTS PR00145 Argininosuccinate lyase family signature 283 299 2.4E-68 T 22-04-2016 SCD_RS13865 c949142c3c6faab3d41a6410788554c4 466 PRINTS PR00145 Argininosuccinate lyase family signature 318 337 2.4E-68 T 22-04-2016 SCD_RS13865 c949142c3c6faab3d41a6410788554c4 466 PRINTS PR00145 Argininosuccinate lyase family signature 109 131 2.4E-68 T 22-04-2016 SCD_RS08750 0efe72df3504ee1733819fea036355cc 623 SUPERFAMILY SSF54534 223 356 1.44E-33 T 22-04-2016 SCD_RS08750 0efe72df3504ee1733819fea036355cc 623 Pfam PF13616 PPIC-type PPIASE domain 252 357 2.2E-28 T 22-04-2016 SCD_RS08750 0efe72df3504ee1733819fea036355cc 623 SUPERFAMILY SSF109998 43 167 3.92E-29 T 22-04-2016 IPR027304 Trigger factor/SurA domain SCD_RS08750 0efe72df3504ee1733819fea036355cc 623 SUPERFAMILY SSF109998 202 243 3.92E-29 T 22-04-2016 IPR027304 Trigger factor/SurA domain SCD_RS08750 0efe72df3504ee1733819fea036355cc 623 Pfam PF13624 SurA N-terminal domain 1 164 4.2E-51 T 22-04-2016 SCD_RS08750 0efe72df3504ee1733819fea036355cc 623 Gene3D G3DSA:3.10.50.40 259 382 2.8E-43 T 22-04-2016 SCD_RS08750 0efe72df3504ee1733819fea036355cc 623 PANTHER PTHR10657 1 166 8.1E-88 T 22-04-2016 SCD_RS08750 0efe72df3504ee1733819fea036355cc 623 PANTHER PTHR10657 241 523 8.1E-88 T 22-04-2016 SCD_RS08750 0efe72df3504ee1733819fea036355cc 623 PANTHER PTHR10657:SF11 1 166 8.1E-88 T 22-04-2016 SCD_RS08750 0efe72df3504ee1733819fea036355cc 623 PANTHER PTHR10657:SF11 241 523 8.1E-88 T 22-04-2016 SCD_RS08750 0efe72df3504ee1733819fea036355cc 623 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 296 317 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site SCD_RS01320 8d82ce024f1ee64500b9d48ee7f39ef7 83 Pfam PF04380 Membrane fusogenic activity 2 76 1.4E-28 T 22-04-2016 IPR007475 Membrane fusogenic activity SCD_RS01320 8d82ce024f1ee64500b9d48ee7f39ef7 83 PANTHER PTHR38040:SF1 24 83 2.3E-22 T 22-04-2016 SCD_RS01320 8d82ce024f1ee64500b9d48ee7f39ef7 83 PANTHER PTHR38040 24 83 2.3E-22 T 22-04-2016 SCD_RS11410 dfa66e9d9b5d42c962c8926b10c660a9 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 218 8.7E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SCD_RS11410 dfa66e9d9b5d42c962c8926b10c660a9 227 SMART SM00862 145 218 5.0E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SCD_RS11410 dfa66e9d9b5d42c962c8926b10c660a9 227 PANTHER PTHR26402:SF518 1 221 1.8E-84 T 22-04-2016 SCD_RS11410 dfa66e9d9b5d42c962c8926b10c660a9 227 Gene3D G3DSA:3.40.50.2300 1 120 5.5E-40 T 22-04-2016 SCD_RS11410 dfa66e9d9b5d42c962c8926b10c660a9 227 SUPERFAMILY SSF52172 1 174 1.85E-39 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS11410 dfa66e9d9b5d42c962c8926b10c660a9 227 Pfam PF00072 Response regulator receiver domain 3 113 1.5E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS11410 dfa66e9d9b5d42c962c8926b10c660a9 227 SMART SM00448 1 112 7.8E-41 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS11410 dfa66e9d9b5d42c962c8926b10c660a9 227 PANTHER PTHR26402 1 221 1.8E-84 T 22-04-2016 SCD_RS11410 dfa66e9d9b5d42c962c8926b10c660a9 227 Gene3D G3DSA:1.10.10.10 124 221 1.1E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS07745 a51adabced4d0b30a62adc1efd3cf053 400 SUPERFAMILY SSF109604 179 397 1.38E-32 T 22-04-2016 SCD_RS07745 a51adabced4d0b30a62adc1efd3cf053 400 SUPERFAMILY SSF141868 4 187 8.11E-14 T 22-04-2016 IPR001633 EAL domain SCD_RS07745 a51adabced4d0b30a62adc1efd3cf053 400 Gene3D G3DSA:3.20.20.450 85 178 8.6E-7 T 22-04-2016 IPR001633 EAL domain SCD_RS07745 a51adabced4d0b30a62adc1efd3cf053 400 Pfam PF00563 EAL domain 26 185 7.3E-11 T 22-04-2016 IPR001633 EAL domain SCD_RS07745 a51adabced4d0b30a62adc1efd3cf053 400 Gene3D G3DSA:1.10.3150.10 179 396 6.0E-25 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS07745 a51adabced4d0b30a62adc1efd3cf053 400 PANTHER PTHR33525 1 324 1.3E-41 T 22-04-2016 SCD_RS07745 a51adabced4d0b30a62adc1efd3cf053 400 PIRSF PIRSF003180 1 400 4.5E-77 T 22-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing SCD_RS07745 a51adabced4d0b30a62adc1efd3cf053 400 PANTHER PTHR33525:SF4 1 324 1.3E-41 T 22-04-2016 SCD_RS07745 a51adabced4d0b30a62adc1efd3cf053 400 Pfam PF08668 HDOD domain 211 317 7.3E-7 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS13415 e8c4eafeaac92c12f0439b2c21b7357d 249 Gene3D G3DSA:1.20.950.20 5 222 9.0E-38 T 22-04-2016 SCD_RS13415 e8c4eafeaac92c12f0439b2c21b7357d 249 Pfam PF02665 Nitrate reductase gamma subunit 66 212 9.9E-12 T 22-04-2016 IPR023234 NarG-like domain SCD_RS13415 e8c4eafeaac92c12f0439b2c21b7357d 249 SUPERFAMILY SSF103501 6 233 2.88E-44 T 22-04-2016 IPR023234 NarG-like domain SCD_RS14695 16c85eeb7637ef72e1bb9df6730f5624 309 SUPERFAMILY SSF53448 3 231 4.64E-56 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS14695 16c85eeb7637ef72e1bb9df6730f5624 309 PANTHER PTHR22916 159 228 2.5E-51 T 22-04-2016 SCD_RS14695 16c85eeb7637ef72e1bb9df6730f5624 309 PANTHER PTHR22916 1 141 2.5E-51 T 22-04-2016 SCD_RS14695 16c85eeb7637ef72e1bb9df6730f5624 309 Pfam PF00535 Glycosyl transferase family 2 6 110 2.0E-34 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SCD_RS14695 16c85eeb7637ef72e1bb9df6730f5624 309 Gene3D G3DSA:3.90.550.10 3 243 2.9E-52 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS14675 8f10133ac933dda1d2e3fef17dd19d4f 273 Gene3D G3DSA:3.40.50.170 91 233 2.3E-25 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS14675 8f10133ac933dda1d2e3fef17dd19d4f 273 Pfam PF00551 Formyl transferase 99 208 8.8E-16 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS14675 8f10133ac933dda1d2e3fef17dd19d4f 273 SUPERFAMILY SSF53328 92 232 3.66E-27 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS07360 5625b46b9b2b78013e10cf8c763363a6 378 PANTHER PTHR11014:SF106 6 378 6.9E-87 T 22-04-2016 SCD_RS07360 5625b46b9b2b78013e10cf8c763363a6 378 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 1.3E-168 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 SCD_RS07360 5625b46b9b2b78013e10cf8c763363a6 378 SUPERFAMILY SSF55031 180 289 5.98E-31 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SCD_RS07360 5625b46b9b2b78013e10cf8c763363a6 378 SUPERFAMILY SSF53187 5 179 1.63E-64 T 22-04-2016 SCD_RS07360 5625b46b9b2b78013e10cf8c763363a6 378 SUPERFAMILY SSF53187 293 374 1.63E-64 T 22-04-2016 SCD_RS07360 5625b46b9b2b78013e10cf8c763363a6 378 Pfam PF07687 Peptidase dimerisation domain 176 283 2.1E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SCD_RS07360 5625b46b9b2b78013e10cf8c763363a6 378 Gene3D G3DSA:3.30.70.360 189 289 5.9E-37 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SCD_RS07360 5625b46b9b2b78013e10cf8c763363a6 378 Gene3D G3DSA:3.40.630.10 317 374 1.6E-73 T 22-04-2016 SCD_RS07360 5625b46b9b2b78013e10cf8c763363a6 378 Gene3D G3DSA:3.40.630.10 5 188 1.6E-73 T 22-04-2016 SCD_RS07360 5625b46b9b2b78013e10cf8c763363a6 378 Pfam PF01546 Peptidase family M20/M25/M40 63 372 1.6E-44 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SCD_RS07360 5625b46b9b2b78013e10cf8c763363a6 378 PANTHER PTHR11014 6 378 6.9E-87 T 22-04-2016 SCD_RS07360 5625b46b9b2b78013e10cf8c763363a6 378 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 376 52.175 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 SCD_RS08980 d33ff41f19af045970bf68a0ddd0b0a9 89 Gene3D G3DSA:3.30.70.1070 19 86 2.3E-15 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SCD_RS08980 d33ff41f19af045970bf68a0ddd0b0a9 89 Pfam PF05036 Sporulation related domain 21 87 1.5E-13 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SCD_RS08980 d33ff41f19af045970bf68a0ddd0b0a9 89 SUPERFAMILY SSF110997 22 87 2.75E-15 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SCD_RS14650 8f4703bce1ecd58fda8b8eea0987cf93 631 Gene3D G3DSA:3.60.20.10 1 224 5.7E-79 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SCD_RS14650 8f4703bce1ecd58fda8b8eea0987cf93 631 PANTHER PTHR11772:SF10 473 624 9.8E-169 T 22-04-2016 SCD_RS14650 8f4703bce1ecd58fda8b8eea0987cf93 631 PANTHER PTHR11772:SF10 2 384 9.8E-169 T 22-04-2016 SCD_RS14650 8f4703bce1ecd58fda8b8eea0987cf93 631 SUPERFAMILY SSF56235 1 226 1.8E-68 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SCD_RS14650 8f4703bce1ecd58fda8b8eea0987cf93 631 Pfam PF13537 Glutamine amidotransferase domain 48 168 7.9E-51 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SCD_RS14650 8f4703bce1ecd58fda8b8eea0987cf93 631 PANTHER PTHR11772 473 624 9.8E-169 T 22-04-2016 SCD_RS14650 8f4703bce1ecd58fda8b8eea0987cf93 631 PANTHER PTHR11772 2 384 9.8E-169 T 22-04-2016 SCD_RS14650 8f4703bce1ecd58fda8b8eea0987cf93 631 Gene3D G3DSA:3.40.50.620 477 626 2.1E-86 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS14650 8f4703bce1ecd58fda8b8eea0987cf93 631 Gene3D G3DSA:3.40.50.620 225 401 2.1E-86 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS14650 8f4703bce1ecd58fda8b8eea0987cf93 631 SUPERFAMILY SSF52402 231 382 6.28E-86 T 22-04-2016 SCD_RS14650 8f4703bce1ecd58fda8b8eea0987cf93 631 SUPERFAMILY SSF52402 481 621 6.28E-86 T 22-04-2016 SCD_RS14650 8f4703bce1ecd58fda8b8eea0987cf93 631 TIGRFAM TIGR03108 eps_aminotran_1: exosortase A system-associated amidotransferase 1 1 627 0.0 T 22-04-2016 IPR017539 Exosortase 1 system-associated amidotransferase 1 SCD_RS14650 8f4703bce1ecd58fda8b8eea0987cf93 631 PIRSF PIRSF001589 1 629 1.1E-179 T 22-04-2016 SCD_RS14650 8f4703bce1ecd58fda8b8eea0987cf93 631 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 561 6.1E-154 T 22-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 SCD_RS14650 8f4703bce1ecd58fda8b8eea0987cf93 631 Pfam PF00733 Asparagine synthase 243 625 2.4E-98 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 SCD_RS07140 4571bcf3f8134deb8f538e73ce522975 318 PANTHER PTHR24220 8 228 8.5E-104 T 22-04-2016 SCD_RS07140 4571bcf3f8134deb8f538e73ce522975 318 PANTHER PTHR24220 294 314 8.5E-104 T 22-04-2016 SCD_RS07140 4571bcf3f8134deb8f538e73ce522975 318 Pfam PF00005 ABC transporter 23 166 5.6E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS07140 4571bcf3f8134deb8f538e73ce522975 318 SMART SM00382 31 221 3.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS07140 4571bcf3f8134deb8f538e73ce522975 318 PANTHER PTHR24220:SF0 8 228 8.5E-104 T 22-04-2016 SCD_RS07140 4571bcf3f8134deb8f538e73ce522975 318 PANTHER PTHR24220:SF0 294 314 8.5E-104 T 22-04-2016 SCD_RS07140 4571bcf3f8134deb8f538e73ce522975 318 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS07140 4571bcf3f8134deb8f538e73ce522975 318 Pfam PF13732 Domain of unknown function (DUF4162) 218 303 1.1E-7 T 22-04-2016 IPR025302 Domain of unknown function DUF4162 SCD_RS07140 4571bcf3f8134deb8f538e73ce522975 318 Gene3D G3DSA:3.40.50.300 4 225 4.9E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07140 4571bcf3f8134deb8f538e73ce522975 318 SUPERFAMILY SSF52540 6 224 2.89E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS01775 58a5defa933a7bd6c9fedcfad2e83ae3 240 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 33 48 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SCD_RS01775 58a5defa933a7bd6c9fedcfad2e83ae3 240 Gene3D G3DSA:3.40.50.150 22 234 9.5E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS01775 58a5defa933a7bd6c9fedcfad2e83ae3 240 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 13 238 35.471 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SCD_RS01775 58a5defa933a7bd6c9fedcfad2e83ae3 240 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 147 161 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SCD_RS01775 58a5defa933a7bd6c9fedcfad2e83ae3 240 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 22 238 4.2E-74 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SCD_RS01775 58a5defa933a7bd6c9fedcfad2e83ae3 240 Pfam PF01209 ubiE/COQ5 methyltransferase family 18 238 1.7E-69 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SCD_RS01775 58a5defa933a7bd6c9fedcfad2e83ae3 240 PANTHER PTHR10108 8 238 7.5E-99 T 22-04-2016 SCD_RS01775 58a5defa933a7bd6c9fedcfad2e83ae3 240 PANTHER PTHR10108:SF24 8 238 7.5E-99 T 22-04-2016 SCD_RS01775 58a5defa933a7bd6c9fedcfad2e83ae3 240 SUPERFAMILY SSF53335 1 230 3.72E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS09235 e09685334cc208abc4a7dd0f922cfa27 272 PANTHER PTHR15032:SF13 20 272 2.1E-56 T 22-04-2016 SCD_RS09235 e09685334cc208abc4a7dd0f922cfa27 272 PANTHER PTHR15032 20 272 2.1E-56 T 22-04-2016 SCD_RS09235 e09685334cc208abc4a7dd0f922cfa27 272 Gene3D G3DSA:3.60.15.10 20 272 1.2E-53 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS09235 e09685334cc208abc4a7dd0f922cfa27 272 SMART SM00849 31 234 5.2E-8 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS09235 e09685334cc208abc4a7dd0f922cfa27 272 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 25 272 35.752 T 22-04-2016 IPR022877 Protein of unknown funcion UPF0173 SCD_RS09235 e09685334cc208abc4a7dd0f922cfa27 272 SUPERFAMILY SSF56281 123 258 8.65E-33 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS09235 e09685334cc208abc4a7dd0f922cfa27 272 SUPERFAMILY SSF56281 27 94 8.65E-33 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS09235 e09685334cc208abc4a7dd0f922cfa27 272 Pfam PF13483 Beta-lactamase superfamily domain 26 234 3.8E-30 T 22-04-2016 SCD_RS05515 ec052593e7101c52f663cfa91dae626d 785 Gene3D G3DSA:3.30.56.10 1 38 2.0E-25 T 22-04-2016 SCD_RS05515 ec052593e7101c52f663cfa91dae626d 785 Gene3D G3DSA:3.30.56.10 154 183 2.0E-25 T 22-04-2016 SCD_RS05515 ec052593e7101c52f663cfa91dae626d 785 Pfam PF01588 Putative tRNA binding domain 45 144 7.5E-26 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 SCD_RS05515 ec052593e7101c52f663cfa91dae626d 785 Gene3D G3DSA:3.30.930.10 487 680 2.7E-56 T 22-04-2016 SCD_RS05515 ec052593e7101c52f663cfa91dae626d 785 SMART SM00873 211 384 7.7E-93 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 SCD_RS05515 ec052593e7101c52f663cfa91dae626d 785 Pfam PF03484 tRNA synthetase B5 domain 403 468 6.3E-20 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SCD_RS05515 ec052593e7101c52f663cfa91dae626d 785 SUPERFAMILY SSF56037 195 394 4.18E-72 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SCD_RS05515 ec052593e7101c52f663cfa91dae626d 785 Pfam PF03483 B3/4 domain 211 384 3.7E-68 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 SCD_RS05515 ec052593e7101c52f663cfa91dae626d 785 Gene3D G3DSA:3.30.56.20 399 472 3.9E-27 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SCD_RS05515 ec052593e7101c52f663cfa91dae626d 785 SMART SM00874 400 468 1.1E-28 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SCD_RS05515 ec052593e7101c52f663cfa91dae626d 785 Gene3D G3DSA:2.40.50.140 42 153 6.4E-44 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS05515 ec052593e7101c52f663cfa91dae626d 785 SUPERFAMILY SSF55681 464 680 8.45E-45 T 22-04-2016 SCD_RS05515 ec052593e7101c52f663cfa91dae626d 785 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 778 44.055 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SCD_RS05515 ec052593e7101c52f663cfa91dae626d 785 PANTHER PTHR10947:SF0 2 784 1.0E-280 T 22-04-2016 SCD_RS05515 ec052593e7101c52f663cfa91dae626d 785 PANTHER PTHR10947 2 784 1.0E-280 T 22-04-2016 SCD_RS05515 ec052593e7101c52f663cfa91dae626d 785 Pfam PF03147 Ferredoxin-fold anticodon binding domain 691 784 9.3E-27 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SCD_RS05515 ec052593e7101c52f663cfa91dae626d 785 Gene3D G3DSA:3.30.70.380 693 784 2.4E-27 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SCD_RS05515 ec052593e7101c52f663cfa91dae626d 785 SUPERFAMILY SSF46955 401 472 1.1E-19 T 22-04-2016 IPR009061 Putative DNA-binding domain SCD_RS05515 ec052593e7101c52f663cfa91dae626d 785 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 784 5.7E-249 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SCD_RS05515 ec052593e7101c52f663cfa91dae626d 785 SUPERFAMILY SSF54991 686 784 1.7E-27 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SCD_RS05515 ec052593e7101c52f663cfa91dae626d 785 SMART SM00896 691 784 5.0E-37 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SCD_RS05515 ec052593e7101c52f663cfa91dae626d 785 SUPERFAMILY SSF50249 37 193 6.12E-48 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS05515 ec052593e7101c52f663cfa91dae626d 785 Gene3D G3DSA:3.50.40.10 197 391 2.2E-80 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SCD_RS01070 11c1f09ea6fe2bcc12822e8532d42912 443 Gene3D G3DSA:3.40.1190.10 92 306 3.7E-85 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS01070 11c1f09ea6fe2bcc12822e8532d42912 443 SUPERFAMILY SSF51984 1 90 1.31E-20 T 22-04-2016 SCD_RS01070 11c1f09ea6fe2bcc12822e8532d42912 443 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 442 58.797 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 SCD_RS01070 11c1f09ea6fe2bcc12822e8532d42912 443 Pfam PF01225 Mur ligase family, catalytic domain 2 99 9.6E-19 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS01070 11c1f09ea6fe2bcc12822e8532d42912 443 Gene3D G3DSA:3.90.190.20 307 441 1.8E-33 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SCD_RS01070 11c1f09ea6fe2bcc12822e8532d42912 443 Pfam PF08245 Mur ligase middle domain 108 285 2.7E-21 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS01070 11c1f09ea6fe2bcc12822e8532d42912 443 Gene3D G3DSA:3.40.50.720 1 90 2.5E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS01070 11c1f09ea6fe2bcc12822e8532d42912 443 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 441 2.0E-217 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 SCD_RS01070 11c1f09ea6fe2bcc12822e8532d42912 443 SUPERFAMILY SSF53623 95 302 4.97E-52 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS01070 11c1f09ea6fe2bcc12822e8532d42912 443 PANTHER PTHR23135 1 432 8.8E-241 T 22-04-2016 SCD_RS01070 11c1f09ea6fe2bcc12822e8532d42912 443 Pfam PF02875 Mur ligase family, glutamate ligase domain 305 355 2.7E-9 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SCD_RS01070 11c1f09ea6fe2bcc12822e8532d42912 443 SUPERFAMILY SSF53244 305 441 7.2E-38 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SCD_RS01070 11c1f09ea6fe2bcc12822e8532d42912 443 PANTHER PTHR23135:SF17 1 432 8.8E-241 T 22-04-2016 SCD_RS10885 f1dc62936ac8efd5bc786d2b9a781276 536 SMART SM00382 42 196 1.0E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS10885 f1dc62936ac8efd5bc786d2b9a781276 536 Gene3D G3DSA:3.40.50.300 26 184 3.8E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS10885 f1dc62936ac8efd5bc786d2b9a781276 536 Gene3D G3DSA:3.90.70.10 359 445 1.0E-6 T 22-04-2016 SCD_RS10885 f1dc62936ac8efd5bc786d2b9a781276 536 PANTHER PTHR35894 2 536 5.9E-131 T 22-04-2016 SCD_RS10885 f1dc62936ac8efd5bc786d2b9a781276 536 SUPERFAMILY SSF47090 449 518 6.8E-13 T 22-04-2016 IPR002477 Peptidoglycan binding-like SCD_RS10885 f1dc62936ac8efd5bc786d2b9a781276 536 SUPERFAMILY SSF52540 6 264 6.19E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS10885 f1dc62936ac8efd5bc786d2b9a781276 536 PANTHER PTHR35894:SF2 2 536 5.9E-131 T 22-04-2016 SCD_RS10885 f1dc62936ac8efd5bc786d2b9a781276 536 Pfam PF13401 AAA domain 42 172 2.5E-21 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS10885 f1dc62936ac8efd5bc786d2b9a781276 536 Gene3D G3DSA:1.10.101.10 450 523 1.3E-15 T 22-04-2016 IPR002477 Peptidoglycan binding-like SCD_RS10885 f1dc62936ac8efd5bc786d2b9a781276 536 Pfam PF01471 Putative peptidoglycan binding domain 461 516 1.2E-9 T 22-04-2016 IPR002477 Peptidoglycan binding-like SCD_RS11045 a1b18e95d0543b5838ece038f004c030 178 SMART SM00903 13 165 1.9E-19 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 SCD_RS11045 a1b18e95d0543b5838ece038f004c030 178 PANTHER PTHR30466:SF6 15 171 5.8E-45 T 22-04-2016 SCD_RS11045 a1b18e95d0543b5838ece038f004c030 178 PANTHER PTHR30466 15 171 5.8E-45 T 22-04-2016 SCD_RS11045 a1b18e95d0543b5838ece038f004c030 178 Gene3D G3DSA:2.30.110.10 4 173 1.5E-50 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SCD_RS11045 a1b18e95d0543b5838ece038f004c030 178 SUPERFAMILY SSF50475 4 172 3.39E-44 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SCD_RS11045 a1b18e95d0543b5838ece038f004c030 178 Pfam PF01613 Flavin reductase like domain 17 151 8.0E-26 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 SCD_RS12905 185d4e4cc15895862a986fd2b439528e 425 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 305 328 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 SCD_RS12905 185d4e4cc15895862a986fd2b439528e 425 SUPERFAMILY SSF118215 3 409 7.19E-116 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SCD_RS12905 185d4e4cc15895862a986fd2b439528e 425 Gene3D G3DSA:1.10.3860.10 2 413 7.5E-137 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SCD_RS12905 185d4e4cc15895862a986fd2b439528e 425 PRINTS PR00173 Glutamate-aspartate symporter signature 46 66 4.2E-68 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SCD_RS12905 185d4e4cc15895862a986fd2b439528e 425 PRINTS PR00173 Glutamate-aspartate symporter signature 5 25 4.2E-68 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SCD_RS12905 185d4e4cc15895862a986fd2b439528e 425 PRINTS PR00173 Glutamate-aspartate symporter signature 364 384 4.2E-68 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SCD_RS12905 185d4e4cc15895862a986fd2b439528e 425 PRINTS PR00173 Glutamate-aspartate symporter signature 235 254 4.2E-68 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SCD_RS12905 185d4e4cc15895862a986fd2b439528e 425 PRINTS PR00173 Glutamate-aspartate symporter signature 76 101 4.2E-68 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SCD_RS12905 185d4e4cc15895862a986fd2b439528e 425 PRINTS PR00173 Glutamate-aspartate symporter signature 337 356 4.2E-68 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SCD_RS12905 185d4e4cc15895862a986fd2b439528e 425 PRINTS PR00173 Glutamate-aspartate symporter signature 302 328 4.2E-68 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SCD_RS12905 185d4e4cc15895862a986fd2b439528e 425 PRINTS PR00173 Glutamate-aspartate symporter signature 200 219 4.2E-68 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SCD_RS12905 185d4e4cc15895862a986fd2b439528e 425 PRINTS PR00173 Glutamate-aspartate symporter signature 152 174 4.2E-68 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SCD_RS12905 185d4e4cc15895862a986fd2b439528e 425 Pfam PF00375 Sodium:dicarboxylate symporter family 3 409 7.7E-130 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SCD_RS12905 185d4e4cc15895862a986fd2b439528e 425 PANTHER PTHR11958 3 413 2.0E-153 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SCD_RS04635 92beaf502b5309d0dfc583a5edc9e0b0 348 PANTHER PTHR30570:SF0 12 340 2.3E-136 T 22-04-2016 SCD_RS04635 92beaf502b5309d0dfc583a5edc9e0b0 348 SUPERFAMILY SSF53850 28 336 9.32E-100 T 22-04-2016 SCD_RS04635 92beaf502b5309d0dfc583a5edc9e0b0 348 Pfam PF12849 PBP superfamily domain 27 309 3.2E-64 T 22-04-2016 IPR024370 PBP domain SCD_RS04635 92beaf502b5309d0dfc583a5edc9e0b0 348 PANTHER PTHR30570 12 340 2.3E-136 T 22-04-2016 SCD_RS04635 92beaf502b5309d0dfc583a5edc9e0b0 348 PIRSF PIRSF002756 2 339 9.6E-105 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 SCD_RS04635 92beaf502b5309d0dfc583a5edc9e0b0 348 Gene3D G3DSA:3.40.190.10 180 338 2.6E-30 T 22-04-2016 SCD_RS04635 92beaf502b5309d0dfc583a5edc9e0b0 348 Gene3D G3DSA:3.40.190.10 26 169 2.1E-56 T 22-04-2016 SCD_RS04635 92beaf502b5309d0dfc583a5edc9e0b0 348 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 28 336 9.0E-124 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 SCD_RS10790 748dbb6651412c3627cda61d88c34da4 93 Pfam PF00881 Nitroreductase family 24 87 2.4E-8 T 22-04-2016 IPR029479 Nitroreductase SCD_RS10790 748dbb6651412c3627cda61d88c34da4 93 Gene3D G3DSA:3.40.109.10 25 89 3.6E-12 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SCD_RS10790 748dbb6651412c3627cda61d88c34da4 93 PANTHER PTHR23026 24 87 2.8E-20 T 22-04-2016 SCD_RS10790 748dbb6651412c3627cda61d88c34da4 93 SUPERFAMILY SSF55469 25 89 6.0E-12 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SCD_RS10790 748dbb6651412c3627cda61d88c34da4 93 PANTHER PTHR23026:SF112 24 87 2.8E-20 T 22-04-2016 SCD_RS05590 78a9e535557a05ca45725021d0482c8e 438 Gene3D G3DSA:3.30.360.10 149 299 1.2E-58 T 22-04-2016 SCD_RS05590 78a9e535557a05ca45725021d0482c8e 438 PANTHER PTHR21499:SF2 4 369 4.1E-134 T 22-04-2016 SCD_RS05590 78a9e535557a05ca45725021d0482c8e 438 Gene3D G3DSA:3.40.50.720 1 148 2.8E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS05590 78a9e535557a05ca45725021d0482c8e 438 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SCD_RS05590 78a9e535557a05ca45725021d0482c8e 438 Pfam PF01842 ACT domain 354 420 1.7E-12 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SCD_RS05590 78a9e535557a05ca45725021d0482c8e 438 Pfam PF00742 Homoserine dehydrogenase 137 315 1.8E-65 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SCD_RS05590 78a9e535557a05ca45725021d0482c8e 438 PIRSF PIRSF000098 1 435 6.9E-167 T 22-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SCD_RS05590 78a9e535557a05ca45725021d0482c8e 438 SUPERFAMILY SSF51735 1 158 6.23E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS05590 78a9e535557a05ca45725021d0482c8e 438 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 2.3E-20 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 SCD_RS05590 78a9e535557a05ca45725021d0482c8e 438 Gene3D G3DSA:3.30.70.260 353 423 6.7E-10 T 22-04-2016 SCD_RS05590 78a9e535557a05ca45725021d0482c8e 438 PANTHER PTHR21499 4 369 4.1E-134 T 22-04-2016 SCD_RS05590 78a9e535557a05ca45725021d0482c8e 438 SUPERFAMILY SSF55021 353 420 1.56E-12 T 22-04-2016 SCD_RS05590 78a9e535557a05ca45725021d0482c8e 438 SUPERFAMILY SSF55347 137 302 4.45E-53 T 22-04-2016 SCD_RS01480 08e464f3af8efdd6ff8bd126b697bc47 356 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 354 2.9E-76 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SCD_RS01480 08e464f3af8efdd6ff8bd126b697bc47 356 SUPERFAMILY SSF111369 46 276 5.1E-23 T 22-04-2016 SCD_RS01480 08e464f3af8efdd6ff8bd126b697bc47 356 PANTHER PTHR30469 7 356 5.4E-75 T 22-04-2016 SCD_RS01480 08e464f3af8efdd6ff8bd126b697bc47 356 Gene3D G3DSA:2.40.50.100 62 91 8.0E-16 T 22-04-2016 SCD_RS01480 08e464f3af8efdd6ff8bd126b697bc47 356 Gene3D G3DSA:2.40.50.100 166 197 8.0E-16 T 22-04-2016 SCD_RS01480 08e464f3af8efdd6ff8bd126b697bc47 356 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 272 2.2E-22 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SCD_RS02095 bd1bc77683851a87c8c343187c8df071 285 PANTHER PTHR21091 142 273 5.1E-41 T 22-04-2016 SCD_RS02095 bd1bc77683851a87c8c343187c8df071 285 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 15 283 1.2E-105 T 22-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SCD_RS02095 bd1bc77683851a87c8c343187c8df071 285 Pfam PF02219 Methylenetetrahydrofolate reductase 11 284 4.3E-91 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SCD_RS02095 bd1bc77683851a87c8c343187c8df071 285 SUPERFAMILY SSF51730 10 284 9.22E-100 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like SCD_RS02095 bd1bc77683851a87c8c343187c8df071 285 PANTHER PTHR21091:SF31 142 273 5.1E-41 T 22-04-2016 SCD_RS02095 bd1bc77683851a87c8c343187c8df071 285 Gene3D G3DSA:3.20.20.220 9 285 1.1E-109 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like SCD_RS08440 5fe771b5023e35fd0ce8ae63a321cf9f 133 Pfam PF00460 Flagella basal body rod protein 14 39 1.1E-8 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SCD_RS08440 5fe771b5023e35fd0ce8ae63a321cf9f 133 PANTHER PTHR30435:SF12 2 133 4.4E-43 T 22-04-2016 SCD_RS08440 5fe771b5023e35fd0ce8ae63a321cf9f 133 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 131 5.5E-38 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 SCD_RS08440 5fe771b5023e35fd0ce8ae63a321cf9f 133 PANTHER PTHR30435 2 133 4.4E-43 T 22-04-2016 SCD_RS08440 5fe771b5023e35fd0ce8ae63a321cf9f 133 PIRSF PIRSF002889 1 133 3.7E-42 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 SCD_RS08440 5fe771b5023e35fd0ce8ae63a321cf9f 133 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site SCD_RS14445 a368dde3d00c0928bc1462194c5c1ba8 219 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 10 190 3.4E-38 T 22-04-2016 SCD_RS14445 a368dde3d00c0928bc1462194c5c1ba8 219 PANTHER PTHR11579:SF0 1 172 1.7E-32 T 22-04-2016 SCD_RS14445 a368dde3d00c0928bc1462194c5c1ba8 219 Gene3D G3DSA:3.40.50.150 2 217 3.4E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS14445 a368dde3d00c0928bc1462194c5c1ba8 219 PANTHER PTHR11579 1 172 1.7E-32 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SCD_RS14445 a368dde3d00c0928bc1462194c5c1ba8 219 SUPERFAMILY SSF53335 1 207 3.65E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS03345 39a8bc65145468af0547a8394e5400c9 148 Gene3D G3DSA:3.10.129.10 14 146 3.9E-45 T 22-04-2016 IPR029069 HotDog domain SCD_RS03345 39a8bc65145468af0547a8394e5400c9 148 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 20 137 2.0E-34 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 SCD_RS03345 39a8bc65145468af0547a8394e5400c9 148 PANTHER PTHR31793 17 146 1.6E-38 T 22-04-2016 SCD_RS03345 39a8bc65145468af0547a8394e5400c9 148 Pfam PF03061 Thioesterase superfamily 31 113 4.6E-15 T 22-04-2016 IPR006683 Thioesterase domain SCD_RS03345 39a8bc65145468af0547a8394e5400c9 148 PANTHER PTHR31793:SF9 17 146 1.6E-38 T 22-04-2016 SCD_RS03345 39a8bc65145468af0547a8394e5400c9 148 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 17 142 3.2E-49 T 22-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- SCD_RS03345 39a8bc65145468af0547a8394e5400c9 148 PIRSF PIRSF003230 8 148 2.8E-43 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 SCD_RS03345 39a8bc65145468af0547a8394e5400c9 148 SUPERFAMILY SSF54637 16 146 1.25E-39 T 22-04-2016 IPR029069 HotDog domain SCD_RS05040 a14aef87a828167df4f5f170385e9136 191 PANTHER PTHR19136:SF78 2 184 3.3E-34 T 22-04-2016 SCD_RS05040 a14aef87a828167df4f5f170385e9136 191 SUPERFAMILY SSF53448 2 184 2.14E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS05040 a14aef87a828167df4f5f170385e9136 191 Pfam PF12804 MobA-like NTP transferase domain 4 161 2.6E-35 T 22-04-2016 IPR025877 MobA-like NTP transferase SCD_RS05040 a14aef87a828167df4f5f170385e9136 191 PANTHER PTHR19136 2 184 3.3E-34 T 22-04-2016 SCD_RS05040 a14aef87a828167df4f5f170385e9136 191 Gene3D G3DSA:3.90.550.10 2 188 1.3E-30 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS12265 a1acdc860430c63106a4087f0337f1d1 268 Pfam PF03799 Cell division protein FtsQ 110 220 2.9E-22 T 22-04-2016 IPR005548 Cell division protein FtsQ/DivIB SCD_RS12265 a1acdc860430c63106a4087f0337f1d1 268 Pfam PF08478 POTRA domain, FtsQ-type 37 106 1.6E-20 T 22-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type SCD_RS12265 a1acdc860430c63106a4087f0337f1d1 268 PANTHER PTHR35851:SF1 14 245 5.1E-51 T 22-04-2016 SCD_RS12265 a1acdc860430c63106a4087f0337f1d1 268 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 7 228 22.828 T 22-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 SCD_RS12265 a1acdc860430c63106a4087f0337f1d1 268 PANTHER PTHR35851 14 245 5.1E-51 T 22-04-2016 SCD_RS00785 eeaeee4ed766fa05782ae766fb64a7a4 166 SUPERFAMILY SSF75169 40 164 8.24E-13 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS00785 eeaeee4ed766fa05782ae766fb64a7a4 166 Gene3D G3DSA:3.40.1260.10 40 163 7.1E-13 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS00785 eeaeee4ed766fa05782ae766fb64a7a4 166 Pfam PF02635 DsrE/DsrF-like family 48 163 4.5E-7 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein SCD_RS08780 814b60a897d22775712f3a5e6275ca32 209 PANTHER PTHR10381 14 206 1.5E-135 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SCD_RS08780 814b60a897d22775712f3a5e6275ca32 209 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 14 204 44.181 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SCD_RS08780 814b60a897d22775712f3a5e6275ca32 209 SUPERFAMILY SSF52096 22 204 1.63E-74 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SCD_RS08780 814b60a897d22775712f3a5e6275ca32 209 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 13 202 9.8E-104 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SCD_RS08780 814b60a897d22775712f3a5e6275ca32 209 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 101 112 - T 22-04-2016 IPR018215 ClpP, Ser active site SCD_RS08780 814b60a897d22775712f3a5e6275ca32 209 PANTHER PTHR10381:SF22 14 206 1.5E-135 T 22-04-2016 SCD_RS08780 814b60a897d22775712f3a5e6275ca32 209 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 123 136 - T 22-04-2016 IPR033135 ClpP, histidine active site SCD_RS08780 814b60a897d22775712f3a5e6275ca32 209 PRINTS PR00127 Clp protease catalytic subunit P signature 30 45 2.2E-52 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SCD_RS08780 814b60a897d22775712f3a5e6275ca32 209 PRINTS PR00127 Clp protease catalytic subunit P signature 179 198 2.2E-52 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SCD_RS08780 814b60a897d22775712f3a5e6275ca32 209 PRINTS PR00127 Clp protease catalytic subunit P signature 101 118 2.2E-52 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SCD_RS08780 814b60a897d22775712f3a5e6275ca32 209 PRINTS PR00127 Clp protease catalytic subunit P signature 70 90 2.2E-52 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SCD_RS08780 814b60a897d22775712f3a5e6275ca32 209 PRINTS PR00127 Clp protease catalytic subunit P signature 122 141 2.2E-52 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SCD_RS08780 814b60a897d22775712f3a5e6275ca32 209 Pfam PF00574 Clp protease 24 203 1.4E-87 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SCD_RS08780 814b60a897d22775712f3a5e6275ca32 209 Gene3D G3DSA:3.90.226.10 14 204 1.4E-89 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SCD_RS07325 7861f3f419395192a8b5f6d418afa7f8 804 SUPERFAMILY SSF88697 40 233 6.46E-22 T 22-04-2016 IPR015947 PUA-like domain SCD_RS07325 7861f3f419395192a8b5f6d418afa7f8 804 PANTHER PTHR10046 19 804 0.0 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 SCD_RS07325 7861f3f419395192a8b5f6d418afa7f8 804 PIRSF PIRSF001174 27 804 1.5E-288 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 SCD_RS07325 7861f3f419395192a8b5f6d418afa7f8 804 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 385 522 1.4E-22 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SCD_RS07325 7861f3f419395192a8b5f6d418afa7f8 804 SUPERFAMILY SSF54211 626 802 1.18E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SCD_RS07325 7861f3f419395192a8b5f6d418afa7f8 804 SMART SM00382 381 529 5.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS07325 7861f3f419395192a8b5f6d418afa7f8 804 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 606 802 2.1E-74 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 SCD_RS07325 7861f3f419395192a8b5f6d418afa7f8 804 SMART SM00464 40 234 2.0E-33 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 SCD_RS07325 7861f3f419395192a8b5f6d418afa7f8 804 Gene3D G3DSA:3.40.50.300 345 522 4.2E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07325 7861f3f419395192a8b5f6d418afa7f8 804 SUPERFAMILY SSF52540 342 617 4.21E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07325 7861f3f419395192a8b5f6d418afa7f8 804 Gene3D G3DSA:1.10.8.60 525 617 1.7E-28 T 22-04-2016 SCD_RS07325 7861f3f419395192a8b5f6d418afa7f8 804 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 41 234 5.1E-29 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 SCD_RS07325 7861f3f419395192a8b5f6d418afa7f8 804 Gene3D G3DSA:3.30.230.10 624 804 9.4E-66 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SCD_RS07325 7861f3f419395192a8b5f6d418afa7f8 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 705 724 1.71E-49 T 22-04-2016 SCD_RS07325 7861f3f419395192a8b5f6d418afa7f8 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 389 408 1.71E-49 T 22-04-2016 SCD_RS07325 7861f3f419395192a8b5f6d418afa7f8 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 758 776 1.71E-49 T 22-04-2016 SCD_RS07325 7861f3f419395192a8b5f6d418afa7f8 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 735 754 1.71E-49 T 22-04-2016 SCD_RS07325 7861f3f419395192a8b5f6d418afa7f8 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 626 642 1.71E-49 T 22-04-2016 SCD_RS07325 7861f3f419395192a8b5f6d418afa7f8 804 Hamap MF_01973 Lon protease [lon]. 41 804 61.483 T 22-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 SCD_RS07325 7861f3f419395192a8b5f6d418afa7f8 804 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 708 716 - T 22-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 SCD_RS07325 7861f3f419395192a8b5f6d418afa7f8 804 TIGRFAM TIGR00763 lon: endopeptidase La 43 803 1.6E-290 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 SCD_RS12000 0af3bc789e09176867e71135c45c493e 1113 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 25 560 3.2E-277 T 22-04-2016 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622 SCD_RS12000 0af3bc789e09176867e71135c45c493e 1113 Gene3D G3DSA:2.60.40.1180 480 560 1.1E-17 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta SCD_RS12000 0af3bc789e09176867e71135c45c493e 1113 PANTHER PTHR10357:SF164 456 586 4.6E-263 T 22-04-2016 SCD_RS12000 0af3bc789e09176867e71135c45c493e 1113 PANTHER PTHR10357:SF164 21 417 4.6E-263 T 22-04-2016 SCD_RS12000 0af3bc789e09176867e71135c45c493e 1113 PANTHER PTHR10357 456 586 4.6E-263 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SCD_RS12000 0af3bc789e09176867e71135c45c493e 1113 PANTHER PTHR10357 21 417 4.6E-263 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SCD_RS12000 0af3bc789e09176867e71135c45c493e 1113 SMART SM00642 33 432 1.4E-98 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SCD_RS12000 0af3bc789e09176867e71135c45c493e 1113 Pfam PF00128 Alpha amylase, catalytic domain 48 401 3.8E-71 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SCD_RS12000 0af3bc789e09176867e71135c45c493e 1113 Pfam PF16657 Maltogenic Amylase, C-terminal domain 480 557 7.6E-28 T 22-04-2016 IPR032091 Maltogenic Amylase, C-terminal SCD_RS12000 0af3bc789e09176867e71135c45c493e 1113 SUPERFAMILY SSF56112 750 834 1.69E-11 T 22-04-2016 IPR011009 Protein kinase-like domain SCD_RS12000 0af3bc789e09176867e71135c45c493e 1113 SUPERFAMILY SSF56112 861 1036 1.69E-11 T 22-04-2016 IPR011009 Protein kinase-like domain SCD_RS12000 0af3bc789e09176867e71135c45c493e 1113 Gene3D G3DSA:3.90.400.10 125 193 7.2E-24 T 22-04-2016 SCD_RS12000 0af3bc789e09176867e71135c45c493e 1113 SUPERFAMILY SSF51011 484 560 2.32E-16 T 22-04-2016 SCD_RS12000 0af3bc789e09176867e71135c45c493e 1113 SUPERFAMILY SSF51445 36 480 9.93E-126 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SCD_RS12000 0af3bc789e09176867e71135c45c493e 1113 Gene3D G3DSA:3.20.20.80 27 124 1.3E-104 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SCD_RS12000 0af3bc789e09176867e71135c45c493e 1113 Gene3D G3DSA:3.20.20.80 459 472 1.3E-104 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SCD_RS12000 0af3bc789e09176867e71135c45c493e 1113 Gene3D G3DSA:3.20.20.80 201 426 1.3E-104 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SCD_RS12000 0af3bc789e09176867e71135c45c493e 1113 TIGRFAM TIGR02457 TreS_Cterm: putative maltokinase 595 1108 5.3E-132 T 22-04-2016 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain SCD_RS02950 32563e7d92092790e4b2f6978e50dfa9 111 SUPERFAMILY SSF54197 1 105 4.33E-36 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SCD_RS02950 32563e7d92092790e4b2f6978e50dfa9 111 Pfam PF01230 HIT domain 12 105 2.5E-22 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SCD_RS02950 32563e7d92092790e4b2f6978e50dfa9 111 PANTHER PTHR23089:SF2 3 108 1.8E-41 T 22-04-2016 SCD_RS02950 32563e7d92092790e4b2f6978e50dfa9 111 Gene3D G3DSA:3.30.428.10 1 107 2.0E-36 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SCD_RS02950 32563e7d92092790e4b2f6978e50dfa9 111 PANTHER PTHR23089 3 108 1.8E-41 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SCD_RS02950 32563e7d92092790e4b2f6978e50dfa9 111 ProSitePatterns PS00892 HIT domain signature. 86 104 - T 22-04-2016 IPR019808 Histidine triad, conserved site SCD_RS02950 32563e7d92092790e4b2f6978e50dfa9 111 PRINTS PR00332 Histidine triad family signature 5 21 2.1E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SCD_RS02950 32563e7d92092790e4b2f6978e50dfa9 111 PRINTS PR00332 Histidine triad family signature 26 44 2.1E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SCD_RS02950 32563e7d92092790e4b2f6978e50dfa9 111 PRINTS PR00332 Histidine triad family signature 93 103 2.1E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SCD_RS07050 9353d5301a6b28db7e92f514e3c29140 241 PANTHER PTHR24220:SF86 11 232 2.0E-77 T 22-04-2016 SCD_RS07050 9353d5301a6b28db7e92f514e3c29140 241 Gene3D G3DSA:3.40.50.300 4 232 1.5E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07050 9353d5301a6b28db7e92f514e3c29140 241 Pfam PF00005 ABC transporter 29 180 1.1E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS07050 9353d5301a6b28db7e92f514e3c29140 241 SMART SM00382 38 228 9.0E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS07050 9353d5301a6b28db7e92f514e3c29140 241 SUPERFAMILY SSF52540 10 233 8.44E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07050 9353d5301a6b28db7e92f514e3c29140 241 PANTHER PTHR24220 11 232 2.0E-77 T 22-04-2016 SCD_RS07050 9353d5301a6b28db7e92f514e3c29140 241 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS01815 cc5846db1e3c4346f899ff9fd5c47dc2 206 SUPERFAMILY SSF46626 29 109 1.33E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01815 cc5846db1e3c4346f899ff9fd5c47dc2 206 PANTHER PTHR33751 26 204 9.7E-16 T 22-04-2016 SCD_RS01815 cc5846db1e3c4346f899ff9fd5c47dc2 206 PIRSF PIRSF000005 3 206 5.9E-30 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 SCD_RS01815 cc5846db1e3c4346f899ff9fd5c47dc2 206 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 127 201 1.3E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01815 cc5846db1e3c4346f899ff9fd5c47dc2 206 SUPERFAMILY SSF46626 120 205 3.92E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01815 cc5846db1e3c4346f899ff9fd5c47dc2 206 PANTHER PTHR33751:SF3 26 204 9.7E-16 T 22-04-2016 SCD_RS01815 cc5846db1e3c4346f899ff9fd5c47dc2 206 Gene3D G3DSA:1.10.760.10 120 205 1.5E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01815 cc5846db1e3c4346f899ff9fd5c47dc2 206 Gene3D G3DSA:1.10.760.10 26 113 4.2E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS06385 4696299fed945b739a6d1c6063e6f0a6 305 Gene3D G3DSA:3.40.50.300 18 181 2.4E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06385 4696299fed945b739a6d1c6063e6f0a6 305 PIRSF PIRSF002849 1 305 2.1E-116 T 22-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted SCD_RS06385 4696299fed945b739a6d1c6063e6f0a6 305 PANTHER PTHR11603 1 305 4.8E-155 T 22-04-2016 SCD_RS06385 4696299fed945b739a6d1c6063e6f0a6 305 PANTHER PTHR11603:SF155 1 305 4.8E-155 T 22-04-2016 SCD_RS06385 4696299fed945b739a6d1c6063e6f0a6 305 Gene3D G3DSA:1.10.8.300 197 285 1.4E-24 T 22-04-2016 SCD_RS06385 4696299fed945b739a6d1c6063e6f0a6 305 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 35 165 8.6E-64 T 22-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 SCD_RS06385 4696299fed945b739a6d1c6063e6f0a6 305 SUPERFAMILY SSF52540 16 279 7.19E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06385 4696299fed945b739a6d1c6063e6f0a6 305 SMART SM00382 32 173 7.5E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS09795 85fed4ca73971739195b3730ccb1e788 184 PANTHER PTHR11938 5 172 2.5E-67 T 22-04-2016 SCD_RS09795 85fed4ca73971739195b3730ccb1e788 184 Gene3D G3DSA:3.30.70.20 44 173 5.0E-17 T 22-04-2016 SCD_RS09795 85fed4ca73971739195b3730ccb1e788 184 Pfam PF04060 Putative Fe-S cluster 41 73 5.2E-16 T 22-04-2016 IPR007202 4Fe-4S domain GO:0051536 SCD_RS09795 85fed4ca73971739195b3730ccb1e788 184 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS09795 85fed4ca73971739195b3730ccb1e788 184 PIRSF PIRSF005784 1 184 8.7E-80 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 SCD_RS09795 85fed4ca73971739195b3730ccb1e788 184 SUPERFAMILY SSF54862 36 171 2.55E-31 T 22-04-2016 SCD_RS09795 85fed4ca73971739195b3730ccb1e788 184 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 1 182 39.595 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 SCD_RS09795 85fed4ca73971739195b3730ccb1e788 184 Pfam PF14697 4Fe-4S dicluster domain 107 161 2.1E-15 T 22-04-2016 SCD_RS09795 85fed4ca73971739195b3730ccb1e788 184 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 181 1.7E-76 T 22-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 SCD_RS09795 85fed4ca73971739195b3730ccb1e788 184 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 114 125 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS09795 85fed4ca73971739195b3730ccb1e788 184 PANTHER PTHR11938:SF64 5 172 2.5E-67 T 22-04-2016 SCD_RS11795 996ba04ab9e09df0ddaa16ceb5d2c0bd 259 SUPERFAMILY SSF49879 2 93 3.83E-29 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 SCD_RS11795 996ba04ab9e09df0ddaa16ceb5d2c0bd 259 PANTHER PTHR23308 164 174 6.7E-17 T 22-04-2016 SCD_RS11795 996ba04ab9e09df0ddaa16ceb5d2c0bd 259 PANTHER PTHR23308 9 98 6.7E-17 T 22-04-2016 SCD_RS11795 996ba04ab9e09df0ddaa16ceb5d2c0bd 259 Gene3D G3DSA:2.60.200.20 176 256 1.2E-5 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 SCD_RS11795 996ba04ab9e09df0ddaa16ceb5d2c0bd 259 Gene3D G3DSA:2.60.200.20 2 93 1.2E-28 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 SCD_RS11795 996ba04ab9e09df0ddaa16ceb5d2c0bd 259 SUPERFAMILY SSF49879 177 257 2.24E-6 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 SCD_RS11795 996ba04ab9e09df0ddaa16ceb5d2c0bd 259 Pfam PF00498 FHA domain 23 86 9.3E-20 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 SCD_RS11795 996ba04ab9e09df0ddaa16ceb5d2c0bd 259 SMART SM00240 22 72 9.5E-14 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 SCD_RS14795 8e629b3dcbf69ca45a89c100fab62b4e 451 Gene3D G3DSA:3.40.50.2300 5 136 2.7E-25 T 22-04-2016 SCD_RS14795 8e629b3dcbf69ca45a89c100fab62b4e 451 SUPERFAMILY SSF46689 361 451 9.56E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS14795 8e629b3dcbf69ca45a89c100fab62b4e 451 SMART SM00448 6 120 6.7E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS14795 8e629b3dcbf69ca45a89c100fab62b4e 451 Pfam PF02954 Bacterial regulatory protein, Fis family 409 442 5.5E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS14795 8e629b3dcbf69ca45a89c100fab62b4e 451 Pfam PF00072 Response regulator receiver domain 9 116 2.1E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS14795 8e629b3dcbf69ca45a89c100fab62b4e 451 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 172 185 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SCD_RS14795 8e629b3dcbf69ca45a89c100fab62b4e 451 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 431 451 1.4E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS14795 8e629b3dcbf69ca45a89c100fab62b4e 451 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 414 431 1.4E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS14795 8e629b3dcbf69ca45a89c100fab62b4e 451 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SCD_RS14795 8e629b3dcbf69ca45a89c100fab62b4e 451 Gene3D G3DSA:1.10.10.60 395 451 9.2E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS14795 8e629b3dcbf69ca45a89c100fab62b4e 451 TIGRFAM TIGR02915 PEP_resp_reg: PEP-CTERM-box response regulator transcription factor 8 450 1.9E-225 T 22-04-2016 IPR014264 Signal transduction response regulator, PEP-CTERM system, putative SCD_RS14795 8e629b3dcbf69ca45a89c100fab62b4e 451 SUPERFAMILY SSF52172 4 193 2.13E-32 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS14795 8e629b3dcbf69ca45a89c100fab62b4e 451 Gene3D G3DSA:1.10.8.60 322 390 2.3E-22 T 22-04-2016 SCD_RS14795 8e629b3dcbf69ca45a89c100fab62b4e 451 PANTHER PTHR32071 1 451 6.1E-176 T 22-04-2016 SCD_RS14795 8e629b3dcbf69ca45a89c100fab62b4e 451 SUPERFAMILY SSF52540 147 389 2.53E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14795 8e629b3dcbf69ca45a89c100fab62b4e 451 SMART SM00382 168 311 4.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS14795 8e629b3dcbf69ca45a89c100fab62b4e 451 Pfam PF00158 Sigma-54 interaction domain 148 314 7.9E-69 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SCD_RS14795 8e629b3dcbf69ca45a89c100fab62b4e 451 Gene3D G3DSA:3.40.50.300 146 320 5.8E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12815 ab68c3fe571ab4d562520b261bf252d1 443 SUPERFAMILY SSF102114 127 371 5.76E-60 T 22-04-2016 SCD_RS12815 ab68c3fe571ab4d562520b261bf252d1 443 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 SCD_RS12815 ab68c3fe571ab4d562520b261bf252d1 443 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 2.4E-180 T 22-04-2016 SCD_RS12815 ab68c3fe571ab4d562520b261bf252d1 443 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 3.1E-27 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 SCD_RS12815 ab68c3fe571ab4d562520b261bf252d1 443 Pfam PF04055 Radical SAM superfamily 151 325 3.5E-27 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SCD_RS12815 ab68c3fe571ab4d562520b261bf252d1 443 PANTHER PTHR11918 3 440 4.9E-196 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein SCD_RS12815 ab68c3fe571ab4d562520b261bf252d1 443 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 441 71.496 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 SCD_RS12815 ab68c3fe571ab4d562520b261bf252d1 443 SMART SM00729 147 367 2.7E-57 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SCD_RS12815 ab68c3fe571ab4d562520b261bf252d1 443 Gene3D G3DSA:3.80.30.20 147 380 4.9E-79 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SCD_RS12815 ab68c3fe571ab4d562520b261bf252d1 443 PANTHER PTHR11918:SF43 3 440 4.9E-196 T 22-04-2016 SCD_RS12815 ab68c3fe571ab4d562520b261bf252d1 443 Pfam PF01938 TRAM domain 378 440 3.1E-18 T 22-04-2016 IPR002792 TRAM domain SCD_RS12815 ab68c3fe571ab4d562520b261bf252d1 443 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 3.1E-145 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 SCD_RS01825 83bda6727ac83beaa048da9984fe60cb 302 SMART SM00887 24 283 6.3E-61 T 22-04-2016 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 SCD_RS01825 83bda6727ac83beaa048da9984fe60cb 302 Pfam PF09459 Ethylbenzene dehydrogenase 98 283 8.4E-39 T 22-04-2016 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 SCD_RS09520 a1b3ac38cfee7e9ab61691135bf1446a 588 Gene3D G3DSA:3.20.110.10 4 69 1.3E-86 T 22-04-2016 IPR027291 Glycoside hydrolase 38/57, N-terminal domain SCD_RS09520 a1b3ac38cfee7e9ab61691135bf1446a 588 Gene3D G3DSA:3.20.110.10 146 479 1.3E-86 T 22-04-2016 IPR027291 Glycoside hydrolase 38/57, N-terminal domain SCD_RS09520 a1b3ac38cfee7e9ab61691135bf1446a 588 SUPERFAMILY SSF88713 5 92 1.56E-87 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SCD_RS09520 a1b3ac38cfee7e9ab61691135bf1446a 588 SUPERFAMILY SSF88713 188 479 1.56E-87 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SCD_RS09520 a1b3ac38cfee7e9ab61691135bf1446a 588 SUPERFAMILY SSF88713 143 161 1.56E-87 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SCD_RS09520 a1b3ac38cfee7e9ab61691135bf1446a 588 PANTHER PTHR36306:SF1 1 439 6.4E-117 T 22-04-2016 SCD_RS09520 a1b3ac38cfee7e9ab61691135bf1446a 588 PANTHER PTHR36306:SF1 460 571 6.4E-117 T 22-04-2016 SCD_RS09520 a1b3ac38cfee7e9ab61691135bf1446a 588 Pfam PF03065 Glycosyl hydrolase family 57 9 491 8.0E-71 T 22-04-2016 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 SCD_RS09520 a1b3ac38cfee7e9ab61691135bf1446a 588 PANTHER PTHR36306 1 439 6.4E-117 T 22-04-2016 SCD_RS09520 a1b3ac38cfee7e9ab61691135bf1446a 588 PANTHER PTHR36306 460 571 6.4E-117 T 22-04-2016 SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 SMART SM00086 309 351 1.7 T 22-04-2016 IPR001610 PAC motif SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 SMART SM00086 440 482 0.018 T 22-04-2016 IPR001610 PAC motif SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 Pfam PF00563 EAL domain 670 905 3.1E-67 T 22-04-2016 IPR001633 EAL domain SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 Pfam PF13682 Chemoreceptor zinc-binding domain 946 1013 1.9E-13 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 SMART SM00267 482 654 1.3E-62 T 22-04-2016 IPR000160 GGDEF domain SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 SMART SM00052 663 910 2.2E-91 T 22-04-2016 IPR001633 EAL domain SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 233 358 1.8E-15 T 22-04-2016 IPR000014 PAS domain SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 369 487 5.6E-12 T 22-04-2016 IPR000014 PAS domain SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 SMART SM00091 363 432 3.7 T 22-04-2016 IPR000014 PAS domain SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 SMART SM00091 236 304 1.7E-5 T 22-04-2016 IPR000014 PAS domain SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 Pfam PF00990 Diguanylate cyclase, GGDEF domain 494 650 7.9E-48 T 22-04-2016 IPR000160 GGDEF domain SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 PANTHER PTHR10799 429 764 2.5E-69 T 22-04-2016 SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 SMART SM00304 177 229 8.8E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 Pfam PF16448 LapD/MoxY periplasmic domain 29 151 1.2E-16 T 22-04-2016 IPR032244 LapD/MoxY, periplasmic domain SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 PANTHER PTHR10799:SF774 429 764 2.5E-69 T 22-04-2016 SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 SUPERFAMILY SSF55073 498 655 4.71E-49 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 SUPERFAMILY SSF55785 348 480 1.13E-17 T 22-04-2016 IPR000014 PAS domain SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 Pfam PF08448 PAS fold 369 484 5.6E-11 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 Pfam PF08448 PAS fold 243 352 4.7E-12 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 Gene3D G3DSA:3.30.450.20 229 348 3.4E-19 T 22-04-2016 SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 Gene3D G3DSA:3.30.450.20 349 480 3.6E-17 T 22-04-2016 SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 Pfam PF00672 HAMP domain 161 226 1.5E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 Gene3D G3DSA:3.20.20.450 670 917 3.7E-85 T 22-04-2016 IPR001633 EAL domain SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 SUPERFAMILY SSF141868 670 918 9.42E-83 T 22-04-2016 IPR001633 EAL domain SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 490 652 6.4E-41 T 22-04-2016 IPR000160 GGDEF domain SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 SUPERFAMILY SSF55785 224 349 1.4E-17 T 22-04-2016 IPR000014 PAS domain SCD_RS05575 caf4eabc4f1f76dd60e9e75639cb2f0e 1054 Gene3D G3DSA:3.30.70.270 495 661 2.6E-55 T 22-04-2016 SCD_RS04490 56a812637da317ceaf164e499748d646 194 Gene3D G3DSA:2.30.22.10 136 192 3.4E-26 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 SCD_RS04490 56a812637da317ceaf164e499748d646 194 PRINTS PR00773 GrpE protein signature 143 158 6.1E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SCD_RS04490 56a812637da317ceaf164e499748d646 194 PRINTS PR00773 GrpE protein signature 63 79 6.1E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SCD_RS04490 56a812637da317ceaf164e499748d646 194 PRINTS PR00773 GrpE protein signature 91 106 6.1E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SCD_RS04490 56a812637da317ceaf164e499748d646 194 PRINTS PR00773 GrpE protein signature 169 188 6.1E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SCD_RS04490 56a812637da317ceaf164e499748d646 194 PANTHER PTHR21237 38 193 2.4E-57 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SCD_RS04490 56a812637da317ceaf164e499748d646 194 Gene3D G3DSA:3.90.20.20 41 134 8.3E-26 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil SCD_RS04490 56a812637da317ceaf164e499748d646 194 Hamap MF_01151 Protein GrpE [grpE]. 4 190 19.907 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SCD_RS04490 56a812637da317ceaf164e499748d646 194 ProSitePatterns PS01071 grpE protein signature. 146 188 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SCD_RS04490 56a812637da317ceaf164e499748d646 194 SUPERFAMILY SSF51064 137 191 2.62E-18 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 SCD_RS04490 56a812637da317ceaf164e499748d646 194 SUPERFAMILY SSF58014 42 134 2.22E-22 T 22-04-2016 SCD_RS04490 56a812637da317ceaf164e499748d646 194 Pfam PF01025 GrpE 37 190 1.5E-47 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SCD_RS02580 c52539ff2dc4a3212027b9cd99e737bc 349 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 5 333 3.7E-138 T 22-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 SCD_RS02580 c52539ff2dc4a3212027b9cd99e737bc 349 Gene3D G3DSA:3.40.50.10470 156 341 4.1E-75 T 22-04-2016 SCD_RS02580 c52539ff2dc4a3212027b9cd99e737bc 349 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 34 333 1.4E-118 T 22-04-2016 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 SCD_RS02580 c52539ff2dc4a3212027b9cd99e737bc 349 Pfam PF01008 Initiation factor 2 subunit family 45 332 1.1E-87 T 22-04-2016 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 SCD_RS02580 c52539ff2dc4a3212027b9cd99e737bc 349 Gene3D G3DSA:1.20.120.420 3 155 1.3E-53 T 22-04-2016 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 SCD_RS02580 c52539ff2dc4a3212027b9cd99e737bc 349 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 2 344 41.336 T 22-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 SCD_RS02580 c52539ff2dc4a3212027b9cd99e737bc 349 SUPERFAMILY SSF100950 4 338 6.91E-121 T 22-04-2016 SCD_RS02580 c52539ff2dc4a3212027b9cd99e737bc 349 PANTHER PTHR10233:SF6 1 349 1.5E-169 T 22-04-2016 SCD_RS02580 c52539ff2dc4a3212027b9cd99e737bc 349 PANTHER PTHR10233 1 349 1.5E-169 T 22-04-2016 SCD_RS03935 88f8c417c966719decfc335ddee0f257 458 Gene3D G3DSA:3.40.50.300 131 305 1.6E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03935 88f8c417c966719decfc335ddee0f257 458 Gene3D G3DSA:1.10.8.60 306 383 2.8E-21 T 22-04-2016 SCD_RS03935 88f8c417c966719decfc335ddee0f257 458 Gene3D G3DSA:1.10.10.60 406 453 3.6E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS03935 88f8c417c966719decfc335ddee0f257 458 SUPERFAMILY SSF52540 133 373 4.63E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03935 88f8c417c966719decfc335ddee0f257 458 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 345 354 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SCD_RS03935 88f8c417c966719decfc335ddee0f257 458 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 417 434 2.2E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS03935 88f8c417c966719decfc335ddee0f257 458 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 434 454 2.2E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS03935 88f8c417c966719decfc335ddee0f257 458 SMART SM00382 153 296 5.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS03935 88f8c417c966719decfc335ddee0f257 458 Pfam PF00158 Sigma-54 interaction domain 133 298 1.1E-62 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SCD_RS03935 88f8c417c966719decfc335ddee0f257 458 PANTHER PTHR32071 129 453 1.7E-137 T 22-04-2016 SCD_RS03935 88f8c417c966719decfc335ddee0f257 458 SUPERFAMILY SSF46689 346 453 1.08E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS03935 88f8c417c966719decfc335ddee0f257 458 Pfam PF02954 Bacterial regulatory protein, Fis family 411 451 6.4E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS03935 88f8c417c966719decfc335ddee0f257 458 Pfam PF08448 PAS fold 18 110 4.5E-9 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS03935 88f8c417c966719decfc335ddee0f257 458 Gene3D G3DSA:3.30.450.20 17 110 2.7E-11 T 22-04-2016 SCD_RS03935 88f8c417c966719decfc335ddee0f257 458 SUPERFAMILY SSF55785 8 113 5.76E-12 T 22-04-2016 IPR000014 PAS domain SCD_RS13755 56517ca2f8fefae473eab31e3f0eb09e 449 Pfam PF02347 Glycine cleavage system P-protein 3 444 5.7E-122 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 SCD_RS13755 56517ca2f8fefae473eab31e3f0eb09e 449 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 1 448 46.289 T 22-04-2016 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 SCD_RS13755 56517ca2f8fefae473eab31e3f0eb09e 449 PANTHER PTHR11773 1 448 5.6E-196 T 22-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 SCD_RS13755 56517ca2f8fefae473eab31e3f0eb09e 449 PIRSF PIRSF006815 1 449 9.4E-165 T 22-04-2016 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 SCD_RS13755 56517ca2f8fefae473eab31e3f0eb09e 449 Gene3D G3DSA:3.40.640.10 90 340 6.4E-17 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS13755 56517ca2f8fefae473eab31e3f0eb09e 449 SUPERFAMILY SSF53383 1 448 7.14E-114 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS13755 56517ca2f8fefae473eab31e3f0eb09e 449 PANTHER PTHR11773:SF2 1 448 5.6E-196 T 22-04-2016 SCD_RS10635 9dde7dcd7000dc91c1600be4aeb90c8f 125 SUPERFAMILY SSF52788 1 109 7.2E-24 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SCD_RS10635 9dde7dcd7000dc91c1600be4aeb90c8f 125 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 1 107 5.4E-11 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SCD_RS10635 9dde7dcd7000dc91c1600be4aeb90c8f 125 PANTHER PTHR11717 1 108 2.0E-20 T 22-04-2016 SCD_RS10635 9dde7dcd7000dc91c1600be4aeb90c8f 125 SMART SM00226 1 114 1.1E-7 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SCD_RS10635 9dde7dcd7000dc91c1600be4aeb90c8f 125 PANTHER PTHR11717:SF18 1 108 2.0E-20 T 22-04-2016 SCD_RS10635 9dde7dcd7000dc91c1600be4aeb90c8f 125 Gene3D G3DSA:3.40.50.270 1 108 7.5E-24 T 22-04-2016 SCD_RS05215 55e492807bc600d721e0e472fa6f26e2 776 SUPERFAMILY SSF158832 2 331 4.05E-112 T 22-04-2016 SCD_RS05215 55e492807bc600d721e0e472fa6f26e2 776 SUPERFAMILY SSF50249 649 735 3.73E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS05215 55e492807bc600d721e0e472fa6f26e2 776 Gene3D G3DSA:2.40.50.140 644 732 2.6E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS05215 55e492807bc600d721e0e472fa6f26e2 776 Gene3D G3DSA:1.10.10.650 2 109 4.6E-43 T 22-04-2016 IPR023319 Tex-like protein, HTH domain SCD_RS05215 55e492807bc600d721e0e472fa6f26e2 776 SMART SM00732 336 435 1.7E-31 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SCD_RS05215 55e492807bc600d721e0e472fa6f26e2 776 PANTHER PTHR10724 1 756 0.0 T 22-04-2016 SCD_RS05215 55e492807bc600d721e0e472fa6f26e2 776 Gene3D G3DSA:3.30.420.140 336 461 1.8E-49 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SCD_RS05215 55e492807bc600d721e0e472fa6f26e2 776 Gene3D G3DSA:1.10.3500.10 110 332 5.2E-98 T 22-04-2016 IPR023323 Tex-like domain SCD_RS05215 55e492807bc600d721e0e472fa6f26e2 776 Gene3D G3DSA:1.10.3500.10 462 509 5.2E-98 T 22-04-2016 IPR023323 Tex-like domain SCD_RS05215 55e492807bc600d721e0e472fa6f26e2 776 Pfam PF09371 Tex-like protein N-terminal domain 9 192 3.2E-68 T 22-04-2016 IPR018974 Tex-like protein, N-terminal SCD_RS05215 55e492807bc600d721e0e472fa6f26e2 776 SMART SM00316 660 731 4.0E-23 T 22-04-2016 IPR022967 RNA-binding domain, S1 SCD_RS05215 55e492807bc600d721e0e472fa6f26e2 776 PANTHER PTHR10724:SF1 1 756 0.0 T 22-04-2016 SCD_RS05215 55e492807bc600d721e0e472fa6f26e2 776 SUPERFAMILY SSF47781 481 568 8.89E-27 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SCD_RS05215 55e492807bc600d721e0e472fa6f26e2 776 Pfam PF00575 S1 RNA binding domain 660 731 2.8E-19 T 22-04-2016 IPR003029 S1 domain GO:0003676 SCD_RS05215 55e492807bc600d721e0e472fa6f26e2 776 SUPERFAMILY SSF47781 571 643 3.11E-20 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SCD_RS05215 55e492807bc600d721e0e472fa6f26e2 776 SUPERFAMILY SSF53098 332 480 3.03E-48 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS05215 55e492807bc600d721e0e472fa6f26e2 776 Pfam PF12836 Helix-hairpin-helix motif 502 566 6.2E-27 T 22-04-2016 SCD_RS05215 55e492807bc600d721e0e472fa6f26e2 776 Pfam PF16921 Tex protein YqgF-like domain 337 462 1.4E-50 T 22-04-2016 IPR032639 Tex protein, YqgF-like domain SCD_RS05215 55e492807bc600d721e0e472fa6f26e2 776 Gene3D G3DSA:1.10.150.310 510 641 3.6E-45 T 22-04-2016 IPR023097 Tex RuvX-like domain SCD_RS11615 667dfee4a132c80750bee19374690d2b 190 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 108 181 5.2E-26 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SCD_RS11615 667dfee4a132c80750bee19374690d2b 190 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 145 161 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SCD_RS11615 667dfee4a132c80750bee19374690d2b 190 Hamap MF_00105 Transcription elongation factor GreA [greA]. 27 180 27.617 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 SCD_RS11615 667dfee4a132c80750bee19374690d2b 190 PIRSF PIRSF006092 27 183 8.2E-45 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 SCD_RS11615 667dfee4a132c80750bee19374690d2b 190 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 28 182 1.3E-68 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 SCD_RS11615 667dfee4a132c80750bee19374690d2b 190 Gene3D G3DSA:3.10.50.30 108 182 4.5E-28 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SCD_RS11615 667dfee4a132c80750bee19374690d2b 190 PANTHER PTHR30437:SF6 1 189 8.9E-67 T 22-04-2016 SCD_RS11615 667dfee4a132c80750bee19374690d2b 190 PANTHER PTHR30437 1 189 8.9E-67 T 22-04-2016 SCD_RS11615 667dfee4a132c80750bee19374690d2b 190 Hamap MF_00930 Transcription elongation factor GreB [greB]. 26 182 51.414 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 SCD_RS11615 667dfee4a132c80750bee19374690d2b 190 Pfam PF03449 Transcription elongation factor, N-terminal 29 99 7.3E-26 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SCD_RS11615 667dfee4a132c80750bee19374690d2b 190 SUPERFAMILY SSF46557 28 102 2.88E-27 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SCD_RS11615 667dfee4a132c80750bee19374690d2b 190 SUPERFAMILY SSF54534 108 181 1.44E-21 T 22-04-2016 SCD_RS11615 667dfee4a132c80750bee19374690d2b 190 Gene3D G3DSA:1.10.287.180 28 100 5.6E-25 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SCD_RS06985 8d389991dcc4b2532279e543f10673d0 362 Gene3D G3DSA:3.20.20.300 5 291 2.9E-93 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SCD_RS06985 8d389991dcc4b2532279e543f10673d0 362 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 238 255 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 SCD_RS06985 8d389991dcc4b2532279e543f10673d0 362 PANTHER PTHR30480 6 297 6.8E-110 T 22-04-2016 SCD_RS06985 8d389991dcc4b2532279e543f10673d0 362 SUPERFAMILY SSF51445 4 294 1.26E-86 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SCD_RS06985 8d389991dcc4b2532279e543f10673d0 362 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 5 341 52.172 T 22-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 SCD_RS06985 8d389991dcc4b2532279e543f10673d0 362 PANTHER PTHR30480:SF7 6 297 6.8E-110 T 22-04-2016 SCD_RS06985 8d389991dcc4b2532279e543f10673d0 362 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 8 289 2.3E-78 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SCD_RS07030 bc01a778091dbceefea58d122c087a17 351 PANTHER PTHR30469:SF15 1 218 2.2E-29 T 22-04-2016 SCD_RS07030 bc01a778091dbceefea58d122c087a17 351 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 234 3.9E-31 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SCD_RS07030 bc01a778091dbceefea58d122c087a17 351 SUPERFAMILY SSF111369 55 203 8.24E-21 T 22-04-2016 SCD_RS07030 bc01a778091dbceefea58d122c087a17 351 PANTHER PTHR30469 1 218 2.2E-29 T 22-04-2016 SCD_RS07030 bc01a778091dbceefea58d122c087a17 351 Gene3D G3DSA:2.40.50.100 70 100 2.2E-13 T 22-04-2016 SCD_RS07030 bc01a778091dbceefea58d122c087a17 351 Gene3D G3DSA:2.40.50.100 171 205 2.2E-13 T 22-04-2016 SCD_RS07030 bc01a778091dbceefea58d122c087a17 351 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 207 5.1E-8 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SCD_RS05145 7b9a18876b8fa240d6326875a12f025b 440 PANTHER PTHR11374 1 439 8.9E-254 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SCD_RS05145 7b9a18876b8fa240d6326875a12f025b 440 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 420 5.9E-138 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SCD_RS05145 7b9a18876b8fa240d6326875a12f025b 440 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 2.2E-36 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 SCD_RS05145 7b9a18876b8fa240d6326875a12f025b 440 SUPERFAMILY SSF52413 305 435 6.41E-41 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SCD_RS05145 7b9a18876b8fa240d6326875a12f025b 440 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 424 1.7E-30 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SCD_RS05145 7b9a18876b8fa240d6326875a12f025b 440 PIRSF PIRSF000124 1 439 1.2E-151 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SCD_RS05145 7b9a18876b8fa240d6326875a12f025b 440 SUPERFAMILY SSF48179 204 301 6.8E-33 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SCD_RS05145 7b9a18876b8fa240d6326875a12f025b 440 SUPERFAMILY SSF51735 1 195 1.51E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS05145 7b9a18876b8fa240d6326875a12f025b 440 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 186 3.2E-68 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 SCD_RS05145 7b9a18876b8fa240d6326875a12f025b 440 PIRSF PIRSF500134 1 440 1.1E-193 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 SCD_RS05145 7b9a18876b8fa240d6326875a12f025b 440 Gene3D G3DSA:3.40.50.720 235 439 6.6E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS05145 7b9a18876b8fa240d6326875a12f025b 440 SMART SM00984 320 424 1.0E-51 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SCD_RS05145 7b9a18876b8fa240d6326875a12f025b 440 Gene3D G3DSA:3.40.50.720 1 206 1.1E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS05145 7b9a18876b8fa240d6326875a12f025b 440 PANTHER PTHR11374:SF18 1 439 8.9E-254 T 22-04-2016 SCD_RS05145 7b9a18876b8fa240d6326875a12f025b 440 Gene3D G3DSA:1.20.5.100 207 233 5.8E-16 T 22-04-2016 SCD_RS04420 e1ef56416e45ea2e1ff7470b29439be8 506 Gene3D G3DSA:3.40.50.2020 273 443 3.8E-46 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SCD_RS04420 e1ef56416e45ea2e1ff7470b29439be8 506 Pfam PF13522 Glutamine amidotransferase domain 66 210 9.7E-16 T 22-04-2016 SCD_RS04420 e1ef56416e45ea2e1ff7470b29439be8 506 SUPERFAMILY SSF53271 252 484 9.37E-71 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SCD_RS04420 e1ef56416e45ea2e1ff7470b29439be8 506 Gene3D G3DSA:3.60.20.10 2 259 3.0E-60 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SCD_RS04420 e1ef56416e45ea2e1ff7470b29439be8 506 Pfam PF00156 Phosphoribosyl transferase domain 282 395 5.4E-9 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SCD_RS04420 e1ef56416e45ea2e1ff7470b29439be8 506 PIRSF PIRSF000485 1 483 8.1E-160 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SCD_RS04420 e1ef56416e45ea2e1ff7470b29439be8 506 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 2.0E-159 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SCD_RS04420 e1ef56416e45ea2e1ff7470b29439be8 506 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 468 45.244 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SCD_RS04420 e1ef56416e45ea2e1ff7470b29439be8 506 PANTHER PTHR11907:SF4 1 480 1.0E-250 T 22-04-2016 SCD_RS04420 e1ef56416e45ea2e1ff7470b29439be8 506 PANTHER PTHR11907 1 480 1.0E-250 T 22-04-2016 SCD_RS04420 e1ef56416e45ea2e1ff7470b29439be8 506 SUPERFAMILY SSF56235 2 259 2.66E-68 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SCD_RS00900 30d099814b8f8a1d8fabcec34580cb7f 550 Pfam PF08502 LeuA allosteric (dimerisation) domain 420 548 8.5E-24 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SCD_RS00900 30d099814b8f8a1d8fabcec34580cb7f 550 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 241 254 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SCD_RS00900 30d099814b8f8a1d8fabcec34580cb7f 550 Gene3D G3DSA:3.20.20.70 9 391 7.3E-134 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS00900 30d099814b8f8a1d8fabcec34580cb7f 550 SUPERFAMILY SSF51569 20 328 1.28E-94 T 22-04-2016 SCD_RS00900 30d099814b8f8a1d8fabcec34580cb7f 550 Pfam PF00682 HMGL-like 31 303 1.6E-67 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 SCD_RS00900 30d099814b8f8a1d8fabcec34580cb7f 550 SUPERFAMILY SSF89000 386 435 6.28E-13 T 22-04-2016 SCD_RS00900 30d099814b8f8a1d8fabcec34580cb7f 550 SMART SM00917 420 549 1.1E-28 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SCD_RS00900 30d099814b8f8a1d8fabcec34580cb7f 550 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 38 54 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SCD_RS00900 30d099814b8f8a1d8fabcec34580cb7f 550 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 7 548 8.6E-216 T 22-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SCD_RS00900 30d099814b8f8a1d8fabcec34580cb7f 550 PANTHER PTHR10277 8 549 9.5E-241 T 22-04-2016 SCD_RS00900 30d099814b8f8a1d8fabcec34580cb7f 550 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 6 550 50.37 T 22-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SCD_RS00900 30d099814b8f8a1d8fabcec34580cb7f 550 SUPERFAMILY SSF110921 449 548 1.15E-25 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SCD_RS00900 30d099814b8f8a1d8fabcec34580cb7f 550 PANTHER PTHR10277:SF28 8 549 9.5E-241 T 22-04-2016 SCD_RS09790 ebc4247a32b700037370bea386d0ec23 192 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 2.7E-82 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 SCD_RS09790 ebc4247a32b700037370bea386d0ec23 192 PIRSF PIRSF006102 1 192 3.6E-55 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SCD_RS09790 ebc4247a32b700037370bea386d0ec23 192 PANTHER PTHR30335:SF0 2 192 4.1E-111 T 22-04-2016 SCD_RS09790 ebc4247a32b700037370bea386d0ec23 192 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 25.356 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 SCD_RS09790 ebc4247a32b700037370bea386d0ec23 192 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 4.0E-58 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SCD_RS09790 ebc4247a32b700037370bea386d0ec23 192 PANTHER PTHR30335 2 192 4.1E-111 T 22-04-2016 SCD_RS14345 acfe13179e3737134fe12f27631a50c6 333 Gene3D G3DSA:3.30.360.10 157 330 1.1E-10 T 22-04-2016 SCD_RS14345 acfe13179e3737134fe12f27631a50c6 333 SUPERFAMILY SSF51735 13 175 2.09E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS14345 acfe13179e3737134fe12f27631a50c6 333 PANTHER PTHR22604 13 330 1.4E-28 T 22-04-2016 SCD_RS14345 acfe13179e3737134fe12f27631a50c6 333 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 13 145 3.5E-16 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 SCD_RS14345 acfe13179e3737134fe12f27631a50c6 333 Gene3D G3DSA:3.40.50.720 9 156 7.4E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS14345 acfe13179e3737134fe12f27631a50c6 333 SUPERFAMILY SSF55347 150 264 1.63E-5 T 22-04-2016 SCD_RS11320 52484890eed8883f64e2a81cd002d98b 301 Pfam PF00512 His Kinase A (phospho-acceptor) domain 42 142 1.3E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS11320 52484890eed8883f64e2a81cd002d98b 301 PANTHER PTHR24423 4 69 2.9E-90 T 22-04-2016 SCD_RS11320 52484890eed8883f64e2a81cd002d98b 301 PANTHER PTHR24423:SF497 107 294 2.9E-90 T 22-04-2016 SCD_RS11320 52484890eed8883f64e2a81cd002d98b 301 SUPERFAMILY SSF55874 133 293 1.96E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS11320 52484890eed8883f64e2a81cd002d98b 301 Gene3D G3DSA:1.10.287.130 110 130 1.0E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS11320 52484890eed8883f64e2a81cd002d98b 301 Gene3D G3DSA:1.10.287.130 36 67 1.0E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS11320 52484890eed8883f64e2a81cd002d98b 301 PRINTS PR00344 Bacterial sensor protein C-terminal signature 275 288 3.7E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS11320 52484890eed8883f64e2a81cd002d98b 301 PRINTS PR00344 Bacterial sensor protein C-terminal signature 220 234 3.7E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS11320 52484890eed8883f64e2a81cd002d98b 301 PRINTS PR00344 Bacterial sensor protein C-terminal signature 238 248 3.7E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS11320 52484890eed8883f64e2a81cd002d98b 301 PRINTS PR00344 Bacterial sensor protein C-terminal signature 251 269 3.7E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS11320 52484890eed8883f64e2a81cd002d98b 301 PANTHER PTHR24423:SF497 4 69 2.9E-90 T 22-04-2016 SCD_RS11320 52484890eed8883f64e2a81cd002d98b 301 PANTHER PTHR24423 107 294 2.9E-90 T 22-04-2016 SCD_RS11320 52484890eed8883f64e2a81cd002d98b 301 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 186 290 2.4E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS11320 52484890eed8883f64e2a81cd002d98b 301 SUPERFAMILY SSF47384 111 138 1.41E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS11320 52484890eed8883f64e2a81cd002d98b 301 SUPERFAMILY SSF47384 25 76 1.41E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS11320 52484890eed8883f64e2a81cd002d98b 301 SMART SM00387 183 291 3.5E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS11320 52484890eed8883f64e2a81cd002d98b 301 Gene3D G3DSA:3.30.565.10 131 291 6.0E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 SUPERFAMILY SSF47384 296 377 2.16E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 Gene3D G3DSA:3.40.50.2300 558 679 1.7E-31 T 22-04-2016 SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 SMART SM00448 559 673 3.6E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 Pfam PF00512 His Kinase A (phospho-acceptor) domain 309 376 2.2E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 SUPERFAMILY SSF55874 365 530 4.71E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 SUPERFAMILY SSF55785 7 147 3.44E-17 T 22-04-2016 IPR000014 PAS domain SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 SMART SM00388 309 376 1.4E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 Gene3D G3DSA:3.30.450.20 172 315 7.4E-24 T 22-04-2016 SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 SUPERFAMILY SSF55785 157 280 1.29E-22 T 22-04-2016 IPR000014 PAS domain SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 155 7.2E-11 T 22-04-2016 IPR000014 PAS domain SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 173 288 7.3E-22 T 22-04-2016 IPR000014 PAS domain SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 SMART SM00387 422 534 2.0E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 512 3.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 531 3.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 474 3.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 488 3.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 Gene3D G3DSA:3.30.450.20 7 147 7.5E-21 T 22-04-2016 SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 PANTHER PTHR24423 5 103 2.2E-143 T 22-04-2016 SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 PANTHER PTHR24423 119 674 2.2E-143 T 22-04-2016 SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 SMART SM00086 240 282 0.016 T 22-04-2016 IPR001610 PAC motif SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 SMART SM00086 109 151 1.1E-5 T 22-04-2016 IPR001610 PAC motif SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 423 530 1.5E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 Gene3D G3DSA:3.30.565.10 377 530 9.0E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 SUPERFAMILY SSF52172 558 679 4.84E-32 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 Pfam PF00072 Response regulator receiver domain 562 673 7.6E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 Pfam PF08448 PAS fold 181 284 1.8E-14 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 SMART SM00091 170 236 9.3E-5 T 22-04-2016 IPR000014 PAS domain SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 SMART SM00091 21 89 6.1E-5 T 22-04-2016 IPR000014 PAS domain SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 Gene3D G3DSA:1.10.287.130 316 371 3.0E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS03580 e193ab1eef431b16f17785c0de380c80 693 Pfam PF00989 PAS fold 24 147 3.5E-11 T 22-04-2016 IPR013767 PAS fold GO:0006355 SCD_RS03865 225636f79529239f7650bd8a5fbf0ddf 725 Pfam PF00989 PAS fold 147 224 1.3E-7 T 22-04-2016 IPR013767 PAS fold GO:0006355 SCD_RS03865 225636f79529239f7650bd8a5fbf0ddf 725 SMART SM00091 145 211 6.2E-11 T 22-04-2016 IPR000014 PAS domain SCD_RS03865 225636f79529239f7650bd8a5fbf0ddf 725 Pfam PF00072 Response regulator receiver domain 11 120 3.2E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS03865 225636f79529239f7650bd8a5fbf0ddf 725 Gene3D G3DSA:3.30.450.20 135 264 3.0E-19 T 22-04-2016 SCD_RS03865 225636f79529239f7650bd8a5fbf0ddf 725 PANTHER PTHR10799 70 221 2.2E-88 T 22-04-2016 SCD_RS03865 225636f79529239f7650bd8a5fbf0ddf 725 PANTHER PTHR10799 310 548 2.2E-88 T 22-04-2016 SCD_RS03865 225636f79529239f7650bd8a5fbf0ddf 725 SMART SM00448 9 120 5.6E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS03865 225636f79529239f7650bd8a5fbf0ddf 725 SUPERFAMILY SSF141868 455 701 1.57E-87 T 22-04-2016 IPR001633 EAL domain SCD_RS03865 225636f79529239f7650bd8a5fbf0ddf 725 Pfam PF00563 EAL domain 455 689 2.8E-72 T 22-04-2016 IPR001633 EAL domain SCD_RS03865 225636f79529239f7650bd8a5fbf0ddf 725 SMART SM00052 448 694 1.0E-115 T 22-04-2016 IPR001633 EAL domain SCD_RS03865 225636f79529239f7650bd8a5fbf0ddf 725 SUPERFAMILY SSF55073 282 439 1.73E-53 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS03865 225636f79529239f7650bd8a5fbf0ddf 725 SUPERFAMILY SSF52172 9 162 1.71E-36 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS03865 225636f79529239f7650bd8a5fbf0ddf 725 Gene3D G3DSA:3.20.20.450 452 701 6.5E-95 T 22-04-2016 IPR001633 EAL domain SCD_RS03865 225636f79529239f7650bd8a5fbf0ddf 725 PANTHER PTHR10799:SF774 70 221 2.2E-88 T 22-04-2016 SCD_RS03865 225636f79529239f7650bd8a5fbf0ddf 725 PANTHER PTHR10799:SF774 310 548 2.2E-88 T 22-04-2016 SCD_RS03865 225636f79529239f7650bd8a5fbf0ddf 725 SMART SM00267 266 438 1.0E-69 T 22-04-2016 IPR000160 GGDEF domain SCD_RS03865 225636f79529239f7650bd8a5fbf0ddf 725 Pfam PF00990 Diguanylate cyclase, GGDEF domain 277 434 1.4E-53 T 22-04-2016 IPR000160 GGDEF domain SCD_RS03865 225636f79529239f7650bd8a5fbf0ddf 725 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 275 437 4.9E-44 T 22-04-2016 IPR000160 GGDEF domain SCD_RS03865 225636f79529239f7650bd8a5fbf0ddf 725 SUPERFAMILY SSF55785 132 241 1.54E-16 T 22-04-2016 IPR000014 PAS domain SCD_RS03865 225636f79529239f7650bd8a5fbf0ddf 725 Gene3D G3DSA:3.40.50.2300 8 134 3.3E-32 T 22-04-2016 SCD_RS03865 225636f79529239f7650bd8a5fbf0ddf 725 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 142 271 4.9E-17 T 22-04-2016 IPR000014 PAS domain SCD_RS03865 225636f79529239f7650bd8a5fbf0ddf 725 Gene3D G3DSA:3.30.70.270 278 443 2.4E-61 T 22-04-2016 SCD_RS06560 e626eab30a719997203aa8308468dd4f 314 Gene3D G3DSA:1.10.40.60 215 265 7.0E-6 T 22-04-2016 SCD_RS06560 e626eab30a719997203aa8308468dd4f 314 Gene3D G3DSA:3.30.1300.30 35 106 5.9E-13 T 22-04-2016 SCD_RS06560 e626eab30a719997203aa8308468dd4f 314 Gene3D G3DSA:3.30.1300.30 276 313 5.9E-13 T 22-04-2016 SCD_RS06560 e626eab30a719997203aa8308468dd4f 314 SUPERFAMILY SSF158544 109 212 3.14E-27 T 22-04-2016 SCD_RS06560 e626eab30a719997203aa8308468dd4f 314 PIRSF PIRSF002786 8 314 1.7E-93 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 SCD_RS06560 e626eab30a719997203aa8308468dd4f 314 SUPERFAMILY SSF54523 275 312 1.94E-16 T 22-04-2016 SCD_RS06560 e626eab30a719997203aa8308468dd4f 314 SUPERFAMILY SSF54523 45 108 1.94E-16 T 22-04-2016 SCD_RS06560 e626eab30a719997203aa8308468dd4f 314 Gene3D G3DSA:1.10.40.60 107 211 8.4E-29 T 22-04-2016 SCD_RS06560 e626eab30a719997203aa8308468dd4f 314 PANTHER PTHR38831 11 269 7.8E-28 T 22-04-2016 SCD_RS06560 e626eab30a719997203aa8308468dd4f 314 PANTHER PTHR38831:SF1 11 269 7.8E-28 T 22-04-2016 SCD_RS06560 e626eab30a719997203aa8308468dd4f 314 Pfam PF03934 Type II secretion system (T2SS), protein K 38 305 3.6E-89 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 SCD_RS01605 189d9662992e4338cc8c106a4c538c5f 380 SUPERFAMILY SSF110738 3 367 6.15E-107 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SCD_RS01605 189d9662992e4338cc8c106a4c538c5f 380 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 3 369 3.9E-107 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SCD_RS01605 189d9662992e4338cc8c106a4c538c5f 380 PANTHER PTHR21599 3 366 1.3E-105 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SCD_RS01605 189d9662992e4338cc8c106a4c538c5f 380 PANTHER PTHR21599:SF0 3 366 1.3E-105 T 22-04-2016 SCD_RS01605 189d9662992e4338cc8c106a4c538c5f 380 Pfam PF02595 Glycerate kinase family 3 367 5.2E-118 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SCD_RS01605 189d9662992e4338cc8c106a4c538c5f 380 Gene3D G3DSA:3.90.1510.10 42 273 1.1E-72 T 22-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 SCD_RS01605 189d9662992e4338cc8c106a4c538c5f 380 PIRSF PIRSF006078 1 375 9.5E-106 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 SUPERFAMILY SSF50249 199 284 2.22E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 SUPERFAMILY SSF50249 265 365 6.36E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 Pfam PF00575 S1 RNA binding domain 460 530 2.3E-16 T 22-04-2016 IPR003029 S1 domain GO:0003676 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 Pfam PF00575 S1 RNA binding domain 113 181 2.6E-9 T 22-04-2016 IPR003029 S1 domain GO:0003676 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 Pfam PF00575 S1 RNA binding domain 291 357 7.3E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 Pfam PF00575 S1 RNA binding domain 371 444 1.3E-19 T 22-04-2016 IPR003029 S1 domain GO:0003676 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 Pfam PF00575 S1 RNA binding domain 200 270 1.2E-22 T 22-04-2016 IPR003029 S1 domain GO:0003676 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 Pfam PF00575 S1 RNA binding domain 29 95 1.6E-5 T 22-04-2016 IPR003029 S1 domain GO:0003676 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 PANTHER PTHR10724:SF6 12 524 4.3E-245 T 22-04-2016 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 13 530 1.8E-205 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 SUPERFAMILY SSF50249 16 122 1.72E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 Gene3D G3DSA:2.40.50.140 375 452 9.4E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 SUPERFAMILY SSF50249 112 193 1.79E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 Gene3D G3DSA:2.40.50.140 195 272 4.3E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 Gene3D G3DSA:2.40.50.140 111 183 5.2E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 Gene3D G3DSA:2.40.50.140 454 531 2.6E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 PIRSF PIRSF002111 2 544 9.7E-213 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 SUPERFAMILY SSF50249 372 453 2.36E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 SUPERFAMILY SSF50249 439 544 5.97E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 Gene3D G3DSA:2.40.50.140 292 374 4.6E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 Gene3D G3DSA:2.40.50.140 31 110 5.7E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 SMART SM00316 285 357 3.0E-23 T 22-04-2016 IPR022967 RNA-binding domain, S1 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 SMART SM00316 459 530 1.2E-21 T 22-04-2016 IPR022967 RNA-binding domain, S1 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 SMART SM00316 113 181 3.0E-7 T 22-04-2016 IPR022967 RNA-binding domain, S1 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 SMART SM00316 200 270 1.2E-29 T 22-04-2016 IPR022967 RNA-binding domain, S1 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 SMART SM00316 372 444 2.0E-21 T 22-04-2016 IPR022967 RNA-binding domain, S1 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 SMART SM00316 29 97 0.02 T 22-04-2016 IPR022967 RNA-binding domain, S1 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 PRINTS PR00681 Ribosomal protein S1 signature 300 319 1.2E-82 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 PRINTS PR00681 Ribosomal protein S1 signature 31 49 1.2E-82 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 PRINTS PR00681 Ribosomal protein S1 signature 222 243 1.2E-82 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 PRINTS PR00681 Ribosomal protein S1 signature 340 358 1.2E-82 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 PRINTS PR00681 Ribosomal protein S1 signature 118 134 1.2E-82 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 PRINTS PR00681 Ribosomal protein S1 signature 49 63 1.2E-82 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 PRINTS PR00681 Ribosomal protein S1 signature 136 153 1.2E-82 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 PRINTS PR00681 Ribosomal protein S1 signature 165 185 1.2E-82 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 PRINTS PR00681 Ribosomal protein S1 signature 94 113 1.2E-82 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SCD_RS05120 905589923bc6f8fa67b594eebd514d5b 572 PANTHER PTHR10724 12 524 4.3E-245 T 22-04-2016 SCD_RS07450 17233fdee52cf656c76263da28ad819b 329 PANTHER PTHR11695 18 328 2.2E-138 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SCD_RS07450 17233fdee52cf656c76263da28ad819b 329 PANTHER PTHR11695:SF13 18 328 2.2E-138 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI SCD_RS07450 17233fdee52cf656c76263da28ad819b 329 Gene3D G3DSA:3.90.180.10 19 142 6.0E-10 T 22-04-2016 IPR011032 GroES-like SCD_RS07450 17233fdee52cf656c76263da28ad819b 329 SMART SM00829 14 325 7.0E-6 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SCD_RS07450 17233fdee52cf656c76263da28ad819b 329 SUPERFAMILY SSF50129 5 146 7.0E-40 T 22-04-2016 IPR011032 GroES-like SCD_RS07450 17233fdee52cf656c76263da28ad819b 329 Gene3D G3DSA:3.40.50.720 143 295 1.2E-71 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS07450 17233fdee52cf656c76263da28ad819b 329 Pfam PF00107 Zinc-binding dehydrogenase 161 271 1.1E-13 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SCD_RS07450 17233fdee52cf656c76263da28ad819b 329 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 6 327 7.4E-138 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI SCD_RS07450 17233fdee52cf656c76263da28ad819b 329 SUPERFAMILY SSF51735 119 295 1.45E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS01780 f4af28b07b399b11dcd20cafbe5a3508 441 Gene3D G3DSA:3.30.300.30 341 436 8.7E-23 T 22-04-2016 SCD_RS01780 f4af28b07b399b11dcd20cafbe5a3508 441 PANTHER PTHR24096:SF179 109 434 1.2E-79 T 22-04-2016 SCD_RS01780 f4af28b07b399b11dcd20cafbe5a3508 441 PANTHER PTHR24096:SF179 17 23 1.2E-79 T 22-04-2016 SCD_RS01780 f4af28b07b399b11dcd20cafbe5a3508 441 PANTHER PTHR24096 109 434 1.2E-79 T 22-04-2016 SCD_RS01780 f4af28b07b399b11dcd20cafbe5a3508 441 PANTHER PTHR24096 17 23 1.2E-79 T 22-04-2016 SCD_RS01780 f4af28b07b399b11dcd20cafbe5a3508 441 Gene3D G3DSA:3.40.50.980 5 94 8.6E-8 T 22-04-2016 SCD_RS01780 f4af28b07b399b11dcd20cafbe5a3508 441 Gene3D G3DSA:2.30.38.10 268 339 1.4E-14 T 22-04-2016 SCD_RS01780 f4af28b07b399b11dcd20cafbe5a3508 441 Gene3D G3DSA:3.40.50.980 106 254 3.3E-29 T 22-04-2016 SCD_RS01780 f4af28b07b399b11dcd20cafbe5a3508 441 Pfam PF00501 AMP-binding enzyme 105 346 2.8E-50 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SCD_RS01780 f4af28b07b399b11dcd20cafbe5a3508 441 Pfam PF00501 AMP-binding enzyme 10 94 6.9E-8 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SCD_RS01780 f4af28b07b399b11dcd20cafbe5a3508 441 SUPERFAMILY SSF56801 2 437 4.97E-102 T 22-04-2016 SCD_RS01780 f4af28b07b399b11dcd20cafbe5a3508 441 Pfam PF13193 AMP-binding enzyme C-terminal domain 356 426 3.9E-12 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SCD_RS03440 32e6446c5525a342051562599a632ee8 195 PANTHER PTHR19136 5 192 3.8E-39 T 22-04-2016 SCD_RS03440 32e6446c5525a342051562599a632ee8 195 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 8 189 2.2E-64 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 SCD_RS03440 32e6446c5525a342051562599a632ee8 195 PANTHER PTHR19136:SF81 5 192 3.8E-39 T 22-04-2016 SCD_RS03440 32e6446c5525a342051562599a632ee8 195 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 6 192 27.395 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 SCD_RS03440 32e6446c5525a342051562599a632ee8 195 SUPERFAMILY SSF53448 7 189 1.87E-33 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS03440 32e6446c5525a342051562599a632ee8 195 Pfam PF12804 MobA-like NTP transferase domain 10 162 1.6E-33 T 22-04-2016 IPR025877 MobA-like NTP transferase SCD_RS03440 32e6446c5525a342051562599a632ee8 195 Gene3D G3DSA:3.90.550.10 5 192 2.1E-52 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS07810 5e76204292be5d23048d27f9cd50c5e9 196 PRINTS PR00344 Bacterial sensor protein C-terminal signature 114 128 1.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS07810 5e76204292be5d23048d27f9cd50c5e9 196 PRINTS PR00344 Bacterial sensor protein C-terminal signature 132 142 1.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS07810 5e76204292be5d23048d27f9cd50c5e9 196 PRINTS PR00344 Bacterial sensor protein C-terminal signature 148 166 1.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS07810 5e76204292be5d23048d27f9cd50c5e9 196 PRINTS PR00344 Bacterial sensor protein C-terminal signature 172 185 1.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS07810 5e76204292be5d23048d27f9cd50c5e9 196 SUPERFAMILY SSF55874 21 188 3.01E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS07810 5e76204292be5d23048d27f9cd50c5e9 196 SMART SM00387 77 188 2.3E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS07810 5e76204292be5d23048d27f9cd50c5e9 196 PANTHER PTHR24423 3 185 1.2E-54 T 22-04-2016 SCD_RS07810 5e76204292be5d23048d27f9cd50c5e9 196 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 78 186 2.2E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS07810 5e76204292be5d23048d27f9cd50c5e9 196 Gene3D G3DSA:3.30.565.10 7 187 3.1E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS00360 e1a1a31d54c0e88d368d20c7d4506085 229 Pfam PF01168 Alanine racemase, N-terminal domain 8 226 6.9E-31 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SCD_RS00360 e1a1a31d54c0e88d368d20c7d4506085 229 SUPERFAMILY SSF51419 2 224 1.13E-79 T 22-04-2016 IPR029066 PLP-binding barrel SCD_RS00360 e1a1a31d54c0e88d368d20c7d4506085 229 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 76 90 - T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 SCD_RS00360 e1a1a31d54c0e88d368d20c7d4506085 229 Gene3D G3DSA:3.20.20.10 1 227 1.0E-92 T 22-04-2016 IPR029066 PLP-binding barrel SCD_RS00360 e1a1a31d54c0e88d368d20c7d4506085 229 PANTHER PTHR10146 6 227 3.7E-102 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 SCD_RS00360 e1a1a31d54c0e88d368d20c7d4506085 229 PIRSF PIRSF004848 1 229 4.0E-74 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 SCD_RS00360 e1a1a31d54c0e88d368d20c7d4506085 229 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 226 3.9E-77 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 SCD_RS02340 eac014cbfc5a7067f1822cffb48ecc1e 453 SMART SM00387 341 452 7.7E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS02340 eac014cbfc5a7067f1822cffb48ecc1e 453 PANTHER PTHR24423 118 133 4.1E-67 T 22-04-2016 SCD_RS02340 eac014cbfc5a7067f1822cffb48ecc1e 453 PANTHER PTHR24423 169 449 4.1E-67 T 22-04-2016 SCD_RS02340 eac014cbfc5a7067f1822cffb48ecc1e 453 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 449 2.3E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS02340 eac014cbfc5a7067f1822cffb48ecc1e 453 SMART SM00388 231 296 2.1E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS02340 eac014cbfc5a7067f1822cffb48ecc1e 453 Pfam PF08521 Two-component sensor kinase N-terminal 22 154 2.6E-9 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal SCD_RS02340 eac014cbfc5a7067f1822cffb48ecc1e 453 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 295 1.1E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS02340 eac014cbfc5a7067f1822cffb48ecc1e 453 PANTHER PTHR24423:SF474 118 133 4.1E-67 T 22-04-2016 SCD_RS02340 eac014cbfc5a7067f1822cffb48ecc1e 453 PANTHER PTHR24423:SF474 169 449 4.1E-67 T 22-04-2016 SCD_RS02340 eac014cbfc5a7067f1822cffb48ecc1e 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 7.7E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS02340 eac014cbfc5a7067f1822cffb48ecc1e 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 429 7.7E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS02340 eac014cbfc5a7067f1822cffb48ecc1e 453 Gene3D G3DSA:1.10.287.130 223 292 9.0E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS02340 eac014cbfc5a7067f1822cffb48ecc1e 453 SUPERFAMILY SSF55874 286 449 3.93E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS02340 eac014cbfc5a7067f1822cffb48ecc1e 453 SUPERFAMILY SSF47384 215 294 3.14E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS02340 eac014cbfc5a7067f1822cffb48ecc1e 453 Gene3D G3DSA:3.30.565.10 303 450 7.6E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15750 b7c3812226c80eb198a46f542411168d 879 SUPERFAMILY SSF141868 629 873 2.09E-74 T 22-04-2016 IPR001633 EAL domain SCD_RS15750 b7c3812226c80eb198a46f542411168d 879 SUPERFAMILY SSF55785 312 437 1.03E-10 T 22-04-2016 IPR000014 PAS domain SCD_RS15750 b7c3812226c80eb198a46f542411168d 879 Gene3D G3DSA:3.30.450.20 314 437 2.7E-10 T 22-04-2016 SCD_RS15750 b7c3812226c80eb198a46f542411168d 879 SMART SM00065 40 196 6.5E-4 T 22-04-2016 IPR003018 GAF domain GO:0005515 SCD_RS15750 b7c3812226c80eb198a46f542411168d 879 SMART SM00052 622 866 1.5E-85 T 22-04-2016 IPR001633 EAL domain SCD_RS15750 b7c3812226c80eb198a46f542411168d 879 SUPERFAMILY SSF55785 188 307 9.6E-6 T 22-04-2016 IPR000014 PAS domain SCD_RS15750 b7c3812226c80eb198a46f542411168d 879 SUPERFAMILY SSF55781 43 188 3.05E-12 T 22-04-2016 IPR029016 GAF domain-like SCD_RS15750 b7c3812226c80eb198a46f542411168d 879 Pfam PF00990 Diguanylate cyclase, GGDEF domain 450 607 5.0E-48 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15750 b7c3812226c80eb198a46f542411168d 879 Pfam PF00563 EAL domain 629 860 1.5E-65 T 22-04-2016 IPR001633 EAL domain SCD_RS15750 b7c3812226c80eb198a46f542411168d 879 PANTHER PTHR33121 621 864 3.1E-61 T 22-04-2016 SCD_RS15750 b7c3812226c80eb198a46f542411168d 879 Pfam PF00989 PAS fold 319 436 8.4E-6 T 22-04-2016 IPR013767 PAS fold GO:0006355 SCD_RS15750 b7c3812226c80eb198a46f542411168d 879 PANTHER PTHR33121:SF16 621 864 3.1E-61 T 22-04-2016 SCD_RS15750 b7c3812226c80eb198a46f542411168d 879 SMART SM00267 439 611 3.2E-65 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15750 b7c3812226c80eb198a46f542411168d 879 Gene3D G3DSA:3.30.450.20 194 312 5.9E-6 T 22-04-2016 SCD_RS15750 b7c3812226c80eb198a46f542411168d 879 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 448 610 3.3E-44 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15750 b7c3812226c80eb198a46f542411168d 879 SUPERFAMILY SSF55073 455 612 1.02E-50 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS15750 b7c3812226c80eb198a46f542411168d 879 Gene3D G3DSA:3.30.70.270 452 613 5.5E-58 T 22-04-2016 SCD_RS15750 b7c3812226c80eb198a46f542411168d 879 Gene3D G3DSA:3.30.450.40 41 193 8.6E-14 T 22-04-2016 IPR029016 GAF domain-like SCD_RS15750 b7c3812226c80eb198a46f542411168d 879 Pfam PF01590 GAF domain 45 186 2.8E-7 T 22-04-2016 IPR003018 GAF domain GO:0005515 SCD_RS15750 b7c3812226c80eb198a46f542411168d 879 Gene3D G3DSA:3.20.20.450 625 874 7.0E-82 T 22-04-2016 IPR001633 EAL domain SCD_RS14785 726dbd41bca45f3784d5620627e0ab1e 520 Gene3D G3DSA:2.40.30.10 218 317 1.1E-6 T 22-04-2016 SCD_RS14785 726dbd41bca45f3784d5620627e0ab1e 520 PANTHER PTHR11055 347 513 1.4E-113 T 22-04-2016 SCD_RS14785 726dbd41bca45f3784d5620627e0ab1e 520 SUPERFAMILY SSF50465 218 318 6.71E-27 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SCD_RS14785 726dbd41bca45f3784d5620627e0ab1e 520 Gene3D G3DSA:3.40.50.300 327 516 1.5E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14785 726dbd41bca45f3784d5620627e0ab1e 520 SUPERFAMILY SSF52540 19 200 5.5E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14785 726dbd41bca45f3784d5620627e0ab1e 520 Gene3D G3DSA:3.40.50.300 95 201 7.4E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14785 726dbd41bca45f3784d5620627e0ab1e 520 SUPERFAMILY SSF52540 347 516 1.56E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14785 726dbd41bca45f3784d5620627e0ab1e 520 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 347 519 38.689 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 SCD_RS14785 726dbd41bca45f3784d5620627e0ab1e 520 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 333 514 1.6E-76 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 SCD_RS14785 726dbd41bca45f3784d5620627e0ab1e 520 Pfam PF00009 Elongation factor Tu GTP binding domain 93 178 1.0E-10 T 22-04-2016 SCD_RS14785 726dbd41bca45f3784d5620627e0ab1e 520 Pfam PF01583 Adenylylsulphate kinase 348 501 1.0E-71 T 22-04-2016 SCD_RS14415 a5e9c20e4bd39ab451e65f265cd772ec 356 Pfam PF16363 GDP-mannose 4,6 dehydratase 3 323 5.7E-99 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS14415 a5e9c20e4bd39ab451e65f265cd772ec 356 PANTHER PTHR10366:SF41 1 350 4.6E-167 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SCD_RS14415 a5e9c20e4bd39ab451e65f265cd772ec 356 Gene3D G3DSA:3.40.50.720 2 190 5.0E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS14415 a5e9c20e4bd39ab451e65f265cd772ec 356 PANTHER PTHR10366 1 350 4.6E-167 T 22-04-2016 SCD_RS14415 a5e9c20e4bd39ab451e65f265cd772ec 356 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 337 6.9E-152 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SCD_RS14415 a5e9c20e4bd39ab451e65f265cd772ec 356 SUPERFAMILY SSF51735 2 350 1.08E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS14415 a5e9c20e4bd39ab451e65f265cd772ec 356 Gene3D G3DSA:3.90.25.10 191 347 5.2E-55 T 22-04-2016 SCD_RS04145 9574a2bd45c8f6bc1425de1e2b17ff12 186 Pfam PF00994 Probable molybdopterin binding domain 11 150 3.2E-29 T 22-04-2016 IPR001453 MoaB/Mog domain SCD_RS04145 9574a2bd45c8f6bc1425de1e2b17ff12 186 PANTHER PTHR10192 1 186 1.3E-87 T 22-04-2016 SCD_RS04145 9574a2bd45c8f6bc1425de1e2b17ff12 186 SUPERFAMILY SSF53218 8 179 4.71E-46 T 22-04-2016 IPR001453 MoaB/Mog domain SCD_RS04145 9574a2bd45c8f6bc1425de1e2b17ff12 186 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 SCD_RS04145 9574a2bd45c8f6bc1425de1e2b17ff12 186 Gene3D G3DSA:3.40.980.10 9 170 8.9E-54 T 22-04-2016 IPR001453 MoaB/Mog domain SCD_RS04145 9574a2bd45c8f6bc1425de1e2b17ff12 186 SMART SM00852 10 156 2.5E-23 T 22-04-2016 IPR001453 MoaB/Mog domain SCD_RS04145 9574a2bd45c8f6bc1425de1e2b17ff12 186 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 9 149 4.7E-37 T 22-04-2016 IPR001453 MoaB/Mog domain SCD_RS08545 814013cd0076d1e3757472b4ced88ab3 155 TIGRFAM TIGR02060 aprB: adenylylsulfate reductase, beta subunit 1 128 2.7E-60 T 22-04-2016 IPR011802 Adenylylsulphate reductase, beta subunit SCD_RS08545 814013cd0076d1e3757472b4ced88ab3 155 PANTHER PTHR24960 1 105 1.8E-44 T 22-04-2016 SCD_RS08545 814013cd0076d1e3757472b4ced88ab3 155 PANTHER PTHR24960:SF53 1 105 1.8E-44 T 22-04-2016 SCD_RS08545 814013cd0076d1e3757472b4ced88ab3 155 Pfam PF12139 Adenosine-5'-phosphosulfate reductase beta subunit 70 139 1.7E-26 T 22-04-2016 IPR022738 Adenylylsulphate reductase, beta subunit, C-terminal SCD_RS08545 814013cd0076d1e3757472b4ced88ab3 155 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 53 64 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS08545 814013cd0076d1e3757472b4ced88ab3 155 SUPERFAMILY SSF54862 4 130 5.16E-23 T 22-04-2016 SCD_RS08545 814013cd0076d1e3757472b4ced88ab3 155 Pfam PF13187 4Fe-4S dicluster domain 9 68 2.7E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS08545 814013cd0076d1e3757472b4ced88ab3 155 Gene3D G3DSA:3.30.70.20 4 71 1.7E-14 T 22-04-2016 SCD_RS04605 a67b84569894aedbecdd534452cda63d 452 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 264 372 1.7E-31 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS04605 a67b84569894aedbecdd534452cda63d 452 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 450 47.485 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS04605 a67b84569894aedbecdd534452cda63d 452 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 163 260 1.6E-21 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS04605 a67b84569894aedbecdd534452cda63d 452 PANTHER PTHR22573 3 452 1.6E-166 T 22-04-2016 SCD_RS04605 a67b84569894aedbecdd534452cda63d 452 Gene3D G3DSA:3.40.120.10 257 373 2.5E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS04605 a67b84569894aedbecdd534452cda63d 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 101 115 1.1E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS04605 a67b84569894aedbecdd534452cda63d 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 240 255 1.1E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS04605 a67b84569894aedbecdd534452cda63d 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 1.1E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS04605 a67b84569894aedbecdd534452cda63d 452 SUPERFAMILY SSF53738 264 372 6.28E-29 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS04605 a67b84569894aedbecdd534452cda63d 452 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 142 2.7E-44 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS04605 a67b84569894aedbecdd534452cda63d 452 SUPERFAMILY SSF53738 162 262 3.92E-33 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS04605 a67b84569894aedbecdd534452cda63d 452 Gene3D G3DSA:3.40.120.10 3 158 1.5E-49 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS04605 a67b84569894aedbecdd534452cda63d 452 SUPERFAMILY SSF53738 2 187 3.77E-50 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS04605 a67b84569894aedbecdd534452cda63d 452 Gene3D G3DSA:3.40.120.10 182 256 8.8E-29 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS04605 a67b84569894aedbecdd534452cda63d 452 PANTHER PTHR22573:SF15 3 452 1.6E-166 T 22-04-2016 SCD_RS04605 a67b84569894aedbecdd534452cda63d 452 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 102 111 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS04605 a67b84569894aedbecdd534452cda63d 452 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 392 447 3.8E-11 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS04605 a67b84569894aedbecdd534452cda63d 452 Gene3D G3DSA:3.30.310.50 375 449 8.4E-19 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS04605 a67b84569894aedbecdd534452cda63d 452 SUPERFAMILY SSF55957 364 451 1.7E-19 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS04605 a67b84569894aedbecdd534452cda63d 452 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 448 1.7E-188 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS07370 5fa36794de8dcd0b4940e4c9db80e5f0 434 Gene3D G3DSA:3.40.630.10 227 432 1.3E-109 T 22-04-2016 SCD_RS07370 5fa36794de8dcd0b4940e4c9db80e5f0 434 Gene3D G3DSA:3.40.630.10 10 91 1.3E-109 T 22-04-2016 SCD_RS07370 5fa36794de8dcd0b4940e4c9db80e5f0 434 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 310 326 9.1E-43 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 SCD_RS07370 5fa36794de8dcd0b4940e4c9db80e5f0 434 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 399 414 9.1E-43 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 SCD_RS07370 5fa36794de8dcd0b4940e4c9db80e5f0 434 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 81 97 9.1E-43 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 SCD_RS07370 5fa36794de8dcd0b4940e4c9db80e5f0 434 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 267 285 9.1E-43 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 SCD_RS07370 5fa36794de8dcd0b4940e4c9db80e5f0 434 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 114 134 9.1E-43 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 SCD_RS07370 5fa36794de8dcd0b4940e4c9db80e5f0 434 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 149 166 9.1E-43 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 SCD_RS07370 5fa36794de8dcd0b4940e4c9db80e5f0 434 PANTHER PTHR28570 11 428 8.5E-175 T 22-04-2016 SCD_RS07370 5fa36794de8dcd0b4940e4c9db80e5f0 434 Gene3D G3DSA:2.30.250.10 92 225 5.0E-38 T 22-04-2016 IPR023358 Peptidase M18, domain 2 GO:0004177 SCD_RS07370 5fa36794de8dcd0b4940e4c9db80e5f0 434 SUPERFAMILY SSF101821 93 217 6.59E-28 T 22-04-2016 SCD_RS07370 5fa36794de8dcd0b4940e4c9db80e5f0 434 SUPERFAMILY SSF53187 10 92 7.96E-102 T 22-04-2016 SCD_RS07370 5fa36794de8dcd0b4940e4c9db80e5f0 434 SUPERFAMILY SSF53187 218 432 7.96E-102 T 22-04-2016 SCD_RS07370 5fa36794de8dcd0b4940e4c9db80e5f0 434 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 17 429 4.8E-130 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 SCD_RS09280 a0f326b1d4febed21f371fa6d9b446ae 448 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SCD_RS09280 a0f326b1d4febed21f371fa6d9b446ae 448 Pfam PF16325 Peptidase family U32 C-terminal domain 366 446 4.2E-17 T 22-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SCD_RS09280 a0f326b1d4febed21f371fa6d9b446ae 448 PANTHER PTHR30217:SF6 1 207 5.5E-199 T 22-04-2016 SCD_RS09280 a0f326b1d4febed21f371fa6d9b446ae 448 PANTHER PTHR30217:SF6 253 440 5.5E-199 T 22-04-2016 SCD_RS09280 a0f326b1d4febed21f371fa6d9b446ae 448 Pfam PF01136 Peptidase family U32 76 350 6.4E-97 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SCD_RS09280 a0f326b1d4febed21f371fa6d9b446ae 448 PANTHER PTHR30217 1 207 5.5E-199 T 22-04-2016 SCD_RS09280 a0f326b1d4febed21f371fa6d9b446ae 448 PANTHER PTHR30217 253 440 5.5E-199 T 22-04-2016 SCD_RS04750 5ab1e806975fe2182aec4cf2d6d59582 97 PANTHER PTHR34477:SF1 1 81 1.1E-28 T 22-04-2016 SCD_RS04750 5ab1e806975fe2182aec4cf2d6d59582 97 SUPERFAMILY SSF82771 2 73 1.57E-14 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SCD_RS04750 5ab1e806975fe2182aec4cf2d6d59582 97 Pfam PF01541 GIY-YIG catalytic domain 4 74 6.0E-17 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SCD_RS04750 5ab1e806975fe2182aec4cf2d6d59582 97 PANTHER PTHR34477 1 81 1.1E-28 T 22-04-2016 SCD_RS12380 cfe90bd7a5c970bbe64780a15a54de4b 163 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 31 94 2.2E-13 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SCD_RS12380 cfe90bd7a5c970bbe64780a15a54de4b 163 PANTHER PTHR10739:SF26 31 163 6.9E-35 T 22-04-2016 SCD_RS12380 cfe90bd7a5c970bbe64780a15a54de4b 163 Pfam PF01467 Cytidylyltransferase-like 33 132 3.5E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SCD_RS12380 cfe90bd7a5c970bbe64780a15a54de4b 163 SUPERFAMILY SSF52374 30 154 9.78E-21 T 22-04-2016 SCD_RS12380 cfe90bd7a5c970bbe64780a15a54de4b 163 PANTHER PTHR10739 31 163 6.9E-35 T 22-04-2016 SCD_RS12380 cfe90bd7a5c970bbe64780a15a54de4b 163 Gene3D G3DSA:3.40.50.620 30 147 5.2E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS12380 cfe90bd7a5c970bbe64780a15a54de4b 163 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 20 161 1.5E-56 T 22-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 SCD_RS01970 fcc1deee23b9800b24f7cb19bc20ad42 314 Gene3D G3DSA:3.40.50.720 4 230 4.4E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS01970 fcc1deee23b9800b24f7cb19bc20ad42 314 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 206 2.8E-23 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SCD_RS01970 fcc1deee23b9800b24f7cb19bc20ad42 314 PANTHER PTHR12126 4 299 3.8E-68 T 22-04-2016 SCD_RS01970 fcc1deee23b9800b24f7cb19bc20ad42 314 SUPERFAMILY SSF51735 1 258 1.61E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS03150 4a03c6dc2c1d892ec98356e07b22adab 87 PRINTS PR00973 Ribosomal protein S17 family signature 26 49 2.3E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03150 4a03c6dc2c1d892ec98356e07b22adab 87 PRINTS PR00973 Ribosomal protein S17 family signature 68 75 2.3E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03150 4a03c6dc2c1d892ec98356e07b22adab 87 PRINTS PR00973 Ribosomal protein S17 family signature 58 68 2.3E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03150 4a03c6dc2c1d892ec98356e07b22adab 87 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 8 77 5.8E-37 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03150 4a03c6dc2c1d892ec98356e07b22adab 87 Pfam PF00366 Ribosomal protein S17 12 78 1.3E-33 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03150 4a03c6dc2c1d892ec98356e07b22adab 87 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 8 77 2.0E-27 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03150 4a03c6dc2c1d892ec98356e07b22adab 87 SUPERFAMILY SSF50249 8 84 8.57E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS03150 4a03c6dc2c1d892ec98356e07b22adab 87 Gene3D G3DSA:2.40.50.140 8 83 7.7E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS03150 4a03c6dc2c1d892ec98356e07b22adab 87 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 83 24.674 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03150 4a03c6dc2c1d892ec98356e07b22adab 87 PANTHER PTHR10744 8 85 8.3E-36 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS08045 a748d1b65981376021aa8b078ea0947c 349 SUPERFAMILY SSF51161 36 320 2.07E-76 T 22-04-2016 IPR011004 Trimeric LpxA-like SCD_RS08045 a748d1b65981376021aa8b078ea0947c 349 Gene3D G3DSA:2.160.10.10 110 213 3.4E-24 T 22-04-2016 SCD_RS08045 a748d1b65981376021aa8b078ea0947c 349 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 12 329 36.072 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 SCD_RS08045 a748d1b65981376021aa8b078ea0947c 349 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 225 260 4.7E-4 T 22-04-2016 IPR001451 Hexapeptide repeat SCD_RS08045 a748d1b65981376021aa8b078ea0947c 349 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 163 6.8E-7 T 22-04-2016 IPR001451 Hexapeptide repeat SCD_RS08045 a748d1b65981376021aa8b078ea0947c 349 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 261 296 5.7E-4 T 22-04-2016 IPR001451 Hexapeptide repeat SCD_RS08045 a748d1b65981376021aa8b078ea0947c 349 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 12 332 1.1E-112 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 SCD_RS08045 a748d1b65981376021aa8b078ea0947c 349 Gene3D G3DSA:2.160.10.10 214 333 3.2E-22 T 22-04-2016 SCD_RS08045 a748d1b65981376021aa8b078ea0947c 349 PANTHER PTHR22572:SF117 101 298 4.6E-55 T 22-04-2016 SCD_RS08045 a748d1b65981376021aa8b078ea0947c 349 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 25 90 1.9E-20 T 22-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 SCD_RS08045 a748d1b65981376021aa8b078ea0947c 349 PANTHER PTHR22572 101 298 4.6E-55 T 22-04-2016 SCD_RS03450 64765353a34b6b07cebe840514e9a684 556 SUPERFAMILY SSF52540 102 377 3.92E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03450 64765353a34b6b07cebe840514e9a684 556 SUPERFAMILY SSF47917 381 507 2.75E-32 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS03450 64765353a34b6b07cebe840514e9a684 556 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 156 371 1.6E-70 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS03450 64765353a34b6b07cebe840514e9a684 556 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 508 42.007 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS03450 64765353a34b6b07cebe840514e9a684 556 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 21 499 1.5E-195 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS03450 64765353a34b6b07cebe840514e9a684 556 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 378 502 2.5E-34 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS03450 64765353a34b6b07cebe840514e9a684 556 Gene3D G3DSA:1.20.150.20 381 507 6.4E-33 T 22-04-2016 SCD_RS03450 64765353a34b6b07cebe840514e9a684 556 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 362 371 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS03450 64765353a34b6b07cebe840514e9a684 556 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 33 99 7.4E-6 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS03450 64765353a34b6b07cebe840514e9a684 556 Gene3D G3DSA:3.40.50.300 102 378 2.4E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03450 64765353a34b6b07cebe840514e9a684 556 TIGRFAM TIGR03324 alt_F1F0_F1_al: alternate F1F0 ATPase, F1 subunit alpha 9 504 1.8E-282 T 22-04-2016 IPR017710 Alternate F1F0 ATPase, F1 subunit alpha GO:0015986|GO:0016820|GO:0045261 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS03450 64765353a34b6b07cebe840514e9a684 556 SUPERFAMILY SSF50615 21 101 1.02E-20 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS03450 64765353a34b6b07cebe840514e9a684 556 PANTHER PTHR15184:SF3 6 493 1.9E-237 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS03450 64765353a34b6b07cebe840514e9a684 556 PANTHER PTHR15184 6 493 1.9E-237 T 22-04-2016 SCD_RS03450 64765353a34b6b07cebe840514e9a684 556 Gene3D G3DSA:2.40.30.20 18 99 8.3E-22 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS03180 856bd07eca83a720958a3943521ff46c 177 PANTHER PTHR11655 1 176 1.0E-82 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SCD_RS03180 856bd07eca83a720958a3943521ff46c 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.222 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SCD_RS03180 856bd07eca83a720958a3943521ff46c 177 PIRSF PIRSF002162 1 177 3.2E-43 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SCD_RS03180 856bd07eca83a720958a3943521ff46c 177 PANTHER PTHR11655:SF14 1 176 1.0E-82 T 22-04-2016 SCD_RS03180 856bd07eca83a720958a3943521ff46c 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 3.6E-72 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SCD_RS03180 856bd07eca83a720958a3943521ff46c 177 Gene3D G3DSA:3.90.930.12 2 82 1.6E-26 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SCD_RS03180 856bd07eca83a720958a3943521ff46c 177 Gene3D G3DSA:3.90.930.12 83 177 5.4E-39 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SCD_RS03180 856bd07eca83a720958a3943521ff46c 177 Pfam PF00347 Ribosomal protein L6 90 164 7.0E-20 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SCD_RS03180 856bd07eca83a720958a3943521ff46c 177 Pfam PF00347 Ribosomal protein L6 11 82 8.2E-13 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SCD_RS03180 856bd07eca83a720958a3943521ff46c 177 SUPERFAMILY SSF56053 1 82 5.12E-23 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SCD_RS03180 856bd07eca83a720958a3943521ff46c 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03180 856bd07eca83a720958a3943521ff46c 177 SUPERFAMILY SSF56053 83 177 3.8E-35 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SCD_RS03180 856bd07eca83a720958a3943521ff46c 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.3E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SCD_RS03180 856bd07eca83a720958a3943521ff46c 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.3E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SCD_RS03180 856bd07eca83a720958a3943521ff46c 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.3E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SCD_RS14055 8aeba73a5fd0dcc8ccd254687f83aa25 183 Pfam PF00578 AhpC/TSA family 12 135 4.3E-18 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SCD_RS14055 8aeba73a5fd0dcc8ccd254687f83aa25 183 SUPERFAMILY SSF52833 6 183 2.43E-47 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS14055 8aeba73a5fd0dcc8ccd254687f83aa25 183 Gene3D G3DSA:3.40.30.10 12 140 3.9E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS14055 8aeba73a5fd0dcc8ccd254687f83aa25 183 PANTHER PTHR10681:SF91 12 183 6.2E-49 T 22-04-2016 SCD_RS14055 8aeba73a5fd0dcc8ccd254687f83aa25 183 PANTHER PTHR10681 12 183 6.2E-49 T 22-04-2016 SCD_RS03995 faf09a2bcd908a9c3a0c772b532e2d66 356 Pfam PF12831 FAD dependent oxidoreductase 6 120 1.4E-7 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS03995 faf09a2bcd908a9c3a0c772b532e2d66 356 Gene3D G3DSA:3.50.50.60 3 160 1.7E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS03995 faf09a2bcd908a9c3a0c772b532e2d66 356 PANTHER PTHR10617 1 324 1.4E-53 T 22-04-2016 SCD_RS03995 faf09a2bcd908a9c3a0c772b532e2d66 356 SUPERFAMILY SSF51905 5 158 2.6E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS03995 faf09a2bcd908a9c3a0c772b532e2d66 356 SUPERFAMILY SSF51905 251 317 2.6E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS03995 faf09a2bcd908a9c3a0c772b532e2d66 356 Gene3D G3DSA:3.30.9.10 161 296 7.2E-30 T 22-04-2016 SCD_RS03995 faf09a2bcd908a9c3a0c772b532e2d66 356 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 6 289 2.2E-59 T 22-04-2016 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 SCD_RS03995 faf09a2bcd908a9c3a0c772b532e2d66 356 PANTHER PTHR10617:SF108 1 324 1.4E-53 T 22-04-2016 SCD_RS03995 faf09a2bcd908a9c3a0c772b532e2d66 356 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 137 152 9.8E-12 T 22-04-2016 SCD_RS03995 faf09a2bcd908a9c3a0c772b532e2d66 356 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 255 270 9.8E-12 T 22-04-2016 SCD_RS03995 faf09a2bcd908a9c3a0c772b532e2d66 356 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 9.8E-12 T 22-04-2016 SCD_RS04510 05f68c4d89b2b26269e203f96d523f2d 391 TIGRFAM TIGR00109 hemH: ferrochelatase 139 365 7.7E-67 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SCD_RS04510 05f68c4d89b2b26269e203f96d523f2d 391 Hamap MF_00323 Ferrochelatase [hemH]. 15 365 37.173 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SCD_RS04510 05f68c4d89b2b26269e203f96d523f2d 391 PANTHER PTHR11108 16 106 5.6E-112 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SCD_RS04510 05f68c4d89b2b26269e203f96d523f2d 391 PANTHER PTHR11108 138 366 5.6E-112 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SCD_RS04510 05f68c4d89b2b26269e203f96d523f2d 391 SUPERFAMILY SSF53800 15 107 1.7E-101 T 22-04-2016 SCD_RS04510 05f68c4d89b2b26269e203f96d523f2d 391 SUPERFAMILY SSF53800 136 370 1.7E-101 T 22-04-2016 SCD_RS04510 05f68c4d89b2b26269e203f96d523f2d 391 ProSitePatterns PS00534 Ferrochelatase signature. 234 252 - T 22-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SCD_RS04510 05f68c4d89b2b26269e203f96d523f2d 391 Gene3D G3DSA:3.40.50.1400 247 366 2.7E-34 T 22-04-2016 SCD_RS04510 05f68c4d89b2b26269e203f96d523f2d 391 Gene3D G3DSA:3.40.50.1400 16 246 1.7E-70 T 22-04-2016 SCD_RS04510 05f68c4d89b2b26269e203f96d523f2d 391 Pfam PF00762 Ferrochelatase 137 364 4.4E-83 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SCD_RS04510 05f68c4d89b2b26269e203f96d523f2d 391 Pfam PF00762 Ferrochelatase 16 105 7.6E-26 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 PANTHER PTHR20856:SF20 1197 1356 0.0 T 22-04-2016 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 PANTHER PTHR20856:SF20 345 730 0.0 T 22-04-2016 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 PANTHER PTHR20856:SF20 748 935 0.0 T 22-04-2016 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 PANTHER PTHR20856:SF20 5 235 0.0 T 22-04-2016 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 PANTHER PTHR20856:SF20 1052 1146 0.0 T 22-04-2016 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 Pfam PF04560 RNA polymerase Rpb2, domain 7 1281 1354 1.5E-26 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1353 0.0 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 Gene3D G3DSA:3.90.1110.10 157 234 8.9E-65 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 Gene3D G3DSA:3.90.1110.10 351 449 8.9E-65 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 PANTHER PTHR20856 1197 1356 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 PANTHER PTHR20856 345 730 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 PANTHER PTHR20856 748 935 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 PANTHER PTHR20856 5 235 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 PANTHER PTHR20856 1052 1146 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 Gene3D G3DSA:2.40.270.10 1078 1257 1.4E-88 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 Gene3D G3DSA:2.40.270.10 798 825 1.4E-88 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 Pfam PF04563 RNA polymerase beta subunit 27 504 2.2E-40 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1081 1093 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 Pfam PF04565 RNA polymerase Rpb2, domain 3 518 585 2.3E-31 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 Gene3D G3DSA:2.40.50.100 720 797 1.3E-27 T 22-04-2016 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 Gene3D G3DSA:2.30.150.10 597 661 1.9E-29 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 SUPERFAMILY SSF64484 1057 1355 0.0 T 22-04-2016 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 SUPERFAMILY SSF64484 348 944 0.0 T 22-04-2016 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 SUPERFAMILY SSF64484 12 231 0.0 T 22-04-2016 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 Pfam PF00562 RNA polymerase Rpb2, domain 6 723 1279 4.0E-161 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 Pfam PF04561 RNA polymerase Rpb2, domain 2 155 226 3.2E-6 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 Pfam PF04561 RNA polymerase Rpb2, domain 2 363 459 1.3E-15 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 Gene3D G3DSA:2.40.50.150 1063 1077 7.0E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 Gene3D G3DSA:2.40.50.150 833 942 7.0E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 Pfam PF10385 RNA polymerase beta subunit external 1 domain 596 661 5.8E-27 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1357 12.306 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 Gene3D G3DSA:3.90.1100.10 450 596 1.3E-150 T 22-04-2016 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 Gene3D G3DSA:3.90.1100.10 20 155 1.3E-150 T 22-04-2016 SCD_RS03070 7f2277110ba3566442bee67ace4cfdd6 1357 Gene3D G3DSA:3.90.1100.10 664 718 1.3E-150 T 22-04-2016 SCD_RS03125 0df0ced8c6ce4c519f2b4070d11bf106 91 PANTHER PTHR11880 1 91 7.8E-49 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SCD_RS03125 0df0ced8c6ce4c519f2b4070d11bf106 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.2E-22 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SCD_RS03125 0df0ced8c6ce4c519f2b4070d11bf106 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.2E-22 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SCD_RS03125 0df0ced8c6ce4c519f2b4070d11bf106 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.2E-22 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SCD_RS03125 0df0ced8c6ce4c519f2b4070d11bf106 91 PIRSF PIRSF002144 1 91 6.5E-32 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SCD_RS03125 0df0ced8c6ce4c519f2b4070d11bf106 91 Pfam PF00203 Ribosomal protein S19 3 83 9.4E-36 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SCD_RS03125 0df0ced8c6ce4c519f2b4070d11bf106 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 SCD_RS03125 0df0ced8c6ce4c519f2b4070d11bf106 91 Gene3D G3DSA:3.30.860.10 1 90 1.2E-39 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 SCD_RS03125 0df0ced8c6ce4c519f2b4070d11bf106 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.969 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SCD_RS03125 0df0ced8c6ce4c519f2b4070d11bf106 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 8.4E-44 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 SCD_RS03125 0df0ced8c6ce4c519f2b4070d11bf106 91 SUPERFAMILY SSF54570 3 84 1.31E-33 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 SCD_RS11510 7f6d11935d622afa30da65f3c2d472d2 359 Gene3D G3DSA:3.20.20.70 2 357 1.6E-138 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS11510 7f6d11935d622afa30da65f3c2d472d2 359 PANTHER PTHR22893 5 358 4.0E-185 T 22-04-2016 SCD_RS11510 7f6d11935d622afa30da65f3c2d472d2 359 PANTHER PTHR22893:SF14 5 358 4.0E-185 T 22-04-2016 SCD_RS11510 7f6d11935d622afa30da65f3c2d472d2 359 SUPERFAMILY SSF51395 2 358 1.95E-129 T 22-04-2016 SCD_RS11510 7f6d11935d622afa30da65f3c2d472d2 359 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 337 1.6E-85 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 SCD_RS00185 118544cea960fb515dc08563472b3146 185 PANTHER PTHR17490:SF8 8 181 3.0E-61 T 22-04-2016 SCD_RS00185 118544cea960fb515dc08563472b3146 185 SUPERFAMILY SSF55821 5 183 7.02E-44 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SCD_RS00185 118544cea960fb515dc08563472b3146 185 PANTHER PTHR17490 8 181 3.0E-61 T 22-04-2016 SCD_RS00185 118544cea960fb515dc08563472b3146 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 5 184 34.384 T 22-04-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 SCD_RS00185 118544cea960fb515dc08563472b3146 185 Gene3D G3DSA:3.90.870.10 6 185 7.8E-46 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SCD_RS00185 118544cea960fb515dc08563472b3146 185 Pfam PF01300 Telomere recombination 15 184 3.3E-33 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 SCD_RS12385 43c5aac66869337e438908e80f2031ac 455 Pfam PF01565 FAD binding domain 40 178 1.7E-37 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SCD_RS12385 43c5aac66869337e438908e80f2031ac 455 Gene3D G3DSA:3.30.43.10 2 94 2.0E-27 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SCD_RS12385 43c5aac66869337e438908e80f2031ac 455 SUPERFAMILY SSF55103 224 455 1.08E-62 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 SCD_RS12385 43c5aac66869337e438908e80f2031ac 455 Pfam PF02913 FAD linked oxidases, C-terminal domain 216 453 1.0E-62 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 SCD_RS12385 43c5aac66869337e438908e80f2031ac 455 PANTHER PTHR11748 1 455 1.2E-142 T 22-04-2016 SCD_RS12385 43c5aac66869337e438908e80f2031ac 455 SUPERFAMILY SSF56176 5 216 8.41E-71 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SCD_RS12385 43c5aac66869337e438908e80f2031ac 455 PANTHER PTHR11748:SF35 1 455 1.2E-142 T 22-04-2016 SCD_RS12385 43c5aac66869337e438908e80f2031ac 455 Gene3D G3DSA:1.10.45.10 414 453 6.8E-15 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 SCD_RS12385 43c5aac66869337e438908e80f2031ac 455 Gene3D G3DSA:3.30.465.10 96 216 1.8E-41 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SCD_RS00280 db2250ad46884d883b191871f6f58fdc 335 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 215 330 1.9E-12 T 22-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS00280 db2250ad46884d883b191871f6f58fdc 335 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 332 2.1E-96 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 SCD_RS00280 db2250ad46884d883b191871f6f58fdc 335 PANTHER PTHR34388 1 334 9.3E-68 T 22-04-2016 SCD_RS00280 db2250ad46884d883b191871f6f58fdc 335 Pfam PF06144 DNA polymerase III, delta subunit 21 189 4.1E-29 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 SCD_RS00280 db2250ad46884d883b191871f6f58fdc 335 Gene3D G3DSA:3.40.50.300 1 139 3.3E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00280 db2250ad46884d883b191871f6f58fdc 335 SUPERFAMILY SSF48019 212 334 4.25E-30 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SCD_RS00280 db2250ad46884d883b191871f6f58fdc 335 Gene3D G3DSA:1.10.8.60 143 222 6.9E-32 T 22-04-2016 SCD_RS00280 db2250ad46884d883b191871f6f58fdc 335 Gene3D G3DSA:1.20.272.20 223 334 3.7E-40 T 22-04-2016 SCD_RS00280 db2250ad46884d883b191871f6f58fdc 335 SUPERFAMILY SSF52540 2 210 3.03E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS01020 ac9f467aa55fb44888f6d1e86f4612ba 543 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 184 286 2.3E-12 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS01020 ac9f467aa55fb44888f6d1e86f4612ba 543 Gene3D G3DSA:3.40.120.10 2 195 5.9E-64 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS01020 ac9f467aa55fb44888f6d1e86f4612ba 543 PANTHER PTHR22573:SF2 1 540 4.4E-276 T 22-04-2016 SCD_RS01020 ac9f467aa55fb44888f6d1e86f4612ba 543 Gene3D G3DSA:3.40.120.10 196 282 3.4E-37 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS01020 ac9f467aa55fb44888f6d1e86f4612ba 543 SUPERFAMILY SSF55957 409 543 6.67E-48 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS01020 ac9f467aa55fb44888f6d1e86f4612ba 543 SUPERFAMILY SSF53738 278 414 3.45E-36 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS01020 ac9f467aa55fb44888f6d1e86f4612ba 543 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 107 116 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS01020 ac9f467aa55fb44888f6d1e86f4612ba 543 SUPERFAMILY SSF53738 2 212 1.49E-48 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS01020 ac9f467aa55fb44888f6d1e86f4612ba 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 270 285 4.5E-23 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS01020 ac9f467aa55fb44888f6d1e86f4612ba 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 106 120 4.5E-23 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS01020 ac9f467aa55fb44888f6d1e86f4612ba 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 241 254 4.5E-23 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS01020 ac9f467aa55fb44888f6d1e86f4612ba 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 205 224 4.5E-23 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS01020 ac9f467aa55fb44888f6d1e86f4612ba 543 Gene3D G3DSA:3.40.120.10 283 401 5.0E-45 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS01020 ac9f467aa55fb44888f6d1e86f4612ba 543 PANTHER PTHR22573 1 540 4.4E-276 T 22-04-2016 SCD_RS01020 ac9f467aa55fb44888f6d1e86f4612ba 543 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 450 507 2.1E-6 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS01020 ac9f467aa55fb44888f6d1e86f4612ba 543 SUPERFAMILY SSF53738 183 291 4.32E-29 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS01020 ac9f467aa55fb44888f6d1e86f4612ba 543 Gene3D G3DSA:3.30.310.50 402 543 3.2E-61 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS01020 ac9f467aa55fb44888f6d1e86f4612ba 543 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 14 153 1.8E-35 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS01020 ac9f467aa55fb44888f6d1e86f4612ba 543 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 294 407 1.7E-31 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS08300 5852421f81383362887ec3d90a75e1d3 403 Pfam PF00155 Aminotransferase class I and II 32 390 3.1E-46 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SCD_RS08300 5852421f81383362887ec3d90a75e1d3 403 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 394 8.5E-188 T 22-04-2016 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 SCD_RS08300 5852421f81383362887ec3d90a75e1d3 403 PANTHER PTHR11751 8 393 6.3E-115 T 22-04-2016 SCD_RS08300 5852421f81383362887ec3d90a75e1d3 403 SUPERFAMILY SSF53383 2 395 2.2E-89 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS08300 5852421f81383362887ec3d90a75e1d3 403 Gene3D G3DSA:3.40.640.10 43 287 1.4E-62 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS08300 5852421f81383362887ec3d90a75e1d3 403 Gene3D G3DSA:3.90.1150.10 288 397 1.1E-23 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS08300 5852421f81383362887ec3d90a75e1d3 403 PANTHER PTHR11751:SF354 8 393 6.3E-115 T 22-04-2016 SCD_RS07515 b965196e2c2e8b1f8aa5cca86b886b03 233 SUPERFAMILY SSF46894 162 228 7.48E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SCD_RS07515 b965196e2c2e8b1f8aa5cca86b886b03 233 Gene3D G3DSA:3.40.50.2300 13 140 2.3E-30 T 22-04-2016 SCD_RS07515 b965196e2c2e8b1f8aa5cca86b886b03 233 Pfam PF00196 Bacterial regulatory proteins, luxR family 170 225 5.8E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS07515 b965196e2c2e8b1f8aa5cca86b886b03 233 Pfam PF00072 Response regulator receiver domain 19 134 2.4E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS07515 b965196e2c2e8b1f8aa5cca86b886b03 233 ProSitePatterns PS00622 LuxR-type HTH domain signature. 185 212 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS07515 b965196e2c2e8b1f8aa5cca86b886b03 233 PANTHER PTHR26402:SF458 17 227 6.7E-63 T 22-04-2016 SCD_RS07515 b965196e2c2e8b1f8aa5cca86b886b03 233 Gene3D G3DSA:1.10.10.10 141 227 5.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS07515 b965196e2c2e8b1f8aa5cca86b886b03 233 SMART SM00421 168 225 2.2E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS07515 b965196e2c2e8b1f8aa5cca86b886b03 233 PANTHER PTHR26402 17 227 6.7E-63 T 22-04-2016 SCD_RS07515 b965196e2c2e8b1f8aa5cca86b886b03 233 SUPERFAMILY SSF52172 16 152 5.69E-30 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS07515 b965196e2c2e8b1f8aa5cca86b886b03 233 SMART SM00448 17 134 2.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS07515 b965196e2c2e8b1f8aa5cca86b886b03 233 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 201 1.4E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS07515 b965196e2c2e8b1f8aa5cca86b886b03 233 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 201 213 1.4E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS07515 b965196e2c2e8b1f8aa5cca86b886b03 233 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 185 1.4E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS07935 04f601a237c287ab4c2764e667ab85a8 610 SUPERFAMILY SSF142019 193 414 2.75E-65 T 22-04-2016 SCD_RS07935 04f601a237c287ab4c2764e667ab85a8 610 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 495 577 2.2E-26 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 SCD_RS07935 04f601a237c287ab4c2764e667ab85a8 610 SUPERFAMILY SSF142984 415 485 9.55E-13 T 22-04-2016 SCD_RS07935 04f601a237c287ab4c2764e667ab85a8 610 Pfam PF10531 SLBB domain 417 446 2.0E-6 T 22-04-2016 IPR019554 Soluble ligand binding domain SCD_RS07935 04f601a237c287ab4c2764e667ab85a8 610 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 341 356 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 SCD_RS07935 04f601a237c287ab4c2764e667ab85a8 610 PANTHER PTHR11780:SF0 192 573 1.8E-140 T 22-04-2016 SCD_RS07935 04f601a237c287ab4c2764e667ab85a8 610 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 208 391 3.9E-39 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain SCD_RS07935 04f601a237c287ab4c2764e667ab85a8 610 PANTHER PTHR11780 192 573 1.8E-140 T 22-04-2016 SCD_RS07935 04f601a237c287ab4c2764e667ab85a8 610 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 506 517 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 SCD_RS07935 04f601a237c287ab4c2764e667ab85a8 610 SUPERFAMILY SSF140490 490 580 5.89E-28 T 22-04-2016 SCD_RS07935 04f601a237c287ab4c2764e667ab85a8 610 SUPERFAMILY SSF52833 11 176 4.58E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS07935 04f601a237c287ab4c2764e667ab85a8 610 SMART SM00928 493 538 3.4E-19 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 SCD_RS07935 04f601a237c287ab4c2764e667ab85a8 610 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 16 152 3.6E-28 T 22-04-2016 SCD_RS01990 4466efb57fba3b8ffe6641c744615881 289 Gene3D G3DSA:3.40.50.1820 45 268 1.5E-24 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SCD_RS01990 4466efb57fba3b8ffe6641c744615881 289 Pfam PF00561 alpha/beta hydrolase fold 51 163 8.7E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SCD_RS01990 4466efb57fba3b8ffe6641c744615881 289 SUPERFAMILY SSF53474 45 284 1.26E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SCD_RS11495 b47fa91b8a22bc8d30a16999ed3348d8 570 Pfam PF08269 Cache domain 28 210 1.0E-27 T 22-04-2016 IPR004010 Double Cache domain 2 SCD_RS11495 b47fa91b8a22bc8d30a16999ed3348d8 570 Gene3D G3DSA:3.30.450.20 26 210 4.3E-43 T 22-04-2016 SCD_RS11495 b47fa91b8a22bc8d30a16999ed3348d8 570 SMART SM00304 240 293 4.8E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS11495 b47fa91b8a22bc8d30a16999ed3348d8 570 SMART SM00283 308 569 2.0E-84 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SCD_RS11495 b47fa91b8a22bc8d30a16999ed3348d8 570 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 371 568 1.4E-59 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SCD_RS11495 b47fa91b8a22bc8d30a16999ed3348d8 570 SUPERFAMILY SSF58104 261 569 9.16E-81 T 22-04-2016 SCD_RS11495 b47fa91b8a22bc8d30a16999ed3348d8 570 Pfam PF00672 HAMP domain 222 289 3.1E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS11495 b47fa91b8a22bc8d30a16999ed3348d8 570 Gene3D G3DSA:1.10.287.950 323 541 8.2E-61 T 22-04-2016 SCD_RS11495 b47fa91b8a22bc8d30a16999ed3348d8 570 SMART SM01049 38 128 1.5E-29 T 22-04-2016 IPR033480 Single Cache domain 2 SCD_RS11495 b47fa91b8a22bc8d30a16999ed3348d8 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 11 36 3.3E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SCD_RS11495 b47fa91b8a22bc8d30a16999ed3348d8 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 483 512 3.3E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SCD_RS11495 b47fa91b8a22bc8d30a16999ed3348d8 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 435 464 3.3E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SCD_RS11495 b47fa91b8a22bc8d30a16999ed3348d8 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 433 3.3E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SCD_RS11495 b47fa91b8a22bc8d30a16999ed3348d8 570 PANTHER PTHR32089 186 570 4.5E-127 T 22-04-2016 SCD_RS03130 e76237cf58ed395ced98e9d20021fc89 109 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 109 25.035 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SCD_RS03130 e76237cf58ed395ced98e9d20021fc89 109 PANTHER PTHR13501 1 107 2.0E-48 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SCD_RS03130 e76237cf58ed395ced98e9d20021fc89 109 Pfam PF00237 Ribosomal protein L22p/L17e 10 107 2.0E-30 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SCD_RS03130 e76237cf58ed395ced98e9d20021fc89 109 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03130 e76237cf58ed395ced98e9d20021fc89 109 SUPERFAMILY SSF54843 2 108 1.96E-40 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SCD_RS03130 e76237cf58ed395ced98e9d20021fc89 109 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 6.9E-44 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SCD_RS03130 e76237cf58ed395ced98e9d20021fc89 109 Gene3D G3DSA:3.90.470.10 1 108 1.7E-40 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SCD_RS04085 e017c24f6a41d86febf6fc4c5c6037df 255 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 67 89 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SCD_RS04085 e017c24f6a41d86febf6fc4c5c6037df 255 PANTHER PTHR15362 17 159 1.4E-31 T 22-04-2016 SCD_RS04085 e017c24f6a41d86febf6fc4c5c6037df 255 Pfam PF01066 CDP-alcohol phosphatidyltransferase 26 89 9.8E-14 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SCD_RS04085 e017c24f6a41d86febf6fc4c5c6037df 255 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 33 193 1.9E-35 T 22-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 SCD_RS00705 95bfc36cc5401d7616d103af1e3a0229 155 ProSitePatterns PS00380 Rhodanese signature 1. 73 84 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 SCD_RS00705 95bfc36cc5401d7616d103af1e3a0229 155 SMART SM00450 48 143 1.2E-23 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS00705 95bfc36cc5401d7616d103af1e3a0229 155 Gene3D G3DSA:3.40.250.10 59 142 8.0E-26 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS00705 95bfc36cc5401d7616d103af1e3a0229 155 SUPERFAMILY SSF52821 58 141 1.44E-27 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS00705 95bfc36cc5401d7616d103af1e3a0229 155 Pfam PF00581 Rhodanese-like domain 60 140 1.9E-16 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 Gene3D G3DSA:3.50.50.60 109 244 6.9E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 Gene3D G3DSA:2.40.50.100 6 83 1.2E-20 T 22-04-2016 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 366 382 7.8E-40 T 22-04-2016 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 279 297 7.8E-40 T 22-04-2016 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 112 131 7.8E-40 T 22-04-2016 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 395 417 7.8E-40 T 22-04-2016 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 259 7.8E-40 T 22-04-2016 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 SUPERFAMILY SSF51905 107 440 4.07E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 Gene3D G3DSA:3.30.390.30 437 565 2.4E-46 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 SUPERFAMILY SSF51230 3 95 2.09E-21 T 22-04-2016 IPR011053 Single hybrid motif SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 532 552 8.1E-73 T 22-04-2016 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 159 8.1E-73 T 22-04-2016 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 367 381 8.1E-73 T 22-04-2016 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 304 8.1E-73 T 22-04-2016 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 111 133 8.1E-73 T 22-04-2016 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 244 253 8.1E-73 T 22-04-2016 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 510 525 8.1E-73 T 22-04-2016 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 417 8.1E-73 T 22-04-2016 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 445 466 8.1E-73 T 22-04-2016 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 PIRSF PIRSF000350 37 569 5.2E-89 T 22-04-2016 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 145 155 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 Pfam PF00364 Biotin-requiring enzyme 6 77 8.4E-19 T 22-04-2016 IPR000089 Biotin/lipoyl attachment SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 Gene3D G3DSA:3.50.50.60 245 436 1.2E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 111 430 3.4E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 110 563 1.1E-152 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 449 554 3.1E-34 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 PANTHER PTHR22912 96 561 9.6E-238 T 22-04-2016 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 SUPERFAMILY SSF55424 445 568 5.15E-39 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SCD_RS04235 4d99f180f721dddbb82e890cecdf57a8 573 PANTHER PTHR22912:SF160 96 561 9.6E-238 T 22-04-2016 SCD_RS09665 ace1353cdc2d93126308c3f66d642e20 103 PANTHER PTHR36511 45 102 1.2E-16 T 22-04-2016 SCD_RS09665 ace1353cdc2d93126308c3f66d642e20 103 SUPERFAMILY SSF47413 46 91 8.7E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SCD_RS09665 ace1353cdc2d93126308c3f66d642e20 103 Gene3D G3DSA:1.10.260.40 47 96 1.1E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SCD_RS09665 ace1353cdc2d93126308c3f66d642e20 103 Pfam PF01381 Helix-turn-helix 48 82 2.5E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SCD_RS09665 ace1353cdc2d93126308c3f66d642e20 103 PANTHER PTHR36511:SF3 45 102 1.2E-16 T 22-04-2016 SCD_RS09665 ace1353cdc2d93126308c3f66d642e20 103 SMART SM00530 44 98 5.8E-4 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SCD_RS02025 09c6f4ebb716e8fedfec350c4d58ec86 232 Pfam PF00005 ABC transporter 25 173 2.3E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS02025 09c6f4ebb716e8fedfec350c4d58ec86 232 SUPERFAMILY SSF52540 6 226 1.21E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02025 09c6f4ebb716e8fedfec350c4d58ec86 232 PANTHER PTHR24220 7 229 4.8E-98 T 22-04-2016 SCD_RS02025 09c6f4ebb716e8fedfec350c4d58ec86 232 SMART SM00382 34 221 1.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS02025 09c6f4ebb716e8fedfec350c4d58ec86 232 Gene3D G3DSA:3.40.50.300 6 224 1.9E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02025 09c6f4ebb716e8fedfec350c4d58ec86 232 PANTHER PTHR24220:SF578 7 229 4.8E-98 T 22-04-2016 SCD_RS02025 09c6f4ebb716e8fedfec350c4d58ec86 232 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS10640 b86d241fe07e943515fddb0fef0ce94b 89 PANTHER PTHR36450 2 80 6.4E-29 T 22-04-2016 SCD_RS10640 b86d241fe07e943515fddb0fef0ce94b 89 SUPERFAMILY SSF52833 2 76 3.98E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS10640 b86d241fe07e943515fddb0fef0ce94b 89 PANTHER PTHR36450:SF1 2 80 6.4E-29 T 22-04-2016 SCD_RS10640 b86d241fe07e943515fddb0fef0ce94b 89 Pfam PF13192 Thioredoxin domain 3 76 4.2E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS10640 b86d241fe07e943515fddb0fef0ce94b 89 Gene3D G3DSA:3.40.30.10 2 76 1.8E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS10640 b86d241fe07e943515fddb0fef0ce94b 89 PIRSF PIRSF037031 1 77 1.2E-28 T 22-04-2016 IPR005243 Redox-active disulphide protein 2 SCD_RS08835 5cf686da5c8c8070a6215cf99ca065ff 262 SUPERFAMILY SSF49879 164 246 2.87E-7 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 SCD_RS08835 5cf686da5c8c8070a6215cf99ca065ff 262 Gene3D G3DSA:2.60.200.20 17 108 1.4E-25 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 SCD_RS08835 5cf686da5c8c8070a6215cf99ca065ff 262 SMART SM00240 22 72 7.9E-10 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 SCD_RS08835 5cf686da5c8c8070a6215cf99ca065ff 262 Pfam PF00498 FHA domain 24 85 6.5E-17 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 SCD_RS08835 5cf686da5c8c8070a6215cf99ca065ff 262 Gene3D G3DSA:2.60.200.20 163 246 3.2E-5 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 SCD_RS08835 5cf686da5c8c8070a6215cf99ca065ff 262 SUPERFAMILY SSF49879 3 103 1.32E-25 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 SCD_RS08590 0e0c50c32eb83dc4a63a5098235f36bb 314 PANTHER PTHR11935:SF28 9 236 1.3E-46 T 22-04-2016 SCD_RS08590 0e0c50c32eb83dc4a63a5098235f36bb 314 SUPERFAMILY SSF56281 8 262 2.1E-46 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS08590 0e0c50c32eb83dc4a63a5098235f36bb 314 Pfam PF00753 Metallo-beta-lactamase superfamily 26 190 2.4E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS08590 0e0c50c32eb83dc4a63a5098235f36bb 314 Gene3D G3DSA:3.60.15.10 25 245 2.4E-36 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS08590 0e0c50c32eb83dc4a63a5098235f36bb 314 PANTHER PTHR11935 9 236 1.3E-46 T 22-04-2016 SCD_RS08590 0e0c50c32eb83dc4a63a5098235f36bb 314 SMART SM00849 24 229 8.8E-23 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS12735 dc8a3c44959041a200c7d6519885f9d1 128 SUPERFAMILY SSF51182 62 109 3.08E-6 T 22-04-2016 IPR011051 RmlC-like cupin domain SCD_RS12735 dc8a3c44959041a200c7d6519885f9d1 128 Gene3D G3DSA:2.60.120.10 63 105 3.6E-5 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SCD_RS08245 e129737896b49bfb86b7579577804134 674 Gene3D G3DSA:1.10.287.610 4 70 3.7E-26 T 22-04-2016 SCD_RS08245 e129737896b49bfb86b7579577804134 674 Gene3D G3DSA:3.40.50.10190 598 673 3.3E-25 T 22-04-2016 IPR001357 BRCT domain SCD_RS08245 e129737896b49bfb86b7579577804134 674 SMART SM00532 6 453 7.2E-250 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 SCD_RS08245 e129737896b49bfb86b7579577804134 674 PIRSF PIRSF001604 3 674 3.9E-240 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SCD_RS08245 e129737896b49bfb86b7579577804134 674 Pfam PF12826 Helix-hairpin-helix motif 515 578 2.8E-24 T 22-04-2016 SCD_RS08245 e129737896b49bfb86b7579577804134 674 PANTHER PTHR23389:SF9 1 538 7.3E-194 T 22-04-2016 SCD_RS08245 e129737896b49bfb86b7579577804134 674 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 8 320 3.1E-123 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 SCD_RS08245 e129737896b49bfb86b7579577804134 674 Gene3D G3DSA:1.10.150.20 440 508 2.1E-28 T 22-04-2016 SCD_RS08245 e129737896b49bfb86b7579577804134 674 Gene3D G3DSA:2.40.50.140 321 393 3.0E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS08245 e129737896b49bfb86b7579577804134 674 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 413 439 1.2E-10 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 SCD_RS08245 e129737896b49bfb86b7579577804134 674 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 117 146 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site SCD_RS08245 e129737896b49bfb86b7579577804134 674 Gene3D G3DSA:3.30.470.30 121 252 1.1E-48 T 22-04-2016 SCD_RS08245 e129737896b49bfb86b7579577804134 674 PANTHER PTHR23389 1 538 7.3E-194 T 22-04-2016 SCD_RS08245 e129737896b49bfb86b7579577804134 674 SMART SM00278 549 568 9.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SCD_RS08245 e129737896b49bfb86b7579577804134 674 SMART SM00278 451 470 27.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SCD_RS08245 e129737896b49bfb86b7579577804134 674 SMART SM00278 517 536 240.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SCD_RS08245 e129737896b49bfb86b7579577804134 674 SMART SM00278 485 504 2400.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SCD_RS08245 e129737896b49bfb86b7579577804134 674 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 14 667 3.8E-250 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SCD_RS08245 e129737896b49bfb86b7579577804134 674 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 600 671 8.4E-14 T 22-04-2016 IPR001357 BRCT domain SCD_RS08245 e129737896b49bfb86b7579577804134 674 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 324 399 3.8E-35 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 SCD_RS08245 e129737896b49bfb86b7579577804134 674 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 333 348 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site SCD_RS08245 e129737896b49bfb86b7579577804134 674 SUPERFAMILY SSF47781 412 589 6.3E-61 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SCD_RS08245 e129737896b49bfb86b7579577804134 674 SMART SM00292 598 673 1.2E-10 T 22-04-2016 IPR001357 BRCT domain SCD_RS08245 e129737896b49bfb86b7579577804134 674 SUPERFAMILY SSF52113 595 672 2.33E-20 T 22-04-2016 IPR001357 BRCT domain SCD_RS08245 e129737896b49bfb86b7579577804134 674 Hamap MF_01588 DNA ligase [ligA]. 5 672 52.318 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SCD_RS08245 e129737896b49bfb86b7579577804134 674 SUPERFAMILY SSF56091 6 318 2.88E-115 T 22-04-2016 SCD_RS08245 e129737896b49bfb86b7579577804134 674 SUPERFAMILY SSF50249 320 401 1.52E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS08245 e129737896b49bfb86b7579577804134 674 Gene3D G3DSA:1.10.150.20 509 589 3.1E-35 T 22-04-2016 SCD_RS02000 38f35734e4f670b164fc064f6ba18bae 166 Pfam PF05433 Glycine zipper 2TM domain 64 105 1.0E-8 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 SCD_RS02000 38f35734e4f670b164fc064f6ba18bae 166 PANTHER PTHR35603 1 161 2.4E-21 T 22-04-2016 SCD_RS02000 38f35734e4f670b164fc064f6ba18bae 166 PANTHER PTHR35603:SF2 1 161 2.4E-21 T 22-04-2016 SCD_RS05665 99df7b1f96b223773d88141bf09e9a50 142 SUPERFAMILY SSF111038 3 142 3.53E-45 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 SCD_RS05665 99df7b1f96b223773d88141bf09e9a50 142 Pfam PF01894 Uncharacterised protein family UPF0047 23 138 8.2E-37 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 SCD_RS05665 99df7b1f96b223773d88141bf09e9a50 142 PIRSF PIRSF004681 3 142 1.0E-47 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 SCD_RS05665 99df7b1f96b223773d88141bf09e9a50 142 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 9 142 3.6E-41 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 SCD_RS05665 99df7b1f96b223773d88141bf09e9a50 142 Gene3D G3DSA:2.60.120.460 2 142 8.7E-51 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 SCD_RS05665 99df7b1f96b223773d88141bf09e9a50 142 PANTHER PTHR30615 13 142 1.7E-53 T 22-04-2016 SCD_RS12720 11989768fa759ff32f664759bd400cf9 66 Gene3D G3DSA:1.10.443.10 27 54 9.9E-10 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SCD_RS12720 11989768fa759ff32f664759bd400cf9 66 Pfam PF00589 Phage integrase family 27 52 4.7E-8 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SCD_RS12720 11989768fa759ff32f664759bd400cf9 66 SUPERFAMILY SSF56349 27 53 1.56E-9 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SCD_RS07665 d6287c080c1a880e55c3aa21ba6887b3 162 PANTHER PTHR11717:SF7 2 159 3.3E-61 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SCD_RS07665 d6287c080c1a880e55c3aa21ba6887b3 162 SMART SM00226 4 153 5.9E-52 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SCD_RS07665 d6287c080c1a880e55c3aa21ba6887b3 162 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 6 23 6.6E-25 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SCD_RS07665 d6287c080c1a880e55c3aa21ba6887b3 162 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 83 98 6.6E-25 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SCD_RS07665 d6287c080c1a880e55c3aa21ba6887b3 162 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 49 65 6.6E-25 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SCD_RS07665 d6287c080c1a880e55c3aa21ba6887b3 162 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 125 140 6.6E-25 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SCD_RS07665 d6287c080c1a880e55c3aa21ba6887b3 162 PANTHER PTHR11717 2 159 3.3E-61 T 22-04-2016 SCD_RS07665 d6287c080c1a880e55c3aa21ba6887b3 162 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 146 1.7E-41 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SCD_RS07665 d6287c080c1a880e55c3aa21ba6887b3 162 Gene3D G3DSA:3.40.50.270 3 154 5.5E-54 T 22-04-2016 SCD_RS07665 d6287c080c1a880e55c3aa21ba6887b3 162 SUPERFAMILY SSF52788 3 154 1.96E-52 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SCD_RS14105 f9f64c458ec5d84d7fd3cdbf20f214b4 744 SUPERFAMILY SSF53300 554 739 3.56E-20 T 22-04-2016 IPR002035 von Willebrand factor, type A SCD_RS14105 f9f64c458ec5d84d7fd3cdbf20f214b4 744 PANTHER PTHR41248 406 742 1.3E-35 T 22-04-2016 SCD_RS14105 f9f64c458ec5d84d7fd3cdbf20f214b4 744 Pfam PF00092 von Willebrand factor type A domain 556 711 4.7E-9 T 22-04-2016 IPR002035 von Willebrand factor, type A SCD_RS14105 f9f64c458ec5d84d7fd3cdbf20f214b4 744 PANTHER PTHR41248:SF1 406 742 1.3E-35 T 22-04-2016 SCD_RS14105 f9f64c458ec5d84d7fd3cdbf20f214b4 744 SMART SM00327 553 743 1.5E-11 T 22-04-2016 IPR002035 von Willebrand factor, type A SCD_RS14105 f9f64c458ec5d84d7fd3cdbf20f214b4 744 Gene3D G3DSA:3.40.50.410 556 713 4.4E-10 T 22-04-2016 IPR002035 von Willebrand factor, type A SCD_RS15580 06f356ce0a9da7da0085f69b072ac9da 919 SMART SM00091 359 425 0.003 T 22-04-2016 IPR000014 PAS domain SCD_RS15580 06f356ce0a9da7da0085f69b072ac9da 919 SMART SM00267 477 650 3.6E-57 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15580 06f356ce0a9da7da0085f69b072ac9da 919 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 487 650 1.1E-43 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15580 06f356ce0a9da7da0085f69b072ac9da 919 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 365 479 1.1E-10 T 22-04-2016 IPR000014 PAS domain SCD_RS15580 06f356ce0a9da7da0085f69b072ac9da 919 Pfam PF08448 PAS fold 365 479 1.0E-12 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS15580 06f356ce0a9da7da0085f69b072ac9da 919 Pfam PF08376 Nitrate and nitrite sensing 62 307 1.4E-5 T 22-04-2016 IPR013587 Nitrate/nitrite sensing protein SCD_RS15580 06f356ce0a9da7da0085f69b072ac9da 919 Gene3D G3DSA:3.30.450.20 356 476 1.1E-16 T 22-04-2016 SCD_RS15580 06f356ce0a9da7da0085f69b072ac9da 919 Gene3D G3DSA:3.30.70.270 490 652 8.2E-54 T 22-04-2016 SCD_RS15580 06f356ce0a9da7da0085f69b072ac9da 919 PANTHER PTHR33121:SF10 664 909 4.8E-64 T 22-04-2016 SCD_RS15580 06f356ce0a9da7da0085f69b072ac9da 919 Pfam PF00563 EAL domain 669 905 4.9E-62 T 22-04-2016 IPR001633 EAL domain SCD_RS15580 06f356ce0a9da7da0085f69b072ac9da 919 Gene3D G3DSA:3.20.20.450 665 911 5.5E-78 T 22-04-2016 IPR001633 EAL domain SCD_RS15580 06f356ce0a9da7da0085f69b072ac9da 919 SUPERFAMILY SSF55073 494 652 2.43E-48 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS15580 06f356ce0a9da7da0085f69b072ac9da 919 SUPERFAMILY SSF55785 345 476 2.09E-16 T 22-04-2016 IPR000014 PAS domain SCD_RS15580 06f356ce0a9da7da0085f69b072ac9da 919 PANTHER PTHR33121 664 909 4.8E-64 T 22-04-2016 SCD_RS15580 06f356ce0a9da7da0085f69b072ac9da 919 Pfam PF00990 Diguanylate cyclase, GGDEF domain 489 646 2.0E-44 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15580 06f356ce0a9da7da0085f69b072ac9da 919 SMART SM00052 662 910 1.8E-72 T 22-04-2016 IPR001633 EAL domain SCD_RS15580 06f356ce0a9da7da0085f69b072ac9da 919 SUPERFAMILY SSF141868 668 912 1.57E-72 T 22-04-2016 IPR001633 EAL domain SCD_RS08630 08ed14f15de4c217837783fb253703cb 317 PANTHER PTHR22912:SF48 4 314 8.5E-155 T 22-04-2016 SCD_RS08630 08ed14f15de4c217837783fb253703cb 317 PANTHER PTHR22912 4 314 8.5E-155 T 22-04-2016 SCD_RS08630 08ed14f15de4c217837783fb253703cb 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 4.6E-40 T 22-04-2016 SCD_RS08630 08ed14f15de4c217837783fb253703cb 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 4.6E-40 T 22-04-2016 SCD_RS08630 08ed14f15de4c217837783fb253703cb 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 4.6E-40 T 22-04-2016 SCD_RS08630 08ed14f15de4c217837783fb253703cb 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 4.6E-40 T 22-04-2016 SCD_RS08630 08ed14f15de4c217837783fb253703cb 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 4.6E-40 T 22-04-2016 SCD_RS08630 08ed14f15de4c217837783fb253703cb 317 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 SCD_RS08630 08ed14f15de4c217837783fb253703cb 317 SUPERFAMILY SSF51905 2 313 7.18E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS08630 08ed14f15de4c217837783fb253703cb 317 Gene3D G3DSA:3.50.50.60 234 313 5.0E-9 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS08630 08ed14f15de4c217837783fb253703cb 317 Gene3D G3DSA:3.50.50.60 119 233 3.6E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS08630 08ed14f15de4c217837783fb253703cb 317 Gene3D G3DSA:3.50.50.60 4 118 4.6E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS08630 08ed14f15de4c217837783fb253703cb 317 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 299 1.5E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS08630 08ed14f15de4c217837783fb253703cb 317 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 312 2.4E-117 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 SCD_RS08630 08ed14f15de4c217837783fb253703cb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 275 293 6.5E-72 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SCD_RS08630 08ed14f15de4c217837783fb253703cb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 6.5E-72 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SCD_RS08630 08ed14f15de4c217837783fb253703cb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 214 6.5E-72 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SCD_RS08630 08ed14f15de4c217837783fb253703cb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 6.5E-72 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SCD_RS08630 08ed14f15de4c217837783fb253703cb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 6.5E-72 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SCD_RS08630 08ed14f15de4c217837783fb253703cb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 6.5E-72 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SCD_RS08630 08ed14f15de4c217837783fb253703cb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 6.5E-72 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SCD_RS08630 08ed14f15de4c217837783fb253703cb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 6.5E-72 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SCD_RS08630 08ed14f15de4c217837783fb253703cb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 6.5E-72 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SCD_RS01585 fcbdbd0e303f4cc6912497d45e53b1f3 440 Gene3D G3DSA:1.10.8.10 214 239 1.7E-29 T 22-04-2016 SCD_RS01585 fcbdbd0e303f4cc6912497d45e53b1f3 440 Gene3D G3DSA:1.10.8.10 111 168 1.7E-29 T 22-04-2016 SCD_RS01585 fcbdbd0e303f4cc6912497d45e53b1f3 440 SUPERFAMILY SSF52540 4 435 1.78E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS01585 fcbdbd0e303f4cc6912497d45e53b1f3 440 Gene3D G3DSA:1.10.8.60 332 440 3.8E-31 T 22-04-2016 SCD_RS01585 fcbdbd0e303f4cc6912497d45e53b1f3 440 SMART SM01086 332 428 2.4E-15 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SCD_RS01585 fcbdbd0e303f4cc6912497d45e53b1f3 440 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 107 1.1E-6 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SCD_RS01585 fcbdbd0e303f4cc6912497d45e53b1f3 440 SMART SM00382 49 329 8.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS01585 fcbdbd0e303f4cc6912497d45e53b1f3 440 PANTHER PTHR11262 215 440 7.8E-195 T 22-04-2016 SCD_RS01585 fcbdbd0e303f4cc6912497d45e53b1f3 440 PANTHER PTHR11262 4 105 7.8E-195 T 22-04-2016 SCD_RS01585 fcbdbd0e303f4cc6912497d45e53b1f3 440 Gene3D G3DSA:3.40.50.300 169 213 4.3E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS01585 fcbdbd0e303f4cc6912497d45e53b1f3 440 Pfam PF07724 AAA domain (Cdc48 subfamily) 169 326 1.8E-41 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SCD_RS01585 fcbdbd0e303f4cc6912497d45e53b1f3 440 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 440 42.583 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SCD_RS01585 fcbdbd0e303f4cc6912497d45e53b1f3 440 PANTHER PTHR11262:SF3 215 440 7.8E-195 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SCD_RS01585 fcbdbd0e303f4cc6912497d45e53b1f3 440 PANTHER PTHR11262:SF3 4 105 7.8E-195 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SCD_RS01585 fcbdbd0e303f4cc6912497d45e53b1f3 440 Gene3D G3DSA:3.40.50.300 3 110 1.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS01585 fcbdbd0e303f4cc6912497d45e53b1f3 440 Gene3D G3DSA:3.40.50.300 242 328 1.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS01585 fcbdbd0e303f4cc6912497d45e53b1f3 440 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 440 5.8E-204 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SCD_RS06840 36717226e076e19c7c2357bdb3d00f84 554 SUPERFAMILY SSF52540 300 516 2.59E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06840 36717226e076e19c7c2357bdb3d00f84 554 Gene3D G3DSA:3.40.50.300 320 535 4.3E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06840 36717226e076e19c7c2357bdb3d00f84 554 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 552 1.9E-288 T 22-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD SCD_RS06840 36717226e076e19c7c2357bdb3d00f84 554 SUPERFAMILY SSF52540 6 235 2.35E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06840 36717226e076e19c7c2357bdb3d00f84 554 Pfam PF00005 ABC transporter 339 472 3.0E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS06840 36717226e076e19c7c2357bdb3d00f84 554 Pfam PF00005 ABC transporter 23 190 1.9E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS06840 36717226e076e19c7c2357bdb3d00f84 554 PANTHER PTHR19211:SF7 1 554 0.0 T 22-04-2016 SCD_RS06840 36717226e076e19c7c2357bdb3d00f84 554 Pfam PF12848 ABC transporter 229 306 1.9E-11 T 22-04-2016 IPR032781 ABC-transporter extension domain SCD_RS06840 36717226e076e19c7c2357bdb3d00f84 554 SMART SM00382 347 521 6.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS06840 36717226e076e19c7c2357bdb3d00f84 554 SMART SM00382 31 235 4.9E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS06840 36717226e076e19c7c2357bdb3d00f84 554 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS06840 36717226e076e19c7c2357bdb3d00f84 554 Gene3D G3DSA:3.40.50.300 140 287 9.6E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06840 36717226e076e19c7c2357bdb3d00f84 554 Gene3D G3DSA:3.40.50.300 11 105 9.6E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06840 36717226e076e19c7c2357bdb3d00f84 554 PANTHER PTHR19211 1 554 0.0 T 22-04-2016 SCD_RS07590 61509e23c1890b861b90b7971bbc29d1 246 Gene3D G3DSA:3.40.50.720 2 245 2.3E-88 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS07590 61509e23c1890b861b90b7971bbc29d1 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.5E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS07590 61509e23c1890b861b90b7971bbc29d1 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.5E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS07590 61509e23c1890b861b90b7971bbc29d1 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.5E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS07590 61509e23c1890b861b90b7971bbc29d1 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 3.5E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS07590 61509e23c1890b861b90b7971bbc29d1 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.5E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS07590 61509e23c1890b861b90b7971bbc29d1 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.5E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS07590 61509e23c1890b861b90b7971bbc29d1 246 SUPERFAMILY SSF51735 3 245 2.18E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS07590 61509e23c1890b861b90b7971bbc29d1 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 243 6.9E-67 T 22-04-2016 SCD_RS07590 61509e23c1890b861b90b7971bbc29d1 246 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 7 244 2.0E-102 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SCD_RS07590 61509e23c1890b861b90b7971bbc29d1 246 PANTHER PTHR24322:SF635 9 137 2.6E-74 T 22-04-2016 SCD_RS07590 61509e23c1890b861b90b7971bbc29d1 246 PANTHER PTHR24322:SF635 153 185 2.6E-74 T 22-04-2016 SCD_RS07590 61509e23c1890b861b90b7971bbc29d1 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 188 1.4E-4 T 22-04-2016 SCD_RS07590 61509e23c1890b861b90b7971bbc29d1 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SCD_RS07590 61509e23c1890b861b90b7971bbc29d1 246 PANTHER PTHR24322 9 137 2.6E-74 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS07590 61509e23c1890b861b90b7971bbc29d1 246 PANTHER PTHR24322 153 185 2.6E-74 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS07590 61509e23c1890b861b90b7971bbc29d1 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.9E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS07590 61509e23c1890b861b90b7971bbc29d1 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.9E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS07590 61509e23c1890b861b90b7971bbc29d1 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.9E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS07280 77f760c46e23caaa1daef1a86add363d 1349 Gene3D G3DSA:3.30.1330.10 658 820 1.7E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SCD_RS07280 77f760c46e23caaa1daef1a86add363d 1349 Gene3D G3DSA:3.30.1330.10 213 433 3.0E-37 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SCD_RS07280 77f760c46e23caaa1daef1a86add363d 1349 SUPERFAMILY SSF82697 1 154 4.08E-43 T 22-04-2016 SCD_RS07280 77f760c46e23caaa1daef1a86add363d 1349 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 4 1348 0.0 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SCD_RS07280 77f760c46e23caaa1daef1a86add363d 1349 Pfam PF02769 AIR synthase related protein, C-terminal domain 850 1000 4.8E-13 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SCD_RS07280 77f760c46e23caaa1daef1a86add363d 1349 Pfam PF02769 AIR synthase related protein, C-terminal domain 444 600 6.4E-26 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SCD_RS07280 77f760c46e23caaa1daef1a86add363d 1349 SUPERFAMILY SSF109736 157 222 4.45E-22 T 22-04-2016 SCD_RS07280 77f760c46e23caaa1daef1a86add363d 1349 Gene3D G3DSA:3.40.50.880 1099 1332 8.2E-10 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SCD_RS07280 77f760c46e23caaa1daef1a86add363d 1349 SMART SM01211 1097 1348 1.5E-151 T 22-04-2016 SCD_RS07280 77f760c46e23caaa1daef1a86add363d 1349 SUPERFAMILY SSF52317 1095 1348 8.71E-95 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SCD_RS07280 77f760c46e23caaa1daef1a86add363d 1349 SUPERFAMILY SSF56042 837 1069 1.17E-52 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SCD_RS07280 77f760c46e23caaa1daef1a86add363d 1349 SUPERFAMILY SSF56042 442 667 1.44E-52 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SCD_RS07280 77f760c46e23caaa1daef1a86add363d 1349 SUPERFAMILY SSF55326 223 437 1.57E-60 T 22-04-2016 SCD_RS07280 77f760c46e23caaa1daef1a86add363d 1349 PANTHER PTHR10099 1 929 0.0 T 22-04-2016 SCD_RS07280 77f760c46e23caaa1daef1a86add363d 1349 PANTHER PTHR10099 1094 1349 0.0 T 22-04-2016 SCD_RS07280 77f760c46e23caaa1daef1a86add363d 1349 PANTHER PTHR10099 951 1072 0.0 T 22-04-2016 SCD_RS07280 77f760c46e23caaa1daef1a86add363d 1349 SUPERFAMILY SSF55326 631 828 6.8E-68 T 22-04-2016 SCD_RS07280 77f760c46e23caaa1daef1a86add363d 1349 PANTHER PTHR10099:SF5 1 929 0.0 T 22-04-2016 SCD_RS07280 77f760c46e23caaa1daef1a86add363d 1349 PANTHER PTHR10099:SF5 1094 1349 0.0 T 22-04-2016 SCD_RS07280 77f760c46e23caaa1daef1a86add363d 1349 PANTHER PTHR10099:SF5 951 1072 0.0 T 22-04-2016 SCD_RS07280 77f760c46e23caaa1daef1a86add363d 1349 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1097 1348 8.9E-106 T 22-04-2016 SCD_RS07280 77f760c46e23caaa1daef1a86add363d 1349 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1349 21.433 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SCD_RS00515 d929e5099eb11cbac240a8bb8969e4a8 283 Pfam PF01063 Amino-transferase class IV 28 249 5.8E-44 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SCD_RS00515 d929e5099eb11cbac240a8bb8969e4a8 283 PANTHER PTHR11825:SF38 1 279 3.4E-83 T 22-04-2016 SCD_RS00515 d929e5099eb11cbac240a8bb8969e4a8 283 Gene3D G3DSA:3.30.470.10 1 115 2.8E-39 T 22-04-2016 SCD_RS00515 d929e5099eb11cbac240a8bb8969e4a8 283 PANTHER PTHR11825 1 279 3.4E-83 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SCD_RS00515 d929e5099eb11cbac240a8bb8969e4a8 283 Gene3D G3DSA:3.20.10.10 121 274 3.9E-42 T 22-04-2016 SCD_RS00515 d929e5099eb11cbac240a8bb8969e4a8 283 SUPERFAMILY SSF56752 1 274 1.01E-77 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SCD_RS03540 c16242ade02025d72e902a46d41ff785 367 TIGRFAM TIGR00876 tal_mycobact: transaldolase 12 347 1.8E-81 T 22-04-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SCD_RS03540 c16242ade02025d72e902a46d41ff785 367 Pfam PF00923 Transaldolase 14 348 3.4E-71 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SCD_RS03540 c16242ade02025d72e902a46d41ff785 367 SUPERFAMILY SSF51569 1 353 2.32E-71 T 22-04-2016 SCD_RS03540 c16242ade02025d72e902a46d41ff785 367 PANTHER PTHR10683:SF12 1 351 2.8E-89 T 22-04-2016 SCD_RS03540 c16242ade02025d72e902a46d41ff785 367 Gene3D G3DSA:3.20.20.70 2 350 5.8E-98 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS03540 c16242ade02025d72e902a46d41ff785 367 Hamap MF_00493 Transaldolase [tal]. 1 360 125.32 T 22-04-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SCD_RS03540 c16242ade02025d72e902a46d41ff785 367 PANTHER PTHR10683 1 351 2.8E-89 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SCD_RS03540 c16242ade02025d72e902a46d41ff785 367 PIRSF PIRSF036915 1 361 4.1E-115 T 22-04-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SCD_RS08700 19ca0a018031a2503a8c1270c1f38f2d 230 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 3 229 30.907 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SCD_RS08700 19ca0a018031a2503a8c1270c1f38f2d 230 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 226 1.0E-66 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SCD_RS08700 19ca0a018031a2503a8c1270c1f38f2d 230 Gene3D G3DSA:3.90.550.10 2 226 2.4E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS08700 19ca0a018031a2503a8c1270c1f38f2d 230 SUPERFAMILY SSF53448 4 227 5.41E-57 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS08700 19ca0a018031a2503a8c1270c1f38f2d 230 PANTHER PTHR32125 1 226 5.1E-68 T 22-04-2016 SCD_RS08700 19ca0a018031a2503a8c1270c1f38f2d 230 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 104 111 - T 22-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SCD_RS08700 19ca0a018031a2503a8c1270c1f38f2d 230 PANTHER PTHR32125:SF4 1 226 5.1E-68 T 22-04-2016 SCD_RS08700 19ca0a018031a2503a8c1270c1f38f2d 230 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 227 1.9E-61 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SCD_RS06225 0aee8b01f1d835fda222cb1b0d5d317d 403 Gene3D G3DSA:3.90.1150.10 254 373 1.3E-49 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS06225 0aee8b01f1d835fda222cb1b0d5d317d 403 PIRSF PIRSF005572 3 383 2.6E-131 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SCD_RS06225 0aee8b01f1d835fda222cb1b0d5d317d 403 SUPERFAMILY SSF53383 4 389 8.91E-108 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS06225 0aee8b01f1d835fda222cb1b0d5d317d 403 Pfam PF00266 Aminotransferase class-V 6 366 3.7E-84 T 22-04-2016 IPR000192 Aminotransferase class V domain SCD_RS06225 0aee8b01f1d835fda222cb1b0d5d317d 403 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 2 394 53.635 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 SCD_RS06225 0aee8b01f1d835fda222cb1b0d5d317d 403 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 2 403 9.5E-224 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 SCD_RS06225 0aee8b01f1d835fda222cb1b0d5d317d 403 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 196 215 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SCD_RS06225 0aee8b01f1d835fda222cb1b0d5d317d 403 PANTHER PTHR11601:SF34 1 403 2.9E-225 T 22-04-2016 SCD_RS06225 0aee8b01f1d835fda222cb1b0d5d317d 403 Gene3D G3DSA:3.40.640.10 18 253 7.4E-95 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS06225 0aee8b01f1d835fda222cb1b0d5d317d 403 PANTHER PTHR11601 1 403 2.9E-225 T 22-04-2016 SCD_RS00500 b42ea7141d75b67ffa0c4104b98ca60a 368 Pfam PF01098 Cell cycle protein 21 364 6.2E-107 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SCD_RS00500 b42ea7141d75b67ffa0c4104b98ca60a 368 PANTHER PTHR30474:SF1 1 367 8.3E-145 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 SCD_RS00500 b42ea7141d75b67ffa0c4104b98ca60a 368 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 18 364 6.8E-132 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 SCD_RS00500 b42ea7141d75b67ffa0c4104b98ca60a 368 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 SCD_RS00500 b42ea7141d75b67ffa0c4104b98ca60a 368 PANTHER PTHR30474 1 367 8.3E-145 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SCD_RS11900 145f018f8ec59d3c24a7a07b9827665b 571 PANTHER PTHR11575:SF16 21 544 1.7E-173 T 22-04-2016 SCD_RS11900 145f018f8ec59d3c24a7a07b9827665b 571 Gene3D G3DSA:3.60.21.10 43 62 2.9E-82 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SCD_RS11900 145f018f8ec59d3c24a7a07b9827665b 571 Gene3D G3DSA:3.60.21.10 116 380 2.9E-82 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SCD_RS11900 145f018f8ec59d3c24a7a07b9827665b 571 PANTHER PTHR11575 21 544 1.7E-173 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SCD_RS11900 145f018f8ec59d3c24a7a07b9827665b 571 SUPERFAMILY SSF56300 40 62 4.2E-79 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SCD_RS11900 145f018f8ec59d3c24a7a07b9827665b 571 SUPERFAMILY SSF56300 116 380 4.2E-79 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SCD_RS11900 145f018f8ec59d3c24a7a07b9827665b 571 PRINTS PR01607 Apyrase family signature 43 61 3.7E-16 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SCD_RS11900 145f018f8ec59d3c24a7a07b9827665b 571 PRINTS PR01607 Apyrase family signature 287 310 3.7E-16 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SCD_RS11900 145f018f8ec59d3c24a7a07b9827665b 571 PRINTS PR01607 Apyrase family signature 319 339 3.7E-16 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SCD_RS11900 145f018f8ec59d3c24a7a07b9827665b 571 PRINTS PR01607 Apyrase family signature 268 285 3.7E-16 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SCD_RS11900 145f018f8ec59d3c24a7a07b9827665b 571 PRINTS PR01607 Apyrase family signature 513 532 3.7E-16 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SCD_RS11900 145f018f8ec59d3c24a7a07b9827665b 571 Gene3D G3DSA:3.90.780.10 387 554 4.8E-18 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SCD_RS11900 145f018f8ec59d3c24a7a07b9827665b 571 Pfam PF02872 5'-nucleotidase, C-terminal domain 398 534 6.0E-16 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SCD_RS11900 145f018f8ec59d3c24a7a07b9827665b 571 SUPERFAMILY SSF55816 379 560 6.93E-33 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SCD_RS11900 145f018f8ec59d3c24a7a07b9827665b 571 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 4 563 8.8E-269 T 22-04-2016 IPR030998 Thiosulfohydrolase SoxB SCD_RS02620 5ca8966b10ed7658652ccebefd85c6ff 75 PANTHER PTHR33279 1 74 1.6E-22 T 22-04-2016 SCD_RS02620 5ca8966b10ed7658652ccebefd85c6ff 75 Pfam PF01206 Sulfurtransferase TusA 5 74 3.7E-24 T 22-04-2016 IPR001455 TusA-like domain SCD_RS02620 5ca8966b10ed7658652ccebefd85c6ff 75 Gene3D G3DSA:3.30.110.40 1 74 2.1E-31 T 22-04-2016 IPR001455 TusA-like domain SCD_RS02620 5ca8966b10ed7658652ccebefd85c6ff 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 22-04-2016 IPR001455 TusA-like domain SCD_RS02620 5ca8966b10ed7658652ccebefd85c6ff 75 SUPERFAMILY SSF64307 3 74 1.96E-24 T 22-04-2016 IPR001455 TusA-like domain SCD_RS04110 88df8f1f1bc0f4d43962f3ddee0f03e3 404 Pfam PF03631 Virulence factor BrkB 21 269 1.3E-59 T 22-04-2016 IPR017039 Virulence factor BrkB SCD_RS04110 88df8f1f1bc0f4d43962f3ddee0f03e3 404 PANTHER PTHR30213:SF0 7 402 2.4E-91 T 22-04-2016 SCD_RS04110 88df8f1f1bc0f4d43962f3ddee0f03e3 404 Gene3D G3DSA:1.10.10.10 320 360 2.0E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS04110 88df8f1f1bc0f4d43962f3ddee0f03e3 404 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 11 270 1.5E-73 T 22-04-2016 IPR017039 Virulence factor BrkB SCD_RS04110 88df8f1f1bc0f4d43962f3ddee0f03e3 404 SUPERFAMILY SSF46785 293 361 3.54E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS04110 88df8f1f1bc0f4d43962f3ddee0f03e3 404 PANTHER PTHR30213 7 402 2.4E-91 T 22-04-2016 SCD_RS04110 88df8f1f1bc0f4d43962f3ddee0f03e3 404 Pfam PF02082 Transcriptional regulator 287 359 1.4E-6 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type SCD_RS04110 88df8f1f1bc0f4d43962f3ddee0f03e3 404 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 9 298 23.757 T 22-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial SCD_RS12130 76a2525a889ef6d30460ad775e5595fe 120 Pfam PF02152 Dihydroneopterin aldolase 4 112 1.0E-26 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SCD_RS12130 76a2525a889ef6d30460ad775e5595fe 120 TIGRFAM TIGR00526 folB_dom: FolB domain 1 116 3.7E-24 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SCD_RS12130 76a2525a889ef6d30460ad775e5595fe 120 Gene3D G3DSA:3.30.1130.10 1 114 4.3E-34 T 22-04-2016 SCD_RS12130 76a2525a889ef6d30460ad775e5595fe 120 PANTHER PTHR20941 1 118 9.0E-17 T 22-04-2016 SCD_RS12130 76a2525a889ef6d30460ad775e5595fe 120 SUPERFAMILY SSF55620 1 114 2.22E-31 T 22-04-2016 SCD_RS12130 76a2525a889ef6d30460ad775e5595fe 120 SMART SM00905 4 114 3.1E-35 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SCD_RS10045 f232f4ba5e5c94d2fdf5ead6f8950ee3 473 Gene3D G3DSA:3.30.70.150 16 141 7.3E-62 T 22-04-2016 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 SCD_RS10045 f232f4ba5e5c94d2fdf5ead6f8950ee3 473 SUPERFAMILY SSF54966 5 141 1.57E-56 T 22-04-2016 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 SCD_RS10045 f232f4ba5e5c94d2fdf5ead6f8950ee3 473 SUPERFAMILY SSF51649 142 466 3.66E-143 T 22-04-2016 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 SCD_RS10045 f232f4ba5e5c94d2fdf5ead6f8950ee3 473 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 189 197 - T 22-04-2016 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 SCD_RS10045 f232f4ba5e5c94d2fdf5ead6f8950ee3 473 Hamap MF_01338 Ribulose bisphosphate carboxylase large chain [rbcL]. 2 468 59.819 T 22-04-2016 IPR020888 Ribulose bisphosphate carboxylase, large subunit GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 SCD_RS10045 f232f4ba5e5c94d2fdf5ead6f8950ee3 473 Gene3D G3DSA:3.20.20.110 143 455 1.7E-174 T 22-04-2016 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 SCD_RS10045 f232f4ba5e5c94d2fdf5ead6f8950ee3 473 PANTHER PTHR23321:SF31 18 448 6.0E-296 T 22-04-2016 SCD_RS10045 f232f4ba5e5c94d2fdf5ead6f8950ee3 473 PANTHER PTHR23321 18 448 6.0E-296 T 22-04-2016 SCD_RS10045 f232f4ba5e5c94d2fdf5ead6f8950ee3 473 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 147 455 4.9E-129 T 22-04-2016 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 SCD_RS10045 f232f4ba5e5c94d2fdf5ead6f8950ee3 473 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 17 137 3.1E-43 T 22-04-2016 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 SCD_RS01105 9e520998e0b9c3ff0408ee0423bd413a 1231 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 944 1215 3.0E-128 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SCD_RS01105 9e520998e0b9c3ff0408ee0423bd413a 1231 SUPERFAMILY SSF51717 360 634 4.58E-90 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 SCD_RS01105 9e520998e0b9c3ff0408ee0423bd413a 1231 Pfam PF02574 Homocysteine S-methyltransferase 19 329 2.5E-92 T 22-04-2016 IPR003726 Homocysteine-binding domain SCD_RS01105 9e520998e0b9c3ff0408ee0423bd413a 1231 Gene3D G3DSA:1.10.1240.10 652 738 3.4E-36 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain SCD_RS01105 9e520998e0b9c3ff0408ee0423bd413a 1231 SUPERFAMILY SSF52242 749 899 6.28E-45 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SCD_RS01105 9e520998e0b9c3ff0408ee0423bd413a 1231 Pfam PF02310 B12 binding domain 753 846 4.2E-20 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SCD_RS01105 9e520998e0b9c3ff0408ee0423bd413a 1231 PANTHER PTHR21091:SF111 17 406 6.5E-174 T 22-04-2016 SCD_RS01105 9e520998e0b9c3ff0408ee0423bd413a 1231 SUPERFAMILY SSF56507 907 1231 5.62E-135 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SCD_RS01105 9e520998e0b9c3ff0408ee0423bd413a 1231 TIGRFAM TIGR02082 metH: methionine synthase 14 1198 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SCD_RS01105 9e520998e0b9c3ff0408ee0423bd413a 1231 Gene3D G3DSA:3.20.20.330 9 367 2.0E-126 T 22-04-2016 IPR003726 Homocysteine-binding domain SCD_RS01105 9e520998e0b9c3ff0408ee0423bd413a 1231 SUPERFAMILY SSF47644 653 740 5.75E-27 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain SCD_RS01105 9e520998e0b9c3ff0408ee0423bd413a 1231 Gene3D G3DSA:3.10.196.10 963 1231 1.9E-112 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SCD_RS01105 9e520998e0b9c3ff0408ee0423bd413a 1231 Pfam PF00809 Pterin binding enzyme 364 602 4.9E-60 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 SCD_RS01105 9e520998e0b9c3ff0408ee0423bd413a 1231 Gene3D G3DSA:3.40.50.280 749 899 2.0E-64 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SCD_RS01105 9e520998e0b9c3ff0408ee0423bd413a 1231 SUPERFAMILY SSF82282 10 403 2.75E-116 T 22-04-2016 IPR003726 Homocysteine-binding domain SCD_RS01105 9e520998e0b9c3ff0408ee0423bd413a 1231 PANTHER PTHR21091 17 406 6.5E-174 T 22-04-2016 SCD_RS01105 9e520998e0b9c3ff0408ee0423bd413a 1231 SMART SM01018 658 741 3.0E-41 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain SCD_RS01105 9e520998e0b9c3ff0408ee0423bd413a 1231 Pfam PF02607 B12 binding domain 662 733 1.5E-24 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain SCD_RS01105 9e520998e0b9c3ff0408ee0423bd413a 1231 Gene3D G3DSA:3.20.20.20 368 640 5.6E-116 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 SCD_RS01105 9e520998e0b9c3ff0408ee0423bd413a 1231 PIRSF PIRSF000381 3 1202 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SCD_RS06170 d576b81f0791041264fa74dedcaeaf21 254 SMART SM00849 11 188 1.5E-9 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS06170 d576b81f0791041264fa74dedcaeaf21 254 SUPERFAMILY SSF56281 1 225 1.52E-42 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS06170 d576b81f0791041264fa74dedcaeaf21 254 PANTHER PTHR13754 1 254 6.8E-65 T 22-04-2016 SCD_RS06170 d576b81f0791041264fa74dedcaeaf21 254 Gene3D G3DSA:3.60.15.10 1 227 2.2E-36 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS06170 d576b81f0791041264fa74dedcaeaf21 254 PANTHER PTHR13754:SF15 1 254 6.8E-65 T 22-04-2016 SCD_RS06170 d576b81f0791041264fa74dedcaeaf21 254 Pfam PF12706 Beta-lactamase superfamily domain 22 204 6.3E-22 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS10770 3b83041f0717a11ee63974ec1ee60324 599 SUPERFAMILY SSF90123 25 344 2.62E-66 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SCD_RS10770 3b83041f0717a11ee63974ec1ee60324 599 Pfam PF00664 ABC transporter transmembrane region 37 310 1.5E-39 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SCD_RS10770 3b83041f0717a11ee63974ec1ee60324 599 Gene3D G3DSA:3.40.50.300 356 587 3.8E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS10770 3b83041f0717a11ee63974ec1ee60324 599 Gene3D G3DSA:1.20.1560.10 25 341 6.5E-68 T 22-04-2016 SCD_RS10770 3b83041f0717a11ee63974ec1ee60324 599 PANTHER PTHR24221:SF250 21 598 0.0 T 22-04-2016 SCD_RS10770 3b83041f0717a11ee63974ec1ee60324 599 PANTHER PTHR24221 21 598 0.0 T 22-04-2016 SCD_RS10770 3b83041f0717a11ee63974ec1ee60324 599 Pfam PF00005 ABC transporter 372 521 1.3E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS10770 3b83041f0717a11ee63974ec1ee60324 599 SMART SM00382 381 567 2.4E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS10770 3b83041f0717a11ee63974ec1ee60324 599 SUPERFAMILY SSF52540 346 591 4.02E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS10770 3b83041f0717a11ee63974ec1ee60324 599 ProSitePatterns PS00211 ABC transporters family signature. 493 507 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS13085 0c5bb3504d4901bf63459e34a4b7cb32 479 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 29 472 1.7E-132 T 22-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 SCD_RS13085 0c5bb3504d4901bf63459e34a4b7cb32 479 PANTHER PTHR24960:SF45 1 247 3.2E-99 T 22-04-2016 SCD_RS13085 0c5bb3504d4901bf63459e34a4b7cb32 479 PANTHER PTHR24960:SF45 263 397 3.2E-99 T 22-04-2016 SCD_RS13085 0c5bb3504d4901bf63459e34a4b7cb32 479 Pfam PF13746 4Fe-4S dicluster domain 211 324 2.6E-51 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS13085 0c5bb3504d4901bf63459e34a4b7cb32 479 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 271 282 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS13085 0c5bb3504d4901bf63459e34a4b7cb32 479 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 358 474 1.3E-21 T 22-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain SCD_RS13085 0c5bb3504d4901bf63459e34a4b7cb32 479 Gene3D G3DSA:1.10.1060.10 215 279 3.8E-8 T 22-04-2016 SCD_RS13085 0c5bb3504d4901bf63459e34a4b7cb32 479 Gene3D G3DSA:2.60.40.10 358 475 7.8E-23 T 22-04-2016 IPR013783 Immunoglobulin-like fold SCD_RS13085 0c5bb3504d4901bf63459e34a4b7cb32 479 SUPERFAMILY SSF54862 166 243 2.86E-28 T 22-04-2016 SCD_RS13085 0c5bb3504d4901bf63459e34a4b7cb32 479 SUPERFAMILY SSF54862 271 356 2.86E-28 T 22-04-2016 SCD_RS13085 0c5bb3504d4901bf63459e34a4b7cb32 479 SUPERFAMILY SSF54862 97 120 2.86E-28 T 22-04-2016 SCD_RS13085 0c5bb3504d4901bf63459e34a4b7cb32 479 PANTHER PTHR24960 1 247 3.2E-99 T 22-04-2016 SCD_RS13085 0c5bb3504d4901bf63459e34a4b7cb32 479 PANTHER PTHR24960 263 397 3.2E-99 T 22-04-2016 SCD_RS13085 0c5bb3504d4901bf63459e34a4b7cb32 479 Gene3D G3DSA:3.30.70.20 280 327 2.2E-8 T 22-04-2016 SCD_RS13085 0c5bb3504d4901bf63459e34a4b7cb32 479 Pfam PF12801 4Fe-4S binding domain 88 123 1.2E-5 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS14490 b430c1c09fce481fb34577633b8d51b9 211 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 5 197 1.8E-57 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SCD_RS14490 b430c1c09fce481fb34577633b8d51b9 211 PANTHER PTHR20857:SF15 5 204 4.0E-56 T 22-04-2016 SCD_RS14490 b430c1c09fce481fb34577633b8d51b9 211 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 3 203 26.507 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SCD_RS14490 b430c1c09fce481fb34577633b8d51b9 211 PANTHER PTHR20857 5 204 4.0E-56 T 22-04-2016 SCD_RS14490 b430c1c09fce481fb34577633b8d51b9 211 Gene3D G3DSA:3.20.20.70 4 204 5.4E-60 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS14490 b430c1c09fce481fb34577633b8d51b9 211 SUPERFAMILY SSF51391 4 199 7.59E-61 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SCD_RS14490 b430c1c09fce481fb34577633b8d51b9 211 Pfam PF02581 Thiamine monophosphate synthase/TENI 5 185 2.9E-55 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SCD_RS04105 e9885bc090baf641e0be606050c66b53 234 PANTHER PTHR13343 9 231 3.7E-33 T 22-04-2016 SCD_RS04105 e9885bc090baf641e0be606050c66b53 234 Gene3D G3DSA:2.30.110.10 9 147 6.8E-46 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SCD_RS04105 e9885bc090baf641e0be606050c66b53 234 Pfam PF13883 Pyridoxamine 5'-phosphate oxidase 9 145 3.4E-16 T 22-04-2016 SCD_RS04105 e9885bc090baf641e0be606050c66b53 234 SUPERFAMILY SSF50475 9 230 1.16E-40 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SCD_RS04105 e9885bc090baf641e0be606050c66b53 234 Gene3D G3DSA:3.20.180.10 152 231 2.8E-12 T 22-04-2016 IPR019595 Domain of unknown function DUF2470 SCD_RS04105 e9885bc090baf641e0be606050c66b53 234 PANTHER PTHR13343:SF4 9 231 3.7E-33 T 22-04-2016 SCD_RS10170 dfa56248ee28f4ba6de9e1d883da4746 252 Pfam PF01479 S4 domain 14 58 1.1E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS10170 dfa56248ee28f4ba6de9e1d883da4746 252 Gene3D G3DSA:3.10.290.10 12 65 1.1E-17 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS10170 dfa56248ee28f4ba6de9e1d883da4746 252 SUPERFAMILY SSF55120 74 250 1.41E-38 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS10170 dfa56248ee28f4ba6de9e1d883da4746 252 Pfam PF00849 RNA pseudouridylate synthase 75 216 2.8E-13 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS10170 dfa56248ee28f4ba6de9e1d883da4746 252 SUPERFAMILY SSF55174 12 95 7.98E-16 T 22-04-2016 SCD_RS10170 dfa56248ee28f4ba6de9e1d883da4746 252 PANTHER PTHR21600:SF25 13 250 2.7E-81 T 22-04-2016 SCD_RS10170 dfa56248ee28f4ba6de9e1d883da4746 252 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 118 246 4.3E-40 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SCD_RS10170 dfa56248ee28f4ba6de9e1d883da4746 252 PANTHER PTHR21600 13 250 2.7E-81 T 22-04-2016 SCD_RS10170 dfa56248ee28f4ba6de9e1d883da4746 252 SMART SM00363 13 70 2.5E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS07465 41e77dadd2d8cd90485896aed8dbabee 314 SUPERFAMILY SSF53335 7 299 3.4E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS07465 41e77dadd2d8cd90485896aed8dbabee 314 PANTHER PTHR18895 13 312 4.0E-118 T 22-04-2016 SCD_RS07465 41e77dadd2d8cd90485896aed8dbabee 314 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 106 275 1.2E-28 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 SCD_RS07465 41e77dadd2d8cd90485896aed8dbabee 314 PANTHER PTHR18895:SF61 13 312 4.0E-118 T 22-04-2016 SCD_RS07465 41e77dadd2d8cd90485896aed8dbabee 314 Gene3D G3DSA:3.40.50.150 44 312 1.2E-76 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS15940 bf573ac7b0da6fa7a2b7b040cafaba7c 332 PANTHER PTHR22916 1 307 1.2E-50 T 22-04-2016 SCD_RS15940 bf573ac7b0da6fa7a2b7b040cafaba7c 332 Pfam PF00535 Glycosyl transferase family 2 12 168 7.0E-31 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SCD_RS15940 bf573ac7b0da6fa7a2b7b040cafaba7c 332 SUPERFAMILY SSF53448 9 217 4.57E-58 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS15940 bf573ac7b0da6fa7a2b7b040cafaba7c 332 Gene3D G3DSA:3.90.550.10 9 212 7.0E-55 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS06060 a793937dce647717a9bfd52a64787328 317 Pfam PF00072 Response regulator receiver domain 185 306 1.3E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS06060 a793937dce647717a9bfd52a64787328 317 PANTHER PTHR22617 1 176 4.8E-40 T 22-04-2016 SCD_RS06060 a793937dce647717a9bfd52a64787328 317 Gene3D G3DSA:2.40.50.180 67 110 3.6E-4 T 22-04-2016 SCD_RS06060 a793937dce647717a9bfd52a64787328 317 Pfam PF01584 CheW-like domain 22 162 9.9E-34 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SCD_RS06060 a793937dce647717a9bfd52a64787328 317 SMART SM00260 17 160 2.2E-24 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SCD_RS06060 a793937dce647717a9bfd52a64787328 317 PIRSF PIRSF002867 1 315 8.1E-105 T 22-04-2016 IPR024181 Chemotaxis response regulator CheV SCD_RS06060 a793937dce647717a9bfd52a64787328 317 PANTHER PTHR22617:SF37 1 176 4.8E-40 T 22-04-2016 SCD_RS06060 a793937dce647717a9bfd52a64787328 317 Gene3D G3DSA:3.40.50.2300 181 313 2.5E-26 T 22-04-2016 SCD_RS06060 a793937dce647717a9bfd52a64787328 317 SUPERFAMILY SSF52172 180 312 1.57E-23 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS06060 a793937dce647717a9bfd52a64787328 317 SUPERFAMILY SSF50341 16 163 5.49E-29 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SCD_RS06060 a793937dce647717a9bfd52a64787328 317 SMART SM00448 183 308 1.3E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS14465 e29b64cfc6d8451f6837104d2918b652 717 Gene3D G3DSA:1.10.287.950 469 686 3.1E-53 T 22-04-2016 SCD_RS14465 e29b64cfc6d8451f6837104d2918b652 717 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 96 182 5.7E-11 T 22-04-2016 IPR029095 NarX-like, N-terminal SCD_RS14465 e29b64cfc6d8451f6837104d2918b652 717 SMART SM00283 454 715 5.2E-86 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SCD_RS14465 e29b64cfc6d8451f6837104d2918b652 717 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 509 714 1.3E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SCD_RS14465 e29b64cfc6d8451f6837104d2918b652 717 PANTHER PTHR32089 394 717 8.0E-111 T 22-04-2016 SCD_RS14465 e29b64cfc6d8451f6837104d2918b652 717 PANTHER PTHR32089:SF43 394 717 8.0E-111 T 22-04-2016 SCD_RS14465 e29b64cfc6d8451f6837104d2918b652 717 SUPERFAMILY SSF58104 416 716 7.41E-69 T 22-04-2016 SCD_RS11845 8dd5cc1e1983420870428a63879674d0 459 PANTHER PTHR22916 116 309 1.0E-13 T 22-04-2016 SCD_RS11845 8dd5cc1e1983420870428a63879674d0 459 PANTHER PTHR22916 327 418 1.0E-13 T 22-04-2016 SCD_RS11845 8dd5cc1e1983420870428a63879674d0 459 SUPERFAMILY SSF53448 170 396 9.64E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS11845 8dd5cc1e1983420870428a63879674d0 459 Pfam PF00535 Glycosyl transferase family 2 181 346 7.5E-13 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SCD_RS11845 8dd5cc1e1983420870428a63879674d0 459 Gene3D G3DSA:3.90.550.10 169 394 2.1E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS00305 38a9d8cdfd7baddde3181c99c00af16a 156 PANTHER PTHR33603:SF1 1 155 3.0E-55 T 22-04-2016 SCD_RS00305 38a9d8cdfd7baddde3181c99c00af16a 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 1.7E-48 T 22-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SCD_RS00305 38a9d8cdfd7baddde3181c99c00af16a 156 PIRSF PIRSF004505 1 155 4.0E-46 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SCD_RS00305 38a9d8cdfd7baddde3181c99c00af16a 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 28.868 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SCD_RS00305 38a9d8cdfd7baddde3181c99c00af16a 156 SUPERFAMILY SSF75217 2 153 5.23E-50 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SCD_RS00305 38a9d8cdfd7baddde3181c99c00af16a 156 PANTHER PTHR33603 1 155 3.0E-55 T 22-04-2016 SCD_RS00305 38a9d8cdfd7baddde3181c99c00af16a 156 Gene3D G3DSA:3.40.1280.10 2 155 1.2E-54 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SCD_RS00305 38a9d8cdfd7baddde3181c99c00af16a 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 2.3E-50 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 Pfam PF08448 PAS fold 12 123 4.4E-17 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 SMART SM00091 133 207 0.32 T 22-04-2016 IPR000014 PAS domain SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 SMART SM00091 261 327 9.3E-8 T 22-04-2016 IPR000014 PAS domain SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 SMART SM00091 6 73 1.8E-11 T 22-04-2016 IPR000014 PAS domain SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 Gene3D G3DSA:3.30.450.20 117 246 2.1E-22 T 22-04-2016 SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 Gene3D G3DSA:3.30.450.20 247 378 3.4E-28 T 22-04-2016 SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 388 550 1.8E-50 T 22-04-2016 IPR000160 GGDEF domain SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 SUPERFAMILY SSF55785 19 129 2.93E-25 T 22-04-2016 IPR000014 PAS domain SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 SUPERFAMILY SSF55785 246 378 2.44E-28 T 22-04-2016 IPR000014 PAS domain SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 SMART SM00086 209 249 37.0 T 22-04-2016 IPR001610 PAC motif SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 SMART SM00086 79 121 2.1E-4 T 22-04-2016 IPR001610 PAC motif SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 SMART SM00086 339 380 7.6E-4 T 22-04-2016 IPR001610 PAC motif SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 Gene3D G3DSA:3.30.70.270 392 554 1.4E-61 T 22-04-2016 SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 Pfam PF00990 Diguanylate cyclase, GGDEF domain 391 547 4.0E-54 T 22-04-2016 IPR000160 GGDEF domain SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 Gene3D G3DSA:3.30.450.20 3 113 1.7E-25 T 22-04-2016 SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 SMART SM00267 380 552 6.1E-71 T 22-04-2016 IPR000160 GGDEF domain SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 257 386 4.2E-23 T 22-04-2016 IPR000014 PAS domain SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 9 128 7.1E-22 T 22-04-2016 IPR000014 PAS domain SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 129 256 2.0E-15 T 22-04-2016 IPR000014 PAS domain SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 PANTHER PTHR10799:SF774 366 547 1.1E-49 T 22-04-2016 SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 SUPERFAMILY SSF55073 396 553 3.53E-55 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 Pfam PF00989 PAS fold 262 377 2.5E-12 T 22-04-2016 IPR013767 PAS fold GO:0006355 SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 SUPERFAMILY SSF55785 118 247 2.69E-19 T 22-04-2016 IPR000014 PAS domain SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 Pfam PF13426 PAS domain 158 248 6.3E-7 T 22-04-2016 IPR000014 PAS domain SCD_RS00940 70231de7e9e3bac6d790dc0993e2678f 555 PANTHER PTHR10799 366 547 1.1E-49 T 22-04-2016 SCD_RS04215 6d0b2142b9e57de1a78f7420c853954b 146 Pfam PF02631 RecX family 34 142 2.0E-28 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 SCD_RS04215 6d0b2142b9e57de1a78f7420c853954b 146 Gene3D G3DSA:1.10.10.10 99 145 2.9E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS04215 6d0b2142b9e57de1a78f7420c853954b 146 Hamap MF_01114 Regulatory protein RecX [recX]. 1 146 13.551 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 SCD_RS04215 6d0b2142b9e57de1a78f7420c853954b 146 PANTHER PTHR33602 6 142 1.0E-25 T 22-04-2016 SCD_RS04215 6d0b2142b9e57de1a78f7420c853954b 146 PANTHER PTHR33602:SF1 6 142 1.0E-25 T 22-04-2016 SCD_RS04215 6d0b2142b9e57de1a78f7420c853954b 146 Gene3D G3DSA:1.10.10.10 5 51 2.2E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS04215 6d0b2142b9e57de1a78f7420c853954b 146 Gene3D G3DSA:1.10.10.10 52 93 2.6E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS10510 c49a6533eb0e83d0491e1d5ef97ef89a 173 Pfam PF13633 Prokaryotic N-terminal methylation site 9 35 1.5E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS10510 c49a6533eb0e83d0491e1d5ef97ef89a 173 Gene3D G3DSA:3.30.700.10 12 117 6.4E-12 T 22-04-2016 SCD_RS10510 c49a6533eb0e83d0491e1d5ef97ef89a 173 SUPERFAMILY SSF54523 12 123 4.0E-17 T 22-04-2016 SCD_RS10510 c49a6533eb0e83d0491e1d5ef97ef89a 173 Pfam PF12019 Type II transport protein GspH 48 153 1.6E-10 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 SCD_RS10510 c49a6533eb0e83d0491e1d5ef97ef89a 173 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 6.1E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS10510 c49a6533eb0e83d0491e1d5ef97ef89a 173 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS10830 2ef9c938bdae93c821464cd6bf071194 345 Gene3D G3DSA:3.10.20.30 3 91 5.9E-24 T 22-04-2016 IPR012675 Beta-grasp domain SCD_RS10830 2ef9c938bdae93c821464cd6bf071194 345 Gene3D G3DSA:3.40.50.80 202 340 2.4E-15 T 22-04-2016 SCD_RS10830 2ef9c938bdae93c821464cd6bf071194 345 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SCD_RS10830 2ef9c938bdae93c821464cd6bf071194 345 Pfam PF00970 Oxidoreductase FAD-binding domain 105 197 5.8E-13 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain SCD_RS10830 2ef9c938bdae93c821464cd6bf071194 345 SUPERFAMILY SSF54292 2 89 1.31E-20 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SCD_RS10830 2ef9c938bdae93c821464cd6bf071194 345 Gene3D G3DSA:2.40.30.10 103 198 2.2E-20 T 22-04-2016 SCD_RS10830 2ef9c938bdae93c821464cd6bf071194 345 PRINTS PR00410 Phenol hydroxylase reductase family signature 208 227 6.4E-9 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SCD_RS10830 2ef9c938bdae93c821464cd6bf071194 345 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 6.4E-9 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SCD_RS10830 2ef9c938bdae93c821464cd6bf071194 345 PRINTS PR00410 Phenol hydroxylase reductase family signature 192 201 6.4E-9 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SCD_RS10830 2ef9c938bdae93c821464cd6bf071194 345 SUPERFAMILY SSF52343 187 340 3.54E-17 T 22-04-2016 SCD_RS10830 2ef9c938bdae93c821464cd6bf071194 345 SUPERFAMILY SSF63380 103 198 1.79E-19 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SCD_RS10830 2ef9c938bdae93c821464cd6bf071194 345 PANTHER PTHR19370:SF32 36 265 3.1E-22 T 22-04-2016 SCD_RS10830 2ef9c938bdae93c821464cd6bf071194 345 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 78 4.2E-9 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SCD_RS10830 2ef9c938bdae93c821464cd6bf071194 345 PANTHER PTHR19370 36 265 3.1E-22 T 22-04-2016 SCD_RS04165 cdd4204c6e306f210da97110279dfd5a 149 PANTHER PTHR30455:SF2 2 149 7.1E-65 T 22-04-2016 SCD_RS04165 cdd4204c6e306f210da97110279dfd5a 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 84.9 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 SCD_RS04165 cdd4204c6e306f210da97110279dfd5a 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 3.7E-59 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 SCD_RS04165 cdd4204c6e306f210da97110279dfd5a 149 Pfam PF03477 ATP cone domain 50 136 3.2E-16 T 22-04-2016 IPR005144 ATP-cone domain SCD_RS04165 cdd4204c6e306f210da97110279dfd5a 149 PANTHER PTHR30455 2 149 7.1E-65 T 22-04-2016 SCD_RS03360 c30e94d110854f393f5ecf07b6a9e9bb 266 TIGRFAM TIGR02794 tolA_full: protein TolA 101 264 7.0E-18 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 SCD_RS03360 c30e94d110854f393f5ecf07b6a9e9bb 266 Pfam PF13103 TonB C terminal 181 247 2.7E-17 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SCD_RS03360 c30e94d110854f393f5ecf07b6a9e9bb 266 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 211 247 1.9E-7 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SCD_RS03360 c30e94d110854f393f5ecf07b6a9e9bb 266 SUPERFAMILY SSF74653 166 265 1.83E-16 T 22-04-2016 SCD_RS03360 c30e94d110854f393f5ecf07b6a9e9bb 266 SUPERFAMILY SSF74653 73 85 1.83E-16 T 22-04-2016 SCD_RS03360 c30e94d110854f393f5ecf07b6a9e9bb 266 Gene3D G3DSA:3.30.1150.10 155 265 2.0E-24 T 22-04-2016 SCD_RS07980 a78f759d5fa164d0c3505c6020fee3d2 553 PANTHER PTHR11550 1 539 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SCD_RS07980 a78f759d5fa164d0c3505c6020fee3d2 553 TIGRFAM TIGR00337 PyrG: CTP synthase 1 535 2.1E-246 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SCD_RS07980 a78f759d5fa164d0c3505c6020fee3d2 553 Gene3D G3DSA:3.40.50.880 286 540 4.0E-93 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SCD_RS07980 a78f759d5fa164d0c3505c6020fee3d2 553 Gene3D G3DSA:3.40.50.300 1 279 1.4E-132 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07980 a78f759d5fa164d0c3505c6020fee3d2 553 SUPERFAMILY SSF52540 1 267 1.55E-122 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07980 a78f759d5fa164d0c3505c6020fee3d2 553 Pfam PF00117 Glutamine amidotransferase class-I 300 534 4.4E-59 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SCD_RS07980 a78f759d5fa164d0c3505c6020fee3d2 553 Hamap MF_01227 CTP synthase [pyrG]. 2 540 50.758 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SCD_RS07980 a78f759d5fa164d0c3505c6020fee3d2 553 Pfam PF06418 CTP synthase N-terminus 3 265 1.6E-126 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SCD_RS07980 a78f759d5fa164d0c3505c6020fee3d2 553 SUPERFAMILY SSF52317 287 539 2.07E-83 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SCD_RS03095 e772f09130710ce6accd541fcc71ed3b 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.1E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal SCD_RS03095 e772f09130710ce6accd541fcc71ed3b 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 9.8E-229 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SCD_RS03095 e772f09130710ce6accd541fcc71ed3b 396 Gene3D G3DSA:2.40.30.10 302 395 1.3E-46 T 22-04-2016 SCD_RS03095 e772f09130710ce6accd541fcc71ed3b 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SCD_RS03095 e772f09130710ce6accd541fcc71ed3b 396 SUPERFAMILY SSF52540 5 221 1.02E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03095 e772f09130710ce6accd541fcc71ed3b 396 Gene3D G3DSA:2.40.30.10 214 300 6.8E-36 T 22-04-2016 SCD_RS03095 e772f09130710ce6accd541fcc71ed3b 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 5.7E-59 T 22-04-2016 SCD_RS03095 e772f09130710ce6accd541fcc71ed3b 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 1.2E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SCD_RS03095 e772f09130710ce6accd541fcc71ed3b 396 Gene3D G3DSA:3.40.50.300 5 213 1.0E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03095 e772f09130710ce6accd541fcc71ed3b 396 PANTHER PTHR23115 1 395 2.2E-268 T 22-04-2016 SCD_RS03095 e772f09130710ce6accd541fcc71ed3b 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.7E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS03095 e772f09130710ce6accd541fcc71ed3b 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.7E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS03095 e772f09130710ce6accd541fcc71ed3b 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.7E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS03095 e772f09130710ce6accd541fcc71ed3b 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.7E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS03095 e772f09130710ce6accd541fcc71ed3b 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.7E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS03095 e772f09130710ce6accd541fcc71ed3b 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 1.5E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SCD_RS03095 e772f09130710ce6accd541fcc71ed3b 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.742 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SCD_RS03095 e772f09130710ce6accd541fcc71ed3b 396 SUPERFAMILY SSF50447 207 303 1.57E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SCD_RS03095 e772f09130710ce6accd541fcc71ed3b 396 SUPERFAMILY SSF50465 304 396 6.33E-36 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SCD_RS03095 e772f09130710ce6accd541fcc71ed3b 396 PANTHER PTHR23115:SF151 1 395 2.2E-268 T 22-04-2016 SCD_RS03030 e772f09130710ce6accd541fcc71ed3b 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.1E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal SCD_RS03030 e772f09130710ce6accd541fcc71ed3b 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 9.8E-229 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SCD_RS03030 e772f09130710ce6accd541fcc71ed3b 396 Gene3D G3DSA:2.40.30.10 302 395 1.3E-46 T 22-04-2016 SCD_RS03030 e772f09130710ce6accd541fcc71ed3b 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SCD_RS03030 e772f09130710ce6accd541fcc71ed3b 396 SUPERFAMILY SSF52540 5 221 1.02E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03030 e772f09130710ce6accd541fcc71ed3b 396 Gene3D G3DSA:2.40.30.10 214 300 6.8E-36 T 22-04-2016 SCD_RS03030 e772f09130710ce6accd541fcc71ed3b 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 5.7E-59 T 22-04-2016 SCD_RS03030 e772f09130710ce6accd541fcc71ed3b 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 1.2E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SCD_RS03030 e772f09130710ce6accd541fcc71ed3b 396 Gene3D G3DSA:3.40.50.300 5 213 1.0E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03030 e772f09130710ce6accd541fcc71ed3b 396 PANTHER PTHR23115 1 395 2.2E-268 T 22-04-2016 SCD_RS03030 e772f09130710ce6accd541fcc71ed3b 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.7E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS03030 e772f09130710ce6accd541fcc71ed3b 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.7E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS03030 e772f09130710ce6accd541fcc71ed3b 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.7E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS03030 e772f09130710ce6accd541fcc71ed3b 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.7E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS03030 e772f09130710ce6accd541fcc71ed3b 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.7E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS03030 e772f09130710ce6accd541fcc71ed3b 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 1.5E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SCD_RS03030 e772f09130710ce6accd541fcc71ed3b 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.742 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SCD_RS03030 e772f09130710ce6accd541fcc71ed3b 396 SUPERFAMILY SSF50447 207 303 1.57E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SCD_RS03030 e772f09130710ce6accd541fcc71ed3b 396 SUPERFAMILY SSF50465 304 396 6.33E-36 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SCD_RS03030 e772f09130710ce6accd541fcc71ed3b 396 PANTHER PTHR23115:SF151 1 395 2.2E-268 T 22-04-2016 SCD_RS12190 0aae5b2a3b5b715540ec3be198412d7d 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 5.5E-18 T 22-04-2016 IPR003004 GspF/PilC family SCD_RS12190 0aae5b2a3b5b715540ec3be198412d7d 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 5.5E-18 T 22-04-2016 IPR003004 GspF/PilC family SCD_RS12190 0aae5b2a3b5b715540ec3be198412d7d 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 5.5E-18 T 22-04-2016 IPR003004 GspF/PilC family SCD_RS12190 0aae5b2a3b5b715540ec3be198412d7d 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 5.5E-18 T 22-04-2016 IPR003004 GspF/PilC family SCD_RS12190 0aae5b2a3b5b715540ec3be198412d7d 406 Pfam PF00482 Type II secretion system (T2SS), protein F 276 398 3.3E-29 T 22-04-2016 IPR018076 Type II secretion system F domain SCD_RS12190 0aae5b2a3b5b715540ec3be198412d7d 406 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 3.9E-31 T 22-04-2016 IPR018076 Type II secretion system F domain SCD_RS12190 0aae5b2a3b5b715540ec3be198412d7d 406 PANTHER PTHR30012:SF0 13 406 1.6E-152 T 22-04-2016 SCD_RS12190 0aae5b2a3b5b715540ec3be198412d7d 406 PANTHER PTHR30012 13 406 1.6E-152 T 22-04-2016 SCD_RS09870 60ff5dacb1d4f44055795d27e09a9f83 215 Pfam PF00571 CBS domain 84 136 4.5E-8 T 22-04-2016 IPR000644 CBS domain SCD_RS09870 60ff5dacb1d4f44055795d27e09a9f83 215 Pfam PF00571 CBS domain 151 205 7.2E-10 T 22-04-2016 IPR000644 CBS domain SCD_RS09870 60ff5dacb1d4f44055795d27e09a9f83 215 Gene3D G3DSA:3.10.580.10 80 206 4.9E-28 T 22-04-2016 SCD_RS09870 60ff5dacb1d4f44055795d27e09a9f83 215 PANTHER PTHR11911 75 207 6.5E-25 T 22-04-2016 SCD_RS09870 60ff5dacb1d4f44055795d27e09a9f83 215 SUPERFAMILY SSF54631 81 206 3.66E-26 T 22-04-2016 SCD_RS09870 60ff5dacb1d4f44055795d27e09a9f83 215 SMART SM00116 89 137 1.2E-5 T 22-04-2016 IPR000644 CBS domain SCD_RS09870 60ff5dacb1d4f44055795d27e09a9f83 215 SMART SM00116 158 206 2.0E-7 T 22-04-2016 IPR000644 CBS domain SCD_RS10095 a42b9f4ab41677a58478a0eb226704da 373 SUPERFAMILY SSF56059 103 301 3.71E-60 T 22-04-2016 SCD_RS10095 a42b9f4ab41677a58478a0eb226704da 373 SUPERFAMILY SSF51246 305 367 4.32E-17 T 22-04-2016 IPR011054 Rudiment single hybrid motif SCD_RS10095 a42b9f4ab41677a58478a0eb226704da 373 SUPERFAMILY SSF52440 7 100 6.91E-24 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SCD_RS10095 a42b9f4ab41677a58478a0eb226704da 373 Gene3D G3DSA:3.40.50.20 2 111 3.8E-32 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SCD_RS10095 a42b9f4ab41677a58478a0eb226704da 373 PANTHER PTHR11609:SF5 1 363 3.7E-134 T 22-04-2016 SCD_RS10095 a42b9f4ab41677a58478a0eb226704da 373 Pfam PF02222 ATP-grasp domain 111 281 1.5E-54 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 SCD_RS10095 a42b9f4ab41677a58478a0eb226704da 373 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 7 363 8.7E-121 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 SCD_RS10095 a42b9f4ab41677a58478a0eb226704da 373 Gene3D G3DSA:3.30.1490.20 118 180 8.1E-20 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SCD_RS10095 a42b9f4ab41677a58478a0eb226704da 373 PANTHER PTHR11609 1 363 3.7E-134 T 22-04-2016 SCD_RS10095 a42b9f4ab41677a58478a0eb226704da 373 Gene3D G3DSA:3.30.470.20 182 370 8.6E-68 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SCD_RS10095 a42b9f4ab41677a58478a0eb226704da 373 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 7 360 41.262 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 SCD_RS14565 be2601516ad36a34bbea97ce8f051262 210 PANTHER PTHR39555:SF1 1 202 9.2E-47 T 22-04-2016 SCD_RS14565 be2601516ad36a34bbea97ce8f051262 210 PIRSF PIRSF016482 1 209 6.7E-59 T 22-04-2016 IPR007445 Pilus assembly protein, PilO SCD_RS14565 be2601516ad36a34bbea97ce8f051262 210 PANTHER PTHR39555 1 202 9.2E-47 T 22-04-2016 SCD_RS14565 be2601516ad36a34bbea97ce8f051262 210 Gene3D G3DSA:1.10.287.540 58 93 3.8E-14 T 22-04-2016 IPR023218 UPF0291 structural domain SCD_RS14565 be2601516ad36a34bbea97ce8f051262 210 Gene3D G3DSA:3.30.70.60 94 199 1.8E-35 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 SCD_RS14565 be2601516ad36a34bbea97ce8f051262 210 Pfam PF04350 Pilus assembly protein, PilO 49 190 4.1E-52 T 22-04-2016 IPR007445 Pilus assembly protein, PilO SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 1.1E-51 T 22-04-2016 SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 Gene3D G3DSA:3.30.70.240 401 488 1.7E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 Gene3D G3DSA:3.30.70.870 292 369 5.4E-26 T 22-04-2016 SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 PANTHER PTHR23115 397 595 2.9E-289 T 22-04-2016 SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 PANTHER PTHR23115 2 373 2.9E-289 T 22-04-2016 SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 SUPERFAMILY SSF54980 399 493 7.19E-26 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 1.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 1.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 1.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 1.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 1.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 593 4.8E-49 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 Gene3D G3DSA:3.40.50.300 2 193 2.2E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 Gene3D G3DSA:2.40.30.10 194 290 3.3E-22 T 22-04-2016 SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 SUPERFAMILY SSF54980 292 370 7.19E-19 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 SUPERFAMILY SSF50447 165 288 7.28E-28 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 5.3E-10 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 169 1.9E-16 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 595 7.9E-300 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 Pfam PF00679 Elongation factor G C-terminus 399 485 1.7E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.944 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 SUPERFAMILY SSF52540 2 205 3.54E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 PANTHER PTHR23115:SF175 397 595 2.9E-289 T 22-04-2016 SCD_RS06915 cab4d0dbcf29b07db0fd34b1d1336a21 597 PANTHER PTHR23115:SF175 2 373 2.9E-289 T 22-04-2016 SCD_RS13195 a5100c417765c42be259f475ef55f710 231 SUPERFAMILY SSF53271 56 229 1.31E-35 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SCD_RS13195 a5100c417765c42be259f475ef55f710 231 Pfam PF00156 Phosphoribosyl transferase domain 135 229 3.4E-7 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SCD_RS13195 a5100c417765c42be259f475ef55f710 231 PANTHER PTHR11907:SF9 12 228 2.2E-53 T 22-04-2016 SCD_RS13195 a5100c417765c42be259f475ef55f710 231 Gene3D G3DSA:3.40.50.2020 57 230 1.9E-30 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SCD_RS13195 a5100c417765c42be259f475ef55f710 231 PANTHER PTHR11907 12 228 2.2E-53 T 22-04-2016 SCD_RS03435 99c5887f3aa2dad9bf72328e2daa59dc 310 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 58 280 1.2E-56 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 SCD_RS03435 99c5887f3aa2dad9bf72328e2daa59dc 310 Gene3D G3DSA:3.40.710.10 56 298 7.6E-68 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS03435 99c5887f3aa2dad9bf72328e2daa59dc 310 SUPERFAMILY SSF56601 50 299 3.34E-60 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS03435 99c5887f3aa2dad9bf72328e2daa59dc 310 PANTHER PTHR21581 35 307 1.9E-93 T 22-04-2016 SCD_RS03435 99c5887f3aa2dad9bf72328e2daa59dc 310 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 164 177 7.3E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SCD_RS03435 99c5887f3aa2dad9bf72328e2daa59dc 310 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 87 98 7.3E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SCD_RS03435 99c5887f3aa2dad9bf72328e2daa59dc 310 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 137 154 7.3E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SCD_RS03435 99c5887f3aa2dad9bf72328e2daa59dc 310 PANTHER PTHR21581:SF8 35 307 1.9E-93 T 22-04-2016 SCD_RS09315 e4ab2e288a5fe2c1f8a0452541254626 756 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 580 591 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS09315 e4ab2e288a5fe2c1f8a0452541254626 756 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 550 561 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS09315 e4ab2e288a5fe2c1f8a0452541254626 756 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 141 420 5.3E-11 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS09315 e4ab2e288a5fe2c1f8a0452541254626 756 PANTHER PTHR10742:SF297 59 313 1.4E-46 T 22-04-2016 SCD_RS09315 e4ab2e288a5fe2c1f8a0452541254626 756 Gene3D G3DSA:3.40.50.720 139 316 6.3E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS09315 e4ab2e288a5fe2c1f8a0452541254626 756 PANTHER PTHR10742 59 313 1.4E-46 T 22-04-2016 SCD_RS09315 e4ab2e288a5fe2c1f8a0452541254626 756 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 163 9.9E-7 T 22-04-2016 SCD_RS09315 e4ab2e288a5fe2c1f8a0452541254626 756 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 422 9.9E-7 T 22-04-2016 SCD_RS09315 e4ab2e288a5fe2c1f8a0452541254626 756 SUPERFAMILY SSF54862 528 600 3.87E-18 T 22-04-2016 SCD_RS09315 e4ab2e288a5fe2c1f8a0452541254626 756 SUPERFAMILY SSF51905 460 522 1.97E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS09315 e4ab2e288a5fe2c1f8a0452541254626 756 SUPERFAMILY SSF51905 321 425 1.97E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS09315 e4ab2e288a5fe2c1f8a0452541254626 756 SUPERFAMILY SSF51905 141 288 1.97E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS09315 e4ab2e288a5fe2c1f8a0452541254626 756 Pfam PF02662 Methyl-viologen-reducing hydrogenase, delta subunit 624 749 1.2E-39 T 22-04-2016 IPR003813 Methyl-viologen-reducing hydrogenase, delta subunit GO:0015948|GO:0055114 SCD_RS09315 e4ab2e288a5fe2c1f8a0452541254626 756 Gene3D G3DSA:3.30.70.20 544 599 1.2E-14 T 22-04-2016 SCD_RS09315 e4ab2e288a5fe2c1f8a0452541254626 756 Gene3D G3DSA:3.50.50.60 368 420 8.9E-7 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS09315 e4ab2e288a5fe2c1f8a0452541254626 756 Gene3D G3DSA:3.50.50.60 461 522 8.9E-7 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS09315 e4ab2e288a5fe2c1f8a0452541254626 756 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 407 423 6.0E-6 T 22-04-2016 SCD_RS09315 e4ab2e288a5fe2c1f8a0452541254626 756 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 161 6.0E-6 T 22-04-2016 SCD_RS09315 e4ab2e288a5fe2c1f8a0452541254626 756 Pfam PF13187 4Fe-4S dicluster domain 550 594 3.3E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS10020 cd3bcc3048c90c35b75383482847b786 515 Gene3D G3DSA:1.10.645.10 148 370 1.5E-36 T 22-04-2016 IPR029014 NiFe hydrogenase-like SCD_RS10020 cd3bcc3048c90c35b75383482847b786 515 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 24 137 9.3E-14 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 SCD_RS10020 cd3bcc3048c90c35b75383482847b786 515 SUPERFAMILY SSF56762 169 514 1.7E-93 T 22-04-2016 IPR029014 NiFe hydrogenase-like SCD_RS10020 cd3bcc3048c90c35b75383482847b786 515 PANTHER PTHR11993 107 510 5.7E-138 T 22-04-2016 SCD_RS10020 cd3bcc3048c90c35b75383482847b786 515 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 282 437 1.0E-30 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 SCD_RS10020 cd3bcc3048c90c35b75383482847b786 515 Gene3D G3DSA:1.10.645.10 371 507 2.9E-21 T 22-04-2016 IPR029014 NiFe hydrogenase-like SCD_RS10020 cd3bcc3048c90c35b75383482847b786 515 SUPERFAMILY SSF143243 19 173 3.27E-28 T 22-04-2016 SCD_RS10020 cd3bcc3048c90c35b75383482847b786 515 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 133 4.0E-4 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 SCD_RS10020 cd3bcc3048c90c35b75383482847b786 515 PANTHER PTHR11993:SF16 107 510 5.7E-138 T 22-04-2016 SCD_RS07770 42dcec7dbfe523839b720baf6baa421c 602 Gene3D G3DSA:3.30.70.870 304 400 1.5E-37 T 22-04-2016 SCD_RS07770 42dcec7dbfe523839b720baf6baa421c 602 Gene3D G3DSA:3.30.70.240 401 481 1.8E-31 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SCD_RS07770 42dcec7dbfe523839b720baf6baa421c 602 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SCD_RS07770 42dcec7dbfe523839b720baf6baa421c 602 SMART SM00838 396 484 0.003 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SCD_RS07770 42dcec7dbfe523839b720baf6baa421c 602 Pfam PF00009 Elongation factor Tu GTP binding domain 5 195 4.4E-56 T 22-04-2016 SCD_RS07770 42dcec7dbfe523839b720baf6baa421c 602 SUPERFAMILY SSF52540 4 206 1.86E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07770 42dcec7dbfe523839b720baf6baa421c 602 SUPERFAMILY SSF50447 151 300 3.09E-34 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SCD_RS07770 42dcec7dbfe523839b720baf6baa421c 602 PANTHER PTHR23115 6 593 7.3E-282 T 22-04-2016 SCD_RS07770 42dcec7dbfe523839b720baf6baa421c 602 Gene3D G3DSA:2.40.30.10 205 303 7.4E-28 T 22-04-2016 SCD_RS07770 42dcec7dbfe523839b720baf6baa421c 602 PANTHER PTHR23115:SF14 6 593 7.3E-282 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 SCD_RS07770 42dcec7dbfe523839b720baf6baa421c 602 SUPERFAMILY SSF54980 399 513 9.11E-29 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SCD_RS07770 42dcec7dbfe523839b720baf6baa421c 602 Gene3D G3DSA:2.40.50.250 483 577 2.7E-42 T 22-04-2016 SCD_RS07770 42dcec7dbfe523839b720baf6baa421c 602 Gene3D G3DSA:3.40.50.300 5 204 3.0E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07770 42dcec7dbfe523839b720baf6baa421c 602 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 147 8.5E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SCD_RS07770 42dcec7dbfe523839b720baf6baa421c 602 Pfam PF00679 Elongation factor G C-terminus 397 480 6.0E-24 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SCD_RS07770 42dcec7dbfe523839b720baf6baa421c 602 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 6 599 2.2E-291 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 SCD_RS07770 42dcec7dbfe523839b720baf6baa421c 602 SUPERFAMILY SSF54980 303 388 1.51E-14 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SCD_RS07770 42dcec7dbfe523839b720baf6baa421c 602 Pfam PF03144 Elongation factor Tu domain 2 219 290 1.0E-10 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SCD_RS07770 42dcec7dbfe523839b720baf6baa421c 602 PRINTS PR00315 GTP-binding elongation factor signature 87 98 2.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS07770 42dcec7dbfe523839b720baf6baa421c 602 PRINTS PR00315 GTP-binding elongation factor signature 123 132 2.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS07770 42dcec7dbfe523839b720baf6baa421c 602 PRINTS PR00315 GTP-binding elongation factor signature 7 20 2.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS07770 42dcec7dbfe523839b720baf6baa421c 602 PRINTS PR00315 GTP-binding elongation factor signature 51 59 2.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS07770 42dcec7dbfe523839b720baf6baa421c 602 PRINTS PR00315 GTP-binding elongation factor signature 71 81 2.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS07430 454479223c29701f72b69e584ef8d8f4 944 Gene3D G3DSA:3.40.50.970 161 520 3.7E-72 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS07430 454479223c29701f72b69e584ef8d8f4 944 Gene3D G3DSA:3.40.50.970 596 799 4.0E-23 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS07430 454479223c29701f72b69e584ef8d8f4 944 Pfam PF00676 Dehydrogenase E1 component 211 518 2.1E-52 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 SCD_RS07430 454479223c29701f72b69e584ef8d8f4 944 SMART SM00861 596 793 6.2E-62 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SCD_RS07430 454479223c29701f72b69e584ef8d8f4 944 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 938 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SCD_RS07430 454479223c29701f72b69e584ef8d8f4 944 PANTHER PTHR23152 3 944 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SCD_RS07430 454479223c29701f72b69e584ef8d8f4 944 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 798 939 1.7E-51 T 22-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SCD_RS07430 454479223c29701f72b69e584ef8d8f4 944 Pfam PF02779 Transketolase, pyrimidine binding domain 596 794 3.5E-66 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SCD_RS07430 454479223c29701f72b69e584ef8d8f4 944 SUPERFAMILY SSF52518 578 800 1.57E-51 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS07430 454479223c29701f72b69e584ef8d8f4 944 PANTHER PTHR23152:SF4 3 944 0.0 T 22-04-2016 SCD_RS07430 454479223c29701f72b69e584ef8d8f4 944 SUPERFAMILY SSF52518 124 542 2.03E-91 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS07430 454479223c29701f72b69e584ef8d8f4 944 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 11 48 4.0E-14 T 22-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SCD_RS07430 454479223c29701f72b69e584ef8d8f4 944 PIRSF PIRSF000157 1 941 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SCD_RS10040 f9edf00d6f732f910c2930018d899570 300 PANTHER PTHR30126:SF5 3 294 7.9E-136 T 22-04-2016 SCD_RS10040 f9edf00d6f732f910c2930018d899570 300 Gene3D G3DSA:1.10.10.10 5 89 5.4E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS10040 f9edf00d6f732f910c2930018d899570 300 Gene3D G3DSA:3.40.190.10 178 265 7.6E-29 T 22-04-2016 SCD_RS10040 f9edf00d6f732f910c2930018d899570 300 PANTHER PTHR30126 3 294 7.9E-136 T 22-04-2016 SCD_RS10040 f9edf00d6f732f910c2930018d899570 300 SUPERFAMILY SSF53850 93 297 9.15E-49 T 22-04-2016 SCD_RS10040 f9edf00d6f732f910c2930018d899570 300 Gene3D G3DSA:3.40.190.10 92 177 2.1E-16 T 22-04-2016 SCD_RS10040 f9edf00d6f732f910c2930018d899570 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 7.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SCD_RS10040 f9edf00d6f732f910c2930018d899570 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 7.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SCD_RS10040 f9edf00d6f732f910c2930018d899570 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.6E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SCD_RS10040 f9edf00d6f732f910c2930018d899570 300 SUPERFAMILY SSF46785 3 82 1.2E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS10040 f9edf00d6f732f910c2930018d899570 300 Pfam PF03466 LysR substrate binding domain 92 293 2.2E-54 T 22-04-2016 IPR005119 LysR, substrate-binding SCD_RS06845 6faf261d9e17856cf2225884d44a06c9 281 Gene3D G3DSA:3.40.50.150 1 281 1.4E-95 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS06845 6faf261d9e17856cf2225884d44a06c9 281 PANTHER PTHR37426 1 281 7.1E-107 T 22-04-2016 SCD_RS06845 6faf261d9e17856cf2225884d44a06c9 281 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 267 37.788 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 SCD_RS06845 6faf261d9e17856cf2225884d44a06c9 281 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 279 8.1E-76 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 SCD_RS06845 6faf261d9e17856cf2225884d44a06c9 281 SUPERFAMILY SSF53335 8 280 1.4E-81 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS06845 6faf261d9e17856cf2225884d44a06c9 281 PANTHER PTHR37426:SF1 1 281 7.1E-107 T 22-04-2016 SCD_RS11205 c6af31599dfb8faf6e09a1854c7a7601 114 Pfam PF00355 Rieske [2Fe-2S] domain 9 90 1.8E-13 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SCD_RS11205 c6af31599dfb8faf6e09a1854c7a7601 114 Gene3D G3DSA:2.102.10.10 7 110 1.2E-29 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SCD_RS11205 c6af31599dfb8faf6e09a1854c7a7601 114 SUPERFAMILY SSF50022 9 110 6.94E-34 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SCD_RS11205 c6af31599dfb8faf6e09a1854c7a7601 114 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 9 107 1.5E-29 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 SCD_RS11205 c6af31599dfb8faf6e09a1854c7a7601 114 PANTHER PTHR21496 9 105 2.9E-20 T 22-04-2016 SCD_RS10720 8d63ecf5ad364bf03fea26dc4fb155f7 311 SUPERFAMILY SSF53850 87 296 5.58E-38 T 22-04-2016 SCD_RS10720 8d63ecf5ad364bf03fea26dc4fb155f7 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SCD_RS10720 8d63ecf5ad364bf03fea26dc4fb155f7 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SCD_RS10720 8d63ecf5ad364bf03fea26dc4fb155f7 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SCD_RS10720 8d63ecf5ad364bf03fea26dc4fb155f7 311 PANTHER PTHR30346 1 293 3.4E-100 T 22-04-2016 SCD_RS10720 8d63ecf5ad364bf03fea26dc4fb155f7 311 Gene3D G3DSA:1.10.10.10 1 84 1.3E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS10720 8d63ecf5ad364bf03fea26dc4fb155f7 311 Gene3D G3DSA:3.40.190.10 173 271 2.5E-25 T 22-04-2016 SCD_RS10720 8d63ecf5ad364bf03fea26dc4fb155f7 311 Pfam PF03466 LysR substrate binding domain 87 294 8.8E-44 T 22-04-2016 IPR005119 LysR, substrate-binding SCD_RS10720 8d63ecf5ad364bf03fea26dc4fb155f7 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.6E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SCD_RS10720 8d63ecf5ad364bf03fea26dc4fb155f7 311 PANTHER PTHR30346:SF15 1 293 3.4E-100 T 22-04-2016 SCD_RS10720 8d63ecf5ad364bf03fea26dc4fb155f7 311 Gene3D G3DSA:3.40.190.10 90 172 1.0E-14 T 22-04-2016 SCD_RS10720 8d63ecf5ad364bf03fea26dc4fb155f7 311 SUPERFAMILY SSF46785 1 86 2.57E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS05625 f6acd72c89ff2373260c5969cb75ffdf 278 SUPERFAMILY SSF51690 110 275 7.06E-56 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SCD_RS05625 f6acd72c89ff2373260c5969cb75ffdf 278 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 19 107 9.6E-28 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 SCD_RS05625 f6acd72c89ff2373260c5969cb75ffdf 278 PANTHER PTHR32179 1 275 7.3E-111 T 22-04-2016 SCD_RS05625 f6acd72c89ff2373260c5969cb75ffdf 278 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 11 275 1.9E-90 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 SCD_RS05625 f6acd72c89ff2373260c5969cb75ffdf 278 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 110 274 1.8E-54 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SCD_RS05625 f6acd72c89ff2373260c5969cb75ffdf 278 Gene3D G3DSA:3.90.1170.20 5 129 8.7E-50 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 SCD_RS05625 f6acd72c89ff2373260c5969cb75ffdf 278 PIRSF PIRSF006250 1 278 9.2E-93 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD SCD_RS05625 f6acd72c89ff2373260c5969cb75ffdf 278 Gene3D G3DSA:3.20.20.70 130 264 1.2E-54 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS05625 f6acd72c89ff2373260c5969cb75ffdf 278 SUPERFAMILY SSF54675 6 107 9.03E-32 T 22-04-2016 SCD_RS06310 afa3275475f62adc8050340b641e3bce 84 PANTHER PTHR33359:SF1 1 84 1.1E-21 T 22-04-2016 SCD_RS06310 afa3275475f62adc8050340b641e3bce 84 Gene3D G3DSA:3.10.20.30 1 84 2.4E-24 T 22-04-2016 IPR012675 Beta-grasp domain SCD_RS06310 afa3275475f62adc8050340b641e3bce 84 Pfam PF02597 ThiS family 5 84 3.1E-19 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 SCD_RS06310 afa3275475f62adc8050340b641e3bce 84 SUPERFAMILY SSF54285 1 84 1.7E-21 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SCD_RS06310 afa3275475f62adc8050340b641e3bce 84 PANTHER PTHR33359 1 84 1.1E-21 T 22-04-2016 SCD_RS06310 afa3275475f62adc8050340b641e3bce 84 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 84 2.6E-23 T 22-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 SCD_RS05855 e8191f0ee3e160d78af0ee7d2def0b52 451 SUPERFAMILY SSF52540 225 403 3.25E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05855 e8191f0ee3e160d78af0ee7d2def0b52 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 247 1.7E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS05855 e8191f0ee3e160d78af0ee7d2def0b52 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 276 291 1.7E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS05855 e8191f0ee3e160d78af0ee7d2def0b52 451 PANTHER PTHR10229:SF0 26 387 9.4E-121 T 22-04-2016 SCD_RS05855 e8191f0ee3e160d78af0ee7d2def0b52 451 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 95 388 4.5E-104 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SCD_RS05855 e8191f0ee3e160d78af0ee7d2def0b52 451 Pfam PF13167 GTP-binding GTPase N-terminal 28 134 5.1E-28 T 22-04-2016 IPR025121 GTPase HflX, N-terminal SCD_RS05855 e8191f0ee3e160d78af0ee7d2def0b52 451 PANTHER PTHR10229 26 387 9.4E-121 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SCD_RS05855 e8191f0ee3e160d78af0ee7d2def0b52 451 Gene3D G3DSA:3.40.50.300 225 392 4.7E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05855 e8191f0ee3e160d78af0ee7d2def0b52 451 Pfam PF16360 GTP-binding GTPase Middle Region 137 218 5.3E-19 T 22-04-2016 IPR032305 GTP-binding protein, middle domain SCD_RS05855 e8191f0ee3e160d78af0ee7d2def0b52 451 Hamap MF_00900 GTPase HflX [hflX]. 31 420 44.337 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SCD_RS05855 e8191f0ee3e160d78af0ee7d2def0b52 451 Pfam PF01926 50S ribosome-binding GTPase 226 345 1.9E-19 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS05855 e8191f0ee3e160d78af0ee7d2def0b52 451 PIRSF PIRSF006809 2 451 3.1E-143 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SCD_RS14050 82cfe0a26213098dfd0bc4ee5bae6d15 243 Gene3D G3DSA:2.40.240.20 1 68 2.5E-26 T 22-04-2016 SCD_RS14050 82cfe0a26213098dfd0bc4ee5bae6d15 243 Gene3D G3DSA:3.40.1280.10 75 242 1.4E-57 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SCD_RS14050 82cfe0a26213098dfd0bc4ee5bae6d15 243 SUPERFAMILY SSF88697 3 71 2.82E-18 T 22-04-2016 IPR015947 PUA-like domain SCD_RS14050 82cfe0a26213098dfd0bc4ee5bae6d15 243 Pfam PF04452 RNA methyltransferase 19 237 4.1E-72 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SCD_RS14050 82cfe0a26213098dfd0bc4ee5bae6d15 243 PANTHER PTHR30027 1 243 3.2E-83 T 22-04-2016 SCD_RS14050 82cfe0a26213098dfd0bc4ee5bae6d15 243 SUPERFAMILY SSF75217 74 242 6.98E-51 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SCD_RS14050 82cfe0a26213098dfd0bc4ee5bae6d15 243 PANTHER PTHR30027:SF3 1 243 3.2E-83 T 22-04-2016 SCD_RS14050 82cfe0a26213098dfd0bc4ee5bae6d15 243 PIRSF PIRSF015601 2 242 9.6E-59 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SCD_RS14050 82cfe0a26213098dfd0bc4ee5bae6d15 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 5 242 5.4E-64 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SCD_RS09175 4d63c6606fd290301c77266d6792fda7 443 PANTHER PTHR30097:SF3 54 429 1.1E-110 T 22-04-2016 SCD_RS09175 4d63c6606fd290301c77266d6792fda7 443 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 107 411 5.3E-40 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SCD_RS09175 4d63c6606fd290301c77266d6792fda7 443 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 116 337 4.0E-82 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SCD_RS09175 4d63c6606fd290301c77266d6792fda7 443 Gene3D G3DSA:2.40.50.100 134 167 7.3E-7 T 22-04-2016 SCD_RS09175 4d63c6606fd290301c77266d6792fda7 443 Gene3D G3DSA:2.40.50.100 231 263 7.3E-7 T 22-04-2016 SCD_RS09175 4d63c6606fd290301c77266d6792fda7 443 PANTHER PTHR30097 54 429 1.1E-110 T 22-04-2016 SCD_RS09175 4d63c6606fd290301c77266d6792fda7 443 SUPERFAMILY SSF111369 120 341 3.79E-12 T 22-04-2016 SCD_RS06695 e6d072c5a002e1e93f68ea3429fd4d6e 361 PANTHER PTHR10366:SF32 4 282 2.3E-217 T 22-04-2016 SCD_RS06695 e6d072c5a002e1e93f68ea3429fd4d6e 361 PANTHER PTHR10366:SF32 299 347 2.3E-217 T 22-04-2016 SCD_RS06695 e6d072c5a002e1e93f68ea3429fd4d6e 361 Gene3D G3DSA:3.90.25.10 293 349 4.9E-53 T 22-04-2016 SCD_RS06695 e6d072c5a002e1e93f68ea3429fd4d6e 361 Gene3D G3DSA:3.90.25.10 193 247 4.9E-53 T 22-04-2016 SCD_RS06695 e6d072c5a002e1e93f68ea3429fd4d6e 361 PANTHER PTHR10366 4 282 2.3E-217 T 22-04-2016 SCD_RS06695 e6d072c5a002e1e93f68ea3429fd4d6e 361 PANTHER PTHR10366 299 347 2.3E-217 T 22-04-2016 SCD_RS06695 e6d072c5a002e1e93f68ea3429fd4d6e 361 SUPERFAMILY SSF51735 3 341 3.87E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS06695 e6d072c5a002e1e93f68ea3429fd4d6e 361 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 3 342 1.1E-181 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 SCD_RS06695 e6d072c5a002e1e93f68ea3429fd4d6e 361 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 345 56.887 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 SCD_RS06695 e6d072c5a002e1e93f68ea3429fd4d6e 361 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 335 3.4E-161 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS06695 e6d072c5a002e1e93f68ea3429fd4d6e 361 Gene3D G3DSA:3.40.50.720 2 190 1.3E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 Pfam PF02810 SEC-C motif 886 904 2.6E-10 T 22-04-2016 IPR004027 SEC-C motif SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 Gene3D G3DSA:3.40.50.300 364 411 2.9E-127 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 Gene3D G3DSA:3.40.50.300 3 228 2.9E-127 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 SUPERFAMILY SSF81767 227 363 1.14E-43 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 Pfam PF07516 SecA Wing and Scaffold domain 619 831 2.1E-70 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 Gene3D G3DSA:1.10.3060.10 650 833 1.2E-59 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 834 20.082 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 Pfam PF07517 SecA DEAD-like domain 7 397 6.3E-134 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 SUPERFAMILY SSF81886 622 842 5.36E-85 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 SUPERFAMILY SSF81886 882 894 5.36E-85 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 SMART SM00957 6 397 0.0 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 ProSitePatterns PS01312 SecA family signature. 495 510 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 SUPERFAMILY SSF52540 6 228 2.82E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 SUPERFAMILY SSF52540 363 409 2.82E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 SMART SM00958 228 353 2.1E-77 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 819 0.0 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 PRINTS PR00906 SecA protein signature 408 421 1.9E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 PRINTS PR00906 SecA protein signature 101 115 1.9E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 PRINTS PR00906 SecA protein signature 371 388 1.9E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 PRINTS PR00906 SecA protein signature 334 356 1.9E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 PRINTS PR00906 SecA protein signature 117 127 1.9E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 PRINTS PR00906 SecA protein signature 170 190 1.9E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 PRINTS PR00906 SecA protein signature 63 87 1.9E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 PANTHER PTHR30612 1 515 0.0 T 22-04-2016 SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 PANTHER PTHR30612 552 906 0.0 T 22-04-2016 SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 Pfam PF01043 SecA preprotein cross-linking domain 233 353 2.0E-37 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 Gene3D G3DSA:3.90.1440.10 230 363 6.6E-45 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 Gene3D G3DSA:3.40.50.300 412 621 9.1E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12230 372d34182f41e96932b60eb1f4f16eda 906 SUPERFAMILY SSF52540 411 620 1.49E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS10620 207ea84cdedd4ff63c3723934c3e1ef4 204 Gene3D G3DSA:3.90.1470.10 13 128 7.2E-43 T 22-04-2016 SCD_RS10620 207ea84cdedd4ff63c3723934c3e1ef4 204 SUPERFAMILY SSF56784 1 194 3.74E-45 T 22-04-2016 IPR023214 HAD-like domain SCD_RS10620 207ea84cdedd4ff63c3723934c3e1ef4 204 TIGRFAM TIGR02137 HSK-PSP: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein 1 200 8.3E-94 T 22-04-2016 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 SCD_RS10620 207ea84cdedd4ff63c3723934c3e1ef4 204 Gene3D G3DSA:3.40.50.1000 131 196 5.0E-16 T 22-04-2016 IPR023214 HAD-like domain SCD_RS10620 207ea84cdedd4ff63c3723934c3e1ef4 204 Pfam PF00702 haloacid dehalogenase-like hydrolase 59 163 1.5E-8 T 22-04-2016 SCD_RS01975 41c8bb03f8bf5d44db08dc8a3053700a 406 Hamap MF_01262 CCA-adding enzyme [cca]. 1 398 40.57 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 SCD_RS01975 41c8bb03f8bf5d44db08dc8a3053700a 406 Pfam PF01743 Poly A polymerase head domain 4 122 3.0E-17 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 SCD_RS01975 41c8bb03f8bf5d44db08dc8a3053700a 406 PIRSF PIRSF000813 1 405 1.6E-188 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 SCD_RS01975 41c8bb03f8bf5d44db08dc8a3053700a 406 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 146 209 4.4E-12 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain SCD_RS01975 41c8bb03f8bf5d44db08dc8a3053700a 406 PANTHER PTHR13734 1 233 4.1E-68 T 22-04-2016 SCD_RS01975 41c8bb03f8bf5d44db08dc8a3053700a 406 Pfam PF01966 HD domain 228 318 1.9E-7 T 22-04-2016 IPR006674 HD domain SCD_RS01975 41c8bb03f8bf5d44db08dc8a3053700a 406 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 404 51.776 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 SCD_RS01975 41c8bb03f8bf5d44db08dc8a3053700a 406 SUPERFAMILY SSF81301 2 118 6.1E-30 T 22-04-2016 SCD_RS01975 41c8bb03f8bf5d44db08dc8a3053700a 406 Gene3D G3DSA:3.30.460.10 1 121 1.1E-30 T 22-04-2016 SCD_RS01975 41c8bb03f8bf5d44db08dc8a3053700a 406 SUPERFAMILY SSF81891 120 349 9.81E-51 T 22-04-2016 SCD_RS01975 41c8bb03f8bf5d44db08dc8a3053700a 406 Gene3D G3DSA:1.10.3090.10 122 349 7.5E-52 T 22-04-2016 SCD_RS02925 be54a740056585b9979926b358242c93 218 SUPERFAMILY SSF52317 3 210 3.15E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SCD_RS02925 be54a740056585b9979926b358242c93 218 PANTHER PTHR21235:SF1 4 210 6.6E-80 T 22-04-2016 SCD_RS02925 be54a740056585b9979926b358242c93 218 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 210 4.8E-65 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SCD_RS02925 be54a740056585b9979926b358242c93 218 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 210 36.223 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SCD_RS02925 be54a740056585b9979926b358242c93 218 PIRSF PIRSF000495 2 213 2.6E-68 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SCD_RS02925 be54a740056585b9979926b358242c93 218 PANTHER PTHR21235 4 210 6.6E-80 T 22-04-2016 SCD_RS02925 be54a740056585b9979926b358242c93 218 Pfam PF00117 Glutamine amidotransferase class-I 6 207 2.1E-18 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SCD_RS02925 be54a740056585b9979926b358242c93 218 Gene3D G3DSA:3.40.50.880 3 210 2.3E-77 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SCD_RS14975 a37183b444c19e06627d87b7ec50f4c8 77 Pfam PF00137 ATP synthase subunit C 8 70 3.2E-8 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SCD_RS14975 a37183b444c19e06627d87b7ec50f4c8 77 PANTHER PTHR10031 7 75 7.1E-21 T 22-04-2016 SCD_RS14975 a37183b444c19e06627d87b7ec50f4c8 77 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 18 74 2.2E-29 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SCD_RS14975 a37183b444c19e06627d87b7ec50f4c8 77 PRINTS PR00124 ATP synthase C subunit signature 47 72 7.1E-11 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SCD_RS14975 a37183b444c19e06627d87b7ec50f4c8 77 PRINTS PR00124 ATP synthase C subunit signature 9 28 7.1E-11 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SCD_RS14975 a37183b444c19e06627d87b7ec50f4c8 77 PRINTS PR00124 ATP synthase C subunit signature 30 45 7.1E-11 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SCD_RS14975 a37183b444c19e06627d87b7ec50f4c8 77 Hamap MF_01396 ATP synthase subunit c [atpH]. 6 74 14.657 T 22-04-2016 SCD_RS14975 a37183b444c19e06627d87b7ec50f4c8 77 Gene3D G3DSA:1.20.20.10 4 74 1.3E-29 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SCD_RS14975 a37183b444c19e06627d87b7ec50f4c8 77 SUPERFAMILY SSF81333 3 74 7.32E-17 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SCD_RS14975 a37183b444c19e06627d87b7ec50f4c8 77 ProSitePatterns PS00605 ATP synthase c subunit signature. 37 58 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site SCD_RS09860 16e163a691028cbe9b36cdd70fbf8f72 441 Gene3D G3DSA:3.90.550.10 33 312 5.4E-76 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS09860 16e163a691028cbe9b36cdd70fbf8f72 441 Gene3D G3DSA:3.90.550.10 355 398 5.4E-76 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS09860 16e163a691028cbe9b36cdd70fbf8f72 441 Pfam PF00483 Nucleotidyl transferase 35 301 5.0E-64 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SCD_RS09860 16e163a691028cbe9b36cdd70fbf8f72 441 PANTHER PTHR22572:SF10 34 404 2.5E-163 T 22-04-2016 SCD_RS09860 16e163a691028cbe9b36cdd70fbf8f72 441 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 34 405 6.8E-152 T 22-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SCD_RS09860 16e163a691028cbe9b36cdd70fbf8f72 441 SUPERFAMILY SSF51161 323 408 3.24E-15 T 22-04-2016 IPR011004 Trimeric LpxA-like SCD_RS09860 16e163a691028cbe9b36cdd70fbf8f72 441 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 30 434 50.607 T 22-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SCD_RS09860 16e163a691028cbe9b36cdd70fbf8f72 441 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 223 233 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SCD_RS09860 16e163a691028cbe9b36cdd70fbf8f72 441 SUPERFAMILY SSF53448 372 388 1.62E-75 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS09860 16e163a691028cbe9b36cdd70fbf8f72 441 SUPERFAMILY SSF53448 30 305 1.62E-75 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS09860 16e163a691028cbe9b36cdd70fbf8f72 441 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 125 133 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SCD_RS09860 16e163a691028cbe9b36cdd70fbf8f72 441 PANTHER PTHR22572 34 404 2.5E-163 T 22-04-2016 SCD_RS13485 85e5c0455c55a36e39b5c3cc692dbbc7 745 Gene3D G3DSA:1.10.268.10 373 468 2.3E-26 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS13485 85e5c0455c55a36e39b5c3cc692dbbc7 745 PANTHER PTHR10169:SF30 279 530 4.1E-191 T 22-04-2016 SCD_RS13485 85e5c0455c55a36e39b5c3cc692dbbc7 745 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 20 473 4.7E-126 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS13485 85e5c0455c55a36e39b5c3cc692dbbc7 745 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 3 698 3.9E-225 T 22-04-2016 SCD_RS13485 85e5c0455c55a36e39b5c3cc692dbbc7 745 SMART SM00434 1 471 1.8E-200 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS13485 85e5c0455c55a36e39b5c3cc692dbbc7 745 SUPERFAMILY SSF101904 509 731 3.27E-42 T 22-04-2016 SCD_RS13485 85e5c0455c55a36e39b5c3cc692dbbc7 745 PANTHER PTHR10169:SF30 1 255 4.1E-191 T 22-04-2016 SCD_RS13485 85e5c0455c55a36e39b5c3cc692dbbc7 745 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 654 692 5.6E-4 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SCD_RS13485 85e5c0455c55a36e39b5c3cc692dbbc7 745 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 553 581 4.2 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SCD_RS13485 85e5c0455c55a36e39b5c3cc692dbbc7 745 Gene3D G3DSA:2.120.10.90 503 728 1.9E-25 T 22-04-2016 SCD_RS13485 85e5c0455c55a36e39b5c3cc692dbbc7 745 SUPERFAMILY SSF56719 19 493 4.05E-143 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SCD_RS13485 85e5c0455c55a36e39b5c3cc692dbbc7 745 Gene3D G3DSA:3.90.199.10 12 265 7.6E-100 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SCD_RS13485 85e5c0455c55a36e39b5c3cc692dbbc7 745 PANTHER PTHR10169 279 530 4.1E-191 T 22-04-2016 SCD_RS13485 85e5c0455c55a36e39b5c3cc692dbbc7 745 PANTHER PTHR10169 1 255 4.1E-191 T 22-04-2016 SCD_RS13485 85e5c0455c55a36e39b5c3cc692dbbc7 745 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 1 740 31.368 T 22-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 PANTHER PTHR24093 13 895 0.0 T 22-04-2016 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 92 200 2.3E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 214 355 1.1E-27 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 608 725 3.6E-34 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 Pfam PF08282 haloacid dehalogenase-like hydrolase 622 676 1.2E-4 T 22-04-2016 IPR023214 HAD-like domain SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 SUPERFAMILY SSF81665 234 327 7.32E-129 T 22-04-2016 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 SUPERFAMILY SSF81665 686 895 7.32E-129 T 22-04-2016 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 SUPERFAMILY SSF81665 11 124 7.32E-129 T 22-04-2016 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 Pfam PF00122 E1-E2 ATPase 92 324 3.8E-65 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 335 341 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 Gene3D G3DSA:2.70.150.10 119 233 1.2E-39 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 Gene3D G3DSA:2.70.150.10 25 65 1.2E-39 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 SUPERFAMILY SSF56784 331 351 2.63E-59 T 22-04-2016 IPR023214 HAD-like domain SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 SUPERFAMILY SSF56784 490 741 2.63E-59 T 22-04-2016 IPR023214 HAD-like domain SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 SUPERFAMILY SSF81660 340 537 1.09E-49 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 Pfam PF00690 Cation transporter/ATPase, N-terminus 13 80 5.4E-19 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 SMART SM00831 12 86 2.3E-34 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 Pfam PF00689 Cation transporting ATPase, C-terminus 721 891 4.3E-44 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 Gene3D G3DSA:3.40.1110.10 323 540 1.1E-54 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 SUPERFAMILY SSF81653 127 233 1.31E-28 T 22-04-2016 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 555 565 1.0E-43 T 22-04-2016 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 660 672 1.0E-43 T 22-04-2016 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 533 544 1.0E-43 T 22-04-2016 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 636 655 1.0E-43 T 22-04-2016 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 333 347 1.0E-43 T 22-04-2016 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 171 185 1.0E-43 T 22-04-2016 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 608 624 3.3E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 493 511 3.3E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 636 652 3.3E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 668 693 3.3E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 Pfam PF13246 Cation transport ATPase (P-type) 391 475 7.8E-18 T 22-04-2016 SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 Gene3D G3DSA:1.20.1110.10 66 118 4.0E-116 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain SCD_RS02665 5dae9198a6cca83986195de5cfd2db0e 896 Gene3D G3DSA:1.20.1110.10 605 894 4.0E-116 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain SCD_RS04090 8fafd886bfbaf0b8bab3b329d1d3b151 511 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 498 2.2E-220 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SCD_RS04090 8fafd886bfbaf0b8bab3b329d1d3b151 511 SUPERFAMILY SSF51569 1 291 5.13E-100 T 22-04-2016 SCD_RS04090 8fafd886bfbaf0b8bab3b329d1d3b151 511 SMART SM00917 370 501 1.9E-43 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SCD_RS04090 8fafd886bfbaf0b8bab3b329d1d3b151 511 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 510 44.258 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SCD_RS04090 8fafd886bfbaf0b8bab3b329d1d3b151 511 PANTHER PTHR10277:SF9 1 509 5.8E-255 T 22-04-2016 SCD_RS04090 8fafd886bfbaf0b8bab3b329d1d3b151 511 Pfam PF08502 LeuA allosteric (dimerisation) domain 370 500 1.7E-37 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SCD_RS04090 8fafd886bfbaf0b8bab3b329d1d3b151 511 PANTHER PTHR10277 1 509 5.8E-255 T 22-04-2016 SCD_RS04090 8fafd886bfbaf0b8bab3b329d1d3b151 511 Gene3D G3DSA:3.20.20.70 1 347 2.4E-151 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS04090 8fafd886bfbaf0b8bab3b329d1d3b151 511 SUPERFAMILY SSF110921 391 500 1.57E-25 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SCD_RS04090 8fafd886bfbaf0b8bab3b329d1d3b151 511 Pfam PF00682 HMGL-like 5 273 6.6E-100 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 SCD_RS04090 8fafd886bfbaf0b8bab3b329d1d3b151 511 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SCD_RS04090 8fafd886bfbaf0b8bab3b329d1d3b151 511 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SCD_RS00470 dbb8184af17209c7d13d2fb24cb1655b 491 ProSitePatterns PS00571 Amidases signature. 149 180 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SCD_RS00470 dbb8184af17209c7d13d2fb24cb1655b 491 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 9 475 94.212 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SCD_RS00470 dbb8184af17209c7d13d2fb24cb1655b 491 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 11 475 3.7E-184 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SCD_RS00470 dbb8184af17209c7d13d2fb24cb1655b 491 Pfam PF01425 Amidase 22 464 1.9E-157 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SCD_RS00470 dbb8184af17209c7d13d2fb24cb1655b 491 PANTHER PTHR11895:SF7 1 481 1.5E-224 T 22-04-2016 SCD_RS00470 dbb8184af17209c7d13d2fb24cb1655b 491 PANTHER PTHR11895 1 481 1.5E-224 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SCD_RS00470 dbb8184af17209c7d13d2fb24cb1655b 491 Gene3D G3DSA:3.90.1300.10 3 482 5.7E-184 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SCD_RS00470 dbb8184af17209c7d13d2fb24cb1655b 491 SUPERFAMILY SSF75304 3 482 1.28E-166 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SCD_RS09035 97a2335ccef9e7e5736fe84a1af4aac7 327 SMART SM00937 46 156 1.3E-58 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SCD_RS09035 97a2335ccef9e7e5736fe84a1af4aac7 327 PANTHER PTHR11075 2 325 4.2E-157 T 22-04-2016 SCD_RS09035 97a2335ccef9e7e5736fe84a1af4aac7 327 PANTHER PTHR11075:SF6 2 325 4.2E-157 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 SCD_RS09035 97a2335ccef9e7e5736fe84a1af4aac7 327 Pfam PF03462 PCRF domain 2 181 1.2E-56 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SCD_RS09035 97a2335ccef9e7e5736fe84a1af4aac7 327 Pfam PF00472 RF-1 domain 190 298 2.3E-40 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SCD_RS09035 97a2335ccef9e7e5736fe84a1af4aac7 327 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 3 325 1.5E-154 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 SCD_RS09035 97a2335ccef9e7e5736fe84a1af4aac7 327 Gene3D G3DSA:3.30.160.20 189 267 4.7E-38 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SCD_RS09035 97a2335ccef9e7e5736fe84a1af4aac7 327 Gene3D G3DSA:1.20.58.410 2 77 1.0E-21 T 22-04-2016 SCD_RS09035 97a2335ccef9e7e5736fe84a1af4aac7 327 SUPERFAMILY SSF75620 2 324 2.35E-131 T 22-04-2016 SCD_RS09035 97a2335ccef9e7e5736fe84a1af4aac7 327 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 327 36.733 T 22-04-2016 IPR020853 Peptide chain release factor 2, bacterial GO:0005737|GO:0006415|GO:0016149 SCD_RS09035 97a2335ccef9e7e5736fe84a1af4aac7 327 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 206 222 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SCD_RS03480 b463e54c48b14f7e0bdb7f00ce0d7df7 129 SUPERFAMILY SSF51344 1 82 3.01E-15 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS03480 b463e54c48b14f7e0bdb7f00ce0d7df7 129 TIGRFAM TIGR03166 alt_F1F0_F1_eps: alternate F1F0 ATPase, F1 subunit epsilon 2 123 4.5E-51 T 22-04-2016 IPR024037 Alternate F1F0 ATPase, F1 subunit epsilon SCD_RS03480 b463e54c48b14f7e0bdb7f00ce0d7df7 129 Gene3D G3DSA:2.60.15.10 1 85 1.5E-11 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS03480 b463e54c48b14f7e0bdb7f00ce0d7df7 129 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 1 81 3.9E-15 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS10605 7d48e3d61f9115d78cd51f23bc3562b4 309 PANTHER PTHR30293 4 309 9.4E-74 T 22-04-2016 SCD_RS10605 7d48e3d61f9115d78cd51f23bc3562b4 309 Gene3D G3DSA:3.40.190.10 191 266 2.4E-6 T 22-04-2016 SCD_RS10605 7d48e3d61f9115d78cd51f23bc3562b4 309 Pfam PF03466 LysR substrate binding domain 96 296 9.0E-13 T 22-04-2016 IPR005119 LysR, substrate-binding SCD_RS10605 7d48e3d61f9115d78cd51f23bc3562b4 309 Gene3D G3DSA:1.10.10.10 4 87 1.1E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS10605 7d48e3d61f9115d78cd51f23bc3562b4 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.8E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SCD_RS10605 7d48e3d61f9115d78cd51f23bc3562b4 309 PANTHER PTHR30293:SF2 4 309 9.4E-74 T 22-04-2016 SCD_RS10605 7d48e3d61f9115d78cd51f23bc3562b4 309 SUPERFAMILY SSF53850 94 295 2.9E-26 T 22-04-2016 SCD_RS10605 7d48e3d61f9115d78cd51f23bc3562b4 309 SUPERFAMILY SSF46785 5 87 2.18E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS14850 fd352699dd51ff156c44af698468d7e7 403 PANTHER PTHR30489 1 402 3.5E-53 T 22-04-2016 SCD_RS14850 fd352699dd51ff156c44af698468d7e7 403 Pfam PF02687 FtsX-like permease family 272 393 6.4E-19 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SCD_RS14850 fd352699dd51ff156c44af698468d7e7 403 Pfam PF12704 MacB-like periplasmic core domain 16 236 6.9E-16 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SCD_RS06045 926ab324dfb2ae0dfdba93422cce86be 248 Pfam PF04344 Chemotaxis phosphatase, CheZ 51 248 1.2E-76 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- SCD_RS06045 926ab324dfb2ae0dfdba93422cce86be 248 PANTHER PTHR22617:SF32 67 248 6.3E-53 T 22-04-2016 SCD_RS06045 926ab324dfb2ae0dfdba93422cce86be 248 PIRSF PIRSF002884 29 248 3.1E-75 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- SCD_RS06045 926ab324dfb2ae0dfdba93422cce86be 248 SUPERFAMILY SSF75708 45 247 9.81E-60 T 22-04-2016 SCD_RS06045 926ab324dfb2ae0dfdba93422cce86be 248 Gene3D G3DSA:1.10.287.500 70 202 4.2E-48 T 22-04-2016 SCD_RS06045 926ab324dfb2ae0dfdba93422cce86be 248 PANTHER PTHR22617 67 248 6.3E-53 T 22-04-2016 SCD_RS12285 480cdf2c69b85cd92edb167b552bf87c 401 SUPERFAMILY SSF53756 40 400 1.62E-115 T 22-04-2016 SCD_RS12285 480cdf2c69b85cd92edb167b552bf87c 401 Gene3D G3DSA:3.40.50.2000 39 241 5.2E-63 T 22-04-2016 SCD_RS12285 480cdf2c69b85cd92edb167b552bf87c 401 Gene3D G3DSA:3.40.50.2000 295 384 1.8E-6 T 22-04-2016 SCD_RS12285 480cdf2c69b85cd92edb167b552bf87c 401 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 39 395 5.0E-101 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SCD_RS12285 480cdf2c69b85cd92edb167b552bf87c 401 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 230 385 4.2E-36 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SCD_RS12285 480cdf2c69b85cd92edb167b552bf87c 401 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 41 400 35.163 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SCD_RS12285 480cdf2c69b85cd92edb167b552bf87c 401 PANTHER PTHR21015 1 401 8.4E-114 T 22-04-2016 SCD_RS12285 480cdf2c69b85cd92edb167b552bf87c 401 PANTHER PTHR21015:SF22 1 401 8.4E-114 T 22-04-2016 SCD_RS12285 480cdf2c69b85cd92edb167b552bf87c 401 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 41 178 4.5E-32 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SCD_RS11110 a8e1832bbac8a41c78b6e7f8fdb59362 75 Pfam PF13192 Thioredoxin domain 1 71 4.3E-8 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS11110 a8e1832bbac8a41c78b6e7f8fdb59362 75 Gene3D G3DSA:3.40.30.10 1 67 2.8E-6 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS11110 a8e1832bbac8a41c78b6e7f8fdb59362 75 SUPERFAMILY SSF52833 5 73 4.2E-8 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS09685 e05f0c78dad0931d8f6e44ed77d09a56 655 SUPERFAMILY SSF56801 19 650 7.33E-175 T 22-04-2016 SCD_RS09685 e05f0c78dad0931d8f6e44ed77d09a56 655 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 32 87 2.5E-21 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 SCD_RS09685 e05f0c78dad0931d8f6e44ed77d09a56 655 Gene3D G3DSA:3.40.50.980 85 271 4.6E-44 T 22-04-2016 SCD_RS09685 e05f0c78dad0931d8f6e44ed77d09a56 655 Pfam PF13193 AMP-binding enzyme C-terminal domain 538 619 2.0E-27 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SCD_RS09685 e05f0c78dad0931d8f6e44ed77d09a56 655 Gene3D G3DSA:3.40.50.980 272 428 6.7E-28 T 22-04-2016 SCD_RS09685 e05f0c78dad0931d8f6e44ed77d09a56 655 Gene3D G3DSA:2.30.38.10 445 523 4.5E-9 T 22-04-2016 SCD_RS09685 e05f0c78dad0931d8f6e44ed77d09a56 655 PANTHER PTHR24095 8 650 1.8E-281 T 22-04-2016 SCD_RS09685 e05f0c78dad0931d8f6e44ed77d09a56 655 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 9 654 51.822 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 SCD_RS09685 e05f0c78dad0931d8f6e44ed77d09a56 655 ProSitePatterns PS00455 Putative AMP-binding domain signature. 266 277 - T 22-04-2016 IPR020845 AMP-binding, conserved site SCD_RS09685 e05f0c78dad0931d8f6e44ed77d09a56 655 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 27 652 1.8E-302 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 SCD_RS09685 e05f0c78dad0931d8f6e44ed77d09a56 655 Gene3D G3DSA:3.30.300.30 524 633 9.9E-27 T 22-04-2016 SCD_RS09685 e05f0c78dad0931d8f6e44ed77d09a56 655 PANTHER PTHR24095:SF178 8 650 1.8E-281 T 22-04-2016 SCD_RS09685 e05f0c78dad0931d8f6e44ed77d09a56 655 Pfam PF00501 AMP-binding enzyme 89 529 7.0E-94 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SCD_RS13385 3a3a8d372f7b3ab497087132ef4bcbe7 480 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 13 192 1.4E-20 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SCD_RS13385 3a3a8d372f7b3ab497087132ef4bcbe7 480 SUPERFAMILY SSF52540 1 196 3.54E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13385 3a3a8d372f7b3ab497087132ef4bcbe7 480 SUPERFAMILY SSF52317 249 460 1.92E-36 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SCD_RS13385 3a3a8d372f7b3ab497087132ef4bcbe7 480 Gene3D G3DSA:3.40.50.300 1 193 7.9E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13385 3a3a8d372f7b3ab497087132ef4bcbe7 480 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 5 457 4.7E-136 T 22-04-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 SCD_RS13385 3a3a8d372f7b3ab497087132ef4bcbe7 480 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 250 442 2.0E-38 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 SCD_RS13385 3a3a8d372f7b3ab497087132ef4bcbe7 480 PANTHER PTHR21343:SF6 253 464 5.8E-135 T 22-04-2016 SCD_RS13385 3a3a8d372f7b3ab497087132ef4bcbe7 480 PANTHER PTHR21343:SF6 1 234 5.8E-135 T 22-04-2016 SCD_RS13385 3a3a8d372f7b3ab497087132ef4bcbe7 480 Hamap MF_00027 Cobyrinate a,c-diamide synthase [cbiA]. 1 448 39.04 T 22-04-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 SCD_RS13385 3a3a8d372f7b3ab497087132ef4bcbe7 480 Gene3D G3DSA:3.40.50.880 250 461 2.7E-29 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SCD_RS13385 3a3a8d372f7b3ab497087132ef4bcbe7 480 PANTHER PTHR21343 253 464 5.8E-135 T 22-04-2016 SCD_RS13385 3a3a8d372f7b3ab497087132ef4bcbe7 480 PANTHER PTHR21343 1 234 5.8E-135 T 22-04-2016 SCD_RS08910 d4d97e63c6bff674b004b31c95d00c0a 394 PANTHER PTHR10264:SF51 4 387 1.8E-117 T 22-04-2016 IPR010201 HflK GO:0016021 SCD_RS08910 d4d97e63c6bff674b004b31c95d00c0a 394 Pfam PF01145 SPFH domain / Band 7 family 75 260 9.3E-25 T 22-04-2016 IPR001107 Band 7 domain SCD_RS08910 d4d97e63c6bff674b004b31c95d00c0a 394 PANTHER PTHR10264 4 387 1.8E-117 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SCD_RS08910 d4d97e63c6bff674b004b31c95d00c0a 394 Pfam PF12221 Bacterial membrane protein N terminal 1 37 3.6E-14 T 22-04-2016 IPR020980 Menbrane protein HflK, N-terminal SCD_RS08910 d4d97e63c6bff674b004b31c95d00c0a 394 SUPERFAMILY SSF117892 139 251 2.22E-18 T 22-04-2016 IPR001107 Band 7 domain SCD_RS08910 d4d97e63c6bff674b004b31c95d00c0a 394 SMART SM00244 72 245 4.0E-20 T 22-04-2016 IPR001107 Band 7 domain SCD_RS08910 d4d97e63c6bff674b004b31c95d00c0a 394 TIGRFAM TIGR01933 hflK: HflK protein 74 347 1.1E-93 T 22-04-2016 IPR010201 HflK GO:0016021 SCD_RS04800 5a5d3ebba5b7e971c8f9ef0e2541fb68 197 Pfam PF14803 Nudix N-terminal 2 35 1.1E-15 T 22-04-2016 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.-+3.6.1.13|KEGG: 00332+3.6.1.-|KEGG: 00740+3.6.1.18|KEGG: 00790+3.6.1.- SCD_RS04800 5a5d3ebba5b7e971c8f9ef0e2541fb68 197 PANTHER PTHR22769 1 174 9.8E-76 T 22-04-2016 SCD_RS04800 5a5d3ebba5b7e971c8f9ef0e2541fb68 197 PANTHER PTHR22769:SF17 1 174 9.8E-76 T 22-04-2016 SCD_RS04800 5a5d3ebba5b7e971c8f9ef0e2541fb68 197 SUPERFAMILY SSF55811 2 166 1.3E-38 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SCD_RS04800 5a5d3ebba5b7e971c8f9ef0e2541fb68 197 ProSitePatterns PS00893 Nudix box signature. 70 91 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SCD_RS04800 5a5d3ebba5b7e971c8f9ef0e2541fb68 197 Pfam PF00293 NUDIX domain 41 141 9.8E-12 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SCD_RS04800 5a5d3ebba5b7e971c8f9ef0e2541fb68 197 Gene3D G3DSA:3.90.79.10 36 172 1.5E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SCD_RS04800 5a5d3ebba5b7e971c8f9ef0e2541fb68 197 Gene3D G3DSA:2.20.70.10 1 35 1.3E-16 T 22-04-2016 SCD_RS07970 72c9f62e12df09517a9ada086e6da617 427 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 425 2.0E-208 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS07970 72c9f62e12df09517a9ada086e6da617 427 Gene3D G3DSA:3.30.390.10 4 126 1.2E-54 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SCD_RS07970 72c9f62e12df09517a9ada086e6da617 427 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 424 2.2E-130 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SCD_RS07970 72c9f62e12df09517a9ada086e6da617 427 SMART SM01192 139 425 1.6E-216 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SCD_RS07970 72c9f62e12df09517a9ada086e6da617 427 Hamap MF_00318 Enolase [eno]. 2 411 45.153 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS07970 72c9f62e12df09517a9ada086e6da617 427 SUPERFAMILY SSF54826 3 136 2.3E-55 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SCD_RS07970 72c9f62e12df09517a9ada086e6da617 427 SMART SM01193 4 134 3.6E-94 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SCD_RS07970 72c9f62e12df09517a9ada086e6da617 427 PANTHER PTHR11902 1 421 5.3E-251 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS07970 72c9f62e12df09517a9ada086e6da617 427 SUPERFAMILY SSF51604 140 425 1.4E-126 T 22-04-2016 IPR029065 Enolase C-terminal domain-like SCD_RS07970 72c9f62e12df09517a9ada086e6da617 427 Pfam PF03952 Enolase, N-terminal domain 4 134 5.0E-59 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SCD_RS07970 72c9f62e12df09517a9ada086e6da617 427 PRINTS PR00148 Enolase signature 334 348 1.3E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS07970 72c9f62e12df09517a9ada086e6da617 427 PRINTS PR00148 Enolase signature 107 123 1.3E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS07970 72c9f62e12df09517a9ada086e6da617 427 PRINTS PR00148 Enolase signature 363 380 1.3E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS07970 72c9f62e12df09517a9ada086e6da617 427 PRINTS PR00148 Enolase signature 161 174 1.3E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS07970 72c9f62e12df09517a9ada086e6da617 427 PRINTS PR00148 Enolase signature 37 51 1.3E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS07970 72c9f62e12df09517a9ada086e6da617 427 PRINTS PR00148 Enolase signature 311 322 1.3E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS07970 72c9f62e12df09517a9ada086e6da617 427 PIRSF PIRSF001400 1 425 9.9E-190 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS07970 72c9f62e12df09517a9ada086e6da617 427 ProSitePatterns PS00164 Enolase signature. 334 347 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS07970 72c9f62e12df09517a9ada086e6da617 427 Gene3D G3DSA:3.20.20.120 128 424 9.0E-135 T 22-04-2016 IPR029065 Enolase C-terminal domain-like SCD_RS05460 bb988ff1bfc32a04b241ab4881a53688 689 Pfam PF00593 TonB dependent receptor 450 688 3.1E-25 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SCD_RS05460 bb988ff1bfc32a04b241ab4881a53688 689 Gene3D G3DSA:2.170.130.10 70 195 6.0E-30 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SCD_RS05460 bb988ff1bfc32a04b241ab4881a53688 689 SUPERFAMILY SSF56935 73 689 7.33E-93 T 22-04-2016 SCD_RS05460 bb988ff1bfc32a04b241ab4881a53688 689 Pfam PF07715 TonB-dependent Receptor Plug Domain 82 192 1.2E-18 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SCD_RS05460 bb988ff1bfc32a04b241ab4881a53688 689 PANTHER PTHR32552 5 689 1.2E-41 T 22-04-2016 SCD_RS05460 bb988ff1bfc32a04b241ab4881a53688 689 Gene3D G3DSA:2.40.170.20 196 689 1.5E-70 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SCD_RS05460 bb988ff1bfc32a04b241ab4881a53688 689 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 672 689 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site SCD_RS03320 b9fe892b3980c9fca4cdc2d59b19d1fa 388 Hamap MF_01917 Cardiolipin synthase B [clsB]. 1 385 46.926 T 22-04-2016 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 SCD_RS03320 b9fe892b3980c9fca4cdc2d59b19d1fa 388 SMART SM00155 287 314 0.034 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SCD_RS03320 b9fe892b3980c9fca4cdc2d59b19d1fa 388 SMART SM00155 105 132 0.014 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SCD_RS03320 b9fe892b3980c9fca4cdc2d59b19d1fa 388 Pfam PF13091 PLD-like domain 215 336 1.8E-23 T 22-04-2016 IPR025202 Phospholipase D-like domain SCD_RS03320 b9fe892b3980c9fca4cdc2d59b19d1fa 388 Pfam PF13091 PLD-like domain 25 129 2.2E-12 T 22-04-2016 IPR025202 Phospholipase D-like domain SCD_RS03320 b9fe892b3980c9fca4cdc2d59b19d1fa 388 PANTHER PTHR21248 1 382 2.1E-86 T 22-04-2016 SCD_RS03320 b9fe892b3980c9fca4cdc2d59b19d1fa 388 Gene3D G3DSA:3.30.870.10 209 372 3.3E-34 T 22-04-2016 SCD_RS03320 b9fe892b3980c9fca4cdc2d59b19d1fa 388 Gene3D G3DSA:3.30.870.10 3 183 4.7E-41 T 22-04-2016 SCD_RS03320 b9fe892b3980c9fca4cdc2d59b19d1fa 388 PANTHER PTHR21248:SF5 1 382 2.1E-86 T 22-04-2016 SCD_RS03320 b9fe892b3980c9fca4cdc2d59b19d1fa 388 SUPERFAMILY SSF56024 3 166 6.02E-40 T 22-04-2016 SCD_RS03320 b9fe892b3980c9fca4cdc2d59b19d1fa 388 SUPERFAMILY SSF56024 162 355 8.3E-41 T 22-04-2016 SCD_RS15685 6cd099c323689ed1296f64f1c04e359e 848 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 3 347 5.6E-80 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SCD_RS15685 6cd099c323689ed1296f64f1c04e359e 848 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 3.8E-22 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SCD_RS15685 6cd099c323689ed1296f64f1c04e359e 848 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 3.8E-22 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SCD_RS15685 6cd099c323689ed1296f64f1c04e359e 848 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 3.8E-22 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SCD_RS15685 6cd099c323689ed1296f64f1c04e359e 848 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 3.8E-22 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SCD_RS15685 6cd099c323689ed1296f64f1c04e359e 848 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 3.8E-22 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SCD_RS15685 6cd099c323689ed1296f64f1c04e359e 848 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 3.8E-22 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SCD_RS15685 6cd099c323689ed1296f64f1c04e359e 848 PRINTS PR01005 Flagellar hook-associated protein signature 259 281 3.8E-22 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SCD_RS15685 6cd099c323689ed1296f64f1c04e359e 848 SUPERFAMILY SSF64518 132 440 1.7E-18 T 22-04-2016 SCD_RS15685 6cd099c323689ed1296f64f1c04e359e 848 PANTHER PTHR30033 1 496 7.0E-96 T 22-04-2016 SCD_RS15685 6cd099c323689ed1296f64f1c04e359e 848 PANTHER PTHR30033 715 848 7.0E-96 T 22-04-2016 SCD_RS15685 6cd099c323689ed1296f64f1c04e359e 848 SUPERFAMILY SSF64518 558 846 7.06E-28 T 22-04-2016 SCD_RS15685 6cd099c323689ed1296f64f1c04e359e 848 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 798 846 3.5E-9 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SCD_RS15685 6cd099c323689ed1296f64f1c04e359e 848 PANTHER PTHR30033:SF1 1 496 7.0E-96 T 22-04-2016 SCD_RS15685 6cd099c323689ed1296f64f1c04e359e 848 PANTHER PTHR30033:SF1 715 848 7.0E-96 T 22-04-2016 SCD_RS15685 6cd099c323689ed1296f64f1c04e359e 848 Pfam PF00460 Flagella basal body rod protein 6 33 6.1E-7 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SCD_RS03060 f8e3b6aa7764735f46b586840653b4b2 174 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 23 159 0.001 T 22-04-2016 SCD_RS03060 f8e3b6aa7764735f46b586840653b4b2 174 SUPERFAMILY SSF160369 4 171 1.14E-54 T 22-04-2016 SCD_RS03060 f8e3b6aa7764735f46b586840653b4b2 174 Pfam PF00466 Ribosomal protein L10 5 100 2.9E-25 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 SCD_RS03060 f8e3b6aa7764735f46b586840653b4b2 174 PANTHER PTHR11560 3 172 3.2E-53 T 22-04-2016 SCD_RS03060 f8e3b6aa7764735f46b586840653b4b2 174 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 160 26.097 T 22-04-2016 IPR022973 Ribosomal protein L10 SCD_RS08115 2c2f769c277bf8ca1b7e75e5fa854ba2 481 PANTHER PTHR11999:SF70 7 466 4.8E-133 T 22-04-2016 SCD_RS08115 2c2f769c277bf8ca1b7e75e5fa854ba2 481 Gene3D G3DSA:3.40.640.10 91 365 3.4E-89 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS08115 2c2f769c277bf8ca1b7e75e5fa854ba2 481 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 43 413 1.6E-68 T 22-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 SCD_RS08115 2c2f769c277bf8ca1b7e75e5fa854ba2 481 SUPERFAMILY SSF53383 11 471 9.07E-123 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS08115 2c2f769c277bf8ca1b7e75e5fa854ba2 481 Gene3D G3DSA:3.90.1150.10 366 472 1.8E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS08115 2c2f769c277bf8ca1b7e75e5fa854ba2 481 Gene3D G3DSA:1.20.1340.10 11 88 4.3E-17 T 22-04-2016 SCD_RS08115 2c2f769c277bf8ca1b7e75e5fa854ba2 481 PANTHER PTHR11999 7 466 4.8E-133 T 22-04-2016 SCD_RS08115 2c2f769c277bf8ca1b7e75e5fa854ba2 481 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 294 315 - T 22-04-2016 IPR021115 Pyridoxal-phosphate binding site GO:0016831 SCD_RS08115 2c2f769c277bf8ca1b7e75e5fa854ba2 481 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 394 413 6.1E-20 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 SCD_RS08115 2c2f769c277bf8ca1b7e75e5fa854ba2 481 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 81 100 6.1E-20 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 SCD_RS08115 2c2f769c277bf8ca1b7e75e5fa854ba2 481 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 351 366 6.1E-20 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 SCD_RS08115 2c2f769c277bf8ca1b7e75e5fa854ba2 481 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 119 138 6.1E-20 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 SCD_RS08115 2c2f769c277bf8ca1b7e75e5fa854ba2 481 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 15 34 6.1E-20 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 SCD_RS08115 2c2f769c277bf8ca1b7e75e5fa854ba2 481 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 55 74 6.1E-20 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 SCD_RS01485 abf0d2f57155087556c850e0915f1721 834 SUPERFAMILY SSF53756 21 828 0.0 T 22-04-2016 SCD_RS01485 abf0d2f57155087556c850e0915f1721 834 PIRSF PIRSF000460 20 830 9.1E-228 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SCD_RS01485 abf0d2f57155087556c850e0915f1721 834 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 25 825 0.0 T 22-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SCD_RS01485 abf0d2f57155087556c850e0915f1721 834 PANTHER PTHR11468 23 829 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SCD_RS01485 abf0d2f57155087556c850e0915f1721 834 Gene3D G3DSA:3.40.50.2000 23 495 9.1E-213 T 22-04-2016 SCD_RS01485 abf0d2f57155087556c850e0915f1721 834 Pfam PF00343 Carbohydrate phosphorylase 113 825 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SCD_RS01485 abf0d2f57155087556c850e0915f1721 834 Gene3D G3DSA:3.40.50.2000 496 810 5.7E-131 T 22-04-2016 SCD_RS01485 abf0d2f57155087556c850e0915f1721 834 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 670 682 - T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SCD_RS01485 abf0d2f57155087556c850e0915f1721 834 PANTHER PTHR11468:SF3 23 829 0.0 T 22-04-2016 SCD_RS06320 b607dc8f7f3943fc61da2837092dcec2 167 SUPERFAMILY SSF52540 1 130 1.44E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06320 b607dc8f7f3943fc61da2837092dcec2 167 PANTHER PTHR40072:SF2 2 58 4.9E-15 T 22-04-2016 SCD_RS06320 b607dc8f7f3943fc61da2837092dcec2 167 PANTHER PTHR40072 2 58 4.9E-15 T 22-04-2016 SCD_RS06320 b607dc8f7f3943fc61da2837092dcec2 167 Gene3D G3DSA:3.40.50.300 1 160 1.5E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06320 b607dc8f7f3943fc61da2837092dcec2 167 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 3 159 4.8E-46 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 SCD_RS06320 b607dc8f7f3943fc61da2837092dcec2 167 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 3 135 9.0E-51 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 SCD_RS12630 b81fc4313462cce915cef1a86f25f7f8 246 PANTHER PTHR35272 1 240 1.7E-42 T 22-04-2016 SCD_RS12630 b81fc4313462cce915cef1a86f25f7f8 246 SUPERFAMILY SSF52833 98 240 1.95E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS12630 b81fc4313462cce915cef1a86f25f7f8 246 Pfam PF13098 Thioredoxin-like domain 115 239 8.4E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS12630 b81fc4313462cce915cef1a86f25f7f8 246 SUPERFAMILY SSF54423 35 90 9.61E-10 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal SCD_RS12630 b81fc4313462cce915cef1a86f25f7f8 246 Gene3D G3DSA:3.40.30.10 112 241 2.5E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS12630 b81fc4313462cce915cef1a86f25f7f8 246 Gene3D G3DSA:3.10.450.70 32 91 1.4E-13 T 22-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal SCD_RS12630 b81fc4313462cce915cef1a86f25f7f8 246 Pfam PF10411 Disulfide bond isomerase protein N-terminus 33 86 2.0E-18 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal SCD_RS02245 5821d8e7ce621521ab3d617681e147be 344 SUPERFAMILY SSF54862 84 102 5.65E-9 T 22-04-2016 SCD_RS02245 5821d8e7ce621521ab3d617681e147be 344 SUPERFAMILY SSF54862 151 276 5.65E-9 T 22-04-2016 SCD_RS02245 5821d8e7ce621521ab3d617681e147be 344 PANTHER PTHR30176 17 280 3.5E-12 T 22-04-2016 SCD_RS02245 5821d8e7ce621521ab3d617681e147be 344 Pfam PF12801 4Fe-4S binding domain 185 224 0.34 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS02245 5821d8e7ce621521ab3d617681e147be 344 Pfam PF12801 4Fe-4S binding domain 72 116 1.6E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS02245 5821d8e7ce621521ab3d617681e147be 344 Gene3D G3DSA:3.30.70.20 233 277 1.1E-7 T 22-04-2016 SCD_RS13505 74b7e5d02d40b3cc6afb5b57eac288b4 229 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 220 34.558 T 22-04-2016 IPR007432 Protein of unknown function DUF480 SCD_RS13505 74b7e5d02d40b3cc6afb5b57eac288b4 229 Gene3D G3DSA:1.10.10.10 3 87 9.4E-38 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS13505 74b7e5d02d40b3cc6afb5b57eac288b4 229 Pfam PF04337 Protein of unknown function, DUF480 5 158 4.4E-64 T 22-04-2016 IPR007432 Protein of unknown function DUF480 SCD_RS13505 74b7e5d02d40b3cc6afb5b57eac288b4 229 SUPERFAMILY SSF46785 3 84 1.05E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS13505 74b7e5d02d40b3cc6afb5b57eac288b4 229 PANTHER PTHR38768:SF1 1 224 6.6E-84 T 22-04-2016 SCD_RS13505 74b7e5d02d40b3cc6afb5b57eac288b4 229 Gene3D G3DSA:1.10.10.10 95 171 7.8E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS13505 74b7e5d02d40b3cc6afb5b57eac288b4 229 SUPERFAMILY SSF46785 90 171 1.44E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS13505 74b7e5d02d40b3cc6afb5b57eac288b4 229 PANTHER PTHR38768 1 224 6.6E-84 T 22-04-2016 SCD_RS10815 aa5892353c9f4695c144cd524e6329fe 407 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 402 1.7E-143 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SCD_RS10815 aa5892353c9f4695c144cd524e6329fe 407 PANTHER PTHR11587:SF2 1 407 4.8E-230 T 22-04-2016 SCD_RS10815 aa5892353c9f4695c144cd524e6329fe 407 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SCD_RS10815 aa5892353c9f4695c144cd524e6329fe 407 Pfam PF00764 Arginosuccinate synthase 8 401 2.3E-154 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SCD_RS10815 aa5892353c9f4695c144cd524e6329fe 407 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 406 51.553 T 22-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SCD_RS10815 aa5892353c9f4695c144cd524e6329fe 407 Gene3D G3DSA:3.40.50.620 5 163 2.0E-67 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS10815 aa5892353c9f4695c144cd524e6329fe 407 Gene3D G3DSA:1.20.5.470 377 400 6.7E-7 T 22-04-2016 SCD_RS10815 aa5892353c9f4695c144cd524e6329fe 407 Gene3D G3DSA:3.90.1260.10 164 362 3.3E-95 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SCD_RS10815 aa5892353c9f4695c144cd524e6329fe 407 SUPERFAMILY SSF69864 180 404 2.49E-93 T 22-04-2016 SCD_RS10815 aa5892353c9f4695c144cd524e6329fe 407 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 120 131 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SCD_RS10815 aa5892353c9f4695c144cd524e6329fe 407 PANTHER PTHR11587 1 407 4.8E-230 T 22-04-2016 SCD_RS10815 aa5892353c9f4695c144cd524e6329fe 407 SUPERFAMILY SSF52402 5 170 3.75E-47 T 22-04-2016 SCD_RS14400 e729be5ba951b2215b8536c6bfcc467e 295 Pfam PF04321 RmlD substrate binding domain 3 288 8.7E-103 T 22-04-2016 IPR029903 RmlD-like substrate binding domain SCD_RS14400 e729be5ba951b2215b8536c6bfcc467e 295 Gene3D G3DSA:3.40.50.720 2 230 7.8E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS14400 e729be5ba951b2215b8536c6bfcc467e 295 PANTHER PTHR10491 2 295 7.2E-96 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family SCD_RS14400 e729be5ba951b2215b8536c6bfcc467e 295 PANTHER PTHR10491:SF4 2 295 7.2E-96 T 22-04-2016 SCD_RS14400 e729be5ba951b2215b8536c6bfcc467e 295 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 287 2.4E-100 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family SCD_RS14400 e729be5ba951b2215b8536c6bfcc467e 295 SUPERFAMILY SSF51735 3 288 1.31E-93 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS06920 3b902dbdabfb6b116fc86c517cfe9809 267 Gene3D G3DSA:2.170.230.10 132 189 4.7E-5 T 22-04-2016 IPR019766 Peptidase S26A, all-beta subdomain SCD_RS06920 3b902dbdabfb6b116fc86c517cfe9809 267 ProSitePatterns PS00760 Signal peptidases I lysine active site. 124 136 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 SCD_RS06920 3b902dbdabfb6b116fc86c517cfe9809 267 ProSitePatterns PS00501 Signal peptidases I serine active site. 67 74 - T 22-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 SCD_RS06920 3b902dbdabfb6b116fc86c517cfe9809 267 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 43 257 6.5E-52 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SCD_RS06920 3b902dbdabfb6b116fc86c517cfe9809 267 Pfam PF00717 Peptidase S24-like 64 146 2.3E-22 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B SCD_RS06920 3b902dbdabfb6b116fc86c517cfe9809 267 SUPERFAMILY SSF51306 56 262 2.82E-70 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SCD_RS06920 3b902dbdabfb6b116fc86c517cfe9809 267 Gene3D G3DSA:2.10.109.10 55 131 2.2E-57 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SCD_RS06920 3b902dbdabfb6b116fc86c517cfe9809 267 Gene3D G3DSA:2.10.109.10 216 262 2.2E-57 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SCD_RS06920 3b902dbdabfb6b116fc86c517cfe9809 267 ProSitePatterns PS00761 Signal peptidases I signature 3. 221 234 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 SCD_RS06920 3b902dbdabfb6b116fc86c517cfe9809 267 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 122 134 1.2E-24 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SCD_RS06920 3b902dbdabfb6b116fc86c517cfe9809 267 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 216 235 1.2E-24 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SCD_RS06920 3b902dbdabfb6b116fc86c517cfe9809 267 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 58 74 1.2E-24 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SCD_RS06920 3b902dbdabfb6b116fc86c517cfe9809 267 PANTHER PTHR12383:SF27 6 168 1.5E-91 T 22-04-2016 SCD_RS06920 3b902dbdabfb6b116fc86c517cfe9809 267 PANTHER PTHR12383:SF27 201 262 1.5E-91 T 22-04-2016 SCD_RS06920 3b902dbdabfb6b116fc86c517cfe9809 267 PANTHER PTHR12383 6 168 1.5E-91 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SCD_RS06920 3b902dbdabfb6b116fc86c517cfe9809 267 PANTHER PTHR12383 201 262 1.5E-91 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SCD_RS06920 3b902dbdabfb6b116fc86c517cfe9809 267 Pfam PF10502 Signal peptidase, peptidase S26 214 253 6.1E-7 T 22-04-2016 IPR019533 Peptidase S26 SCD_RS03375 8544219551e848acec4aaa799975205f 258 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 137 254 7.4E-39 T 22-04-2016 IPR014162 Tol-Pal system, YbgF SCD_RS03375 8544219551e848acec4aaa799975205f 258 PANTHER PTHR26312:SF74 149 254 4.2E-17 T 22-04-2016 SCD_RS03375 8544219551e848acec4aaa799975205f 258 PANTHER PTHR26312 149 254 4.2E-17 T 22-04-2016 SCD_RS03375 8544219551e848acec4aaa799975205f 258 Pfam PF16331 TolA binding protein trimerisation 42 109 3.4E-21 T 22-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 SCD_RS03375 8544219551e848acec4aaa799975205f 258 SUPERFAMILY SSF48452 140 243 3.52E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS03375 8544219551e848acec4aaa799975205f 258 Pfam PF13525 Outer membrane lipoprotein 136 255 2.0E-10 T 22-04-2016 SCD_RS03375 8544219551e848acec4aaa799975205f 258 Gene3D G3DSA:1.25.40.10 140 242 3.3E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS11825 5ec751a3d3125e5e7b64493c3243007b 302 SUPERFAMILY SSF51735 9 300 4.59E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS11825 5ec751a3d3125e5e7b64493c3243007b 302 PRINTS PR01713 Nucleotide sugar epimerase signature 225 240 1.7E-6 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SCD_RS11825 5ec751a3d3125e5e7b64493c3243007b 302 PRINTS PR01713 Nucleotide sugar epimerase signature 204 219 1.7E-6 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SCD_RS11825 5ec751a3d3125e5e7b64493c3243007b 302 PRINTS PR01713 Nucleotide sugar epimerase signature 264 281 1.7E-6 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SCD_RS11825 5ec751a3d3125e5e7b64493c3243007b 302 Gene3D G3DSA:3.40.50.720 9 295 2.0E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS11825 5ec751a3d3125e5e7b64493c3243007b 302 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 231 2.1E-39 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SCD_RS11825 5ec751a3d3125e5e7b64493c3243007b 302 PANTHER PTHR10366 4 295 2.1E-67 T 22-04-2016 SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 Gene3D G3DSA:3.40.50.2300 9 141 2.5E-21 T 22-04-2016 SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 Gene3D G3DSA:3.30.450.20 265 382 2.0E-14 T 22-04-2016 SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 Gene3D G3DSA:3.30.450.20 142 259 3.7E-20 T 22-04-2016 SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 Pfam PF00563 EAL domain 573 808 1.7E-77 T 22-04-2016 IPR001633 EAL domain SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 SMART SM00448 10 124 3.7E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 145 266 1.7E-10 T 22-04-2016 IPR000014 PAS domain SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 266 391 2.7E-12 T 22-04-2016 IPR000014 PAS domain SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 PANTHER PTHR33121:SF13 377 391 3.4E-87 T 22-04-2016 SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 PANTHER PTHR33121:SF13 519 820 3.4E-87 T 22-04-2016 SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 Gene3D G3DSA:3.20.20.450 571 821 1.2E-106 T 22-04-2016 IPR001633 EAL domain SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 SUPERFAMILY SSF55785 280 391 1.61E-16 T 22-04-2016 IPR000014 PAS domain SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 Pfam PF00072 Response regulator receiver domain 12 113 9.2E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 Gene3D G3DSA:3.30.70.270 397 564 3.2E-49 T 22-04-2016 SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 PANTHER PTHR33121 377 391 3.4E-87 T 22-04-2016 SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 PANTHER PTHR33121 519 820 3.4E-87 T 22-04-2016 SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 SUPERFAMILY SSF141868 573 821 4.32E-96 T 22-04-2016 IPR001633 EAL domain SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 SMART SM00267 384 557 7.3E-49 T 22-04-2016 IPR000160 GGDEF domain SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 Pfam PF00990 Diguanylate cyclase, GGDEF domain 395 552 1.2E-37 T 22-04-2016 IPR000160 GGDEF domain SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 SUPERFAMILY SSF55785 137 259 4.89E-20 T 22-04-2016 IPR000014 PAS domain SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 SUPERFAMILY SSF52172 9 167 1.11E-22 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 394 555 1.8E-31 T 22-04-2016 IPR000160 GGDEF domain SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 SMART SM00091 149 216 0.0019 T 22-04-2016 IPR000014 PAS domain SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 SMART SM00091 269 337 0.0043 T 22-04-2016 IPR000014 PAS domain SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 SMART SM00086 221 261 150.0 T 22-04-2016 IPR001610 PAC motif SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 SMART SM00086 342 384 0.11 T 22-04-2016 IPR001610 PAC motif SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 SUPERFAMILY SSF55073 400 559 1.44E-44 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 Pfam PF08448 PAS fold 158 262 4.4E-11 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 Pfam PF08448 PAS fold 276 386 1.5E-6 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS09215 76864f670f1e173cf904483e0a9ea48e 828 SMART SM00052 567 813 2.8E-130 T 22-04-2016 IPR001633 EAL domain SCD_RS04695 d1c68c97352dc62e7dbebe722b392267 421 PANTHER PTHR11780:SF10 5 421 1.3E-224 T 22-04-2016 SCD_RS04695 d1c68c97352dc62e7dbebe722b392267 421 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 341 352 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 SCD_RS04695 d1c68c97352dc62e7dbebe722b392267 421 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 6 414 1.9E-198 T 22-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 SCD_RS04695 d1c68c97352dc62e7dbebe722b392267 421 SUPERFAMILY SSF142019 5 239 6.93E-85 T 22-04-2016 SCD_RS04695 d1c68c97352dc62e7dbebe722b392267 421 SUPERFAMILY SSF142984 240 323 4.32E-26 T 22-04-2016 SCD_RS04695 d1c68c97352dc62e7dbebe722b392267 421 Pfam PF10531 SLBB domain 242 290 1.4E-14 T 22-04-2016 IPR019554 Soluble ligand binding domain SCD_RS04695 d1c68c97352dc62e7dbebe722b392267 421 Gene3D G3DSA:3.10.560.10 242 275 8.1E-4 T 22-04-2016 SCD_RS04695 d1c68c97352dc62e7dbebe722b392267 421 SMART SM00928 328 373 4.9E-25 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 SCD_RS04695 d1c68c97352dc62e7dbebe722b392267 421 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 47 218 2.1E-46 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain SCD_RS04695 d1c68c97352dc62e7dbebe722b392267 421 SUPERFAMILY SSF140490 324 420 4.45E-38 T 22-04-2016 SCD_RS04695 d1c68c97352dc62e7dbebe722b392267 421 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 331 413 5.9E-30 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 SCD_RS04695 d1c68c97352dc62e7dbebe722b392267 421 PANTHER PTHR11780 5 421 1.3E-224 T 22-04-2016 SCD_RS01665 1084316d5b857617edf030bf8ea76a2e 216 SUPERFAMILY SSF46894 139 211 4.42E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SCD_RS01665 1084316d5b857617edf030bf8ea76a2e 216 PANTHER PTHR26402 5 210 2.9E-68 T 22-04-2016 SCD_RS01665 1084316d5b857617edf030bf8ea76a2e 216 Gene3D G3DSA:3.40.50.2300 3 155 2.0E-34 T 22-04-2016 SCD_RS01665 1084316d5b857617edf030bf8ea76a2e 216 SMART SM00448 5 118 6.9E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS01665 1084316d5b857617edf030bf8ea76a2e 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 1.7E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS01665 1084316d5b857617edf030bf8ea76a2e 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 1.7E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS01665 1084316d5b857617edf030bf8ea76a2e 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 1.7E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS01665 1084316d5b857617edf030bf8ea76a2e 216 SUPERFAMILY SSF52172 4 132 2.13E-29 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS01665 1084316d5b857617edf030bf8ea76a2e 216 Pfam PF00072 Response regulator receiver domain 7 117 4.9E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS01665 1084316d5b857617edf030bf8ea76a2e 216 PANTHER PTHR26402:SF151 5 210 2.9E-68 T 22-04-2016 SCD_RS01665 1084316d5b857617edf030bf8ea76a2e 216 SMART SM00421 149 206 4.7E-24 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS01665 1084316d5b857617edf030bf8ea76a2e 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS01665 1084316d5b857617edf030bf8ea76a2e 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 1.7E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS01665 1084316d5b857617edf030bf8ea76a2e 216 Gene3D G3DSA:1.10.10.10 156 211 4.5E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS11065 3802d548e3e198586a0be36b8d897974 281 Gene3D G3DSA:3.40.50.1820 2 277 4.0E-74 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SCD_RS11065 3802d548e3e198586a0be36b8d897974 281 Pfam PF00756 Putative esterase 22 270 5.1E-61 T 22-04-2016 IPR000801 Putative esterase SCD_RS11065 3802d548e3e198586a0be36b8d897974 281 SUPERFAMILY SSF53474 2 277 3.72E-82 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SCD_RS11065 3802d548e3e198586a0be36b8d897974 281 PANTHER PTHR10061 1 280 7.0E-167 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 SCD_RS11065 3802d548e3e198586a0be36b8d897974 281 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 5 277 1.8E-122 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 SCD_RS11860 90066b1b7af006e331ffeff9815989b1 238 Pfam PF00685 Sulfotransferase domain 84 194 3.8E-5 T 22-04-2016 IPR000863 Sulfotransferase domain GO:0008146 SCD_RS11860 90066b1b7af006e331ffeff9815989b1 238 SUPERFAMILY SSF52540 37 198 9.87E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11860 90066b1b7af006e331ffeff9815989b1 238 Gene3D G3DSA:3.40.50.300 38 203 8.6E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00175 c2957bc27660361af0948ddf3694385d 440 PRINTS PR00175 Sodium/alanine symporter signature 406 426 4.8E-55 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SCD_RS00175 c2957bc27660361af0948ddf3694385d 440 PRINTS PR00175 Sodium/alanine symporter signature 208 227 4.8E-55 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SCD_RS00175 c2957bc27660361af0948ddf3694385d 440 PRINTS PR00175 Sodium/alanine symporter signature 90 112 4.8E-55 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SCD_RS00175 c2957bc27660361af0948ddf3694385d 440 PRINTS PR00175 Sodium/alanine symporter signature 180 198 4.8E-55 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SCD_RS00175 c2957bc27660361af0948ddf3694385d 440 PRINTS PR00175 Sodium/alanine symporter signature 347 369 4.8E-55 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SCD_RS00175 c2957bc27660361af0948ddf3694385d 440 PRINTS PR00175 Sodium/alanine symporter signature 303 321 4.8E-55 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SCD_RS00175 c2957bc27660361af0948ddf3694385d 440 PANTHER PTHR30330 1 440 6.2E-210 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SCD_RS00175 c2957bc27660361af0948ddf3694385d 440 PANTHER PTHR30330:SF3 1 440 6.2E-210 T 22-04-2016 SCD_RS00175 c2957bc27660361af0948ddf3694385d 440 Pfam PF01235 Sodium:alanine symporter family 51 439 2.4E-146 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SCD_RS00175 c2957bc27660361af0948ddf3694385d 440 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 437 2.3E-164 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SCD_RS02915 d5f3cd320d2db995e19d772842e1572b 353 Pfam PF00155 Aminotransferase class I and II 25 348 9.8E-56 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SCD_RS02915 d5f3cd320d2db995e19d772842e1572b 353 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 352 55.697 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 SCD_RS02915 d5f3cd320d2db995e19d772842e1572b 353 PANTHER PTHR11751:SF398 3 351 2.7E-113 T 22-04-2016 SCD_RS02915 d5f3cd320d2db995e19d772842e1572b 353 Gene3D G3DSA:3.40.640.10 38 252 6.0E-61 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS02915 d5f3cd320d2db995e19d772842e1572b 353 PANTHER PTHR11751 3 351 2.7E-113 T 22-04-2016 SCD_RS02915 d5f3cd320d2db995e19d772842e1572b 353 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 351 9.8E-90 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 SCD_RS02915 d5f3cd320d2db995e19d772842e1572b 353 Gene3D G3DSA:3.90.1150.10 253 352 8.2E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS02915 d5f3cd320d2db995e19d772842e1572b 353 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 207 216 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 SCD_RS02915 d5f3cd320d2db995e19d772842e1572b 353 SUPERFAMILY SSF53383 4 352 1.41E-75 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS08250 81868c72cc4d91a6e4c2a1d19955b144 400 SUPERFAMILY SSF64383 249 384 3.79E-35 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 SCD_RS08250 81868c72cc4d91a6e4c2a1d19955b144 400 Gene3D G3DSA:3.30.1400.10 249 383 7.9E-35 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 SCD_RS08250 81868c72cc4d91a6e4c2a1d19955b144 400 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 252 379 5.0E-34 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 SCD_RS08250 81868c72cc4d91a6e4c2a1d19955b144 400 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 254 375 5.7E-37 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 SCD_RS08250 81868c72cc4d91a6e4c2a1d19955b144 400 SMART SM00771 250 376 2.7E-44 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 SCD_RS08250 81868c72cc4d91a6e4c2a1d19955b144 400 PANTHER PTHR38685 215 388 1.4E-15 T 22-04-2016 SCD_RS08250 81868c72cc4d91a6e4c2a1d19955b144 400 PANTHER PTHR38685:SF1 215 388 1.4E-15 T 22-04-2016 SCD_RS07585 bc101885cd0b98cbc2bebca046a768bd 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.728 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SCD_RS07585 bc101885cd0b98cbc2bebca046a768bd 78 SUPERFAMILY SSF47336 1 77 8.24E-25 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SCD_RS07585 bc101885cd0b98cbc2bebca046a768bd 78 Gene3D G3DSA:1.10.1200.10 3 77 6.1E-36 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SCD_RS07585 bc101885cd0b98cbc2bebca046a768bd 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 75 2.9E-36 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SCD_RS07585 bc101885cd0b98cbc2bebca046a768bd 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.7E-17 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SCD_RS07585 bc101885cd0b98cbc2bebca046a768bd 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 77 0.002 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SCD_RS07585 bc101885cd0b98cbc2bebca046a768bd 78 PANTHER PTHR20863 4 73 2.4E-29 T 22-04-2016 SCD_RS07585 bc101885cd0b98cbc2bebca046a768bd 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site SCD_RS01530 13792d4d3956ddf4a70fe9af42af9507 219 PANTHER PTHR10108:SF785 44 155 9.1E-17 T 22-04-2016 SCD_RS01530 13792d4d3956ddf4a70fe9af42af9507 219 PANTHER PTHR10108 44 155 9.1E-17 T 22-04-2016 SCD_RS01530 13792d4d3956ddf4a70fe9af42af9507 219 Pfam PF13649 Methyltransferase domain 47 142 7.8E-12 T 22-04-2016 SCD_RS01530 13792d4d3956ddf4a70fe9af42af9507 219 Gene3D G3DSA:3.40.50.150 16 210 9.5E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS01530 13792d4d3956ddf4a70fe9af42af9507 219 SUPERFAMILY SSF53335 15 211 2.46E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS12795 d28ce960eae7a710102c2dcfc53d6b5c 251 Pfam PF08238 Sel1 repeat 64 98 3.1E-8 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS12795 d28ce960eae7a710102c2dcfc53d6b5c 251 Pfam PF08238 Sel1 repeat 29 62 1.7E-6 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS12795 d28ce960eae7a710102c2dcfc53d6b5c 251 Pfam PF08238 Sel1 repeat 103 132 4.7E-7 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS12795 d28ce960eae7a710102c2dcfc53d6b5c 251 Pfam PF08238 Sel1 repeat 172 207 1.4E-8 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS12795 d28ce960eae7a710102c2dcfc53d6b5c 251 Gene3D G3DSA:1.25.40.10 149 214 2.8E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS12795 d28ce960eae7a710102c2dcfc53d6b5c 251 PANTHER PTHR11102 168 217 7.2E-38 T 22-04-2016 SCD_RS12795 d28ce960eae7a710102c2dcfc53d6b5c 251 PANTHER PTHR11102 18 131 7.2E-38 T 22-04-2016 SCD_RS12795 d28ce960eae7a710102c2dcfc53d6b5c 251 SMART SM00671 27 62 2.9E-6 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS12795 d28ce960eae7a710102c2dcfc53d6b5c 251 SMART SM00671 99 134 0.12 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS12795 d28ce960eae7a710102c2dcfc53d6b5c 251 SMART SM00671 63 98 4.2E-11 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS12795 d28ce960eae7a710102c2dcfc53d6b5c 251 SMART SM00671 172 207 9.4E-6 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS12795 d28ce960eae7a710102c2dcfc53d6b5c 251 SUPERFAMILY SSF81901 14 130 2.35E-29 T 22-04-2016 SCD_RS12795 d28ce960eae7a710102c2dcfc53d6b5c 251 SUPERFAMILY SSF81901 92 229 7.32E-22 T 22-04-2016 SCD_RS12795 d28ce960eae7a710102c2dcfc53d6b5c 251 Gene3D G3DSA:1.25.40.10 14 132 3.5E-32 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS04520 904baeb001f05af78b9179558cc144ee 290 Gene3D G3DSA:2.60.200.30 148 260 6.0E-43 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SCD_RS04520 904baeb001f05af78b9179558cc144ee 290 Pfam PF01513 ATP-NAD kinase 33 268 6.4E-59 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SCD_RS04520 904baeb001f05af78b9179558cc144ee 290 SUPERFAMILY SSF111331 7 288 7.06E-89 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain SCD_RS04520 904baeb001f05af78b9179558cc144ee 290 PANTHER PTHR20275 5 290 3.1E-87 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SCD_RS04520 904baeb001f05af78b9179558cc144ee 290 Hamap MF_00361 NAD kinase [nadK]. 6 286 33.959 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SCD_RS04520 904baeb001f05af78b9179558cc144ee 290 Gene3D G3DSA:3.40.50.10330 4 147 1.3E-35 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SCD_RS08660 a5874696106d303164ea67ac79d30ebc 551 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 66 229 1.9E-19 T 22-04-2016 SCD_RS08660 a5874696106d303164ea67ac79d30ebc 551 PANTHER PTHR33908:SF3 4 432 7.6E-81 T 22-04-2016 SCD_RS08660 a5874696106d303164ea67ac79d30ebc 551 PANTHER PTHR33908 4 432 7.6E-81 T 22-04-2016 SCD_RS03910 c429323ad7341873c4e302c6743f050b 851 Gene3D G3DSA:3.30.499.10 671 844 1.0E-49 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS03910 c429323ad7341873c4e302c6743f050b 851 Pfam PF00330 Aconitase family (aconitate hydratase) 460 803 7.1E-38 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS03910 c429323ad7341873c4e302c6743f050b 851 Pfam PF11791 Aconitate B N-terminal domain 4 155 3.2E-59 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SCD_RS03910 c429323ad7341873c4e302c6743f050b 851 Gene3D G3DSA:3.30.499.10 390 507 1.7E-57 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS03910 c429323ad7341873c4e302c6743f050b 851 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 370 1.1E-95 T 22-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SCD_RS03910 c429323ad7341873c4e302c6743f050b 851 SUPERFAMILY SSF52016 162 360 1.43E-61 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SCD_RS03910 c429323ad7341873c4e302c6743f050b 851 Gene3D G3DSA:3.20.19.10 162 349 5.9E-84 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SCD_RS03910 c429323ad7341873c4e302c6743f050b 851 PIRSF PIRSF036687 1 846 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SCD_RS03910 c429323ad7341873c4e302c6743f050b 851 ProSitePatterns PS01244 Aconitase family signature 2. 748 761 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS03910 c429323ad7341873c4e302c6743f050b 851 PANTHER PTHR11670:SF39 293 840 1.6E-304 T 22-04-2016 SCD_RS03910 c429323ad7341873c4e302c6743f050b 851 SUPERFAMILY SSF53732 367 842 1.27E-141 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS03910 c429323ad7341873c4e302c6743f050b 851 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 841 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SCD_RS03910 c429323ad7341873c4e302c6743f050b 851 PANTHER PTHR11670 293 840 1.6E-304 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS03910 c429323ad7341873c4e302c6743f050b 851 Gene3D G3DSA:3.40.1060.10 508 669 7.7E-81 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS03910 c429323ad7341873c4e302c6743f050b 851 ProSitePatterns PS00450 Aconitase family signature 1. 690 707 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS03910 c429323ad7341873c4e302c6743f050b 851 SUPERFAMILY SSF74778 1 159 2.62E-60 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SCD_RS00010 0e3d7e46d81efef6b1e43e368b13d239 373 Pfam PF02767 DNA polymerase III beta subunit, central domain 133 250 6.3E-30 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS00010 0e3d7e46d81efef6b1e43e368b13d239 373 Gene3D G3DSA:3.10.150.10 5 118 3.7E-26 T 22-04-2016 SCD_RS00010 0e3d7e46d81efef6b1e43e368b13d239 373 SUPERFAMILY SSF55979 4 118 5.07E-24 T 22-04-2016 SCD_RS00010 0e3d7e46d81efef6b1e43e368b13d239 373 PANTHER PTHR30478 4 373 3.0E-112 T 22-04-2016 SCD_RS00010 0e3d7e46d81efef6b1e43e368b13d239 373 SUPERFAMILY SSF55979 129 251 1.49E-27 T 22-04-2016 SCD_RS00010 0e3d7e46d81efef6b1e43e368b13d239 373 Gene3D G3DSA:3.10.150.10 127 255 8.0E-35 T 22-04-2016 SCD_RS00010 0e3d7e46d81efef6b1e43e368b13d239 373 SUPERFAMILY SSF55979 252 373 5.56E-37 T 22-04-2016 SCD_RS00010 0e3d7e46d81efef6b1e43e368b13d239 373 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 6 120 2.2E-32 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS00010 0e3d7e46d81efef6b1e43e368b13d239 373 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 5 372 1.4E-96 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS00010 0e3d7e46d81efef6b1e43e368b13d239 373 PIRSF PIRSF000804 2 373 5.6E-110 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS00010 0e3d7e46d81efef6b1e43e368b13d239 373 SMART SM00480 18 369 1.1E-122 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS00010 0e3d7e46d81efef6b1e43e368b13d239 373 Gene3D G3DSA:3.10.150.10 256 373 4.7E-37 T 22-04-2016 SCD_RS00010 0e3d7e46d81efef6b1e43e368b13d239 373 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 253 372 1.4E-34 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS08160 8a20c3f562ea7fd96f2a140309524f5c 559 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 6 102 1.9E-23 T 22-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 SCD_RS08160 8a20c3f562ea7fd96f2a140309524f5c 559 PANTHER PTHR30288:SF0 148 395 2.4E-67 T 22-04-2016 SCD_RS08160 8a20c3f562ea7fd96f2a140309524f5c 559 PANTHER PTHR30288:SF0 469 555 2.4E-67 T 22-04-2016 SCD_RS08160 8a20c3f562ea7fd96f2a140309524f5c 559 PANTHER PTHR30288:SF0 1 126 2.4E-67 T 22-04-2016 SCD_RS08160 8a20c3f562ea7fd96f2a140309524f5c 559 PANTHER PTHR30288 148 395 2.4E-67 T 22-04-2016 SCD_RS08160 8a20c3f562ea7fd96f2a140309524f5c 559 PANTHER PTHR30288 469 555 2.4E-67 T 22-04-2016 SCD_RS08160 8a20c3f562ea7fd96f2a140309524f5c 559 PANTHER PTHR30288 1 126 2.4E-67 T 22-04-2016 SCD_RS08160 8a20c3f562ea7fd96f2a140309524f5c 559 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 240 540 1.3E-46 T 22-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 SCD_RS14630 b5b714414789aa3e2df49fe2824afdb4 335 SUPERFAMILY SSF55729 143 303 4.34E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS14630 b5b714414789aa3e2df49fe2824afdb4 335 Pfam PF13480 Acetyltransferase (GNAT) domain 145 267 3.4E-11 T 22-04-2016 SCD_RS14630 b5b714414789aa3e2df49fe2824afdb4 335 TIGRFAM TIGR03019 pepcterm_femAB: FemAB-related protein, PEP-CTERM system-associated 7 335 1.2E-160 T 22-04-2016 IPR017469 PEP-CTERM system-associated, FemAB-related SCD_RS14630 b5b714414789aa3e2df49fe2824afdb4 335 Gene3D G3DSA:3.40.630.30 91 284 6.5E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS13065 eb50cf09ff33263c5749123fa8291278 287 SUPERFAMILY SSF88659 188 282 3.55E-17 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS13065 eb50cf09ff33263c5749123fa8291278 287 SUPERFAMILY SSF88946 14 123 1.96E-38 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS13065 eb50cf09ff33263c5749123fa8291278 287 PIRSF PIRSF000770 2 287 2.0E-33 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 SCD_RS13065 eb50cf09ff33263c5749123fa8291278 287 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS13065 eb50cf09ff33263c5749123fa8291278 287 PRINTS PR00046 Major sigma-70 factor signature 252 267 4.0E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS13065 eb50cf09ff33263c5749123fa8291278 287 PRINTS PR00046 Major sigma-70 factor signature 232 244 4.0E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS13065 eb50cf09ff33263c5749123fa8291278 287 PRINTS PR00046 Major sigma-70 factor signature 267 278 4.0E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS13065 eb50cf09ff33263c5749123fa8291278 287 PRINTS PR00046 Major sigma-70 factor signature 78 91 4.0E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS13065 eb50cf09ff33263c5749123fa8291278 287 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 78 91 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS13065 eb50cf09ff33263c5749123fa8291278 287 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 283 3.6E-122 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 SCD_RS13065 eb50cf09ff33263c5749123fa8291278 287 PANTHER PTHR30376 3 282 7.3E-106 T 22-04-2016 SCD_RS13065 eb50cf09ff33263c5749123fa8291278 287 Pfam PF04542 Sigma-70 region 2 54 123 8.0E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS13065 eb50cf09ff33263c5749123fa8291278 287 Pfam PF04545 Sigma-70, region 4 228 279 2.0E-15 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS13065 eb50cf09ff33263c5749123fa8291278 287 Gene3D G3DSA:1.10.10.10 224 282 4.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS13065 eb50cf09ff33263c5749123fa8291278 287 Gene3D G3DSA:1.10.601.10 15 123 2.5E-35 T 22-04-2016 SCD_RS13065 eb50cf09ff33263c5749123fa8291278 287 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 49.624 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 SCD_RS13065 eb50cf09ff33263c5749123fa8291278 287 Pfam PF00140 Sigma-70 factor, region 1.2 16 44 1.0E-4 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS13065 eb50cf09ff33263c5749123fa8291278 287 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 281 3.9E-32 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS13875 d7fff5bc819b21d5e27299fa9b5dfe25 523 SUPERFAMILY SSF53649 38 519 1.89E-146 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SCD_RS13875 d7fff5bc819b21d5e27299fa9b5dfe25 523 PANTHER PTHR11596:SF45 41 515 2.9E-220 T 22-04-2016 SCD_RS13875 d7fff5bc819b21d5e27299fa9b5dfe25 523 PRINTS PR00113 Alkaline phosphatase signature 118 133 2.2E-45 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SCD_RS13875 d7fff5bc819b21d5e27299fa9b5dfe25 523 PRINTS PR00113 Alkaline phosphatase signature 322 351 2.2E-45 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SCD_RS13875 d7fff5bc819b21d5e27299fa9b5dfe25 523 PRINTS PR00113 Alkaline phosphatase signature 167 187 2.2E-45 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SCD_RS13875 d7fff5bc819b21d5e27299fa9b5dfe25 523 PRINTS PR00113 Alkaline phosphatase signature 62 82 2.2E-45 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SCD_RS13875 d7fff5bc819b21d5e27299fa9b5dfe25 523 PRINTS PR00113 Alkaline phosphatase signature 228 238 2.2E-45 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SCD_RS13875 d7fff5bc819b21d5e27299fa9b5dfe25 523 Gene3D G3DSA:3.40.720.10 40 521 2.8E-159 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SCD_RS13875 d7fff5bc819b21d5e27299fa9b5dfe25 523 SMART SM00098 63 519 1.1E-162 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SCD_RS13875 d7fff5bc819b21d5e27299fa9b5dfe25 523 Pfam PF00245 Alkaline phosphatase 62 517 3.8E-126 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SCD_RS13875 d7fff5bc819b21d5e27299fa9b5dfe25 523 PANTHER PTHR11596 41 515 2.9E-220 T 22-04-2016 SCD_RS14855 8f407792fc99c87f718a9cb778f86c18 271 SUPERFAMILY SSF89392 86 196 2.12E-5 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX SCD_RS14855 8f407792fc99c87f718a9cb778f86c18 271 SUPERFAMILY SSF89392 228 262 2.12E-5 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX SCD_RS14855 8f407792fc99c87f718a9cb778f86c18 271 PIRSF PIRSF028205 20 271 3.5E-80 T 22-04-2016 IPR011220 Uncharacterised conserved protein UCP028205 SCD_RS14855 8f407792fc99c87f718a9cb778f86c18 271 Gene3D G3DSA:2.50.20.10 47 269 9.6E-63 T 22-04-2016 SCD_RS14855 8f407792fc99c87f718a9cb778f86c18 271 Pfam PF17131 Outer membrane lipoprotein-sorting protein 93 268 5.3E-43 T 22-04-2016 IPR033399 Putative outer membrane lipoprotein-sorting protein SCD_RS04000 52a8079d6809b75a06d0b63fa2eae38f 370 PANTHER PTHR22976 36 360 2.4E-70 T 22-04-2016 SCD_RS04000 52a8079d6809b75a06d0b63fa2eae38f 370 Pfam PF04055 Radical SAM superfamily 56 233 6.6E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SCD_RS04000 52a8079d6809b75a06d0b63fa2eae38f 370 SMART SM00729 49 273 5.3E-19 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SCD_RS04000 52a8079d6809b75a06d0b63fa2eae38f 370 Gene3D G3DSA:3.20.20.70 45 277 2.6E-25 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS04000 52a8079d6809b75a06d0b63fa2eae38f 370 SUPERFAMILY SSF102114 46 285 1.96E-28 T 22-04-2016 SCD_RS04000 52a8079d6809b75a06d0b63fa2eae38f 370 PANTHER PTHR22976:SF7 36 360 2.4E-70 T 22-04-2016 SCD_RS01980 fe6131d1224f6dfd736afc9c61527402 450 PANTHER PTHR10314 201 448 6.0E-235 T 22-04-2016 SCD_RS01980 fe6131d1224f6dfd736afc9c61527402 450 PANTHER PTHR10314 31 184 6.0E-235 T 22-04-2016 SCD_RS01980 fe6131d1224f6dfd736afc9c61527402 450 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 21 425 38.255 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SCD_RS01980 fe6131d1224f6dfd736afc9c61527402 450 PIRSF PIRSF001413 9 431 1.3E-110 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SCD_RS01980 fe6131d1224f6dfd736afc9c61527402 450 PANTHER PTHR10314:SF21 201 448 6.0E-235 T 22-04-2016 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SCD_RS01980 fe6131d1224f6dfd736afc9c61527402 450 PANTHER PTHR10314:SF21 31 184 6.0E-235 T 22-04-2016 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SCD_RS01980 fe6131d1224f6dfd736afc9c61527402 450 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 74 412 2.6E-49 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SCD_RS01980 fe6131d1224f6dfd736afc9c61527402 450 TIGRFAM TIGR01415 trpB_rel: pyridoxal-phosphate dependent TrpB-like enzyme 13 427 1.5E-187 T 22-04-2016 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SCD_RS01980 fe6131d1224f6dfd736afc9c61527402 450 Gene3D G3DSA:3.40.50.1100 208 429 9.2E-58 T 22-04-2016 SCD_RS01980 fe6131d1224f6dfd736afc9c61527402 450 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 104 118 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SCD_RS01980 fe6131d1224f6dfd736afc9c61527402 450 Gene3D G3DSA:3.40.50.1100 126 198 6.8E-12 T 22-04-2016 SCD_RS01980 fe6131d1224f6dfd736afc9c61527402 450 SUPERFAMILY SSF53686 31 424 4.06E-112 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SCD_RS01980 fe6131d1224f6dfd736afc9c61527402 450 PIRSF PIRSF500824 1 434 9.9E-200 T 22-04-2016 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SCD_RS03160 2660ea2a672d9536203d1d6981bdc357 105 Gene3D G3DSA:2.30.30.30 3 92 1.8E-20 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 SCD_RS03160 2660ea2a672d9536203d1d6981bdc357 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 97 19.785 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03160 2660ea2a672d9536203d1d6981bdc357 105 SMART SM00739 3 30 3.1E-4 T 22-04-2016 IPR005824 KOW SCD_RS03160 2660ea2a672d9536203d1d6981bdc357 105 PANTHER PTHR12903 3 104 3.5E-41 T 22-04-2016 SCD_RS03160 2660ea2a672d9536203d1d6981bdc357 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 102 5.2E-24 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03160 2660ea2a672d9536203d1d6981bdc357 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03160 2660ea2a672d9536203d1d6981bdc357 105 SUPERFAMILY SSF50104 3 102 5.52E-31 T 22-04-2016 IPR008991 Translation protein SH3-like domain SCD_RS03160 2660ea2a672d9536203d1d6981bdc357 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 102 6.4E-38 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS11875 65cb10572321da62e15b01b447a02e8d 259 Pfam PF00005 ABC transporter 61 192 5.7E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS11875 65cb10572321da62e15b01b447a02e8d 259 SMART SM00382 70 259 1.3E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS11875 65cb10572321da62e15b01b447a02e8d 259 PANTHER PTHR24220 58 259 2.9E-108 T 22-04-2016 SCD_RS11875 65cb10572321da62e15b01b447a02e8d 259 PANTHER PTHR24220 6 18 2.9E-108 T 22-04-2016 SCD_RS11875 65cb10572321da62e15b01b447a02e8d 259 Gene3D G3DSA:3.40.50.300 4 14 1.3E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11875 65cb10572321da62e15b01b447a02e8d 259 Gene3D G3DSA:3.40.50.300 51 254 1.3E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11875 65cb10572321da62e15b01b447a02e8d 259 PANTHER PTHR24220:SF117 58 259 2.9E-108 T 22-04-2016 SCD_RS11875 65cb10572321da62e15b01b447a02e8d 259 PANTHER PTHR24220:SF117 6 18 2.9E-108 T 22-04-2016 SCD_RS11875 65cb10572321da62e15b01b447a02e8d 259 SUPERFAMILY SSF52540 55 253 2.5E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03985 bddc0527687d1e9a74cbe8004dc2f3f1 351 Gene3D G3DSA:3.20.20.70 63 319 5.7E-21 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS03985 bddc0527687d1e9a74cbe8004dc2f3f1 351 SUPERFAMILY SSF102114 60 302 2.22E-20 T 22-04-2016 SCD_RS03985 bddc0527687d1e9a74cbe8004dc2f3f1 351 PANTHER PTHR22976 60 306 1.1E-55 T 22-04-2016 SCD_RS03985 bddc0527687d1e9a74cbe8004dc2f3f1 351 Pfam PF04055 Radical SAM superfamily 66 212 1.8E-8 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SCD_RS03985 bddc0527687d1e9a74cbe8004dc2f3f1 351 PANTHER PTHR22976:SF13 60 306 1.1E-55 T 22-04-2016 SCD_RS15575 f9059f94ac2041306b5fd890295e4818 677 SUPERFAMILY SSF55785 130 237 4.03E-25 T 22-04-2016 IPR000014 PAS domain SCD_RS15575 f9059f94ac2041306b5fd890295e4818 677 SUPERFAMILY SSF55073 253 409 3.45E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS15575 f9059f94ac2041306b5fd890295e4818 677 Gene3D G3DSA:3.30.70.270 251 410 1.0E-49 T 22-04-2016 SCD_RS15575 f9059f94ac2041306b5fd890295e4818 677 Pfam PF00990 Diguanylate cyclase, GGDEF domain 249 404 4.1E-44 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15575 f9059f94ac2041306b5fd890295e4818 677 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 123 243 2.7E-21 T 22-04-2016 IPR000014 PAS domain SCD_RS15575 f9059f94ac2041306b5fd890295e4818 677 Gene3D G3DSA:3.20.20.450 425 675 1.0E-60 T 22-04-2016 IPR001633 EAL domain SCD_RS15575 f9059f94ac2041306b5fd890295e4818 677 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 246 406 2.7E-47 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15575 f9059f94ac2041306b5fd890295e4818 677 SMART SM00267 237 409 3.8E-54 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15575 f9059f94ac2041306b5fd890295e4818 677 SUPERFAMILY SSF141868 425 674 2.62E-56 T 22-04-2016 IPR001633 EAL domain SCD_RS15575 f9059f94ac2041306b5fd890295e4818 677 PANTHER PTHR33121 425 675 5.2E-48 T 22-04-2016 SCD_RS15575 f9059f94ac2041306b5fd890295e4818 677 PANTHER PTHR33121:SF10 425 675 5.2E-48 T 22-04-2016 SCD_RS15575 f9059f94ac2041306b5fd890295e4818 677 SMART SM00052 418 672 1.1E-44 T 22-04-2016 IPR001633 EAL domain SCD_RS15575 f9059f94ac2041306b5fd890295e4818 677 Pfam PF13426 PAS domain 135 236 3.2E-20 T 22-04-2016 IPR000014 PAS domain SCD_RS15575 f9059f94ac2041306b5fd890295e4818 677 Pfam PF13426 PAS domain 25 106 0.54 T 22-04-2016 IPR000014 PAS domain SCD_RS15575 f9059f94ac2041306b5fd890295e4818 677 Pfam PF00563 EAL domain 425 667 5.7E-50 T 22-04-2016 IPR001633 EAL domain SCD_RS15575 f9059f94ac2041306b5fd890295e4818 677 Gene3D G3DSA:3.30.450.20 135 237 1.5E-26 T 22-04-2016 SCD_RS15575 f9059f94ac2041306b5fd890295e4818 677 SMART SM00091 7 72 76.0 T 22-04-2016 IPR000014 PAS domain SCD_RS15575 f9059f94ac2041306b5fd890295e4818 677 SMART SM00091 123 189 2.1E-6 T 22-04-2016 IPR000014 PAS domain SCD_RS15575 f9059f94ac2041306b5fd890295e4818 677 SMART SM00086 195 237 1.7E-7 T 22-04-2016 IPR001610 PAC motif SCD_RS09425 dd0d811bfd6cfc4d4575cf3e91139af1 167 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 24 146 1.2E-38 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SCD_RS09425 dd0d811bfd6cfc4d4575cf3e91139af1 167 PANTHER PTHR33540 19 167 4.4E-41 T 22-04-2016 SCD_RS09425 dd0d811bfd6cfc4d4575cf3e91139af1 167 Gene3D G3DSA:3.40.50.300 19 166 5.2E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS09425 dd0d811bfd6cfc4d4575cf3e91139af1 167 SUPERFAMILY SSF52540 40 155 3.67E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS09425 dd0d811bfd6cfc4d4575cf3e91139af1 167 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 23 154 4.9E-44 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SCD_RS06950 a95fe378538146c49664d75906ce31d7 417 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 237 257 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 SCD_RS06950 a95fe378538146c49664d75906ce31d7 417 PANTHER PTHR32332 90 307 8.5E-45 T 22-04-2016 SCD_RS06950 a95fe378538146c49664d75906ce31d7 417 PANTHER PTHR32332 8 52 8.5E-45 T 22-04-2016 SCD_RS06950 a95fe378538146c49664d75906ce31d7 417 SUPERFAMILY SSF51412 17 69 2.2E-34 T 22-04-2016 SCD_RS06950 a95fe378538146c49664d75906ce31d7 417 SUPERFAMILY SSF51412 109 317 2.2E-34 T 22-04-2016 SCD_RS06950 a95fe378538146c49664d75906ce31d7 417 Gene3D G3DSA:3.20.20.70 17 56 1.3E-36 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS06950 a95fe378538146c49664d75906ce31d7 417 Gene3D G3DSA:3.20.20.70 94 308 1.3E-36 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS06950 a95fe378538146c49664d75906ce31d7 417 Pfam PF03060 Nitronate monooxygenase 169 307 1.5E-22 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 SCD_RS06950 a95fe378538146c49664d75906ce31d7 417 PANTHER PTHR32332:SF18 90 307 8.5E-45 T 22-04-2016 SCD_RS06950 a95fe378538146c49664d75906ce31d7 417 PANTHER PTHR32332:SF18 8 52 8.5E-45 T 22-04-2016 SCD_RS11420 8ec430b34ca7f28703026620fd123919 710 PANTHER PTHR32331 2 708 0.0 T 22-04-2016 SCD_RS11420 8ec430b34ca7f28703026620fd123919 710 SUPERFAMILY SSF102114 466 613 1.44E-11 T 22-04-2016 SCD_RS11420 8ec430b34ca7f28703026620fd123919 710 SUPERFAMILY SSF102114 370 436 1.44E-11 T 22-04-2016 SCD_RS11420 8ec430b34ca7f28703026620fd123919 710 Pfam PF08497 Radical SAM N-terminal 24 372 8.2E-143 T 22-04-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal SCD_RS11420 8ec430b34ca7f28703026620fd123919 710 Pfam PF11842 Domain of unknown function (DUF3362) 587 695 1.4E-48 T 22-04-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal SCD_RS11420 8ec430b34ca7f28703026620fd123919 710 Gene3D G3DSA:3.80.30.20 367 618 7.8E-48 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SCD_RS11420 8ec430b34ca7f28703026620fd123919 710 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 373 393 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 SCD_RS11420 8ec430b34ca7f28703026620fd123919 710 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 637 1.0E-258 T 22-04-2016 IPR022946 Uncharacterised protein family UPF0313 SCD_RS11420 8ec430b34ca7f28703026620fd123919 710 Pfam PF04055 Radical SAM superfamily 373 578 8.0E-21 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SCD_RS11420 8ec430b34ca7f28703026620fd123919 710 SMART SM00729 369 623 7.7E-12 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SCD_RS11420 8ec430b34ca7f28703026620fd123919 710 PANTHER PTHR32331:SF3 2 708 0.0 T 22-04-2016 SCD_RS11420 8ec430b34ca7f28703026620fd123919 710 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 22 708 48.171 T 22-04-2016 IPR022946 Uncharacterised protein family UPF0313 SCD_RS10090 25fbec1e514457d75adaeb6a0ea3a6f4 165 PANTHER PTHR23046 1 159 5.9E-80 T 22-04-2016 SCD_RS10090 25fbec1e514457d75adaeb6a0ea3a6f4 165 PANTHER PTHR23046:SF2 1 159 5.9E-80 T 22-04-2016 SCD_RS10090 25fbec1e514457d75adaeb6a0ea3a6f4 165 Gene3D G3DSA:3.40.50.7700 2 158 1.4E-70 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SCD_RS10090 25fbec1e514457d75adaeb6a0ea3a6f4 165 Pfam PF00731 AIR carboxylase 6 153 1.5E-61 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SCD_RS10090 25fbec1e514457d75adaeb6a0ea3a6f4 165 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 7 156 4.7E-62 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SCD_RS10090 25fbec1e514457d75adaeb6a0ea3a6f4 165 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 7 160 31.296 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SCD_RS10090 25fbec1e514457d75adaeb6a0ea3a6f4 165 PIRSF PIRSF001338 2 162 2.1E-63 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 SCD_RS10090 25fbec1e514457d75adaeb6a0ea3a6f4 165 SMART SM01001 5 156 9.2E-96 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SCD_RS10090 25fbec1e514457d75adaeb6a0ea3a6f4 165 SUPERFAMILY SSF52255 6 159 2.62E-63 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SCD_RS08275 96eaf8354721ab6c49a586304ed56bcc 446 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 429 7.4E-9 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 SCD_RS08275 96eaf8354721ab6c49a586304ed56bcc 446 PIRSF PIRSF000538 21 443 1.6E-42 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SCD_RS08275 96eaf8354721ab6c49a586304ed56bcc 446 SUPERFAMILY SSF53067 24 243 2.5E-35 T 22-04-2016 SCD_RS08275 96eaf8354721ab6c49a586304ed56bcc 446 PANTHER PTHR10196 1 431 5.8E-117 T 22-04-2016 SCD_RS08275 96eaf8354721ab6c49a586304ed56bcc 446 Gene3D G3DSA:3.30.420.40 248 432 6.0E-9 T 22-04-2016 SCD_RS08275 96eaf8354721ab6c49a586304ed56bcc 446 SUPERFAMILY SSF53067 250 432 1.81E-16 T 22-04-2016 SCD_RS08275 96eaf8354721ab6c49a586304ed56bcc 446 PANTHER PTHR10196:SF9 1 431 5.8E-117 T 22-04-2016 SCD_RS08275 96eaf8354721ab6c49a586304ed56bcc 446 Gene3D G3DSA:3.30.420.40 23 244 2.5E-27 T 22-04-2016 SCD_RS08275 96eaf8354721ab6c49a586304ed56bcc 446 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 24 244 2.5E-16 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 SCD_RS13595 b753560fe32407a599b065f54ebda24f 520 PANTHER PTHR24423 1 15 2.1E-53 T 22-04-2016 SCD_RS13595 b753560fe32407a599b065f54ebda24f 520 PANTHER PTHR24423 270 516 2.1E-53 T 22-04-2016 SCD_RS13595 b753560fe32407a599b065f54ebda24f 520 PANTHER PTHR24423 192 229 2.1E-53 T 22-04-2016 SCD_RS13595 b753560fe32407a599b065f54ebda24f 520 Pfam PF00512 His Kinase A (phospho-acceptor) domain 296 359 1.7E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS13595 b753560fe32407a599b065f54ebda24f 520 Gene3D G3DSA:1.10.287.130 293 347 1.1E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS13595 b753560fe32407a599b065f54ebda24f 520 SUPERFAMILY SSF47384 291 359 9.02E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS13595 b753560fe32407a599b065f54ebda24f 520 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 404 514 4.4E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS13595 b753560fe32407a599b065f54ebda24f 520 SMART SM00387 403 515 8.2E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS13595 b753560fe32407a599b065f54ebda24f 520 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 493 4.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS13595 b753560fe32407a599b065f54ebda24f 520 PRINTS PR00344 Bacterial sensor protein C-terminal signature 499 512 4.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS13595 b753560fe32407a599b065f54ebda24f 520 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 460 4.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS13595 b753560fe32407a599b065f54ebda24f 520 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 474 4.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS13595 b753560fe32407a599b065f54ebda24f 520 Gene3D G3DSA:3.30.565.10 348 512 5.3E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS13595 b753560fe32407a599b065f54ebda24f 520 SUPERFAMILY SSF55874 353 512 9.04E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS13595 b753560fe32407a599b065f54ebda24f 520 SMART SM00388 296 362 8.3E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS13595 b753560fe32407a599b065f54ebda24f 520 Pfam PF14827 Double sensory domain of two-component sensor kinase 6 230 3.7E-13 T 22-04-2016 IPR029150 Double Cache domain 3 SCD_RS13595 b753560fe32407a599b065f54ebda24f 520 SUPERFAMILY SSF103190 3 121 8.63E-8 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 PANTHER PTHR24422 121 863 5.7E-268 T 22-04-2016 SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 865 972 2.4E-19 T 22-04-2016 IPR000014 PAS domain SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 Pfam PF01339 CheB methylesterase 31 206 2.8E-55 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 Pfam PF00989 PAS fold 869 969 5.7E-10 T 22-04-2016 IPR013767 PAS fold GO:0006355 SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 Gene3D G3DSA:3.40.50.150 296 491 2.0E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 SUPERFAMILY SSF52738 26 213 7.32E-58 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 PRINTS PR00996 Glutamate methyltransferase family signature 330 350 8.3E-27 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 PRINTS PR00996 Glutamate methyltransferase family signature 432 446 8.3E-27 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 PRINTS PR00996 Glutamate methyltransferase family signature 290 302 8.3E-27 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 PRINTS PR00996 Glutamate methyltransferase family signature 451 474 8.3E-27 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 PRINTS PR00996 Glutamate methyltransferase family signature 366 382 8.3E-27 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 PRINTS PR00996 Glutamate methyltransferase family signature 253 266 8.3E-27 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 SUPERFAMILY SSF55785 738 847 2.3E-7 T 22-04-2016 IPR000014 PAS domain SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 Gene3D G3DSA:3.40.50.180 23 212 1.7E-64 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 Gene3D G3DSA:3.30.450.20 738 851 3.5E-7 T 22-04-2016 SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 SUPERFAMILY SSF47757 230 300 2.75E-14 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 Pfam PF13596 PAS domain 747 851 1.1E-24 T 22-04-2016 SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 SMART SM00091 745 810 22.0 T 22-04-2016 IPR000014 PAS domain SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 SMART SM00091 868 934 3.4E-8 T 22-04-2016 IPR000014 PAS domain SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 SUPERFAMILY SSF55785 859 974 1.26E-20 T 22-04-2016 IPR000014 PAS domain SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 SUPERFAMILY SSF53335 297 490 1.06E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 SMART SM00138 231 492 2.2E-76 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 Pfam PF01739 CheR methyltransferase, SAM binding domain 297 488 1.9E-51 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 Pfam PF03705 CheR methyltransferase, all-alpha domain 234 284 2.5E-15 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 PANTHER PTHR24422:SF6 121 863 5.7E-268 T 22-04-2016 SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 Gene3D G3DSA:3.30.450.20 861 974 1.2E-21 T 22-04-2016 SCD_RS04650 5d42bf4a0d84ac593cacd012bb79096a 979 Gene3D G3DSA:1.10.155.10 233 294 3.4E-14 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SCD_RS09350 114c1e1410af50d107b7c2c332e8c243 217 Hamap MF_00235 Adenylate kinase [adk]. 1 217 53.272 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SCD_RS09350 114c1e1410af50d107b7c2c332e8c243 217 TIGRFAM TIGR01351 adk: adenylate kinase 2 187 2.4E-72 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SCD_RS09350 114c1e1410af50d107b7c2c332e8c243 217 Pfam PF00406 Adenylate kinase 5 185 6.2E-57 T 22-04-2016 SCD_RS09350 114c1e1410af50d107b7c2c332e8c243 217 PRINTS PR00094 Adenylate kinase signature 156 171 4.1E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SCD_RS09350 114c1e1410af50d107b7c2c332e8c243 217 PRINTS PR00094 Adenylate kinase signature 4 17 4.1E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SCD_RS09350 114c1e1410af50d107b7c2c332e8c243 217 PRINTS PR00094 Adenylate kinase signature 173 187 4.1E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SCD_RS09350 114c1e1410af50d107b7c2c332e8c243 217 PRINTS PR00094 Adenylate kinase signature 32 46 4.1E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SCD_RS09350 114c1e1410af50d107b7c2c332e8c243 217 PRINTS PR00094 Adenylate kinase signature 81 97 4.1E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SCD_RS09350 114c1e1410af50d107b7c2c332e8c243 217 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SCD_RS09350 114c1e1410af50d107b7c2c332e8c243 217 Pfam PF05191 Adenylate kinase, active site lid 123 158 5.2E-15 T 22-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SCD_RS09350 114c1e1410af50d107b7c2c332e8c243 217 Gene3D G3DSA:3.40.50.300 1 215 5.1E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS09350 114c1e1410af50d107b7c2c332e8c243 217 SUPERFAMILY SSF52540 1 184 1.96E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS09350 114c1e1410af50d107b7c2c332e8c243 217 PANTHER PTHR23359 1 216 2.0E-107 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SCD_RS01435 8e0172c294d49988e684b2b74d11b705 101 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 6 83 3.4E-33 T 22-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 SCD_RS01435 8e0172c294d49988e684b2b74d11b705 101 Pfam PF01381 Helix-turn-helix 16 67 2.8E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SCD_RS01435 8e0172c294d49988e684b2b74d11b705 101 SUPERFAMILY SSF47413 9 91 1.45E-27 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SCD_RS01435 8e0172c294d49988e684b2b74d11b705 101 PANTHER PTHR36924:SF1 1 97 3.2E-35 T 22-04-2016 SCD_RS01435 8e0172c294d49988e684b2b74d11b705 101 PANTHER PTHR36924 1 97 3.2E-35 T 22-04-2016 SCD_RS01435 8e0172c294d49988e684b2b74d11b705 101 Gene3D G3DSA:1.10.260.40 3 92 5.2E-33 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SCD_RS01435 8e0172c294d49988e684b2b74d11b705 101 SMART SM00530 14 69 3.1E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SCD_RS01135 f9857491fd981325fb98f9f584e4f18c 384 SUPERFAMILY SSF52540 5 335 2.24E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS01135 f9857491fd981325fb98f9f584e4f18c 384 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 5.0E-127 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 SCD_RS01135 f9857491fd981325fb98f9f584e4f18c 384 Gene3D G3DSA:3.40.50.300 102 341 2.2E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS01135 f9857491fd981325fb98f9f584e4f18c 384 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SCD_RS01135 f9857491fd981325fb98f9f584e4f18c 384 Pfam PF00437 Type II/IV secretion system protein 113 270 1.8E-31 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SCD_RS01135 f9857491fd981325fb98f9f584e4f18c 384 PANTHER PTHR30486 1 374 1.2E-134 T 22-04-2016 SCD_RS01135 f9857491fd981325fb98f9f584e4f18c 384 PANTHER PTHR30486:SF3 1 374 1.2E-134 T 22-04-2016 SCD_RS12975 e14555b3dc030ecbece1720ee79cd8d3 276 SUPERFAMILY SSF55060 158 274 3.6E-36 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SCD_RS12975 e14555b3dc030ecbece1720ee79cd8d3 276 Gene3D G3DSA:3.30.70.890 158 275 9.2E-44 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SCD_RS12975 e14555b3dc030ecbece1720ee79cd8d3 276 Gene3D G3DSA:3.30.230.10 3 156 2.3E-54 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SCD_RS12975 e14555b3dc030ecbece1720ee79cd8d3 276 PANTHER PTHR20861 1 272 1.4E-83 T 22-04-2016 SCD_RS12975 e14555b3dc030ecbece1720ee79cd8d3 276 Pfam PF00288 GHMP kinases N terminal domain 84 142 8.5E-11 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SCD_RS12975 e14555b3dc030ecbece1720ee79cd8d3 276 PANTHER PTHR20861:SF2 1 272 1.4E-83 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SCD_RS12975 e14555b3dc030ecbece1720ee79cd8d3 276 Pfam PF08544 GHMP kinases C terminal 205 250 3.0E-8 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SCD_RS12975 e14555b3dc030ecbece1720ee79cd8d3 276 SUPERFAMILY SSF54211 1 155 1.75E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SCD_RS12975 e14555b3dc030ecbece1720ee79cd8d3 276 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 272 5.8E-84 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SCD_RS12975 e14555b3dc030ecbece1720ee79cd8d3 276 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 2 268 34.066 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SCD_RS12975 e14555b3dc030ecbece1720ee79cd8d3 276 PIRSF PIRSF010376 1 275 7.1E-86 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SCD_RS02920 3dc441db564a6e4775600ba6e658fe62 195 SUPERFAMILY SSF54211 1 86 8.6E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SCD_RS02920 3dc441db564a6e4775600ba6e658fe62 195 PANTHER PTHR23133 1 195 4.3E-104 T 22-04-2016 SCD_RS02920 3dc441db564a6e4775600ba6e658fe62 195 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SCD_RS02920 3dc441db564a6e4775600ba6e658fe62 195 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 195 42.903 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SCD_RS02920 3dc441db564a6e4775600ba6e658fe62 195 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 174 3.6E-65 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SCD_RS02920 3dc441db564a6e4775600ba6e658fe62 195 SUPERFAMILY SSF54211 88 178 1.9E-36 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SCD_RS02920 3dc441db564a6e4775600ba6e658fe62 195 Gene3D G3DSA:3.30.230.40 90 195 5.2E-32 T 22-04-2016 SCD_RS02920 3dc441db564a6e4775600ba6e658fe62 195 Gene3D G3DSA:3.30.230.40 1 88 8.3E-38 T 22-04-2016 SCD_RS02920 3dc441db564a6e4775600ba6e658fe62 195 PANTHER PTHR23133:SF2 1 195 4.3E-104 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SCD_RS02920 3dc441db564a6e4775600ba6e658fe62 195 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SCD_RS01650 3e73c4c331e88e849f15c4c55a73d3af 213 PIRSF PIRSF000005 1 211 2.2E-56 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 SCD_RS01650 3e73c4c331e88e849f15c4c55a73d3af 213 Gene3D G3DSA:1.10.760.10 127 207 7.7E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01650 3e73c4c331e88e849f15c4c55a73d3af 213 Gene3D G3DSA:1.10.760.10 39 112 3.0E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01650 3e73c4c331e88e849f15c4c55a73d3af 213 PANTHER PTHR33751 38 212 6.6E-45 T 22-04-2016 SCD_RS01650 3e73c4c331e88e849f15c4c55a73d3af 213 SUPERFAMILY SSF46626 121 207 1.14E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01650 3e73c4c331e88e849f15c4c55a73d3af 213 SUPERFAMILY SSF46626 41 114 1.92E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01650 3e73c4c331e88e849f15c4c55a73d3af 213 PANTHER PTHR33751:SF3 38 212 6.6E-45 T 22-04-2016 SCD_RS01650 3e73c4c331e88e849f15c4c55a73d3af 213 Pfam PF00034 Cytochrome c 42 110 9.2E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01650 3e73c4c331e88e849f15c4c55a73d3af 213 Pfam PF00034 Cytochrome c 126 207 1.6E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS04375 9018e9f99858b844b4a13058e330f46c 210 PANTHER PTHR22854:SF6 1 202 1.4E-69 T 22-04-2016 SCD_RS04375 9018e9f99858b844b4a13058e330f46c 210 SUPERFAMILY SSF51366 2 201 1.02E-62 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SCD_RS04375 9018e9f99858b844b4a13058e330f46c 210 Gene3D G3DSA:3.20.20.70 1 203 3.7E-74 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS04375 9018e9f99858b844b4a13058e330f46c 210 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 4 199 2.4E-51 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 SCD_RS04375 9018e9f99858b844b4a13058e330f46c 210 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 2 204 42.951 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 SCD_RS04375 9018e9f99858b844b4a13058e330f46c 210 PANTHER PTHR22854 1 202 1.4E-69 T 22-04-2016 SCD_RS03165 b0d3d82db8db1a66711878a56a13d7e0 179 Pfam PF00281 Ribosomal protein L5 24 80 1.8E-26 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal SCD_RS03165 b0d3d82db8db1a66711878a56a13d7e0 179 PANTHER PTHR11994 1 178 6.4E-89 T 22-04-2016 SCD_RS03165 b0d3d82db8db1a66711878a56a13d7e0 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 22-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03165 b0d3d82db8db1a66711878a56a13d7e0 179 Gene3D G3DSA:3.30.1440.10 1 179 1.9E-77 T 22-04-2016 IPR022803 Ribosomal protein L5 domain SCD_RS03165 b0d3d82db8db1a66711878a56a13d7e0 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 6.6E-41 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal SCD_RS03165 b0d3d82db8db1a66711878a56a13d7e0 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 43.169 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03165 b0d3d82db8db1a66711878a56a13d7e0 179 PIRSF PIRSF002161 1 179 1.3E-65 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 SCD_RS03165 b0d3d82db8db1a66711878a56a13d7e0 179 SUPERFAMILY SSF55282 3 179 1.67E-77 T 22-04-2016 IPR022803 Ribosomal protein L5 domain SCD_RS01360 fb22f0754dcff641f31202bfd2ed75d9 268 Gene3D G3DSA:2.30.30.60 120 166 2.0E-15 T 22-04-2016 SCD_RS01360 fb22f0754dcff641f31202bfd2ed75d9 268 Pfam PF00924 Mechanosensitive ion channel 65 263 5.0E-32 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SCD_RS01360 fb22f0754dcff641f31202bfd2ed75d9 268 SUPERFAMILY SSF50182 104 166 2.48E-16 T 22-04-2016 IPR010920 LSM domain SCD_RS01360 fb22f0754dcff641f31202bfd2ed75d9 268 PANTHER PTHR30566 21 265 2.8E-45 T 22-04-2016 SCD_RS01360 fb22f0754dcff641f31202bfd2ed75d9 268 PANTHER PTHR30566:SF11 21 265 2.8E-45 T 22-04-2016 SCD_RS03335 f5a5510f4548444e82421ecb38cc4505 195 Gene3D G3DSA:1.10.8.10 150 192 1.7E-9 T 22-04-2016 SCD_RS03335 f5a5510f4548444e82421ecb38cc4505 195 Pfam PF14520 Helix-hairpin-helix domain 72 130 4.2E-20 T 22-04-2016 SCD_RS03335 f5a5510f4548444e82421ecb38cc4505 195 SUPERFAMILY SSF46929 150 194 3.01E-10 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 SCD_RS03335 f5a5510f4548444e82421ecb38cc4505 195 Gene3D G3DSA:1.10.150.20 67 134 3.3E-29 T 22-04-2016 SCD_RS03335 f5a5510f4548444e82421ecb38cc4505 195 Gene3D G3DSA:2.40.50.140 1 65 3.7E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS03335 f5a5510f4548444e82421ecb38cc4505 195 PANTHER PTHR33796 2 195 1.7E-78 T 22-04-2016 SCD_RS03335 f5a5510f4548444e82421ecb38cc4505 195 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 193 31.524 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SCD_RS03335 f5a5510f4548444e82421ecb38cc4505 195 SUPERFAMILY SSF50249 1 63 8.57E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS03335 f5a5510f4548444e82421ecb38cc4505 195 Pfam PF01330 RuvA N terminal domain 1 62 5.0E-21 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 SCD_RS03335 f5a5510f4548444e82421ecb38cc4505 195 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 191 1.6E-55 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SCD_RS03335 f5a5510f4548444e82421ecb38cc4505 195 SMART SM00278 108 127 0.0012 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SCD_RS03335 f5a5510f4548444e82421ecb38cc4505 195 SMART SM00278 73 92 0.3 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SCD_RS03335 f5a5510f4548444e82421ecb38cc4505 195 Pfam PF07499 RuvA, C-terminal domain 150 193 8.2E-15 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 SCD_RS03335 f5a5510f4548444e82421ecb38cc4505 195 SUPERFAMILY SSF47781 66 135 3.06E-21 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SCD_RS09565 55b8e19909b040b5c8ff4fe9907b240c 468 Gene3D G3DSA:2.40.160.10 97 430 7.4E-13 T 22-04-2016 IPR023614 Porin domain SCD_RS09565 55b8e19909b040b5c8ff4fe9907b240c 468 SUPERFAMILY SSF56935 40 59 2.93E-11 T 22-04-2016 SCD_RS09565 55b8e19909b040b5c8ff4fe9907b240c 468 SUPERFAMILY SSF56935 103 194 2.93E-11 T 22-04-2016 SCD_RS09565 55b8e19909b040b5c8ff4fe9907b240c 468 SUPERFAMILY SSF56935 226 441 2.93E-11 T 22-04-2016 SCD_RS09565 55b8e19909b040b5c8ff4fe9907b240c 468 Pfam PF07396 Phosphate-selective porin O and P 365 437 9.7E-7 T 22-04-2016 IPR010870 Phosphate-selective porin O/P SCD_RS07245 a05bdf82b7b4176dbdcb2a75c73299e8 495 Pfam PF01256 Carbohydrate kinase 240 478 8.4E-56 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SCD_RS07245 a05bdf82b7b4176dbdcb2a75c73299e8 495 PANTHER PTHR12592:SF0 1 495 7.0E-112 T 22-04-2016 SCD_RS07245 a05bdf82b7b4176dbdcb2a75c73299e8 495 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 7 204 22.095 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SCD_RS07245 a05bdf82b7b4176dbdcb2a75c73299e8 495 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 217 487 22.227 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SCD_RS07245 a05bdf82b7b4176dbdcb2a75c73299e8 495 SUPERFAMILY SSF53613 216 488 2.81E-67 T 22-04-2016 IPR029056 Ribokinase-like SCD_RS07245 a05bdf82b7b4176dbdcb2a75c73299e8 495 Pfam PF03853 YjeF-related protein N-terminus 25 183 1.4E-45 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SCD_RS07245 a05bdf82b7b4176dbdcb2a75c73299e8 495 PANTHER PTHR12592 1 495 7.0E-112 T 22-04-2016 SCD_RS07245 a05bdf82b7b4176dbdcb2a75c73299e8 495 Gene3D G3DSA:3.40.1190.20 224 488 3.3E-81 T 22-04-2016 IPR029056 Ribokinase-like SCD_RS07245 a05bdf82b7b4176dbdcb2a75c73299e8 495 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 219 481 3.4E-61 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SCD_RS07245 a05bdf82b7b4176dbdcb2a75c73299e8 495 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 16 203 2.4E-41 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SCD_RS07245 a05bdf82b7b4176dbdcb2a75c73299e8 495 Gene3D G3DSA:3.40.50.10260 4 223 3.8E-67 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SCD_RS07245 a05bdf82b7b4176dbdcb2a75c73299e8 495 SUPERFAMILY SSF64153 4 238 4.84E-61 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SCD_RS07245 a05bdf82b7b4176dbdcb2a75c73299e8 495 PIRSF PIRSF017184 3 492 3.2E-124 T 22-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 SCD_RS07245 a05bdf82b7b4176dbdcb2a75c73299e8 495 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 425 435 - T 22-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site SCD_RS13445 f95e8066a851285d68eb0e69f93251cb 432 TIGRFAM TIGR02064 dsrA: sulfite reductase, dissimilatory-type alpha subunit 11 427 1.1E-150 T 22-04-2016 IPR011806 Sulphite reductase, dissimilatory-type alpha subunit GO:0018551|GO:0020037|GO:0051539|GO:0055114 SCD_RS13445 f95e8066a851285d68eb0e69f93251cb 432 Gene3D G3DSA:3.30.413.10 160 234 1.0E-28 T 22-04-2016 SCD_RS13445 f95e8066a851285d68eb0e69f93251cb 432 Gene3D G3DSA:3.30.413.10 321 392 1.0E-28 T 22-04-2016 SCD_RS13445 f95e8066a851285d68eb0e69f93251cb 432 PANTHER PTHR11493 315 411 5.1E-49 T 22-04-2016 SCD_RS13445 f95e8066a851285d68eb0e69f93251cb 432 PANTHER PTHR11493 68 231 5.1E-49 T 22-04-2016 SCD_RS13445 f95e8066a851285d68eb0e69f93251cb 432 SUPERFAMILY SSF56014 320 418 1.74E-46 T 22-04-2016 SCD_RS13445 f95e8066a851285d68eb0e69f93251cb 432 SUPERFAMILY SSF56014 160 234 1.74E-46 T 22-04-2016 SCD_RS13445 f95e8066a851285d68eb0e69f93251cb 432 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 160 396 1.1E-31 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SCD_RS13445 f95e8066a851285d68eb0e69f93251cb 432 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 151 6.1E-9 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SCD_RS13445 f95e8066a851285d68eb0e69f93251cb 432 PANTHER PTHR11493:SF50 315 411 5.1E-49 T 22-04-2016 SCD_RS13445 f95e8066a851285d68eb0e69f93251cb 432 PANTHER PTHR11493:SF50 68 231 5.1E-49 T 22-04-2016 SCD_RS13445 f95e8066a851285d68eb0e69f93251cb 432 SUPERFAMILY SSF54862 220 312 1.47E-10 T 22-04-2016 SCD_RS13445 f95e8066a851285d68eb0e69f93251cb 432 SUPERFAMILY SSF55124 5 159 4.51E-60 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SCD_RS14070 9e3c20f82376f38934e9578876ff3800 332 SMART SM00846 3 151 3.3E-97 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SCD_RS14070 9e3c20f82376f38934e9578876ff3800 332 SUPERFAMILY SSF55347 150 313 4.76E-75 T 22-04-2016 SCD_RS14070 9e3c20f82376f38934e9578876ff3800 332 Gene3D G3DSA:3.30.360.10 160 315 1.1E-81 T 22-04-2016 SCD_RS14070 9e3c20f82376f38934e9578876ff3800 332 Gene3D G3DSA:3.40.50.720 3 159 7.8E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS14070 9e3c20f82376f38934e9578876ff3800 332 SUPERFAMILY SSF51735 3 167 3.45E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS14070 9e3c20f82376f38934e9578876ff3800 332 PIRSF PIRSF000149 1 332 2.0E-131 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SCD_RS14070 9e3c20f82376f38934e9578876ff3800 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 2.0E-44 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SCD_RS14070 9e3c20f82376f38934e9578876ff3800 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 2.0E-44 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SCD_RS14070 9e3c20f82376f38934e9578876ff3800 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 2.0E-44 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SCD_RS14070 9e3c20f82376f38934e9578876ff3800 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 2.0E-44 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SCD_RS14070 9e3c20f82376f38934e9578876ff3800 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 2.0E-44 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SCD_RS14070 9e3c20f82376f38934e9578876ff3800 332 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 156 313 3.7E-67 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 SCD_RS14070 9e3c20f82376f38934e9578876ff3800 332 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 3.4E-133 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14070 9e3c20f82376f38934e9578876ff3800 332 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 151 1.1E-60 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SCD_RS14070 9e3c20f82376f38934e9578876ff3800 332 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 149 156 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 SCD_RS14070 9e3c20f82376f38934e9578876ff3800 332 PANTHER PTHR10836 1 332 1.0E-219 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SCD_RS07610 3b20ed8d512c2082ab4c1195a96e6145 59 Pfam PF01783 Ribosomal L32p protein family 2 54 1.4E-18 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SCD_RS07610 3b20ed8d512c2082ab4c1195a96e6145 59 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.867 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SCD_RS07610 3b20ed8d512c2082ab4c1195a96e6145 59 SUPERFAMILY SSF57829 2 54 5.68E-17 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SCD_RS07610 3b20ed8d512c2082ab4c1195a96e6145 59 PANTHER PTHR35534 1 57 5.0E-23 T 22-04-2016 SCD_RS07610 3b20ed8d512c2082ab4c1195a96e6145 59 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 53 3.2E-19 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SCD_RS14745 a9307ec18b2a6ac745fe3439fa817ae8 376 PANTHER PTHR18964:SF2 1 375 9.6E-156 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 SCD_RS14745 a9307ec18b2a6ac745fe3439fa817ae8 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 31 367 1.3E-107 T 22-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain SCD_RS14745 a9307ec18b2a6ac745fe3439fa817ae8 376 Gene3D G3DSA:3.40.50.2000 204 369 3.2E-58 T 22-04-2016 SCD_RS14745 a9307ec18b2a6ac745fe3439fa817ae8 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 2 368 2.1E-134 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 SCD_RS14745 a9307ec18b2a6ac745fe3439fa817ae8 376 Gene3D G3DSA:3.40.50.2000 1 203 1.4E-75 T 22-04-2016 SCD_RS14745 a9307ec18b2a6ac745fe3439fa817ae8 376 PANTHER PTHR18964 1 375 9.6E-156 T 22-04-2016 SCD_RS14745 a9307ec18b2a6ac745fe3439fa817ae8 376 SUPERFAMILY SSF53756 1 369 1.15E-119 T 22-04-2016 SCD_RS04845 9583dcf81f8cb541f38827cafd90194b 265 PANTHER PTHR39167 130 262 2.4E-19 T 22-04-2016 SCD_RS04845 9583dcf81f8cb541f38827cafd90194b 265 SUPERFAMILY SSF48371 64 262 2.5E-29 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 SCD_RS04845 9583dcf81f8cb541f38827cafd90194b 265 Gene3D G3DSA:1.25.10.10 86 224 1.0E-7 T 22-04-2016 IPR011989 Armadillo-like helical SCD_RS02605 85a00be57f2deed94690b45f8e89a8c6 209 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 55 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SCD_RS02605 85a00be57f2deed94690b45f8e89a8c6 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 58 5.9E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SCD_RS02605 85a00be57f2deed94690b45f8e89a8c6 209 PANTHER PTHR30328 4 190 4.8E-24 T 22-04-2016 SCD_RS02605 85a00be57f2deed94690b45f8e89a8c6 209 Pfam PF16925 Bacterial transcriptional repressor C-terminal 82 189 1.9E-16 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SCD_RS02605 85a00be57f2deed94690b45f8e89a8c6 209 SUPERFAMILY SSF46689 5 69 4.36E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS02605 85a00be57f2deed94690b45f8e89a8c6 209 Gene3D G3DSA:1.10.357.10 4 186 6.5E-37 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SCD_RS02605 85a00be57f2deed94690b45f8e89a8c6 209 PANTHER PTHR30328:SF7 4 190 4.8E-24 T 22-04-2016 SCD_RS02605 85a00be57f2deed94690b45f8e89a8c6 209 SUPERFAMILY SSF48498 81 193 2.64E-19 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SCD_RS05410 b0aafd210b21ff23216d95b281205dfc 410 Pfam PF00817 impB/mucB/samB family 13 159 8.6E-45 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS05410 b0aafd210b21ff23216d95b281205dfc 410 PANTHER PTHR11076 10 361 3.0E-79 T 22-04-2016 SCD_RS05410 b0aafd210b21ff23216d95b281205dfc 410 Pfam PF11799 impB/mucB/samB family C-terminal domain 243 347 9.9E-7 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS05410 b0aafd210b21ff23216d95b281205dfc 410 Gene3D G3DSA:3.30.70.270 71 169 7.1E-26 T 22-04-2016 SCD_RS05410 b0aafd210b21ff23216d95b281205dfc 410 Gene3D G3DSA:3.30.1490.100 247 347 7.5E-7 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS05410 b0aafd210b21ff23216d95b281205dfc 410 Gene3D G3DSA:1.10.150.20 172 234 1.3E-9 T 22-04-2016 SCD_RS05410 b0aafd210b21ff23216d95b281205dfc 410 SUPERFAMILY SSF56672 10 237 2.49E-68 T 22-04-2016 SCD_RS05410 b0aafd210b21ff23216d95b281205dfc 410 SUPERFAMILY SSF100879 245 341 4.51E-8 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS02465 e04558c36386b88471a83f98f8c9dabd 468 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 290 312 2.0E-19 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SCD_RS02465 e04558c36386b88471a83f98f8c9dabd 468 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 61 80 2.0E-19 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SCD_RS02465 e04558c36386b88471a83f98f8c9dabd 468 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 347 361 2.0E-19 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SCD_RS02465 e04558c36386b88471a83f98f8c9dabd 468 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 424 437 2.0E-19 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SCD_RS02465 e04558c36386b88471a83f98f8c9dabd 468 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 362 376 2.0E-19 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SCD_RS02465 e04558c36386b88471a83f98f8c9dabd 468 PANTHER PTHR30023:SF0 1 465 3.0E-75 T 22-04-2016 SCD_RS02465 e04558c36386b88471a83f98f8c9dabd 468 SUPERFAMILY SSF56601 19 466 1.11E-90 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS02465 e04558c36386b88471a83f98f8c9dabd 468 Gene3D G3DSA:3.40.710.10 37 79 3.6E-5 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS02465 e04558c36386b88471a83f98f8c9dabd 468 Gene3D G3DSA:3.40.710.10 233 466 4.0E-67 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS02465 e04558c36386b88471a83f98f8c9dabd 468 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 23 463 2.6E-93 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SCD_RS02465 e04558c36386b88471a83f98f8c9dabd 468 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 50 446 7.9E-66 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SCD_RS02465 e04558c36386b88471a83f98f8c9dabd 468 PANTHER PTHR30023 1 465 3.0E-75 T 22-04-2016 SCD_RS00425 8ff2d0f8540d847240bed7c745ff6f67 380 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 6 373 48.207 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 SCD_RS00425 8ff2d0f8540d847240bed7c745ff6f67 380 PIRSF PIRSF000443 1 376 1.4E-131 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 SCD_RS00425 8ff2d0f8540d847240bed7c745ff6f67 380 PANTHER PTHR32268 3 373 1.1E-168 T 22-04-2016 SCD_RS00425 8ff2d0f8540d847240bed7c745ff6f67 380 Pfam PF00561 alpha/beta hydrolase fold 49 357 1.9E-31 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SCD_RS00425 8ff2d0f8540d847240bed7c745ff6f67 380 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 20 371 6.4E-136 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 SCD_RS00425 8ff2d0f8540d847240bed7c745ff6f67 380 Gene3D G3DSA:3.40.50.1820 238 358 3.0E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SCD_RS00425 8ff2d0f8540d847240bed7c745ff6f67 380 Gene3D G3DSA:3.40.50.1820 28 206 3.0E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SCD_RS00425 8ff2d0f8540d847240bed7c745ff6f67 380 SUPERFAMILY SSF53474 11 372 3.34E-99 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SCD_RS00425 8ff2d0f8540d847240bed7c745ff6f67 380 PANTHER PTHR32268:SF11 3 373 1.1E-168 T 22-04-2016 SCD_RS11325 9f0fa283878ba5314bb36509abe78c94 206 PANTHER PTHR26402:SF613 5 198 1.2E-68 T 22-04-2016 SCD_RS11325 9f0fa283878ba5314bb36509abe78c94 206 SMART SM00421 140 197 6.4E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS11325 9f0fa283878ba5314bb36509abe78c94 206 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS11325 9f0fa283878ba5314bb36509abe78c94 206 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 197 3.2E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS11325 9f0fa283878ba5314bb36509abe78c94 206 SUPERFAMILY SSF52172 5 153 1.32E-34 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS11325 9f0fa283878ba5314bb36509abe78c94 206 PANTHER PTHR26402 5 198 1.2E-68 T 22-04-2016 SCD_RS11325 9f0fa283878ba5314bb36509abe78c94 206 Gene3D G3DSA:1.10.10.10 143 198 1.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS11325 9f0fa283878ba5314bb36509abe78c94 206 SUPERFAMILY SSF46894 131 199 3.74E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SCD_RS11325 9f0fa283878ba5314bb36509abe78c94 206 SMART SM00448 5 116 5.6E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS11325 9f0fa283878ba5314bb36509abe78c94 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 2.0E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS11325 9f0fa283878ba5314bb36509abe78c94 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 2.0E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS11325 9f0fa283878ba5314bb36509abe78c94 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 2.0E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS11325 9f0fa283878ba5314bb36509abe78c94 206 Pfam PF00072 Response regulator receiver domain 7 116 6.2E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS11325 9f0fa283878ba5314bb36509abe78c94 206 Gene3D G3DSA:3.40.50.2300 5 142 1.1E-36 T 22-04-2016 SCD_RS13345 b8957f903a7c3b13f73e466ffb51666f 512 PANTHER PTHR31637:SF0 5 512 8.4E-273 T 22-04-2016 SCD_RS13345 b8957f903a7c3b13f73e466ffb51666f 512 PANTHER PTHR31637 5 512 8.4E-273 T 22-04-2016 SCD_RS13345 b8957f903a7c3b13f73e466ffb51666f 512 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 4 510 49.947 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SCD_RS13345 b8957f903a7c3b13f73e466ffb51666f 512 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 82 299 4.1E-83 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SCD_RS13345 b8957f903a7c3b13f73e466ffb51666f 512 SUPERFAMILY SSF53649 5 77 9.81E-73 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SCD_RS13345 b8957f903a7c3b13f73e466ffb51666f 512 SUPERFAMILY SSF53649 310 509 9.81E-73 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SCD_RS13345 b8957f903a7c3b13f73e466ffb51666f 512 Gene3D G3DSA:3.40.720.10 314 510 1.8E-85 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SCD_RS13345 b8957f903a7c3b13f73e466ffb51666f 512 Gene3D G3DSA:3.40.720.10 5 77 1.8E-85 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SCD_RS13345 b8957f903a7c3b13f73e466ffb51666f 512 Pfam PF01676 Metalloenzyme superfamily 5 498 1.1E-74 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 SCD_RS13345 b8957f903a7c3b13f73e466ffb51666f 512 SUPERFAMILY SSF64158 77 309 3.66E-84 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SCD_RS13345 b8957f903a7c3b13f73e466ffb51666f 512 PIRSF PIRSF001492 1 512 2.5E-208 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SCD_RS13345 b8957f903a7c3b13f73e466ffb51666f 512 Gene3D G3DSA:3.40.1450.10 78 310 1.6E-97 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SCD_RS13345 b8957f903a7c3b13f73e466ffb51666f 512 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 509 3.7E-222 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SCD_RS05050 fbaafcaea7ab3b440006b642954674d1 731 Gene3D G3DSA:3.30.365.10 554 728 6.4E-43 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SCD_RS05050 fbaafcaea7ab3b440006b642954674d1 731 PANTHER PTHR11908:SF79 121 719 1.1E-272 T 22-04-2016 SCD_RS05050 fbaafcaea7ab3b440006b642954674d1 731 SUPERFAMILY SSF56003 31 245 2.2E-45 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SCD_RS05050 fbaafcaea7ab3b440006b642954674d1 731 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 314 556 2.9E-32 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SCD_RS05050 fbaafcaea7ab3b440006b642954674d1 731 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 594 678 9.1E-13 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SCD_RS05050 fbaafcaea7ab3b440006b642954674d1 731 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 38 196 4.0E-16 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SCD_RS05050 fbaafcaea7ab3b440006b642954674d1 731 SUPERFAMILY SSF56003 314 724 7.07E-124 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SCD_RS05050 fbaafcaea7ab3b440006b642954674d1 731 PIRSF PIRSF036389 1 731 7.0E-272 T 22-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related SCD_RS05050 fbaafcaea7ab3b440006b642954674d1 731 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 8 26 7.2E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SCD_RS05050 fbaafcaea7ab3b440006b642954674d1 731 Gene3D G3DSA:3.30.365.10 48 180 4.0E-40 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SCD_RS05050 fbaafcaea7ab3b440006b642954674d1 731 PANTHER PTHR11908 121 719 1.1E-272 T 22-04-2016 SCD_RS05050 fbaafcaea7ab3b440006b642954674d1 731 Gene3D G3DSA:3.30.365.10 387 553 1.1E-34 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SCD_RS05050 fbaafcaea7ab3b440006b642954674d1 731 Gene3D G3DSA:3.90.1170.50 182 262 1.4E-18 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead SCD_RS05050 fbaafcaea7ab3b440006b642954674d1 731 SMART SM01008 213 291 1.8E-20 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead SCD_RS02945 56c5755503aa4fbf9a016a7853584737 106 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 6 91 5.5E-20 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SCD_RS02945 56c5755503aa4fbf9a016a7853584737 106 PANTHER PTHR21256 3 106 1.5E-46 T 22-04-2016 SCD_RS02945 56c5755503aa4fbf9a016a7853584737 106 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 88 7.4E-35 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SCD_RS02945 56c5755503aa4fbf9a016a7853584737 106 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 2 88 22.276 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SCD_RS02945 56c5755503aa4fbf9a016a7853584737 106 SUPERFAMILY SSF101386 4 93 5.61E-28 T 22-04-2016 SCD_RS06520 2744119decb26ff63ae3b3148dcaf7ab 667 Pfam PF03958 Bacterial type II/III secretion system short domain 173 250 4.2E-14 T 22-04-2016 IPR005644 NolW-like SCD_RS06520 2744119decb26ff63ae3b3148dcaf7ab 667 Pfam PF03958 Bacterial type II/III secretion system short domain 109 169 1.6E-14 T 22-04-2016 IPR005644 NolW-like SCD_RS06520 2744119decb26ff63ae3b3148dcaf7ab 667 Pfam PF03958 Bacterial type II/III secretion system short domain 256 341 4.9E-18 T 22-04-2016 IPR005644 NolW-like SCD_RS06520 2744119decb26ff63ae3b3148dcaf7ab 667 Pfam PF00263 Bacterial type II and III secretion system protein 427 595 1.8E-50 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 SCD_RS06520 2744119decb26ff63ae3b3148dcaf7ab 667 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 13 605 3.0E-188 T 22-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 SCD_RS06520 2744119decb26ff63ae3b3148dcaf7ab 667 PRINTS PR00811 Bacterial general secretion pathway protein D signature 560 578 1.8E-30 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS06520 2744119decb26ff63ae3b3148dcaf7ab 667 PRINTS PR00811 Bacterial general secretion pathway protein D signature 458 468 1.8E-30 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS06520 2744119decb26ff63ae3b3148dcaf7ab 667 PRINTS PR00811 Bacterial general secretion pathway protein D signature 583 597 1.8E-30 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS06520 2744119decb26ff63ae3b3148dcaf7ab 667 PRINTS PR00811 Bacterial general secretion pathway protein D signature 423 447 1.8E-30 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS06520 2744119decb26ff63ae3b3148dcaf7ab 667 PRINTS PR00811 Bacterial general secretion pathway protein D signature 341 351 1.8E-30 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS06520 2744119decb26ff63ae3b3148dcaf7ab 667 PANTHER PTHR30332 1 639 3.2E-161 T 22-04-2016 SCD_RS06520 2744119decb26ff63ae3b3148dcaf7ab 667 PANTHER PTHR30332:SF8 1 639 3.2E-161 T 22-04-2016 SCD_RS08445 73435b4ff654d1b3415eb43e33dd4661 605 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 445 604 7.4E-48 T 22-04-2016 IPR000160 GGDEF domain SCD_RS08445 73435b4ff654d1b3415eb43e33dd4661 605 Pfam PF00990 Diguanylate cyclase, GGDEF domain 445 600 1.0E-42 T 22-04-2016 IPR000160 GGDEF domain SCD_RS08445 73435b4ff654d1b3415eb43e33dd4661 605 PANTHER PTHR10799:SF750 166 265 1.6E-23 T 22-04-2016 SCD_RS08445 73435b4ff654d1b3415eb43e33dd4661 605 PANTHER PTHR10799:SF750 477 602 1.6E-23 T 22-04-2016 SCD_RS08445 73435b4ff654d1b3415eb43e33dd4661 605 PANTHER PTHR10799 166 265 1.6E-23 T 22-04-2016 SCD_RS08445 73435b4ff654d1b3415eb43e33dd4661 605 PANTHER PTHR10799 477 602 1.6E-23 T 22-04-2016 SCD_RS08445 73435b4ff654d1b3415eb43e33dd4661 605 Gene3D G3DSA:3.30.70.270 447 602 2.6E-50 T 22-04-2016 SCD_RS08445 73435b4ff654d1b3415eb43e33dd4661 605 SMART SM00267 433 604 2.3E-56 T 22-04-2016 IPR000160 GGDEF domain SCD_RS08445 73435b4ff654d1b3415eb43e33dd4661 605 SUPERFAMILY SSF55073 449 602 3.92E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS10955 4b4d493cbf9e6444c0f7fa31892e163b 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 1.0E-54 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SCD_RS10955 4b4d493cbf9e6444c0f7fa31892e163b 126 Gene3D G3DSA:2.40.40.20 1 124 7.0E-55 T 22-04-2016 SCD_RS10955 4b4d493cbf9e6444c0f7fa31892e163b 126 PIRSF PIRSF006246 1 126 4.1E-51 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SCD_RS10955 4b4d493cbf9e6444c0f7fa31892e163b 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 71.636 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SCD_RS10955 4b4d493cbf9e6444c0f7fa31892e163b 126 SUPERFAMILY SSF50692 1 122 7.08E-49 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SCD_RS10955 4b4d493cbf9e6444c0f7fa31892e163b 126 PANTHER PTHR21012 2 126 3.1E-65 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SCD_RS10955 4b4d493cbf9e6444c0f7fa31892e163b 126 Pfam PF02261 Aspartate decarboxylase 1 114 6.0E-50 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SCD_RS10955 4b4d493cbf9e6444c0f7fa31892e163b 126 PANTHER PTHR21012:SF0 2 126 3.1E-65 T 22-04-2016 SCD_RS10955 4b4d493cbf9e6444c0f7fa31892e163b 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 125 1.5E-50 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SCD_RS10025 0f5b6c71ff3d662c433d0f966752208b 177 Gene3D G3DSA:3.40.50.700 44 168 1.8E-28 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SCD_RS10025 0f5b6c71ff3d662c433d0f966752208b 177 SUPERFAMILY SSF56770 44 166 4.71E-48 T 22-04-2016 SCD_RS10025 0f5b6c71ff3d662c433d0f966752208b 177 PANTHER PTHR11995:SF3 26 166 2.7E-52 T 22-04-2016 SCD_RS10025 0f5b6c71ff3d662c433d0f966752208b 177 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 54 163 1.3E-25 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SCD_RS10025 0f5b6c71ff3d662c433d0f966752208b 177 PANTHER PTHR11995 26 166 2.7E-52 T 22-04-2016 SCD_RS05620 dda0e3b8e03bd0cee56366586bfb3202 238 PANTHER PTHR24220:SF568 3 238 2.4E-115 T 22-04-2016 SCD_RS05620 dda0e3b8e03bd0cee56366586bfb3202 238 SMART SM00382 26 216 1.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS05620 dda0e3b8e03bd0cee56366586bfb3202 238 SUPERFAMILY SSF52540 2 236 4.14E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05620 dda0e3b8e03bd0cee56366586bfb3202 238 Pfam PF00005 ABC transporter 20 167 8.4E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS05620 dda0e3b8e03bd0cee56366586bfb3202 238 Gene3D G3DSA:3.40.50.300 1 235 5.4E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05620 dda0e3b8e03bd0cee56366586bfb3202 238 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS05620 dda0e3b8e03bd0cee56366586bfb3202 238 PANTHER PTHR24220 3 238 2.4E-115 T 22-04-2016 SCD_RS06580 4e1819240f596617a76f719800d61595 175 Gene3D G3DSA:3.30.1950.10 22 85 3.0E-20 T 22-04-2016 SCD_RS06580 4e1819240f596617a76f719800d61595 175 Gene3D G3DSA:3.10.560.10 86 175 4.8E-16 T 22-04-2016 SCD_RS06580 4e1819240f596617a76f719800d61595 175 PANTHER PTHR33619 14 175 3.8E-39 T 22-04-2016 SCD_RS06580 4e1819240f596617a76f719800d61595 175 Pfam PF02563 Polysaccharide biosynthesis/export protein 14 86 4.2E-22 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 SCD_RS05235 4110245dc034850b1900826b1470559e 226 Gene3D G3DSA:1.10.3720.10 10 221 1.5E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SCD_RS05235 4110245dc034850b1900826b1470559e 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 212 2.1E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SCD_RS05235 4110245dc034850b1900826b1470559e 226 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 11 218 1.2E-70 T 22-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 SCD_RS05235 4110245dc034850b1900826b1470559e 226 PANTHER PTHR30183 1 224 5.7E-65 T 22-04-2016 SCD_RS05235 4110245dc034850b1900826b1470559e 226 SUPERFAMILY SSF161098 8 215 1.31E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SCD_RS14960 ee9f124367493f060b47a5240f083ba0 511 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 373 1.1E-74 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS14960 ee9f124367493f060b47a5240f083ba0 511 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 380 505 1.3E-42 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS14960 ee9f124367493f060b47a5240f083ba0 511 Gene3D G3DSA:1.20.150.20 381 508 3.4E-45 T 22-04-2016 SCD_RS14960 ee9f124367493f060b47a5240f083ba0 511 SUPERFAMILY SSF52540 96 379 2.45E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14960 ee9f124367493f060b47a5240f083ba0 511 PANTHER PTHR15184:SF3 1 494 1.2E-288 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS14960 ee9f124367493f060b47a5240f083ba0 511 Gene3D G3DSA:2.40.30.20 1 93 6.6E-35 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS14960 ee9f124367493f060b47a5240f083ba0 511 PANTHER PTHR15184 1 494 1.2E-288 T 22-04-2016 SCD_RS14960 ee9f124367493f060b47a5240f083ba0 511 SUPERFAMILY SSF50615 10 94 1.04E-29 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS14960 ee9f124367493f060b47a5240f083ba0 511 Gene3D G3DSA:3.40.50.300 94 380 3.5E-116 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14960 ee9f124367493f060b47a5240f083ba0 511 SUPERFAMILY SSF47917 381 508 3.92E-43 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS14960 ee9f124367493f060b47a5240f083ba0 511 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 510 50.441 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS14960 ee9f124367493f060b47a5240f083ba0 511 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 92 2.8E-16 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS14960 ee9f124367493f060b47a5240f083ba0 511 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 508 1.1E-248 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS14960 ee9f124367493f060b47a5240f083ba0 511 PIRSF PIRSF039088 1 511 2.7E-236 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS14960 ee9f124367493f060b47a5240f083ba0 511 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 364 373 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS00190 57b92ee6896952a96cef3f5a8ec572bd 431 Gene3D G3DSA:3.30.470.20 190 326 5.0E-60 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SCD_RS00190 57b92ee6896952a96cef3f5a8ec572bd 431 Gene3D G3DSA:3.90.600.10 329 427 1.4E-32 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SCD_RS00190 57b92ee6896952a96cef3f5a8ec572bd 431 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 427 42.108 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SCD_RS00190 57b92ee6896952a96cef3f5a8ec572bd 431 SUPERFAMILY SSF51246 327 427 1.05E-29 T 22-04-2016 IPR011054 Rudiment single hybrid motif SCD_RS00190 57b92ee6896952a96cef3f5a8ec572bd 431 SUPERFAMILY SSF52440 1 101 4.32E-34 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SCD_RS00190 57b92ee6896952a96cef3f5a8ec572bd 431 Gene3D G3DSA:3.40.50.20 2 93 1.1E-36 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SCD_RS00190 57b92ee6896952a96cef3f5a8ec572bd 431 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 427 4.8E-168 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SCD_RS00190 57b92ee6896952a96cef3f5a8ec572bd 431 SUPERFAMILY SSF56059 102 322 4.07E-61 T 22-04-2016 SCD_RS00190 57b92ee6896952a96cef3f5a8ec572bd 431 Gene3D G3DSA:3.30.1490.20 119 188 8.8E-33 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SCD_RS00190 57b92ee6896952a96cef3f5a8ec572bd 431 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 294 3.7E-75 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SCD_RS00190 57b92ee6896952a96cef3f5a8ec572bd 431 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 5.2E-36 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SCD_RS00190 57b92ee6896952a96cef3f5a8ec572bd 431 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 425 1.4E-27 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SCD_RS00190 57b92ee6896952a96cef3f5a8ec572bd 431 PANTHER PTHR10520 1 430 1.6E-254 T 22-04-2016 SCD_RS00190 57b92ee6896952a96cef3f5a8ec572bd 431 SMART SM01209 101 294 1.9E-131 T 22-04-2016 SCD_RS00190 57b92ee6896952a96cef3f5a8ec572bd 431 SMART SM01210 328 427 1.5E-48 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SCD_RS09570 0cc6c68af9d3fa323d722ced5606171e 483 Pfam PF00534 Glycosyl transferases group 1 305 453 2.6E-19 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SCD_RS09570 0cc6c68af9d3fa323d722ced5606171e 483 PANTHER PTHR12526 13 481 4.0E-156 T 22-04-2016 SCD_RS09570 0cc6c68af9d3fa323d722ced5606171e 483 Pfam PF08323 Starch synthase catalytic domain 14 251 3.2E-72 T 22-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 SCD_RS09570 0cc6c68af9d3fa323d722ced5606171e 483 Hamap MF_00484 Glycogen synthase [glgA]. 13 483 45.075 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 SCD_RS09570 0cc6c68af9d3fa323d722ced5606171e 483 PANTHER PTHR12526:SF295 13 481 4.0E-156 T 22-04-2016 SCD_RS09570 0cc6c68af9d3fa323d722ced5606171e 483 Gene3D G3DSA:3.40.50.2000 265 465 1.6E-77 T 22-04-2016 SCD_RS09570 0cc6c68af9d3fa323d722ced5606171e 483 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 14 482 1.9E-174 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 SCD_RS09570 0cc6c68af9d3fa323d722ced5606171e 483 SUPERFAMILY SSF53756 12 482 9.74E-126 T 22-04-2016 SCD_RS00800 601a3d658a5ab2e5d31b5c703bfb7f07 196 Gene3D G3DSA:1.10.357.10 9 194 6.8E-33 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SCD_RS00800 601a3d658a5ab2e5d31b5c703bfb7f07 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 59 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SCD_RS00800 601a3d658a5ab2e5d31b5c703bfb7f07 196 SUPERFAMILY SSF48498 84 195 6.12E-8 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SCD_RS00800 601a3d658a5ab2e5d31b5c703bfb7f07 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 3.6E-16 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SCD_RS00800 601a3d658a5ab2e5d31b5c703bfb7f07 196 PANTHER PTHR30055 1 192 2.0E-26 T 22-04-2016 SCD_RS00800 601a3d658a5ab2e5d31b5c703bfb7f07 196 SUPERFAMILY SSF46689 3 86 1.56E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS00800 601a3d658a5ab2e5d31b5c703bfb7f07 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 8.6E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SCD_RS00800 601a3d658a5ab2e5d31b5c703bfb7f07 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 8.6E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SCD_RS04685 b728f4b6e53bd2f50be24076ee00165c 419 PANTHER PTHR11993 3 164 4.9E-240 T 22-04-2016 SCD_RS04685 b728f4b6e53bd2f50be24076ee00165c 419 PANTHER PTHR11993 192 414 4.9E-240 T 22-04-2016 SCD_RS04685 b728f4b6e53bd2f50be24076ee00165c 419 PANTHER PTHR11993:SF10 3 164 4.9E-240 T 22-04-2016 SCD_RS04685 b728f4b6e53bd2f50be24076ee00165c 419 PANTHER PTHR11993:SF10 192 414 4.9E-240 T 22-04-2016 SCD_RS04685 b728f4b6e53bd2f50be24076ee00165c 419 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 419 50.483 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 SCD_RS04685 b728f4b6e53bd2f50be24076ee00165c 419 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 22-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 SCD_RS04685 b728f4b6e53bd2f50be24076ee00165c 419 Gene3D G3DSA:1.10.645.10 7 410 6.4E-64 T 22-04-2016 IPR029014 NiFe hydrogenase-like SCD_RS04685 b728f4b6e53bd2f50be24076ee00165c 419 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 419 1.6E-186 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 SCD_RS04685 b728f4b6e53bd2f50be24076ee00165c 419 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 419 2.5E-125 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 SCD_RS04685 b728f4b6e53bd2f50be24076ee00165c 419 SUPERFAMILY SSF56762 16 167 1.05E-137 T 22-04-2016 IPR029014 NiFe hydrogenase-like SCD_RS04685 b728f4b6e53bd2f50be24076ee00165c 419 SUPERFAMILY SSF56762 195 419 1.05E-137 T 22-04-2016 IPR029014 NiFe hydrogenase-like SCD_RS08935 7ce5e3703dc9de78270e544d17d468a7 465 Gene3D G3DSA:3.30.300.20 358 432 1.1E-22 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SCD_RS08935 7ce5e3703dc9de78270e544d17d468a7 465 PANTHER PTHR11649 1 432 7.4E-140 T 22-04-2016 SCD_RS08935 7ce5e3703dc9de78270e544d17d468a7 465 Gene3D G3DSA:3.40.50.300 171 357 3.2E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08935 7ce5e3703dc9de78270e544d17d468a7 465 Gene3D G3DSA:3.40.50.300 2 170 1.2E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08935 7ce5e3703dc9de78270e544d17d468a7 465 PANTHER PTHR11649:SF5 1 432 7.4E-140 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SCD_RS08935 7ce5e3703dc9de78270e544d17d468a7 465 SMART SM00382 174 312 0.23 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS08935 7ce5e3703dc9de78270e544d17d468a7 465 SMART SM00382 1 142 2.4 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS08935 7ce5e3703dc9de78270e544d17d468a7 465 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 351 431 3.4E-24 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like SCD_RS08935 7ce5e3703dc9de78270e544d17d468a7 465 Pfam PF01926 50S ribosome-binding GTPase 177 295 6.9E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS08935 7ce5e3703dc9de78270e544d17d468a7 465 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.9E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS08935 7ce5e3703dc9de78270e544d17d468a7 465 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 431 4.4E-169 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SCD_RS08935 7ce5e3703dc9de78270e544d17d468a7 465 Hamap MF_00195 GTPase Der [der]. 2 434 37.554 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SCD_RS08935 7ce5e3703dc9de78270e544d17d468a7 465 SUPERFAMILY SSF52540 138 438 2.33E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08935 7ce5e3703dc9de78270e544d17d468a7 465 PIRSF PIRSF006485 1 439 2.4E-169 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SCD_RS08935 7ce5e3703dc9de78270e544d17d468a7 465 SUPERFAMILY SSF52540 3 163 7.02E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08935 7ce5e3703dc9de78270e544d17d468a7 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 3.6E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS08935 7ce5e3703dc9de78270e544d17d468a7 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.6E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS08935 7ce5e3703dc9de78270e544d17d468a7 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 155 1.5E-17 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SCD_RS08935 7ce5e3703dc9de78270e544d17d468a7 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 175 341 5.7E-27 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SCD_RS00420 4c1da75f1d9f5f781ec86f8fda3ab599 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 451 466 2.9E-27 T 22-04-2016 SCD_RS00420 4c1da75f1d9f5f781ec86f8fda3ab599 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 468 483 2.9E-27 T 22-04-2016 SCD_RS00420 4c1da75f1d9f5f781ec86f8fda3ab599 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 298 317 2.9E-27 T 22-04-2016 SCD_RS00420 4c1da75f1d9f5f781ec86f8fda3ab599 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 504 516 2.9E-27 T 22-04-2016 SCD_RS00420 4c1da75f1d9f5f781ec86f8fda3ab599 574 Gene3D G3DSA:3.20.20.60 261 572 1.2E-104 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SCD_RS00420 4c1da75f1d9f5f781ec86f8fda3ab599 574 SUPERFAMILY SSF47831 28 146 6.54E-29 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SCD_RS00420 4c1da75f1d9f5f781ec86f8fda3ab599 574 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 189 200 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 SCD_RS00420 4c1da75f1d9f5f781ec86f8fda3ab599 574 Pfam PF00391 PEP-utilising enzyme, mobile domain 161 230 2.7E-21 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SCD_RS00420 4c1da75f1d9f5f781ec86f8fda3ab599 574 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 6 568 8.7E-167 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 SCD_RS00420 4c1da75f1d9f5f781ec86f8fda3ab599 574 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 451 469 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 SCD_RS00420 4c1da75f1d9f5f781ec86f8fda3ab599 574 SUPERFAMILY SSF51621 254 549 7.85E-102 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SCD_RS00420 4c1da75f1d9f5f781ec86f8fda3ab599 574 PANTHER PTHR22931:SF28 73 554 3.4E-159 T 22-04-2016 SCD_RS00420 4c1da75f1d9f5f781ec86f8fda3ab599 574 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 129 3.2E-27 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SCD_RS00420 4c1da75f1d9f5f781ec86f8fda3ab599 574 SUPERFAMILY SSF52009 128 250 1.44E-30 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SCD_RS00420 4c1da75f1d9f5f781ec86f8fda3ab599 574 PANTHER PTHR22931 73 554 3.4E-159 T 22-04-2016 SCD_RS00420 4c1da75f1d9f5f781ec86f8fda3ab599 574 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 256 544 9.3E-107 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SCD_RS00420 4c1da75f1d9f5f781ec86f8fda3ab599 574 PIRSF PIRSF000732 1 574 8.0E-208 T 22-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 SCD_RS00420 4c1da75f1d9f5f781ec86f8fda3ab599 574 Gene3D G3DSA:3.50.30.10 137 260 8.9E-41 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SCD_RS00420 4c1da75f1d9f5f781ec86f8fda3ab599 574 Gene3D G3DSA:1.10.274.10 28 136 2.2E-31 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SCD_RS13500 45f51620fbd1326b5411408c26ef1731 332 PANTHER PTHR39573 5 332 2.7E-149 T 22-04-2016 SCD_RS13500 45f51620fbd1326b5411408c26ef1731 332 Gene3D G3DSA:3.90.1200.10 116 329 3.0E-55 T 22-04-2016 SCD_RS13500 45f51620fbd1326b5411408c26ef1731 332 Hamap MF_01497 Stress response kinase A [srkA]. 7 325 48.401 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 SCD_RS13500 45f51620fbd1326b5411408c26ef1731 332 PANTHER PTHR39573:SF1 5 332 2.7E-149 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 SCD_RS13500 45f51620fbd1326b5411408c26ef1731 332 SUPERFAMILY SSF56112 9 330 8.04E-86 T 22-04-2016 IPR011009 Protein kinase-like domain SCD_RS13500 45f51620fbd1326b5411408c26ef1731 332 Pfam PF01636 Phosphotransferase enzyme family 39 262 7.2E-40 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase SCD_RS10060 7d7bd83bcc141504c92a669f87e15d60 779 Pfam PF00092 von Willebrand factor type A domain 590 751 1.7E-7 T 22-04-2016 IPR002035 von Willebrand factor, type A SCD_RS10060 7d7bd83bcc141504c92a669f87e15d60 779 SUPERFAMILY SSF53300 588 773 2.23E-19 T 22-04-2016 IPR002035 von Willebrand factor, type A SCD_RS10060 7d7bd83bcc141504c92a669f87e15d60 779 PANTHER PTHR41248:SF1 122 779 2.7E-23 T 22-04-2016 SCD_RS10060 7d7bd83bcc141504c92a669f87e15d60 779 SMART SM00327 587 778 9.8E-9 T 22-04-2016 IPR002035 von Willebrand factor, type A SCD_RS10060 7d7bd83bcc141504c92a669f87e15d60 779 Gene3D G3DSA:3.40.50.410 590 767 1.2E-8 T 22-04-2016 IPR002035 von Willebrand factor, type A SCD_RS10060 7d7bd83bcc141504c92a669f87e15d60 779 PANTHER PTHR41248 122 779 2.7E-23 T 22-04-2016 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1057 13.151 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 SUPERFAMILY SSF48108 396 548 1.83E-53 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 Gene3D G3DSA:1.10.1030.10 400 533 1.1E-51 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1045 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 704 718 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 SUPERFAMILY SSF56059 668 928 4.77E-105 T 22-04-2016 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 Gene3D G3DSA:3.30.1490.20 141 200 8.8E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 Gene3D G3DSA:3.40.50.20 534 657 2.8E-60 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 Gene3D G3DSA:3.30.470.20 201 399 7.7E-76 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 Gene3D G3DSA:3.30.470.20 740 929 1.8E-79 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 SUPERFAMILY SSF56059 128 401 1.94E-108 T 22-04-2016 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 833 840 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 PANTHER PTHR11405:SF5 1 1055 0.0 T 22-04-2016 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 SUPERFAMILY SSF52440 1 127 5.75E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 PANTHER PTHR11405 1 1055 0.0 T 22-04-2016 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 SMART SM01096 419 542 7.6E-74 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 422 542 4.4E-39 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 Gene3D G3DSA:3.30.1490.20 681 739 8.8E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 Gene3D G3DSA:3.40.50.1380 932 1065 3.2E-43 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 SUPERFAMILY SSF52335 930 1065 6.93E-42 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 SMART SM00851 950 1036 1.0E-32 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 Pfam PF02142 MGS-like domain 951 1036 2.9E-19 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1062 13.469 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 SUPERFAMILY SSF52440 552 670 3.45E-48 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 5.5E-65 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 5.5E-65 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 5.5E-65 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 5.5E-65 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 5.5E-65 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 5.5E-65 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 5.5E-65 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 Gene3D G3DSA:3.40.50.20 3 108 3.6E-44 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 668 870 8.6E-36 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SCD_RS04570 c9d4e3d3eee8a1dc4a7938b06215c410 1069 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 6.8E-73 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SCD_RS13465 2cc9fc3ab49a5b8408fce20bd33a9812 285 ProSitePatterns PS00380 Rhodanese signature 1. 40 51 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 SCD_RS13465 2cc9fc3ab49a5b8408fce20bd33a9812 285 Pfam PF00581 Rhodanese-like domain 9 128 2.0E-18 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS13465 2cc9fc3ab49a5b8408fce20bd33a9812 285 Pfam PF00581 Rhodanese-like domain 158 271 8.6E-12 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS13465 2cc9fc3ab49a5b8408fce20bd33a9812 285 Gene3D G3DSA:3.40.250.10 158 282 3.5E-31 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS13465 2cc9fc3ab49a5b8408fce20bd33a9812 285 SUPERFAMILY SSF52821 161 282 4.19E-28 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS13465 2cc9fc3ab49a5b8408fce20bd33a9812 285 Gene3D G3DSA:3.40.250.10 1 152 2.1E-47 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS13465 2cc9fc3ab49a5b8408fce20bd33a9812 285 SMART SM00450 156 276 9.1E-9 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS13465 2cc9fc3ab49a5b8408fce20bd33a9812 285 SMART SM00450 7 133 1.8E-19 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS13465 2cc9fc3ab49a5b8408fce20bd33a9812 285 PANTHER PTHR11364:SF0 1 285 1.2E-90 T 22-04-2016 SCD_RS13465 2cc9fc3ab49a5b8408fce20bd33a9812 285 SUPERFAMILY SSF52821 2 153 1.27E-40 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS13465 2cc9fc3ab49a5b8408fce20bd33a9812 285 PANTHER PTHR11364 1 285 1.2E-90 T 22-04-2016 SCD_RS01550 aef6690e2bba01a508d1f0ad19321b71 297 SUPERFAMILY SSF56349 7 286 3.24E-56 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SCD_RS01550 aef6690e2bba01a508d1f0ad19321b71 297 PANTHER PTHR30349:SF17 7 296 1.5E-130 T 22-04-2016 SCD_RS01550 aef6690e2bba01a508d1f0ad19321b71 297 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 4 293 34.875 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD SCD_RS01550 aef6690e2bba01a508d1f0ad19321b71 297 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 87 1.4E-18 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SCD_RS01550 aef6690e2bba01a508d1f0ad19321b71 297 Gene3D G3DSA:1.10.150.130 7 97 1.8E-23 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SCD_RS01550 aef6690e2bba01a508d1f0ad19321b71 297 Gene3D G3DSA:1.10.443.10 110 287 1.6E-54 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SCD_RS01550 aef6690e2bba01a508d1f0ad19321b71 297 PANTHER PTHR30349 7 296 1.5E-130 T 22-04-2016 SCD_RS01550 aef6690e2bba01a508d1f0ad19321b71 297 Pfam PF00589 Phage integrase family 111 279 1.4E-45 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SCD_RS01550 aef6690e2bba01a508d1f0ad19321b71 297 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 10 295 1.7E-109 T 22-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 SCD_RS15890 fab928da9204d1628b94ef1b42730054 176 SUPERFAMILY SSF48695 45 124 3.04E-12 T 22-04-2016 IPR011031 Multihaem cytochrome SCD_RS15890 fab928da9204d1628b94ef1b42730054 176 Gene3D G3DSA:3.90.10.10 36 130 8.8E-8 T 22-04-2016 SCD_RS10100 cb5e3528183146ff9b277711d8e19d2f 293 Gene3D G3DSA:3.30.470.20 117 248 4.3E-55 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SCD_RS10100 cb5e3528183146ff9b277711d8e19d2f 293 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 13 293 26.673 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SCD_RS10100 cb5e3528183146ff9b277711d8e19d2f 293 ProSitePatterns PS01058 SAICAR synthetase signature 2. 205 213 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SCD_RS10100 cb5e3528183146ff9b277711d8e19d2f 293 PANTHER PTHR11609:SF6 1 293 1.8E-139 T 22-04-2016 SCD_RS10100 cb5e3528183146ff9b277711d8e19d2f 293 Gene3D G3DSA:3.30.200.20 6 116 1.7E-44 T 22-04-2016 SCD_RS10100 cb5e3528183146ff9b277711d8e19d2f 293 PANTHER PTHR11609 1 293 1.8E-139 T 22-04-2016 SCD_RS10100 cb5e3528183146ff9b277711d8e19d2f 293 Pfam PF01259 SAICAR synthetase 15 268 2.2E-103 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SCD_RS10100 cb5e3528183146ff9b277711d8e19d2f 293 SUPERFAMILY SSF56104 6 292 1.34E-103 T 22-04-2016 SCD_RS10100 cb5e3528183146ff9b277711d8e19d2f 293 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 16 292 4.9E-79 T 22-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SCD_RS09365 f4a3154048f35e4f7bf2259ee53a432e 336 PANTHER PTHR30160:SF13 1 330 1.2E-87 T 22-04-2016 SCD_RS09365 f4a3154048f35e4f7bf2259ee53a432e 336 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 21 315 1.1E-83 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 SCD_RS09365 f4a3154048f35e4f7bf2259ee53a432e 336 PANTHER PTHR30160 1 330 1.2E-87 T 22-04-2016 SCD_RS09365 f4a3154048f35e4f7bf2259ee53a432e 336 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 3 328 40.838 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 SCD_RS09365 f4a3154048f35e4f7bf2259ee53a432e 336 Gene3D G3DSA:3.40.50.300 48 120 1.4E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS09365 f4a3154048f35e4f7bf2259ee53a432e 336 Gene3D G3DSA:3.40.50.300 189 200 1.4E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS09365 f4a3154048f35e4f7bf2259ee53a432e 336 SUPERFAMILY SSF52540 48 160 5.02E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS09365 f4a3154048f35e4f7bf2259ee53a432e 336 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 14 327 9.5E-110 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 SCD_RS04860 df2238893a539b013803b7a413a3e58b 633 SUPERFAMILY SSF52540 317 528 1.19E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04860 df2238893a539b013803b7a413a3e58b 633 PANTHER PTHR19211:SF45 1 570 9.3E-228 T 22-04-2016 SCD_RS04860 df2238893a539b013803b7a413a3e58b 633 SUPERFAMILY SSF52540 4 233 1.33E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04860 df2238893a539b013803b7a413a3e58b 633 SMART SM00382 28 232 2.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS04860 df2238893a539b013803b7a413a3e58b 633 SMART SM00382 346 517 1.7E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS04860 df2238893a539b013803b7a413a3e58b 633 PANTHER PTHR19211 1 570 9.3E-228 T 22-04-2016 SCD_RS04860 df2238893a539b013803b7a413a3e58b 633 Pfam PF16326 ABC transporter C-terminal domain 560 629 9.4E-20 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 SCD_RS04860 df2238893a539b013803b7a413a3e58b 633 Pfam PF00005 ABC transporter 19 187 7.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS04860 df2238893a539b013803b7a413a3e58b 633 Pfam PF00005 ABC transporter 339 471 5.3E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS04860 df2238893a539b013803b7a413a3e58b 633 ProSitePatterns PS00211 ABC transporters family signature. 443 457 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS04860 df2238893a539b013803b7a413a3e58b 633 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS04860 df2238893a539b013803b7a413a3e58b 633 Pfam PF12848 ABC transporter 226 295 4.2E-9 T 22-04-2016 IPR032781 ABC-transporter extension domain SCD_RS04860 df2238893a539b013803b7a413a3e58b 633 Gene3D G3DSA:3.40.50.300 2 90 9.8E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04860 df2238893a539b013803b7a413a3e58b 633 Gene3D G3DSA:3.40.50.300 323 550 5.3E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04860 df2238893a539b013803b7a413a3e58b 633 Gene3D G3DSA:3.40.50.300 123 263 9.8E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS01475 8a20bf0ba8095525c3ece536e7b5ca97 1016 PANTHER PTHR32063 3 1014 0.0 T 22-04-2016 SCD_RS01475 8a20bf0ba8095525c3ece536e7b5ca97 1016 Gene3D G3DSA:1.10.3850.10 798 1011 6.8E-53 T 22-04-2016 SCD_RS01475 8a20bf0ba8095525c3ece536e7b5ca97 1016 Gene3D G3DSA:1.10.3850.10 277 491 5.7E-45 T 22-04-2016 SCD_RS01475 8a20bf0ba8095525c3ece536e7b5ca97 1016 SUPERFAMILY SSF82693 140 185 9.42E-17 T 22-04-2016 SCD_RS01475 8a20bf0ba8095525c3ece536e7b5ca97 1016 Gene3D G3DSA:3.30.70.1430 43 141 5.9E-21 T 22-04-2016 SCD_RS01475 8a20bf0ba8095525c3ece536e7b5ca97 1016 SUPERFAMILY SSF82866 791 1012 3.66E-47 T 22-04-2016 SCD_RS01475 8a20bf0ba8095525c3ece536e7b5ca97 1016 SUPERFAMILY SSF82693 271 326 9.42E-17 T 22-04-2016 SCD_RS01475 8a20bf0ba8095525c3ece536e7b5ca97 1016 Gene3D G3DSA:3.30.2090.10 188 268 2.5E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS01475 8a20bf0ba8095525c3ece536e7b5ca97 1016 Gene3D G3DSA:3.30.2090.10 708 793 5.9E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS01475 8a20bf0ba8095525c3ece536e7b5ca97 1016 SUPERFAMILY SSF82714 709 793 1.7E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS01475 8a20bf0ba8095525c3ece536e7b5ca97 1016 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 1.8E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS01475 8a20bf0ba8095525c3ece536e7b5ca97 1016 PRINTS PR00702 Acriflavin resistance protein family signature 13 37 1.8E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS01475 8a20bf0ba8095525c3ece536e7b5ca97 1016 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 1.8E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS01475 8a20bf0ba8095525c3ece536e7b5ca97 1016 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 1.8E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS01475 8a20bf0ba8095525c3ece536e7b5ca97 1016 PRINTS PR00702 Acriflavin resistance protein family signature 41 59 1.8E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS01475 8a20bf0ba8095525c3ece536e7b5ca97 1016 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 1.8E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS01475 8a20bf0ba8095525c3ece536e7b5ca97 1016 SUPERFAMILY SSF82693 43 139 2.35E-19 T 22-04-2016 SCD_RS01475 8a20bf0ba8095525c3ece536e7b5ca97 1016 SUPERFAMILY SSF82693 556 647 7.85E-6 T 22-04-2016 SCD_RS01475 8a20bf0ba8095525c3ece536e7b5ca97 1016 Pfam PF00873 AcrB/AcrD/AcrF family 7 1008 9.8E-175 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS01475 8a20bf0ba8095525c3ece536e7b5ca97 1016 SUPERFAMILY SSF82866 303 491 1.29E-36 T 22-04-2016 SCD_RS01475 8a20bf0ba8095525c3ece536e7b5ca97 1016 SUPERFAMILY SSF82714 188 268 4.71E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS01475 8a20bf0ba8095525c3ece536e7b5ca97 1016 Gene3D G3DSA:3.30.70.1430 559 633 1.3E-4 T 22-04-2016 SCD_RS01475 8a20bf0ba8095525c3ece536e7b5ca97 1016 PANTHER PTHR32063:SF18 3 1014 0.0 T 22-04-2016 SCD_RS10555 f7857936cd75a4a6b73edcb8be644096 308 PIRSF PIRSF004491 2 308 1.2E-106 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SCD_RS10555 f7857936cd75a4a6b73edcb8be644096 308 PANTHER PTHR22749 9 308 9.2E-125 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 SCD_RS10555 f7857936cd75a4a6b73edcb8be644096 308 Pfam PF06574 FAD synthetase 13 164 2.6E-55 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SCD_RS10555 f7857936cd75a4a6b73edcb8be644096 308 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 16 305 3.4E-91 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SCD_RS10555 f7857936cd75a4a6b73edcb8be644096 308 SUPERFAMILY SSF82114 172 305 5.67E-42 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SCD_RS10555 f7857936cd75a4a6b73edcb8be644096 308 Gene3D G3DSA:2.40.30.30 186 305 4.0E-38 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 SCD_RS10555 f7857936cd75a4a6b73edcb8be644096 308 Gene3D G3DSA:3.40.50.620 10 184 3.6E-67 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS10555 f7857936cd75a4a6b73edcb8be644096 308 PANTHER PTHR22749:SF0 9 308 9.2E-125 T 22-04-2016 SCD_RS10555 f7857936cd75a4a6b73edcb8be644096 308 SMART SM00904 181 306 3.1E-56 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SCD_RS10555 f7857936cd75a4a6b73edcb8be644096 308 SUPERFAMILY SSF52374 14 173 1.03E-35 T 22-04-2016 SCD_RS10555 f7857936cd75a4a6b73edcb8be644096 308 Pfam PF01687 Riboflavin kinase 182 305 6.9E-36 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SCD_RS06440 5b6474db04a6d13918b28e70e326aff5 450 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 172 185 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SCD_RS06440 5b6474db04a6d13918b28e70e326aff5 450 TIGRFAM TIGR02915 PEP_resp_reg: PEP-CTERM-box response regulator transcription factor 8 448 1.8E-222 T 22-04-2016 IPR014264 Signal transduction response regulator, PEP-CTERM system, putative SCD_RS06440 5b6474db04a6d13918b28e70e326aff5 450 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SCD_RS06440 5b6474db04a6d13918b28e70e326aff5 450 Gene3D G3DSA:3.40.50.300 146 320 1.2E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06440 5b6474db04a6d13918b28e70e326aff5 450 Gene3D G3DSA:1.10.8.60 321 391 7.7E-21 T 22-04-2016 SCD_RS06440 5b6474db04a6d13918b28e70e326aff5 450 SMART SM00382 168 311 2.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS06440 5b6474db04a6d13918b28e70e326aff5 450 Gene3D G3DSA:1.10.10.60 393 448 1.1E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS06440 5b6474db04a6d13918b28e70e326aff5 450 Pfam PF00158 Sigma-54 interaction domain 148 313 2.2E-67 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SCD_RS06440 5b6474db04a6d13918b28e70e326aff5 450 SUPERFAMILY SSF52540 147 389 1.16E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06440 5b6474db04a6d13918b28e70e326aff5 450 Pfam PF00072 Response regulator receiver domain 9 116 6.7E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS06440 5b6474db04a6d13918b28e70e326aff5 450 Gene3D G3DSA:3.40.50.2300 5 138 1.7E-24 T 22-04-2016 SCD_RS06440 5b6474db04a6d13918b28e70e326aff5 450 SUPERFAMILY SSF46689 361 447 7.47E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS06440 5b6474db04a6d13918b28e70e326aff5 450 SMART SM00448 6 120 2.3E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS06440 5b6474db04a6d13918b28e70e326aff5 450 SUPERFAMILY SSF52172 5 193 1.25E-29 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS06440 5b6474db04a6d13918b28e70e326aff5 450 Pfam PF02954 Bacterial regulatory protein, Fis family 405 439 4.2E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS06440 5b6474db04a6d13918b28e70e326aff5 450 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 428 448 4.0E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS06440 5b6474db04a6d13918b28e70e326aff5 450 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 411 428 4.0E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS06440 5b6474db04a6d13918b28e70e326aff5 450 PANTHER PTHR32071 1 447 1.0E-167 T 22-04-2016 SCD_RS03460 91b0bde392efa0fafe57147c1f14905f 93 TIGRFAM TIGR03322 alt_F1F0_F0_C: alternate F1F0 ATPase, F0 subunit C 2 87 3.5E-51 T 22-04-2016 IPR017708 ATPase, F0 complex, subunit C, bacterial/archaeal SCD_RS03460 91b0bde392efa0fafe57147c1f14905f 93 Gene3D G3DSA:1.20.20.10 10 78 3.1E-21 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SCD_RS03460 91b0bde392efa0fafe57147c1f14905f 93 SUPERFAMILY SSF81333 4 81 5.1E-17 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SCD_RS03460 91b0bde392efa0fafe57147c1f14905f 93 Hamap MF_01396 ATP synthase subunit c [atpH]. 11 79 15.234 T 22-04-2016 SCD_RS03460 91b0bde392efa0fafe57147c1f14905f 93 Pfam PF00137 ATP synthase subunit C 13 76 4.0E-12 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SCD_RS03460 91b0bde392efa0fafe57147c1f14905f 93 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 23 79 1.2E-14 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SCD_RS03460 91b0bde392efa0fafe57147c1f14905f 93 PANTHER PTHR10031 3 80 4.0E-21 T 22-04-2016 SCD_RS03460 91b0bde392efa0fafe57147c1f14905f 93 PRINTS PR00124 ATP synthase C subunit signature 14 33 1.8E-12 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SCD_RS03460 91b0bde392efa0fafe57147c1f14905f 93 PRINTS PR00124 ATP synthase C subunit signature 52 77 1.8E-12 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SCD_RS03460 91b0bde392efa0fafe57147c1f14905f 93 PRINTS PR00124 ATP synthase C subunit signature 35 50 1.8E-12 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SCD_RS01420 a768a5ce8e51b6e748297fa5f2de1efb 514 Gene3D G3DSA:3.90.1200.10 243 306 1.7E-8 T 22-04-2016 SCD_RS01420 a768a5ce8e51b6e748297fa5f2de1efb 514 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 514 49.626 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 SCD_RS01420 a768a5ce8e51b6e748297fa5f2de1efb 514 Pfam PF03109 ABC1 family 107 225 6.2E-32 T 22-04-2016 IPR004147 UbiB domain SCD_RS01420 a768a5ce8e51b6e748297fa5f2de1efb 514 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 4 434 1.2E-167 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 SCD_RS01420 a768a5ce8e51b6e748297fa5f2de1efb 514 SUPERFAMILY SSF56112 89 152 6.57E-47 T 22-04-2016 IPR011009 Protein kinase-like domain SCD_RS01420 a768a5ce8e51b6e748297fa5f2de1efb 514 SUPERFAMILY SSF56112 187 427 6.57E-47 T 22-04-2016 IPR011009 Protein kinase-like domain SCD_RS01420 a768a5ce8e51b6e748297fa5f2de1efb 514 PANTHER PTHR10566:SF79 3 499 2.7E-218 T 22-04-2016 SCD_RS01420 a768a5ce8e51b6e748297fa5f2de1efb 514 PANTHER PTHR10566 3 499 2.7E-218 T 22-04-2016 SCD_RS14175 f8d64cda13604d9ca651bfe4956acdad 352 Gene3D G3DSA:3.40.50.2000 169 348 1.8E-38 T 22-04-2016 SCD_RS14175 f8d64cda13604d9ca651bfe4956acdad 352 PANTHER PTHR30160 9 275 3.4E-23 T 22-04-2016 SCD_RS14175 f8d64cda13604d9ca651bfe4956acdad 352 SUPERFAMILY SSF53756 14 348 3.56E-54 T 22-04-2016 SCD_RS14175 f8d64cda13604d9ca651bfe4956acdad 352 Gene3D G3DSA:3.40.50.2000 15 136 4.0E-17 T 22-04-2016 SCD_RS14175 f8d64cda13604d9ca651bfe4956acdad 352 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 86 282 8.8E-25 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 SCD_RS14175 f8d64cda13604d9ca651bfe4956acdad 352 PANTHER PTHR30160:SF7 9 275 3.4E-23 T 22-04-2016 SCD_RS08255 400d1e888982f9e557e483eeb6ef88f9 1173 PIRSF PIRSF005719 1 1169 2.8E-237 T 22-04-2016 IPR024704 Structural maintenance of chromosomes protein SCD_RS08255 400d1e888982f9e557e483eeb6ef88f9 1173 Gene3D G3DSA:3.40.50.300 1011 1166 2.1E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08255 400d1e888982f9e557e483eeb6ef88f9 1173 Gene3D G3DSA:3.40.50.300 2 166 2.1E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08255 400d1e888982f9e557e483eeb6ef88f9 1173 SUPERFAMILY SSF75553 488 674 5.36E-8 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 SCD_RS08255 400d1e888982f9e557e483eeb6ef88f9 1173 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1154 7.1E-61 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal SCD_RS08255 400d1e888982f9e557e483eeb6ef88f9 1173 PANTHER PTHR18937:SF261 441 1171 1.1E-253 T 22-04-2016 SCD_RS08255 400d1e888982f9e557e483eeb6ef88f9 1173 PANTHER PTHR18937:SF261 2 422 1.1E-253 T 22-04-2016 SCD_RS08255 400d1e888982f9e557e483eeb6ef88f9 1173 PANTHER PTHR18937 2 422 1.1E-253 T 22-04-2016 SCD_RS08255 400d1e888982f9e557e483eeb6ef88f9 1173 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1163 21.814 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 SCD_RS08255 400d1e888982f9e557e483eeb6ef88f9 1173 PANTHER PTHR18937 441 1171 1.1E-253 T 22-04-2016 SCD_RS08255 400d1e888982f9e557e483eeb6ef88f9 1173 SUPERFAMILY SSF52540 1047 1168 7.41E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08255 400d1e888982f9e557e483eeb6ef88f9 1173 SUPERFAMILY SSF52540 2 213 7.41E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08255 400d1e888982f9e557e483eeb6ef88f9 1173 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1161 0.0 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 SCD_RS02295 6529f6eb7295c4e0d177f917eaa4ffe3 300 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 77 283 1.9E-15 T 22-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 SCD_RS02295 6529f6eb7295c4e0d177f917eaa4ffe3 300 Gene3D G3DSA:3.60.130.10 97 289 4.2E-24 T 22-04-2016 SCD_RS02295 6529f6eb7295c4e0d177f917eaa4ffe3 300 SUPERFAMILY SSF51197 6 287 8.7E-41 T 22-04-2016 SCD_RS15590 e63cd235ea5cd36db2bd68056cf68714 554 PANTHER PTHR24421:SF1 313 554 4.7E-43 T 22-04-2016 SCD_RS15590 e63cd235ea5cd36db2bd68056cf68714 554 PANTHER PTHR24421 313 554 4.7E-43 T 22-04-2016 SCD_RS15590 e63cd235ea5cd36db2bd68056cf68714 554 Pfam PF07730 Histidine kinase 341 409 3.4E-12 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SCD_RS15590 e63cd235ea5cd36db2bd68056cf68714 554 Pfam PF13426 PAS domain 84 185 2.6E-4 T 22-04-2016 IPR000014 PAS domain SCD_RS15590 e63cd235ea5cd36db2bd68056cf68714 554 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 202 317 1.4E-8 T 22-04-2016 IPR000014 PAS domain SCD_RS15590 e63cd235ea5cd36db2bd68056cf68714 554 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 68 190 2.5E-8 T 22-04-2016 IPR000014 PAS domain SCD_RS15590 e63cd235ea5cd36db2bd68056cf68714 554 SUPERFAMILY SSF55874 404 546 7.86E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15590 e63cd235ea5cd36db2bd68056cf68714 554 SUPERFAMILY SSF55785 58 184 1.92E-12 T 22-04-2016 IPR000014 PAS domain SCD_RS15590 e63cd235ea5cd36db2bd68056cf68714 554 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 451 544 1.0E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15590 e63cd235ea5cd36db2bd68056cf68714 554 Pfam PF08448 PAS fold 204 311 4.1E-14 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS15590 e63cd235ea5cd36db2bd68056cf68714 554 Gene3D G3DSA:3.30.450.20 201 318 6.2E-17 T 22-04-2016 SCD_RS15590 e63cd235ea5cd36db2bd68056cf68714 554 Gene3D G3DSA:3.30.565.10 393 414 3.6E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15590 e63cd235ea5cd36db2bd68056cf68714 554 Gene3D G3DSA:3.30.565.10 446 545 3.6E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15590 e63cd235ea5cd36db2bd68056cf68714 554 SUPERFAMILY SSF55785 183 311 5.31E-18 T 22-04-2016 IPR000014 PAS domain SCD_RS15590 e63cd235ea5cd36db2bd68056cf68714 554 SMART SM00387 448 546 0.0025 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15590 e63cd235ea5cd36db2bd68056cf68714 554 Gene3D G3DSA:3.30.450.20 61 186 2.2E-13 T 22-04-2016 SCD_RS15590 e63cd235ea5cd36db2bd68056cf68714 554 SMART SM00091 71 137 0.0051 T 22-04-2016 IPR000014 PAS domain SCD_RS15590 e63cd235ea5cd36db2bd68056cf68714 554 SMART SM00091 198 264 0.012 T 22-04-2016 IPR000014 PAS domain SCD_RS12145 55b7b108893fad7a2e06474f161fdb9e 156 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 70 151 4.1E-27 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SCD_RS12145 55b7b108893fad7a2e06474f161fdb9e 156 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 118 124 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 SCD_RS12145 55b7b108893fad7a2e06474f161fdb9e 156 SUPERFAMILY SSF46767 69 151 6.67E-26 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SCD_RS12145 55b7b108893fad7a2e06474f161fdb9e 156 PANTHER PTHR10815 35 151 1.8E-42 T 22-04-2016 SCD_RS12145 55b7b108893fad7a2e06474f161fdb9e 156 SUPERFAMILY SSF53155 4 74 1.14E-9 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 SCD_RS12145 55b7b108893fad7a2e06474f161fdb9e 156 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 72 152 3.7E-28 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SCD_RS12145 55b7b108893fad7a2e06474f161fdb9e 156 PANTHER PTHR10815:SF5 35 151 1.8E-42 T 22-04-2016 SCD_RS12145 55b7b108893fad7a2e06474f161fdb9e 156 Gene3D G3DSA:1.10.10.10 69 152 2.0E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS13890 e542133ca468fbc08ad90b0cd5c2f6a5 396 PANTHER PTHR30012:SF0 1 396 8.3E-93 T 22-04-2016 SCD_RS13890 e542133ca468fbc08ad90b0cd5c2f6a5 396 Pfam PF00482 Type II secretion system (T2SS), protein F 266 387 8.8E-25 T 22-04-2016 IPR018076 Type II secretion system F domain SCD_RS13890 e542133ca468fbc08ad90b0cd5c2f6a5 396 Pfam PF00482 Type II secretion system (T2SS), protein F 63 186 4.3E-25 T 22-04-2016 IPR018076 Type II secretion system F domain SCD_RS13890 e542133ca468fbc08ad90b0cd5c2f6a5 396 PANTHER PTHR30012 1 396 8.3E-93 T 22-04-2016 SCD_RS13890 e542133ca468fbc08ad90b0cd5c2f6a5 396 PRINTS PR00812 Bacterial general secretion pathway protein F signature 360 374 2.6E-15 T 22-04-2016 IPR003004 GspF/PilC family SCD_RS13890 e542133ca468fbc08ad90b0cd5c2f6a5 396 PRINTS PR00812 Bacterial general secretion pathway protein F signature 158 186 2.6E-15 T 22-04-2016 IPR003004 GspF/PilC family SCD_RS13890 e542133ca468fbc08ad90b0cd5c2f6a5 396 PRINTS PR00812 Bacterial general secretion pathway protein F signature 376 395 2.6E-15 T 22-04-2016 IPR003004 GspF/PilC family SCD_RS13890 e542133ca468fbc08ad90b0cd5c2f6a5 396 PRINTS PR00812 Bacterial general secretion pathway protein F signature 59 71 2.6E-15 T 22-04-2016 IPR003004 GspF/PilC family SCD_RS13740 ee053ebe6ebfdfd7a606dbd1d9362e1e 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 20 120 1.3E-33 T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 SCD_RS13740 ee053ebe6ebfdfd7a606dbd1d9362e1e 122 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 73 84 - T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 SCD_RS13740 ee053ebe6ebfdfd7a606dbd1d9362e1e 122 PANTHER PTHR34299 1 121 1.4E-36 T 22-04-2016 SCD_RS13740 ee053ebe6ebfdfd7a606dbd1d9362e1e 122 Gene3D G3DSA:1.10.3830.10 6 121 9.5E-44 T 22-04-2016 SCD_RS13740 ee053ebe6ebfdfd7a606dbd1d9362e1e 122 PANTHER PTHR34299:SF1 1 121 1.4E-36 T 22-04-2016 SCD_RS10435 ae78eeeb5910588c700c65735fc03349 372 SUPERFAMILY SSF88697 281 371 1.12E-23 T 22-04-2016 IPR015947 PUA-like domain SCD_RS10435 ae78eeeb5910588c700c65735fc03349 372 SUPERFAMILY SSF53633 9 259 4.32E-69 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SCD_RS10435 ae78eeeb5910588c700c65735fc03349 372 PANTHER PTHR11063 7 372 1.4E-115 T 22-04-2016 SCD_RS10435 ae78eeeb5910588c700c65735fc03349 372 PIRSF PIRSF000729 4 372 1.2E-131 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SCD_RS10435 ae78eeeb5910588c700c65735fc03349 372 PANTHER PTHR11063:SF6 7 372 1.4E-115 T 22-04-2016 SCD_RS10435 ae78eeeb5910588c700c65735fc03349 372 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 262 36.057 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SCD_RS10435 ae78eeeb5910588c700c65735fc03349 372 Pfam PF01472 PUA domain 281 355 1.2E-19 T 22-04-2016 IPR002478 PUA domain GO:0003723 SCD_RS10435 ae78eeeb5910588c700c65735fc03349 372 ProSitePatterns PS00902 Glutamate 5-kinase signature. 211 228 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SCD_RS10435 ae78eeeb5910588c700c65735fc03349 372 Gene3D G3DSA:3.40.1160.10 6 262 4.3E-59 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SCD_RS10435 ae78eeeb5910588c700c65735fc03349 372 SMART SM00359 281 364 1.4E-15 T 22-04-2016 IPR002478 PUA domain GO:0003723 SCD_RS10435 ae78eeeb5910588c700c65735fc03349 372 Gene3D G3DSA:2.30.130.10 279 370 2.5E-25 T 22-04-2016 IPR015947 PUA-like domain SCD_RS10435 ae78eeeb5910588c700c65735fc03349 372 TIGRFAM TIGR01027 proB: glutamate 5-kinase 9 370 1.6E-130 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SCD_RS10435 ae78eeeb5910588c700c65735fc03349 372 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 2.2E-50 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SCD_RS10435 ae78eeeb5910588c700c65735fc03349 372 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 2.2E-50 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SCD_RS10435 ae78eeeb5910588c700c65735fc03349 372 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 2.2E-50 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SCD_RS10435 ae78eeeb5910588c700c65735fc03349 372 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 2.2E-50 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SCD_RS10435 ae78eeeb5910588c700c65735fc03349 372 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 2.2E-50 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SCD_RS10435 ae78eeeb5910588c700c65735fc03349 372 Pfam PF00696 Amino acid kinase family 9 237 6.1E-44 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SCD_RS02085 d518b34428ae3af6f7927057f706894a 226 PANTHER PTHR39327 88 223 3.4E-34 T 22-04-2016 SCD_RS02085 d518b34428ae3af6f7927057f706894a 226 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 79 223 2.8E-20 T 22-04-2016 IPR010319 Transglutaminase-like cysteine peptidase, predicted SCD_RS02085 d518b34428ae3af6f7927057f706894a 226 PANTHER PTHR39327:SF1 88 223 3.4E-34 T 22-04-2016 SCD_RS12295 809218d048f839a71159f5d9c3d267b4 462 Gene3D G3DSA:3.90.190.20 321 455 1.9E-47 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SCD_RS12295 809218d048f839a71159f5d9c3d267b4 462 SUPERFAMILY SSF51984 4 98 9.68E-19 T 22-04-2016 SCD_RS12295 809218d048f839a71159f5d9c3d267b4 462 SUPERFAMILY SSF53623 113 317 2.22E-55 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS12295 809218d048f839a71159f5d9c3d267b4 462 PANTHER PTHR23135 1 460 1.8E-152 T 22-04-2016 SCD_RS12295 809218d048f839a71159f5d9c3d267b4 462 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 458 34.447 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS12295 809218d048f839a71159f5d9c3d267b4 462 PANTHER PTHR23135:SF2 1 460 1.8E-152 T 22-04-2016 SCD_RS12295 809218d048f839a71159f5d9c3d267b4 462 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 456 2.4E-132 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS12295 809218d048f839a71159f5d9c3d267b4 462 Pfam PF02875 Mur ligase family, glutamate ligase domain 321 390 6.9E-7 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SCD_RS12295 809218d048f839a71159f5d9c3d267b4 462 Pfam PF08245 Mur ligase middle domain 121 300 6.6E-34 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS12295 809218d048f839a71159f5d9c3d267b4 462 Gene3D G3DSA:3.40.50.720 5 96 1.7E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS12295 809218d048f839a71159f5d9c3d267b4 462 Gene3D G3DSA:3.40.1190.10 98 319 2.1E-70 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS12295 809218d048f839a71159f5d9c3d267b4 462 SUPERFAMILY SSF53244 319 458 1.42E-43 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SCD_RS12220 29d7c1eed4604f81f834db3bef255fbf 409 SUPERFAMILY SSF56266 16 406 1.96E-141 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 SCD_RS12220 29d7c1eed4604f81f834db3bef255fbf 409 PANTHER PTHR23100 17 409 4.3E-178 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 SCD_RS12220 29d7c1eed4604f81f834db3bef255fbf 409 Gene3D G3DSA:3.60.70.12 12 280 1.6E-99 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 SCD_RS12220 29d7c1eed4604f81f834db3bef255fbf 409 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 16 409 6.0E-126 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 SCD_RS12220 29d7c1eed4604f81f834db3bef255fbf 409 Pfam PF01960 ArgJ family 23 409 6.9E-147 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 SCD_RS12220 29d7c1eed4604f81f834db3bef255fbf 409 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 409 161.71 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 SCD_RS12220 29d7c1eed4604f81f834db3bef255fbf 409 PANTHER PTHR23100:SF0 17 409 4.3E-178 T 22-04-2016 SCD_RS12220 29d7c1eed4604f81f834db3bef255fbf 409 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 24 407 2.0E-161 T 22-04-2016 SCD_RS07735 d4f285e331cd47f501f07814296dd854 130 SUPERFAMILY SSF51735 4 86 4.49E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS07735 d4f285e331cd47f501f07814296dd854 130 Gene3D G3DSA:3.40.50.720 1 90 2.7E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS07735 d4f285e331cd47f501f07814296dd854 130 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 11 89 3.6E-5 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 SCD_RS12985 a189930fd9a2edf6876b72deba41f920 575 PANTHER PTHR23083 69 74 3.7E-50 T 22-04-2016 SCD_RS12985 a189930fd9a2edf6876b72deba41f920 575 PANTHER PTHR23083 114 564 3.7E-50 T 22-04-2016 SCD_RS12985 a189930fd9a2edf6876b72deba41f920 575 Pfam PF07721 Tetratricopeptide repeat 358 381 0.034 T 22-04-2016 IPR011717 Tetratricopeptide TPR-4 GO:0042802 UniPathway: UPA00694 SCD_RS12985 a189930fd9a2edf6876b72deba41f920 575 Pfam PF13432 Tetratricopeptide repeat 125 182 1.8E-4 T 22-04-2016 SCD_RS12985 a189930fd9a2edf6876b72deba41f920 575 Pfam PF13432 Tetratricopeptide repeat 294 349 2.0E-9 T 22-04-2016 SCD_RS12985 a189930fd9a2edf6876b72deba41f920 575 SMART SM00028 356 389 46.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS12985 a189930fd9a2edf6876b72deba41f920 575 SMART SM00028 288 321 1.7 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS12985 a189930fd9a2edf6876b72deba41f920 575 SMART SM00028 459 493 10.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS12985 a189930fd9a2edf6876b72deba41f920 575 SMART SM00028 187 220 21.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS12985 a189930fd9a2edf6876b72deba41f920 575 SMART SM00028 527 560 0.11 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS12985 a189930fd9a2edf6876b72deba41f920 575 SMART SM00028 391 424 99.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS12985 a189930fd9a2edf6876b72deba41f920 575 SMART SM00028 425 458 200.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS12985 a189930fd9a2edf6876b72deba41f920 575 SUPERFAMILY SSF81901 91 295 2.88E-12 T 22-04-2016 SCD_RS12985 a189930fd9a2edf6876b72deba41f920 575 SUPERFAMILY SSF48452 230 383 6.88E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS12985 a189930fd9a2edf6876b72deba41f920 575 Pfam PF14559 Tetratricopeptide repeat 230 291 7.7E-10 T 22-04-2016 SCD_RS12985 a189930fd9a2edf6876b72deba41f920 575 SUPERFAMILY SSF48452 393 562 5.56E-28 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS12985 a189930fd9a2edf6876b72deba41f920 575 Pfam PF13424 Tetratricopeptide repeat 458 523 2.8E-7 T 22-04-2016 SCD_RS12985 a189930fd9a2edf6876b72deba41f920 575 Gene3D G3DSA:1.25.40.10 289 552 1.9E-43 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS12985 a189930fd9a2edf6876b72deba41f920 575 Gene3D G3DSA:1.25.40.10 81 288 7.9E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS12985 a189930fd9a2edf6876b72deba41f920 575 Pfam PF13374 Tetratricopeptide repeat 528 554 0.0034 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS14860 f15093719235ecb32ea15b7cf786b6e0 238 SMART SM00382 46 235 4.7E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS14860 f15093719235ecb32ea15b7cf786b6e0 238 SUPERFAMILY SSF52540 17 238 3.8E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14860 f15093719235ecb32ea15b7cf786b6e0 238 Gene3D G3DSA:3.40.50.300 17 238 4.7E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14860 f15093719235ecb32ea15b7cf786b6e0 238 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS14860 f15093719235ecb32ea15b7cf786b6e0 238 Pfam PF00005 ABC transporter 37 187 1.7E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS14860 f15093719235ecb32ea15b7cf786b6e0 238 PANTHER PTHR24220 19 238 5.5E-101 T 22-04-2016 SCD_RS14860 f15093719235ecb32ea15b7cf786b6e0 238 PANTHER PTHR24220:SF86 19 238 5.5E-101 T 22-04-2016 SCD_RS08035 0925f412a3fdf50ea4d65afda64aada1 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 136 9.8E-9 T 22-04-2016 IPR001451 Hexapeptide repeat SCD_RS08035 0925f412a3fdf50ea4d65afda64aada1 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 33 2.3E-4 T 22-04-2016 IPR001451 Hexapeptide repeat SCD_RS08035 0925f412a3fdf50ea4d65afda64aada1 256 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 174 255 6.0E-29 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SCD_RS08035 0925f412a3fdf50ea4d65afda64aada1 256 PANTHER PTHR23416 1 248 2.0E-125 T 22-04-2016 SCD_RS08035 0925f412a3fdf50ea4d65afda64aada1 256 PANTHER PTHR23416:SF8 1 248 2.0E-125 T 22-04-2016 SCD_RS08035 0925f412a3fdf50ea4d65afda64aada1 256 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 256 44.852 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SCD_RS08035 0925f412a3fdf50ea4d65afda64aada1 256 Gene3D G3DSA:2.160.10.10 1 188 5.7E-50 T 22-04-2016 SCD_RS08035 0925f412a3fdf50ea4d65afda64aada1 256 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 2 254 3.8E-103 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SCD_RS08035 0925f412a3fdf50ea4d65afda64aada1 256 SUPERFAMILY SSF51161 1 256 1.41E-79 T 22-04-2016 IPR011004 Trimeric LpxA-like SCD_RS08035 0925f412a3fdf50ea4d65afda64aada1 256 Gene3D G3DSA:1.20.1180.10 191 256 2.7E-25 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SCD_RS08035 0925f412a3fdf50ea4d65afda64aada1 256 PIRSF PIRSF000456 1 256 6.6E-103 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SCD_RS13095 8fdd154a2441c8b4cf543dd4587daa6e 250 PANTHER PTHR10422 21 165 2.3E-74 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS13095 8fdd154a2441c8b4cf543dd4587daa6e 250 Gene3D G3DSA:1.10.760.10 14 174 2.7E-34 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS13095 8fdd154a2441c8b4cf543dd4587daa6e 250 Gene3D G3DSA:1.10.760.10 206 233 2.7E-34 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS13095 8fdd154a2441c8b4cf543dd4587daa6e 250 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 6 242 1.5E-92 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO SCD_RS13095 8fdd154a2441c8b4cf543dd4587daa6e 250 SUPERFAMILY SSF46626 209 230 5.43E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS13095 8fdd154a2441c8b4cf543dd4587daa6e 250 SUPERFAMILY SSF46626 13 160 5.43E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS13095 8fdd154a2441c8b4cf543dd4587daa6e 250 PANTHER PTHR10422:SF23 21 165 2.3E-74 T 22-04-2016 SCD_RS13095 8fdd154a2441c8b4cf543dd4587daa6e 250 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 3 236 2.1E-93 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO SCD_RS02450 dd21efd2d6331b7c992d9c5f4b63ec53 335 Gene3D G3DSA:1.10.530.10 212 330 2.4E-56 T 22-04-2016 SCD_RS02450 dd21efd2d6331b7c992d9c5f4b63ec53 335 Gene3D G3DSA:1.10.530.10 77 130 2.4E-56 T 22-04-2016 SCD_RS02450 dd21efd2d6331b7c992d9c5f4b63ec53 335 PANTHER PTHR30163:SF0 19 331 6.2E-122 T 22-04-2016 SCD_RS02450 dd21efd2d6331b7c992d9c5f4b63ec53 335 PANTHER PTHR30163 19 331 6.2E-122 T 22-04-2016 IPR011757 Lytic transglycosylase MltB SCD_RS02450 dd21efd2d6331b7c992d9c5f4b63ec53 335 Pfam PF13406 Transglycosylase SLT domain 30 324 1.8E-97 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 SCD_RS02450 dd21efd2d6331b7c992d9c5f4b63ec53 335 SUPERFAMILY SSF53955 20 329 2.44E-87 T 22-04-2016 IPR023346 Lysozyme-like domain SCD_RS02450 dd21efd2d6331b7c992d9c5f4b63ec53 335 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 34 326 3.4E-108 T 22-04-2016 IPR011757 Lytic transglycosylase MltB SCD_RS01090 82d43d3337f27d566094035c40e3f3d1 687 SMART SM00086 207 249 9.7E-4 T 22-04-2016 IPR001610 PAC motif SCD_RS01090 82d43d3337f27d566094035c40e3f3d1 687 SMART SM00052 431 677 2.6E-124 T 22-04-2016 IPR001633 EAL domain SCD_RS01090 82d43d3337f27d566094035c40e3f3d1 687 SUPERFAMILY SSF141868 436 682 7.32E-94 T 22-04-2016 IPR001633 EAL domain SCD_RS01090 82d43d3337f27d566094035c40e3f3d1 687 PANTHER PTHR10799 191 531 2.4E-94 T 22-04-2016 SCD_RS01090 82d43d3337f27d566094035c40e3f3d1 687 Pfam PF00072 Response regulator receiver domain 10 121 1.1E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS01090 82d43d3337f27d566094035c40e3f3d1 687 Pfam PF00563 EAL domain 437 672 1.1E-74 T 22-04-2016 IPR001633 EAL domain SCD_RS01090 82d43d3337f27d566094035c40e3f3d1 687 SMART SM00091 135 201 3.5E-6 T 22-04-2016 IPR000014 PAS domain SCD_RS01090 82d43d3337f27d566094035c40e3f3d1 687 Gene3D G3DSA:3.40.50.2300 3 132 6.9E-40 T 22-04-2016 SCD_RS01090 82d43d3337f27d566094035c40e3f3d1 687 Gene3D G3DSA:3.30.450.20 146 248 1.3E-25 T 22-04-2016 SCD_RS01090 82d43d3337f27d566094035c40e3f3d1 687 Gene3D G3DSA:3.30.70.270 261 427 3.9E-60 T 22-04-2016 SCD_RS01090 82d43d3337f27d566094035c40e3f3d1 687 PANTHER PTHR10799:SF774 191 531 2.4E-94 T 22-04-2016 SCD_RS01090 82d43d3337f27d566094035c40e3f3d1 687 SUPERFAMILY SSF55785 146 257 6.81E-27 T 22-04-2016 IPR000014 PAS domain SCD_RS01090 82d43d3337f27d566094035c40e3f3d1 687 Pfam PF00990 Diguanylate cyclase, GGDEF domain 260 417 1.0E-50 T 22-04-2016 IPR000160 GGDEF domain SCD_RS01090 82d43d3337f27d566094035c40e3f3d1 687 SUPERFAMILY SSF55073 265 423 1.1E-51 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS01090 82d43d3337f27d566094035c40e3f3d1 687 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 139 255 1.8E-19 T 22-04-2016 IPR000014 PAS domain SCD_RS01090 82d43d3337f27d566094035c40e3f3d1 687 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 259 419 2.0E-45 T 22-04-2016 IPR000160 GGDEF domain SCD_RS01090 82d43d3337f27d566094035c40e3f3d1 687 Pfam PF13426 PAS domain 146 248 1.1E-17 T 22-04-2016 IPR000014 PAS domain SCD_RS01090 82d43d3337f27d566094035c40e3f3d1 687 Gene3D G3DSA:3.20.20.450 435 682 9.8E-103 T 22-04-2016 IPR001633 EAL domain SCD_RS01090 82d43d3337f27d566094035c40e3f3d1 687 SMART SM00448 8 121 5.5E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS01090 82d43d3337f27d566094035c40e3f3d1 687 SUPERFAMILY SSF52172 7 143 5.41E-37 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS01090 82d43d3337f27d566094035c40e3f3d1 687 SMART SM00267 249 421 1.3E-65 T 22-04-2016 IPR000160 GGDEF domain SCD_RS07135 efae464ddb6e8856160298cd598e0b93 312 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS07135 efae464ddb6e8856160298cd598e0b93 312 SMART SM00382 30 212 1.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS07135 efae464ddb6e8856160298cd598e0b93 312 SUPERFAMILY SSF52540 5 224 1.04E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07135 efae464ddb6e8856160298cd598e0b93 312 PANTHER PTHR24220 251 309 3.6E-108 T 22-04-2016 SCD_RS07135 efae464ddb6e8856160298cd598e0b93 312 PANTHER PTHR24220 7 227 3.6E-108 T 22-04-2016 SCD_RS07135 efae464ddb6e8856160298cd598e0b93 312 PANTHER PTHR24220:SF0 251 309 3.6E-108 T 22-04-2016 SCD_RS07135 efae464ddb6e8856160298cd598e0b93 312 PANTHER PTHR24220:SF0 7 227 3.6E-108 T 22-04-2016 SCD_RS07135 efae464ddb6e8856160298cd598e0b93 312 Gene3D G3DSA:3.40.50.300 2 224 5.7E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07135 efae464ddb6e8856160298cd598e0b93 312 Pfam PF00005 ABC transporter 23 165 2.3E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS07760 f77b025740af40d0b0f753600ed6e668 778 Pfam PF12729 Four helix bundle sensory module for signal transduction 8 181 4.3E-13 T 22-04-2016 IPR024478 4HB MCP domain SCD_RS07760 f77b025740af40d0b0f753600ed6e668 778 PANTHER PTHR33121 162 173 9.6E-46 T 22-04-2016 SCD_RS07760 f77b025740af40d0b0f753600ed6e668 778 PANTHER PTHR33121 476 777 9.6E-46 T 22-04-2016 SCD_RS07760 f77b025740af40d0b0f753600ed6e668 778 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 227 348 2.2E-10 T 22-04-2016 IPR000014 PAS domain SCD_RS07760 f77b025740af40d0b0f753600ed6e668 778 SUPERFAMILY SSF55785 213 340 7.33E-19 T 22-04-2016 IPR000014 PAS domain SCD_RS07760 f77b025740af40d0b0f753600ed6e668 778 Pfam PF00563 EAL domain 533 773 3.5E-63 T 22-04-2016 IPR001633 EAL domain SCD_RS07760 f77b025740af40d0b0f753600ed6e668 778 PANTHER PTHR33121:SF10 162 173 9.6E-46 T 22-04-2016 SCD_RS07760 f77b025740af40d0b0f753600ed6e668 778 PANTHER PTHR33121:SF10 476 777 9.6E-46 T 22-04-2016 SCD_RS07760 f77b025740af40d0b0f753600ed6e668 778 SUPERFAMILY SSF141868 533 775 2.88E-70 T 22-04-2016 IPR001633 EAL domain SCD_RS07760 f77b025740af40d0b0f753600ed6e668 778 Pfam PF00989 PAS fold 226 339 4.7E-11 T 22-04-2016 IPR013767 PAS fold GO:0006355 SCD_RS07760 f77b025740af40d0b0f753600ed6e668 778 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 349 513 6.2E-42 T 22-04-2016 IPR000160 GGDEF domain SCD_RS07760 f77b025740af40d0b0f753600ed6e668 778 SMART SM00052 526 778 4.7E-65 T 22-04-2016 IPR001633 EAL domain SCD_RS07760 f77b025740af40d0b0f753600ed6e668 778 SUPERFAMILY SSF55073 358 516 1.1E-44 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS07760 f77b025740af40d0b0f753600ed6e668 778 SMART SM00091 223 289 7.8E-6 T 22-04-2016 IPR000014 PAS domain SCD_RS07760 f77b025740af40d0b0f753600ed6e668 778 Pfam PF00990 Diguanylate cyclase, GGDEF domain 353 510 4.6E-42 T 22-04-2016 IPR000160 GGDEF domain SCD_RS07760 f77b025740af40d0b0f753600ed6e668 778 Gene3D G3DSA:3.30.450.20 219 340 2.6E-17 T 22-04-2016 SCD_RS07760 f77b025740af40d0b0f753600ed6e668 778 Gene3D G3DSA:3.20.20.450 530 776 1.2E-73 T 22-04-2016 IPR001633 EAL domain SCD_RS07760 f77b025740af40d0b0f753600ed6e668 778 Gene3D G3DSA:3.30.70.270 355 517 3.1E-50 T 22-04-2016 SCD_RS07760 f77b025740af40d0b0f753600ed6e668 778 SMART SM00267 342 514 2.0E-52 T 22-04-2016 IPR000160 GGDEF domain SCD_RS00130 ebc7ae64a8e4cb5371fef3045a90ecaa 437 Pfam PF00155 Aminotransferase class I and II 42 385 1.9E-48 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SCD_RS00130 ebc7ae64a8e4cb5371fef3045a90ecaa 437 Gene3D G3DSA:3.90.1150.10 246 387 3.0E-24 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS00130 ebc7ae64a8e4cb5371fef3045a90ecaa 437 PANTHER PTHR11751:SF306 23 388 7.0E-79 T 22-04-2016 SCD_RS00130 ebc7ae64a8e4cb5371fef3045a90ecaa 437 SUPERFAMILY SSF53383 20 387 4.3E-79 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS00130 ebc7ae64a8e4cb5371fef3045a90ecaa 437 Gene3D G3DSA:3.40.640.10 55 245 7.5E-46 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS00130 ebc7ae64a8e4cb5371fef3045a90ecaa 437 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 238 251 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 SCD_RS00130 ebc7ae64a8e4cb5371fef3045a90ecaa 437 PANTHER PTHR11751 23 388 7.0E-79 T 22-04-2016 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 SUPERFAMILY SSF81653 119 227 1.83E-26 T 22-04-2016 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 SUPERFAMILY SSF81665 660 882 1.7E-120 T 22-04-2016 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 SUPERFAMILY SSF81665 229 322 1.7E-120 T 22-04-2016 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 SUPERFAMILY SSF81665 2 120 1.7E-120 T 22-04-2016 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 PANTHER PTHR24093 1 746 0.0 T 22-04-2016 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 PANTHER PTHR24093 772 886 0.0 T 22-04-2016 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 PANTHER PTHR24093:SF268 1 746 0.0 T 22-04-2016 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 PANTHER PTHR24093:SF268 772 886 0.0 T 22-04-2016 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 Pfam PF00689 Cation transporting ATPase, C-terminus 694 879 5.0E-45 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 584 697 3.0E-32 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 210 349 1.6E-26 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 Gene3D G3DSA:2.70.150.10 20 54 6.2E-38 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 Gene3D G3DSA:2.70.150.10 115 227 6.2E-38 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 Pfam PF00122 E1-E2 ATPase 88 319 2.5E-64 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 Pfam PF00702 haloacid dehalogenase-like hydrolase 326 624 2.0E-20 T 22-04-2016 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 SUPERFAMILY SSF81660 335 510 4.25E-40 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 330 336 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 SUPERFAMILY SSF56784 326 346 9.56E-61 T 22-04-2016 IPR023214 HAD-like domain SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 SUPERFAMILY SSF56784 464 714 9.56E-61 T 22-04-2016 IPR023214 HAD-like domain SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 Gene3D G3DSA:3.40.1110.10 319 513 1.9E-49 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 SMART SM00831 2 75 1.6E-18 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 Pfam PF00690 Cation transporter/ATPase, N-terminus 4 70 6.4E-17 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 634 646 2.2E-39 T 22-04-2016 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 610 629 2.2E-39 T 22-04-2016 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 167 181 2.2E-39 T 22-04-2016 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 506 517 2.2E-39 T 22-04-2016 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 328 342 2.2E-39 T 22-04-2016 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 528 538 2.2E-39 T 22-04-2016 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 62 76 1.1E-16 T 22-04-2016 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 248 270 1.1E-16 T 22-04-2016 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 321 342 1.1E-16 T 22-04-2016 SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 Gene3D G3DSA:1.20.1110.10 55 114 3.7E-96 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain SCD_RS04275 3073d3753c82fc07a52021d49c18ba35 887 Gene3D G3DSA:1.20.1110.10 579 882 3.7E-96 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain SCD_RS14085 5f1b3a66c9b305adde2f356c5c07c102 354 PIRSF PIRSF001359 1 329 4.7E-86 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SCD_RS14085 5f1b3a66c9b305adde2f356c5c07c102 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SCD_RS14085 5f1b3a66c9b305adde2f356c5c07c102 354 Gene3D G3DSA:3.20.20.70 1 335 2.3E-110 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS14085 5f1b3a66c9b305adde2f356c5c07c102 354 SUPERFAMILY SSF51569 1 329 1.61E-107 T 22-04-2016 SCD_RS14085 5f1b3a66c9b305adde2f356c5c07c102 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SCD_RS14085 5f1b3a66c9b305adde2f356c5c07c102 354 PANTHER PTHR30304 1 349 1.1E-120 T 22-04-2016 SCD_RS14085 5f1b3a66c9b305adde2f356c5c07c102 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 1.3E-102 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SCD_RS14085 5f1b3a66c9b305adde2f356c5c07c102 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 1.8E-193 T 22-04-2016 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 SCD_RS14085 5f1b3a66c9b305adde2f356c5c07c102 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 328 3.1E-96 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SCD_RS00255 1b7ea7ddef930859dbdc815506def1f0 82 Pfam PF02597 ThiS family 5 78 1.8E-10 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 SCD_RS00255 1b7ea7ddef930859dbdc815506def1f0 82 SUPERFAMILY SSF54285 1 78 3.18E-15 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SCD_RS00255 1b7ea7ddef930859dbdc815506def1f0 82 Gene3D G3DSA:3.10.20.30 1 78 8.0E-16 T 22-04-2016 IPR012675 Beta-grasp domain SCD_RS13430 f863ebad1d859ea965bf32d61e335fb1 135 Gene3D G3DSA:3.40.1260.10 18 135 4.1E-50 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS13430 f863ebad1d859ea965bf32d61e335fb1 135 PANTHER PTHR38780 18 135 2.1E-31 T 22-04-2016 SCD_RS13430 f863ebad1d859ea965bf32d61e335fb1 135 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 20 135 4.6E-42 T 22-04-2016 IPR017462 Sulphur relay, TusC/DsrF SCD_RS13430 f863ebad1d859ea965bf32d61e335fb1 135 Pfam PF02635 DsrE/DsrF-like family 19 135 4.1E-30 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein SCD_RS13430 f863ebad1d859ea965bf32d61e335fb1 135 PANTHER PTHR38780:SF1 18 135 2.1E-31 T 22-04-2016 SCD_RS13430 f863ebad1d859ea965bf32d61e335fb1 135 SUPERFAMILY SSF75169 18 135 4.84E-41 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 SMART SM00863 169 218 2.2E-24 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 SUPERFAMILY SSF52954 528 633 1.15E-30 T 22-04-2016 IPR004154 Anticodon-binding SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 Pfam PF02824 TGS domain 5 61 3.2E-9 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 7.2E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 7.2E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 7.2E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 7.2E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 7.2E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 317 528 1.8E-45 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 PANTHER PTHR11451:SF31 1 634 0.0 T 22-04-2016 SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 170 218 5.4E-14 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 PANTHER PTHR11451 1 634 0.0 T 22-04-2016 SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 Gene3D G3DSA:3.30.980.10 66 129 2.9E-41 T 22-04-2016 SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 Gene3D G3DSA:3.30.980.10 187 223 2.9E-41 T 22-04-2016 SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 Gene3D G3DSA:3.30.54.20 131 186 1.2E-22 T 22-04-2016 SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 Gene3D G3DSA:3.30.930.10 241 529 1.9E-121 T 22-04-2016 SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 SUPERFAMILY SSF55681 242 525 2.68E-97 T 22-04-2016 SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 Gene3D G3DSA:3.40.50.800 530 634 2.9E-35 T 22-04-2016 IPR004154 Anticodon-binding SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 630 1.9E-224 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 SUPERFAMILY SSF81271 3 61 8.17E-15 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 Gene3D G3DSA:3.10.20.30 1 64 6.0E-21 T 22-04-2016 IPR012675 Beta-grasp domain SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 34.159 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 SUPERFAMILY SSF55186 64 240 5.76E-66 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 SCD_RS05490 b9e7a505ef5fe6d7ab80cf8f73a46f9f 638 Pfam PF03129 Anticodon binding domain 540 628 5.1E-20 T 22-04-2016 IPR004154 Anticodon-binding SCD_RS08975 8a22e95cdf4fd8257d0c7d22d0cb876a 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 22-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS08975 8a22e95cdf4fd8257d0c7d22d0cb876a 141 SMART SM00562 3 140 1.8E-84 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS08975 8a22e95cdf4fd8257d0c7d22d0cb876a 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.931 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS08975 8a22e95cdf4fd8257d0c7d22d0cb876a 141 SUPERFAMILY SSF54919 1 139 1.7E-57 T 22-04-2016 SCD_RS08975 8a22e95cdf4fd8257d0c7d22d0cb876a 141 Pfam PF00334 Nucleoside diphosphate kinase 4 137 1.5E-55 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS08975 8a22e95cdf4fd8257d0c7d22d0cb876a 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 5.6E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS08975 8a22e95cdf4fd8257d0c7d22d0cb876a 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 5.6E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS08975 8a22e95cdf4fd8257d0c7d22d0cb876a 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 5.6E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS08975 8a22e95cdf4fd8257d0c7d22d0cb876a 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 5.6E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS08975 8a22e95cdf4fd8257d0c7d22d0cb876a 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 5.6E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS08975 8a22e95cdf4fd8257d0c7d22d0cb876a 141 Gene3D G3DSA:3.30.70.141 1 139 1.2E-58 T 22-04-2016 SCD_RS08975 8a22e95cdf4fd8257d0c7d22d0cb876a 141 PANTHER PTHR11349 1 140 2.5E-67 T 22-04-2016 SCD_RS08490 cf6dca8c02cbce7b3d0fbe99fcad0e2a 124 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 97 3.0E-32 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SCD_RS08490 cf6dca8c02cbce7b3d0fbe99fcad0e2a 124 Gene3D G3DSA:3.30.300.20 6 118 1.8E-41 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SCD_RS08490 cf6dca8c02cbce7b3d0fbe99fcad0e2a 124 SUPERFAMILY SSF89919 4 112 6.28E-36 T 22-04-2016 IPR023799 Ribosome-binding factor A domain SCD_RS08490 cf6dca8c02cbce7b3d0fbe99fcad0e2a 124 Pfam PF02033 Ribosome-binding factor A 7 110 1.5E-32 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SCD_RS08490 cf6dca8c02cbce7b3d0fbe99fcad0e2a 124 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 117 22.659 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SCD_RS08490 cf6dca8c02cbce7b3d0fbe99fcad0e2a 124 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 22-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 SCD_RS08490 cf6dca8c02cbce7b3d0fbe99fcad0e2a 124 PANTHER PTHR33515 1 124 6.9E-47 T 22-04-2016 SCD_RS08490 cf6dca8c02cbce7b3d0fbe99fcad0e2a 124 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 6 113 1.9E-34 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SCD_RS07910 00d142d38204107291be0e216cc0514c 643 SMART SM00491 477 611 5.3E-38 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 SCD_RS07910 00d142d38204107291be0e216cc0514c 643 SUPERFAMILY SSF52540 581 596 5.65E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07910 00d142d38204107291be0e216cc0514c 643 SUPERFAMILY SSF52540 391 550 5.65E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07910 00d142d38204107291be0e216cc0514c 643 SUPERFAMILY SSF52540 188 231 5.65E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07910 00d142d38204107291be0e216cc0514c 643 Gene3D G3DSA:3.40.50.300 17 119 1.0E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07910 00d142d38204107291be0e216cc0514c 643 Gene3D G3DSA:3.40.50.300 191 256 1.0E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07910 00d142d38204107291be0e216cc0514c 643 Gene3D G3DSA:3.40.50.300 393 403 1.0E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07910 00d142d38204107291be0e216cc0514c 643 SUPERFAMILY SSF52540 570 607 2.15E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07910 00d142d38204107291be0e216cc0514c 643 SUPERFAMILY SSF52540 188 245 2.15E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07910 00d142d38204107291be0e216cc0514c 643 SUPERFAMILY SSF52540 20 111 2.15E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07910 00d142d38204107291be0e216cc0514c 643 PANTHER PTHR11472 5 629 3.4E-174 T 22-04-2016 SCD_RS07910 00d142d38204107291be0e216cc0514c 643 Pfam PF13307 Helicase C-terminal domain 462 624 7.8E-36 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 SCD_RS07910 00d142d38204107291be0e216cc0514c 643 Gene3D G3DSA:3.40.50.300 466 608 1.7E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07910 00d142d38204107291be0e216cc0514c 643 PANTHER PTHR11472:SF37 5 629 3.4E-174 T 22-04-2016 SCD_RS14225 aab8639997d2f21b224ae024c16a7a90 250 Pfam PF00535 Glycosyl transferase family 2 4 125 1.9E-23 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SCD_RS14225 aab8639997d2f21b224ae024c16a7a90 250 Gene3D G3DSA:3.90.550.10 1 224 9.3E-42 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS14225 aab8639997d2f21b224ae024c16a7a90 250 PANTHER PTHR22916 1 205 1.7E-64 T 22-04-2016 SCD_RS14225 aab8639997d2f21b224ae024c16a7a90 250 SUPERFAMILY SSF53448 3 211 3.26E-45 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS14225 aab8639997d2f21b224ae024c16a7a90 250 PANTHER PTHR22916:SF4 1 205 1.7E-64 T 22-04-2016 SCD_RS12670 d2a682a42d4511880f70abf6da619e13 256 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 5 253 8.6E-84 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SCD_RS12670 d2a682a42d4511880f70abf6da619e13 256 SUPERFAMILY SSF53335 3 255 9.43E-75 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS12670 d2a682a42d4511880f70abf6da619e13 256 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 4 255 56.971 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SCD_RS12670 d2a682a42d4511880f70abf6da619e13 256 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 36 63 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 SCD_RS12670 d2a682a42d4511880f70abf6da619e13 256 Gene3D G3DSA:3.40.50.150 2 187 2.4E-69 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS12670 d2a682a42d4511880f70abf6da619e13 256 PANTHER PTHR11727 1 252 2.0E-85 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SCD_RS12670 d2a682a42d4511880f70abf6da619e13 256 Pfam PF00398 Ribosomal RNA adenine dimethylase 4 255 2.3E-62 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SCD_RS12670 d2a682a42d4511880f70abf6da619e13 256 SMART SM00650 20 188 3.3E-77 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 SCD_RS12670 d2a682a42d4511880f70abf6da619e13 256 Gene3D G3DSA:1.10.8.100 191 255 4.5E-25 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like SCD_RS04150 903499b0d76e4f8eb179a12a86b81887 180 SUPERFAMILY SSF158710 25 168 9.68E-50 T 22-04-2016 SCD_RS04150 903499b0d76e4f8eb179a12a86b81887 180 PANTHER PTHR38101:SF1 10 180 4.0E-56 T 22-04-2016 SCD_RS04150 903499b0d76e4f8eb179a12a86b81887 180 PIRSF PIRSF016183 3 173 2.9E-62 T 22-04-2016 IPR006839 Ribosome-associated, YjgA SCD_RS04150 903499b0d76e4f8eb179a12a86b81887 180 Gene3D G3DSA:1.10.60.30 25 97 9.7E-31 T 22-04-2016 IPR023153 PSPTO4464-like domain SCD_RS04150 903499b0d76e4f8eb179a12a86b81887 180 Gene3D G3DSA:1.10.60.30 102 172 1.2E-26 T 22-04-2016 IPR023153 PSPTO4464-like domain SCD_RS04150 903499b0d76e4f8eb179a12a86b81887 180 PANTHER PTHR38101 10 180 4.0E-56 T 22-04-2016 SCD_RS04150 903499b0d76e4f8eb179a12a86b81887 180 Pfam PF04751 Protein of unknown function (DUF615) 15 165 1.8E-53 T 22-04-2016 IPR006839 Ribosome-associated, YjgA SCD_RS04150 903499b0d76e4f8eb179a12a86b81887 180 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 7 169 21.56 T 22-04-2016 IPR006839 Ribosome-associated, YjgA SCD_RS10430 8e4b3a111ee308d9deba4594d5260b1a 351 Pfam PF01018 GTP1/OBG 3 158 1.2E-59 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SCD_RS10430 8e4b3a111ee308d9deba4594d5260b1a 351 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 8.7E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS10430 8e4b3a111ee308d9deba4594d5260b1a 351 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 8.7E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS10430 8e4b3a111ee308d9deba4594d5260b1a 351 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 8.7E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS10430 8e4b3a111ee308d9deba4594d5260b1a 351 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 8.7E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS10430 8e4b3a111ee308d9deba4594d5260b1a 351 PIRSF PIRSF002401 1 351 1.7E-136 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SCD_RS10430 8e4b3a111ee308d9deba4594d5260b1a 351 PANTHER PTHR11702:SF3 1 348 1.2E-163 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SCD_RS10430 8e4b3a111ee308d9deba4594d5260b1a 351 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 333 2.7E-145 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SCD_RS10430 8e4b3a111ee308d9deba4594d5260b1a 351 Gene3D G3DSA:2.70.210.12 2 155 5.8E-58 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SCD_RS10430 8e4b3a111ee308d9deba4594d5260b1a 351 PANTHER PTHR11702 1 348 1.2E-163 T 22-04-2016 SCD_RS10430 8e4b3a111ee308d9deba4594d5260b1a 351 SUPERFAMILY SSF82051 2 158 2.49E-56 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SCD_RS10430 8e4b3a111ee308d9deba4594d5260b1a 351 SUPERFAMILY SSF52540 151 340 3.31E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS10430 8e4b3a111ee308d9deba4594d5260b1a 351 Gene3D G3DSA:3.40.50.300 156 347 5.7E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS10430 8e4b3a111ee308d9deba4594d5260b1a 351 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 SCD_RS10430 8e4b3a111ee308d9deba4594d5260b1a 351 Pfam PF01926 50S ribosome-binding GTPase 161 285 8.3E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS10430 8e4b3a111ee308d9deba4594d5260b1a 351 Hamap MF_01454 GTPase Obg [obg]. 2 334 47.53 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SCD_RS07565 b60795dc2ca39c690b77de0f61b617db 336 Pfam PF02618 YceG-like family 39 324 3.9E-83 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like SCD_RS07565 b60795dc2ca39c690b77de0f61b617db 336 PANTHER PTHR30518 1 336 3.0E-88 T 22-04-2016 SCD_RS07565 b60795dc2ca39c690b77de0f61b617db 336 Gene3D G3DSA:3.30.160.60 299 333 1.2E-17 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 SCD_RS07565 b60795dc2ca39c690b77de0f61b617db 336 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 10 332 1.2E-88 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like SCD_RS07565 b60795dc2ca39c690b77de0f61b617db 336 PANTHER PTHR30518:SF2 1 336 3.0E-88 T 22-04-2016 SCD_RS11210 eedca43ec36155669b78f9a2314546ca 734 Pfam PF01568 Molydopterin dinucleotide binding domain 608 710 4.3E-24 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SCD_RS11210 eedca43ec36155669b78f9a2314546ca 734 Gene3D G3DSA:2.20.25.90 21 73 3.8E-12 T 22-04-2016 SCD_RS11210 eedca43ec36155669b78f9a2314546ca 734 Pfam PF00384 Molybdopterin oxidoreductase 79 506 1.7E-83 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SCD_RS11210 eedca43ec36155669b78f9a2314546ca 734 PANTHER PTHR11615:SF119 20 732 3.7E-180 T 22-04-2016 SCD_RS11210 eedca43ec36155669b78f9a2314546ca 734 SUPERFAMILY SSF53706 20 609 6.81E-176 T 22-04-2016 SCD_RS11210 eedca43ec36155669b78f9a2314546ca 734 PANTHER PTHR11615 20 732 3.7E-180 T 22-04-2016 SCD_RS11210 eedca43ec36155669b78f9a2314546ca 734 Gene3D G3DSA:3.40.228.10 155 337 2.6E-65 T 22-04-2016 SCD_RS11210 eedca43ec36155669b78f9a2314546ca 734 SMART SM00926 19 74 1.9E-11 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SCD_RS11210 eedca43ec36155669b78f9a2314546ca 734 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 24 42 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 SCD_RS11210 eedca43ec36155669b78f9a2314546ca 734 Gene3D G3DSA:2.40.40.20 562 718 1.1E-40 T 22-04-2016 SCD_RS11210 eedca43ec36155669b78f9a2314546ca 734 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 21 67 2.3E-9 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SCD_RS11210 eedca43ec36155669b78f9a2314546ca 734 SUPERFAMILY SSF50692 579 717 4.21E-39 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SCD_RS11210 eedca43ec36155669b78f9a2314546ca 734 Gene3D G3DSA:3.40.50.740 338 561 1.0E-83 T 22-04-2016 SCD_RS11210 eedca43ec36155669b78f9a2314546ca 734 Gene3D G3DSA:3.40.50.740 79 154 1.0E-83 T 22-04-2016 SCD_RS07815 4f3c19f1ab0c4e8407b7304c7a575ad2 228 SMART SM00862 149 224 1.1E-31 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SCD_RS07815 4f3c19f1ab0c4e8407b7304c7a575ad2 228 Gene3D G3DSA:3.40.50.2300 2 121 9.4E-35 T 22-04-2016 SCD_RS07815 4f3c19f1ab0c4e8407b7304c7a575ad2 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 3.8E-29 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SCD_RS07815 4f3c19f1ab0c4e8407b7304c7a575ad2 228 PANTHER PTHR26402:SF578 2 227 4.3E-92 T 22-04-2016 SCD_RS07815 4f3c19f1ab0c4e8407b7304c7a575ad2 228 Gene3D G3DSA:1.10.10.10 128 227 2.7E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS07815 4f3c19f1ab0c4e8407b7304c7a575ad2 228 SMART SM00448 2 113 2.3E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS07815 4f3c19f1ab0c4e8407b7304c7a575ad2 228 Pfam PF00072 Response regulator receiver domain 5 114 2.0E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS07815 4f3c19f1ab0c4e8407b7304c7a575ad2 228 PANTHER PTHR26402 2 227 4.3E-92 T 22-04-2016 SCD_RS07815 4f3c19f1ab0c4e8407b7304c7a575ad2 228 SUPERFAMILY SSF52172 1 183 7.23E-36 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS05815 c941a2603305b10c462c1202315ff3f7 306 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 155 1.7E-40 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 SCD_RS05815 c941a2603305b10c462c1202315ff3f7 306 PANTHER PTHR11811 1 301 6.2E-149 T 22-04-2016 SCD_RS05815 c941a2603305b10c462c1202315ff3f7 306 SMART SM01350 170 305 7.9E-6 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SCD_RS05815 c941a2603305b10c462c1202315ff3f7 306 SUPERFAMILY SSF48179 168 302 9.07E-39 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SCD_RS05815 c941a2603305b10c462c1202315ff3f7 306 PANTHER PTHR11811:SF28 1 301 6.2E-149 T 22-04-2016 SCD_RS05815 c941a2603305b10c462c1202315ff3f7 306 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 159 187 5.2E-35 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SCD_RS05815 c941a2603305b10c462c1202315ff3f7 306 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 235 262 5.2E-35 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SCD_RS05815 c941a2603305b10c462c1202315ff3f7 306 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 60 89 5.2E-35 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SCD_RS05815 c941a2603305b10c462c1202315ff3f7 306 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 23 5.2E-35 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SCD_RS05815 c941a2603305b10c462c1202315ff3f7 306 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 113 138 5.2E-35 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SCD_RS05815 c941a2603305b10c462c1202315ff3f7 306 SUPERFAMILY SSF51735 1 157 1.04E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS05815 c941a2603305b10c462c1202315ff3f7 306 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 SCD_RS05815 c941a2603305b10c462c1202315ff3f7 306 Gene3D G3DSA:3.40.50.720 1 171 7.0E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS05815 c941a2603305b10c462c1202315ff3f7 306 Gene3D G3DSA:1.10.1040.10 172 279 2.5E-33 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SCD_RS05815 c941a2603305b10c462c1202315ff3f7 306 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 170 279 2.0E-23 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SCD_RS05815 c941a2603305b10c462c1202315ff3f7 306 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 301 2.8E-113 T 22-04-2016 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 SCD_RS08940 bf125b109d3ae08e3e5791b3c336d0f1 391 PANTHER PTHR32303:SF8 42 381 5.4E-63 T 22-04-2016 SCD_RS08940 bf125b109d3ae08e3e5791b3c336d0f1 391 SMART SM00564 249 280 490.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SCD_RS08940 bf125b109d3ae08e3e5791b3c336d0f1 391 SMART SM00564 198 229 0.16 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SCD_RS08940 bf125b109d3ae08e3e5791b3c336d0f1 391 SMART SM00564 153 184 0.055 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SCD_RS08940 bf125b109d3ae08e3e5791b3c336d0f1 391 SMART SM00564 74 105 84.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SCD_RS08940 bf125b109d3ae08e3e5791b3c336d0f1 391 SMART SM00564 113 144 38.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SCD_RS08940 bf125b109d3ae08e3e5791b3c336d0f1 391 SMART SM00564 286 318 0.031 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SCD_RS08940 bf125b109d3ae08e3e5791b3c336d0f1 391 SMART SM00564 328 359 320.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SCD_RS08940 bf125b109d3ae08e3e5791b3c336d0f1 391 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 7 388 1.7E-135 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB SCD_RS08940 bf125b109d3ae08e3e5791b3c336d0f1 391 SUPERFAMILY SSF50998 39 382 2.49E-77 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SCD_RS08940 bf125b109d3ae08e3e5791b3c336d0f1 391 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 390 37.382 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB SCD_RS08940 bf125b109d3ae08e3e5791b3c336d0f1 391 Pfam PF13360 PQQ-like domain 87 317 1.5E-57 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat SCD_RS08940 bf125b109d3ae08e3e5791b3c336d0f1 391 PANTHER PTHR32303 42 381 5.4E-63 T 22-04-2016 SCD_RS08940 bf125b109d3ae08e3e5791b3c336d0f1 391 Gene3D G3DSA:2.140.10.10 7 389 6.1E-64 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain SCD_RS14575 a99bbbaf2d10a7df1407470604b898b4 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 671 689 9.8E-24 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS14575 a99bbbaf2d10a7df1407470604b898b4 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 453 463 9.8E-24 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS14575 a99bbbaf2d10a7df1407470604b898b4 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 694 708 9.8E-24 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS14575 a99bbbaf2d10a7df1407470604b898b4 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 548 572 9.8E-24 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS14575 a99bbbaf2d10a7df1407470604b898b4 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 583 593 9.8E-24 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS14575 a99bbbaf2d10a7df1407470604b898b4 713 Pfam PF00263 Bacterial type II and III secretion system protein 552 707 9.0E-49 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 SCD_RS14575 a99bbbaf2d10a7df1407470604b898b4 713 PANTHER PTHR30604 100 713 5.4E-106 T 22-04-2016 SCD_RS14575 a99bbbaf2d10a7df1407470604b898b4 713 Pfam PF07660 Secretin and TonB N terminus short domain 315 362 1.4E-8 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SCD_RS14575 a99bbbaf2d10a7df1407470604b898b4 713 SMART SM00965 315 363 6.3E-9 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SCD_RS14575 a99bbbaf2d10a7df1407470604b898b4 713 Pfam PF11741 AMIN domain 65 142 3.4E-7 T 22-04-2016 IPR021731 AMIN domain SCD_RS14575 a99bbbaf2d10a7df1407470604b898b4 713 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 290 707 1.9E-153 T 22-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 SCD_RS14575 a99bbbaf2d10a7df1407470604b898b4 713 Pfam PF03958 Bacterial type II/III secretion system short domain 388 453 1.3E-12 T 22-04-2016 IPR005644 NolW-like SCD_RS08100 369c343165d73313810922ab6ef91fac 142 Gene3D G3DSA:3.40.1260.10 31 142 3.2E-36 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS08100 369c343165d73313810922ab6ef91fac 142 PANTHER PTHR37691:SF1 31 142 4.7E-20 T 22-04-2016 SCD_RS08100 369c343165d73313810922ab6ef91fac 142 PANTHER PTHR37691 31 142 4.7E-20 T 22-04-2016 SCD_RS08100 369c343165d73313810922ab6ef91fac 142 SUPERFAMILY SSF75169 31 142 7.95E-26 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS08100 369c343165d73313810922ab6ef91fac 142 Pfam PF02635 DsrE/DsrF-like family 54 142 1.6E-9 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein SCD_RS09495 cd4bf2bbd947f7808907b3006aefa143 202 SUPERFAMILY SSF52833 44 199 1.39E-46 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS09495 cd4bf2bbd947f7808907b3006aefa143 202 PANTHER PTHR12151 44 200 1.2E-54 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC SCD_RS09495 cd4bf2bbd947f7808907b3006aefa143 202 Pfam PF02630 SCO1/SenC 41 182 7.1E-39 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC SCD_RS09495 cd4bf2bbd947f7808907b3006aefa143 202 Gene3D G3DSA:3.40.30.10 7 200 1.9E-54 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS12785 0e2c8b91c6678e9505dd01dcad0bd8b6 223 SMART SM00448 1 112 4.6E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS12785 0e2c8b91c6678e9505dd01dcad0bd8b6 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 3.9E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SCD_RS12785 0e2c8b91c6678e9505dd01dcad0bd8b6 223 SMART SM00862 146 220 2.6E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SCD_RS12785 0e2c8b91c6678e9505dd01dcad0bd8b6 223 Gene3D G3DSA:3.40.50.2300 1 122 7.4E-38 T 22-04-2016 SCD_RS12785 0e2c8b91c6678e9505dd01dcad0bd8b6 223 PANTHER PTHR26402 1 223 7.8E-86 T 22-04-2016 SCD_RS12785 0e2c8b91c6678e9505dd01dcad0bd8b6 223 SUPERFAMILY SSF52172 1 124 1.11E-38 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS12785 0e2c8b91c6678e9505dd01dcad0bd8b6 223 Gene3D G3DSA:1.10.10.10 125 221 8.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS12785 0e2c8b91c6678e9505dd01dcad0bd8b6 223 Pfam PF00072 Response regulator receiver domain 3 112 9.8E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS12785 0e2c8b91c6678e9505dd01dcad0bd8b6 223 SUPERFAMILY SSF46894 123 220 5.95E-22 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SCD_RS12785 0e2c8b91c6678e9505dd01dcad0bd8b6 223 PANTHER PTHR26402:SF552 1 223 7.8E-86 T 22-04-2016 SCD_RS07965 38e12037434a3b2448e15854ab063e33 114 PANTHER PTHR37485:SF1 2 106 3.3E-33 T 22-04-2016 SCD_RS07965 38e12037434a3b2448e15854ab063e33 114 PANTHER PTHR37485 2 106 3.3E-33 T 22-04-2016 SCD_RS07965 38e12037434a3b2448e15854ab063e33 114 Pfam PF04977 Septum formation initiator 11 89 7.9E-27 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 SCD_RS07965 38e12037434a3b2448e15854ab063e33 114 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 35.745 T 22-04-2016 IPR023081 Cell division protein FtsB SCD_RS09125 adfc28a9aac772684328579492c6f9e8 329 PANTHER PTHR11079:SF73 24 329 2.7E-130 T 22-04-2016 SCD_RS09125 adfc28a9aac772684328579492c6f9e8 329 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 31 327 5.4E-100 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS09125 adfc28a9aac772684328579492c6f9e8 329 PANTHER PTHR11079 24 329 2.7E-130 T 22-04-2016 SCD_RS09125 adfc28a9aac772684328579492c6f9e8 329 Gene3D G3DSA:3.10.290.10 34 84 6.1E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS09125 adfc28a9aac772684328579492c6f9e8 329 SUPERFAMILY SSF55120 96 327 4.93E-79 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS09125 adfc28a9aac772684328579492c6f9e8 329 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 152 166 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS09125 adfc28a9aac772684328579492c6f9e8 329 SUPERFAMILY SSF55174 34 86 1.28E-7 T 22-04-2016 SCD_RS09125 adfc28a9aac772684328579492c6f9e8 329 SMART SM00363 35 97 6.5E-4 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS09125 adfc28a9aac772684328579492c6f9e8 329 Pfam PF01479 S4 domain 36 72 2.5E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS09125 adfc28a9aac772684328579492c6f9e8 329 Pfam PF00849 RNA pseudouridylate synthase 110 258 7.8E-33 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS00995 70d65ab6265bbe94c237f0a1069b7f63 253 Gene3D G3DSA:3.60.10.10 1 253 4.7E-88 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SCD_RS00995 70d65ab6265bbe94c237f0a1069b7f63 253 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 253 2.6E-83 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 SCD_RS00995 70d65ab6265bbe94c237f0a1069b7f63 253 SUPERFAMILY SSF56219 1 253 7.46E-85 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SCD_RS00995 70d65ab6265bbe94c237f0a1069b7f63 253 PANTHER PTHR22748:SF7 1 253 3.2E-114 T 22-04-2016 SCD_RS00995 70d65ab6265bbe94c237f0a1069b7f63 253 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 SCD_RS00995 70d65ab6265bbe94c237f0a1069b7f63 253 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 210 221 - T 22-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 SCD_RS00995 70d65ab6265bbe94c237f0a1069b7f63 253 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 253 1.8E-87 T 22-04-2016 SCD_RS00995 70d65ab6265bbe94c237f0a1069b7f63 253 PANTHER PTHR22748 1 253 3.2E-114 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 SCD_RS00995 70d65ab6265bbe94c237f0a1069b7f63 253 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 246 3.8E-27 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SCD_RS04740 29940d71bddb6f5d8875815baf36efe8 185 PANTHER PTHR11839 13 174 1.9E-57 T 22-04-2016 SCD_RS04740 29940d71bddb6f5d8875815baf36efe8 185 SUPERFAMILY SSF55811 11 176 2.98E-48 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SCD_RS04740 29940d71bddb6f5d8875815baf36efe8 185 Pfam PF00293 NUDIX domain 46 146 1.1E-15 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SCD_RS04740 29940d71bddb6f5d8875815baf36efe8 185 Gene3D G3DSA:3.90.79.10 8 177 2.8E-56 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SCD_RS04740 29940d71bddb6f5d8875815baf36efe8 185 PANTHER PTHR11839:SF9 13 174 1.9E-57 T 22-04-2016 SCD_RS10250 45e4153a3e0afad50fa06f979cfe4ca0 230 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 144 1.3E-50 T 22-04-2016 IPR023370 TsaA-like domain SCD_RS10250 45e4153a3e0afad50fa06f979cfe4ca0 230 SUPERFAMILY SSF118196 1 224 9.81E-84 T 22-04-2016 IPR023370 TsaA-like domain SCD_RS10250 45e4153a3e0afad50fa06f979cfe4ca0 230 ProSitePatterns PS01318 TsaA-like domain signature. 85 96 - T 22-04-2016 IPR023368 Uncharacterised protein family UPF0066, conserved site SCD_RS10250 45e4153a3e0afad50fa06f979cfe4ca0 230 Gene3D G3DSA:2.40.30.70 2 155 1.3E-56 T 22-04-2016 IPR023370 TsaA-like domain SCD_RS10250 45e4153a3e0afad50fa06f979cfe4ca0 230 Pfam PF01980 Uncharacterised protein family UPF0066 18 141 1.8E-46 T 22-04-2016 IPR023370 TsaA-like domain SCD_RS10250 45e4153a3e0afad50fa06f979cfe4ca0 230 PANTHER PTHR12818 1 228 1.5E-101 T 22-04-2016 SCD_RS10250 45e4153a3e0afad50fa06f979cfe4ca0 230 PANTHER PTHR12818:SF6 1 228 1.5E-101 T 22-04-2016 SCD_RS08920 6e50d64d83ae5a591fe14d567f0144c7 79 PANTHER PTHR34772:SF1 2 74 1.3E-35 T 22-04-2016 SCD_RS08920 6e50d64d83ae5a591fe14d567f0144c7 79 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 65 27.371 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 SCD_RS08920 6e50d64d83ae5a591fe14d567f0144c7 79 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 8 65 4.8E-29 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 SCD_RS08920 6e50d64d83ae5a591fe14d567f0144c7 79 PANTHER PTHR34772 2 74 1.3E-35 T 22-04-2016 SCD_RS08920 6e50d64d83ae5a591fe14d567f0144c7 79 Gene3D G3DSA:2.30.30.100 2 71 1.2E-36 T 22-04-2016 SCD_RS08920 6e50d64d83ae5a591fe14d567f0144c7 79 SUPERFAMILY SSF50182 8 71 3.47E-24 T 22-04-2016 IPR010920 LSM domain SCD_RS06550 3b0d71dee667ce0128f5e0b806005c65 123 PANTHER PTHR38779:SF2 1 122 4.3E-24 T 22-04-2016 SCD_RS06550 3b0d71dee667ce0128f5e0b806005c65 123 TIGRFAM TIGR01707 gspI: type II secretion system protein I 6 104 1.1E-23 T 22-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 SCD_RS06550 3b0d71dee667ce0128f5e0b806005c65 123 SUPERFAMILY SSF54523 39 119 2.63E-21 T 22-04-2016 SCD_RS06550 3b0d71dee667ce0128f5e0b806005c65 123 PANTHER PTHR38779 1 122 4.3E-24 T 22-04-2016 SCD_RS06550 3b0d71dee667ce0128f5e0b806005c65 123 Pfam PF02501 Type II secretion system (T2SS), protein I 40 119 4.8E-25 T 22-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 SCD_RS06550 3b0d71dee667ce0128f5e0b806005c65 123 Pfam PF13633 Prokaryotic N-terminal methylation site 4 29 3.1E-11 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS06550 3b0d71dee667ce0128f5e0b806005c65 123 Gene3D G3DSA:3.30.1300.30 34 119 3.2E-20 T 22-04-2016 SCD_RS06550 3b0d71dee667ce0128f5e0b806005c65 123 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 2.2E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS05945 513c72dc789a8783def656edf4e90be1 339 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 33 57 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SCD_RS05945 513c72dc789a8783def656edf4e90be1 339 Gene3D G3DSA:3.40.1190.20 7 307 1.7E-50 T 22-04-2016 IPR029056 Ribokinase-like SCD_RS05945 513c72dc789a8783def656edf4e90be1 339 PANTHER PTHR10584 1 331 4.6E-42 T 22-04-2016 SCD_RS05945 513c72dc789a8783def656edf4e90be1 339 Pfam PF00294 pfkB family carbohydrate kinase 31 296 1.0E-32 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB SCD_RS05945 513c72dc789a8783def656edf4e90be1 339 SUPERFAMILY SSF53613 15 299 1.56E-48 T 22-04-2016 IPR029056 Ribokinase-like SCD_RS05945 513c72dc789a8783def656edf4e90be1 339 PANTHER PTHR10584:SF188 1 331 4.6E-42 T 22-04-2016 SCD_RS14950 72075bafc04dcda255549a84fa4fc174 458 SUPERFAMILY SSF50615 1 73 1.78E-26 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS14950 72075bafc04dcda255549a84fa4fc174 458 Gene3D G3DSA:2.40.10.170 1 73 6.5E-31 T 22-04-2016 SCD_RS14950 72075bafc04dcda255549a84fa4fc174 458 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 457 7.6E-256 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS14950 72075bafc04dcda255549a84fa4fc174 458 SMART SM00382 140 324 3.5E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS14950 72075bafc04dcda255549a84fa4fc174 458 PANTHER PTHR15184 1 458 0.0 T 22-04-2016 SCD_RS14950 72075bafc04dcda255549a84fa4fc174 458 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 7.2E-22 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS14950 72075bafc04dcda255549a84fa4fc174 458 PANTHER PTHR15184:SF44 1 458 0.0 T 22-04-2016 SCD_RS14950 72075bafc04dcda255549a84fa4fc174 458 SUPERFAMILY SSF52540 75 346 5.87E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14950 72075bafc04dcda255549a84fa4fc174 458 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 458 57.207 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS14950 72075bafc04dcda255549a84fa4fc174 458 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 340 3.5E-65 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS14950 72075bafc04dcda255549a84fa4fc174 458 Gene3D G3DSA:1.10.1140.10 343 458 5.9E-55 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS14950 72075bafc04dcda255549a84fa4fc174 458 Gene3D G3DSA:3.40.50.300 74 341 1.3E-110 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14950 72075bafc04dcda255549a84fa4fc174 458 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 331 340 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS14950 72075bafc04dcda255549a84fa4fc174 458 SUPERFAMILY SSF47917 343 457 2.09E-53 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS09045 caa0547e20c14e225755d6526a798a1e 502 Pfam PF00152 tRNA synthetases class II (D, K and N) 159 498 2.8E-83 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS09045 caa0547e20c14e225755d6526a798a1e 502 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 13 500 2.2E-205 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 SCD_RS09045 caa0547e20c14e225755d6526a798a1e 502 SUPERFAMILY SSF55681 158 499 3.78E-118 T 22-04-2016 SCD_RS09045 caa0547e20c14e225755d6526a798a1e 502 PANTHER PTHR22594 10 502 2.6E-262 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS09045 caa0547e20c14e225755d6526a798a1e 502 Gene3D G3DSA:3.30.930.10 153 498 2.2E-118 T 22-04-2016 SCD_RS09045 caa0547e20c14e225755d6526a798a1e 502 SUPERFAMILY SSF50249 10 151 8.57E-42 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS09045 caa0547e20c14e225755d6526a798a1e 502 PANTHER PTHR22594:SF4 10 502 2.6E-262 T 22-04-2016 SCD_RS09045 caa0547e20c14e225755d6526a798a1e 502 Gene3D G3DSA:2.40.50.140 13 150 3.9E-45 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS09045 caa0547e20c14e225755d6526a798a1e 502 Pfam PF01336 OB-fold nucleic acid binding domain 65 142 1.1E-12 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SCD_RS09045 caa0547e20c14e225755d6526a798a1e 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 240 253 4.0E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SCD_RS09045 caa0547e20c14e225755d6526a798a1e 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 211 227 4.0E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SCD_RS09045 caa0547e20c14e225755d6526a798a1e 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 258 275 4.0E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SCD_RS09045 caa0547e20c14e225755d6526a798a1e 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 383 399 4.0E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SCD_RS09045 caa0547e20c14e225755d6526a798a1e 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 195 205 4.0E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SCD_RS09045 caa0547e20c14e225755d6526a798a1e 502 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 18 501 44.343 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 SCD_RS04160 6c26cc7cea00e3a1fb2cd4851c3bc7e9 416 PANTHER PTHR11680:SF9 1 415 4.4E-277 T 22-04-2016 SCD_RS04160 6c26cc7cea00e3a1fb2cd4851c3bc7e9 416 Gene3D G3DSA:3.40.640.10 37 283 3.0E-105 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS04160 6c26cc7cea00e3a1fb2cd4851c3bc7e9 416 SUPERFAMILY SSF53383 6 415 1.27E-181 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS04160 6c26cc7cea00e3a1fb2cd4851c3bc7e9 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SCD_RS04160 6c26cc7cea00e3a1fb2cd4851c3bc7e9 416 Pfam PF00464 Serine hydroxymethyltransferase 9 384 1.9E-175 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SCD_RS04160 6c26cc7cea00e3a1fb2cd4851c3bc7e9 416 PIRSF PIRSF000412 1 416 2.7E-168 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SCD_RS04160 6c26cc7cea00e3a1fb2cd4851c3bc7e9 416 Gene3D G3DSA:3.90.1150.10 284 415 2.0E-53 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS04160 6c26cc7cea00e3a1fb2cd4851c3bc7e9 416 PANTHER PTHR11680 1 415 4.4E-277 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SCD_RS04160 6c26cc7cea00e3a1fb2cd4851c3bc7e9 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 415 52.923 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SCD_RS10150 d547225c229e574ea1aaa5a6aab04f4f 430 SUPERFAMILY SSF103473 27 412 8.76E-40 T 22-04-2016 IPR020846 Major facilitator superfamily domain SCD_RS10150 d547225c229e574ea1aaa5a6aab04f4f 430 Pfam PF11700 Vacuole effluxer Atg22 like 59 424 3.6E-42 T 22-04-2016 IPR024671 Autophagy-related protein 22-like SCD_RS10150 d547225c229e574ea1aaa5a6aab04f4f 430 Gene3D G3DSA:1.20.1250.20 238 412 1.7E-22 T 22-04-2016 SCD_RS10150 d547225c229e574ea1aaa5a6aab04f4f 430 Gene3D G3DSA:1.20.1250.20 48 213 1.0E-11 T 22-04-2016 SCD_RS10150 d547225c229e574ea1aaa5a6aab04f4f 430 PANTHER PTHR23519 1 428 2.7E-65 T 22-04-2016 SCD_RS09240 03768f33815c891295fd80d284612e3d 748 Gene3D G3DSA:3.90.1150.10 456 623 1.5E-68 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS09240 03768f33815c891295fd80d284612e3d 748 PANTHER PTHR11751:SF406 544 667 1.5E-142 T 22-04-2016 SCD_RS09240 03768f33815c891295fd80d284612e3d 748 PANTHER PTHR11751:SF406 519 527 1.5E-142 T 22-04-2016 SCD_RS09240 03768f33815c891295fd80d284612e3d 748 PANTHER PTHR11751:SF406 150 491 1.5E-142 T 22-04-2016 SCD_RS09240 03768f33815c891295fd80d284612e3d 748 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 607 732 6.2E-46 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 SCD_RS09240 03768f33815c891295fd80d284612e3d 748 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 21 143 9.1E-36 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 SCD_RS09240 03768f33815c891295fd80d284612e3d 748 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 389 403 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 SCD_RS09240 03768f33815c891295fd80d284612e3d 748 SUPERFAMILY SSF55904 602 746 1.19E-44 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 SCD_RS09240 03768f33815c891295fd80d284612e3d 748 SUPERFAMILY SSF53383 149 600 2.24E-116 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS09240 03768f33815c891295fd80d284612e3d 748 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 149 580 3.5E-151 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 SCD_RS09240 03768f33815c891295fd80d284612e3d 748 Gene3D G3DSA:3.40.640.10 149 453 3.4E-113 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS09240 03768f33815c891295fd80d284612e3d 748 Gene3D G3DSA:3.90.100.10 624 746 8.4E-35 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 SCD_RS09240 03768f33815c891295fd80d284612e3d 748 PANTHER PTHR11751 544 667 1.5E-142 T 22-04-2016 SCD_RS09240 03768f33815c891295fd80d284612e3d 748 PANTHER PTHR11751 519 527 1.5E-142 T 22-04-2016 SCD_RS09240 03768f33815c891295fd80d284612e3d 748 PANTHER PTHR11751 150 491 1.5E-142 T 22-04-2016 SCD_RS09240 03768f33815c891295fd80d284612e3d 748 PIRSF PIRSF009393 1 748 2.2E-280 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 SCD_RS02535 5bf13c6f367baf627316e23ed0c9b49d 729 Pfam PF13328 HD domain 42 191 3.7E-53 T 22-04-2016 IPR003607 HD/PDEase domain SCD_RS02535 5bf13c6f367baf627316e23ed0c9b49d 729 SUPERFAMILY SSF81301 197 408 2.13E-65 T 22-04-2016 SCD_RS02535 5bf13c6f367baf627316e23ed0c9b49d 729 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 42 718 4.5E-242 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 SCD_RS02535 5bf13c6f367baf627316e23ed0c9b49d 729 Pfam PF13291 ACT domain 641 719 4.0E-19 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SCD_RS02535 5bf13c6f367baf627316e23ed0c9b49d 729 PANTHER PTHR21262:SF0 20 722 0.0 T 22-04-2016 SCD_RS02535 5bf13c6f367baf627316e23ed0c9b49d 729 Gene3D G3DSA:3.30.460.10 196 340 3.2E-46 T 22-04-2016 SCD_RS02535 5bf13c6f367baf627316e23ed0c9b49d 729 SMART SM00954 251 361 6.0E-64 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 SCD_RS02535 5bf13c6f367baf627316e23ed0c9b49d 729 Gene3D G3DSA:3.30.70.260 644 717 5.1E-11 T 22-04-2016 SCD_RS02535 5bf13c6f367baf627316e23ed0c9b49d 729 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 2.6E-34 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 SCD_RS02535 5bf13c6f367baf627316e23ed0c9b49d 729 Pfam PF02824 TGS domain 404 463 3.6E-18 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 SCD_RS02535 5bf13c6f367baf627316e23ed0c9b49d 729 Gene3D G3DSA:3.10.20.30 403 464 3.6E-22 T 22-04-2016 IPR012675 Beta-grasp domain SCD_RS02535 5bf13c6f367baf627316e23ed0c9b49d 729 SUPERFAMILY SSF81271 391 463 6.54E-21 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SCD_RS02535 5bf13c6f367baf627316e23ed0c9b49d 729 SMART SM00471 57 169 2.0E-10 T 22-04-2016 IPR003607 HD/PDEase domain SCD_RS02535 5bf13c6f367baf627316e23ed0c9b49d 729 SUPERFAMILY SSF109604 24 207 7.61E-75 T 22-04-2016 SCD_RS02535 5bf13c6f367baf627316e23ed0c9b49d 729 PANTHER PTHR21262 20 722 0.0 T 22-04-2016 SCD_RS02535 5bf13c6f367baf627316e23ed0c9b49d 729 SUPERFAMILY SSF55021 645 720 1.58E-9 T 22-04-2016 SCD_RS01410 4844d31fd9420593dc033c837b101512 274 PANTHER PTHR41542 1 274 5.1E-33 T 22-04-2016 SCD_RS01410 4844d31fd9420593dc033c837b101512 274 SMART SM00978 142 273 9.8E-31 T 22-04-2016 IPR007379 Tim44-like domain SCD_RS01410 4844d31fd9420593dc033c837b101512 274 Pfam PF04280 Tim44-like domain 143 273 6.5E-16 T 22-04-2016 IPR007379 Tim44-like domain SCD_RS01410 4844d31fd9420593dc033c837b101512 274 SUPERFAMILY SSF54427 143 273 4.24E-12 T 22-04-2016 IPR032710 NTF2-like domain SCD_RS01410 4844d31fd9420593dc033c837b101512 274 PANTHER PTHR41542:SF1 1 274 5.1E-33 T 22-04-2016 SCD_RS12715 eee87d4b81841329175bc07bbdba1c8f 520 PANTHER PTHR38686 5 512 1.2E-104 T 22-04-2016 SCD_RS12715 eee87d4b81841329175bc07bbdba1c8f 520 SUPERFAMILY SSF56317 231 485 6.02E-42 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SCD_RS12715 eee87d4b81841329175bc07bbdba1c8f 520 Gene3D G3DSA:3.60.110.10 230 463 7.8E-28 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SCD_RS12715 eee87d4b81841329175bc07bbdba1c8f 520 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 12 493 23.633 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 SCD_RS12715 eee87d4b81841329175bc07bbdba1c8f 520 Pfam PF00795 Carbon-nitrogen hydrolase 236 466 7.6E-29 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SCD_RS12715 eee87d4b81841329175bc07bbdba1c8f 520 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 66 455 9.9E-102 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 SCD_RS14520 d196f06d617f56b20ef63034f21161e3 209 PANTHER PTHR33751:SF3 26 207 2.0E-48 T 22-04-2016 SCD_RS14520 d196f06d617f56b20ef63034f21161e3 209 Gene3D G3DSA:1.10.760.10 125 205 3.0E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS14520 d196f06d617f56b20ef63034f21161e3 209 SUPERFAMILY SSF46626 118 205 3.01E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS14520 d196f06d617f56b20ef63034f21161e3 209 PANTHER PTHR33751 26 207 2.0E-48 T 22-04-2016 SCD_RS14520 d196f06d617f56b20ef63034f21161e3 209 SUPERFAMILY SSF46626 8 109 5.4E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS14520 d196f06d617f56b20ef63034f21161e3 209 Gene3D G3DSA:1.10.760.10 33 108 4.8E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS14520 d196f06d617f56b20ef63034f21161e3 209 Pfam PF00034 Cytochrome c 29 105 1.9E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS14520 d196f06d617f56b20ef63034f21161e3 209 Pfam PF00034 Cytochrome c 121 204 3.6E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS14520 d196f06d617f56b20ef63034f21161e3 209 PIRSF PIRSF000005 2 208 5.8E-56 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 SCD_RS02890 a49d6a065d2664750c9cd528809e323e 79 Gene3D G3DSA:3.30.300.90 1 78 1.1E-29 T 22-04-2016 IPR002634 BolA protein SCD_RS02890 a49d6a065d2664750c9cd528809e323e 79 PANTHER PTHR12735 1 78 2.1E-19 T 22-04-2016 SCD_RS02890 a49d6a065d2664750c9cd528809e323e 79 PANTHER PTHR12735:SF3 1 78 2.1E-19 T 22-04-2016 SCD_RS02890 a49d6a065d2664750c9cd528809e323e 79 PIRSF PIRSF003113 1 79 2.9E-24 T 22-04-2016 IPR002634 BolA protein SCD_RS02890 a49d6a065d2664750c9cd528809e323e 79 Pfam PF01722 BolA-like protein 19 74 3.6E-19 T 22-04-2016 IPR002634 BolA protein SCD_RS02890 a49d6a065d2664750c9cd528809e323e 79 SUPERFAMILY SSF82657 1 78 1.44E-29 T 22-04-2016 IPR002634 BolA protein SCD_RS09600 5aec0768ea1b4096f886f21db7774735 284 Gene3D G3DSA:1.10.40.50 227 283 1.3E-19 T 22-04-2016 SCD_RS09600 5aec0768ea1b4096f886f21db7774735 284 SUPERFAMILY SSF50249 3 59 8.14E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS09600 5aec0768ea1b4096f886f21db7774735 284 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 3 284 31.37 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 SCD_RS09600 5aec0768ea1b4096f886f21db7774735 284 Gene3D G3DSA:3.40.50.300 71 225 4.9E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS09600 5aec0768ea1b4096f886f21db7774735 284 Gene3D G3DSA:2.40.50.140 3 57 3.0E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS09600 5aec0768ea1b4096f886f21db7774735 284 SUPERFAMILY SSF52540 72 283 7.41E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS09600 5aec0768ea1b4096f886f21db7774735 284 PANTHER PTHR32120:SF2 3 275 8.6E-88 T 22-04-2016 SCD_RS09600 5aec0768ea1b4096f886f21db7774735 284 Pfam PF03193 Protein of unknown function, DUF258 57 225 5.3E-50 T 22-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 SCD_RS09600 5aec0768ea1b4096f886f21db7774735 284 PANTHER PTHR32120 3 275 8.6E-88 T 22-04-2016 SCD_RS09600 5aec0768ea1b4096f886f21db7774735 284 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 37 283 6.5E-66 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 PRINTS PR00301 70kDa heat shock protein signature 151 171 1.9E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 PRINTS PR00301 70kDa heat shock protein signature 332 348 1.9E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.9E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 PRINTS PR00301 70kDa heat shock protein signature 48 60 1.9E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 PRINTS PR00301 70kDa heat shock protein signature 388 407 1.9E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 PRINTS PR00301 70kDa heat shock protein signature 469 485 1.9E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 PRINTS PR00301 70kDa heat shock protein signature 210 220 1.9E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 PRINTS PR00301 70kDa heat shock protein signature 363 383 1.9E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 Gene3D G3DSA:3.30.420.40 201 237 4.6E-30 T 22-04-2016 SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 Gene3D G3DSA:3.30.420.40 317 359 4.6E-30 T 22-04-2016 SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 619 2.6E-275 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 Gene3D G3DSA:3.30.420.40 19 200 2.6E-54 T 22-04-2016 SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 Pfam PF00012 Hsp70 protein 21 602 7.7E-181 T 22-04-2016 IPR013126 Heat shock protein 70 family SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 SUPERFAMILY SSF100934 507 618 2.16E-32 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 Gene3D G3DSA:2.60.34.10 390 530 3.0E-52 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 620 43.519 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 204 217 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 SUPERFAMILY SSF100920 387 536 1.7E-48 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 Gene3D G3DSA:1.20.1270.10 531 619 1.4E-28 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 SUPERFAMILY SSF53067 19 195 5.18E-52 T 22-04-2016 SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 SUPERFAMILY SSF53067 199 382 2.87E-46 T 22-04-2016 SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 PANTHER PTHR19375 19 608 3.6E-271 T 22-04-2016 SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 Gene3D G3DSA:3.90.640.10 238 312 6.5E-5 T 22-04-2016 SCD_RS06245 fb9d3cf10e0cc3455a2f3ba8d46d38ad 622 PANTHER PTHR19375:SF176 19 608 3.6E-271 T 22-04-2016 SCD_RS12640 194a8d3625c946b0c46a66fc0888f9ff 435 Gene3D G3DSA:3.90.230.10 177 432 9.7E-86 T 22-04-2016 IPR000994 Peptidase M24, structural domain SCD_RS12640 194a8d3625c946b0c46a66fc0888f9ff 435 PANTHER PTHR10804 7 432 2.2E-146 T 22-04-2016 SCD_RS12640 194a8d3625c946b0c46a66fc0888f9ff 435 PRINTS PR00599 Methionine aminopeptidase-1 signature 369 381 6.9E-6 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SCD_RS12640 194a8d3625c946b0c46a66fc0888f9ff 435 PRINTS PR00599 Methionine aminopeptidase-1 signature 251 267 6.9E-6 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SCD_RS12640 194a8d3625c946b0c46a66fc0888f9ff 435 PANTHER PTHR10804:SF17 7 432 2.2E-146 T 22-04-2016 SCD_RS12640 194a8d3625c946b0c46a66fc0888f9ff 435 Pfam PF05195 Aminopeptidase P, N-terminal domain 7 120 5.4E-37 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 SCD_RS12640 194a8d3625c946b0c46a66fc0888f9ff 435 SMART SM01011 2 134 3.9E-63 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 SCD_RS12640 194a8d3625c946b0c46a66fc0888f9ff 435 SUPERFAMILY SSF53092 1 172 4.66E-52 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal SCD_RS12640 194a8d3625c946b0c46a66fc0888f9ff 435 Gene3D G3DSA:3.40.350.10 2 176 1.0E-50 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SCD_RS12640 194a8d3625c946b0c46a66fc0888f9ff 435 SUPERFAMILY SSF55920 174 432 3.4E-85 T 22-04-2016 IPR000994 Peptidase M24, structural domain SCD_RS12640 194a8d3625c946b0c46a66fc0888f9ff 435 Pfam PF00557 Metallopeptidase family M24 179 410 1.6E-66 T 22-04-2016 IPR000994 Peptidase M24, structural domain SCD_RS04295 c4efb43cb824c95bfb1c6e9254f91038 274 SUPERFAMILY SSF50249 160 266 4.8E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS04295 c4efb43cb824c95bfb1c6e9254f91038 274 Gene3D G3DSA:2.40.50.140 173 268 5.0E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS04295 c4efb43cb824c95bfb1c6e9254f91038 274 Pfam PF14743 DNA ligase OB-like domain 200 266 2.4E-26 T 22-04-2016 IPR029319 DNA ligase, OB-like domain SCD_RS04295 c4efb43cb824c95bfb1c6e9254f91038 274 PANTHER PTHR10459:SF61 30 269 1.6E-50 T 22-04-2016 SCD_RS04295 c4efb43cb824c95bfb1c6e9254f91038 274 SUPERFAMILY SSF56091 13 186 1.55E-38 T 22-04-2016 SCD_RS04295 c4efb43cb824c95bfb1c6e9254f91038 274 PANTHER PTHR10459 30 269 1.6E-50 T 22-04-2016 SCD_RS04295 c4efb43cb824c95bfb1c6e9254f91038 274 Gene3D G3DSA:3.30.1490.70 12 38 6.6E-8 T 22-04-2016 SCD_RS04295 c4efb43cb824c95bfb1c6e9254f91038 274 Gene3D G3DSA:3.30.1490.70 144 172 6.6E-8 T 22-04-2016 SCD_RS10900 6d74954d2d3fe4fc6b0c05a0ed400a24 456 Gene3D G3DSA:1.20.200.10 120 389 1.7E-87 T 22-04-2016 SCD_RS10900 6d74954d2d3fe4fc6b0c05a0ed400a24 456 Gene3D G3DSA:1.10.275.10 1 119 2.4E-48 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal SCD_RS10900 6d74954d2d3fe4fc6b0c05a0ed400a24 456 Pfam PF00206 Lyase 14 312 3.5E-57 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal SCD_RS10900 6d74954d2d3fe4fc6b0c05a0ed400a24 456 Gene3D G3DSA:1.10.40.30 390 446 1.2E-32 T 22-04-2016 SCD_RS10900 6d74954d2d3fe4fc6b0c05a0ed400a24 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 453 9.9E-126 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 SCD_RS10900 6d74954d2d3fe4fc6b0c05a0ed400a24 456 PANTHER PTHR11444:SF17 4 456 8.6E-272 T 22-04-2016 SCD_RS10900 6d74954d2d3fe4fc6b0c05a0ed400a24 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 446 2.3E-50 T 22-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 SCD_RS10900 6d74954d2d3fe4fc6b0c05a0ed400a24 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 1.9E-15 T 22-04-2016 IPR000362 Fumarate lyase family SCD_RS10900 6d74954d2d3fe4fc6b0c05a0ed400a24 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 1.9E-15 T 22-04-2016 IPR000362 Fumarate lyase family SCD_RS10900 6d74954d2d3fe4fc6b0c05a0ed400a24 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 1.9E-15 T 22-04-2016 IPR000362 Fumarate lyase family SCD_RS10900 6d74954d2d3fe4fc6b0c05a0ed400a24 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 1.9E-15 T 22-04-2016 IPR000362 Fumarate lyase family SCD_RS10900 6d74954d2d3fe4fc6b0c05a0ed400a24 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SCD_RS10900 6d74954d2d3fe4fc6b0c05a0ed400a24 456 SUPERFAMILY SSF48557 10 454 5.81E-108 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 SCD_RS10900 6d74954d2d3fe4fc6b0c05a0ed400a24 456 PANTHER PTHR11444 4 456 8.6E-272 T 22-04-2016 IPR000362 Fumarate lyase family SCD_RS07460 2f562e548e6a0c8c1e260b89b3a271d0 644 SMART SM00267 466 638 3.1E-59 T 22-04-2016 IPR000160 GGDEF domain SCD_RS07460 2f562e548e6a0c8c1e260b89b3a271d0 644 SMART SM00448 326 439 3.0E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS07460 2f562e548e6a0c8c1e260b89b3a271d0 644 Gene3D G3DSA:1.10.3150.10 11 282 4.0E-67 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS07460 2f562e548e6a0c8c1e260b89b3a271d0 644 Gene3D G3DSA:3.40.50.2300 325 453 1.2E-36 T 22-04-2016 SCD_RS07460 2f562e548e6a0c8c1e260b89b3a271d0 644 Gene3D G3DSA:3.30.70.270 479 639 8.9E-53 T 22-04-2016 SCD_RS07460 2f562e548e6a0c8c1e260b89b3a271d0 644 Pfam PF00072 Response regulator receiver domain 328 439 8.8E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS07460 2f562e548e6a0c8c1e260b89b3a271d0 644 SUPERFAMILY SSF52172 325 473 2.7E-39 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS07460 2f562e548e6a0c8c1e260b89b3a271d0 644 Pfam PF08668 HDOD domain 18 213 3.7E-51 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS07460 2f562e548e6a0c8c1e260b89b3a271d0 644 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 473 637 1.3E-52 T 22-04-2016 IPR000160 GGDEF domain SCD_RS07460 2f562e548e6a0c8c1e260b89b3a271d0 644 PANTHER PTHR33525:SF3 1 294 8.8E-43 T 22-04-2016 SCD_RS07460 2f562e548e6a0c8c1e260b89b3a271d0 644 PANTHER PTHR33525 1 294 8.8E-43 T 22-04-2016 SCD_RS07460 2f562e548e6a0c8c1e260b89b3a271d0 644 Pfam PF00990 Diguanylate cyclase, GGDEF domain 477 634 4.3E-47 T 22-04-2016 IPR000160 GGDEF domain SCD_RS07460 2f562e548e6a0c8c1e260b89b3a271d0 644 SUPERFAMILY SSF109604 12 283 2.7E-57 T 22-04-2016 SCD_RS07460 2f562e548e6a0c8c1e260b89b3a271d0 644 SUPERFAMILY SSF55073 482 637 9.42E-47 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS14075 6873a1c364e7073a65914249b0fd49cd 393 PRINTS PR00477 Phosphoglycerate kinase family signature 187 206 1.1E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SCD_RS14075 6873a1c364e7073a65914249b0fd49cd 393 PRINTS PR00477 Phosphoglycerate kinase family signature 133 155 1.1E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SCD_RS14075 6873a1c364e7073a65914249b0fd49cd 393 PRINTS PR00477 Phosphoglycerate kinase family signature 164 186 1.1E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SCD_RS14075 6873a1c364e7073a65914249b0fd49cd 393 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.1E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SCD_RS14075 6873a1c364e7073a65914249b0fd49cd 393 PRINTS PR00477 Phosphoglycerate kinase family signature 342 353 1.1E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SCD_RS14075 6873a1c364e7073a65914249b0fd49cd 393 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.1E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SCD_RS14075 6873a1c364e7073a65914249b0fd49cd 393 PRINTS PR00477 Phosphoglycerate kinase family signature 365 382 1.1E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SCD_RS14075 6873a1c364e7073a65914249b0fd49cd 393 PRINTS PR00477 Phosphoglycerate kinase family signature 105 120 1.1E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SCD_RS14075 6873a1c364e7073a65914249b0fd49cd 393 PRINTS PR00477 Phosphoglycerate kinase family signature 309 334 1.1E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SCD_RS14075 6873a1c364e7073a65914249b0fd49cd 393 PANTHER PTHR11406 1 393 3.4E-183 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SCD_RS14075 6873a1c364e7073a65914249b0fd49cd 393 SUPERFAMILY SSF53748 3 389 8.83E-142 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SCD_RS14075 6873a1c364e7073a65914249b0fd49cd 393 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SCD_RS14075 6873a1c364e7073a65914249b0fd49cd 393 PIRSF PIRSF000724 1 393 6.3E-134 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SCD_RS14075 6873a1c364e7073a65914249b0fd49cd 393 Gene3D G3DSA:3.40.50.1270 176 377 4.1E-80 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SCD_RS14075 6873a1c364e7073a65914249b0fd49cd 393 Pfam PF00162 Phosphoglycerate kinase 6 379 1.4E-136 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SCD_RS14075 6873a1c364e7073a65914249b0fd49cd 393 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 389 37.936 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SCD_RS14075 6873a1c364e7073a65914249b0fd49cd 393 Gene3D G3DSA:3.40.50.1260 5 175 4.8E-63 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SCD_RS15010 67a4fc96ec3f3bddcbb860b16ede8a66 446 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 446 31.371 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 SCD_RS15010 67a4fc96ec3f3bddcbb860b16ede8a66 446 PRINTS PR00449 Transforming protein P21 ras signature 256 278 3.0E-6 T 22-04-2016 SCD_RS15010 67a4fc96ec3f3bddcbb860b16ede8a66 446 PRINTS PR00449 Transforming protein P21 ras signature 216 237 3.0E-6 T 22-04-2016 SCD_RS15010 67a4fc96ec3f3bddcbb860b16ede8a66 446 PRINTS PR00449 Transforming protein P21 ras signature 321 334 3.0E-6 T 22-04-2016 SCD_RS15010 67a4fc96ec3f3bddcbb860b16ede8a66 446 Gene3D G3DSA:3.30.1360.120 2 120 3.1E-42 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SCD_RS15010 67a4fc96ec3f3bddcbb860b16ede8a66 446 PANTHER PTHR11649:SF56 8 446 2.1E-144 T 22-04-2016 SCD_RS15010 67a4fc96ec3f3bddcbb860b16ede8a66 446 Gene3D G3DSA:3.40.50.300 285 370 1.1E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS15010 67a4fc96ec3f3bddcbb860b16ede8a66 446 Gene3D G3DSA:1.20.120.430 121 181 5.4E-52 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SCD_RS15010 67a4fc96ec3f3bddcbb860b16ede8a66 446 Gene3D G3DSA:1.20.120.430 379 446 5.4E-52 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SCD_RS15010 67a4fc96ec3f3bddcbb860b16ede8a66 446 Gene3D G3DSA:1.20.120.430 248 270 5.4E-52 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SCD_RS15010 67a4fc96ec3f3bddcbb860b16ede8a66 446 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 446 3.7E-102 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 SCD_RS15010 67a4fc96ec3f3bddcbb860b16ede8a66 446 Gene3D G3DSA:3.40.50.300 192 247 2.4E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS15010 67a4fc96ec3f3bddcbb860b16ede8a66 446 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 217 336 2.9E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SCD_RS15010 67a4fc96ec3f3bddcbb860b16ede8a66 446 Pfam PF01926 50S ribosome-binding GTPase 218 331 3.5E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS15010 67a4fc96ec3f3bddcbb860b16ede8a66 446 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 119 7.2E-37 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal SCD_RS15010 67a4fc96ec3f3bddcbb860b16ede8a66 446 SUPERFAMILY SSF52540 203 367 1.12E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS15010 67a4fc96ec3f3bddcbb860b16ede8a66 446 SUPERFAMILY SSF52540 71 169 1.12E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS15010 67a4fc96ec3f3bddcbb860b16ede8a66 446 PANTHER PTHR11649 8 446 2.1E-144 T 22-04-2016 SCD_RS15010 67a4fc96ec3f3bddcbb860b16ede8a66 446 Pfam PF12631 MnmE helical domain 122 443 1.6E-53 T 22-04-2016 IPR025867 MnmE, helical domain SCD_RS13855 d31fd7f897a0c8083467a0daa4a619e9 255 Pfam PF04397 LytTr DNA-binding domain 151 251 8.1E-22 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SCD_RS13855 d31fd7f897a0c8083467a0daa4a619e9 255 Gene3D G3DSA:3.40.50.2300 3 122 1.8E-35 T 22-04-2016 SCD_RS13855 d31fd7f897a0c8083467a0daa4a619e9 255 Gene3D G3DSA:2.40.50.40 144 206 2.0E-15 T 22-04-2016 SCD_RS13855 d31fd7f897a0c8083467a0daa4a619e9 255 SUPERFAMILY SSF52172 5 126 7.83E-35 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS13855 d31fd7f897a0c8083467a0daa4a619e9 255 PANTHER PTHR26402 5 119 2.0E-37 T 22-04-2016 SCD_RS13855 d31fd7f897a0c8083467a0daa4a619e9 255 SMART SM00448 5 119 9.1E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS13855 d31fd7f897a0c8083467a0daa4a619e9 255 Pfam PF00072 Response regulator receiver domain 7 119 3.6E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS13855 d31fd7f897a0c8083467a0daa4a619e9 255 SMART SM00850 150 254 5.2E-28 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SCD_RS12520 a1053c167c497f8a3b1b81df09fbedce 189 PANTHER PTHR11922:SF7 1 186 3.9E-102 T 22-04-2016 SCD_RS12520 a1053c167c497f8a3b1b81df09fbedce 189 Pfam PF00117 Glutamine amidotransferase class-I 4 186 1.3E-57 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SCD_RS12520 a1053c167c497f8a3b1b81df09fbedce 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.3E-13 T 22-04-2016 SCD_RS12520 a1053c167c497f8a3b1b81df09fbedce 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 1.3E-13 T 22-04-2016 SCD_RS12520 a1053c167c497f8a3b1b81df09fbedce 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.3E-13 T 22-04-2016 SCD_RS12520 a1053c167c497f8a3b1b81df09fbedce 189 PANTHER PTHR11922 1 186 3.9E-102 T 22-04-2016 SCD_RS12520 a1053c167c497f8a3b1b81df09fbedce 189 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 4.8E-86 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SCD_RS12520 a1053c167c497f8a3b1b81df09fbedce 189 Gene3D G3DSA:3.40.50.880 2 186 7.0E-71 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SCD_RS12520 a1053c167c497f8a3b1b81df09fbedce 189 PRINTS PR00097 Anthranilate synthase component II signature 47 56 2.6E-37 T 22-04-2016 SCD_RS12520 a1053c167c497f8a3b1b81df09fbedce 189 PRINTS PR00097 Anthranilate synthase component II signature 119 131 2.6E-37 T 22-04-2016 SCD_RS12520 a1053c167c497f8a3b1b81df09fbedce 189 PRINTS PR00097 Anthranilate synthase component II signature 99 107 2.6E-37 T 22-04-2016 SCD_RS12520 a1053c167c497f8a3b1b81df09fbedce 189 PRINTS PR00097 Anthranilate synthase component II signature 164 177 2.6E-37 T 22-04-2016 SCD_RS12520 a1053c167c497f8a3b1b81df09fbedce 189 PRINTS PR00097 Anthranilate synthase component II signature 74 85 2.6E-37 T 22-04-2016 SCD_RS12520 a1053c167c497f8a3b1b81df09fbedce 189 PRINTS PR00097 Anthranilate synthase component II signature 2 16 2.6E-37 T 22-04-2016 SCD_RS12520 a1053c167c497f8a3b1b81df09fbedce 189 SUPERFAMILY SSF52317 1 186 3.59E-59 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SCD_RS12520 a1053c167c497f8a3b1b81df09fbedce 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.8E-6 T 22-04-2016 SCD_RS12520 a1053c167c497f8a3b1b81df09fbedce 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.8E-6 T 22-04-2016 SCD_RS02205 ef0054bf968a499027ba7a4d5d38b791 613 Gene3D G3DSA:3.40.50.410 445 575 2.0E-9 T 22-04-2016 IPR002035 von Willebrand factor, type A SCD_RS02205 ef0054bf968a499027ba7a4d5d38b791 613 Pfam PF00092 von Willebrand factor type A domain 449 576 2.5E-7 T 22-04-2016 IPR002035 von Willebrand factor, type A SCD_RS02205 ef0054bf968a499027ba7a4d5d38b791 613 PANTHER PTHR41248 1 613 2.3E-106 T 22-04-2016 SCD_RS02205 ef0054bf968a499027ba7a4d5d38b791 613 SMART SM00327 422 612 1.4E-19 T 22-04-2016 IPR002035 von Willebrand factor, type A SCD_RS02205 ef0054bf968a499027ba7a4d5d38b791 613 SUPERFAMILY SSF53300 425 607 3.94E-20 T 22-04-2016 IPR002035 von Willebrand factor, type A SCD_RS02205 ef0054bf968a499027ba7a4d5d38b791 613 PANTHER PTHR41248:SF1 1 613 2.3E-106 T 22-04-2016 SCD_RS06995 184e6c151c912d385266fb49d364d8d2 570 SMART SM00267 136 308 2.3E-40 T 22-04-2016 IPR000160 GGDEF domain SCD_RS06995 184e6c151c912d385266fb49d364d8d2 570 SMART SM00052 320 568 2.6E-76 T 22-04-2016 IPR001633 EAL domain SCD_RS06995 184e6c151c912d385266fb49d364d8d2 570 PANTHER PTHR33121 322 566 6.1E-64 T 22-04-2016 SCD_RS06995 184e6c151c912d385266fb49d364d8d2 570 Pfam PF00990 Diguanylate cyclase, GGDEF domain 148 304 2.2E-35 T 22-04-2016 IPR000160 GGDEF domain SCD_RS06995 184e6c151c912d385266fb49d364d8d2 570 Gene3D G3DSA:3.30.450.20 5 133 2.5E-14 T 22-04-2016 SCD_RS06995 184e6c151c912d385266fb49d364d8d2 570 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 144 308 5.6E-37 T 22-04-2016 IPR000160 GGDEF domain SCD_RS06995 184e6c151c912d385266fb49d364d8d2 570 PANTHER PTHR33121:SF10 322 566 6.1E-64 T 22-04-2016 SCD_RS06995 184e6c151c912d385266fb49d364d8d2 570 Pfam PF00563 EAL domain 328 563 6.0E-64 T 22-04-2016 IPR001633 EAL domain SCD_RS06995 184e6c151c912d385266fb49d364d8d2 570 SUPERFAMILY SSF141868 327 568 2.62E-71 T 22-04-2016 IPR001633 EAL domain SCD_RS06995 184e6c151c912d385266fb49d364d8d2 570 SUPERFAMILY SSF55073 152 310 6.36E-41 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS06995 184e6c151c912d385266fb49d364d8d2 570 Gene3D G3DSA:3.30.70.270 148 312 1.3E-44 T 22-04-2016 SCD_RS06995 184e6c151c912d385266fb49d364d8d2 570 Gene3D G3DSA:3.20.20.450 323 569 6.8E-76 T 22-04-2016 IPR001633 EAL domain SCD_RS06995 184e6c151c912d385266fb49d364d8d2 570 Pfam PF08448 PAS fold 23 137 3.8E-11 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS06995 184e6c151c912d385266fb49d364d8d2 570 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 143 1.2E-7 T 22-04-2016 IPR000014 PAS domain SCD_RS06995 184e6c151c912d385266fb49d364d8d2 570 SUPERFAMILY SSF55785 2 134 6.63E-15 T 22-04-2016 IPR000014 PAS domain SCD_RS15535 98974b53e6e34ca10714955af3f6dd4a 727 Gene3D G3DSA:2.160.20.10 82 314 1.1E-20 T 22-04-2016 IPR012334 Pectin lyase fold SCD_RS15535 98974b53e6e34ca10714955af3f6dd4a 727 SUPERFAMILY SSF51126 41 320 1.22E-33 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor SCD_RS15535 98974b53e6e34ca10714955af3f6dd4a 727 PANTHER PTHR12338:SF6 16 302 3.0E-42 T 22-04-2016 SCD_RS15535 98974b53e6e34ca10714955af3f6dd4a 727 SMART SM00912 42 155 9.4E-27 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal SCD_RS15535 98974b53e6e34ca10714955af3f6dd4a 727 PANTHER PTHR12338 16 302 3.0E-42 T 22-04-2016 SCD_RS15535 98974b53e6e34ca10714955af3f6dd4a 727 Pfam PF05860 haemagglutination activity domain 46 150 8.7E-19 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal SCD_RS15535 98974b53e6e34ca10714955af3f6dd4a 727 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 76 149 6.8E-20 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal SCD_RS13550 80f2d47cf951f6031898e32566103423 224 PANTHER PTHR30070:SF1 4 224 2.8E-58 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13550 80f2d47cf951f6031898e32566103423 224 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 10 220 2.1E-72 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria SCD_RS13550 80f2d47cf951f6031898e32566103423 224 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 136 159 2.6E-58 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13550 80f2d47cf951f6031898e32566103423 224 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 105 123 2.6E-58 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13550 80f2d47cf951f6031898e32566103423 224 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 80 103 2.6E-58 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13550 80f2d47cf951f6031898e32566103423 224 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 31 52 2.6E-58 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13550 80f2d47cf951f6031898e32566103423 224 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 197 220 2.6E-58 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13550 80f2d47cf951f6031898e32566103423 224 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 57 74 2.6E-58 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13550 80f2d47cf951f6031898e32566103423 224 PANTHER PTHR30070 4 224 2.8E-58 T 22-04-2016 SCD_RS13550 80f2d47cf951f6031898e32566103423 224 PIRSF PIRSF002764 1 224 7.4E-80 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria SCD_RS13550 80f2d47cf951f6031898e32566103423 224 Pfam PF03379 CcmB protein 9 221 9.7E-73 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS10675 92f14ef1fc90080ff76fc8c03f1a9111 115 Pfam PF01022 Bacterial regulatory protein, arsR family 13 59 3.9E-15 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SCD_RS10675 92f14ef1fc90080ff76fc8c03f1a9111 115 SUPERFAMILY SSF46785 3 86 7.46E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS10675 92f14ef1fc90080ff76fc8c03f1a9111 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 5.5E-21 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SCD_RS10675 92f14ef1fc90080ff76fc8c03f1a9111 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 5.5E-21 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SCD_RS10675 92f14ef1fc90080ff76fc8c03f1a9111 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 5.5E-21 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SCD_RS10675 92f14ef1fc90080ff76fc8c03f1a9111 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 39 5.5E-21 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SCD_RS10675 92f14ef1fc90080ff76fc8c03f1a9111 115 PANTHER PTHR33154 6 97 1.7E-24 T 22-04-2016 SCD_RS10675 92f14ef1fc90080ff76fc8c03f1a9111 115 SMART SM00418 6 80 1.6E-27 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SCD_RS10675 92f14ef1fc90080ff76fc8c03f1a9111 115 Gene3D G3DSA:1.10.10.10 5 85 7.5E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS09910 ab2f166814265a2a652ab57e51933872 162 PANTHER PTHR34584:SF1 3 160 1.0E-35 T 22-04-2016 SCD_RS09910 ab2f166814265a2a652ab57e51933872 162 PIRSF PIRSF019239 1 162 3.2E-43 T 22-04-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 SCD_RS09910 ab2f166814265a2a652ab57e51933872 162 Pfam PF01899 Na+/H+ ion antiporter subunit 12 159 7.2E-42 T 22-04-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 SCD_RS09910 ab2f166814265a2a652ab57e51933872 162 PANTHER PTHR34584 3 160 1.0E-35 T 22-04-2016 SCD_RS09010 3ec82654f9b95d8bc46991f8b637a578 469 PANTHER PTHR11807 24 456 8.5E-76 T 22-04-2016 SCD_RS09010 3ec82654f9b95d8bc46991f8b637a578 469 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 12 315 24.097 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SCD_RS09010 3ec82654f9b95d8bc46991f8b637a578 469 Pfam PF09179 TilS substrate binding domain 256 323 2.0E-23 T 22-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SCD_RS09010 3ec82654f9b95d8bc46991f8b637a578 469 Pfam PF11734 TilS substrate C-terminal domain 392 461 3.8E-26 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SCD_RS09010 3ec82654f9b95d8bc46991f8b637a578 469 Gene3D G3DSA:3.40.50.620 28 188 4.9E-10 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS09010 3ec82654f9b95d8bc46991f8b637a578 469 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 30 212 2.2E-51 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SCD_RS09010 3ec82654f9b95d8bc46991f8b637a578 469 SUPERFAMILY SSF52402 21 241 6.4E-57 T 22-04-2016 SCD_RS09010 3ec82654f9b95d8bc46991f8b637a578 469 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 392 437 8.6E-17 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SCD_RS09010 3ec82654f9b95d8bc46991f8b637a578 469 SUPERFAMILY SSF56037 349 463 2.88E-29 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SCD_RS09010 3ec82654f9b95d8bc46991f8b637a578 469 PANTHER PTHR11807:SF2 24 456 8.5E-76 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SCD_RS09010 3ec82654f9b95d8bc46991f8b637a578 469 SUPERFAMILY SSF82829 242 326 1.03E-23 T 22-04-2016 SCD_RS09010 3ec82654f9b95d8bc46991f8b637a578 469 SMART SM00977 392 465 1.9E-27 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SCD_RS09010 3ec82654f9b95d8bc46991f8b637a578 469 Pfam PF01171 PP-loop family 30 208 2.0E-52 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal SCD_RS14430 50c29bc1889468d1eb8470decbf018ca 320 PANTHER PTHR30160:SF8 3 287 2.1E-82 T 22-04-2016 SCD_RS14430 50c29bc1889468d1eb8470decbf018ca 320 Gene3D G3DSA:3.40.50.2000 3 158 2.3E-31 T 22-04-2016 SCD_RS14430 50c29bc1889468d1eb8470decbf018ca 320 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 79 294 9.6E-49 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 SCD_RS14430 50c29bc1889468d1eb8470decbf018ca 320 Gene3D G3DSA:3.40.50.2000 175 289 9.1E-27 T 22-04-2016 SCD_RS14430 50c29bc1889468d1eb8470decbf018ca 320 PANTHER PTHR30160 3 287 2.1E-82 T 22-04-2016 SCD_RS14430 50c29bc1889468d1eb8470decbf018ca 320 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 3 316 2.9E-111 T 22-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 SCD_RS14430 50c29bc1889468d1eb8470decbf018ca 320 SUPERFAMILY SSF53756 3 298 2.57E-61 T 22-04-2016 SCD_RS03305 0ad52d422fa13b776844b4ea9522296b 150 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SCD_RS03305 0ad52d422fa13b776844b4ea9522296b 150 Gene3D G3DSA:3.90.79.10 6 143 1.1E-30 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SCD_RS03305 0ad52d422fa13b776844b4ea9522296b 150 PANTHER PTHR22769 6 142 7.1E-32 T 22-04-2016 SCD_RS03305 0ad52d422fa13b776844b4ea9522296b 150 PRINTS PR01404 DATP pyrophosphohydrolase signature 127 140 6.6E-13 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 SCD_RS03305 0ad52d422fa13b776844b4ea9522296b 150 PRINTS PR01404 DATP pyrophosphohydrolase signature 70 89 6.6E-13 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 SCD_RS03305 0ad52d422fa13b776844b4ea9522296b 150 PRINTS PR01404 DATP pyrophosphohydrolase signature 21 42 6.6E-13 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 SCD_RS03305 0ad52d422fa13b776844b4ea9522296b 150 SUPERFAMILY SSF55811 7 143 1.49E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SCD_RS03305 0ad52d422fa13b776844b4ea9522296b 150 Pfam PF00293 NUDIX domain 8 137 1.7E-20 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SCD_RS03305 0ad52d422fa13b776844b4ea9522296b 150 PANTHER PTHR22769:SF28 6 142 7.1E-32 T 22-04-2016 SCD_RS11540 8781101234805be0f1a3f1767d7d36e5 322 PANTHER PTHR10366:SF399 10 320 5.4E-162 T 22-04-2016 SCD_RS11540 8781101234805be0f1a3f1767d7d36e5 322 Gene3D G3DSA:3.90.25.10 177 317 1.4E-53 T 22-04-2016 SCD_RS11540 8781101234805be0f1a3f1767d7d36e5 322 PANTHER PTHR10366 10 320 5.4E-162 T 22-04-2016 SCD_RS11540 8781101234805be0f1a3f1767d7d36e5 322 SUPERFAMILY SSF51735 6 318 1.4E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS11540 8781101234805be0f1a3f1767d7d36e5 322 Pfam PF16363 GDP-mannose 4,6 dehydratase 12 309 1.1E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS11540 8781101234805be0f1a3f1767d7d36e5 322 Gene3D G3DSA:3.40.50.720 6 176 3.7E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS12330 051078450c3755117404fdb297dad9c1 147 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 146 7.5E-41 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SCD_RS12330 051078450c3755117404fdb297dad9c1 147 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 133 2.0E-50 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SCD_RS12330 051078450c3755117404fdb297dad9c1 147 PANTHER PTHR34701 2 138 2.4E-49 T 22-04-2016 SCD_RS12330 051078450c3755117404fdb297dad9c1 147 SUPERFAMILY SSF89447 1 133 1.57E-41 T 22-04-2016 SCD_RS12330 051078450c3755117404fdb297dad9c1 147 Pfam PF02381 MraZ protein, putative antitoxin-like 1 71 1.3E-14 T 22-04-2016 IPR020603 MraZ domain SCD_RS12330 051078450c3755117404fdb297dad9c1 147 Pfam PF02381 MraZ protein, putative antitoxin-like 76 131 3.9E-15 T 22-04-2016 IPR020603 MraZ domain SCD_RS12330 051078450c3755117404fdb297dad9c1 147 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 147 51.927 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SCD_RS04065 f7d95ecb6f0249f35e69d0ab952c8178 565 Gene3D G3DSA:3.40.50.970 356 556 1.1E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS04065 f7d95ecb6f0249f35e69d0ab952c8178 565 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 328 2.6E-45 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SCD_RS04065 f7d95ecb6f0249f35e69d0ab952c8178 565 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 392 539 2.0E-48 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SCD_RS04065 f7d95ecb6f0249f35e69d0ab952c8178 565 SUPERFAMILY SSF52518 370 563 1.83E-68 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS04065 f7d95ecb6f0249f35e69d0ab952c8178 565 Gene3D G3DSA:3.40.50.970 2 177 1.3E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS04065 f7d95ecb6f0249f35e69d0ab952c8178 565 SUPERFAMILY SSF52518 2 181 1.66E-64 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS04065 f7d95ecb6f0249f35e69d0ab952c8178 565 PANTHER PTHR18968 1 564 0.0 T 22-04-2016 SCD_RS04065 f7d95ecb6f0249f35e69d0ab952c8178 565 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 3 564 1.7E-258 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SCD_RS04065 f7d95ecb6f0249f35e69d0ab952c8178 565 Gene3D G3DSA:3.40.50.1220 187 355 6.1E-65 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SCD_RS04065 f7d95ecb6f0249f35e69d0ab952c8178 565 PANTHER PTHR18968:SF116 1 564 0.0 T 22-04-2016 SCD_RS04065 f7d95ecb6f0249f35e69d0ab952c8178 565 SUPERFAMILY SSF52467 186 360 4.91E-63 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SCD_RS04065 f7d95ecb6f0249f35e69d0ab952c8178 565 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 169 3.6E-57 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SCD_RS05135 e9833bdf2e6fb4a5459f66f4d080b4f9 399 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 6 386 34.413 T 22-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 SCD_RS05135 e9833bdf2e6fb4a5459f66f4d080b4f9 399 Gene3D G3DSA:1.25.40.10 40 123 2.5E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS05135 e9833bdf2e6fb4a5459f66f4d080b4f9 399 Pfam PF13432 Tetratricopeptide repeat 42 90 0.018 T 22-04-2016 SCD_RS05135 e9833bdf2e6fb4a5459f66f4d080b4f9 399 SUPERFAMILY SSF81901 40 247 1.18E-13 T 22-04-2016 SCD_RS05135 e9833bdf2e6fb4a5459f66f4d080b4f9 399 SMART SM00028 70 103 140.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS05135 e9833bdf2e6fb4a5459f66f4d080b4f9 399 SMART SM00028 180 213 23.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS05135 e9833bdf2e6fb4a5459f66f4d080b4f9 399 SMART SM00028 36 69 210.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS05135 e9833bdf2e6fb4a5459f66f4d080b4f9 399 SMART SM00028 214 247 65.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS05135 e9833bdf2e6fb4a5459f66f4d080b4f9 399 SMART SM00028 108 141 390.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS05135 e9833bdf2e6fb4a5459f66f4d080b4f9 399 PANTHER PTHR23083 11 254 5.7E-16 T 22-04-2016 SCD_RS05135 e9833bdf2e6fb4a5459f66f4d080b4f9 399 PANTHER PTHR23083 350 355 5.7E-16 T 22-04-2016 SCD_RS05135 e9833bdf2e6fb4a5459f66f4d080b4f9 399 Gene3D G3DSA:1.25.40.10 124 245 3.4E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS13100 1fe467e36dc2244eb1a5bd7680d2e4a3 477 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 206 261 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS13100 1fe467e36dc2244eb1a5bd7680d2e4a3 477 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 444 1.5E-118 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS13100 1fe467e36dc2244eb1a5bd7680d2e4a3 477 PANTHER PTHR10422:SF21 10 465 1.3E-268 T 22-04-2016 SCD_RS13100 1fe467e36dc2244eb1a5bd7680d2e4a3 477 PANTHER PTHR10422 10 465 1.3E-268 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS13100 1fe467e36dc2244eb1a5bd7680d2e4a3 477 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 11 469 4.3E-222 T 22-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS13100 1fe467e36dc2244eb1a5bd7680d2e4a3 477 SUPERFAMILY SSF81442 12 468 6.41E-128 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS13100 1fe467e36dc2244eb1a5bd7680d2e4a3 477 Gene3D G3DSA:1.20.210.10 12 467 4.6E-73 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS15000 df7a661990f28046c99127e1d751bcd8 213 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 15 203 28.258 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SCD_RS15000 df7a661990f28046c99127e1d751bcd8 213 Pfam PF02527 rRNA small subunit methyltransferase G 24 202 4.6E-60 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SCD_RS15000 df7a661990f28046c99127e1d751bcd8 213 SUPERFAMILY SSF53335 5 208 2.76E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS15000 df7a661990f28046c99127e1d751bcd8 213 PANTHER PTHR31760:SF0 10 205 2.3E-71 T 22-04-2016 SCD_RS15000 df7a661990f28046c99127e1d751bcd8 213 PANTHER PTHR31760 10 205 2.3E-71 T 22-04-2016 SCD_RS15000 df7a661990f28046c99127e1d751bcd8 213 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 27 204 1.3E-59 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SCD_RS15000 df7a661990f28046c99127e1d751bcd8 213 PIRSF PIRSF003078 4 209 9.1E-59 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SCD_RS15000 df7a661990f28046c99127e1d751bcd8 213 Gene3D G3DSA:3.40.50.150 7 207 2.2E-67 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS13440 13dd6711b865da39921b9d4efabeb980 356 TIGRFAM TIGR02066 dsrB: sulfite reductase, dissimilatory-type beta subunit 22 356 2.6E-158 T 22-04-2016 IPR011808 Sulphite reductase, dissimilatory-type beta subunit GO:0006790|GO:0009055|GO:0018551|GO:0051539 KEGG: 00920+1.8.99.5|MetaCyc: PWY-5306|MetaCyc: PWY-5360 SCD_RS13440 13dd6711b865da39921b9d4efabeb980 356 SUPERFAMILY SSF56014 256 342 3.92E-33 T 22-04-2016 SCD_RS13440 13dd6711b865da39921b9d4efabeb980 356 SUPERFAMILY SSF56014 116 189 3.92E-33 T 22-04-2016 SCD_RS13440 13dd6711b865da39921b9d4efabeb980 356 PANTHER PTHR11493 249 347 1.8E-73 T 22-04-2016 SCD_RS13440 13dd6711b865da39921b9d4efabeb980 356 PANTHER PTHR11493 5 186 1.8E-73 T 22-04-2016 SCD_RS13440 13dd6711b865da39921b9d4efabeb980 356 PANTHER PTHR11493:SF51 249 347 1.8E-73 T 22-04-2016 SCD_RS13440 13dd6711b865da39921b9d4efabeb980 356 PANTHER PTHR11493:SF51 5 186 1.8E-73 T 22-04-2016 SCD_RS13440 13dd6711b865da39921b9d4efabeb980 356 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 234 245 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS13440 13dd6711b865da39921b9d4efabeb980 356 Gene3D G3DSA:3.30.413.10 256 328 4.4E-14 T 22-04-2016 SCD_RS13440 13dd6711b865da39921b9d4efabeb980 356 Gene3D G3DSA:3.30.413.10 133 189 4.4E-14 T 22-04-2016 SCD_RS13440 13dd6711b865da39921b9d4efabeb980 356 Gene3D G3DSA:3.30.70.20 197 247 1.3E-6 T 22-04-2016 SCD_RS13440 13dd6711b865da39921b9d4efabeb980 356 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 118 335 1.2E-24 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SCD_RS13440 13dd6711b865da39921b9d4efabeb980 356 SUPERFAMILY SSF54862 168 246 2.3E-7 T 22-04-2016 SCD_RS13440 13dd6711b865da39921b9d4efabeb980 356 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 45 109 9.2E-11 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SCD_RS13440 13dd6711b865da39921b9d4efabeb980 356 SUPERFAMILY SSF55124 7 124 2.04E-46 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SCD_RS13440 13dd6711b865da39921b9d4efabeb980 356 Gene3D G3DSA:3.90.480.10 66 132 1.0E-8 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SCD_RS14475 a475e401b0fd5651b7c68adb7f92843d 121 SUPERFAMILY SSF52172 5 120 4.41E-39 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS14475 a475e401b0fd5651b7c68adb7f92843d 121 Gene3D G3DSA:3.40.50.2300 5 120 1.7E-41 T 22-04-2016 SCD_RS14475 a475e401b0fd5651b7c68adb7f92843d 121 PANTHER PTHR26402 4 120 3.1E-45 T 22-04-2016 SCD_RS14475 a475e401b0fd5651b7c68adb7f92843d 121 SMART SM00448 4 117 4.7E-42 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS14475 a475e401b0fd5651b7c68adb7f92843d 121 Pfam PF00072 Response regulator receiver domain 6 117 2.9E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS13695 f6ffc6aee1243abe85baa4fe5f1eaaf1 96 Pfam PF00550 Phosphopantetheine attachment site 29 90 2.1E-7 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SCD_RS13695 f6ffc6aee1243abe85baa4fe5f1eaaf1 96 Gene3D G3DSA:1.10.1200.10 14 93 2.4E-15 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SCD_RS13695 f6ffc6aee1243abe85baa4fe5f1eaaf1 96 SUPERFAMILY SSF47336 12 93 2.22E-10 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SCD_RS10425 bd5a21a4c3ef1366f02e0395075fdac4 85 Pfam PF01016 Ribosomal L27 protein 2 80 3.0E-35 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS10425 bd5a21a4c3ef1366f02e0395075fdac4 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 6.0E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS10425 bd5a21a4c3ef1366f02e0395075fdac4 85 Gene3D G3DSA:2.40.50.100 20 82 2.5E-28 T 22-04-2016 SCD_RS10425 bd5a21a4c3ef1366f02e0395075fdac4 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 6.2E-35 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS10425 bd5a21a4c3ef1366f02e0395075fdac4 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 6.2E-35 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS10425 bd5a21a4c3ef1366f02e0395075fdac4 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 6.2E-35 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS10425 bd5a21a4c3ef1366f02e0395075fdac4 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS10425 bd5a21a4c3ef1366f02e0395075fdac4 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 26.746 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS10425 bd5a21a4c3ef1366f02e0395075fdac4 85 PANTHER PTHR15893 1 69 1.3E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS10425 bd5a21a4c3ef1366f02e0395075fdac4 85 SUPERFAMILY SSF110324 2 82 1.39E-31 T 22-04-2016 SCD_RS10425 bd5a21a4c3ef1366f02e0395075fdac4 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 73 1.0E-13 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS10895 0ba11172ec0b73f02c716f00e3616040 223 Hamap MF_00801 Endonuclease V [nfi]. 12 222 31.924 T 22-04-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 SCD_RS10895 0ba11172ec0b73f02c716f00e3616040 223 PANTHER PTHR28511:SF1 15 218 1.3E-74 T 22-04-2016 SCD_RS10895 0ba11172ec0b73f02c716f00e3616040 223 Pfam PF04493 Endonuclease V 22 215 6.3E-72 T 22-04-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 SCD_RS10895 0ba11172ec0b73f02c716f00e3616040 223 PANTHER PTHR28511 15 218 1.3E-74 T 22-04-2016 SCD_RS14485 1af330086fab1b518d1ff725d32c43d3 279 SUPERFAMILY SSF53613 7 270 2.65E-69 T 22-04-2016 IPR029056 Ribokinase-like SCD_RS14485 1af330086fab1b518d1ff725d32c43d3 279 Gene3D G3DSA:3.40.1190.20 9 266 1.2E-78 T 22-04-2016 IPR029056 Ribokinase-like SCD_RS14485 1af330086fab1b518d1ff725d32c43d3 279 Pfam PF08543 Phosphomethylpyrimidine kinase 18 261 4.5E-75 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 SCD_RS14485 1af330086fab1b518d1ff725d32c43d3 279 PANTHER PTHR20858 1 260 9.5E-76 T 22-04-2016 SCD_RS14485 1af330086fab1b518d1ff725d32c43d3 279 PANTHER PTHR20858:SF17 1 260 9.5E-76 T 22-04-2016 SCD_RS07490 48e3937ab5e2b1eee4a81cf95c7ca4db 198 PANTHER PTHR30446:SF0 1 198 1.4E-103 T 22-04-2016 SCD_RS07490 48e3937ab5e2b1eee4a81cf95c7ca4db 198 SUPERFAMILY SSF111304 4 198 8.37E-76 T 22-04-2016 IPR023627 Recombination protein RecR SCD_RS07490 48e3937ab5e2b1eee4a81cf95c7ca4db 198 Pfam PF13662 Toprim domain 81 171 1.1E-23 T 22-04-2016 IPR006171 Toprim domain SCD_RS07490 48e3937ab5e2b1eee4a81cf95c7ca4db 198 TIGRFAM TIGR00615 recR: recombination protein RecR 3 196 3.8E-75 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SCD_RS07490 48e3937ab5e2b1eee4a81cf95c7ca4db 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 102.207 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SCD_RS07490 48e3937ab5e2b1eee4a81cf95c7ca4db 198 Pfam PF02132 RecR protein 40 77 2.3E-13 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger SCD_RS07490 48e3937ab5e2b1eee4a81cf95c7ca4db 198 PANTHER PTHR30446 1 198 1.4E-103 T 22-04-2016 SCD_RS07490 48e3937ab5e2b1eee4a81cf95c7ca4db 198 SMART SM00493 80 165 2.3E-12 T 22-04-2016 IPR006171 Toprim domain SCD_RS09150 98fd91b45614cc47a727cbf06969b91f 386 Gene3D G3DSA:3.30.1490.20 22 95 5.7E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SCD_RS09150 98fd91b45614cc47a727cbf06969b91f 386 Pfam PF00549 CoA-ligase 262 382 9.3E-27 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SCD_RS09150 98fd91b45614cc47a727cbf06969b91f 386 Gene3D G3DSA:3.30.470.20 96 238 3.6E-52 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SCD_RS09150 98fd91b45614cc47a727cbf06969b91f 386 PIRSF PIRSF001554 1 386 1.0E-150 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SCD_RS09150 98fd91b45614cc47a727cbf06969b91f 386 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SCD_RS09150 98fd91b45614cc47a727cbf06969b91f 386 SUPERFAMILY SSF56059 1 236 2.95E-75 T 22-04-2016 SCD_RS09150 98fd91b45614cc47a727cbf06969b91f 386 PANTHER PTHR11815 1 386 4.1E-212 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SCD_RS09150 98fd91b45614cc47a727cbf06969b91f 386 Gene3D G3DSA:3.40.50.261 241 383 1.1E-65 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SCD_RS09150 98fd91b45614cc47a727cbf06969b91f 386 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 40.682 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SCD_RS09150 98fd91b45614cc47a727cbf06969b91f 386 PANTHER PTHR11815:SF1 1 386 4.1E-212 T 22-04-2016 SCD_RS09150 98fd91b45614cc47a727cbf06969b91f 386 SUPERFAMILY SSF52210 240 385 1.27E-54 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SCD_RS09150 98fd91b45614cc47a727cbf06969b91f 386 Pfam PF08442 ATP-grasp domain 2 202 3.9E-74 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SCD_RS09150 98fd91b45614cc47a727cbf06969b91f 386 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.0E-162 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SCD_RS12045 fddbb2c008c03f68a1b3bd0019fb6a64 198 SUPERFAMILY SSF159594 24 192 1.18E-31 T 22-04-2016 SCD_RS12045 fddbb2c008c03f68a1b3bd0019fb6a64 198 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 27 187 1.7E-40 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component SCD_RS12045 fddbb2c008c03f68a1b3bd0019fb6a64 198 Gene3D G3DSA:3.40.50.10610 16 195 2.4E-25 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component SCD_RS13510 c35e1070d301e18ad76cd9df02ab8c38 153 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 12 143 1.7E-61 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SCD_RS13510 c35e1070d301e18ad76cd9df02ab8c38 153 PANTHER PTHR10173 14 145 4.0E-53 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SCD_RS13510 c35e1070d301e18ad76cd9df02ab8c38 153 PANTHER PTHR10173:SF18 14 145 4.0E-53 T 22-04-2016 SCD_RS13510 c35e1070d301e18ad76cd9df02ab8c38 153 Pfam PF01641 SelR domain 15 134 7.3E-49 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SCD_RS13510 c35e1070d301e18ad76cd9df02ab8c38 153 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 4 135 35.598 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SCD_RS13510 c35e1070d301e18ad76cd9df02ab8c38 153 Gene3D G3DSA:2.170.150.20 10 150 1.4E-60 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SCD_RS13510 c35e1070d301e18ad76cd9df02ab8c38 153 SUPERFAMILY SSF51316 12 151 3.77E-60 T 22-04-2016 IPR011057 Mss4-like SCD_RS00325 ae31ab962b0a666cb20b3e1a14145597 447 PANTHER PTHR33525 44 398 7.8E-62 T 22-04-2016 SCD_RS00325 ae31ab962b0a666cb20b3e1a14145597 447 PIRSF PIRSF003180 42 447 1.0E-92 T 22-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing SCD_RS00325 ae31ab962b0a666cb20b3e1a14145597 447 Gene3D G3DSA:1.10.3150.10 225 399 9.4E-26 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS00325 ae31ab962b0a666cb20b3e1a14145597 447 Gene3D G3DSA:3.20.20.450 124 224 1.3E-7 T 22-04-2016 IPR001633 EAL domain SCD_RS00325 ae31ab962b0a666cb20b3e1a14145597 447 SMART SM00052 27 240 4.5E-4 T 22-04-2016 IPR001633 EAL domain SCD_RS00325 ae31ab962b0a666cb20b3e1a14145597 447 Pfam PF08668 HDOD domain 259 363 4.5E-10 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS00325 ae31ab962b0a666cb20b3e1a14145597 447 SUPERFAMILY SSF109604 226 444 8.47E-32 T 22-04-2016 SCD_RS00325 ae31ab962b0a666cb20b3e1a14145597 447 PANTHER PTHR33525:SF4 44 398 7.8E-62 T 22-04-2016 SCD_RS00325 ae31ab962b0a666cb20b3e1a14145597 447 SUPERFAMILY SSF141868 46 237 6.41E-20 T 22-04-2016 IPR001633 EAL domain SCD_RS00325 ae31ab962b0a666cb20b3e1a14145597 447 Pfam PF00563 EAL domain 50 232 5.3E-11 T 22-04-2016 IPR001633 EAL domain SCD_RS08825 40de18dd70b712bfbc0bc112206c9e48 474 Gene3D G3DSA:3.30.200.20 6 77 4.3E-23 T 22-04-2016 SCD_RS08825 40de18dd70b712bfbc0bc112206c9e48 474 SMART SM00220 9 271 3.2E-67 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SCD_RS08825 40de18dd70b712bfbc0bc112206c9e48 474 Pfam PF00069 Protein kinase domain 9 259 4.3E-56 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SCD_RS08825 40de18dd70b712bfbc0bc112206c9e48 474 Gene3D G3DSA:1.10.510.10 78 283 8.3E-53 T 22-04-2016 SCD_RS08825 40de18dd70b712bfbc0bc112206c9e48 474 PANTHER PTHR24362 6 320 7.9E-102 T 22-04-2016 SCD_RS08825 40de18dd70b712bfbc0bc112206c9e48 474 PANTHER PTHR24362 351 420 7.9E-102 T 22-04-2016 SCD_RS08825 40de18dd70b712bfbc0bc112206c9e48 474 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 15 38 - T 22-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 SCD_RS08825 40de18dd70b712bfbc0bc112206c9e48 474 PANTHER PTHR24362:SF160 6 320 7.9E-102 T 22-04-2016 SCD_RS08825 40de18dd70b712bfbc0bc112206c9e48 474 PANTHER PTHR24362:SF160 351 420 7.9E-102 T 22-04-2016 SCD_RS08825 40de18dd70b712bfbc0bc112206c9e48 474 SUPERFAMILY SSF56112 6 275 2.56E-76 T 22-04-2016 IPR011009 Protein kinase-like domain SCD_RS08825 40de18dd70b712bfbc0bc112206c9e48 474 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 130 142 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 SCD_RS12945 dc1db8e399a7bf26d78e68b97b4ba989 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 7.9E-39 T 22-04-2016 IPR013029 Domain of unknown function DUF933 SCD_RS12945 dc1db8e399a7bf26d78e68b97b4ba989 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 43.434 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SCD_RS12945 dc1db8e399a7bf26d78e68b97b4ba989 363 Gene3D G3DSA:3.40.50.300 201 267 5.1E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12945 dc1db8e399a7bf26d78e68b97b4ba989 363 Gene3D G3DSA:3.40.50.300 4 130 5.1E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12945 dc1db8e399a7bf26d78e68b97b4ba989 363 SUPERFAMILY SSF52540 3 301 4.12E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12945 dc1db8e399a7bf26d78e68b97b4ba989 363 PIRSF PIRSF006641 1 363 5.6E-153 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SCD_RS12945 dc1db8e399a7bf26d78e68b97b4ba989 363 Gene3D G3DSA:1.10.150.300 131 200 2.2E-26 T 22-04-2016 IPR023192 TGS-like domain SCD_RS12945 dc1db8e399a7bf26d78e68b97b4ba989 363 Pfam PF01926 50S ribosome-binding GTPase 5 125 4.5E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS12945 dc1db8e399a7bf26d78e68b97b4ba989 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 3.5E-156 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SCD_RS12945 dc1db8e399a7bf26d78e68b97b4ba989 363 Gene3D G3DSA:3.10.20.30 268 363 5.4E-50 T 22-04-2016 IPR012675 Beta-grasp domain SCD_RS12945 dc1db8e399a7bf26d78e68b97b4ba989 363 PANTHER PTHR23305:SF12 1 363 1.0E-200 T 22-04-2016 SCD_RS12945 dc1db8e399a7bf26d78e68b97b4ba989 363 SUPERFAMILY SSF81271 279 359 4.58E-35 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SCD_RS12945 dc1db8e399a7bf26d78e68b97b4ba989 363 PANTHER PTHR23305 1 363 1.0E-200 T 22-04-2016 SCD_RS12945 dc1db8e399a7bf26d78e68b97b4ba989 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 6.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS12945 dc1db8e399a7bf26d78e68b97b4ba989 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS12945 dc1db8e399a7bf26d78e68b97b4ba989 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 6.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS12945 dc1db8e399a7bf26d78e68b97b4ba989 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 6.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS02010 378e32fb6bcb1fa34b77c09fb4091e9c 236 SUPERFAMILY SSF46894 134 230 6.24E-30 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SCD_RS02010 378e32fb6bcb1fa34b77c09fb4091e9c 236 Gene3D G3DSA:1.10.10.10 135 232 2.9E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS02010 378e32fb6bcb1fa34b77c09fb4091e9c 236 Pfam PF00072 Response regulator receiver domain 8 117 8.6E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS02010 378e32fb6bcb1fa34b77c09fb4091e9c 236 PANTHER PTHR26402 6 232 2.6E-97 T 22-04-2016 SCD_RS02010 378e32fb6bcb1fa34b77c09fb4091e9c 236 Gene3D G3DSA:3.40.50.2300 3 128 3.4E-40 T 22-04-2016 SCD_RS02010 378e32fb6bcb1fa34b77c09fb4091e9c 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 229 3.9E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SCD_RS02010 378e32fb6bcb1fa34b77c09fb4091e9c 236 PANTHER PTHR26402:SF292 6 232 2.6E-97 T 22-04-2016 SCD_RS02010 378e32fb6bcb1fa34b77c09fb4091e9c 236 SUPERFAMILY SSF52172 4 130 9.25E-42 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS02010 378e32fb6bcb1fa34b77c09fb4091e9c 236 SMART SM00862 153 229 5.7E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SCD_RS02010 378e32fb6bcb1fa34b77c09fb4091e9c 236 SMART SM00448 6 116 3.6E-42 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS10700 3651db16f4ee018eadb4a3b6f452db0e 81 PANTHER PTHR13680 5 81 1.9E-24 T 22-04-2016 SCD_RS10700 3651db16f4ee018eadb4a3b6f452db0e 81 Pfam PF09360 Iron-binding zinc finger CDGSH type 16 43 8.8E-11 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 SCD_RS10700 3651db16f4ee018eadb4a3b6f452db0e 81 PANTHER PTHR13680:SF22 5 81 1.9E-24 T 22-04-2016 SCD_RS10700 3651db16f4ee018eadb4a3b6f452db0e 81 SMART SM00704 11 48 1.1E-14 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 SCD_RS10700 3651db16f4ee018eadb4a3b6f452db0e 81 SMART SM00704 49 80 1.7 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 SCD_RS00295 7a1378ab05a9285823c37ba285e31784 223 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 7 217 5.8E-44 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 SCD_RS00295 7a1378ab05a9285823c37ba285e31784 223 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 68 1.6E-9 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SCD_RS00295 7a1378ab05a9285823c37ba285e31784 223 PANTHER PTHR12039 5 222 4.8E-47 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 SCD_RS00295 7a1378ab05a9285823c37ba285e31784 223 Gene3D G3DSA:3.40.50.620 5 219 2.6E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS00295 7a1378ab05a9285823c37ba285e31784 223 Pfam PF01467 Cytidylyltransferase-like 7 190 2.2E-24 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SCD_RS00295 7a1378ab05a9285823c37ba285e31784 223 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 3 218 29.996 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 SCD_RS00295 7a1378ab05a9285823c37ba285e31784 223 SUPERFAMILY SSF52374 4 220 6.76E-49 T 22-04-2016 SCD_RS06545 1a86db838fbeb8c5ad1fbc2f76d6a773 159 Gene3D G3DSA:3.55.40.10 40 119 1.3E-11 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 SCD_RS06545 1a86db838fbeb8c5ad1fbc2f76d6a773 159 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS06545 1a86db838fbeb8c5ad1fbc2f76d6a773 159 PRINTS PR00885 Bacterial general secretion pathway protein H signature 19 33 1.9E-7 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 SCD_RS06545 1a86db838fbeb8c5ad1fbc2f76d6a773 159 PRINTS PR00885 Bacterial general secretion pathway protein H signature 4 18 1.9E-7 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 SCD_RS06545 1a86db838fbeb8c5ad1fbc2f76d6a773 159 PRINTS PR00885 Bacterial general secretion pathway protein H signature 119 134 1.9E-7 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 SCD_RS06545 1a86db838fbeb8c5ad1fbc2f76d6a773 159 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 5.4E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS06545 1a86db838fbeb8c5ad1fbc2f76d6a773 159 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 5 155 1.4E-27 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 SCD_RS06545 1a86db838fbeb8c5ad1fbc2f76d6a773 159 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 5 28 6.4E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS06545 1a86db838fbeb8c5ad1fbc2f76d6a773 159 SUPERFAMILY SSF54523 9 92 1.65E-11 T 22-04-2016 SCD_RS06545 1a86db838fbeb8c5ad1fbc2f76d6a773 159 Pfam PF12019 Type II transport protein GspH 43 145 5.5E-8 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 SCD_RS07305 cc1376ee49d7017c27ad3d7b071bf08e 297 PANTHER PTHR30007 5 257 1.7E-71 T 22-04-2016 SCD_RS07305 cc1376ee49d7017c27ad3d7b071bf08e 297 PANTHER PTHR30007:SF4 5 257 1.7E-71 T 22-04-2016 SCD_RS07305 cc1376ee49d7017c27ad3d7b071bf08e 297 Pfam PF02811 PHP domain 6 187 8.2E-10 T 22-04-2016 IPR004013 PHP domain GO:0003824 SCD_RS07305 cc1376ee49d7017c27ad3d7b071bf08e 297 Gene3D G3DSA:3.20.20.140 5 87 1.0E-40 T 22-04-2016 SCD_RS07305 cc1376ee49d7017c27ad3d7b071bf08e 297 Gene3D G3DSA:3.20.20.140 158 257 1.0E-40 T 22-04-2016 SCD_RS07305 cc1376ee49d7017c27ad3d7b071bf08e 297 SUPERFAMILY SSF89550 4 83 4.05E-50 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SCD_RS07305 cc1376ee49d7017c27ad3d7b071bf08e 297 SUPERFAMILY SSF89550 166 280 4.05E-50 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SCD_RS07305 cc1376ee49d7017c27ad3d7b071bf08e 297 SMART SM00481 5 70 5.4E-21 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 SCD_RS13685 5516af53bfd693456685484f6c654f66 447 Gene3D G3DSA:3.30.300.30 341 440 3.6E-13 T 22-04-2016 SCD_RS13685 5516af53bfd693456685484f6c654f66 447 Pfam PF00501 AMP-binding enzyme 123 292 1.2E-16 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SCD_RS13685 5516af53bfd693456685484f6c654f66 447 PANTHER PTHR24096 111 298 1.8E-12 T 22-04-2016 SCD_RS13685 5516af53bfd693456685484f6c654f66 447 Pfam PF13193 AMP-binding enzyme C-terminal domain 359 428 1.3E-5 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SCD_RS13685 5516af53bfd693456685484f6c654f66 447 Gene3D G3DSA:3.40.50.980 132 289 1.6E-15 T 22-04-2016 SCD_RS13685 5516af53bfd693456685484f6c654f66 447 SUPERFAMILY SSF56801 10 440 1.09E-50 T 22-04-2016 SCD_RS11035 a620c278c32ee1be70c735558e1ad507 107 PANTHER PTHR11938 1 84 5.1E-37 T 22-04-2016 SCD_RS11035 a620c278c32ee1be70c735558e1ad507 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 107 6.0E-21 T 22-04-2016 IPR022569 Ferredoxin, C-terminal SCD_RS11035 a620c278c32ee1be70c735558e1ad507 107 Gene3D G3DSA:3.30.70.20 3 103 2.7E-20 T 22-04-2016 SCD_RS11035 a620c278c32ee1be70c735558e1ad507 107 Pfam PF00037 4Fe-4S binding domain 34 55 5.7E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS11035 a620c278c32ee1be70c735558e1ad507 107 PANTHER PTHR11938:SF101 1 84 5.1E-37 T 22-04-2016 SCD_RS11035 a620c278c32ee1be70c735558e1ad507 107 SUPERFAMILY SSF54862 3 105 5.87E-22 T 22-04-2016 SCD_RS11035 a620c278c32ee1be70c735558e1ad507 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 3.8E-12 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 SCD_RS11035 a620c278c32ee1be70c735558e1ad507 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 3.8E-12 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 SCD_RS11035 a620c278c32ee1be70c735558e1ad507 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 3.8E-12 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 SCD_RS11035 a620c278c32ee1be70c735558e1ad507 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS08455 f15ea87769f137fcdd206eadeb88411a 284 PANTHER PTHR10025 1 281 5.6E-162 T 22-04-2016 SCD_RS08455 f15ea87769f137fcdd206eadeb88411a 284 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SCD_RS08455 f15ea87769f137fcdd206eadeb88411a 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 2.0E-36 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SCD_RS08455 f15ea87769f137fcdd206eadeb88411a 284 Gene3D G3DSA:3.40.50.720 141 264 1.5E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS08455 f15ea87769f137fcdd206eadeb88411a 284 Gene3D G3DSA:3.40.192.10 7 140 1.8E-48 T 22-04-2016 SCD_RS08455 f15ea87769f137fcdd206eadeb88411a 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.461 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SCD_RS08455 f15ea87769f137fcdd206eadeb88411a 284 SUPERFAMILY SSF53223 3 122 6.04E-37 T 22-04-2016 SCD_RS08455 f15ea87769f137fcdd206eadeb88411a 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 282 2.8E-68 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SCD_RS08455 f15ea87769f137fcdd206eadeb88411a 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 2.0E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SCD_RS08455 f15ea87769f137fcdd206eadeb88411a 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 2.0E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SCD_RS08455 f15ea87769f137fcdd206eadeb88411a 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 2.0E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SCD_RS08455 f15ea87769f137fcdd206eadeb88411a 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 2.0E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SCD_RS08455 f15ea87769f137fcdd206eadeb88411a 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 2.0E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SCD_RS08455 f15ea87769f137fcdd206eadeb88411a 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 2.0E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SCD_RS08455 f15ea87769f137fcdd206eadeb88411a 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 2.0E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SCD_RS08455 f15ea87769f137fcdd206eadeb88411a 284 SUPERFAMILY SSF51735 123 282 2.65E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS08350 fae8f1870eb8366238a4f67c1b298a24 479 Pfam PF02321 Outer membrane efflux protein 63 249 5.1E-28 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SCD_RS08350 fae8f1870eb8366238a4f67c1b298a24 479 Pfam PF02321 Outer membrane efflux protein 281 459 7.6E-17 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SCD_RS08350 fae8f1870eb8366238a4f67c1b298a24 479 PANTHER PTHR30203 2 479 4.2E-143 T 22-04-2016 SCD_RS08350 fae8f1870eb8366238a4f67c1b298a24 479 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 461 1.7E-111 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 SCD_RS08350 fae8f1870eb8366238a4f67c1b298a24 479 PANTHER PTHR30203:SF3 2 479 4.2E-143 T 22-04-2016 SCD_RS08350 fae8f1870eb8366238a4f67c1b298a24 479 Gene3D G3DSA:1.20.1600.10 52 464 2.6E-109 T 22-04-2016 SCD_RS08350 fae8f1870eb8366238a4f67c1b298a24 479 SUPERFAMILY SSF56954 3 463 2.62E-104 T 22-04-2016 SCD_RS13265 ce2cf978f09b459aa72e416b163c6694 130 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.5E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS13265 ce2cf978f09b459aa72e416b163c6694 130 Pfam PF13633 Prokaryotic N-terminal methylation site 5 29 2.3E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS13265 ce2cf978f09b459aa72e416b163c6694 130 SUPERFAMILY SSF54523 7 113 1.88E-14 T 22-04-2016 SCD_RS13265 ce2cf978f09b459aa72e416b163c6694 130 Gene3D G3DSA:3.30.700.10 7 109 1.9E-10 T 22-04-2016 SCD_RS13265 ce2cf978f09b459aa72e416b163c6694 130 PANTHER PTHR30093:SF7 1 58 1.3E-18 T 22-04-2016 SCD_RS13265 ce2cf978f09b459aa72e416b163c6694 130 PANTHER PTHR30093 1 58 1.3E-18 T 22-04-2016 SCD_RS13265 ce2cf978f09b459aa72e416b163c6694 130 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS09200 7a1c03036d771e772c67d173debbaed3 243 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 110 229 9.1E-40 T 22-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 SCD_RS09200 7a1c03036d771e772c67d173debbaed3 243 PIRSF PIRSF037208 4 242 2.7E-87 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic SCD_RS09200 7a1c03036d771e772c67d173debbaed3 243 PANTHER PTHR21367 17 241 1.6E-54 T 22-04-2016 IPR030700 Arginine-tRNA-protein transferase SCD_RS09200 7a1c03036d771e772c67d173debbaed3 243 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 6 240 43.445 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic SCD_RS09200 7a1c03036d771e772c67d173debbaed3 243 PANTHER PTHR21367:SF0 17 241 1.6E-54 T 22-04-2016 SCD_RS09200 7a1c03036d771e772c67d173debbaed3 243 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 20 90 7.9E-18 T 22-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 SCD_RS09200 7a1c03036d771e772c67d173debbaed3 243 SUPERFAMILY SSF55729 85 239 4.72E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS00840 4382d780467dbed98b8d93e0d5c64507 319 SUPERFAMILY SSF64182 5 315 2.49E-47 T 22-04-2016 SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 Gene3D G3DSA:3.30.70.270 521 689 7.9E-59 T 22-04-2016 SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 516 679 4.0E-49 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 PANTHER PTHR10799:SF774 504 791 3.9E-98 T 22-04-2016 SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 Gene3D G3DSA:3.30.450.20 387 506 3.6E-28 T 22-04-2016 SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 Pfam PF00563 EAL domain 697 932 3.9E-77 T 22-04-2016 IPR001633 EAL domain SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 Pfam PF00990 Diguanylate cyclase, GGDEF domain 521 677 8.1E-50 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 PANTHER PTHR10799 504 791 3.9E-98 T 22-04-2016 SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 SMART SM00267 509 681 7.0E-63 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 SMART SM00304 206 258 1.2E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 SUPERFAMILY SSF55785 262 381 4.36E-14 T 22-04-2016 IPR000014 PAS domain SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 SMART SM00052 691 937 1.4E-137 T 22-04-2016 IPR001633 EAL domain SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 SMART SM00091 268 335 2.6E-7 T 22-04-2016 IPR000014 PAS domain SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 SMART SM00091 395 461 1.9E-7 T 22-04-2016 IPR000014 PAS domain SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 Gene3D G3DSA:3.20.20.450 694 944 5.3E-108 T 22-04-2016 IPR001633 EAL domain SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 Gene3D G3DSA:3.30.450.20 265 380 1.9E-13 T 22-04-2016 SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 SUPERFAMILY SSF55073 525 682 5.34E-50 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 266 390 1.1E-10 T 22-04-2016 IPR000014 PAS domain SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 393 516 2.2E-16 T 22-04-2016 IPR000014 PAS domain SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 Pfam PF00672 HAMP domain 194 251 8.8E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 Pfam PF08448 PAS fold 274 383 9.8E-7 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 Pfam PF08447 PAS fold 419 501 4.9E-18 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 SUPERFAMILY SSF141868 696 944 4.71E-97 T 22-04-2016 IPR001633 EAL domain SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 SUPERFAMILY SSF158472 207 256 4.97E-7 T 22-04-2016 SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 SMART SM00086 467 509 7.0E-10 T 22-04-2016 IPR001610 PAC motif SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 SMART SM00086 341 383 91.0 T 22-04-2016 IPR001610 PAC motif SCD_RS15855 3f08d5b75bd76035c27ad80218530a6f 966 SUPERFAMILY SSF55785 400 509 1.59E-25 T 22-04-2016 IPR000014 PAS domain SCD_RS02590 a9da35d81aeb21408ee02aa1e73238d7 212 SUPERFAMILY SSF55620 24 208 1.7E-55 T 22-04-2016 SCD_RS02590 a9da35d81aeb21408ee02aa1e73238d7 212 Gene3D G3DSA:3.30.1130.10 85 208 3.7E-34 T 22-04-2016 SCD_RS02590 a9da35d81aeb21408ee02aa1e73238d7 212 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 87 103 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SCD_RS02590 a9da35d81aeb21408ee02aa1e73238d7 212 PANTHER PTHR11109 68 205 6.2E-23 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SCD_RS02590 a9da35d81aeb21408ee02aa1e73238d7 212 Pfam PF01227 GTP cyclohydrolase I 31 207 1.7E-47 T 22-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SCD_RS02590 a9da35d81aeb21408ee02aa1e73238d7 212 Gene3D G3DSA:1.10.286.10 29 77 6.4E-4 T 22-04-2016 SCD_RS08550 ac654c7356e16ebd1666d72af8b71b6a 673 TIGRFAM TIGR02061 aprA: adenylylsulfate reductase, alpha subunit 16 662 3.7E-273 T 22-04-2016 IPR011803 Adenylylsulphate reductase, alpha subunit KEGG: 00920+1.8.99.2|MetaCyc: PWY-5278|MetaCyc: PWY-5279 SCD_RS08550 ac654c7356e16ebd1666d72af8b71b6a 673 PIRSF PIRSF000171 5 667 1.5E-252 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit SCD_RS08550 ac654c7356e16ebd1666d72af8b71b6a 673 SUPERFAMILY SSF46977 529 662 6.67E-39 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SCD_RS08550 ac654c7356e16ebd1666d72af8b71b6a 673 PANTHER PTHR11632 452 661 7.4E-227 T 22-04-2016 SCD_RS08550 ac654c7356e16ebd1666d72af8b71b6a 673 PANTHER PTHR11632 8 429 7.4E-227 T 22-04-2016 SCD_RS08550 ac654c7356e16ebd1666d72af8b71b6a 673 Gene3D G3DSA:3.50.50.60 10 134 4.2E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS08550 ac654c7356e16ebd1666d72af8b71b6a 673 Gene3D G3DSA:3.50.50.60 442 489 4.2E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS08550 ac654c7356e16ebd1666d72af8b71b6a 673 Gene3D G3DSA:3.50.50.60 177 267 4.2E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS08550 ac654c7356e16ebd1666d72af8b71b6a 673 SUPERFAMILY SSF51905 443 513 6.63E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS08550 ac654c7356e16ebd1666d72af8b71b6a 673 SUPERFAMILY SSF51905 10 284 6.63E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS08550 ac654c7356e16ebd1666d72af8b71b6a 673 PANTHER PTHR11632:SF57 452 661 7.4E-227 T 22-04-2016 SCD_RS08550 ac654c7356e16ebd1666d72af8b71b6a 673 PANTHER PTHR11632:SF57 8 429 7.4E-227 T 22-04-2016 SCD_RS08550 ac654c7356e16ebd1666d72af8b71b6a 673 Gene3D G3DSA:1.20.58.100 512 627 3.2E-42 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SCD_RS08550 ac654c7356e16ebd1666d72af8b71b6a 673 SUPERFAMILY SSF56425 266 411 1.05E-64 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SCD_RS08550 ac654c7356e16ebd1666d72af8b71b6a 673 Pfam PF00890 FAD binding domain 16 275 6.9E-8 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SCD_RS08550 ac654c7356e16ebd1666d72af8b71b6a 673 Gene3D G3DSA:3.90.700.10 271 403 5.4E-64 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 147 750 1.7E-181 T 22-04-2016 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 587 597 1.5E-27 T 22-04-2016 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 640 659 1.5E-27 T 22-04-2016 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 663 675 1.5E-27 T 22-04-2016 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 441 455 1.5E-27 T 22-04-2016 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 565 576 1.5E-27 T 22-04-2016 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 289 303 1.5E-27 T 22-04-2016 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 PRINTS PR00943 Copper-transporting ATPase signature 150 169 4.8E-13 T 22-04-2016 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 PRINTS PR00943 Copper-transporting ATPase signature 208 227 4.8E-13 T 22-04-2016 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 PRINTS PR00943 Copper-transporting ATPase signature 674 688 4.8E-13 T 22-04-2016 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 PRINTS PR00943 Copper-transporting ATPase signature 424 439 4.8E-13 T 22-04-2016 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 PRINTS PR00943 Copper-transporting ATPase signature 617 634 4.8E-13 T 22-04-2016 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 PRINTS PR00943 Copper-transporting ATPase signature 228 246 4.8E-13 T 22-04-2016 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 PRINTS PR00943 Copper-transporting ATPase signature 362 376 4.8E-13 T 22-04-2016 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 SUPERFAMILY SSF81665 689 728 6.15E-14 T 22-04-2016 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 SUPERFAMILY SSF81665 340 435 6.15E-14 T 22-04-2016 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 SUPERFAMILY SSF81665 207 242 6.15E-14 T 22-04-2016 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 210 718 5.1E-93 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 PANTHER PTHR24093 90 751 4.2E-237 T 22-04-2016 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 Gene3D G3DSA:3.40.50.1000 412 455 1.5E-56 T 22-04-2016 IPR023214 HAD-like domain SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 Gene3D G3DSA:3.40.50.1000 568 709 1.5E-56 T 22-04-2016 IPR023214 HAD-like domain SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 Pfam PF00122 E1-E2 ATPase 209 432 4.0E-65 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 Gene3D G3DSA:2.70.150.10 203 339 6.1E-29 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 SUPERFAMILY SSF56784 439 459 2.41E-59 T 22-04-2016 IPR023214 HAD-like domain SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 SUPERFAMILY SSF56784 498 747 2.41E-59 T 22-04-2016 IPR023214 HAD-like domain SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 166 749 6.3E-191 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 Pfam PF00702 haloacid dehalogenase-like hydrolase 437 653 1.5E-44 T 22-04-2016 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 SUPERFAMILY SSF81653 242 339 3.01E-26 T 22-04-2016 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 Gene3D G3DSA:3.40.1110.10 456 567 1.9E-24 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SCD_RS11075 0c0c0ed293cd1bcc47af06a9de6852a3 754 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 443 449 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site SCD_RS14505 875aaf92f1c991d23f3b6583538db708 417 Pfam PF13203 Putative metallopeptidase domain 7 286 9.8E-51 T 22-04-2016 IPR025154 Putative metallopeptidase domain SCD_RS14505 875aaf92f1c991d23f3b6583538db708 417 SUPERFAMILY SSF53300 288 394 2.43E-5 T 22-04-2016 IPR002035 von Willebrand factor, type A SCD_RS14505 875aaf92f1c991d23f3b6583538db708 417 PANTHER PTHR38730 5 414 6.1E-54 T 22-04-2016 SCD_RS14505 875aaf92f1c991d23f3b6583538db708 417 Pfam PF09967 VWA-like domain (DUF2201) 292 416 7.6E-24 T 22-04-2016 IPR018698 VWA-like domain SCD_RS14505 875aaf92f1c991d23f3b6583538db708 417 PANTHER PTHR38730:SF1 5 414 6.1E-54 T 22-04-2016 SCD_RS07035 0314e0fe6a901a3e26ea01debd6b1d0f 1025 SUPERFAMILY SSF82714 184 261 3.79E-7 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS07035 0314e0fe6a901a3e26ea01debd6b1d0f 1025 Pfam PF00873 AcrB/AcrD/AcrF family 3 1020 9.5E-169 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS07035 0314e0fe6a901a3e26ea01debd6b1d0f 1025 Gene3D G3DSA:3.30.70.1430 40 138 1.9E-20 T 22-04-2016 SCD_RS07035 0314e0fe6a901a3e26ea01debd6b1d0f 1025 Gene3D G3DSA:3.30.70.1320 267 296 6.9E-6 T 22-04-2016 SCD_RS07035 0314e0fe6a901a3e26ea01debd6b1d0f 1025 Gene3D G3DSA:3.30.70.1320 139 180 6.9E-6 T 22-04-2016 SCD_RS07035 0314e0fe6a901a3e26ea01debd6b1d0f 1025 SUPERFAMILY SSF82693 265 310 3.77E-9 T 22-04-2016 SCD_RS07035 0314e0fe6a901a3e26ea01debd6b1d0f 1025 PANTHER PTHR32063 1 1025 2.0E-219 T 22-04-2016 SCD_RS07035 0314e0fe6a901a3e26ea01debd6b1d0f 1025 Gene3D G3DSA:1.20.1640.10 297 496 1.2E-46 T 22-04-2016 SCD_RS07035 0314e0fe6a901a3e26ea01debd6b1d0f 1025 SUPERFAMILY SSF82866 830 1024 2.49E-38 T 22-04-2016 SCD_RS07035 0314e0fe6a901a3e26ea01debd6b1d0f 1025 SUPERFAMILY SSF82866 291 488 6.67E-39 T 22-04-2016 SCD_RS07035 0314e0fe6a901a3e26ea01debd6b1d0f 1025 SUPERFAMILY SSF82714 720 799 1.57E-5 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS07035 0314e0fe6a901a3e26ea01debd6b1d0f 1025 Gene3D G3DSA:3.30.2090.10 183 248 9.2E-5 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS07035 0314e0fe6a901a3e26ea01debd6b1d0f 1025 SUPERFAMILY SSF82693 39 129 1.92E-17 T 22-04-2016 SCD_RS07035 0314e0fe6a901a3e26ea01debd6b1d0f 1025 Gene3D G3DSA:1.10.3850.10 828 1023 7.2E-42 T 22-04-2016 SCD_RS07035 0314e0fe6a901a3e26ea01debd6b1d0f 1025 SUPERFAMILY SSF82693 147 183 3.77E-9 T 22-04-2016 SCD_RS07035 0314e0fe6a901a3e26ea01debd6b1d0f 1025 PRINTS PR00702 Acriflavin resistance protein family signature 381 405 2.1E-35 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS07035 0314e0fe6a901a3e26ea01debd6b1d0f 1025 PRINTS PR00702 Acriflavin resistance protein family signature 326 349 2.1E-35 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS07035 0314e0fe6a901a3e26ea01debd6b1d0f 1025 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 2.1E-35 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS07035 0314e0fe6a901a3e26ea01debd6b1d0f 1025 PRINTS PR00702 Acriflavin resistance protein family signature 353 374 2.1E-35 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS07035 0314e0fe6a901a3e26ea01debd6b1d0f 1025 PRINTS PR00702 Acriflavin resistance protein family signature 435 458 2.1E-35 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS07035 0314e0fe6a901a3e26ea01debd6b1d0f 1025 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 2.1E-35 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS07035 0314e0fe6a901a3e26ea01debd6b1d0f 1025 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 2.1E-35 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS07825 b6b866c4150e32361dcae7e8d31ecddf 360 Gene3D G3DSA:3.40.250.10 29 140 7.2E-35 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS07825 b6b866c4150e32361dcae7e8d31ecddf 360 PANTHER PTHR30401 29 271 6.1E-66 T 22-04-2016 SCD_RS07825 b6b866c4150e32361dcae7e8d31ecddf 360 SUPERFAMILY SSF52821 29 75 2.49E-23 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS07825 b6b866c4150e32361dcae7e8d31ecddf 360 SUPERFAMILY SSF52821 102 145 2.49E-23 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS07825 b6b866c4150e32361dcae7e8d31ecddf 360 SMART SM00450 15 142 4.1E-12 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS07825 b6b866c4150e32361dcae7e8d31ecddf 360 Gene3D G3DSA:3.40.50.300 155 268 1.2E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07825 b6b866c4150e32361dcae7e8d31ecddf 360 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 26 333 2.6E-111 T 22-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 SCD_RS07825 b6b866c4150e32361dcae7e8d31ecddf 360 PANTHER PTHR30401:SF0 29 271 6.1E-66 T 22-04-2016 SCD_RS07825 b6b866c4150e32361dcae7e8d31ecddf 360 Pfam PF00581 Rhodanese-like domain 26 137 3.7E-11 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS07825 b6b866c4150e32361dcae7e8d31ecddf 360 ProSitePatterns PS00380 Rhodanese signature 1. 38 49 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 SCD_RS10540 557ec2b0f93ba9cdb6c40ec66abc06ae 146 Gene3D G3DSA:3.10.50.40 131 144 2.5E-17 T 22-04-2016 SCD_RS10540 557ec2b0f93ba9cdb6c40ec66abc06ae 146 Gene3D G3DSA:3.10.50.40 4 84 2.5E-17 T 22-04-2016 SCD_RS10540 557ec2b0f93ba9cdb6c40ec66abc06ae 146 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 77 5.7E-13 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SCD_RS10540 557ec2b0f93ba9cdb6c40ec66abc06ae 146 SUPERFAMILY SSF54534 6 144 1.61E-31 T 22-04-2016 SCD_RS12355 b6913710d041e9a476da703be288e033 289 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 90 101 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SCD_RS12355 b6913710d041e9a476da703be288e033 289 Gene3D G3DSA:3.40.1010.10 12 120 2.9E-19 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 SCD_RS12355 b6913710d041e9a476da703be288e033 289 PANTHER PTHR21091:SF18 6 250 2.9E-80 T 22-04-2016 SCD_RS12355 b6913710d041e9a476da703be288e033 289 PIRSF PIRSF005917 2 287 1.4E-104 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SCD_RS12355 b6913710d041e9a476da703be288e033 289 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 212 1.5E-33 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SCD_RS12355 b6913710d041e9a476da703be288e033 289 PANTHER PTHR21091 6 250 2.9E-80 T 22-04-2016 SCD_RS12355 b6913710d041e9a476da703be288e033 289 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 12 283 3.2E-89 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SCD_RS12355 b6913710d041e9a476da703be288e033 289 SUPERFAMILY SSF53790 12 231 7.98E-81 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SCD_RS12355 b6913710d041e9a476da703be288e033 289 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 12 233 38.405 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SCD_RS12355 b6913710d041e9a476da703be288e033 289 Gene3D G3DSA:3.30.950.10 121 235 8.5E-40 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 SCD_RS14275 39698e7f1752d9357892d887499fa907 250 PANTHER PTHR10108:SF779 45 230 2.3E-14 T 22-04-2016 SCD_RS14275 39698e7f1752d9357892d887499fa907 250 Pfam PF13649 Methyltransferase domain 45 133 1.0E-12 T 22-04-2016 SCD_RS14275 39698e7f1752d9357892d887499fa907 250 Gene3D G3DSA:3.40.50.150 30 249 4.1E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS14275 39698e7f1752d9357892d887499fa907 250 PANTHER PTHR10108 45 230 2.3E-14 T 22-04-2016 SCD_RS14275 39698e7f1752d9357892d887499fa907 250 SUPERFAMILY SSF53335 20 213 1.05E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS04810 948d384ff86d53af22c93fe2c81f2ac3 431 Gene3D G3DSA:3.50.50.60 161 322 1.2E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS04810 948d384ff86d53af22c93fe2c81f2ac3 431 SUPERFAMILY SSF51905 162 426 9.26E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS04810 948d384ff86d53af22c93fe2c81f2ac3 431 Gene3D G3DSA:3.50.50.60 323 410 1.2E-13 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS04810 948d384ff86d53af22c93fe2c81f2ac3 431 Gene3D G3DSA:3.50.50.60 118 160 2.6E-4 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS04810 948d384ff86d53af22c93fe2c81f2ac3 431 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 168 190 1.1E-18 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SCD_RS04810 948d384ff86d53af22c93fe2c81f2ac3 431 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 315 339 1.1E-18 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SCD_RS04810 948d384ff86d53af22c93fe2c81f2ac3 431 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 280 288 1.1E-18 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SCD_RS04810 948d384ff86d53af22c93fe2c81f2ac3 431 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 372 388 1.1E-18 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SCD_RS04810 948d384ff86d53af22c93fe2c81f2ac3 431 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 170 426 3.7E-43 T 22-04-2016 SCD_RS04810 948d384ff86d53af22c93fe2c81f2ac3 431 Pfam PF13237 4Fe-4S dicluster domain 51 100 1.7E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS04810 948d384ff86d53af22c93fe2c81f2ac3 431 SUPERFAMILY SSF54862 44 112 3.81E-18 T 22-04-2016 SCD_RS04810 948d384ff86d53af22c93fe2c81f2ac3 431 PANTHER PTHR22912 153 428 1.3E-21 T 22-04-2016 SCD_RS04810 948d384ff86d53af22c93fe2c81f2ac3 431 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 188 6.35E-11 T 22-04-2016 SCD_RS04810 948d384ff86d53af22c93fe2c81f2ac3 431 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 319 337 6.35E-11 T 22-04-2016 SCD_RS04810 948d384ff86d53af22c93fe2c81f2ac3 431 Gene3D G3DSA:3.30.70.20 53 107 2.1E-14 T 22-04-2016 SCD_RS05760 09cad0dbb74eeebea5329059765fa0c0 468 SUPERFAMILY SSF161098 248 447 1.44E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SCD_RS05760 09cad0dbb74eeebea5329059765fa0c0 468 Gene3D G3DSA:1.10.3720.10 240 465 1.7E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SCD_RS05760 09cad0dbb74eeebea5329059765fa0c0 468 PANTHER PTHR30465 229 468 1.6E-94 T 22-04-2016 SCD_RS05760 09cad0dbb74eeebea5329059765fa0c0 468 PANTHER PTHR30465 25 128 1.6E-94 T 22-04-2016 SCD_RS05760 09cad0dbb74eeebea5329059765fa0c0 468 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 265 468 8.9E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SCD_RS05760 09cad0dbb74eeebea5329059765fa0c0 468 PANTHER PTHR30465:SF2 229 468 1.6E-94 T 22-04-2016 SCD_RS05760 09cad0dbb74eeebea5329059765fa0c0 468 PANTHER PTHR30465:SF2 25 128 1.6E-94 T 22-04-2016 SCD_RS15675 0c001261b9212c6ad81de681d1009c5c 201 Pfam PF16859 Bacterial transcriptional repressor C-terminal 77 162 2.2E-9 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SCD_RS15675 0c001261b9212c6ad81de681d1009c5c 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 5.9E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SCD_RS15675 0c001261b9212c6ad81de681d1009c5c 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 5.9E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SCD_RS15675 0c001261b9212c6ad81de681d1009c5c 201 Gene3D G3DSA:1.10.357.10 11 198 4.0E-52 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SCD_RS15675 0c001261b9212c6ad81de681d1009c5c 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 4.5E-16 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SCD_RS15675 0c001261b9212c6ad81de681d1009c5c 201 SUPERFAMILY SSF48498 77 199 1.08E-13 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SCD_RS15675 0c001261b9212c6ad81de681d1009c5c 201 PANTHER PTHR30055:SF76 1 199 1.7E-27 T 22-04-2016 SCD_RS15675 0c001261b9212c6ad81de681d1009c5c 201 SUPERFAMILY SSF46689 10 72 1.35E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS15675 0c001261b9212c6ad81de681d1009c5c 201 PANTHER PTHR30055 1 199 1.7E-27 T 22-04-2016 SCD_RS01645 79de2b861c15f6fc4c6e85f6b2f818c5 191 SUPERFAMILY SSF101874 23 188 2.49E-43 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SCD_RS01645 79de2b861c15f6fc4c6e85f6b2f818c5 191 SMART SM00867 23 186 3.0E-45 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SCD_RS01645 79de2b861c15f6fc4c6e85f6b2f818c5 191 PANTHER PTHR34406 1 187 1.5E-30 T 22-04-2016 SCD_RS01645 79de2b861c15f6fc4c6e85f6b2f818c5 191 Gene3D G3DSA:2.40.128.110 20 187 5.2E-40 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SCD_RS01645 79de2b861c15f6fc4c6e85f6b2f818c5 191 Pfam PF04264 YceI-like domain 24 185 1.2E-28 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SCD_RS01645 79de2b861c15f6fc4c6e85f6b2f818c5 191 PANTHER PTHR34406:SF1 1 187 1.5E-30 T 22-04-2016 SCD_RS07500 cf6f1f6938bb21a8fe66b59587b25e1d 261 PANTHER PTHR24220 10 249 1.9E-115 T 22-04-2016 SCD_RS07500 cf6f1f6938bb21a8fe66b59587b25e1d 261 SMART SM00382 33 223 2.5E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS07500 cf6f1f6938bb21a8fe66b59587b25e1d 261 PANTHER PTHR24220:SF483 10 249 1.9E-115 T 22-04-2016 SCD_RS07500 cf6f1f6938bb21a8fe66b59587b25e1d 261 SUPERFAMILY SSF52540 7 243 9.89E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07500 cf6f1f6938bb21a8fe66b59587b25e1d 261 Gene3D G3DSA:3.40.50.300 5 239 1.7E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07500 cf6f1f6938bb21a8fe66b59587b25e1d 261 Pfam PF00005 ABC transporter 25 174 1.4E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS07500 cf6f1f6938bb21a8fe66b59587b25e1d 261 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS11760 e0d8860c24654bb2c5c0c148d4312f51 193 Pfam PF13091 PLD-like domain 56 179 1.9E-24 T 22-04-2016 IPR025202 Phospholipase D-like domain SCD_RS11760 e0d8860c24654bb2c5c0c148d4312f51 193 Gene3D G3DSA:3.30.870.10 39 190 5.9E-33 T 22-04-2016 SCD_RS11760 e0d8860c24654bb2c5c0c148d4312f51 193 PANTHER PTHR21248 46 183 3.3E-33 T 22-04-2016 SCD_RS11760 e0d8860c24654bb2c5c0c148d4312f51 193 SUPERFAMILY SSF56024 42 190 1.3E-30 T 22-04-2016 SCD_RS12540 bf430b133c6afbc60c877de96a1198f0 127 Hamap MF_00791 Protein ApaG [apaG]. 2 127 33.578 T 22-04-2016 IPR023065 Uncharacterised protein family ApaG SCD_RS12540 bf430b133c6afbc60c877de96a1198f0 127 PANTHER PTHR14289 9 124 3.7E-47 T 22-04-2016 SCD_RS12540 bf430b133c6afbc60c877de96a1198f0 127 Gene3D G3DSA:2.60.40.1470 6 127 5.9E-48 T 22-04-2016 IPR007474 ApaG domain SCD_RS12540 bf430b133c6afbc60c877de96a1198f0 127 Pfam PF04379 Protein of unknown function (DUF525) 20 104 2.1E-37 T 22-04-2016 IPR007474 ApaG domain SCD_RS12540 bf430b133c6afbc60c877de96a1198f0 127 SUPERFAMILY SSF110069 7 127 3.92E-49 T 22-04-2016 IPR007474 ApaG domain SCD_RS03085 c3db3090249ec543621fd609b4bb4a98 156 SUPERFAMILY SSF47973 2 149 5.49E-62 T 22-04-2016 IPR023798 Ribosomal protein S7 domain SCD_RS03085 c3db3090249ec543621fd609b4bb4a98 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 SCD_RS03085 c3db3090249ec543621fd609b4bb4a98 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 3.1E-65 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SCD_RS03085 c3db3090249ec543621fd609b4bb4a98 156 Gene3D G3DSA:1.10.455.10 7 156 2.0E-65 T 22-04-2016 IPR023798 Ribosomal protein S7 domain SCD_RS03085 c3db3090249ec543621fd609b4bb4a98 156 PIRSF PIRSF002122 3 156 5.4E-59 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 SCD_RS03085 c3db3090249ec543621fd609b4bb4a98 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.523 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SCD_RS03085 c3db3090249ec543621fd609b4bb4a98 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 3.7E-66 T 22-04-2016 IPR023798 Ribosomal protein S7 domain SCD_RS05940 f9c2d0c9145d90e005a216ccf69a6b8b 445 Pfam PF03600 Citrate transporter 28 387 1.3E-49 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 SCD_RS05940 f9c2d0c9145d90e005a216ccf69a6b8b 445 PRINTS PR00758 Arsenical pump membrane protein signature 295 319 1.9E-6 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SCD_RS05940 f9c2d0c9145d90e005a216ccf69a6b8b 445 PRINTS PR00758 Arsenical pump membrane protein signature 340 362 1.9E-6 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SCD_RS05940 f9c2d0c9145d90e005a216ccf69a6b8b 445 PRINTS PR00758 Arsenical pump membrane protein signature 113 137 1.9E-6 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SCD_RS05940 f9c2d0c9145d90e005a216ccf69a6b8b 445 PANTHER PTHR10283:SF67 17 444 1.7E-130 T 22-04-2016 SCD_RS05940 f9c2d0c9145d90e005a216ccf69a6b8b 445 PANTHER PTHR10283 17 444 1.7E-130 T 22-04-2016 SCD_RS08840 3b100c4a39183f90443e22ef03951a23 452 Gene3D G3DSA:3.30.230.10 280 450 7.6E-37 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SCD_RS08840 3b100c4a39183f90443e22ef03951a23 452 Gene3D G3DSA:3.40.50.300 55 273 2.9E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08840 3b100c4a39183f90443e22ef03951a23 452 SUPERFAMILY SSF52540 67 287 3.78E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08840 3b100c4a39183f90443e22ef03951a23 452 SMART SM00382 87 240 6.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS08840 3b100c4a39183f90443e22ef03951a23 452 PANTHER PTHR32472 1 451 1.7E-211 T 22-04-2016 SCD_RS08840 3b100c4a39183f90443e22ef03951a23 452 Pfam PF13481 AAA domain 65 218 9.2E-17 T 22-04-2016 SCD_RS08840 3b100c4a39183f90443e22ef03951a23 452 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 447 2.6E-196 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 SCD_RS08840 3b100c4a39183f90443e22ef03951a23 452 PRINTS PR01874 DNA repair protein radA signature 209 237 6.1E-95 T 22-04-2016 SCD_RS08840 3b100c4a39183f90443e22ef03951a23 452 PRINTS PR01874 DNA repair protein radA signature 79 107 6.1E-95 T 22-04-2016 SCD_RS08840 3b100c4a39183f90443e22ef03951a23 452 PRINTS PR01874 DNA repair protein radA signature 10 34 6.1E-95 T 22-04-2016 SCD_RS08840 3b100c4a39183f90443e22ef03951a23 452 PRINTS PR01874 DNA repair protein radA signature 170 194 6.1E-95 T 22-04-2016 SCD_RS08840 3b100c4a39183f90443e22ef03951a23 452 PRINTS PR01874 DNA repair protein radA signature 318 341 6.1E-95 T 22-04-2016 SCD_RS08840 3b100c4a39183f90443e22ef03951a23 452 PRINTS PR01874 DNA repair protein radA signature 244 270 6.1E-95 T 22-04-2016 SCD_RS08840 3b100c4a39183f90443e22ef03951a23 452 PRINTS PR01874 DNA repair protein radA signature 120 137 6.1E-95 T 22-04-2016 SCD_RS08840 3b100c4a39183f90443e22ef03951a23 452 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 426 1.6E-7 T 22-04-2016 SCD_RS08840 3b100c4a39183f90443e22ef03951a23 452 SUPERFAMILY SSF54211 299 451 1.1E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SCD_RS08840 3b100c4a39183f90443e22ef03951a23 452 SUPERFAMILY SSF54211 251 265 1.1E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SCD_RS14165 06a282dd630f233274de6255f7c4fdf2 367 Gene3D G3DSA:3.40.50.2000 156 340 3.1E-26 T 22-04-2016 SCD_RS14165 06a282dd630f233274de6255f7c4fdf2 367 PANTHER PTHR12526 8 367 6.3E-57 T 22-04-2016 SCD_RS14165 06a282dd630f233274de6255f7c4fdf2 367 Pfam PF13439 Glycosyltransferase Family 4 17 171 1.4E-23 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SCD_RS14165 06a282dd630f233274de6255f7c4fdf2 367 Pfam PF00534 Glycosyl transferases group 1 177 340 1.6E-30 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SCD_RS14165 06a282dd630f233274de6255f7c4fdf2 367 SUPERFAMILY SSF53756 8 361 1.03E-72 T 22-04-2016 SCD_RS06615 90992c6ab7cba71b948ba7023facd04d 426 PANTHER PTHR11374:SF25 2 426 1.3E-231 T 22-04-2016 SCD_RS06615 90992c6ab7cba71b948ba7023facd04d 426 PANTHER PTHR11374 2 426 1.3E-231 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SCD_RS06615 90992c6ab7cba71b948ba7023facd04d 426 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 4 178 3.5E-30 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 SCD_RS06615 90992c6ab7cba71b948ba7023facd04d 426 PIRSF PIRSF000124 2 426 1.1E-58 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SCD_RS06615 90992c6ab7cba71b948ba7023facd04d 426 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 198 286 2.3E-22 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 SCD_RS06615 90992c6ab7cba71b948ba7023facd04d 426 SMART SM00984 313 413 3.0E-30 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SCD_RS06615 90992c6ab7cba71b948ba7023facd04d 426 SUPERFAMILY SSF48179 197 287 2.38E-24 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SCD_RS06615 90992c6ab7cba71b948ba7023facd04d 426 SUPERFAMILY SSF52413 296 412 1.01E-28 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SCD_RS06615 90992c6ab7cba71b948ba7023facd04d 426 SUPERFAMILY SSF51735 4 185 4.71E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS06615 90992c6ab7cba71b948ba7023facd04d 426 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 4 394 2.7E-116 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SCD_RS06615 90992c6ab7cba71b948ba7023facd04d 426 PIRSF PIRSF500136 1 426 4.9E-145 T 22-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 SCD_RS06615 90992c6ab7cba71b948ba7023facd04d 426 Gene3D G3DSA:3.40.50.720 4 218 1.4E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS06615 90992c6ab7cba71b948ba7023facd04d 426 Gene3D G3DSA:3.40.50.720 228 426 6.3E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS06615 90992c6ab7cba71b948ba7023facd04d 426 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 314 412 4.6E-20 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SCD_RS07865 5b2482b80f2b316c6a5ad694ec783d0f 296 Pfam PF03466 LysR substrate binding domain 87 295 4.6E-52 T 22-04-2016 IPR005119 LysR, substrate-binding SCD_RS07865 5b2482b80f2b316c6a5ad694ec783d0f 296 PANTHER PTHR30126:SF11 1 290 3.3E-95 T 22-04-2016 SCD_RS07865 5b2482b80f2b316c6a5ad694ec783d0f 296 SUPERFAMILY SSF53850 86 295 4.25E-47 T 22-04-2016 SCD_RS07865 5b2482b80f2b316c6a5ad694ec783d0f 296 Gene3D G3DSA:3.40.190.10 91 175 2.9E-18 T 22-04-2016 SCD_RS07865 5b2482b80f2b316c6a5ad694ec783d0f 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.2E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SCD_RS07865 5b2482b80f2b316c6a5ad694ec783d0f 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.2E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SCD_RS07865 5b2482b80f2b316c6a5ad694ec783d0f 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.2E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SCD_RS07865 5b2482b80f2b316c6a5ad694ec783d0f 296 PANTHER PTHR30126 1 290 3.3E-95 T 22-04-2016 SCD_RS07865 5b2482b80f2b316c6a5ad694ec783d0f 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.1E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SCD_RS07865 5b2482b80f2b316c6a5ad694ec783d0f 296 SUPERFAMILY SSF46785 4 111 2.81E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS07865 5b2482b80f2b316c6a5ad694ec783d0f 296 Gene3D G3DSA:1.10.10.10 4 87 1.6E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS07865 5b2482b80f2b316c6a5ad694ec783d0f 296 Gene3D G3DSA:3.40.190.10 176 265 1.3E-25 T 22-04-2016 SCD_RS05260 ae6250402dbb5b4c838b44a551c67420 408 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SCD_RS05260 ae6250402dbb5b4c838b44a551c67420 408 Pfam PF00696 Amino acid kinase family 3 229 2.6E-53 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SCD_RS05260 ae6250402dbb5b4c838b44a551c67420 408 SUPERFAMILY SSF55021 249 326 4.37E-18 T 22-04-2016 SCD_RS05260 ae6250402dbb5b4c838b44a551c67420 408 PANTHER PTHR21499 1 406 4.9E-176 T 22-04-2016 SCD_RS05260 ae6250402dbb5b4c838b44a551c67420 408 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 64 403 1.6E-121 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SCD_RS05260 ae6250402dbb5b4c838b44a551c67420 408 PIRSF PIRSF000726 59 408 3.6E-150 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SCD_RS05260 ae6250402dbb5b4c838b44a551c67420 408 SUPERFAMILY SSF53633 4 242 6.94E-77 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SCD_RS05260 ae6250402dbb5b4c838b44a551c67420 408 Pfam PF01842 ACT domain 268 324 8.5E-8 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SCD_RS05260 ae6250402dbb5b4c838b44a551c67420 408 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 403 1.2E-134 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SCD_RS05260 ae6250402dbb5b4c838b44a551c67420 408 PANTHER PTHR21499:SF27 1 406 4.9E-176 T 22-04-2016 SCD_RS05260 ae6250402dbb5b4c838b44a551c67420 408 SUPERFAMILY SSF55021 330 405 3.78E-25 T 22-04-2016 SCD_RS05260 ae6250402dbb5b4c838b44a551c67420 408 Gene3D G3DSA:3.40.1160.10 1 246 1.6E-75 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SCD_RS05260 ae6250402dbb5b4c838b44a551c67420 408 Pfam PF13840 ACT domain 338 400 3.5E-16 T 22-04-2016 IPR027795 GATS-like ACT domain SCD_RS11985 7335f785b3bfa32dd3cb22a7383d06b4 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 128 6.6E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SCD_RS11985 7335f785b3bfa32dd3cb22a7383d06b4 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 108 6.6E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SCD_RS11985 7335f785b3bfa32dd3cb22a7383d06b4 171 Pfam PF01047 MarR family 60 117 5.6E-15 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SCD_RS11985 7335f785b3bfa32dd3cb22a7383d06b4 171 SUPERFAMILY SSF46785 29 167 3.5E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS11985 7335f785b3bfa32dd3cb22a7383d06b4 171 PANTHER PTHR33164 5 168 9.3E-22 T 22-04-2016 SCD_RS11985 7335f785b3bfa32dd3cb22a7383d06b4 171 Gene3D G3DSA:1.10.10.10 28 168 1.7E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS11985 7335f785b3bfa32dd3cb22a7383d06b4 171 SMART SM00347 52 152 1.4E-17 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SCD_RS14300 9a18d51bf74cd3994eb402f84204063a 480 SUPERFAMILY SSF53335 45 199 2.99E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS14300 9a18d51bf74cd3994eb402f84204063a 480 Pfam PF13847 Methyltransferase domain 50 158 8.3E-17 T 22-04-2016 IPR025714 Methyltransferase domain SCD_RS14300 9a18d51bf74cd3994eb402f84204063a 480 SUPERFAMILY SSF53448 246 477 5.63E-47 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS14300 9a18d51bf74cd3994eb402f84204063a 480 Pfam PF00535 Glycosyl transferase family 2 246 372 3.9E-20 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SCD_RS14300 9a18d51bf74cd3994eb402f84204063a 480 Gene3D G3DSA:3.40.50.150 24 194 1.1E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS14300 9a18d51bf74cd3994eb402f84204063a 480 PANTHER PTHR10859 227 474 3.5E-49 T 22-04-2016 SCD_RS14300 9a18d51bf74cd3994eb402f84204063a 480 Gene3D G3DSA:3.90.550.10 245 462 9.2E-22 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS11715 1e24e1da0709ef401be3268d023aad38 555 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 403 526 3.6E-30 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SCD_RS11715 1e24e1da0709ef401be3268d023aad38 555 SUPERFAMILY SSF52467 161 345 2.05E-36 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SCD_RS11715 1e24e1da0709ef401be3268d023aad38 555 SUPERFAMILY SSF52518 1 183 3.48E-52 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS11715 1e24e1da0709ef401be3268d023aad38 555 PANTHER PTHR18968 1 549 7.2E-129 T 22-04-2016 SCD_RS11715 1e24e1da0709ef401be3268d023aad38 555 Gene3D G3DSA:3.40.50.970 1 182 1.0E-62 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS11715 1e24e1da0709ef401be3268d023aad38 555 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 199 336 3.6E-33 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SCD_RS11715 1e24e1da0709ef401be3268d023aad38 555 SUPERFAMILY SSF52518 380 549 5.05E-37 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS11715 1e24e1da0709ef401be3268d023aad38 555 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 177 4.5E-54 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SCD_RS11715 1e24e1da0709ef401be3268d023aad38 555 Gene3D G3DSA:3.40.50.1220 196 359 4.6E-39 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SCD_RS11715 1e24e1da0709ef401be3268d023aad38 555 Gene3D G3DSA:3.40.50.970 378 549 2.6E-38 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS06690 7cad00d3e38f8b2da035e4a67732968b 544 PANTHER PTHR22926 4 354 6.1E-77 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SCD_RS06690 7cad00d3e38f8b2da035e4a67732968b 544 PANTHER PTHR22926:SF3 4 354 6.1E-77 T 22-04-2016 SCD_RS06690 7cad00d3e38f8b2da035e4a67732968b 544 ProSitePatterns PS01348 MraY family signature 2. 144 155 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SCD_RS06690 7cad00d3e38f8b2da035e4a67732968b 544 PRINTS PR00173 Glutamate-aspartate symporter signature 229 249 4.0E-5 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SCD_RS06690 7cad00d3e38f8b2da035e4a67732968b 544 PRINTS PR00173 Glutamate-aspartate symporter signature 298 323 4.0E-5 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SCD_RS06690 7cad00d3e38f8b2da035e4a67732968b 544 PRINTS PR00173 Glutamate-aspartate symporter signature 522 541 4.0E-5 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SCD_RS06690 7cad00d3e38f8b2da035e4a67732968b 544 Pfam PF00953 Glycosyl transferase family 4 73 224 9.8E-36 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SCD_RS14040 b12d32c449292b3852eb4abd9c83941b 90 PANTHER PTHR36965 2 89 5.2E-44 T 22-04-2016 SCD_RS14040 b12d32c449292b3852eb4abd9c83941b 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 75 1.0E-32 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 SCD_RS14040 b12d32c449292b3852eb4abd9c83941b 90 PANTHER PTHR36965:SF1 2 89 5.2E-44 T 22-04-2016 SCD_RS14040 b12d32c449292b3852eb4abd9c83941b 90 SUPERFAMILY SSF111148 1 89 2.49E-39 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 SCD_RS14040 b12d32c449292b3852eb4abd9c83941b 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.638 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 SCD_RS14040 b12d32c449292b3852eb4abd9c83941b 90 Gene3D G3DSA:1.10.3880.10 1 89 1.3E-41 T 22-04-2016 SCD_RS14040 b12d32c449292b3852eb4abd9c83941b 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.9E-43 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 SCD_RS14040 b12d32c449292b3852eb4abd9c83941b 90 PIRSF PIRSF029827 1 90 4.0E-41 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 SCD_RS11660 6a74f589d534ad3e2816297a4fa49d3a 213 PANTHER PTHR10520 1 190 3.7E-100 T 22-04-2016 SCD_RS11660 6a74f589d534ad3e2816297a4fa49d3a 213 Gene3D G3DSA:3.40.50.170 2 191 3.5E-70 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS11660 6a74f589d534ad3e2816297a4fa49d3a 213 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 184 32.327 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 SCD_RS11660 6a74f589d534ad3e2816297a4fa49d3a 213 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 188 5.1E-74 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 SCD_RS11660 6a74f589d534ad3e2816297a4fa49d3a 213 Pfam PF00551 Formyl transferase 3 178 5.2E-59 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS11660 6a74f589d534ad3e2816297a4fa49d3a 213 SUPERFAMILY SSF53328 4 192 7.72E-66 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 Gene3D G3DSA:1.25.40.10 693 902 4.3E-32 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 Gene3D G3DSA:1.25.40.10 151 349 1.9E-42 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 Gene3D G3DSA:1.25.40.10 449 692 3.7E-39 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 Gene3D G3DSA:1.25.40.10 32 81 1.9E-42 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 SUPERFAMILY SSF48452 768 904 2.34E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 PANTHER PTHR23083 35 115 1.4E-66 T 22-04-2016 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 PANTHER PTHR23083 584 739 1.4E-66 T 22-04-2016 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 PANTHER PTHR23083 773 823 1.4E-66 T 22-04-2016 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 PANTHER PTHR23083 149 270 1.4E-66 T 22-04-2016 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 PANTHER PTHR23083 305 348 1.4E-66 T 22-04-2016 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 SUPERFAMILY SSF48452 268 440 6.05E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 Pfam PF13432 Tetratricopeptide repeat 210 253 1.7E-4 T 22-04-2016 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 Pfam PF13432 Tetratricopeptide repeat 783 826 0.019 T 22-04-2016 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 Pfam PF13432 Tetratricopeptide repeat 482 539 0.0037 T 22-04-2016 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 Pfam PF13432 Tetratricopeptide repeat 580 642 1.5E-5 T 22-04-2016 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 Pfam PF14559 Tetratricopeptide repeat 854 910 4.2E-8 T 22-04-2016 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 Pfam PF14559 Tetratricopeptide repeat 43 101 2.8E-8 T 22-04-2016 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 Gene3D G3DSA:1.25.40.10 350 443 3.7E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 SUPERFAMILY SSF48452 20 306 1.8E-25 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 TIGRFAM TIGR02917 PEP_TPR_lipo: putative PEP-CTERM system TPR-repeat lipoprotein 10 905 1.5E-266 T 22-04-2016 IPR014266 PEP-CTERM system TPR-repeat lipoprotein, putative SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 SMART SM00028 373 406 9.4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 SMART SM00028 574 607 200.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 SMART SM00028 66 99 61.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 SMART SM00028 509 542 110.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 SMART SM00028 135 168 170.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 SMART SM00028 608 641 2.6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 SMART SM00028 475 508 0.009 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 SMART SM00028 777 810 53.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 SMART SM00028 676 709 140.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 SMART SM00028 305 338 7.3 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 SMART SM00028 169 202 19.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 SMART SM00028 203 236 4.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 SMART SM00028 710 743 9.5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 SMART SM00028 642 675 0.025 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 SMART SM00028 271 304 200.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 SMART SM00028 844 877 1.1 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 SMART SM00028 237 270 48.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 SMART SM00028 32 65 28.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 SUPERFAMILY SSF48452 437 682 8.44E-30 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 264 330 9.7E-7 T 22-04-2016 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 Pfam PF13181 Tetratricopeptide repeat 170 202 0.0095 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 Pfam PF13181 Tetratricopeptide repeat 717 741 0.0051 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 Pfam PF13181 Tetratricopeptide repeat 644 674 0.0018 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14825 36d77721119f3fc15baecc57cad98b13 924 SUPERFAMILY SSF48452 655 742 9.96E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS00045 ea605dfec55224cd7b12be364f9521db 344 Pfam PF01476 LysM domain 33 79 9.4E-11 T 22-04-2016 IPR018392 LysM domain SCD_RS00045 ea605dfec55224cd7b12be364f9521db 344 PANTHER PTHR34700:SF2 16 341 4.9E-45 T 22-04-2016 SCD_RS00045 ea605dfec55224cd7b12be364f9521db 344 SUPERFAMILY SSF54106 32 80 2.62E-7 T 22-04-2016 IPR018392 LysM domain SCD_RS00045 ea605dfec55224cd7b12be364f9521db 344 Gene3D G3DSA:3.10.350.10 32 80 1.4E-6 T 22-04-2016 IPR018392 LysM domain SCD_RS00045 ea605dfec55224cd7b12be364f9521db 344 PANTHER PTHR34700 16 341 4.9E-45 T 22-04-2016 SCD_RS00045 ea605dfec55224cd7b12be364f9521db 344 SMART SM00257 32 81 2.3E-4 T 22-04-2016 IPR018392 LysM domain SCD_RS08280 936ae1b19b1ca7a1e552a1c57d9557f1 185 Pfam PF16823 Atypical PilZ domain, cyclic di-GMP receptor 45 183 2.5E-19 T 22-04-2016 IPR031800 Cyclic di-GMP receptor, atypical PilZ domain SCD_RS10160 5c7a3bda99f0f1cb4f2e5234cbed67a5 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 5.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS10160 5c7a3bda99f0f1cb4f2e5234cbed67a5 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 5.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS10160 5c7a3bda99f0f1cb4f2e5234cbed67a5 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 460 5.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS10160 5c7a3bda99f0f1cb4f2e5234cbed67a5 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 5.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS10160 5c7a3bda99f0f1cb4f2e5234cbed67a5 462 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 307 4.9E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS10160 5c7a3bda99f0f1cb4f2e5234cbed67a5 462 Gene3D G3DSA:1.10.287.130 234 304 1.9E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS10160 5c7a3bda99f0f1cb4f2e5234cbed67a5 462 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 460 5.3E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS10160 5c7a3bda99f0f1cb4f2e5234cbed67a5 462 PANTHER PTHR24423:SF474 184 462 5.3E-63 T 22-04-2016 SCD_RS10160 5c7a3bda99f0f1cb4f2e5234cbed67a5 462 PANTHER PTHR24423:SF474 1 10 5.3E-63 T 22-04-2016 SCD_RS10160 5c7a3bda99f0f1cb4f2e5234cbed67a5 462 PANTHER PTHR24423:SF474 71 146 5.3E-63 T 22-04-2016 SCD_RS10160 5c7a3bda99f0f1cb4f2e5234cbed67a5 462 PANTHER PTHR24423 184 462 5.3E-63 T 22-04-2016 SCD_RS10160 5c7a3bda99f0f1cb4f2e5234cbed67a5 462 PANTHER PTHR24423 1 10 5.3E-63 T 22-04-2016 SCD_RS10160 5c7a3bda99f0f1cb4f2e5234cbed67a5 462 PANTHER PTHR24423 71 146 5.3E-63 T 22-04-2016 SCD_RS10160 5c7a3bda99f0f1cb4f2e5234cbed67a5 462 SUPERFAMILY SSF47384 227 307 5.1E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS10160 5c7a3bda99f0f1cb4f2e5234cbed67a5 462 Gene3D G3DSA:3.30.565.10 317 461 4.4E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS10160 5c7a3bda99f0f1cb4f2e5234cbed67a5 462 SMART SM00388 243 308 1.8E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS10160 5c7a3bda99f0f1cb4f2e5234cbed67a5 462 Pfam PF08521 Two-component sensor kinase N-terminal 21 166 7.2E-28 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal SCD_RS10160 5c7a3bda99f0f1cb4f2e5234cbed67a5 462 SUPERFAMILY SSF55874 297 460 8.51E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS10160 5c7a3bda99f0f1cb4f2e5234cbed67a5 462 SMART SM00387 355 462 6.2E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS08235 78e37b40f016433baad9e2f9407590c1 182 Gene3D G3DSA:3.40.50.2020 14 181 5.1E-51 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SCD_RS08235 78e37b40f016433baad9e2f9407590c1 182 Pfam PF00156 Phosphoribosyl transferase domain 17 165 6.5E-18 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SCD_RS08235 78e37b40f016433baad9e2f9407590c1 182 PANTHER PTHR22573:SF56 19 182 4.6E-45 T 22-04-2016 SCD_RS08235 78e37b40f016433baad9e2f9407590c1 182 SUPERFAMILY SSF53271 17 181 9.05E-42 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SCD_RS08235 78e37b40f016433baad9e2f9407590c1 182 PANTHER PTHR22573 19 182 4.6E-45 T 22-04-2016 SCD_RS07095 0f7e2ca6eb6af3f744eeea2338a0c82a 301 Pfam PF01925 Sulfite exporter TauE/SafE 22 294 2.3E-41 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SCD_RS07095 0f7e2ca6eb6af3f744eeea2338a0c82a 301 PANTHER PTHR30269:SF17 12 300 1.1E-99 T 22-04-2016 SCD_RS07095 0f7e2ca6eb6af3f744eeea2338a0c82a 301 PANTHER PTHR30269 12 300 1.1E-99 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SCD_RS11700 0d208e6f2ff45f70ee55d74041b92daa 301 PANTHER PTHR38103:SF1 2 301 5.7E-91 T 22-04-2016 SCD_RS11700 0d208e6f2ff45f70ee55d74041b92daa 301 Pfam PF04381 Putative exonuclease, RdgC 1 296 2.7E-122 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 SCD_RS11700 0d208e6f2ff45f70ee55d74041b92daa 301 PANTHER PTHR38103 2 301 5.7E-91 T 22-04-2016 SCD_RS11700 0d208e6f2ff45f70ee55d74041b92daa 301 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 298 38.391 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 SCD_RS00070 231c94ab592512034e8ab01af8033969 708 Gene3D G3DSA:3.30.450.20 358 478 2.8E-10 T 22-04-2016 SCD_RS00070 231c94ab592512034e8ab01af8033969 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 690 703 5.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS00070 231c94ab592512034e8ab01af8033969 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 665 5.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS00070 231c94ab592512034e8ab01af8033969 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 651 5.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS00070 231c94ab592512034e8ab01af8033969 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 666 684 5.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS00070 231c94ab592512034e8ab01af8033969 708 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 598 705 4.0E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS00070 231c94ab592512034e8ab01af8033969 708 SUPERFAMILY SSF55785 358 463 9.63E-8 T 22-04-2016 IPR000014 PAS domain SCD_RS00070 231c94ab592512034e8ab01af8033969 708 SUPERFAMILY SSF47384 483 557 4.71E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS00070 231c94ab592512034e8ab01af8033969 708 PANTHER PTHR24423:SF520 54 64 2.2E-62 T 22-04-2016 SCD_RS00070 231c94ab592512034e8ab01af8033969 708 PANTHER PTHR24423:SF520 364 703 2.2E-62 T 22-04-2016 SCD_RS00070 231c94ab592512034e8ab01af8033969 708 SMART SM00387 598 706 1.4E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS00070 231c94ab592512034e8ab01af8033969 708 PIRSF PIRSF037532 1 708 2.5E-234 T 22-04-2016 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator SCD_RS00070 231c94ab592512034e8ab01af8033969 708 Gene3D G3DSA:1.10.287.130 483 556 1.9E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS00070 231c94ab592512034e8ab01af8033969 708 Pfam PF13188 PAS domain 366 403 2.1E-4 T 22-04-2016 IPR000014 PAS domain SCD_RS00070 231c94ab592512034e8ab01af8033969 708 Pfam PF00512 His Kinase A (phospho-acceptor) domain 489 556 3.5E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS00070 231c94ab592512034e8ab01af8033969 708 SMART SM00388 488 560 8.3E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS00070 231c94ab592512034e8ab01af8033969 708 SUPERFAMILY SSF158472 302 349 2.09E-8 T 22-04-2016 SCD_RS00070 231c94ab592512034e8ab01af8033969 708 SUPERFAMILY SSF55874 556 704 2.88E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS00070 231c94ab592512034e8ab01af8033969 708 Gene3D G3DSA:3.30.565.10 560 705 2.5E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS00070 231c94ab592512034e8ab01af8033969 708 Pfam PF00672 HAMP domain 282 348 8.5E-16 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS00070 231c94ab592512034e8ab01af8033969 708 PANTHER PTHR24423 54 64 2.2E-62 T 22-04-2016 SCD_RS00070 231c94ab592512034e8ab01af8033969 708 PANTHER PTHR24423 364 703 2.2E-62 T 22-04-2016 SCD_RS00070 231c94ab592512034e8ab01af8033969 708 SMART SM00304 300 352 2.4E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS11390 616724f3ffec206df1cbca1e11a2833b 422 Gene3D G3DSA:3.40.640.10 56 283 8.0E-71 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS11390 616724f3ffec206df1cbca1e11a2833b 422 PANTHER PTHR13693:SF53 133 416 1.6E-128 T 22-04-2016 SCD_RS11390 616724f3ffec206df1cbca1e11a2833b 422 Gene3D G3DSA:3.90.1150.10 284 392 1.1E-24 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS11390 616724f3ffec206df1cbca1e11a2833b 422 SUPERFAMILY SSF53383 32 397 2.53E-91 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS11390 616724f3ffec206df1cbca1e11a2833b 422 PANTHER PTHR13693 2 117 1.6E-128 T 22-04-2016 SCD_RS11390 616724f3ffec206df1cbca1e11a2833b 422 PANTHER PTHR13693:SF53 2 117 1.6E-128 T 22-04-2016 SCD_RS11390 616724f3ffec206df1cbca1e11a2833b 422 PANTHER PTHR13693 133 416 1.6E-128 T 22-04-2016 SCD_RS11390 616724f3ffec206df1cbca1e11a2833b 422 Pfam PF00155 Aminotransferase class I and II 38 390 3.6E-47 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SCD_RS11390 616724f3ffec206df1cbca1e11a2833b 422 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 247 256 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 SCD_RS03545 1ba0f2a884473d001abd0efaa45e4d11 470 PANTHER PTHR23429:SF0 14 464 5.8E-179 T 22-04-2016 SCD_RS03545 1ba0f2a884473d001abd0efaa45e4d11 470 SUPERFAMILY SSF55347 173 461 9.81E-95 T 22-04-2016 SCD_RS03545 1ba0f2a884473d001abd0efaa45e4d11 470 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 186 460 1.8E-91 T 22-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SCD_RS03545 1ba0f2a884473d001abd0efaa45e4d11 470 Gene3D G3DSA:3.40.50.720 13 182 7.9E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS03545 1ba0f2a884473d001abd0efaa45e4d11 470 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 11 462 71.455 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SCD_RS03545 1ba0f2a884473d001abd0efaa45e4d11 470 PANTHER PTHR23429 14 464 5.8E-179 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SCD_RS03545 1ba0f2a884473d001abd0efaa45e4d11 470 Gene3D G3DSA:3.30.360.10 183 460 3.5E-98 T 22-04-2016 SCD_RS03545 1ba0f2a884473d001abd0efaa45e4d11 470 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 173 179 - T 22-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SCD_RS03545 1ba0f2a884473d001abd0efaa45e4d11 470 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 15 183 3.8E-47 T 22-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SCD_RS03545 1ba0f2a884473d001abd0efaa45e4d11 470 PIRSF PIRSF000110 2 464 7.1E-150 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SCD_RS03545 1ba0f2a884473d001abd0efaa45e4d11 470 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 215 232 3.6E-44 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SCD_RS03545 1ba0f2a884473d001abd0efaa45e4d11 470 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 163 191 3.6E-44 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SCD_RS03545 1ba0f2a884473d001abd0efaa45e4d11 470 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 139 152 3.6E-44 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SCD_RS03545 1ba0f2a884473d001abd0efaa45e4d11 470 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 310 336 3.6E-44 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SCD_RS03545 1ba0f2a884473d001abd0efaa45e4d11 470 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 233 249 3.6E-44 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SCD_RS03545 1ba0f2a884473d001abd0efaa45e4d11 470 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 12 461 7.6E-144 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SCD_RS03545 1ba0f2a884473d001abd0efaa45e4d11 470 SUPERFAMILY SSF51735 7 186 2.25E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS00815 d18fffc6b183c1ec9814ca2cf70271e6 475 SUPERFAMILY SSF52540 87 369 1.41E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00815 d18fffc6b183c1ec9814ca2cf70271e6 475 Pfam PF00271 Helicase conserved C-terminal domain 247 350 1.3E-24 T 22-04-2016 IPR001650 Helicase, C-terminal SCD_RS00815 d18fffc6b183c1ec9814ca2cf70271e6 475 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 166 174 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SCD_RS00815 d18fffc6b183c1ec9814ca2cf70271e6 475 Gene3D G3DSA:3.40.50.300 15 222 4.0E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00815 d18fffc6b183c1ec9814ca2cf70271e6 475 Gene3D G3DSA:3.40.50.300 229 380 1.5E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00815 d18fffc6b183c1ec9814ca2cf70271e6 475 SMART SM00487 37 234 3.2E-59 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SCD_RS00815 d18fffc6b183c1ec9814ca2cf70271e6 475 Pfam PF03880 DbpA RNA binding domain 401 471 3.6E-21 T 22-04-2016 IPR005580 DbpA, RNA-binding domain SCD_RS00815 d18fffc6b183c1ec9814ca2cf70271e6 475 Pfam PF00270 DEAD/DEAH box helicase 42 206 1.4E-46 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SCD_RS00815 d18fffc6b183c1ec9814ca2cf70271e6 475 PANTHER PTHR24031 18 456 3.4E-232 T 22-04-2016 SCD_RS00815 d18fffc6b183c1ec9814ca2cf70271e6 475 PANTHER PTHR24031:SF180 18 456 3.4E-232 T 22-04-2016 SCD_RS00815 d18fffc6b183c1ec9814ca2cf70271e6 475 SMART SM00490 270 351 1.4E-22 T 22-04-2016 IPR001650 Helicase, C-terminal SCD_RS07380 7f6b8db98097a8002d97f41dc5ed95e0 386 PANTHER PTHR11739 16 386 9.7E-156 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SCD_RS07380 7f6b8db98097a8002d97f41dc5ed95e0 386 PIRSF PIRSF001369 7 383 1.3E-111 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 SCD_RS07380 7f6b8db98097a8002d97f41dc5ed95e0 386 Gene3D G3DSA:1.10.230.10 245 329 2.1E-27 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain SCD_RS07380 7f6b8db98097a8002d97f41dc5ed95e0 386 PANTHER PTHR11739:SF12 16 386 9.7E-156 T 22-04-2016 SCD_RS07380 7f6b8db98097a8002d97f41dc5ed95e0 386 Gene3D G3DSA:1.10.580.10 21 244 1.0E-77 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 SCD_RS07380 7f6b8db98097a8002d97f41dc5ed95e0 386 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 15 382 2.8E-152 T 22-04-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 SCD_RS07380 7f6b8db98097a8002d97f41dc5ed95e0 386 ProSitePatterns PS00480 Citrate synthase signature. 265 277 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 SCD_RS07380 7f6b8db98097a8002d97f41dc5ed95e0 386 Pfam PF00285 Citrate synthase, C-terminal domain 16 364 8.1E-113 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SCD_RS07380 7f6b8db98097a8002d97f41dc5ed95e0 386 PRINTS PR00143 Citrate synthase signature 315 331 5.4E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SCD_RS07380 7f6b8db98097a8002d97f41dc5ed95e0 386 PRINTS PR00143 Citrate synthase signature 258 278 5.4E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SCD_RS07380 7f6b8db98097a8002d97f41dc5ed95e0 386 PRINTS PR00143 Citrate synthase signature 183 198 5.4E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SCD_RS07380 7f6b8db98097a8002d97f41dc5ed95e0 386 PRINTS PR00143 Citrate synthase signature 133 146 5.4E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SCD_RS07380 7f6b8db98097a8002d97f41dc5ed95e0 386 PRINTS PR00143 Citrate synthase signature 205 233 5.4E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SCD_RS07380 7f6b8db98097a8002d97f41dc5ed95e0 386 PRINTS PR00143 Citrate synthase signature 335 349 5.4E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SCD_RS07380 7f6b8db98097a8002d97f41dc5ed95e0 386 SUPERFAMILY SSF48256 16 382 1.13E-124 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SCD_RS14035 8b0ee73b1202f44bef74fd2d4402c2f4 689 Pfam PF13089 Polyphosphate kinase N-terminal domain 10 115 1.9E-36 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 SCD_RS14035 8b0ee73b1202f44bef74fd2d4402c2f4 689 SUPERFAMILY SSF56024 321 497 1.22E-60 T 22-04-2016 SCD_RS14035 8b0ee73b1202f44bef74fd2d4402c2f4 689 PANTHER PTHR30218 8 687 0.0 T 22-04-2016 SCD_RS14035 8b0ee73b1202f44bef74fd2d4402c2f4 689 Pfam PF02503 Polyphosphate kinase middle domain 125 327 2.4E-60 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 SCD_RS14035 8b0ee73b1202f44bef74fd2d4402c2f4 689 Gene3D G3DSA:3.30.870.10 506 686 8.3E-73 T 22-04-2016 SCD_RS14035 8b0ee73b1202f44bef74fd2d4402c2f4 689 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 9 684 2.8E-299 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SCD_RS14035 8b0ee73b1202f44bef74fd2d4402c2f4 689 SUPERFAMILY SSF143724 113 318 4.9E-67 T 22-04-2016 SCD_RS14035 8b0ee73b1202f44bef74fd2d4402c2f4 689 Pfam PF13090 Polyphosphate kinase C-terminal domain 335 683 2.2E-157 T 22-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 SCD_RS14035 8b0ee73b1202f44bef74fd2d4402c2f4 689 PANTHER PTHR30218:SF0 8 687 0.0 T 22-04-2016 SCD_RS14035 8b0ee73b1202f44bef74fd2d4402c2f4 689 SUPERFAMILY SSF56024 505 686 1.44E-70 T 22-04-2016 SCD_RS14035 8b0ee73b1202f44bef74fd2d4402c2f4 689 SUPERFAMILY SSF140356 7 110 1.03E-35 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 SCD_RS14035 8b0ee73b1202f44bef74fd2d4402c2f4 689 Gene3D G3DSA:3.30.1840.10 113 305 2.3E-71 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 SCD_RS14035 8b0ee73b1202f44bef74fd2d4402c2f4 689 Hamap MF_00347 Polyphosphate kinase [ppk]. 7 687 33.55 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SCD_RS14035 8b0ee73b1202f44bef74fd2d4402c2f4 689 Gene3D G3DSA:3.30.870.10 321 505 3.9E-81 T 22-04-2016 SCD_RS14035 8b0ee73b1202f44bef74fd2d4402c2f4 689 PIRSF PIRSF015589 2 689 7.9E-282 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SCD_RS02630 d89354bfb808be970d3169672d0ee4fa 230 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 44 229 4.8E-53 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SCD_RS02630 d89354bfb808be970d3169672d0ee4fa 230 Pfam PF02390 Putative methyltransferase 58 224 2.9E-55 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SCD_RS02630 d89354bfb808be970d3169672d0ee4fa 230 Gene3D G3DSA:3.40.50.150 35 189 1.2E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS02630 d89354bfb808be970d3169672d0ee4fa 230 PANTHER PTHR23417:SF14 1 229 1.3E-68 T 22-04-2016 SCD_RS02630 d89354bfb808be970d3169672d0ee4fa 230 PANTHER PTHR23417 1 229 1.3E-68 T 22-04-2016 SCD_RS02630 d89354bfb808be970d3169672d0ee4fa 230 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 18 230 29.333 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SCD_RS02630 d89354bfb808be970d3169672d0ee4fa 230 SUPERFAMILY SSF53335 11 230 4.59E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS14495 3482cf011899413d149addcb4259050e 429 Pfam PF00202 Aminotransferase class-III 34 396 2.2E-81 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SCD_RS14495 3482cf011899413d149addcb4259050e 429 Gene3D G3DSA:3.40.640.10 71 317 2.8E-81 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS14495 3482cf011899413d149addcb4259050e 429 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 4 426 102.853 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 SCD_RS14495 3482cf011899413d149addcb4259050e 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 271 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SCD_RS14495 3482cf011899413d149addcb4259050e 429 Gene3D G3DSA:3.90.1150.10 2 70 9.3E-47 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS14495 3482cf011899413d149addcb4259050e 429 Gene3D G3DSA:3.90.1150.10 320 423 9.3E-47 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS14495 3482cf011899413d149addcb4259050e 429 PANTHER PTHR11986 2 429 2.6E-219 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SCD_RS14495 3482cf011899413d149addcb4259050e 429 SUPERFAMILY SSF53383 3 423 1.04E-134 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS14495 3482cf011899413d149addcb4259050e 429 PANTHER PTHR11986:SF5 2 429 2.6E-219 T 22-04-2016 SCD_RS14495 3482cf011899413d149addcb4259050e 429 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 5 423 2.0E-187 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 SCD_RS04585 d96e1194cdd8a5113061d2e16ca7b359 100 Pfam PF01985 CRS1 / YhbY (CRM) domain 5 88 3.5E-18 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SCD_RS04585 d96e1194cdd8a5113061d2e16ca7b359 100 SMART SM01103 5 88 1.6E-33 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SCD_RS04585 d96e1194cdd8a5113061d2e16ca7b359 100 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 11 98 6.0E-21 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SCD_RS04585 d96e1194cdd8a5113061d2e16ca7b359 100 PANTHER PTHR31846 3 99 5.6E-16 T 22-04-2016 SCD_RS04585 d96e1194cdd8a5113061d2e16ca7b359 100 Gene3D G3DSA:3.30.110.60 4 94 4.9E-27 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SCD_RS04585 d96e1194cdd8a5113061d2e16ca7b359 100 SUPERFAMILY SSF75471 4 96 3.53E-26 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SCD_RS00155 a4f6a93bbabcc765de27b601328d9c6d 595 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 409 423 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SCD_RS00155 a4f6a93bbabcc765de27b601328d9c6d 595 PANTHER PTHR30258:SF13 17 590 6.1E-273 T 22-04-2016 SCD_RS00155 a4f6a93bbabcc765de27b601328d9c6d 595 SUPERFAMILY SSF160246 16 165 2.88E-12 T 22-04-2016 SCD_RS00155 a4f6a93bbabcc765de27b601328d9c6d 595 Pfam PF00437 Type II/IV secretion system protein 219 481 6.7E-70 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SCD_RS00155 a4f6a93bbabcc765de27b601328d9c6d 595 PANTHER PTHR30258 17 590 6.1E-273 T 22-04-2016 SCD_RS00155 a4f6a93bbabcc765de27b601328d9c6d 595 SMART SM00382 342 463 8.2E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS00155 a4f6a93bbabcc765de27b601328d9c6d 595 Gene3D G3DSA:3.40.50.300 321 589 6.7E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00155 a4f6a93bbabcc765de27b601328d9c6d 595 Gene3D G3DSA:3.30.450.90 200 314 2.8E-42 T 22-04-2016 SCD_RS00155 a4f6a93bbabcc765de27b601328d9c6d 595 SUPERFAMILY SSF52540 204 588 1.29E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00155 a4f6a93bbabcc765de27b601328d9c6d 595 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 67 169 1.2E-12 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 SCD_RS09155 53c85c41112444ade9946de18c99a4ab 448 SUPERFAMILY SSF109604 251 446 5.02E-32 T 22-04-2016 SCD_RS09155 53c85c41112444ade9946de18c99a4ab 448 PANTHER PTHR33525:SF4 46 372 1.9E-55 T 22-04-2016 SCD_RS09155 53c85c41112444ade9946de18c99a4ab 448 Pfam PF08668 HDOD domain 259 366 2.0E-8 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS09155 53c85c41112444ade9946de18c99a4ab 448 PANTHER PTHR33525 46 372 1.9E-55 T 22-04-2016 SCD_RS09155 53c85c41112444ade9946de18c99a4ab 448 PIRSF PIRSF003180 44 448 1.6E-90 T 22-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing SCD_RS09155 53c85c41112444ade9946de18c99a4ab 448 Gene3D G3DSA:1.10.3150.10 218 446 5.0E-25 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS09155 53c85c41112444ade9946de18c99a4ab 448 SUPERFAMILY SSF141868 50 235 3.53E-15 T 22-04-2016 IPR001633 EAL domain SCD_RS01635 53d889b52b9ab2dab20e2c3e803eaab5 214 PANTHER PTHR12725 5 187 1.6E-27 T 22-04-2016 SCD_RS01635 53d889b52b9ab2dab20e2c3e803eaab5 214 Gene3D G3DSA:3.40.50.1000 5 206 7.7E-32 T 22-04-2016 IPR023214 HAD-like domain SCD_RS01635 53d889b52b9ab2dab20e2c3e803eaab5 214 TIGRFAM TIGR01993 Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 6 186 1.3E-53 T 22-04-2016 IPR010237 Pyrimidine 5-nucleotidase SCD_RS01635 53d889b52b9ab2dab20e2c3e803eaab5 214 SUPERFAMILY SSF56784 5 207 7.52E-36 T 22-04-2016 IPR023214 HAD-like domain SCD_RS01635 53d889b52b9ab2dab20e2c3e803eaab5 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 186 3.9E-17 T 22-04-2016 IPR023214 HAD-like domain SCD_RS01635 53d889b52b9ab2dab20e2c3e803eaab5 214 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 7 186 5.1E-17 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SCD_RS08210 268c8255739cd1f96abce3b2d1bb3c0f 255 SUPERFAMILY SSF53335 30 202 1.98E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS08210 268c8255739cd1f96abce3b2d1bb3c0f 255 Gene3D G3DSA:3.40.50.150 5 219 2.2E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS08210 268c8255739cd1f96abce3b2d1bb3c0f 255 Pfam PF13847 Methyltransferase domain 48 151 7.6E-14 T 22-04-2016 IPR025714 Methyltransferase domain SCD_RS12515 003e136385f6520cec45e15a1bf55038 126 PANTHER PTHR38590:SF1 1 118 3.2E-47 T 22-04-2016 SCD_RS12515 003e136385f6520cec45e15a1bf55038 126 PANTHER PTHR38590 1 118 3.2E-47 T 22-04-2016 SCD_RS12515 003e136385f6520cec45e15a1bf55038 126 Pfam PF04480 Protein of unknown function (DUF559) 4 110 7.8E-44 T 22-04-2016 IPR007569 Domain of unknown function DUF559 SCD_RS12515 003e136385f6520cec45e15a1bf55038 126 SUPERFAMILY SSF52980 7 112 2.25E-21 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SCD_RS05715 8cc13d05288f6d07c5097c516553b2a1 414 PANTHER PTHR30574 15 353 5.6E-20 T 22-04-2016 SCD_RS05715 8cc13d05288f6d07c5097c516553b2a1 414 Pfam PF04143 Sulphur transport 18 164 3.2E-22 T 22-04-2016 IPR007272 Sulphur transport domain SCD_RS05715 8cc13d05288f6d07c5097c516553b2a1 414 Pfam PF04143 Sulphur transport 242 404 2.0E-25 T 22-04-2016 IPR007272 Sulphur transport domain SCD_RS15730 72c867757ebd15e142082e7c71813d46 832 Pfam PF08447 PAS fold 431 511 2.9E-7 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SCD_RS15730 72c867757ebd15e142082e7c71813d46 832 SMART SM00267 638 824 2.2E-57 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15730 72c867757ebd15e142082e7c71813d46 832 SUPERFAMILY SSF55785 533 635 5.93E-28 T 22-04-2016 IPR000014 PAS domain SCD_RS15730 72c867757ebd15e142082e7c71813d46 832 Pfam PF00990 Diguanylate cyclase, GGDEF domain 649 819 3.0E-44 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15730 72c867757ebd15e142082e7c71813d46 832 SUPERFAMILY SSF55785 425 519 1.74E-10 T 22-04-2016 IPR000014 PAS domain SCD_RS15730 72c867757ebd15e142082e7c71813d46 832 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 646 822 2.8E-40 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15730 72c867757ebd15e142082e7c71813d46 832 Pfam PF07696 7TMR-DISM extracellular 2 15 147 1.3E-18 T 22-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 SCD_RS15730 72c867757ebd15e142082e7c71813d46 832 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 531 642 9.6E-18 T 22-04-2016 IPR000014 PAS domain SCD_RS15730 72c867757ebd15e142082e7c71813d46 832 Gene3D G3DSA:3.30.450.20 382 528 2.5E-23 T 22-04-2016 SCD_RS15730 72c867757ebd15e142082e7c71813d46 832 Pfam PF07695 7TM diverse intracellular signalling 160 361 3.4E-36 T 22-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 SCD_RS15730 72c867757ebd15e142082e7c71813d46 832 PANTHER PTHR10799:SF774 511 650 1.4E-35 T 22-04-2016 SCD_RS15730 72c867757ebd15e142082e7c71813d46 832 Pfam PF13426 PAS domain 535 636 2.2E-15 T 22-04-2016 IPR000014 PAS domain SCD_RS15730 72c867757ebd15e142082e7c71813d46 832 SMART SM00091 524 594 0.0022 T 22-04-2016 IPR000014 PAS domain SCD_RS15730 72c867757ebd15e142082e7c71813d46 832 Gene3D G3DSA:3.30.70.270 651 829 8.3E-54 T 22-04-2016 SCD_RS15730 72c867757ebd15e142082e7c71813d46 832 SMART SM00086 596 638 4.6E-4 T 22-04-2016 IPR001610 PAC motif SCD_RS15730 72c867757ebd15e142082e7c71813d46 832 SMART SM00086 474 517 4.9E-7 T 22-04-2016 IPR001610 PAC motif SCD_RS15730 72c867757ebd15e142082e7c71813d46 832 Gene3D G3DSA:3.30.450.20 533 636 5.9E-27 T 22-04-2016 SCD_RS15730 72c867757ebd15e142082e7c71813d46 832 SUPERFAMILY SSF55073 654 826 1.26E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS15730 72c867757ebd15e142082e7c71813d46 832 PANTHER PTHR10799 682 819 1.4E-35 T 22-04-2016 SCD_RS15730 72c867757ebd15e142082e7c71813d46 832 PANTHER PTHR10799 511 650 1.4E-35 T 22-04-2016 SCD_RS15730 72c867757ebd15e142082e7c71813d46 832 PANTHER PTHR10799:SF774 682 819 1.4E-35 T 22-04-2016 SCD_RS04460 9b1a94028e68b2c53193ac9aefb4da1d 367 SUPERFAMILY SSF48452 63 174 6.79E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS04460 9b1a94028e68b2c53193ac9aefb4da1d 367 Gene3D G3DSA:3.10.450.50 255 363 1.2E-6 T 22-04-2016 IPR032710 NTF2-like domain SCD_RS04460 9b1a94028e68b2c53193ac9aefb4da1d 367 SMART SM00028 100 133 2.0E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS04460 9b1a94028e68b2c53193ac9aefb4da1d 367 SMART SM00028 134 162 40.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS04460 9b1a94028e68b2c53193ac9aefb4da1d 367 SMART SM00028 66 99 2.5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS04460 9b1a94028e68b2c53193ac9aefb4da1d 367 PANTHER PTHR23083 36 172 9.3E-20 T 22-04-2016 SCD_RS04460 9b1a94028e68b2c53193ac9aefb4da1d 367 Gene3D G3DSA:1.25.40.10 36 170 5.5E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS04460 9b1a94028e68b2c53193ac9aefb4da1d 367 SUPERFAMILY SSF54427 256 362 7.6E-16 T 22-04-2016 IPR032710 NTF2-like domain SCD_RS04460 9b1a94028e68b2c53193ac9aefb4da1d 367 Pfam PF14559 Tetratricopeptide repeat 76 136 7.4E-8 T 22-04-2016 SCD_RS01790 992b5c0e5f6e20b988c3597ce76dda1a 565 PIRSF PIRSF004983 2 564 5.5E-164 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SCD_RS01790 992b5c0e5f6e20b988c3597ce76dda1a 565 Gene3D G3DSA:3.40.50.970 364 555 9.3E-31 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS01790 992b5c0e5f6e20b988c3597ce76dda1a 565 SUPERFAMILY SSF52518 8 186 2.52E-35 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS01790 992b5c0e5f6e20b988c3597ce76dda1a 565 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 11 440 5.1E-135 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SCD_RS01790 992b5c0e5f6e20b988c3597ce76dda1a 565 PANTHER PTHR18968 3 563 2.2E-162 T 22-04-2016 SCD_RS01790 992b5c0e5f6e20b988c3597ce76dda1a 565 SUPERFAMILY SSF52518 394 557 1.11E-28 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS01790 992b5c0e5f6e20b988c3597ce76dda1a 565 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 5 562 35.251 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SCD_RS01790 992b5c0e5f6e20b988c3597ce76dda1a 565 Pfam PF16582 Middle domain of thiamine pyrophosphate 216 390 1.8E-7 T 22-04-2016 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SCD_RS01790 992b5c0e5f6e20b988c3597ce76dda1a 565 PANTHER PTHR18968:SF114 3 563 2.2E-162 T 22-04-2016 SCD_RS01790 992b5c0e5f6e20b988c3597ce76dda1a 565 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 10 179 2.2E-32 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SCD_RS01790 992b5c0e5f6e20b988c3597ce76dda1a 565 Gene3D G3DSA:3.40.50.970 8 181 1.4E-47 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS01790 992b5c0e5f6e20b988c3597ce76dda1a 565 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 422 544 1.8E-12 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SCD_RS01790 992b5c0e5f6e20b988c3597ce76dda1a 565 SUPERFAMILY SSF52467 168 363 3.4E-7 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SCD_RS08080 1d239a3497c1bc7f8a2383dbf7d96052 185 Pfam PF01765 Ribosome recycling factor 21 183 8.9E-60 T 22-04-2016 IPR023584 Ribosome recycling factor domain SCD_RS08080 1d239a3497c1bc7f8a2383dbf7d96052 185 SUPERFAMILY SSF55194 4 183 9.16E-69 T 22-04-2016 IPR023584 Ribosome recycling factor domain SCD_RS08080 1d239a3497c1bc7f8a2383dbf7d96052 185 PANTHER PTHR20982 1 185 2.2E-73 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SCD_RS08080 1d239a3497c1bc7f8a2383dbf7d96052 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.7E-68 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SCD_RS08080 1d239a3497c1bc7f8a2383dbf7d96052 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.785 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SCD_RS08080 1d239a3497c1bc7f8a2383dbf7d96052 185 Gene3D G3DSA:1.10.132.20 67 184 4.0E-44 T 22-04-2016 IPR023584 Ribosome recycling factor domain SCD_RS09115 db496d24bafe66d172408c8fa5273757 259 Pfam PF02535 ZIP Zinc transporter 99 249 9.4E-27 T 22-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 SCD_RS09115 db496d24bafe66d172408c8fa5273757 259 PANTHER PTHR16950 8 256 5.0E-32 T 22-04-2016 SCD_RS09115 db496d24bafe66d172408c8fa5273757 259 PANTHER PTHR16950:SF16 8 256 5.0E-32 T 22-04-2016 SCD_RS09195 e9ca536e9308c12e7e52fe83f1ed6829 227 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 33 203 4.7E-78 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 SCD_RS09195 e9ca536e9308c12e7e52fe83f1ed6829 227 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 32 216 3.9E-64 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 SCD_RS09195 e9ca536e9308c12e7e52fe83f1ed6829 227 SUPERFAMILY SSF55729 2 225 1.38E-95 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS09195 e9ca536e9308c12e7e52fe83f1ed6829 227 PANTHER PTHR30098 4 225 1.4E-79 T 22-04-2016 SCD_RS09195 e9ca536e9308c12e7e52fe83f1ed6829 227 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 227 101.717 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 SCD_RS02970 9d90451c26a531d1c67b1d088019f773 623 PANTHER PTHR10799 406 609 4.2E-33 T 22-04-2016 SCD_RS02970 9d90451c26a531d1c67b1d088019f773 623 SUPERFAMILY SSF55073 455 610 4.08E-50 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS02970 9d90451c26a531d1c67b1d088019f773 623 PANTHER PTHR10799:SF750 406 609 4.2E-33 T 22-04-2016 SCD_RS02970 9d90451c26a531d1c67b1d088019f773 623 Pfam PF00990 Diguanylate cyclase, GGDEF domain 451 607 1.0E-48 T 22-04-2016 IPR000160 GGDEF domain SCD_RS02970 9d90451c26a531d1c67b1d088019f773 623 Gene3D G3DSA:3.30.70.270 452 615 1.3E-54 T 22-04-2016 SCD_RS02970 9d90451c26a531d1c67b1d088019f773 623 SMART SM00267 439 611 9.8E-62 T 22-04-2016 IPR000160 GGDEF domain SCD_RS02970 9d90451c26a531d1c67b1d088019f773 623 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 448 608 3.1E-56 T 22-04-2016 IPR000160 GGDEF domain SCD_RS11595 b27aca7df12d5a21a4c35ed0d70e1ae4 304 Gene3D G3DSA:3.40.50.300 115 177 4.0E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11595 b27aca7df12d5a21a4c35ed0d70e1ae4 304 TIGRFAM TIGR04352 HprK_rel_A: HprK-related kinase A 21 299 2.6E-125 T 22-04-2016 IPR027600 HprK-related kinase A SCD_RS11595 b27aca7df12d5a21a4c35ed0d70e1ae4 304 SUPERFAMILY SSF53795 115 277 6.1E-14 T 22-04-2016 SCD_RS04005 f5bc1dbb931be59f5f80ff09a3233211 436 Gene3D G3DSA:2.40.160.60 24 436 1.7E-89 T 22-04-2016 SCD_RS04005 f5bc1dbb931be59f5f80ff09a3233211 436 PANTHER PTHR35093 1 436 2.0E-35 T 22-04-2016 SCD_RS04005 f5bc1dbb931be59f5f80ff09a3233211 436 SUPERFAMILY SSF56935 25 435 3.72E-53 T 22-04-2016 SCD_RS04005 f5bc1dbb931be59f5f80ff09a3233211 436 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 36 408 1.1E-35 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) SCD_RS05205 bd7d128b437fbe967d578a9b40a3b871 229 PANTHER PTHR23291:SF37 6 221 9.3E-57 T 22-04-2016 SCD_RS05205 bd7d128b437fbe967d578a9b40a3b871 229 PANTHER PTHR23291 6 221 9.3E-57 T 22-04-2016 IPR006214 Bax inhibitor 1-related SCD_RS05205 bd7d128b437fbe967d578a9b40a3b871 229 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 221 3.0E-46 T 22-04-2016 SCD_RS00400 02faa8e7193172a3cf479b98137860e3 316 SUPERFAMILY SSF52440 1 121 5.18E-41 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SCD_RS00400 02faa8e7193172a3cf479b98137860e3 316 SUPERFAMILY SSF56059 122 310 3.53E-58 T 22-04-2016 SCD_RS00400 02faa8e7193172a3cf479b98137860e3 316 Gene3D G3DSA:3.30.470.20 191 299 1.7E-47 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SCD_RS00400 02faa8e7193172a3cf479b98137860e3 316 PANTHER PTHR21621 1 310 3.5E-133 T 22-04-2016 SCD_RS00400 02faa8e7193172a3cf479b98137860e3 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 119 5.2E-44 T 22-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 SCD_RS00400 02faa8e7193172a3cf479b98137860e3 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 163.497 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 SCD_RS00400 02faa8e7193172a3cf479b98137860e3 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 123 296 4.9E-78 T 22-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 SCD_RS00400 02faa8e7193172a3cf479b98137860e3 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 1 311 7.6E-135 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 SCD_RS00400 02faa8e7193172a3cf479b98137860e3 316 PANTHER PTHR21621:SF4 1 310 3.5E-133 T 22-04-2016 SCD_RS00400 02faa8e7193172a3cf479b98137860e3 316 Gene3D G3DSA:3.30.1490.20 136 190 1.1E-30 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SCD_RS00400 02faa8e7193172a3cf479b98137860e3 316 Gene3D G3DSA:3.40.50.20 1 127 2.0E-49 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SCD_RS12440 8e33cd6766186502369f708e2afe8fe2 355 PANTHER PTHR30605 1 354 1.9E-150 T 22-04-2016 SCD_RS12440 8e33cd6766186502369f708e2afe8fe2 355 SUPERFAMILY SSF53067 132 329 2.37E-29 T 22-04-2016 SCD_RS12440 8e33cd6766186502369f708e2afe8fe2 355 SUPERFAMILY SSF53067 57 102 2.37E-29 T 22-04-2016 SCD_RS12440 8e33cd6766186502369f708e2afe8fe2 355 SUPERFAMILY SSF53067 8 30 2.37E-29 T 22-04-2016 SCD_RS12440 8e33cd6766186502369f708e2afe8fe2 355 PANTHER PTHR30605:SF0 1 354 1.9E-150 T 22-04-2016 SCD_RS12440 8e33cd6766186502369f708e2afe8fe2 355 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 1 355 40.309 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 SCD_RS12440 8e33cd6766186502369f708e2afe8fe2 355 Gene3D G3DSA:3.30.420.40 134 315 4.1E-72 T 22-04-2016 SCD_RS12440 8e33cd6766186502369f708e2afe8fe2 355 Pfam PF03702 Uncharacterised protein family (UPF0075) 1 355 9.0E-142 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 SCD_RS11530 c1e5939c854c31ac366d78c5a06155e8 184 PANTHER PTHR23004:SF7 8 183 2.0E-61 T 22-04-2016 SCD_RS11530 c1e5939c854c31ac366d78c5a06155e8 184 PANTHER PTHR23004 8 183 2.0E-61 T 22-04-2016 SCD_RS11530 c1e5939c854c31ac366d78c5a06155e8 184 Gene3D G3DSA:1.25.40.10 84 181 8.5E-34 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS11530 c1e5939c854c31ac366d78c5a06155e8 184 Gene3D G3DSA:1.20.58.320 4 82 8.8E-28 T 22-04-2016 SCD_RS11530 c1e5939c854c31ac366d78c5a06155e8 184 Pfam PF06041 Bacterial protein of unknown function (DUF924) 10 178 2.8E-59 T 22-04-2016 IPR010323 Protein of unknown function DUF924 SCD_RS11530 c1e5939c854c31ac366d78c5a06155e8 184 SUPERFAMILY SSF48452 4 177 4.93E-62 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS02470 e508cf8c02225f46e72287151c40fd0b 151 SUPERFAMILY SSF141457 1 143 4.32E-35 T 22-04-2016 IPR024046 Flagellar assembly factor FliW domain SCD_RS02470 e508cf8c02225f46e72287151c40fd0b 151 PANTHER PTHR39190 2 135 2.5E-24 T 22-04-2016 SCD_RS02470 e508cf8c02225f46e72287151c40fd0b 151 Pfam PF02623 FliW protein 19 136 2.8E-31 T 22-04-2016 IPR003775 Flagellar assembly factor FliW GO:0044780 SCD_RS02470 e508cf8c02225f46e72287151c40fd0b 151 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 149 21.496 T 22-04-2016 IPR003775 Flagellar assembly factor FliW GO:0044780 SCD_RS02470 e508cf8c02225f46e72287151c40fd0b 151 Gene3D G3DSA:2.30.290.10 1 141 5.3E-41 T 22-04-2016 IPR024046 Flagellar assembly factor FliW domain SCD_RS08765 4f952f74e1989c72dc687b11be983efd 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SCD_RS08765 4f952f74e1989c72dc687b11be983efd 90 SMART SM00411 1 90 5.5E-35 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS08765 4f952f74e1989c72dc687b11be983efd 90 Gene3D G3DSA:4.10.520.10 1 90 5.4E-35 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SCD_RS08765 4f952f74e1989c72dc687b11be983efd 90 PANTHER PTHR33175 1 90 6.0E-37 T 22-04-2016 SCD_RS08765 4f952f74e1989c72dc687b11be983efd 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.1E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS08765 4f952f74e1989c72dc687b11be983efd 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.1E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS08765 4f952f74e1989c72dc687b11be983efd 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.1E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS08765 4f952f74e1989c72dc687b11be983efd 90 SUPERFAMILY SSF47729 1 90 2.21E-30 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SCD_RS08765 4f952f74e1989c72dc687b11be983efd 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.5E-31 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS00755 12e5f5ffff564867be955f39bd6df67e 98 PANTHER PTHR37832:SF1 1 97 1.4E-21 T 22-04-2016 SCD_RS00755 12e5f5ffff564867be955f39bd6df67e 98 Pfam PF07876 Stress responsive A/B Barrel Domain 2 97 4.0E-27 T 22-04-2016 IPR013097 Stress responsive alpha-beta barrel SCD_RS00755 12e5f5ffff564867be955f39bd6df67e 98 SUPERFAMILY SSF54909 1 97 4.47E-26 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel SCD_RS00755 12e5f5ffff564867be955f39bd6df67e 98 PANTHER PTHR37832 1 97 1.4E-21 T 22-04-2016 SCD_RS00755 12e5f5ffff564867be955f39bd6df67e 98 SMART SM00886 2 98 3.6E-35 T 22-04-2016 IPR013097 Stress responsive alpha-beta barrel SCD_RS00755 12e5f5ffff564867be955f39bd6df67e 98 Gene3D G3DSA:3.30.70.900 1 97 2.0E-31 T 22-04-2016 SCD_RS00970 dcdebb8f671df632e68fa95e32ec89fd 353 SMART SM00091 3 70 1.6E-4 T 22-04-2016 IPR000014 PAS domain SCD_RS00970 dcdebb8f671df632e68fa95e32ec89fd 353 Pfam PF00512 His Kinase A (phospho-acceptor) domain 129 189 2.4E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS00970 dcdebb8f671df632e68fa95e32ec89fd 353 Gene3D G3DSA:3.30.450.20 9 99 1.5E-17 T 22-04-2016 SCD_RS00970 dcdebb8f671df632e68fa95e32ec89fd 353 Gene3D G3DSA:1.10.287.130 120 186 9.3E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS00970 dcdebb8f671df632e68fa95e32ec89fd 353 PANTHER PTHR24423:SF488 9 348 5.8E-103 T 22-04-2016 SCD_RS00970 dcdebb8f671df632e68fa95e32ec89fd 353 PANTHER PTHR24423 9 348 5.8E-103 T 22-04-2016 SCD_RS00970 dcdebb8f671df632e68fa95e32ec89fd 353 Pfam PF00989 PAS fold 5 85 2.9E-8 T 22-04-2016 IPR013767 PAS fold GO:0006355 SCD_RS00970 dcdebb8f671df632e68fa95e32ec89fd 353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 308 326 4.6E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS00970 dcdebb8f671df632e68fa95e32ec89fd 353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 331 344 4.6E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS00970 dcdebb8f671df632e68fa95e32ec89fd 353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 293 4.6E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS00970 dcdebb8f671df632e68fa95e32ec89fd 353 SMART SM00387 232 347 2.3E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS00970 dcdebb8f671df632e68fa95e32ec89fd 353 SMART SM00388 128 193 1.1E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS00970 dcdebb8f671df632e68fa95e32ec89fd 353 Gene3D G3DSA:3.30.565.10 193 345 2.8E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS00970 dcdebb8f671df632e68fa95e32ec89fd 353 SUPERFAMILY SSF55785 7 97 2.44E-8 T 22-04-2016 IPR000014 PAS domain SCD_RS00970 dcdebb8f671df632e68fa95e32ec89fd 353 SUPERFAMILY SSF47384 119 190 1.88E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS00970 dcdebb8f671df632e68fa95e32ec89fd 353 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 233 346 4.9E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS00970 dcdebb8f671df632e68fa95e32ec89fd 353 SUPERFAMILY SSF55874 196 344 1.31E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS13935 7155c3dd8a61344edc420a42eb2cf4d9 460 PANTHER PTHR31223 361 386 7.4E-151 T 22-04-2016 SCD_RS13935 7155c3dd8a61344edc420a42eb2cf4d9 460 PANTHER PTHR31223 93 344 7.4E-151 T 22-04-2016 SCD_RS13935 7155c3dd8a61344edc420a42eb2cf4d9 460 Pfam PF03641 Possible lysine decarboxylase 192 330 2.5E-31 T 22-04-2016 IPR031100 LOG family SCD_RS13935 7155c3dd8a61344edc420a42eb2cf4d9 460 PANTHER PTHR31223:SF12 361 386 7.4E-151 T 22-04-2016 SCD_RS13935 7155c3dd8a61344edc420a42eb2cf4d9 460 PANTHER PTHR31223:SF12 93 344 7.4E-151 T 22-04-2016 SCD_RS13935 7155c3dd8a61344edc420a42eb2cf4d9 460 Pfam PF11892 Domain of unknown function (DUF3412) 336 455 1.1E-54 T 22-04-2016 IPR021826 Protein of unknown function DUF3412 SCD_RS13935 7155c3dd8a61344edc420a42eb2cf4d9 460 Pfam PF14793 Domain of unknown function (DUF4478) 8 116 2.5E-45 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 SCD_RS13935 7155c3dd8a61344edc420a42eb2cf4d9 460 SUPERFAMILY SSF102405 124 330 9.31E-41 T 22-04-2016 SCD_RS13935 7155c3dd8a61344edc420a42eb2cf4d9 460 Gene3D G3DSA:3.30.1850.10 6 117 1.2E-45 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 SCD_RS13935 7155c3dd8a61344edc420a42eb2cf4d9 460 Gene3D G3DSA:3.40.50.450 129 454 7.7E-118 T 22-04-2016 SCD_RS07400 c51bcffc13530c7b7559a62f792c790c 125 Gene3D G3DSA:1.20.1300.10 2 123 1.4E-33 T 22-04-2016 SCD_RS07400 c51bcffc13530c7b7559a62f792c790c 125 PIRSF PIRSF000178 1 124 4.5E-24 T 22-04-2016 SCD_RS07400 c51bcffc13530c7b7559a62f792c790c 125 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 80 93 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 SCD_RS07400 c51bcffc13530c7b7559a62f792c790c 125 PANTHER PTHR10978:SF4 1 122 5.5E-20 T 22-04-2016 SCD_RS07400 c51bcffc13530c7b7559a62f792c790c 125 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 5 29 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 SCD_RS07400 c51bcffc13530c7b7559a62f792c790c 125 PANTHER PTHR10978 1 122 5.5E-20 T 22-04-2016 SCD_RS07400 c51bcffc13530c7b7559a62f792c790c 125 SUPERFAMILY SSF81343 2 123 4.58E-27 T 22-04-2016 SCD_RS07400 c51bcffc13530c7b7559a62f792c790c 125 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 1 118 2.1E-26 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 SCD_RS07400 c51bcffc13530c7b7559a62f792c790c 125 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 3 120 6.1E-35 T 22-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 SCD_RS05990 81a48371c2a525f44e1b7ca2e525f5ed 965 Gene3D G3DSA:2.40.40.20 764 932 1.7E-47 T 22-04-2016 SCD_RS05990 81a48371c2a525f44e1b7ca2e525f5ed 965 PANTHER PTHR11615 728 944 3.8E-132 T 22-04-2016 SCD_RS05990 81a48371c2a525f44e1b7ca2e525f5ed 965 PANTHER PTHR11615 450 659 3.8E-132 T 22-04-2016 SCD_RS05990 81a48371c2a525f44e1b7ca2e525f5ed 965 PANTHER PTHR11615 15 281 3.8E-132 T 22-04-2016 SCD_RS05990 81a48371c2a525f44e1b7ca2e525f5ed 965 PANTHER PTHR11615 350 432 3.8E-132 T 22-04-2016 SCD_RS05990 81a48371c2a525f44e1b7ca2e525f5ed 965 Gene3D G3DSA:3.40.228.10 153 269 6.3E-60 T 22-04-2016 SCD_RS05990 81a48371c2a525f44e1b7ca2e525f5ed 965 Gene3D G3DSA:3.40.228.10 331 460 6.3E-60 T 22-04-2016 SCD_RS05990 81a48371c2a525f44e1b7ca2e525f5ed 965 Gene3D G3DSA:3.40.50.740 506 630 2.7E-39 T 22-04-2016 SCD_RS05990 81a48371c2a525f44e1b7ca2e525f5ed 965 Gene3D G3DSA:3.40.50.740 74 152 2.7E-39 T 22-04-2016 SCD_RS05990 81a48371c2a525f44e1b7ca2e525f5ed 965 PANTHER PTHR11615:SF164 728 944 3.8E-132 T 22-04-2016 SCD_RS05990 81a48371c2a525f44e1b7ca2e525f5ed 965 PANTHER PTHR11615:SF164 450 659 3.8E-132 T 22-04-2016 SCD_RS05990 81a48371c2a525f44e1b7ca2e525f5ed 965 PANTHER PTHR11615:SF164 15 281 3.8E-132 T 22-04-2016 SCD_RS05990 81a48371c2a525f44e1b7ca2e525f5ed 965 PANTHER PTHR11615:SF164 350 432 3.8E-132 T 22-04-2016 SCD_RS05990 81a48371c2a525f44e1b7ca2e525f5ed 965 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 17 68 4.7E-16 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SCD_RS05990 81a48371c2a525f44e1b7ca2e525f5ed 965 Pfam PF01568 Molydopterin dinucleotide binding domain 790 891 7.0E-12 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SCD_RS05990 81a48371c2a525f44e1b7ca2e525f5ed 965 SMART SM00926 15 69 5.7E-19 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SCD_RS05990 81a48371c2a525f44e1b7ca2e525f5ed 965 Pfam PF00384 Molybdopterin oxidoreductase 72 624 4.2E-34 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SCD_RS05990 81a48371c2a525f44e1b7ca2e525f5ed 965 SUPERFAMILY SSF53706 15 765 8.77E-156 T 22-04-2016 SCD_RS05990 81a48371c2a525f44e1b7ca2e525f5ed 965 SUPERFAMILY SSF50692 782 929 2.49E-32 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SCD_RS05990 81a48371c2a525f44e1b7ca2e525f5ed 965 Gene3D G3DSA:2.20.25.90 15 73 6.0E-22 T 22-04-2016 SCD_RS06350 7f1016bfc692bd9653dd7a38bba8ec3e 486 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 453 1.6E-194 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SCD_RS06350 7f1016bfc692bd9653dd7a38bba8ec3e 486 PANTHER PTHR11911 298 483 4.9E-249 T 22-04-2016 SCD_RS06350 7f1016bfc692bd9653dd7a38bba8ec3e 486 PANTHER PTHR11911 5 280 4.9E-249 T 22-04-2016 SCD_RS06350 7f1016bfc692bd9653dd7a38bba8ec3e 486 SUPERFAMILY SSF51412 215 476 9.03E-127 T 22-04-2016 SCD_RS06350 7f1016bfc692bd9653dd7a38bba8ec3e 486 SUPERFAMILY SSF51412 2 89 9.03E-127 T 22-04-2016 SCD_RS06350 7f1016bfc692bd9653dd7a38bba8ec3e 486 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 472 2.9E-164 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 SCD_RS06350 7f1016bfc692bd9653dd7a38bba8ec3e 486 PIRSF PIRSF000130 1 486 2.9E-206 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SCD_RS06350 7f1016bfc692bd9653dd7a38bba8ec3e 486 PANTHER PTHR11911:SF6 298 483 4.9E-249 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SCD_RS06350 7f1016bfc692bd9653dd7a38bba8ec3e 486 PANTHER PTHR11911:SF6 5 280 4.9E-249 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SCD_RS06350 7f1016bfc692bd9653dd7a38bba8ec3e 486 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 SCD_RS06350 7f1016bfc692bd9653dd7a38bba8ec3e 486 Gene3D G3DSA:3.20.20.70 5 484 1.4E-202 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS06350 7f1016bfc692bd9653dd7a38bba8ec3e 486 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 485 85.784 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SCD_RS06350 7f1016bfc692bd9653dd7a38bba8ec3e 486 SMART SM00116 95 142 5.4E-10 T 22-04-2016 IPR000644 CBS domain SCD_RS06350 7f1016bfc692bd9653dd7a38bba8ec3e 486 SMART SM00116 156 204 7.1E-8 T 22-04-2016 IPR000644 CBS domain SCD_RS06350 7f1016bfc692bd9653dd7a38bba8ec3e 486 SUPERFAMILY SSF54631 94 201 1.0E-29 T 22-04-2016 SCD_RS06350 7f1016bfc692bd9653dd7a38bba8ec3e 486 SMART SM01240 6 472 0.0 T 22-04-2016 SCD_RS06350 7f1016bfc692bd9653dd7a38bba8ec3e 486 Pfam PF00571 CBS domain 149 199 1.1E-6 T 22-04-2016 IPR000644 CBS domain SCD_RS06350 7f1016bfc692bd9653dd7a38bba8ec3e 486 Pfam PF00571 CBS domain 94 138 3.9E-9 T 22-04-2016 IPR000644 CBS domain SCD_RS06800 d0be475257d25fbf21f974e26c41eeab 246 Pfam PF01564 Spermine/spermidine synthase 38 163 1.0E-11 T 22-04-2016 SCD_RS06800 d0be475257d25fbf21f974e26c41eeab 246 SUPERFAMILY SSF53335 5 207 7.45E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS06800 d0be475257d25fbf21f974e26c41eeab 246 Gene3D G3DSA:3.40.50.150 9 207 9.7E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS13845 2e220888b398d17239c87743804d6681 306 SUPERFAMILY SSF53850 3 216 1.34E-85 T 22-04-2016 SCD_RS13845 2e220888b398d17239c87743804d6681 306 PANTHER PTHR11557 4 306 1.1E-161 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS13845 2e220888b398d17239c87743804d6681 306 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 224 293 2.3E-18 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS13845 2e220888b398d17239c87743804d6681 306 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 1.8E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS13845 2e220888b398d17239c87743804d6681 306 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 1.8E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS13845 2e220888b398d17239c87743804d6681 306 PRINTS PR00151 Porphobilinogen deaminase signature 228 245 1.8E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS13845 2e220888b398d17239c87743804d6681 306 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 1.8E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS13845 2e220888b398d17239c87743804d6681 306 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 1.8E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS13845 2e220888b398d17239c87743804d6681 306 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 229 245 - T 22-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS13845 2e220888b398d17239c87743804d6681 306 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 210 1.2E-80 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS13845 2e220888b398d17239c87743804d6681 306 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 293 2.4E-111 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS13845 2e220888b398d17239c87743804d6681 306 PANTHER PTHR11557:SF0 4 306 1.1E-161 T 22-04-2016 SCD_RS13845 2e220888b398d17239c87743804d6681 306 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 38.869 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS13845 2e220888b398d17239c87743804d6681 306 Gene3D G3DSA:3.30.160.40 219 303 4.1E-26 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS13845 2e220888b398d17239c87743804d6681 306 SUPERFAMILY SSF54782 218 304 9.42E-26 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS13845 2e220888b398d17239c87743804d6681 306 Gene3D G3DSA:3.40.190.10 109 197 2.4E-41 T 22-04-2016 SCD_RS13845 2e220888b398d17239c87743804d6681 306 PIRSF PIRSF001438 1 306 1.0E-121 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS13845 2e220888b398d17239c87743804d6681 306 Gene3D G3DSA:3.40.190.10 3 108 1.3E-47 T 22-04-2016 SCD_RS05070 20f3d17d9da50a4f90875e8d410ffe48 448 PANTHER PTHR11271 4 439 9.5E-184 T 22-04-2016 SCD_RS05070 20f3d17d9da50a4f90875e8d410ffe48 448 Gene3D G3DSA:2.30.40.10 373 415 6.6E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SCD_RS05070 20f3d17d9da50a4f90875e8d410ffe48 448 Gene3D G3DSA:2.30.40.10 8 67 6.6E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SCD_RS05070 20f3d17d9da50a4f90875e8d410ffe48 448 Pfam PF01979 Amidohydrolase family 62 412 6.5E-73 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SCD_RS05070 20f3d17d9da50a4f90875e8d410ffe48 448 Gene3D G3DSA:3.20.20.140 68 372 1.3E-102 T 22-04-2016 SCD_RS05070 20f3d17d9da50a4f90875e8d410ffe48 448 PANTHER PTHR11271:SF7 4 439 9.5E-184 T 22-04-2016 SCD_RS05070 20f3d17d9da50a4f90875e8d410ffe48 448 SUPERFAMILY SSF51338 7 65 1.76E-27 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SCD_RS05070 20f3d17d9da50a4f90875e8d410ffe48 448 SUPERFAMILY SSF51338 363 437 1.76E-27 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SCD_RS05070 20f3d17d9da50a4f90875e8d410ffe48 448 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 7 438 41.065 T 22-04-2016 IPR023512 Deaminase MtaD/DadD GO:0019239 SCD_RS05070 20f3d17d9da50a4f90875e8d410ffe48 448 SUPERFAMILY SSF51556 65 364 1.02E-100 T 22-04-2016 IPR032466 Metal-dependent hydrolase SCD_RS13760 be160bd3883364eaac34a02cb4ed9eb8 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 125 28.816 T 22-04-2016 IPR002930 Glycine cleavage system H-protein SCD_RS13760 be160bd3883364eaac34a02cb4ed9eb8 129 Gene3D G3DSA:2.40.50.100 6 127 4.0E-47 T 22-04-2016 SCD_RS13760 be160bd3883364eaac34a02cb4ed9eb8 129 Pfam PF01597 Glycine cleavage H-protein 7 126 5.5E-43 T 22-04-2016 IPR002930 Glycine cleavage system H-protein SCD_RS13760 be160bd3883364eaac34a02cb4ed9eb8 129 PANTHER PTHR11715:SF12 1 127 2.4E-60 T 22-04-2016 SCD_RS13760 be160bd3883364eaac34a02cb4ed9eb8 129 PANTHER PTHR11715 1 127 2.4E-60 T 22-04-2016 IPR002930 Glycine cleavage system H-protein SCD_RS13760 be160bd3883364eaac34a02cb4ed9eb8 129 SUPERFAMILY SSF51230 3 126 3.22E-40 T 22-04-2016 IPR011053 Single hybrid motif SCD_RS13760 be160bd3883364eaac34a02cb4ed9eb8 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 48 77 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SCD_RS13760 be160bd3883364eaac34a02cb4ed9eb8 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 127 8.7E-46 T 22-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 SCD_RS06140 fba46b5fbe1abab15cad5c5ca04d8db3 264 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 255 5.2E-74 T 22-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 SCD_RS06140 fba46b5fbe1abab15cad5c5ca04d8db3 264 PANTHER PTHR30065:SF1 2 262 2.9E-87 T 22-04-2016 SCD_RS06140 fba46b5fbe1abab15cad5c5ca04d8db3 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 1.5E-29 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SCD_RS06140 fba46b5fbe1abab15cad5c5ca04d8db3 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 1.5E-29 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SCD_RS06140 fba46b5fbe1abab15cad5c5ca04d8db3 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 1.5E-29 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SCD_RS06140 fba46b5fbe1abab15cad5c5ca04d8db3 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 1.5E-29 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SCD_RS06140 fba46b5fbe1abab15cad5c5ca04d8db3 264 Pfam PF01311 Bacterial export proteins, family 1 14 246 3.9E-74 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SCD_RS06140 fba46b5fbe1abab15cad5c5ca04d8db3 264 PANTHER PTHR30065 2 262 2.9E-87 T 22-04-2016 SCD_RS06095 74571831c2b5428af00da985b452a175 466 Gene3D G3DSA:3.40.50.300 120 385 2.9E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06095 74571831c2b5428af00da985b452a175 466 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 17 464 1.0E-171 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS06095 74571831c2b5428af00da985b452a175 466 PANTHER PTHR15184 5 93 7.9E-219 T 22-04-2016 SCD_RS06095 74571831c2b5428af00da985b452a175 466 PANTHER PTHR15184 115 464 7.9E-219 T 22-04-2016 SCD_RS06095 74571831c2b5428af00da985b452a175 466 SMART SM00382 185 368 3.5E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS06095 74571831c2b5428af00da985b452a175 466 PANTHER PTHR15184:SF9 5 93 7.9E-219 T 22-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS06095 74571831c2b5428af00da985b452a175 466 PANTHER PTHR15184:SF9 115 464 7.9E-219 T 22-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS06095 74571831c2b5428af00da985b452a175 466 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 173 384 7.5E-73 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS06095 74571831c2b5428af00da985b452a175 466 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 375 384 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS06095 74571831c2b5428af00da985b452a175 466 SUPERFAMILY SSF52540 120 387 1.88E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06095 74571831c2b5428af00da985b452a175 466 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 462 4.4E-195 T 22-04-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS03290 c4a7109493c2127179c4a70aa736f6e6 83 PANTHER PTHR34404 2 67 3.8E-19 T 22-04-2016 SCD_RS03290 c4a7109493c2127179c4a70aa736f6e6 83 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 1.4E-22 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain SCD_RS03290 c4a7109493c2127179c4a70aa736f6e6 83 Pfam PF09723 Zinc ribbon domain 1 40 4.7E-15 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain SCD_RS03290 c4a7109493c2127179c4a70aa736f6e6 83 SMART SM00834 1 42 2.3E-18 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain SCD_RS03290 c4a7109493c2127179c4a70aa736f6e6 83 PANTHER PTHR34404:SF2 2 67 3.8E-19 T 22-04-2016 SCD_RS00475 b20e9e5f8bc9a940799e8ba556399a9a 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 1.9E-26 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SCD_RS00475 b20e9e5f8bc9a940799e8ba556399a9a 95 PANTHER PTHR15004 1 95 5.9E-23 T 22-04-2016 SCD_RS00475 b20e9e5f8bc9a940799e8ba556399a9a 95 SUPERFAMILY SSF141000 3 93 1.23E-26 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SCD_RS00475 b20e9e5f8bc9a940799e8ba556399a9a 95 PANTHER PTHR15004:SF0 1 95 5.9E-23 T 22-04-2016 SCD_RS00475 b20e9e5f8bc9a940799e8ba556399a9a 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 21.435 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SCD_RS00475 b20e9e5f8bc9a940799e8ba556399a9a 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 90 8.9E-17 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SCD_RS14800 8eeabbb44e9adce828c8fb07ab419a1f 691 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 579 681 1.0E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS14800 8eeabbb44e9adce828c8fb07ab419a1f 691 PANTHER PTHR24423 457 685 2.6E-34 T 22-04-2016 SCD_RS14800 8eeabbb44e9adce828c8fb07ab419a1f 691 SUPERFAMILY SSF55874 549 680 2.88E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS14800 8eeabbb44e9adce828c8fb07ab419a1f 691 TIGRFAM TIGR02916 PEP_his_kin: putative PEP-CTERM system histidine kinase 9 679 6.4E-273 T 22-04-2016 IPR014265 Signal transduction histidine kinase, PEP-CTERM system, putative SCD_RS14800 8eeabbb44e9adce828c8fb07ab419a1f 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 642 660 8.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS14800 8eeabbb44e9adce828c8fb07ab419a1f 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 666 679 8.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS14800 8eeabbb44e9adce828c8fb07ab419a1f 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 641 8.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS14800 8eeabbb44e9adce828c8fb07ab419a1f 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 612 626 8.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS14800 8eeabbb44e9adce828c8fb07ab419a1f 691 Gene3D G3DSA:3.30.565.10 525 684 8.8E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS14800 8eeabbb44e9adce828c8fb07ab419a1f 691 SUPERFAMILY SSF55781 324 465 3.19E-10 T 22-04-2016 IPR029016 GAF domain-like SCD_RS14800 8eeabbb44e9adce828c8fb07ab419a1f 691 SMART SM00387 575 682 8.3E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS12490 ae83998575cc7b34b5d1d34492e7abfa 84 PANTHER PTHR38039 1 84 1.4E-29 T 22-04-2016 SCD_RS12490 ae83998575cc7b34b5d1d34492e7abfa 84 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 84 3.6E-33 T 22-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 SCD_RS12490 ae83998575cc7b34b5d1d34492e7abfa 84 PANTHER PTHR38039:SF1 1 84 1.4E-29 T 22-04-2016 SCD_RS12490 ae83998575cc7b34b5d1d34492e7abfa 84 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 84 2.3E-37 T 22-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 SCD_RS12490 ae83998575cc7b34b5d1d34492e7abfa 84 SUPERFAMILY SSF143011 1 83 4.45E-27 T 22-04-2016 SCD_RS09355 f450ca23ba8ae78cffa8475a7eceb97e 251 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 244 1.3E-91 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SCD_RS09355 f450ca23ba8ae78cffa8475a7eceb97e 251 Gene3D G3DSA:3.90.550.10 1 250 3.5E-85 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS09355 f450ca23ba8ae78cffa8475a7eceb97e 251 PANTHER PTHR21485 1 250 1.2E-113 T 22-04-2016 SCD_RS09355 f450ca23ba8ae78cffa8475a7eceb97e 251 PANTHER PTHR21485:SF4 1 250 1.2E-113 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SCD_RS09355 f450ca23ba8ae78cffa8475a7eceb97e 251 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 251 44.318 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SCD_RS09355 f450ca23ba8ae78cffa8475a7eceb97e 251 SUPERFAMILY SSF53448 3 250 1.04E-64 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS09355 f450ca23ba8ae78cffa8475a7eceb97e 251 Pfam PF02348 Cytidylyltransferase 5 224 9.4E-60 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SCD_RS08875 7668979dd10cac1d9116e820dbb47b22 245 Pfam PF00588 SpoU rRNA Methylase family 96 236 1.7E-40 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SCD_RS08875 7668979dd10cac1d9116e820dbb47b22 245 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 4.3E-21 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SCD_RS08875 7668979dd10cac1d9116e820dbb47b22 245 Gene3D G3DSA:3.40.1280.10 90 243 4.6E-56 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SCD_RS08875 7668979dd10cac1d9116e820dbb47b22 245 PANTHER PTHR12029 5 244 4.4E-73 T 22-04-2016 SCD_RS08875 7668979dd10cac1d9116e820dbb47b22 245 SMART SM00967 5 81 1.5E-18 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SCD_RS08875 7668979dd10cac1d9116e820dbb47b22 245 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 243 43.445 T 22-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB SCD_RS08875 7668979dd10cac1d9116e820dbb47b22 245 Gene3D G3DSA:3.30.1330.30 2 75 5.5E-24 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SCD_RS08875 7668979dd10cac1d9116e820dbb47b22 245 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 242 6.4E-76 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 SCD_RS08875 7668979dd10cac1d9116e820dbb47b22 245 SUPERFAMILY SSF75217 75 243 5.1E-50 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SCD_RS08875 7668979dd10cac1d9116e820dbb47b22 245 SUPERFAMILY SSF55315 4 75 1.09E-19 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SCD_RS10390 2a87d05549aea34f15448f4ba80d836a 829 PIRSF PIRSF000460 7 828 2.4E-242 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SCD_RS10390 2a87d05549aea34f15448f4ba80d836a 829 Gene3D G3DSA:3.40.50.2000 491 806 1.9E-140 T 22-04-2016 SCD_RS10390 2a87d05549aea34f15448f4ba80d836a 829 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 23 821 0.0 T 22-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SCD_RS10390 2a87d05549aea34f15448f4ba80d836a 829 PANTHER PTHR11468 25 827 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SCD_RS10390 2a87d05549aea34f15448f4ba80d836a 829 Pfam PF00343 Carbohydrate phosphorylase 110 821 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SCD_RS10390 2a87d05549aea34f15448f4ba80d836a 829 Gene3D G3DSA:3.40.50.2000 22 490 2.5E-220 T 22-04-2016 SCD_RS10390 2a87d05549aea34f15448f4ba80d836a 829 SUPERFAMILY SSF53756 18 823 0.0 T 22-04-2016 SCD_RS10390 2a87d05549aea34f15448f4ba80d836a 829 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 665 677 - T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SCD_RS08460 da18c3c94d7006683dcc641677ec6e2f 252 PANTHER PTHR18901:SF21 2 252 3.1E-71 T 22-04-2016 SCD_RS08460 da18c3c94d7006683dcc641677ec6e2f 252 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 199 2.8E-20 T 22-04-2016 IPR023214 HAD-like domain SCD_RS08460 da18c3c94d7006683dcc641677ec6e2f 252 Gene3D G3DSA:3.40.50.1000 3 204 2.3E-31 T 22-04-2016 IPR023214 HAD-like domain SCD_RS08460 da18c3c94d7006683dcc641677ec6e2f 252 PANTHER PTHR18901 2 252 3.1E-71 T 22-04-2016 SCD_RS08460 da18c3c94d7006683dcc641677ec6e2f 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 162 182 1.8E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SCD_RS08460 da18c3c94d7006683dcc641677ec6e2f 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 1.8E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SCD_RS08460 da18c3c94d7006683dcc641677ec6e2f 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 110 123 1.8E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SCD_RS08460 da18c3c94d7006683dcc641677ec6e2f 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 144 160 1.8E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SCD_RS08460 da18c3c94d7006683dcc641677ec6e2f 252 SUPERFAMILY SSF56784 3 220 3.94E-39 T 22-04-2016 IPR023214 HAD-like domain SCD_RS08460 da18c3c94d7006683dcc641677ec6e2f 252 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 153 199 1.4E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SCD_RS10325 a923f345aa558508e09e51e1c5dce7ab 375 PANTHER PTHR23409 34 370 4.2E-151 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SCD_RS10325 a923f345aa558508e09e51e1c5dce7ab 375 Gene3D G3DSA:1.10.620.20 41 349 8.4E-109 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 SCD_RS10325 a923f345aa558508e09e51e1c5dce7ab 375 PANTHER PTHR23409:SF18 34 370 4.2E-151 T 22-04-2016 SCD_RS10325 a923f345aa558508e09e51e1c5dce7ab 375 PIRSF PIRSF000355 28 375 7.3E-136 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SCD_RS10325 a923f345aa558508e09e51e1c5dce7ab 375 SUPERFAMILY SSF47240 37 346 4.06E-95 T 22-04-2016 IPR009078 Ferritin-like superfamily SCD_RS10325 a923f345aa558508e09e51e1c5dce7ab 375 Pfam PF00268 Ribonucleotide reductase, small chain 55 342 2.4E-80 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SCD_RS11635 58e0da7ba2059df7000b1bd9133948cf 223 Gene3D G3DSA:3.40.50.300 1 151 9.8E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11635 58e0da7ba2059df7000b1bd9133948cf 223 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 3 220 9.4E-74 T 22-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 SCD_RS11635 58e0da7ba2059df7000b1bd9133948cf 223 PANTHER PTHR30050:SF5 1 223 1.9E-52 T 22-04-2016 SCD_RS11635 58e0da7ba2059df7000b1bd9133948cf 223 SUPERFAMILY SSF52540 14 200 2.04E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11635 58e0da7ba2059df7000b1bd9133948cf 223 Gene3D G3DSA:1.10.8.60 155 220 1.3E-26 T 22-04-2016 SCD_RS11635 58e0da7ba2059df7000b1bd9133948cf 223 PANTHER PTHR30050 1 223 1.9E-52 T 22-04-2016 SCD_RS11635 58e0da7ba2059df7000b1bd9133948cf 223 Pfam PF00308 Bacterial dnaA protein 83 202 7.3E-8 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA SCD_RS10995 a0346920791181c5295cd0a9273726d3 252 Pfam PF00005 ABC transporter 18 164 4.9E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS10995 a0346920791181c5295cd0a9273726d3 252 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS10995 a0346920791181c5295cd0a9273726d3 252 PANTHER PTHR24220 3 235 6.8E-64 T 22-04-2016 SCD_RS10995 a0346920791181c5295cd0a9273726d3 252 SUPERFAMILY SSF52540 2 226 3.69E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS10995 a0346920791181c5295cd0a9273726d3 252 Gene3D G3DSA:3.40.50.300 1 231 1.6E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS10995 a0346920791181c5295cd0a9273726d3 252 SMART SM00382 26 223 4.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS09580 0b4712e28824f54f33bc1eff329af0a7 182 PANTHER PTHR11046:SF1 2 182 4.9E-100 T 22-04-2016 SCD_RS09580 0b4712e28824f54f33bc1eff329af0a7 182 SMART SM00479 7 180 1.6E-27 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SCD_RS09580 0b4712e28824f54f33bc1eff329af0a7 182 SUPERFAMILY SSF53098 2 180 2.73E-46 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS09580 0b4712e28824f54f33bc1eff329af0a7 182 PANTHER PTHR11046 2 182 4.9E-100 T 22-04-2016 SCD_RS09580 0b4712e28824f54f33bc1eff329af0a7 182 Gene3D G3DSA:3.30.420.10 5 179 6.5E-71 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS09580 0b4712e28824f54f33bc1eff329af0a7 182 Pfam PF00929 Exonuclease 9 168 1.3E-31 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SCD_RS09580 0b4712e28824f54f33bc1eff329af0a7 182 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 42.159 T 22-04-2016 IPR022894 Oligoribonuclease GO:0016788 SCD_RS04710 3b622eb0e51527320e4651447ce2a933 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 140 3.5E-46 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 SCD_RS04710 3b622eb0e51527320e4651447ce2a933 162 Pfam PF12838 4Fe-4S dicluster domain 62 116 1.0E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS04710 3b622eb0e51527320e4651447ce2a933 162 Gene3D G3DSA:1.10.1060.10 14 129 7.3E-24 T 22-04-2016 SCD_RS04710 3b622eb0e51527320e4651447ce2a933 162 SUPERFAMILY SSF54862 36 144 1.09E-25 T 22-04-2016 SCD_RS04710 3b622eb0e51527320e4651447ce2a933 162 PANTHER PTHR10849:SF20 4 162 4.9E-85 T 22-04-2016 SCD_RS04710 3b622eb0e51527320e4651447ce2a933 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS04710 3b622eb0e51527320e4651447ce2a933 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS04710 3b622eb0e51527320e4651447ce2a933 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 159 28.254 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 SCD_RS04710 3b622eb0e51527320e4651447ce2a933 162 PANTHER PTHR10849 4 162 4.9E-85 T 22-04-2016 SCD_RS09400 f43d6a36a91c8cabe39a09d3b8d9e41f 584 SMART SM00853 397 540 1.6E-53 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 SCD_RS09400 f43d6a36a91c8cabe39a09d3b8d9e41f 584 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 306 3.5E-89 T 22-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 SCD_RS09400 f43d6a36a91c8cabe39a09d3b8d9e41f 584 SUPERFAMILY SSF55874 4 201 1.17E-51 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS09400 f43d6a36a91c8cabe39a09d3b8d9e41f 584 Gene3D G3DSA:3.30.565.10 3 196 1.5E-67 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS09400 f43d6a36a91c8cabe39a09d3b8d9e41f 584 Pfam PF08676 MutL C terminal dimerisation domain 393 540 2.0E-47 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 SCD_RS09400 f43d6a36a91c8cabe39a09d3b8d9e41f 584 PANTHER PTHR10073 4 580 4.1E-145 T 22-04-2016 SCD_RS09400 f43d6a36a91c8cabe39a09d3b8d9e41f 584 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 125 1.5E-11 T 22-04-2016 SCD_RS09400 f43d6a36a91c8cabe39a09d3b8d9e41f 584 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 209 325 3.5E-38 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 SCD_RS09400 f43d6a36a91c8cabe39a09d3b8d9e41f 584 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 22-04-2016 IPR014762 DNA mismatch repair, conserved site SCD_RS09400 f43d6a36a91c8cabe39a09d3b8d9e41f 584 SUPERFAMILY SSF54211 191 326 4.55E-37 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SCD_RS09400 f43d6a36a91c8cabe39a09d3b8d9e41f 584 SMART SM01340 208 326 3.5E-58 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 SCD_RS09400 f43d6a36a91c8cabe39a09d3b8d9e41f 584 SUPERFAMILY SSF118116 393 582 1.7E-56 T 22-04-2016 SCD_RS09400 f43d6a36a91c8cabe39a09d3b8d9e41f 584 Gene3D G3DSA:3.30.230.10 197 325 2.5E-37 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SCD_RS09400 f43d6a36a91c8cabe39a09d3b8d9e41f 584 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 580 27.754 T 22-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 SCD_RS11610 c08056ac158601caacebbf320c94421c 314 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 289 313 1.2E-5 T 22-04-2016 IPR013424 PEP-CTERM protein-sorting domain SCD_RS11610 c08056ac158601caacebbf320c94421c 314 Pfam PF07589 PEP-CTERM motif 288 311 4.3E-6 T 22-04-2016 IPR013424 PEP-CTERM protein-sorting domain SCD_RS11610 c08056ac158601caacebbf320c94421c 314 SUPERFAMILY SSF63825 35 92 1.18E-5 T 22-04-2016 SCD_RS11610 c08056ac158601caacebbf320c94421c 314 SUPERFAMILY SSF63825 144 233 1.18E-5 T 22-04-2016 SCD_RS14530 d5a22a16880839e0eb1fba0746b5c0b4 208 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 191 1.6E-71 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 SCD_RS14530 d5a22a16880839e0eb1fba0746b5c0b4 208 Gene3D G3DSA:3.40.50.300 8 195 8.5E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14530 d5a22a16880839e0eb1fba0746b5c0b4 208 SUPERFAMILY SSF52540 21 195 4.83E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14530 d5a22a16880839e0eb1fba0746b5c0b4 208 Pfam PF01926 50S ribosome-binding GTPase 26 144 1.4E-16 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS14530 d5a22a16880839e0eb1fba0746b5c0b4 208 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 12 195 26.943 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 SCD_RS14530 d5a22a16880839e0eb1fba0746b5c0b4 208 PANTHER PTHR11649 1 195 1.2E-46 T 22-04-2016 SCD_RS13930 5574c7ce3372d7200066c448147f7e31 136 SUPERFAMILY SSF54523 19 116 1.96E-21 T 22-04-2016 SCD_RS13930 5574c7ce3372d7200066c448147f7e31 136 Pfam PF08334 Type II secretion system (T2SS), protein G 42 86 3.0E-5 T 22-04-2016 IPR013545 Type II secretion system protein G SCD_RS13930 5574c7ce3372d7200066c448147f7e31 136 Pfam PF13633 Prokaryotic N-terminal methylation site 17 40 3.1E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS13930 5574c7ce3372d7200066c448147f7e31 136 PANTHER PTHR30093 18 111 7.8E-28 T 22-04-2016 SCD_RS13930 5574c7ce3372d7200066c448147f7e31 136 PRINTS PR00813 Bacterial general secretion pathway protein G signature 18 43 1.2E-9 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SCD_RS13930 5574c7ce3372d7200066c448147f7e31 136 PRINTS PR00813 Bacterial general secretion pathway protein G signature 54 72 1.2E-9 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SCD_RS13930 5574c7ce3372d7200066c448147f7e31 136 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 39 3.1E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS13930 5574c7ce3372d7200066c448147f7e31 136 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS13930 5574c7ce3372d7200066c448147f7e31 136 PANTHER PTHR30093:SF6 18 111 7.8E-28 T 22-04-2016 SCD_RS13930 5574c7ce3372d7200066c448147f7e31 136 Gene3D G3DSA:3.30.700.10 19 85 5.1E-12 T 22-04-2016 SCD_RS03340 f806c9b6982e93e26b74318169ad36bb 351 Gene3D G3DSA:3.40.50.300 30 186 1.5E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03340 f806c9b6982e93e26b74318169ad36bb 351 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 263 336 5.5E-33 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SCD_RS03340 f806c9b6982e93e26b74318169ad36bb 351 PANTHER PTHR13779 3 340 3.5E-185 T 22-04-2016 SCD_RS03340 f806c9b6982e93e26b74318169ad36bb 351 Gene3D G3DSA:1.10.8.60 193 265 3.2E-33 T 22-04-2016 SCD_RS03340 f806c9b6982e93e26b74318169ad36bb 351 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 351 185.306 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SCD_RS03340 f806c9b6982e93e26b74318169ad36bb 351 PANTHER PTHR13779:SF25 3 340 3.5E-185 T 22-04-2016 SCD_RS03340 f806c9b6982e93e26b74318169ad36bb 351 SMART SM00382 61 188 1.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS03340 f806c9b6982e93e26b74318169ad36bb 351 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 34 336 1.6E-149 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SCD_RS03340 f806c9b6982e93e26b74318169ad36bb 351 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 20 245 1.1E-118 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 SCD_RS03340 f806c9b6982e93e26b74318169ad36bb 351 Gene3D G3DSA:1.10.10.10 267 337 2.4E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS03340 f806c9b6982e93e26b74318169ad36bb 351 SUPERFAMILY SSF52540 30 258 2.09E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03340 f806c9b6982e93e26b74318169ad36bb 351 SUPERFAMILY SSF46785 267 340 1.32E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS03340 f806c9b6982e93e26b74318169ad36bb 351 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 260 338 4.0E-33 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SCD_RS01915 31ec0a2414aabbe360fe0dad0851e668 159 Gene3D G3DSA:3.30.1050.10 76 131 3.8E-10 T 22-04-2016 IPR003033 SCP2 sterol-binding domain SCD_RS01915 31ec0a2414aabbe360fe0dad0851e668 159 PANTHER PTHR10094 9 146 3.3E-25 T 22-04-2016 SCD_RS01915 31ec0a2414aabbe360fe0dad0851e668 159 PANTHER PTHR10094:SF16 9 146 3.3E-25 T 22-04-2016 SCD_RS01915 31ec0a2414aabbe360fe0dad0851e668 159 SUPERFAMILY SSF55718 24 133 5.42E-17 T 22-04-2016 IPR003033 SCP2 sterol-binding domain SCD_RS01915 31ec0a2414aabbe360fe0dad0851e668 159 Pfam PF02036 SCP-2 sterol transfer family 41 127 3.1E-13 T 22-04-2016 IPR003033 SCP2 sterol-binding domain SCD_RS12980 a41fa41ffa261744332019de48fcbe27 185 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 32 183 1.7E-29 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 SCD_RS12980 a41fa41ffa261744332019de48fcbe27 185 Pfam PF03550 Outer membrane lipoprotein LolB 32 182 8.4E-46 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 SCD_RS12980 a41fa41ffa261744332019de48fcbe27 185 SUPERFAMILY SSF89392 5 183 5.89E-39 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX SCD_RS12980 a41fa41ffa261744332019de48fcbe27 185 Gene3D G3DSA:2.50.20.10 2 184 1.4E-44 T 22-04-2016 SCD_RS12980 a41fa41ffa261744332019de48fcbe27 185 PANTHER PTHR30634 32 184 7.3E-20 T 22-04-2016 SCD_RS12980 a41fa41ffa261744332019de48fcbe27 185 PANTHER PTHR30634:SF11 32 184 7.3E-20 T 22-04-2016 SCD_RS10145 26bc289ad9ace51a0ba9b170a080ff65 393 PANTHER PTHR32089 38 393 3.2E-114 T 22-04-2016 SCD_RS10145 26bc289ad9ace51a0ba9b170a080ff65 393 SUPERFAMILY SSF58104 83 392 4.58E-78 T 22-04-2016 SCD_RS10145 26bc289ad9ace51a0ba9b170a080ff65 393 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 176 390 6.3E-54 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SCD_RS10145 26bc289ad9ace51a0ba9b170a080ff65 393 SMART SM00304 63 115 3.7E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS10145 26bc289ad9ace51a0ba9b170a080ff65 393 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 228 255 7.7E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SCD_RS10145 26bc289ad9ace51a0ba9b170a080ff65 393 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 257 286 7.7E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SCD_RS10145 26bc289ad9ace51a0ba9b170a080ff65 393 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 151 180 7.7E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SCD_RS10145 26bc289ad9ace51a0ba9b170a080ff65 393 Gene3D G3DSA:1.10.287.950 145 360 1.2E-59 T 22-04-2016 SCD_RS10145 26bc289ad9ace51a0ba9b170a080ff65 393 Pfam PF00672 HAMP domain 43 112 1.7E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS10145 26bc289ad9ace51a0ba9b170a080ff65 393 SMART SM00283 130 391 9.2E-80 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SCD_RS11295 ccca667cc77d74b28ce057885601bc52 380 PANTHER PTHR40252:SF1 1 380 3.2E-95 T 22-04-2016 SCD_RS11295 ccca667cc77d74b28ce057885601bc52 380 Pfam PF08495 FIST N domain 30 218 1.3E-34 T 22-04-2016 IPR013702 FIST domain, N-terminal SCD_RS11295 ccca667cc77d74b28ce057885601bc52 380 Pfam PF10442 FIST C domain 220 358 3.2E-28 T 22-04-2016 IPR019494 FIST, C-domain SCD_RS11295 ccca667cc77d74b28ce057885601bc52 380 SMART SM01204 220 359 4.9E-40 T 22-04-2016 IPR019494 FIST, C-domain SCD_RS11295 ccca667cc77d74b28ce057885601bc52 380 SMART SM00897 26 219 4.7E-42 T 22-04-2016 IPR013702 FIST domain, N-terminal SCD_RS11295 ccca667cc77d74b28ce057885601bc52 380 PANTHER PTHR40252 1 380 3.2E-95 T 22-04-2016 SCD_RS01580 c80ec5221ce35d113a55f8de144f25af 178 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 176 3.1E-83 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SCD_RS01580 c80ec5221ce35d113a55f8de144f25af 178 PANTHER PTHR32194 1 178 2.4E-121 T 22-04-2016 SCD_RS01580 c80ec5221ce35d113a55f8de144f25af 178 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 177 40.466 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SCD_RS01580 c80ec5221ce35d113a55f8de144f25af 178 PIRSF PIRSF039093 1 178 2.7E-85 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SCD_RS01580 c80ec5221ce35d113a55f8de144f25af 178 SUPERFAMILY SSF56235 3 177 2.65E-59 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SCD_RS01580 c80ec5221ce35d113a55f8de144f25af 178 Gene3D G3DSA:3.60.20.10 7 178 8.1E-84 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SCD_RS01580 c80ec5221ce35d113a55f8de144f25af 178 Pfam PF00227 Proteasome subunit 5 176 1.2E-23 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 SCD_RS00495 0170ade75fc690d6e1fac6409e3c28eb 634 Gene3D G3DSA:3.40.710.10 253 614 2.6E-111 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS00495 0170ade75fc690d6e1fac6409e3c28eb 634 PANTHER PTHR30627 5 621 2.1E-229 T 22-04-2016 SCD_RS00495 0170ade75fc690d6e1fac6409e3c28eb 634 SUPERFAMILY SSF56601 254 614 1.37E-103 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS00495 0170ade75fc690d6e1fac6409e3c28eb 634 Pfam PF00905 Penicillin binding protein transpeptidase domain 271 610 2.2E-70 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SCD_RS00495 0170ade75fc690d6e1fac6409e3c28eb 634 SUPERFAMILY SSF56519 56 253 1.83E-48 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SCD_RS00495 0170ade75fc690d6e1fac6409e3c28eb 634 PANTHER PTHR30627:SF2 5 621 2.1E-229 T 22-04-2016 SCD_RS00495 0170ade75fc690d6e1fac6409e3c28eb 634 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 239 3.2E-40 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SCD_RS00495 0170ade75fc690d6e1fac6409e3c28eb 634 Gene3D G3DSA:3.90.1310.10 130 252 8.2E-35 T 22-04-2016 SCD_RS00495 0170ade75fc690d6e1fac6409e3c28eb 634 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 614 2.7E-237 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 SCD_RS04450 150ce07a533cb0ff902cf60f3a16fe6d 216 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 38 53 2.5E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SCD_RS04450 150ce07a533cb0ff902cf60f3a16fe6d 216 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 141 156 2.5E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SCD_RS04450 150ce07a533cb0ff902cf60f3a16fe6d 216 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 2.5E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SCD_RS04450 150ce07a533cb0ff902cf60f3a16fe6d 216 SUPERFAMILY SSF50891 21 184 2.19E-53 T 22-04-2016 IPR029000 Cyclophilin-like domain SCD_RS04450 150ce07a533cb0ff902cf60f3a16fe6d 216 Gene3D G3DSA:2.40.100.10 9 189 3.0E-50 T 22-04-2016 IPR029000 Cyclophilin-like domain SCD_RS04450 150ce07a533cb0ff902cf60f3a16fe6d 216 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 25 184 1.1E-43 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SCD_RS04450 150ce07a533cb0ff902cf60f3a16fe6d 216 PANTHER PTHR11071 7 186 2.6E-57 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SCD_RS04450 150ce07a533cb0ff902cf60f3a16fe6d 216 PANTHER PTHR11071:SF192 7 186 2.6E-57 T 22-04-2016 SCD_RS10535 c9a687165865013dde12ed6102745d0c 311 Pfam PF02401 LytB protein 3 279 8.8E-94 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 SCD_RS10535 c9a687165865013dde12ed6102745d0c 311 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3 281 2.9E-101 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 SCD_RS10535 c9a687165865013dde12ed6102745d0c 311 PANTHER PTHR30426 1 305 1.1E-158 T 22-04-2016 SCD_RS10535 c9a687165865013dde12ed6102745d0c 311 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 283 38.674 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 SCD_RS09295 0cdb45d493d035866ad7701d94e312b4 322 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 99 187 1.1E-26 T 22-04-2016 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein SCD_RS05645 bfd4d819369cf2a58106fdd1cd766ac8 393 Gene3D G3DSA:3.90.1150.10 269 375 5.8E-37 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS05645 bfd4d819369cf2a58106fdd1cd766ac8 393 Pfam PF00266 Aminotransferase class-V 13 338 2.8E-37 T 22-04-2016 IPR000192 Aminotransferase class V domain SCD_RS05645 bfd4d819369cf2a58106fdd1cd766ac8 393 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SCD_RS05645 bfd4d819369cf2a58106fdd1cd766ac8 393 SUPERFAMILY SSF53383 9 374 9.76E-104 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS05645 bfd4d819369cf2a58106fdd1cd766ac8 393 Gene3D G3DSA:3.40.640.10 22 268 1.3E-60 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS05645 bfd4d819369cf2a58106fdd1cd766ac8 393 PIRSF PIRSF000524 4 393 6.2E-115 T 22-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 SCD_RS05645 bfd4d819369cf2a58106fdd1cd766ac8 393 PANTHER PTHR21152 1 391 1.3E-123 T 22-04-2016 SCD_RS13555 478ef8697588ecc5dd5d1eef87abef72 205 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS13555 478ef8697588ecc5dd5d1eef87abef72 205 SMART SM00382 26 203 3.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS13555 478ef8697588ecc5dd5d1eef87abef72 205 Gene3D G3DSA:3.40.50.300 1 195 8.8E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13555 478ef8697588ecc5dd5d1eef87abef72 205 Pfam PF00005 ABC transporter 18 158 1.3E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS13555 478ef8697588ecc5dd5d1eef87abef72 205 PANTHER PTHR24220 3 193 6.2E-79 T 22-04-2016 SCD_RS13555 478ef8697588ecc5dd5d1eef87abef72 205 PANTHER PTHR24220:SF508 3 193 6.2E-79 T 22-04-2016 SCD_RS13555 478ef8697588ecc5dd5d1eef87abef72 205 SUPERFAMILY SSF52540 2 197 6.09E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13555 478ef8697588ecc5dd5d1eef87abef72 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 192 6.5E-67 T 22-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 SCD_RS10480 ba2195dc9ce59e52b466e9a45438b368 571 Gene3D G3DSA:3.30.930.10 387 469 5.9E-105 T 22-04-2016 SCD_RS10480 ba2195dc9ce59e52b466e9a45438b368 571 Gene3D G3DSA:3.30.930.10 10 234 5.9E-105 T 22-04-2016 SCD_RS10480 ba2195dc9ce59e52b466e9a45438b368 571 PANTHER PTHR11451:SF3 4 244 6.8E-151 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SCD_RS10480 ba2195dc9ce59e52b466e9a45438b368 571 PANTHER PTHR11451:SF3 397 568 6.8E-151 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SCD_RS10480 ba2195dc9ce59e52b466e9a45438b368 571 SUPERFAMILY SSF55681 405 476 3.45E-104 T 22-04-2016 SCD_RS10480 ba2195dc9ce59e52b466e9a45438b368 571 SUPERFAMILY SSF55681 10 237 3.45E-104 T 22-04-2016 SCD_RS10480 ba2195dc9ce59e52b466e9a45438b368 571 Gene3D G3DSA:3.40.50.800 470 567 3.0E-30 T 22-04-2016 IPR004154 Anticodon-binding SCD_RS10480 ba2195dc9ce59e52b466e9a45438b368 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.5E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SCD_RS10480 ba2195dc9ce59e52b466e9a45438b368 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.5E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SCD_RS10480 ba2195dc9ce59e52b466e9a45438b368 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.5E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SCD_RS10480 ba2195dc9ce59e52b466e9a45438b368 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.5E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SCD_RS10480 ba2195dc9ce59e52b466e9a45438b368 571 Pfam PF03129 Anticodon binding domain 473 565 6.5E-17 T 22-04-2016 IPR004154 Anticodon-binding SCD_RS10480 ba2195dc9ce59e52b466e9a45438b368 571 SUPERFAMILY SSF55826 218 387 4.19E-32 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SCD_RS10480 ba2195dc9ce59e52b466e9a45438b368 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 456 3.6E-46 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS10480 ba2195dc9ce59e52b466e9a45438b368 571 SUPERFAMILY SSF52954 461 567 3.93E-29 T 22-04-2016 IPR004154 Anticodon-binding SCD_RS10480 ba2195dc9ce59e52b466e9a45438b368 571 PANTHER PTHR11451 4 244 6.8E-151 T 22-04-2016 SCD_RS10480 ba2195dc9ce59e52b466e9a45438b368 571 PANTHER PTHR11451 397 568 6.8E-151 T 22-04-2016 SCD_RS10480 ba2195dc9ce59e52b466e9a45438b368 571 PIRSF PIRSF001535 1 570 6.0E-271 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SCD_RS10480 ba2195dc9ce59e52b466e9a45438b368 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 374 1.7E-27 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SCD_RS10480 ba2195dc9ce59e52b466e9a45438b368 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 565 7.7E-237 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SCD_RS10480 ba2195dc9ce59e52b466e9a45438b368 571 Gene3D G3DSA:3.90.960.10 254 385 8.2E-32 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SCD_RS10480 ba2195dc9ce59e52b466e9a45438b368 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 569 41.777 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SCD_RS09690 cf7445186669a63b71c257c3190108da 901 SUPERFAMILY SSF81593 771 894 4.24E-29 T 22-04-2016 SCD_RS09690 cf7445186669a63b71c257c3190108da 901 Pfam PF08335 GlnD PII-uridylyltransferase 795 873 6.7E-9 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 SCD_RS09690 cf7445186669a63b71c257c3190108da 901 Pfam PF08335 GlnD PII-uridylyltransferase 275 412 1.0E-46 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 SCD_RS09690 cf7445186669a63b71c257c3190108da 901 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 8 899 19.203 T 22-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 SCD_RS09690 cf7445186669a63b71c257c3190108da 901 SUPERFAMILY SSF81593 263 412 8.63E-44 T 22-04-2016 SCD_RS09690 cf7445186669a63b71c257c3190108da 901 PANTHER PTHR30621 19 895 4.7E-261 T 22-04-2016 SCD_RS09690 cf7445186669a63b71c257c3190108da 901 SUPERFAMILY SSF81301 11 262 3.98E-71 T 22-04-2016 SCD_RS09690 cf7445186669a63b71c257c3190108da 901 Gene3D G3DSA:3.30.460.10 91 261 2.5E-54 T 22-04-2016 SCD_RS09690 cf7445186669a63b71c257c3190108da 901 Gene3D G3DSA:3.30.460.10 611 765 8.5E-51 T 22-04-2016 SCD_RS09690 cf7445186669a63b71c257c3190108da 901 SUPERFAMILY SSF81301 497 769 1.8E-79 T 22-04-2016 SCD_RS09690 cf7445186669a63b71c257c3190108da 901 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 13 246 2.0E-62 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 SCD_RS09690 cf7445186669a63b71c257c3190108da 901 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 525 759 1.2E-70 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 SCD_RS12770 e070146c1e300a4034aa5d5f90aad72e 568 Pfam PF00916 Sulfate permease family 21 388 1.7E-92 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 SCD_RS12770 e070146c1e300a4034aa5d5f90aad72e 568 TIGRFAM TIGR00815 sulP: sulfate permease 18 549 7.0E-128 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 SCD_RS12770 e070146c1e300a4034aa5d5f90aad72e 568 Pfam PF01740 STAS domain 449 550 9.6E-19 T 22-04-2016 IPR002645 STAS domain SCD_RS12770 e070146c1e300a4034aa5d5f90aad72e 568 PANTHER PTHR11814:SF71 1 555 1.7E-178 T 22-04-2016 SCD_RS12770 e070146c1e300a4034aa5d5f90aad72e 568 PANTHER PTHR11814 1 555 1.7E-178 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 SCD_RS12770 e070146c1e300a4034aa5d5f90aad72e 568 SUPERFAMILY SSF52091 447 554 8.04E-18 T 22-04-2016 IPR002645 STAS domain SCD_RS12770 e070146c1e300a4034aa5d5f90aad72e 568 Gene3D G3DSA:3.30.750.24 451 553 6.1E-18 T 22-04-2016 IPR002645 STAS domain SCD_RS14890 ef775a1ccfe10f862355c3ce50c46bbd 475 Gene3D G3DSA:3.50.50.60 243 385 3.5E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS14890 ef775a1ccfe10f862355c3ce50c46bbd 475 SUPERFAMILY SSF46548 2 154 3.14E-42 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SCD_RS14890 ef775a1ccfe10f862355c3ce50c46bbd 475 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 131 2.7E-25 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II SCD_RS14890 ef775a1ccfe10f862355c3ce50c46bbd 475 PRINTS PR00419 Adrenodoxin reductase family signature 284 298 3.2E-25 T 22-04-2016 SCD_RS14890 ef775a1ccfe10f862355c3ce50c46bbd 475 PRINTS PR00419 Adrenodoxin reductase family signature 168 181 3.2E-25 T 22-04-2016 SCD_RS14890 ef775a1ccfe10f862355c3ce50c46bbd 475 PRINTS PR00419 Adrenodoxin reductase family signature 210 220 3.2E-25 T 22-04-2016 SCD_RS14890 ef775a1ccfe10f862355c3ce50c46bbd 475 PRINTS PR00419 Adrenodoxin reductase family signature 145 167 3.2E-25 T 22-04-2016 SCD_RS14890 ef775a1ccfe10f862355c3ce50c46bbd 475 SUPERFAMILY SSF51971 142 398 4.24E-67 T 22-04-2016 SCD_RS14890 ef775a1ccfe10f862355c3ce50c46bbd 475 Gene3D G3DSA:3.50.50.60 145 242 8.1E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS14890 ef775a1ccfe10f862355c3ce50c46bbd 475 Gene3D G3DSA:1.10.1060.10 3 144 6.4E-43 T 22-04-2016 SCD_RS14890 ef775a1ccfe10f862355c3ce50c46bbd 475 PANTHER PTHR11938:SF75 7 317 1.8E-146 T 22-04-2016 SCD_RS14890 ef775a1ccfe10f862355c3ce50c46bbd 475 PANTHER PTHR11938:SF75 333 468 1.8E-146 T 22-04-2016 SCD_RS14890 ef775a1ccfe10f862355c3ce50c46bbd 475 SUPERFAMILY SSF51971 368 468 5.18E-9 T 22-04-2016 SCD_RS14890 ef775a1ccfe10f862355c3ce50c46bbd 475 PANTHER PTHR11938 7 317 1.8E-146 T 22-04-2016 SCD_RS14890 ef775a1ccfe10f862355c3ce50c46bbd 475 PANTHER PTHR11938 333 468 1.8E-146 T 22-04-2016 SCD_RS14890 ef775a1ccfe10f862355c3ce50c46bbd 475 Gene3D G3DSA:3.50.50.60 386 471 1.7E-17 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS14890 ef775a1ccfe10f862355c3ce50c46bbd 475 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 474 1.9E-222 T 22-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 SCD_RS14890 ef775a1ccfe10f862355c3ce50c46bbd 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 144 456 1.5E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS04060 752fc7eb4d6622a1189fe238aeed9071 187 Gene3D G3DSA:1.10.1740.10 6 77 8.0E-9 T 22-04-2016 SCD_RS04060 752fc7eb4d6622a1189fe238aeed9071 187 SUPERFAMILY SSF88659 117 180 1.64E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS04060 752fc7eb4d6622a1189fe238aeed9071 187 SUPERFAMILY SSF88946 9 83 3.06E-8 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS04060 752fc7eb4d6622a1189fe238aeed9071 187 Pfam PF08281 Sigma-70, region 4 125 172 1.4E-15 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS04060 752fc7eb4d6622a1189fe238aeed9071 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 172 1.6E-23 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS04060 752fc7eb4d6622a1189fe238aeed9071 187 PANTHER PTHR30173 5 181 4.0E-23 T 22-04-2016 SCD_RS04060 752fc7eb4d6622a1189fe238aeed9071 187 Gene3D G3DSA:1.10.10.10 119 181 6.6E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS04060 752fc7eb4d6622a1189fe238aeed9071 187 Pfam PF04542 Sigma-70 region 2 13 75 9.9E-5 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05950 135ae52cd4b00e4354743fbb8fdde06d 303 Pfam PF00924 Mechanosensitive ion channel 74 274 8.9E-45 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SCD_RS05950 135ae52cd4b00e4354743fbb8fdde06d 303 Gene3D G3DSA:2.30.30.60 132 178 1.6E-13 T 22-04-2016 SCD_RS05950 135ae52cd4b00e4354743fbb8fdde06d 303 SUPERFAMILY SSF82689 180 283 2.48E-24 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SCD_RS05950 135ae52cd4b00e4354743fbb8fdde06d 303 PANTHER PTHR30460:SF0 15 302 7.3E-97 T 22-04-2016 SCD_RS05950 135ae52cd4b00e4354743fbb8fdde06d 303 SUPERFAMILY SSF50182 117 179 2.98E-14 T 22-04-2016 IPR010920 LSM domain SCD_RS05950 135ae52cd4b00e4354743fbb8fdde06d 303 Gene3D G3DSA:3.30.70.100 187 272 9.3E-13 T 22-04-2016 SCD_RS05950 135ae52cd4b00e4354743fbb8fdde06d 303 PANTHER PTHR30460 15 302 7.3E-97 T 22-04-2016 SCD_RS05950 135ae52cd4b00e4354743fbb8fdde06d 303 SUPERFAMILY SSF82861 24 115 3.01E-14 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SCD_RS09750 90f6402dd2b507123ff7347f9339cbe4 491 PANTHER PTHR11780:SF1 7 477 4.0E-166 T 22-04-2016 SCD_RS09750 90f6402dd2b507123ff7347f9339cbe4 491 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 369 380 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS09750 90f6402dd2b507123ff7347f9339cbe4 491 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 408 419 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS09750 90f6402dd2b507123ff7347f9339cbe4 491 Pfam PF10531 SLBB domain 289 337 1.3E-13 T 22-04-2016 IPR019554 Soluble ligand binding domain SCD_RS09750 90f6402dd2b507123ff7347f9339cbe4 491 SUPERFAMILY SSF142019 87 296 8.76E-58 T 22-04-2016 SCD_RS09750 90f6402dd2b507123ff7347f9339cbe4 491 PANTHER PTHR11780 7 477 4.0E-166 T 22-04-2016 SCD_RS09750 90f6402dd2b507123ff7347f9339cbe4 491 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 131 276 1.9E-50 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain SCD_RS09750 90f6402dd2b507123ff7347f9339cbe4 491 Pfam PF13375 RnfC Barrel sandwich hybrid domain 6 106 2.4E-34 T 22-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain SCD_RS09750 90f6402dd2b507123ff7347f9339cbe4 491 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 4 437 1.8E-174 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 SCD_RS09750 90f6402dd2b507123ff7347f9339cbe4 491 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 491 160.874 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 SCD_RS09750 90f6402dd2b507123ff7347f9339cbe4 491 Gene3D G3DSA:1.10.1060.10 316 439 2.3E-13 T 22-04-2016 SCD_RS09750 90f6402dd2b507123ff7347f9339cbe4 491 Gene3D G3DSA:2.40.50.100 20 84 4.8E-4 T 22-04-2016 SCD_RS09750 90f6402dd2b507123ff7347f9339cbe4 491 SUPERFAMILY SSF46548 329 436 1.19E-17 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SCD_RS07215 a712187c8afe9a7ac070c0fcc08cccef 312 Gene3D G3DSA:3.40.50.300 39 199 4.9E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07215 a712187c8afe9a7ac070c0fcc08cccef 312 SUPERFAMILY SSF52540 41 202 6.13E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07215 a712187c8afe9a7ac070c0fcc08cccef 312 Pfam PF06990 Galactose-3-O-sulfotransferase 11 288 5.9E-18 T 22-04-2016 IPR009729 Galactose-3-O-sulfotransferase GO:0001733|GO:0005794|GO:0009247|GO:0016021 SCD_RS07215 a712187c8afe9a7ac070c0fcc08cccef 312 PANTHER PTHR32301 43 271 2.4E-35 T 22-04-2016 SCD_RS14115 f0df4e9701e050fc46600c7cef214be1 517 SMART SM00267 335 507 4.0E-60 T 22-04-2016 IPR000160 GGDEF domain SCD_RS14115 f0df4e9701e050fc46600c7cef214be1 517 Pfam PF00990 Diguanylate cyclase, GGDEF domain 346 501 3.0E-51 T 22-04-2016 IPR000160 GGDEF domain SCD_RS14115 f0df4e9701e050fc46600c7cef214be1 517 PANTHER PTHR10799 302 501 1.2E-39 T 22-04-2016 SCD_RS14115 f0df4e9701e050fc46600c7cef214be1 517 SMART SM01079 70 261 5.1E-11 T 22-04-2016 IPR006189 CHASE domain SCD_RS14115 f0df4e9701e050fc46600c7cef214be1 517 SUPERFAMILY SSF55073 351 502 8.63E-50 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS14115 f0df4e9701e050fc46600c7cef214be1 517 Pfam PF03924 CHASE domain 77 203 1.2E-21 T 22-04-2016 IPR006189 CHASE domain SCD_RS14115 f0df4e9701e050fc46600c7cef214be1 517 PANTHER PTHR10799:SF774 302 501 1.2E-39 T 22-04-2016 SCD_RS14115 f0df4e9701e050fc46600c7cef214be1 517 Gene3D G3DSA:3.30.70.270 347 501 8.8E-57 T 22-04-2016 SCD_RS14115 f0df4e9701e050fc46600c7cef214be1 517 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 345 501 1.1E-44 T 22-04-2016 IPR000160 GGDEF domain SCD_RS04270 75e6a51f1bd5c24313fb120e3120018c 333 Pfam PF13602 Zinc-binding dehydrogenase 189 330 9.7E-35 T 22-04-2016 SCD_RS04270 75e6a51f1bd5c24313fb120e3120018c 333 SUPERFAMILY SSF51735 118 243 4.88E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS04270 75e6a51f1bd5c24313fb120e3120018c 333 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 146 167 - T 22-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 SCD_RS04270 75e6a51f1bd5c24313fb120e3120018c 333 SUPERFAMILY SSF50129 1 151 2.74E-37 T 22-04-2016 IPR011032 GroES-like SCD_RS04270 75e6a51f1bd5c24313fb120e3120018c 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 87 2.2E-8 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SCD_RS04270 75e6a51f1bd5c24313fb120e3120018c 333 PANTHER PTHR11695:SF294 15 333 5.7E-103 T 22-04-2016 SCD_RS04270 75e6a51f1bd5c24313fb120e3120018c 333 SMART SM00829 10 330 2.5E-48 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SCD_RS04270 75e6a51f1bd5c24313fb120e3120018c 333 Gene3D G3DSA:3.90.180.10 1 151 4.3E-47 T 22-04-2016 IPR011032 GroES-like SCD_RS04270 75e6a51f1bd5c24313fb120e3120018c 333 Gene3D G3DSA:3.40.50.720 152 242 3.4E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS04270 75e6a51f1bd5c24313fb120e3120018c 333 PANTHER PTHR11695 15 333 5.7E-103 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SCD_RS03370 ebd8b5381049c894a2b53bf0ffb8f1ee 172 PANTHER PTHR30128:SF18 9 170 2.1E-42 T 22-04-2016 SCD_RS03370 ebd8b5381049c894a2b53bf0ffb8f1ee 172 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 66 169 1.0E-42 T 22-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 SCD_RS03370 ebd8b5381049c894a2b53bf0ffb8f1ee 172 SUPERFAMILY SSF103088 53 168 1.44E-28 T 22-04-2016 IPR006665 OmpA-like domain SCD_RS03370 ebd8b5381049c894a2b53bf0ffb8f1ee 172 PRINTS PR01021 OMPA domain signature 99 114 2.1E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SCD_RS03370 ebd8b5381049c894a2b53bf0ffb8f1ee 172 PRINTS PR01021 OMPA domain signature 114 130 2.1E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SCD_RS03370 ebd8b5381049c894a2b53bf0ffb8f1ee 172 PRINTS PR01021 OMPA domain signature 69 91 2.1E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SCD_RS03370 ebd8b5381049c894a2b53bf0ffb8f1ee 172 Pfam PF00691 OmpA family 68 163 5.3E-18 T 22-04-2016 IPR006665 OmpA-like domain SCD_RS03370 ebd8b5381049c894a2b53bf0ffb8f1ee 172 PANTHER PTHR30128 9 170 2.1E-42 T 22-04-2016 SCD_RS03370 ebd8b5381049c894a2b53bf0ffb8f1ee 172 Gene3D G3DSA:3.30.1330.60 59 169 6.2E-29 T 22-04-2016 IPR006665 OmpA-like domain SCD_RS01695 418a18de84dd093701f2d7476e394a50 404 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 304 395 1.0E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS01695 418a18de84dd093701f2d7476e394a50 404 SMART SM00387 302 397 2.6E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS01695 418a18de84dd093701f2d7476e394a50 404 Pfam PF13185 GAF domain 43 181 9.4E-12 T 22-04-2016 IPR003018 GAF domain GO:0005515 SCD_RS01695 418a18de84dd093701f2d7476e394a50 404 SUPERFAMILY SSF55874 265 394 2.88E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS01695 418a18de84dd093701f2d7476e394a50 404 PANTHER PTHR24421 190 396 1.1E-45 T 22-04-2016 SCD_RS01695 418a18de84dd093701f2d7476e394a50 404 Pfam PF07730 Histidine kinase 197 262 1.8E-13 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SCD_RS01695 418a18de84dd093701f2d7476e394a50 404 Gene3D G3DSA:3.30.450.40 28 188 4.3E-22 T 22-04-2016 IPR029016 GAF domain-like SCD_RS01695 418a18de84dd093701f2d7476e394a50 404 SUPERFAMILY SSF55781 27 188 1.31E-20 T 22-04-2016 IPR029016 GAF domain-like SCD_RS01695 418a18de84dd093701f2d7476e394a50 404 SMART SM00065 43 190 5.5E-8 T 22-04-2016 IPR003018 GAF domain GO:0005515 SCD_RS01695 418a18de84dd093701f2d7476e394a50 404 PANTHER PTHR24421:SF25 190 396 1.1E-45 T 22-04-2016 SCD_RS01695 418a18de84dd093701f2d7476e394a50 404 Gene3D G3DSA:3.30.565.10 300 396 4.6E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS01695 418a18de84dd093701f2d7476e394a50 404 Gene3D G3DSA:3.30.565.10 244 262 4.6E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS09725 66fbd6f7bb5a8855e2622aa352c36416 458 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 369 447 7.0E-13 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS09725 66fbd6f7bb5a8855e2622aa352c36416 458 PANTHER PTHR22573 7 457 3.2E-183 T 22-04-2016 SCD_RS09725 66fbd6f7bb5a8855e2622aa352c36416 458 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 255 357 7.0E-21 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS09725 66fbd6f7bb5a8855e2622aa352c36416 458 SUPERFAMILY SSF55957 363 457 3.4E-20 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS09725 66fbd6f7bb5a8855e2622aa352c36416 458 Gene3D G3DSA:3.40.120.10 169 246 4.3E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS09725 66fbd6f7bb5a8855e2622aa352c36416 458 SUPERFAMILY SSF53738 6 138 4.32E-39 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS09725 66fbd6f7bb5a8855e2622aa352c36416 458 Gene3D G3DSA:3.40.120.10 6 126 1.0E-33 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS09725 66fbd6f7bb5a8855e2622aa352c36416 458 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS09725 66fbd6f7bb5a8855e2622aa352c36416 458 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 152 250 7.2E-26 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS09725 66fbd6f7bb5a8855e2622aa352c36416 458 PANTHER PTHR22573:SF28 7 457 3.2E-183 T 22-04-2016 SCD_RS09725 66fbd6f7bb5a8855e2622aa352c36416 458 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 230 245 2.3E-23 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS09725 66fbd6f7bb5a8855e2622aa352c36416 458 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 201 214 2.3E-23 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS09725 66fbd6f7bb5a8855e2622aa352c36416 458 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 167 186 2.3E-23 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS09725 66fbd6f7bb5a8855e2622aa352c36416 458 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 2.3E-23 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS09725 66fbd6f7bb5a8855e2622aa352c36416 458 SUPERFAMILY SSF53738 151 252 1.69E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS09725 66fbd6f7bb5a8855e2622aa352c36416 458 Gene3D G3DSA:3.30.310.50 366 456 8.6E-27 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS09725 66fbd6f7bb5a8855e2622aa352c36416 458 SUPERFAMILY SSF53738 255 351 3.92E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS09725 66fbd6f7bb5a8855e2622aa352c36416 458 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 135 4.6E-35 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS09725 66fbd6f7bb5a8855e2622aa352c36416 458 Gene3D G3DSA:3.40.120.10 248 358 5.2E-43 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SCD_RS13785 02d940e25e893664db72bc99a2610ad8 150 Gene3D G3DSA:2.40.50.100 73 149 1.0E-31 T 22-04-2016 SCD_RS13785 02d940e25e893664db72bc99a2610ad8 150 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 149 7.7E-55 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SCD_RS13785 02d940e25e893664db72bc99a2610ad8 150 Pfam PF00364 Biotin-requiring enzyme 76 149 1.2E-24 T 22-04-2016 IPR000089 Biotin/lipoyl attachment SCD_RS13785 02d940e25e893664db72bc99a2610ad8 150 SUPERFAMILY SSF51230 74 149 5.63E-25 T 22-04-2016 IPR011053 Single hybrid motif SCD_RS13785 02d940e25e893664db72bc99a2610ad8 150 PANTHER PTHR23151 1 149 5.4E-48 T 22-04-2016 SCD_RS13785 02d940e25e893664db72bc99a2610ad8 150 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 106 123 - T 22-04-2016 IPR001882 Biotin-binding site SCD_RS13785 02d940e25e893664db72bc99a2610ad8 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 111 124 5.8E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SCD_RS13785 02d940e25e893664db72bc99a2610ad8 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 96 110 5.8E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SCD_RS13785 02d940e25e893664db72bc99a2610ad8 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 79 92 5.8E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SCD_RS11005 78f9fe0ecd49dc5f696b92b3d4695f6a 221 Gene3D G3DSA:1.20.1440.100 15 79 8.0E-32 T 22-04-2016 SCD_RS11005 78f9fe0ecd49dc5f696b92b3d4695f6a 221 PANTHER PTHR10000:SF10 1 221 8.6E-49 T 22-04-2016 SCD_RS11005 78f9fe0ecd49dc5f696b92b3d4695f6a 221 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 204 5.3E-40 T 22-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial SCD_RS11005 78f9fe0ecd49dc5f696b92b3d4695f6a 221 PANTHER PTHR10000 1 221 8.6E-49 T 22-04-2016 SCD_RS11005 78f9fe0ecd49dc5f696b92b3d4695f6a 221 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 191 6.9E-38 T 22-04-2016 SCD_RS11005 78f9fe0ecd49dc5f696b92b3d4695f6a 221 Gene3D G3DSA:3.40.50.1000 80 220 2.3E-47 T 22-04-2016 IPR023214 HAD-like domain SCD_RS11005 78f9fe0ecd49dc5f696b92b3d4695f6a 221 SUPERFAMILY SSF56784 2 213 3.17E-31 T 22-04-2016 IPR023214 HAD-like domain SCD_RS11005 78f9fe0ecd49dc5f696b92b3d4695f6a 221 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 193 6.5E-21 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 SCD_RS14935 9818c398d34a8648e64ee61ea63ab5b1 610 SUPERFAMILY SSF53697 245 610 1.02E-112 T 22-04-2016 SCD_RS14935 9818c398d34a8648e64ee61ea63ab5b1 610 Gene3D G3DSA:3.40.50.10490 444 610 3.8E-65 T 22-04-2016 SCD_RS14935 9818c398d34a8648e64ee61ea63ab5b1 610 Gene3D G3DSA:3.60.20.10 2 232 3.4E-76 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SCD_RS14935 9818c398d34a8648e64ee61ea63ab5b1 610 Pfam PF13522 Glutamine amidotransferase domain 64 182 3.8E-21 T 22-04-2016 SCD_RS14935 9818c398d34a8648e64ee61ea63ab5b1 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.077 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SCD_RS14935 9818c398d34a8648e64ee61ea63ab5b1 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 3.0E-258 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SCD_RS14935 9818c398d34a8648e64ee61ea63ab5b1 610 PANTHER PTHR10937 1 610 0.0 T 22-04-2016 SCD_RS14935 9818c398d34a8648e64ee61ea63ab5b1 610 PANTHER PTHR10937:SF0 1 610 0.0 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SCD_RS14935 9818c398d34a8648e64ee61ea63ab5b1 610 SUPERFAMILY SSF56235 2 234 2.14E-70 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SCD_RS14935 9818c398d34a8648e64ee61ea63ab5b1 610 Gene3D G3DSA:3.40.50.10490 244 443 3.1E-71 T 22-04-2016 SCD_RS14935 9818c398d34a8648e64ee61ea63ab5b1 610 Pfam PF01380 SIS domain 294 418 9.6E-29 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SCD_RS14935 9818c398d34a8648e64ee61ea63ab5b1 610 Pfam PF01380 SIS domain 466 591 4.7E-27 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SCD_RS04240 25948fd68b12a0b41fd26be37a25beb6 437 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 210 437 2.6E-79 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 SCD_RS04240 25948fd68b12a0b41fd26be37a25beb6 437 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 4 437 3.3E-174 T 22-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 SCD_RS04240 25948fd68b12a0b41fd26be37a25beb6 437 PANTHER PTHR23151:SF68 4 437 6.9E-194 T 22-04-2016 SCD_RS04240 25948fd68b12a0b41fd26be37a25beb6 437 Pfam PF00364 Biotin-requiring enzyme 5 75 6.8E-18 T 22-04-2016 IPR000089 Biotin/lipoyl attachment SCD_RS04240 25948fd68b12a0b41fd26be37a25beb6 437 Gene3D G3DSA:4.10.320.10 137 181 7.8E-17 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SCD_RS04240 25948fd68b12a0b41fd26be37a25beb6 437 Gene3D G3DSA:3.30.559.10 200 437 1.0E-82 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain SCD_RS04240 25948fd68b12a0b41fd26be37a25beb6 437 SUPERFAMILY SSF47005 133 177 2.09E-10 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SCD_RS04240 25948fd68b12a0b41fd26be37a25beb6 437 Gene3D G3DSA:2.40.50.100 2 96 4.2E-19 T 22-04-2016 SCD_RS04240 25948fd68b12a0b41fd26be37a25beb6 437 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SCD_RS04240 25948fd68b12a0b41fd26be37a25beb6 437 SUPERFAMILY SSF51230 3 97 1.44E-21 T 22-04-2016 IPR011053 Single hybrid motif SCD_RS04240 25948fd68b12a0b41fd26be37a25beb6 437 SUPERFAMILY SSF52777 199 437 1.47E-83 T 22-04-2016 SCD_RS04240 25948fd68b12a0b41fd26be37a25beb6 437 Pfam PF02817 e3 binding domain 141 173 3.4E-12 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SCD_RS04240 25948fd68b12a0b41fd26be37a25beb6 437 PANTHER PTHR23151 4 437 6.9E-194 T 22-04-2016 SCD_RS12605 93a8e987d8d16bae2dcbc7c469f43f7a 767 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 161 4.4E-10 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SCD_RS12605 93a8e987d8d16bae2dcbc7c469f43f7a 767 SUPERFAMILY SSF56935 265 767 8.42E-87 T 22-04-2016 SCD_RS12605 93a8e987d8d16bae2dcbc7c469f43f7a 767 SUPERFAMILY SSF56935 30 228 8.42E-87 T 22-04-2016 SCD_RS12605 93a8e987d8d16bae2dcbc7c469f43f7a 767 Gene3D G3DSA:2.40.170.20 165 766 4.7E-74 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SCD_RS12605 93a8e987d8d16bae2dcbc7c469f43f7a 767 Pfam PF00593 TonB dependent receptor 518 765 5.9E-31 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SCD_RS12605 93a8e987d8d16bae2dcbc7c469f43f7a 767 PANTHER PTHR32552:SF0 262 767 2.1E-66 T 22-04-2016 SCD_RS12605 93a8e987d8d16bae2dcbc7c469f43f7a 767 PANTHER PTHR32552:SF0 27 228 2.1E-66 T 22-04-2016 SCD_RS12605 93a8e987d8d16bae2dcbc7c469f43f7a 767 PANTHER PTHR32552 262 767 2.1E-66 T 22-04-2016 SCD_RS12605 93a8e987d8d16bae2dcbc7c469f43f7a 767 PANTHER PTHR32552 27 228 2.1E-66 T 22-04-2016 SCD_RS12605 93a8e987d8d16bae2dcbc7c469f43f7a 767 Gene3D G3DSA:2.170.130.10 27 164 9.2E-18 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 SUPERFAMILY SSF57783 629 672 3.57E-12 T 22-04-2016 SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 PANTHER PTHR11390 1 749 0.0 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 622 1.5E-242 T 22-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 Pfam PF01131 DNA topoisomerase 134 559 2.4E-128 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 695 53.293 T 22-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 Gene3D G3DSA:3.30.65.10 592 622 2.8E-12 T 22-04-2016 SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 Gene3D G3DSA:3.30.65.10 629 672 1.1E-13 T 22-04-2016 SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 679 717 2.2E-12 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 588 622 7.7E-15 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 637 673 1.8E-14 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 SMART SM00493 3 103 1.1E-29 T 22-04-2016 IPR006171 Toprim domain SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 289 311 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 Pfam PF01751 Toprim domain 5 117 1.2E-27 T 22-04-2016 IPR006171 Toprim domain SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 Gene3D G3DSA:2.70.20.10 188 323 1.2E-28 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 Gene3D G3DSA:2.70.20.10 326 468 1.0E-35 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 Gene3D G3DSA:1.10.460.10 139 186 1.1E-59 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 Gene3D G3DSA:1.10.460.10 469 591 1.1E-59 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 SMART SM00436 108 196 4.0E-50 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 SMART SM00437 252 522 4.3E-110 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 Gene3D G3DSA:3.40.50.140 1 138 1.2E-42 T 22-04-2016 IPR006171 Toprim domain SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 SUPERFAMILY SSF56712 4 600 4.58E-189 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 166 184 3.1E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 302 311 3.1E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 485 499 3.1E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 380 396 3.1E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 3.1E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SCD_RS00030 d57b82b9e3e84eebdcc218a26e324e63 760 PANTHER PTHR11390:SF27 1 749 0.0 T 22-04-2016 SCD_RS10985 22497e46f1af894408f461d4062ba192 457 Pfam PF12626 Polymerase A arginine-rich C-terminus 326 440 8.9E-44 T 22-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain SCD_RS10985 22497e46f1af894408f461d4062ba192 457 SUPERFAMILY SSF81301 27 181 7.41E-39 T 22-04-2016 SCD_RS10985 22497e46f1af894408f461d4062ba192 457 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 12 443 36.266 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 SCD_RS10985 22497e46f1af894408f461d4062ba192 457 SUPERFAMILY SSF81891 184 417 7.98E-52 T 22-04-2016 SCD_RS10985 22497e46f1af894408f461d4062ba192 457 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 212 273 1.0E-17 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain SCD_RS10985 22497e46f1af894408f461d4062ba192 457 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 23 442 1.4E-152 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 SCD_RS10985 22497e46f1af894408f461d4062ba192 457 Gene3D G3DSA:1.10.3090.10 185 416 9.8E-49 T 22-04-2016 SCD_RS10985 22497e46f1af894408f461d4062ba192 457 PANTHER PTHR13734 1 317 1.4E-104 T 22-04-2016 SCD_RS10985 22497e46f1af894408f461d4062ba192 457 PANTHER PTHR13734:SF47 1 317 1.4E-104 T 22-04-2016 SCD_RS10985 22497e46f1af894408f461d4062ba192 457 Pfam PF01743 Poly A polymerase head domain 53 185 2.6E-35 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 SCD_RS10985 22497e46f1af894408f461d4062ba192 457 Gene3D G3DSA:3.30.460.10 36 184 4.4E-47 T 22-04-2016 SCD_RS12765 fa28625087f3eaeedb5cadf5779a7d81 172 PANTHER PTHR30128:SF18 8 170 5.3E-41 T 22-04-2016 SCD_RS12765 fa28625087f3eaeedb5cadf5779a7d81 172 Pfam PF00691 OmpA family 68 163 2.1E-17 T 22-04-2016 IPR006665 OmpA-like domain SCD_RS12765 fa28625087f3eaeedb5cadf5779a7d81 172 PRINTS PR01021 OMPA domain signature 99 114 2.7E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SCD_RS12765 fa28625087f3eaeedb5cadf5779a7d81 172 PRINTS PR01021 OMPA domain signature 69 91 2.7E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SCD_RS12765 fa28625087f3eaeedb5cadf5779a7d81 172 PRINTS PR01021 OMPA domain signature 114 130 2.7E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SCD_RS12765 fa28625087f3eaeedb5cadf5779a7d81 172 PANTHER PTHR30128 8 170 5.3E-41 T 22-04-2016 SCD_RS12765 fa28625087f3eaeedb5cadf5779a7d81 172 SUPERFAMILY SSF103088 49 168 7.46E-28 T 22-04-2016 IPR006665 OmpA-like domain SCD_RS12765 fa28625087f3eaeedb5cadf5779a7d81 172 Gene3D G3DSA:3.30.1330.60 46 168 9.1E-28 T 22-04-2016 IPR006665 OmpA-like domain SCD_RS12765 fa28625087f3eaeedb5cadf5779a7d81 172 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 66 169 1.5E-40 T 22-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 SCD_RS06595 97f757ea01f510551d611b20e4a26ea5 263 PANTHER PTHR32309 70 262 5.7E-34 T 22-04-2016 SCD_RS06595 97f757ea01f510551d611b20e4a26ea5 263 SUPERFAMILY SSF52540 94 263 3.22E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06595 97f757ea01f510551d611b20e4a26ea5 263 Gene3D G3DSA:3.40.50.300 94 263 1.9E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06595 97f757ea01f510551d611b20e4a26ea5 263 PANTHER PTHR32309:SF13 70 262 5.7E-34 T 22-04-2016 SCD_RS07950 1ea8ef1cae0d287057e338fe19f40ea0 1145 SMART SM00982 1008 1108 4.3E-49 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SCD_RS07950 1ea8ef1cae0d287057e338fe19f40ea0 1145 SUPERFAMILY SSF52540 11 343 2.44E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07950 1ea8ef1cae0d287057e338fe19f40ea0 1145 SUPERFAMILY SSF52540 782 990 9.58E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07950 1ea8ef1cae0d287057e338fe19f40ea0 1145 SUPERFAMILY SSF52540 522 782 3.19E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07950 1ea8ef1cae0d287057e338fe19f40ea0 1145 Pfam PF03461 TRCF domain 1010 1101 1.4E-26 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SCD_RS07950 1ea8ef1cae0d287057e338fe19f40ea0 1145 SMART SM00490 825 909 1.4E-17 T 22-04-2016 IPR001650 Helicase, C-terminal SCD_RS07950 1ea8ef1cae0d287057e338fe19f40ea0 1145 PANTHER PTHR14025 378 1141 0.0 T 22-04-2016 SCD_RS07950 1ea8ef1cae0d287057e338fe19f40ea0 1145 PANTHER PTHR14025:SF21 378 1141 0.0 T 22-04-2016 SCD_RS07950 1ea8ef1cae0d287057e338fe19f40ea0 1145 SMART SM01058 478 575 4.9E-46 T 22-04-2016 IPR003711 CarD-like/TRCF domain SCD_RS07950 1ea8ef1cae0d287057e338fe19f40ea0 1145 SUPERFAMILY SSF52540 350 462 8.5E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07950 1ea8ef1cae0d287057e338fe19f40ea0 1145 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 144 1081 0.0 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 SCD_RS07950 1ea8ef1cae0d287057e338fe19f40ea0 1145 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 28 1110 28.607 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 SCD_RS07950 1ea8ef1cae0d287057e338fe19f40ea0 1145 Pfam PF00270 DEAD/DEAH box helicase 604 763 6.8E-20 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SCD_RS07950 1ea8ef1cae0d287057e338fe19f40ea0 1145 Pfam PF00271 Helicase conserved C-terminal domain 805 908 3.3E-18 T 22-04-2016 IPR001650 Helicase, C-terminal SCD_RS07950 1ea8ef1cae0d287057e338fe19f40ea0 1145 Pfam PF02559 CarD-like/TRCF domain 480 574 3.9E-25 T 22-04-2016 IPR003711 CarD-like/TRCF domain SCD_RS07950 1ea8ef1cae0d287057e338fe19f40ea0 1145 SUPERFAMILY SSF143517 995 1144 5.1E-41 T 22-04-2016 SCD_RS07950 1ea8ef1cae0d287057e338fe19f40ea0 1145 Gene3D G3DSA:3.40.50.300 587 785 1.4E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07950 1ea8ef1cae0d287057e338fe19f40ea0 1145 Gene3D G3DSA:3.40.50.300 797 963 2.8E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07950 1ea8ef1cae0d287057e338fe19f40ea0 1145 SMART SM00487 599 789 6.5E-36 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SCD_RS07950 1ea8ef1cae0d287057e338fe19f40ea0 1145 SUPERFAMILY SSF141259 471 547 1.7E-21 T 22-04-2016 IPR003711 CarD-like/TRCF domain SCD_RS07950 1ea8ef1cae0d287057e338fe19f40ea0 1145 Gene3D G3DSA:3.30.2060.10 127 200 8.1E-13 T 22-04-2016 SCD_RS04595 4f4cc804cd210bf794682ca15d51d7ca 630 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 101 593 3.0E-239 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 SCD_RS04595 4f4cc804cd210bf794682ca15d51d7ca 630 SMART SM00382 186 325 5.1E-25 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS04595 4f4cc804cd210bf794682ca15d51d7ca 630 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 2.8E-45 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SCD_RS04595 4f4cc804cd210bf794682ca15d51d7ca 630 SUPERFAMILY SSF140990 404 601 1.57E-75 T 22-04-2016 SCD_RS04595 4f4cc804cd210bf794682ca15d51d7ca 630 Pfam PF06480 FtsH Extracellular 9 86 1.1E-9 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 SCD_RS04595 4f4cc804cd210bf794682ca15d51d7ca 630 PANTHER PTHR23076 4 603 0.0 T 22-04-2016 SCD_RS04595 4f4cc804cd210bf794682ca15d51d7ca 630 SUPERFAMILY SSF52540 147 393 2.22E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04595 4f4cc804cd210bf794682ca15d51d7ca 630 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 2 615 37.381 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 SCD_RS04595 4f4cc804cd210bf794682ca15d51d7ca 630 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 SCD_RS04595 4f4cc804cd210bf794682ca15d51d7ca 630 Gene3D G3DSA:3.40.50.300 148 333 1.6E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04595 4f4cc804cd210bf794682ca15d51d7ca 630 Pfam PF01434 Peptidase family M41 384 592 1.3E-79 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 SCD_RS04595 4f4cc804cd210bf794682ca15d51d7ca 630 Gene3D G3DSA:1.10.8.60 334 407 7.9E-27 T 22-04-2016 SCD_RS10565 320c5e9a2b8a900ed44095a79e92137e 194 PRINTS PR01703 Manganese superoxide dismutase signature 66 79 2.4E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SCD_RS10565 320c5e9a2b8a900ed44095a79e92137e 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.4E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SCD_RS10565 320c5e9a2b8a900ed44095a79e92137e 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 2.4E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SCD_RS10565 320c5e9a2b8a900ed44095a79e92137e 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.4E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SCD_RS10565 320c5e9a2b8a900ed44095a79e92137e 194 PRINTS PR01703 Manganese superoxide dismutase signature 119 127 2.4E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SCD_RS10565 320c5e9a2b8a900ed44095a79e92137e 194 Gene3D G3DSA:1.10.287.990 20 83 5.4E-23 T 22-04-2016 SCD_RS10565 320c5e9a2b8a900ed44095a79e92137e 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 83 1.1E-33 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SCD_RS10565 320c5e9a2b8a900ed44095a79e92137e 194 PIRSF PIRSF000349 1 194 4.7E-79 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SCD_RS10565 320c5e9a2b8a900ed44095a79e92137e 194 SUPERFAMILY SSF46609 1 88 3.01E-34 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SCD_RS10565 320c5e9a2b8a900ed44095a79e92137e 194 SUPERFAMILY SSF54719 85 193 1.31E-39 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SCD_RS10565 320c5e9a2b8a900ed44095a79e92137e 194 PANTHER PTHR11404:SF8 1 194 2.6E-98 T 22-04-2016 SCD_RS10565 320c5e9a2b8a900ed44095a79e92137e 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 90 191 8.6E-35 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SCD_RS10565 320c5e9a2b8a900ed44095a79e92137e 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SCD_RS10565 320c5e9a2b8a900ed44095a79e92137e 194 PANTHER PTHR11404 1 194 2.6E-98 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SCD_RS03235 7397741a6d5856f95724eca06476c77e 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03235 7397741a6d5856f95724eca06476c77e 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.729 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03235 7397741a6d5856f95724eca06476c77e 128 Gene3D G3DSA:3.90.1030.10 1 117 6.3E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03235 7397741a6d5856f95724eca06476c77e 128 PANTHER PTHR14413 1 119 2.8E-64 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03235 7397741a6d5856f95724eca06476c77e 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 7.4E-45 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03235 7397741a6d5856f95724eca06476c77e 128 Pfam PF01196 Ribosomal protein L17 20 115 2.1E-35 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03235 7397741a6d5856f95724eca06476c77e 128 SUPERFAMILY SSF64263 1 119 2.35E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS14385 612af9039461aa8e7fd2e479490a728d 332 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 2 320 1.8E-158 T 22-04-2016 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00010+4.2.1.11|KEGG: 00520+4.2.1.115|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6143|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 SCD_RS14385 612af9039461aa8e7fd2e479490a728d 332 Pfam PF02719 Polysaccharide biosynthesis protein 7 278 1.8E-95 T 22-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain SCD_RS14385 612af9039461aa8e7fd2e479490a728d 332 PANTHER PTHR10366 6 260 1.5E-99 T 22-04-2016 SCD_RS14385 612af9039461aa8e7fd2e479490a728d 332 SUPERFAMILY SSF51735 6 261 6.8E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS14385 612af9039461aa8e7fd2e479490a728d 332 Gene3D G3DSA:3.40.50.720 4 240 1.4E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS14385 612af9039461aa8e7fd2e479490a728d 332 PANTHER PTHR10366:SF360 6 260 1.5E-99 T 22-04-2016 SCD_RS07725 e9fa72ff9d7da1ce6e636976ef8e6e4c 214 Pfam PF03695 Uncharacterised protein family (UPF0149) 1 174 2.2E-28 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 SCD_RS07725 e9fa72ff9d7da1ce6e636976ef8e6e4c 214 Pfam PF02810 SEC-C motif 191 209 4.2E-10 T 22-04-2016 IPR004027 SEC-C motif SCD_RS07725 e9fa72ff9d7da1ce6e636976ef8e6e4c 214 SUPERFAMILY SSF101327 4 172 9.94E-22 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 SCD_RS07725 e9fa72ff9d7da1ce6e636976ef8e6e4c 214 Gene3D G3DSA:3.10.450.50 178 209 1.7E-11 T 22-04-2016 IPR032710 NTF2-like domain SCD_RS07725 e9fa72ff9d7da1ce6e636976ef8e6e4c 214 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 1 173 1.1E-27 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 SCD_RS07725 e9fa72ff9d7da1ce6e636976ef8e6e4c 214 SUPERFAMILY SSF103642 189 209 4.58E-7 T 22-04-2016 SCD_RS12305 95a5861c548786785db9351aaca4c868 457 Gene3D G3DSA:3.40.1190.10 90 311 2.2E-74 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS12305 95a5861c548786785db9351aaca4c868 457 Gene3D G3DSA:3.40.1390.10 16 89 2.4E-26 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS12305 95a5861c548786785db9351aaca4c868 457 SUPERFAMILY SSF53244 314 445 1.6E-35 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SCD_RS12305 95a5861c548786785db9351aaca4c868 457 SUPERFAMILY SSF53623 100 311 3.53E-53 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS12305 95a5861c548786785db9351aaca4c868 457 PANTHER PTHR23135 10 444 2.7E-160 T 22-04-2016 SCD_RS12305 95a5861c548786785db9351aaca4c868 457 Pfam PF01225 Mur ligase family, catalytic domain 22 94 3.4E-12 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS12305 95a5861c548786785db9351aaca4c868 457 SUPERFAMILY SSF63418 2 97 2.75E-27 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS12305 95a5861c548786785db9351aaca4c868 457 Gene3D G3DSA:3.90.190.20 314 446 7.5E-43 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SCD_RS12305 95a5861c548786785db9351aaca4c868 457 Pfam PF08245 Mur ligase middle domain 106 294 1.6E-50 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS12305 95a5861c548786785db9351aaca4c868 457 PANTHER PTHR23135:SF3 10 444 2.7E-160 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS12305 95a5861c548786785db9351aaca4c868 457 Pfam PF02875 Mur ligase family, glutamate ligase domain 326 395 5.7E-15 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SCD_RS12305 95a5861c548786785db9351aaca4c868 457 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 2 447 35.32 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS12305 95a5861c548786785db9351aaca4c868 457 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 27 446 2.1E-141 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS14955 9b1f2abb165282dae209cf2a627cedba 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site SCD_RS14955 9b1f2abb165282dae209cf2a627cedba 287 Pfam PF00231 ATP synthase 5 286 2.7E-92 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS14955 9b1f2abb165282dae209cf2a627cedba 287 Gene3D G3DSA:1.10.287.80 236 282 7.7E-28 T 22-04-2016 SCD_RS14955 9b1f2abb165282dae209cf2a627cedba 287 SUPERFAMILY SSF52943 3 287 1.96E-94 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain SCD_RS14955 9b1f2abb165282dae209cf2a627cedba 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 1.0E-104 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS14955 9b1f2abb165282dae209cf2a627cedba 287 Gene3D G3DSA:1.10.287.80 202 235 1.1E-40 T 22-04-2016 SCD_RS14955 9b1f2abb165282dae209cf2a627cedba 287 Gene3D G3DSA:1.10.287.80 19 60 1.1E-40 T 22-04-2016 SCD_RS14955 9b1f2abb165282dae209cf2a627cedba 287 PANTHER PTHR11693 1 287 9.7E-124 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS14955 9b1f2abb165282dae209cf2a627cedba 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 35.183 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS14955 9b1f2abb165282dae209cf2a627cedba 287 Gene3D G3DSA:3.40.1380.10 63 193 1.4E-41 T 22-04-2016 SCD_RS14955 9b1f2abb165282dae209cf2a627cedba 287 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 2.3E-34 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS14955 9b1f2abb165282dae209cf2a627cedba 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 2.3E-34 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS14955 9b1f2abb165282dae209cf2a627cedba 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 2.3E-34 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS14955 9b1f2abb165282dae209cf2a627cedba 287 PRINTS PR00126 ATP synthase gamma subunit signature 167 184 2.3E-34 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS04640 617edd7de2fb447cff0be78dd64d0ea4 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 6.8E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS04640 617edd7de2fb447cff0be78dd64d0ea4 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 6.8E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS04640 617edd7de2fb447cff0be78dd64d0ea4 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 6.8E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS04640 617edd7de2fb447cff0be78dd64d0ea4 219 PANTHER PTHR26402 11 213 6.8E-63 T 22-04-2016 SCD_RS04640 617edd7de2fb447cff0be78dd64d0ea4 219 SUPERFAMILY SSF52172 10 139 6.69E-34 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS04640 617edd7de2fb447cff0be78dd64d0ea4 219 SMART SM00421 154 211 2.4E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS04640 617edd7de2fb447cff0be78dd64d0ea4 219 Gene3D G3DSA:1.10.10.10 128 218 8.7E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS04640 617edd7de2fb447cff0be78dd64d0ea4 219 Gene3D G3DSA:3.40.50.2300 10 127 2.6E-34 T 22-04-2016 SCD_RS04640 617edd7de2fb447cff0be78dd64d0ea4 219 SMART SM00448 11 124 3.1E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS04640 617edd7de2fb447cff0be78dd64d0ea4 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS04640 617edd7de2fb447cff0be78dd64d0ea4 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 211 6.5E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS04640 617edd7de2fb447cff0be78dd64d0ea4 219 SUPERFAMILY SSF46894 144 217 1.77E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SCD_RS04640 617edd7de2fb447cff0be78dd64d0ea4 219 PANTHER PTHR26402:SF458 11 213 6.8E-63 T 22-04-2016 SCD_RS04640 617edd7de2fb447cff0be78dd64d0ea4 219 Pfam PF00072 Response regulator receiver domain 13 125 9.0E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS10655 28a9d2892a5e995950712a5388eebabb 265 PANTHER PTHR10108:SF911 78 232 2.3E-46 T 22-04-2016 SCD_RS10655 28a9d2892a5e995950712a5388eebabb 265 PANTHER PTHR10108 78 232 2.3E-46 T 22-04-2016 SCD_RS10655 28a9d2892a5e995950712a5388eebabb 265 Pfam PF13847 Methyltransferase domain 79 225 2.0E-33 T 22-04-2016 IPR025714 Methyltransferase domain SCD_RS10655 28a9d2892a5e995950712a5388eebabb 265 Gene3D G3DSA:3.40.50.150 77 244 2.2E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS10655 28a9d2892a5e995950712a5388eebabb 265 SUPERFAMILY SSF53335 63 236 1.67E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS06955 439f440fdc0bac3a9fc5d562edbb436f 308 SUPERFAMILY SSF55486 177 197 3.59E-5 T 22-04-2016 SCD_RS06955 439f440fdc0bac3a9fc5d562edbb436f 308 SUPERFAMILY SSF55486 76 150 3.59E-5 T 22-04-2016 SCD_RS06955 439f440fdc0bac3a9fc5d562edbb436f 308 Gene3D G3DSA:3.40.390.10 162 204 4.6E-8 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SCD_RS06955 439f440fdc0bac3a9fc5d562edbb436f 308 Gene3D G3DSA:3.40.390.10 248 273 4.6E-8 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SCD_RS06955 439f440fdc0bac3a9fc5d562edbb436f 308 SUPERFAMILY SSF55486 175 275 1.01E-10 T 22-04-2016 SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 PANTHER PTHR11638:SF18 1 855 0.0 T 22-04-2016 SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 603 621 1.4E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 648 666 1.4E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 710 724 1.4E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 677 695 1.4E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 767 846 8.3E-25 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 SMART SM00382 198 343 2.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 SMART SM00382 599 768 1.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 SUPERFAMILY SSF52540 159 547 1.92E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 Gene3D G3DSA:3.40.50.300 159 342 1.9E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 Gene3D G3DSA:1.10.1780.10 1 147 8.0E-47 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 Gene3D G3DSA:1.10.8.60 778 855 1.4E-27 T 22-04-2016 SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 Gene3D G3DSA:1.10.8.60 343 428 9.4E-37 T 22-04-2016 SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 633 651 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 PANTHER PTHR11638 1 855 0.0 T 22-04-2016 SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 SUPERFAMILY SSF81923 4 141 7.65E-41 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 334 2.6E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 145 2.6E-11 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 4.7E-12 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 Pfam PF07724 AAA domain (Cdc48 subfamily) 598 761 5.9E-55 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 SUPERFAMILY SSF52540 548 845 4.37E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 SMART SM01086 767 856 6.5E-33 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 Gene3D G3DSA:3.40.50.300 552 777 5.6E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05660 e10c7d27c50b5558fe2c03505ea19cfb 870 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 SCD_RS03900 9523ea3c04bb88473d29a57aac674273 355 PANTHER PTHR11933:SF10 1 354 2.8E-183 T 22-04-2016 SCD_RS03900 9523ea3c04bb88473d29a57aac674273 355 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 4 355 38.984 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SCD_RS03900 9523ea3c04bb88473d29a57aac674273 355 Gene3D G3DSA:3.40.50.620 2 209 1.2E-93 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS03900 9523ea3c04bb88473d29a57aac674273 355 Gene3D G3DSA:2.30.30.280 211 274 6.8E-31 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 SCD_RS03900 9523ea3c04bb88473d29a57aac674273 355 PANTHER PTHR11933 1 354 2.8E-183 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SCD_RS03900 9523ea3c04bb88473d29a57aac674273 355 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 4 354 2.2E-131 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SCD_RS03900 9523ea3c04bb88473d29a57aac674273 355 Gene3D G3DSA:2.40.30.10 276 354 1.2E-26 T 22-04-2016 SCD_RS03900 9523ea3c04bb88473d29a57aac674273 355 Pfam PF03054 tRNA methyl transferase 4 354 4.6E-135 T 22-04-2016 SCD_RS03900 9523ea3c04bb88473d29a57aac674273 355 SUPERFAMILY SSF52402 2 242 1.41E-57 T 22-04-2016 SCD_RS06940 5e0146965881e0dd2398b43dc10d8ee5 445 PANTHER PTHR24031 1 433 1.2E-179 T 22-04-2016 SCD_RS06940 5e0146965881e0dd2398b43dc10d8ee5 445 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 435 49.278 T 22-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 SCD_RS06940 5e0146965881e0dd2398b43dc10d8ee5 445 PANTHER PTHR24031:SF261 1 433 1.2E-179 T 22-04-2016 SCD_RS06940 5e0146965881e0dd2398b43dc10d8ee5 445 SUPERFAMILY SSF52540 77 362 4.5E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06940 5e0146965881e0dd2398b43dc10d8ee5 445 SMART SM00487 20 225 3.2E-57 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SCD_RS06940 5e0146965881e0dd2398b43dc10d8ee5 445 SMART SM00490 261 342 2.2E-31 T 22-04-2016 IPR001650 Helicase, C-terminal SCD_RS06940 5e0146965881e0dd2398b43dc10d8ee5 445 Gene3D G3DSA:3.40.50.300 1 214 1.7E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06940 5e0146965881e0dd2398b43dc10d8ee5 445 Gene3D G3DSA:3.40.50.300 215 373 8.6E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06940 5e0146965881e0dd2398b43dc10d8ee5 445 Pfam PF00271 Helicase conserved C-terminal domain 233 342 1.7E-26 T 22-04-2016 IPR001650 Helicase, C-terminal SCD_RS06940 5e0146965881e0dd2398b43dc10d8ee5 445 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SCD_RS06940 5e0146965881e0dd2398b43dc10d8ee5 445 Pfam PF00270 DEAD/DEAH box helicase 25 198 1.9E-49 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SCD_RS08625 662aed639ef60645b58181a1d1ce5cee 768 SMART SM00843 702 767 2.0E-37 T 22-04-2016 IPR018541 FtsK gamma domain SCD_RS08625 662aed639ef60645b58181a1d1ce5cee 768 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 31 204 7.7E-49 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region SCD_RS08625 662aed639ef60645b58181a1d1ce5cee 768 PANTHER PTHR22683:SF41 266 765 4.7E-261 T 22-04-2016 SCD_RS08625 662aed639ef60645b58181a1d1ce5cee 768 SUPERFAMILY SSF52540 364 671 1.59E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08625 662aed639ef60645b58181a1d1ce5cee 768 Gene3D G3DSA:3.40.50.300 364 666 3.4E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08625 662aed639ef60645b58181a1d1ce5cee 768 SMART SM00382 425 620 4.3E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS08625 662aed639ef60645b58181a1d1ce5cee 768 SUPERFAMILY SSF46785 702 765 6.19E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS08625 662aed639ef60645b58181a1d1ce5cee 768 PANTHER PTHR22683 266 765 4.7E-261 T 22-04-2016 SCD_RS08625 662aed639ef60645b58181a1d1ce5cee 768 Pfam PF01580 FtsK/SpoIIIE family 389 599 2.5E-66 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SCD_RS08625 662aed639ef60645b58181a1d1ce5cee 768 Pfam PF09397 Ftsk gamma domain 704 764 3.8E-27 T 22-04-2016 IPR018541 FtsK gamma domain SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 628 43.652 T 22-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 Pfam PF03979 Sigma-70 factor, region 1.1 18 94 1.8E-28 T 22-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 Gene3D G3DSA:1.10.10.10 557 628 4.1E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 PANTHER PTHR30603 14 166 2.6E-237 T 22-04-2016 SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 PANTHER PTHR30603 342 631 2.6E-237 T 22-04-2016 SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 PANTHER PTHR30603:SF0 14 166 2.6E-237 T 22-04-2016 SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 PANTHER PTHR30603:SF0 342 631 2.6E-237 T 22-04-2016 SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 391 627 1.7E-120 T 22-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 588 614 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 Pfam PF04542 Sigma-70 region 2 395 464 1.8E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 SUPERFAMILY SSF88659 525 627 3.92E-27 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 391 616 1.7E-37 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 Pfam PF00140 Sigma-70 factor, region 1.2 112 144 3.0E-14 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 PRINTS PR00046 Major sigma-70 factor signature 443 451 3.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 PRINTS PR00046 Major sigma-70 factor signature 588 603 3.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 PRINTS PR00046 Major sigma-70 factor signature 603 614 3.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 PRINTS PR00046 Major sigma-70 factor signature 419 432 3.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 PRINTS PR00046 Major sigma-70 factor signature 567 579 3.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 Gene3D G3DSA:1.10.10.10 468 519 9.0E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 Gene3D G3DSA:1.10.601.10 126 464 3.4E-123 T 22-04-2016 SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 SUPERFAMILY SSF88946 129 462 1.7E-94 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 SUPERFAMILY SSF88659 468 541 5.23E-20 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 Pfam PF04539 Sigma-70 region 3 474 549 2.9E-26 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 419 432 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 Pfam PF04546 Sigma-70, non-essential region 153 364 1.4E-63 T 22-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS12095 5554ecbbcae3ee45a0f694f54ed93e51 631 Pfam PF04545 Sigma-70, region 4 563 616 2.3E-19 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS01280 010743bf95a421f3eeebd62a8b499747 455 Pfam PF00899 ThiF family 172 427 4.9E-35 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SCD_RS01280 010743bf95a421f3eeebd62a8b499747 455 Gene3D G3DSA:3.40.50.720 169 431 7.3E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS01280 010743bf95a421f3eeebd62a8b499747 455 PANTHER PTHR10953 147 307 2.4E-23 T 22-04-2016 SCD_RS01280 010743bf95a421f3eeebd62a8b499747 455 PANTHER PTHR10953:SF145 147 307 2.4E-23 T 22-04-2016 SCD_RS01280 010743bf95a421f3eeebd62a8b499747 455 SUPERFAMILY SSF69572 168 434 3.01E-45 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SCD_RS09830 9793f12625920a1f9417d0a92c96aee6 212 PIRSF PIRSF001435 1 210 1.0E-54 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SCD_RS09830 9793f12625920a1f9417d0a92c96aee6 212 SMART SM00278 109 128 0.0041 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SCD_RS09830 9793f12625920a1f9417d0a92c96aee6 212 SUPERFAMILY SSF48150 3 207 2.36E-73 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SCD_RS09830 9793f12625920a1f9417d0a92c96aee6 212 TIGRFAM TIGR01083 nth: endonuclease III 5 194 2.5E-86 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SCD_RS09830 9793f12625920a1f9417d0a92c96aee6 212 PANTHER PTHR10359 1 208 3.6E-87 T 22-04-2016 SCD_RS09830 9793f12625920a1f9417d0a92c96aee6 212 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 SCD_RS09830 9793f12625920a1f9417d0a92c96aee6 212 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.708 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SCD_RS09830 9793f12625920a1f9417d0a92c96aee6 212 PANTHER PTHR10359:SF18 1 208 3.6E-87 T 22-04-2016 SCD_RS09830 9793f12625920a1f9417d0a92c96aee6 212 Gene3D G3DSA:1.10.340.30 24 122 3.7E-35 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SCD_RS09830 9793f12625920a1f9417d0a92c96aee6 212 Gene3D G3DSA:1.10.1670.10 123 208 1.4E-35 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SCD_RS09830 9793f12625920a1f9417d0a92c96aee6 212 Pfam PF00633 Helix-hairpin-helix motif 100 127 2.1E-9 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 SCD_RS09830 9793f12625920a1f9417d0a92c96aee6 212 SMART SM00525 186 206 6.0E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 SCD_RS09830 9793f12625920a1f9417d0a92c96aee6 212 SMART SM00478 38 185 8.7E-59 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SCD_RS09830 9793f12625920a1f9417d0a92c96aee6 212 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 169 8.9E-21 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SCD_RS03250 1dca11ec2bc556843e6c6d49a7e06ddc 150 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 150 1.7E-55 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SCD_RS03250 1dca11ec2bc556843e6c6d49a7e06ddc 150 SUPERFAMILY SSF50249 3 150 1.34E-58 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS03250 1dca11ec2bc556843e6c6d49a7e06ddc 150 PANTHER PTHR10302 3 131 4.1E-53 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SCD_RS03250 1dca11ec2bc556843e6c6d49a7e06ddc 150 Hamap MF_00984 Single-stranded DNA-binding protein. 4 111 38.372 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SCD_RS03250 1dca11ec2bc556843e6c6d49a7e06ddc 150 Gene3D G3DSA:2.40.50.140 1 150 3.9E-60 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS03250 1dca11ec2bc556843e6c6d49a7e06ddc 150 Pfam PF00436 Single-strand binding protein family 4 107 9.5E-47 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 SCD_RS01045 8fecf39b3da0ce809bc57624e390f668 151 Pfam PF03652 Holliday junction resolvase 18 149 4.8E-42 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SCD_RS01045 8fecf39b3da0ce809bc57624e390f668 151 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 20 149 1.2E-36 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SCD_RS01045 8fecf39b3da0ce809bc57624e390f668 151 Gene3D G3DSA:3.30.420.140 16 150 5.4E-46 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SCD_RS01045 8fecf39b3da0ce809bc57624e390f668 151 SUPERFAMILY SSF53098 17 149 1.08E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS01045 8fecf39b3da0ce809bc57624e390f668 151 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 17 151 21.624 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SCD_RS01045 8fecf39b3da0ce809bc57624e390f668 151 SMART SM00732 17 117 4.8E-28 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SCD_RS01045 8fecf39b3da0ce809bc57624e390f668 151 PANTHER PTHR33317 11 149 4.1E-38 T 22-04-2016 SCD_RS11350 bbc260ef42ebd172f074ffd85cacba77 438 Pfam PF01966 HD domain 205 325 1.1E-16 T 22-04-2016 IPR006674 HD domain SCD_RS11350 bbc260ef42ebd172f074ffd85cacba77 438 SUPERFAMILY SSF109604 197 365 2.09E-28 T 22-04-2016 SCD_RS11350 bbc260ef42ebd172f074ffd85cacba77 438 SMART SM00471 199 335 4.7E-7 T 22-04-2016 IPR003607 HD/PDEase domain SCD_RS11350 bbc260ef42ebd172f074ffd85cacba77 438 SUPERFAMILY SSF52172 8 170 1.41E-35 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS11350 bbc260ef42ebd172f074ffd85cacba77 438 PANTHER PTHR26402 10 364 1.8E-41 T 22-04-2016 SCD_RS11350 bbc260ef42ebd172f074ffd85cacba77 438 PANTHER PTHR26402:SF515 10 364 1.8E-41 T 22-04-2016 SCD_RS11350 bbc260ef42ebd172f074ffd85cacba77 438 Pfam PF00072 Response regulator receiver domain 12 122 3.6E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS11350 bbc260ef42ebd172f074ffd85cacba77 438 Gene3D G3DSA:3.40.50.2300 10 138 2.0E-33 T 22-04-2016 SCD_RS11350 bbc260ef42ebd172f074ffd85cacba77 438 SMART SM00448 10 122 5.1E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS11350 bbc260ef42ebd172f074ffd85cacba77 438 Gene3D G3DSA:1.10.3210.10 191 362 5.8E-19 T 22-04-2016 IPR006674 HD domain SCD_RS04380 83cc33e1a359b95cdac57d61a91bc8d3 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 4 393 52.771 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SCD_RS04380 83cc33e1a359b95cdac57d61a91bc8d3 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 9 391 1.4E-192 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SCD_RS04380 83cc33e1a359b95cdac57d61a91bc8d3 397 PANTHER PTHR10314:SF3 9 391 4.7E-232 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SCD_RS04380 83cc33e1a359b95cdac57d61a91bc8d3 397 Gene3D G3DSA:3.40.50.1100 100 179 6.9E-21 T 22-04-2016 SCD_RS04380 83cc33e1a359b95cdac57d61a91bc8d3 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 83 97 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SCD_RS04380 83cc33e1a359b95cdac57d61a91bc8d3 397 PANTHER PTHR10314 9 391 4.7E-232 T 22-04-2016 SCD_RS04380 83cc33e1a359b95cdac57d61a91bc8d3 397 Gene3D G3DSA:3.40.50.1100 180 394 1.2E-99 T 22-04-2016 SCD_RS04380 83cc33e1a359b95cdac57d61a91bc8d3 397 PIRSF PIRSF001413 1 397 9.6E-167 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SCD_RS04380 83cc33e1a359b95cdac57d61a91bc8d3 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 56 380 7.5E-47 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SCD_RS04380 83cc33e1a359b95cdac57d61a91bc8d3 397 SUPERFAMILY SSF53686 5 391 1.22E-150 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SCD_RS00195 647e2828715897c02c2de4c7c88737da 522 Pfam PF01808 AICARFT/IMPCHase bienzyme 136 453 6.5E-117 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SCD_RS00195 647e2828715897c02c2de4c7c88737da 522 PIRSF PIRSF000414 1 522 4.9E-225 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SCD_RS00195 647e2828715897c02c2de4c7c88737da 522 SMART SM00798 136 454 2.0E-205 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SCD_RS00195 647e2828715897c02c2de4c7c88737da 522 Gene3D G3DSA:3.40.140.20 372 512 1.2E-58 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SCD_RS00195 647e2828715897c02c2de4c7c88737da 522 SUPERFAMILY SSF53927 214 522 1.0E-128 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SCD_RS00195 647e2828715897c02c2de4c7c88737da 522 PANTHER PTHR11692 2 522 0.0 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SCD_RS00195 647e2828715897c02c2de4c7c88737da 522 SUPERFAMILY SSF52335 4 195 9.81E-72 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SCD_RS00195 647e2828715897c02c2de4c7c88737da 522 Pfam PF02142 MGS-like domain 16 131 5.6E-28 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SCD_RS00195 647e2828715897c02c2de4c7c88737da 522 SMART SM00851 16 131 7.3E-61 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SCD_RS00195 647e2828715897c02c2de4c7c88737da 522 Gene3D G3DSA:3.40.140.20 246 366 6.2E-48 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SCD_RS00195 647e2828715897c02c2de4c7c88737da 522 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 6 522 2.8E-230 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SCD_RS00195 647e2828715897c02c2de4c7c88737da 522 PANTHER PTHR11692:SF2 2 522 0.0 T 22-04-2016 SCD_RS00195 647e2828715897c02c2de4c7c88737da 522 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 4 522 45.902 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SCD_RS00195 647e2828715897c02c2de4c7c88737da 522 Gene3D G3DSA:3.40.50.1380 2 189 3.1E-85 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SCD_RS10505 e6fb42d4681c15510b98b9afd86fd681 144 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 26 7.5E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS10505 e6fb42d4681c15510b98b9afd86fd681 144 PANTHER PTHR30093:SF4 6 63 2.8E-19 T 22-04-2016 SCD_RS10505 e6fb42d4681c15510b98b9afd86fd681 144 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 28 103 6.2E-12 T 22-04-2016 IPR031982 Type IV minor pilin ComP SCD_RS10505 e6fb42d4681c15510b98b9afd86fd681 144 SUPERFAMILY SSF54523 7 127 9.42E-23 T 22-04-2016 SCD_RS10505 e6fb42d4681c15510b98b9afd86fd681 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 8.7E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS10505 e6fb42d4681c15510b98b9afd86fd681 144 Gene3D G3DSA:3.30.700.10 7 74 2.9E-23 T 22-04-2016 SCD_RS10505 e6fb42d4681c15510b98b9afd86fd681 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 6 31 8.7E-9 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SCD_RS10505 e6fb42d4681c15510b98b9afd86fd681 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 42 60 8.7E-9 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SCD_RS10505 e6fb42d4681c15510b98b9afd86fd681 144 PANTHER PTHR30093 6 63 2.8E-19 T 22-04-2016 SCD_RS08655 0e1c16d536f1aafb3537a6febefc7211 267 PANTHER PTHR14969 28 240 2.7E-18 T 22-04-2016 SCD_RS08655 0e1c16d536f1aafb3537a6febefc7211 267 SMART SM00014 89 202 1.0E-14 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SCD_RS08655 0e1c16d536f1aafb3537a6febefc7211 267 Gene3D G3DSA:1.20.144.10 44 208 3.6E-25 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SCD_RS08655 0e1c16d536f1aafb3537a6febefc7211 267 SUPERFAMILY SSF48317 24 210 1.16E-29 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SCD_RS08655 0e1c16d536f1aafb3537a6febefc7211 267 Pfam PF01569 PAP2 superfamily 90 209 3.8E-21 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SCD_RS08635 cfebfbb94ebc5522add2f27aff850062 177 SUPERFAMILY SSF160443 90 173 1.83E-19 T 22-04-2016 IPR002625 Smr domain SCD_RS08635 cfebfbb94ebc5522add2f27aff850062 177 PANTHER PTHR35562 1 173 1.0E-42 T 22-04-2016 SCD_RS08635 cfebfbb94ebc5522add2f27aff850062 177 Pfam PF01713 Smr domain 92 173 3.3E-25 T 22-04-2016 IPR002625 Smr domain SCD_RS08635 cfebfbb94ebc5522add2f27aff850062 177 PANTHER PTHR35562:SF2 1 173 1.0E-42 T 22-04-2016 SCD_RS08635 cfebfbb94ebc5522add2f27aff850062 177 SMART SM00463 89 173 2.8E-17 T 22-04-2016 IPR002625 Smr domain SCD_RS04940 1f6b6e4f736ba7727168fab11b817244 151 Pfam PF12802 MarR family 36 97 6.8E-9 T 22-04-2016 SCD_RS04940 1f6b6e4f736ba7727168fab11b817244 151 SUPERFAMILY SSF46785 9 124 1.15E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS04940 1f6b6e4f736ba7727168fab11b817244 151 Gene3D G3DSA:1.10.10.10 7 121 1.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS04940 1f6b6e4f736ba7727168fab11b817244 151 PANTHER PTHR33164 17 124 2.5E-13 T 22-04-2016 SCD_RS04940 1f6b6e4f736ba7727168fab11b817244 151 SMART SM00347 30 130 5.5E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SCD_RS03485 6501f60296fb6fa8ed047c236957c076 485 PANTHER PTHR15184 9 477 1.5E-250 T 22-04-2016 SCD_RS03485 6501f60296fb6fa8ed047c236957c076 485 Hamap MF_01347 ATP synthase subunit beta [atpB]. 8 465 48.608 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS03485 6501f60296fb6fa8ed047c236957c076 485 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 10 463 2.0E-187 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS03485 6501f60296fb6fa8ed047c236957c076 485 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 13 77 9.2E-12 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS03485 6501f60296fb6fa8ed047c236957c076 485 SUPERFAMILY SSF47917 352 463 3.66E-42 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS03485 6501f60296fb6fa8ed047c236957c076 485 SUPERFAMILY SSF50615 7 79 1.54E-18 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS03485 6501f60296fb6fa8ed047c236957c076 485 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 134 347 1.0E-64 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS03485 6501f60296fb6fa8ed047c236957c076 485 Gene3D G3DSA:1.10.1140.10 352 463 3.5E-39 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS03485 6501f60296fb6fa8ed047c236957c076 485 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 338 347 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS03485 6501f60296fb6fa8ed047c236957c076 485 TIGRFAM TIGR03305 alt_F1F0_F1_bet: alternate F1F0 ATPase, F1 subunit beta 11 458 1.9E-269 T 22-04-2016 IPR017691 ATP synthase subunit beta, bacterial and archaeal GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS03485 6501f60296fb6fa8ed047c236957c076 485 Gene3D G3DSA:3.40.50.300 81 348 7.5E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03485 6501f60296fb6fa8ed047c236957c076 485 SUPERFAMILY SSF52540 81 351 8.18E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03485 6501f60296fb6fa8ed047c236957c076 485 PANTHER PTHR15184:SF8 9 477 1.5E-250 T 22-04-2016 SCD_RS03485 6501f60296fb6fa8ed047c236957c076 485 Gene3D G3DSA:2.40.10.170 4 79 8.6E-21 T 22-04-2016 SCD_RS03485 6501f60296fb6fa8ed047c236957c076 485 SMART SM00382 146 331 2.9E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS10930 8a977b57f86934d752448c423f117327 367 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 359 1.1E-91 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SCD_RS10930 8a977b57f86934d752448c423f117327 367 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 357 58.449 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SCD_RS10930 8a977b57f86934d752448c423f117327 367 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 361 1.2E-170 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SCD_RS10930 8a977b57f86934d752448c423f117327 367 SUPERFAMILY SSF51713 1 361 3.27E-165 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SCD_RS10930 8a977b57f86934d752448c423f117327 367 PANTHER PTHR21148:SF26 1 365 1.3E-176 T 22-04-2016 SCD_RS10930 8a977b57f86934d752448c423f117327 367 PANTHER PTHR21148 1 365 1.3E-176 T 22-04-2016 SCD_RS10930 8a977b57f86934d752448c423f117327 367 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 362 2.4E-164 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SCD_RS10930 8a977b57f86934d752448c423f117327 367 Gene3D G3DSA:3.20.20.105 1 362 7.9E-169 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SCD_RS02560 46d70b169f5c395c56c43372ed042663 304 Pfam PF13672 Protein phosphatase 2C 9 208 1.7E-16 T 22-04-2016 SCD_RS02560 46d70b169f5c395c56c43372ed042663 304 SMART SM00332 2 241 3.2E-9 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SCD_RS02560 46d70b169f5c395c56c43372ed042663 304 PANTHER PTHR13832 9 263 3.6E-38 T 22-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 SCD_RS02560 46d70b169f5c395c56c43372ed042663 304 SUPERFAMILY SSF81606 2 242 1.7E-56 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SCD_RS02560 46d70b169f5c395c56c43372ed042663 304 Gene3D G3DSA:3.60.40.10 2 242 1.8E-57 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SCD_RS02560 46d70b169f5c395c56c43372ed042663 304 PANTHER PTHR13832:SF226 9 263 3.6E-38 T 22-04-2016 SCD_RS02560 46d70b169f5c395c56c43372ed042663 304 SMART SM00331 7 243 1.8E-19 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SCD_RS07660 8a00c91843980ecbf65675e90600cfcf 858 PANTHER PTHR30001 1 845 1.9E-297 T 22-04-2016 SCD_RS07660 8a00c91843980ecbf65675e90600cfcf 858 Gene3D G3DSA:2.40.50.140 30 126 3.2E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS07660 8a00c91843980ecbf65675e90600cfcf 858 PANTHER PTHR30001:SF1 1 845 1.9E-297 T 22-04-2016 SCD_RS07660 8a00c91843980ecbf65675e90600cfcf 858 Hamap MF_00970 Ribonuclease E [rne]. 1 842 32.412 T 22-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 SCD_RS07660 8a00c91843980ecbf65675e90600cfcf 858 Pfam PF00575 S1 RNA binding domain 36 119 9.6E-11 T 22-04-2016 IPR003029 S1 domain GO:0003676 SCD_RS07660 8a00c91843980ecbf65675e90600cfcf 858 SMART SM00316 37 120 1.3E-9 T 22-04-2016 IPR022967 RNA-binding domain, S1 SCD_RS07660 8a00c91843980ecbf65675e90600cfcf 858 Pfam PF10150 Ribonuclease E/G family 122 391 1.3E-92 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 SCD_RS07660 8a00c91843980ecbf65675e90600cfcf 858 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 8.5E-160 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 SCD_RS07660 8a00c91843980ecbf65675e90600cfcf 858 SUPERFAMILY SSF50249 40 126 1.18E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS12600 b589267ee0100f820ed4a5330b65948a 412 SUPERFAMILY SSF50939 299 400 1.02E-21 T 22-04-2016 IPR011040 Sialidases SCD_RS12600 b589267ee0100f820ed4a5330b65948a 412 SUPERFAMILY SSF50939 74 250 1.02E-21 T 22-04-2016 IPR011040 Sialidases SCD_RS12600 b589267ee0100f820ed4a5330b65948a 412 Gene3D G3DSA:2.120.10.10 282 392 5.2E-9 T 22-04-2016 IPR011040 Sialidases SCD_RS12600 b589267ee0100f820ed4a5330b65948a 412 Gene3D G3DSA:2.120.10.10 65 249 3.8E-14 T 22-04-2016 IPR011040 Sialidases SCD_RS01630 f4c46f89e1143db86af2963df0c0f8fa 296 Hamap MF_00082_A Acetylglutamate kinase [argB]. 29 279 29.898 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SCD_RS01630 f4c46f89e1143db86af2963df0c0f8fa 296 SUPERFAMILY SSF53633 9 294 6.15E-93 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SCD_RS01630 f4c46f89e1143db86af2963df0c0f8fa 296 PANTHER PTHR23342 10 293 2.0E-116 T 22-04-2016 SCD_RS01630 f4c46f89e1143db86af2963df0c0f8fa 296 TIGRFAM TIGR00761 argB: acetylglutamate kinase 29 269 3.2E-77 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SCD_RS01630 f4c46f89e1143db86af2963df0c0f8fa 296 Pfam PF00696 Amino acid kinase family 28 271 2.1E-44 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SCD_RS01630 f4c46f89e1143db86af2963df0c0f8fa 296 PIRSF PIRSF000728 11 294 2.2E-108 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SCD_RS01630 f4c46f89e1143db86af2963df0c0f8fa 296 Hamap MF_00082_B Acetylglutamate kinase [argB]. 26 294 37.096 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SCD_RS01630 f4c46f89e1143db86af2963df0c0f8fa 296 Gene3D G3DSA:3.40.1160.10 27 293 5.7E-104 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SCD_RS01630 f4c46f89e1143db86af2963df0c0f8fa 296 PRINTS PR00474 Glutamate 5-kinase family signature 59 73 1.7E-6 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SCD_RS01630 f4c46f89e1143db86af2963df0c0f8fa 296 PRINTS PR00474 Glutamate 5-kinase family signature 244 264 1.7E-6 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SCD_RS01630 f4c46f89e1143db86af2963df0c0f8fa 296 PRINTS PR00474 Glutamate 5-kinase family signature 194 221 1.7E-6 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SCD_RS11255 a32985a358381e5a66c8fe78c32f0eb5 147 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 10 89 2.9E-24 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS11255 a32985a358381e5a66c8fe78c32f0eb5 147 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 9 126 4.8E-29 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS11255 a32985a358381e5a66c8fe78c32f0eb5 147 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 15 93 2.0E-20 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS11255 a32985a358381e5a66c8fe78c32f0eb5 147 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 8 143 17.355 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS11255 a32985a358381e5a66c8fe78c32f0eb5 147 Gene3D G3DSA:2.60.15.10 9 93 5.5E-24 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS11255 a32985a358381e5a66c8fe78c32f0eb5 147 PANTHER PTHR13822 6 126 4.4E-21 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS11255 a32985a358381e5a66c8fe78c32f0eb5 147 SUPERFAMILY SSF51344 9 91 1.31E-21 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS01010 4527542a3ce735b6749287cc930749c7 676 PANTHER PTHR11804:SF8 2 673 2.3E-295 T 22-04-2016 SCD_RS01010 4527542a3ce735b6749287cc930749c7 676 Gene3D G3DSA:3.40.390.10 357 499 1.5E-53 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SCD_RS01010 4527542a3ce735b6749287cc930749c7 676 Gene3D G3DSA:1.20.1050.40 10 137 6.2E-23 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal SCD_RS01010 4527542a3ce735b6749287cc930749c7 676 PANTHER PTHR11804 2 673 2.3E-295 T 22-04-2016 SCD_RS01010 4527542a3ce735b6749287cc930749c7 676 Gene3D G3DSA:1.10.1370.10 500 673 1.5E-138 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 SCD_RS01010 4527542a3ce735b6749287cc930749c7 676 Gene3D G3DSA:1.10.1370.10 140 346 1.5E-138 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 SCD_RS01010 4527542a3ce735b6749287cc930749c7 676 Pfam PF01432 Peptidase family M3 221 672 8.0E-143 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 SCD_RS01010 4527542a3ce735b6749287cc930749c7 676 SUPERFAMILY SSF55486 2 672 2.51E-194 T 22-04-2016 SCD_RS06010 35e5db606e991b40ae9a39759dd235b7 248 PANTHER PTHR30035:SF3 26 234 3.3E-67 T 22-04-2016 SCD_RS06010 35e5db606e991b40ae9a39759dd235b7 248 PRINTS PR01805 VacJ lipoprotein signature 46 62 1.8E-26 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SCD_RS06010 35e5db606e991b40ae9a39759dd235b7 248 PRINTS PR01805 VacJ lipoprotein signature 97 114 1.8E-26 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SCD_RS06010 35e5db606e991b40ae9a39759dd235b7 248 PRINTS PR01805 VacJ lipoprotein signature 133 150 1.8E-26 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SCD_RS06010 35e5db606e991b40ae9a39759dd235b7 248 PRINTS PR01805 VacJ lipoprotein signature 29 42 1.8E-26 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SCD_RS06010 35e5db606e991b40ae9a39759dd235b7 248 Pfam PF04333 MlaA lipoprotein 28 219 2.0E-81 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SCD_RS06010 35e5db606e991b40ae9a39759dd235b7 248 PANTHER PTHR30035 26 234 3.3E-67 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SCD_RS00050 02fe71fbb5825218ba3c4d7d3390a43d 167 Gene3D G3DSA:3.90.45.10 5 164 2.5E-63 T 22-04-2016 IPR023635 Peptide deformylase SCD_RS00050 02fe71fbb5825218ba3c4d7d3390a43d 167 SUPERFAMILY SSF56420 2 163 9.55E-61 T 22-04-2016 IPR023635 Peptide deformylase SCD_RS00050 02fe71fbb5825218ba3c4d7d3390a43d 167 PANTHER PTHR10458:SF10 1 165 8.3E-85 T 22-04-2016 SCD_RS00050 02fe71fbb5825218ba3c4d7d3390a43d 167 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 5.5E-57 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SCD_RS00050 02fe71fbb5825218ba3c4d7d3390a43d 167 Pfam PF01327 Polypeptide deformylase 4 151 1.7E-51 T 22-04-2016 IPR023635 Peptide deformylase SCD_RS00050 02fe71fbb5825218ba3c4d7d3390a43d 167 PIRSF PIRSF004749 1 167 7.0E-55 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SCD_RS00050 02fe71fbb5825218ba3c4d7d3390a43d 167 PRINTS PR01576 Peptide deformylase signature 33 62 8.4E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SCD_RS00050 02fe71fbb5825218ba3c4d7d3390a43d 167 PRINTS PR01576 Peptide deformylase signature 120 149 8.4E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SCD_RS00050 02fe71fbb5825218ba3c4d7d3390a43d 167 PRINTS PR01576 Peptide deformylase signature 101 119 8.4E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SCD_RS00050 02fe71fbb5825218ba3c4d7d3390a43d 167 PRINTS PR01576 Peptide deformylase signature 89 100 8.4E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SCD_RS00050 02fe71fbb5825218ba3c4d7d3390a43d 167 Hamap MF_00163 Peptide deformylase [def]. 2 162 29.647 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SCD_RS00050 02fe71fbb5825218ba3c4d7d3390a43d 167 PANTHER PTHR10458 1 165 8.3E-85 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SCD_RS07595 bc84646de12f6dfa06c18e79b3d75051 309 Gene3D G3DSA:3.30.70.250 124 194 1.2E-30 T 22-04-2016 SCD_RS07595 bc84646de12f6dfa06c18e79b3d75051 309 Gene3D G3DSA:3.40.366.10 195 304 1.5E-62 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SCD_RS07595 bc84646de12f6dfa06c18e79b3d75051 309 Gene3D G3DSA:3.40.366.10 3 120 1.5E-62 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SCD_RS07595 bc84646de12f6dfa06c18e79b3d75051 309 SUPERFAMILY SSF55048 128 195 1.22E-16 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 SCD_RS07595 bc84646de12f6dfa06c18e79b3d75051 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 289 3.5E-104 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 SCD_RS07595 bc84646de12f6dfa06c18e79b3d75051 309 PIRSF PIRSF000446 1 309 1.9E-109 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 SCD_RS07595 bc84646de12f6dfa06c18e79b3d75051 309 PANTHER PTHR10982 1 287 6.4E-131 T 22-04-2016 SCD_RS07595 bc84646de12f6dfa06c18e79b3d75051 309 SUPERFAMILY SSF52151 3 120 1.12E-72 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SCD_RS07595 bc84646de12f6dfa06c18e79b3d75051 309 SUPERFAMILY SSF52151 188 306 1.12E-72 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SCD_RS07595 bc84646de12f6dfa06c18e79b3d75051 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 305 1.5E-26 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain SCD_RS07595 bc84646de12f6dfa06c18e79b3d75051 309 Pfam PF00698 Acyl transferase domain 5 265 2.7E-29 T 22-04-2016 IPR014043 Acyl transferase SCD_RS02660 798f2c75480de3b7caac4909e4ce9809 340 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 263 1.3E-107 T 22-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 SCD_RS02660 798f2c75480de3b7caac4909e4ce9809 340 Pfam PF14815 NUDIX domain 232 337 1.8E-21 T 22-04-2016 IPR029119 MutY, C-terminal SCD_RS02660 798f2c75480de3b7caac4909e4ce9809 340 SMART SM00478 37 188 4.1E-44 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SCD_RS02660 798f2c75480de3b7caac4909e4ce9809 340 PANTHER PTHR10359 2 298 8.6E-85 T 22-04-2016 SCD_RS02660 798f2c75480de3b7caac4909e4ce9809 340 Gene3D G3DSA:1.10.340.30 20 120 8.7E-43 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SCD_RS02660 798f2c75480de3b7caac4909e4ce9809 340 SUPERFAMILY SSF55811 217 339 2.78E-24 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SCD_RS02660 798f2c75480de3b7caac4909e4ce9809 340 Gene3D G3DSA:3.90.79.10 226 339 6.8E-19 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SCD_RS02660 798f2c75480de3b7caac4909e4ce9809 340 SUPERFAMILY SSF48150 2 221 8.01E-71 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SCD_RS02660 798f2c75480de3b7caac4909e4ce9809 340 Pfam PF00633 Helix-hairpin-helix motif 98 126 6.3E-7 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 SCD_RS02660 798f2c75480de3b7caac4909e4ce9809 340 SMART SM00525 189 208 0.0095 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 SCD_RS02660 798f2c75480de3b7caac4909e4ce9809 340 Gene3D G3DSA:1.10.1670.10 121 220 4.3E-38 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SCD_RS02660 798f2c75480de3b7caac4909e4ce9809 340 ProSitePatterns PS01155 Endonuclease III family signature. 100 129 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 SCD_RS02660 798f2c75480de3b7caac4909e4ce9809 340 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 163 4.3E-16 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SCD_RS10825 ce02d2e818836f2d30c9be4e45f19ff7 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 26.383 T 22-04-2016 IPR007551 Protein of unknown function DUF520 SCD_RS10825 ce02d2e818836f2d30c9be4e45f19ff7 161 Gene3D G3DSA:3.30.70.860 95 161 2.4E-32 T 22-04-2016 SCD_RS10825 ce02d2e818836f2d30c9be4e45f19ff7 161 PANTHER PTHR30476 1 161 2.0E-67 T 22-04-2016 SCD_RS10825 ce02d2e818836f2d30c9be4e45f19ff7 161 SUPERFAMILY SSF89963 2 87 9.68E-26 T 22-04-2016 IPR007551 Protein of unknown function DUF520 SCD_RS10825 ce02d2e818836f2d30c9be4e45f19ff7 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 2.6E-61 T 22-04-2016 IPR007551 Protein of unknown function DUF520 SCD_RS10825 ce02d2e818836f2d30c9be4e45f19ff7 161 SUPERFAMILY SSF89963 89 161 7.59E-27 T 22-04-2016 IPR007551 Protein of unknown function DUF520 SCD_RS10825 ce02d2e818836f2d30c9be4e45f19ff7 161 PANTHER PTHR30476:SF0 1 161 2.0E-67 T 22-04-2016 SCD_RS10825 ce02d2e818836f2d30c9be4e45f19ff7 161 Gene3D G3DSA:3.30.70.990 9 94 4.1E-27 T 22-04-2016 SCD_RS06415 95313b851ae7c4f4ab0bd6dc1404205c 599 Gene3D G3DSA:3.40.1440.10 15 94 3.1E-7 T 22-04-2016 IPR027299 GIY-YIG domain SCD_RS06415 95313b851ae7c4f4ab0bd6dc1404205c 599 SUPERFAMILY SSF46600 187 239 3.66E-11 T 22-04-2016 IPR001943 UVR domain GO:0005515 SCD_RS06415 95313b851ae7c4f4ab0bd6dc1404205c 599 Gene3D G3DSA:1.10.150.20 545 599 3.4E-21 T 22-04-2016 SCD_RS06415 95313b851ae7c4f4ab0bd6dc1404205c 599 PANTHER PTHR30562:SF1 7 598 1.5E-251 T 22-04-2016 SCD_RS06415 95313b851ae7c4f4ab0bd6dc1404205c 599 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 597 27.924 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 SCD_RS06415 95313b851ae7c4f4ab0bd6dc1404205c 599 Pfam PF01541 GIY-YIG catalytic domain 16 90 5.6E-10 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SCD_RS06415 95313b851ae7c4f4ab0bd6dc1404205c 599 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 8 579 4.9E-185 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 SCD_RS06415 95313b851ae7c4f4ab0bd6dc1404205c 599 SUPERFAMILY SSF47781 496 599 1.46E-23 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SCD_RS06415 95313b851ae7c4f4ab0bd6dc1404205c 599 Gene3D G3DSA:4.10.860.10 182 239 4.5E-15 T 22-04-2016 IPR001943 UVR domain GO:0005515 SCD_RS06415 95313b851ae7c4f4ab0bd6dc1404205c 599 Pfam PF14520 Helix-hairpin-helix domain 547 598 3.6E-6 T 22-04-2016 SCD_RS06415 95313b851ae7c4f4ab0bd6dc1404205c 599 Pfam PF02151 UvrB/uvrC motif 201 234 5.3E-8 T 22-04-2016 IPR001943 UVR domain GO:0005515 SCD_RS06415 95313b851ae7c4f4ab0bd6dc1404205c 599 SMART SM00465 14 95 7.9E-19 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SCD_RS06415 95313b851ae7c4f4ab0bd6dc1404205c 599 PANTHER PTHR30562 7 598 1.5E-251 T 22-04-2016 SCD_RS06415 95313b851ae7c4f4ab0bd6dc1404205c 599 SUPERFAMILY SSF82771 14 97 4.32E-22 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SCD_RS06415 95313b851ae7c4f4ab0bd6dc1404205c 599 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 377 532 8.6E-49 T 22-04-2016 IPR001162 UvrC family homology region SCD_RS12060 87fdde4c95954687d80137b82f6165a2 203 PANTHER PTHR30462:SF3 7 176 1.6E-27 T 22-04-2016 SCD_RS12060 87fdde4c95954687d80137b82f6165a2 203 Pfam PF04403 Paraquat-inducible protein A 46 199 5.0E-49 T 22-04-2016 IPR007498 Paraquat-inducible protein A SCD_RS12060 87fdde4c95954687d80137b82f6165a2 203 PANTHER PTHR30462 7 176 1.6E-27 T 22-04-2016 SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 SUPERFAMILY SSF55785 127 253 9.42E-17 T 22-04-2016 IPR000014 PAS domain SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 PANTHER PTHR10799:SF774 372 396 5.1E-92 T 22-04-2016 SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 PANTHER PTHR10799:SF774 47 67 5.1E-92 T 22-04-2016 SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 PANTHER PTHR10799:SF774 417 808 5.1E-92 T 22-04-2016 SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 SUPERFAMILY SSF55785 304 412 2.27E-10 T 22-04-2016 IPR000014 PAS domain SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 Pfam PF00072 Response regulator receiver domain 3 112 7.7E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 534 697 5.2E-47 T 22-04-2016 IPR000160 GGDEF domain SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 Pfam PF13426 PAS domain 423 525 4.6E-14 T 22-04-2016 IPR000014 PAS domain SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 PANTHER PTHR10799 372 396 5.1E-92 T 22-04-2016 SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 PANTHER PTHR10799 47 67 5.1E-92 T 22-04-2016 SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 PANTHER PTHR10799 417 808 5.1E-92 T 22-04-2016 SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 Pfam PF00990 Diguanylate cyclase, GGDEF domain 537 694 1.4E-50 T 22-04-2016 IPR000160 GGDEF domain SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 416 532 5.5E-20 T 22-04-2016 IPR000014 PAS domain SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 295 411 6.0E-10 T 22-04-2016 IPR000014 PAS domain SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 139 261 1.2E-8 T 22-04-2016 IPR000014 PAS domain SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 Gene3D G3DSA:3.40.50.2300 1 121 1.6E-31 T 22-04-2016 SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 Gene3D G3DSA:3.30.450.20 127 233 1.1E-11 T 22-04-2016 SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 Gene3D G3DSA:3.30.450.20 402 520 4.4E-28 T 22-04-2016 SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 SMART SM00091 412 478 9.4E-9 T 22-04-2016 IPR000014 PAS domain SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 SMART SM00091 292 357 0.39 T 22-04-2016 IPR000014 PAS domain SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 SMART SM00086 213 255 3.9 T 22-04-2016 IPR001610 PAC motif SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 SMART SM00086 484 526 0.0041 T 22-04-2016 IPR001610 PAC motif SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 Gene3D G3DSA:3.30.450.20 234 277 5.7E-6 T 22-04-2016 SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 SMART SM00267 526 698 3.4E-68 T 22-04-2016 IPR000160 GGDEF domain SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 SMART SM00448 1 114 3.1E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 Pfam PF08448 PAS fold 146 257 3.1E-12 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 Gene3D G3DSA:3.30.450.20 284 401 2.4E-11 T 22-04-2016 SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 Pfam PF13188 PAS domain 296 349 0.043 T 22-04-2016 IPR000014 PAS domain SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 Pfam PF00563 EAL domain 715 948 1.3E-66 T 22-04-2016 IPR001633 EAL domain SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 Gene3D G3DSA:3.30.70.270 538 706 7.7E-61 T 22-04-2016 SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 Gene3D G3DSA:3.20.20.450 711 960 2.0E-90 T 22-04-2016 IPR001633 EAL domain SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 SUPERFAMILY SSF141868 715 959 2.62E-81 T 22-04-2016 IPR001633 EAL domain SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 SUPERFAMILY SSF52172 2 122 8.68E-31 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 SMART SM00052 708 953 1.4E-103 T 22-04-2016 IPR001633 EAL domain SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 SUPERFAMILY SSF55073 542 700 2.12E-50 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS07000 4542e7b79bc2c8208c929c2524199817 978 SUPERFAMILY SSF55785 420 523 4.01E-28 T 22-04-2016 IPR000014 PAS domain SCD_RS13295 3b825869e0370c36084b8362ea7c0e26 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 194 218 1.8E-39 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SCD_RS13295 3b825869e0370c36084b8362ea7c0e26 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 54 81 1.8E-39 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SCD_RS13295 3b825869e0370c36084b8362ea7c0e26 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 129 149 1.8E-39 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SCD_RS13295 3b825869e0370c36084b8362ea7c0e26 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 169 193 1.8E-39 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SCD_RS13295 3b825869e0370c36084b8362ea7c0e26 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 1.8E-39 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SCD_RS13295 3b825869e0370c36084b8362ea7c0e26 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 234 251 1.8E-39 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SCD_RS13295 3b825869e0370c36084b8362ea7c0e26 327 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 318 37.619 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SCD_RS13295 3b825869e0370c36084b8362ea7c0e26 327 PANTHER PTHR11728 1 327 2.4E-127 T 22-04-2016 SCD_RS13295 3b825869e0370c36084b8362ea7c0e26 327 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2 156 4.8E-47 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SCD_RS13295 3b825869e0370c36084b8362ea7c0e26 327 Gene3D G3DSA:3.40.50.720 1 179 6.6E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS13295 3b825869e0370c36084b8362ea7c0e26 327 Gene3D G3DSA:1.10.1040.10 180 322 2.2E-57 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SCD_RS13295 3b825869e0370c36084b8362ea7c0e26 327 PIRSF PIRSF000114 1 327 2.5E-104 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SCD_RS13295 3b825869e0370c36084b8362ea7c0e26 327 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 176 316 8.5E-53 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SCD_RS13295 3b825869e0370c36084b8362ea7c0e26 327 SUPERFAMILY SSF51735 1 176 1.11E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS13295 3b825869e0370c36084b8362ea7c0e26 327 SUPERFAMILY SSF48179 176 327 2.31E-57 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SCD_RS13295 3b825869e0370c36084b8362ea7c0e26 327 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 184 205 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SCD_RS01830 53d47f42ea5e3f4267c102b5fcdf8679 113 PANTHER PTHR36507 15 113 1.1E-19 T 22-04-2016 SCD_RS01830 53d47f42ea5e3f4267c102b5fcdf8679 113 PRINTS PR00155 Amicyanin family signature 80 95 3.2E-11 T 22-04-2016 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 SCD_RS01830 53d47f42ea5e3f4267c102b5fcdf8679 113 PRINTS PR00155 Amicyanin family signature 96 111 3.2E-11 T 22-04-2016 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 SCD_RS01830 53d47f42ea5e3f4267c102b5fcdf8679 113 PRINTS PR00155 Amicyanin family signature 40 59 3.2E-11 T 22-04-2016 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 SCD_RS01830 53d47f42ea5e3f4267c102b5fcdf8679 113 Gene3D G3DSA:2.60.40.420 15 111 3.6E-25 T 22-04-2016 IPR008972 Cupredoxin SCD_RS01830 53d47f42ea5e3f4267c102b5fcdf8679 113 PANTHER PTHR36507:SF1 15 113 1.1E-19 T 22-04-2016 SCD_RS01830 53d47f42ea5e3f4267c102b5fcdf8679 113 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 31 111 5.9E-13 T 22-04-2016 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 SCD_RS01830 53d47f42ea5e3f4267c102b5fcdf8679 113 SUPERFAMILY SSF49503 29 112 1.63E-23 T 22-04-2016 IPR008972 Cupredoxin SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 512 518 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 Pfam PF00122 E1-E2 ATPase 283 501 2.3E-54 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 7 90 2.1E-27 T 22-04-2016 IPR021993 Putative metal-binding domain of cation transport ATPase SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 Gene3D G3DSA:3.40.50.1000 620 769 1.3E-49 T 22-04-2016 IPR023214 HAD-like domain SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 Gene3D G3DSA:3.40.50.1000 487 524 1.3E-49 T 22-04-2016 IPR023214 HAD-like domain SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 PRINTS PR00942 Copper-transporting ATPase 1 signature 119 140 5.6E-7 T 22-04-2016 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 PRINTS PR00942 Copper-transporting ATPase 1 signature 213 233 5.6E-7 T 22-04-2016 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 PRINTS PR00942 Copper-transporting ATPase 1 signature 233 258 5.6E-7 T 22-04-2016 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 PANTHER PTHR24093:SF50 83 803 2.2E-181 T 22-04-2016 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 Gene3D G3DSA:3.30.70.100 93 164 1.5E-18 T 22-04-2016 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 SUPERFAMILY SSF81665 413 504 7.72E-10 T 22-04-2016 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 SUPERFAMILY SSF81665 749 778 7.72E-10 T 22-04-2016 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 SUPERFAMILY SSF81665 274 312 7.72E-10 T 22-04-2016 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 SUPERFAMILY SSF55008 92 166 2.09E-18 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 Pfam PF00403 Heavy-metal-associated domain 100 158 3.7E-10 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 283 802 5.1E-112 T 22-04-2016 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 250 802 4.7E-162 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 SUPERFAMILY SSF56784 565 800 2.18E-53 T 22-04-2016 IPR023214 HAD-like domain SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 SUPERFAMILY SSF56784 509 528 2.18E-53 T 22-04-2016 IPR023214 HAD-like domain SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 700 719 1.5E-22 T 22-04-2016 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 362 376 1.5E-22 T 22-04-2016 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 647 657 1.5E-22 T 22-04-2016 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 723 735 1.5E-22 T 22-04-2016 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 510 524 1.5E-22 T 22-04-2016 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 PANTHER PTHR24093 83 803 2.2E-181 T 22-04-2016 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 PRINTS PR00943 Copper-transporting ATPase signature 677 694 5.9E-9 T 22-04-2016 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 PRINTS PR00943 Copper-transporting ATPase signature 235 254 5.9E-9 T 22-04-2016 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 PRINTS PR00943 Copper-transporting ATPase signature 140 160 5.9E-9 T 22-04-2016 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 PRINTS PR00943 Copper-transporting ATPase signature 301 319 5.9E-9 T 22-04-2016 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 Gene3D G3DSA:2.70.150.10 279 412 1.1E-25 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 Pfam PF00702 haloacid dehalogenase-like hydrolase 506 714 1.2E-35 T 22-04-2016 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 285 532 5.4E-32 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 610 779 4.5E-39 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 232 803 1.1E-151 T 22-04-2016 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 ProSitePatterns PS01229 Hypothetical cof family signature 2. 700 722 - T 22-04-2016 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 SUPERFAMILY SSF81653 318 411 6.54E-23 T 22-04-2016 SCD_RS13075 c955dc678e36ec3f3c58da7396588815 803 Gene3D G3DSA:3.40.1110.10 525 596 2.9E-5 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SCD_RS15660 ed24079d1a795222e2238adc41ff7cb6 287 SMART SM00471 109 244 2.5E-10 T 22-04-2016 IPR003607 HD/PDEase domain SCD_RS15660 ed24079d1a795222e2238adc41ff7cb6 287 Pfam PF13487 HD domain 164 226 2.7E-20 T 22-04-2016 SCD_RS15660 ed24079d1a795222e2238adc41ff7cb6 287 SUPERFAMILY SSF109604 108 270 3.45E-38 T 22-04-2016 SCD_RS15660 ed24079d1a795222e2238adc41ff7cb6 287 Gene3D G3DSA:1.10.3210.10 103 271 4.2E-22 T 22-04-2016 IPR006674 HD domain SCD_RS03300 7f10fcc8d82f63e05ed65a672547a968 598 Gene3D G3DSA:3.30.1360.30 277 413 1.2E-45 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 SCD_RS03300 7f10fcc8d82f63e05ed65a672547a968 598 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 584 6.3E-251 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SCD_RS03300 7f10fcc8d82f63e05ed65a672547a968 598 Pfam PF02938 GAD domain 308 407 1.4E-25 T 22-04-2016 IPR029351 GAD domain SCD_RS03300 7f10fcc8d82f63e05ed65a672547a968 598 SUPERFAMILY SSF55681 111 292 1.08E-105 T 22-04-2016 SCD_RS03300 7f10fcc8d82f63e05ed65a672547a968 598 SUPERFAMILY SSF55681 425 586 1.08E-105 T 22-04-2016 SCD_RS03300 7f10fcc8d82f63e05ed65a672547a968 598 PANTHER PTHR22594:SF5 1 297 9.7E-254 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SCD_RS03300 7f10fcc8d82f63e05ed65a672547a968 598 PANTHER PTHR22594:SF5 371 572 9.7E-254 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SCD_RS03300 7f10fcc8d82f63e05ed65a672547a968 598 Gene3D G3DSA:2.40.50.140 1 106 2.8E-40 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS03300 7f10fcc8d82f63e05ed65a672547a968 598 SUPERFAMILY SSF50249 1 105 9.9E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS03300 7f10fcc8d82f63e05ed65a672547a968 598 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 4.6E-18 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SCD_RS03300 7f10fcc8d82f63e05ed65a672547a968 598 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 564 36.882 T 22-04-2016 SCD_RS03300 7f10fcc8d82f63e05ed65a672547a968 598 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 559 5.4E-108 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS03300 7f10fcc8d82f63e05ed65a672547a968 598 PANTHER PTHR22594 1 297 9.7E-254 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS03300 7f10fcc8d82f63e05ed65a672547a968 598 PANTHER PTHR22594 371 572 9.7E-254 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS03300 7f10fcc8d82f63e05ed65a672547a968 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 191 203 2.6E-25 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS03300 7f10fcc8d82f63e05ed65a672547a968 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 221 2.6E-25 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS03300 7f10fcc8d82f63e05ed65a672547a968 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 2.6E-25 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS03300 7f10fcc8d82f63e05ed65a672547a968 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 2.6E-25 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS03300 7f10fcc8d82f63e05ed65a672547a968 598 SUPERFAMILY SSF55261 291 419 4.91E-41 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 SCD_RS03300 7f10fcc8d82f63e05ed65a672547a968 598 Gene3D G3DSA:3.30.930.10 414 586 5.7E-115 T 22-04-2016 SCD_RS03300 7f10fcc8d82f63e05ed65a672547a968 598 Gene3D G3DSA:3.30.930.10 132 276 5.7E-115 T 22-04-2016 SCD_RS11150 af4f2199c8a9e159ec5fad7236f3369e 77 SMART SM00418 2 64 8.4E-10 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SCD_RS11150 af4f2199c8a9e159ec5fad7236f3369e 77 Pfam PF12840 Helix-turn-helix domain 6 43 2.4E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS11150 af4f2199c8a9e159ec5fad7236f3369e 77 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 20 35 4.4E-6 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SCD_RS11150 af4f2199c8a9e159ec5fad7236f3369e 77 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 35 50 4.4E-6 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SCD_RS11150 af4f2199c8a9e159ec5fad7236f3369e 77 SUPERFAMILY SSF46785 7 65 6.21E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS11150 af4f2199c8a9e159ec5fad7236f3369e 77 PANTHER PTHR33154 8 76 4.0E-16 T 22-04-2016 SCD_RS11150 af4f2199c8a9e159ec5fad7236f3369e 77 Gene3D G3DSA:1.10.10.10 8 67 1.4E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS08905 4dd7fbc9f0bf8f3a6eaa58f9d033895a 288 SUPERFAMILY SSF117892 52 190 4.84E-31 T 22-04-2016 IPR001107 Band 7 domain SCD_RS08905 4dd7fbc9f0bf8f3a6eaa58f9d033895a 288 TIGRFAM TIGR01932 hflC: HflC protein 142 284 6.2E-51 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 SCD_RS08905 4dd7fbc9f0bf8f3a6eaa58f9d033895a 288 PANTHER PTHR10264:SF80 1 286 1.1E-88 T 22-04-2016 SCD_RS08905 4dd7fbc9f0bf8f3a6eaa58f9d033895a 288 PIRSF PIRSF005651 1 288 2.3E-96 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 SCD_RS08905 4dd7fbc9f0bf8f3a6eaa58f9d033895a 288 PRINTS PR00721 Stomatin signature 160 178 2.8E-8 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SCD_RS08905 4dd7fbc9f0bf8f3a6eaa58f9d033895a 288 PRINTS PR00721 Stomatin signature 179 200 2.8E-8 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SCD_RS08905 4dd7fbc9f0bf8f3a6eaa58f9d033895a 288 PRINTS PR00721 Stomatin signature 27 49 2.8E-8 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SCD_RS08905 4dd7fbc9f0bf8f3a6eaa58f9d033895a 288 PRINTS PR00721 Stomatin signature 76 97 2.8E-8 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SCD_RS08905 4dd7fbc9f0bf8f3a6eaa58f9d033895a 288 Pfam PF01145 SPFH domain / Band 7 family 24 197 7.0E-28 T 22-04-2016 IPR001107 Band 7 domain SCD_RS08905 4dd7fbc9f0bf8f3a6eaa58f9d033895a 288 PANTHER PTHR10264 1 286 1.1E-88 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SCD_RS08905 4dd7fbc9f0bf8f3a6eaa58f9d033895a 288 SMART SM00244 20 184 1.9E-33 T 22-04-2016 IPR001107 Band 7 domain SCD_RS09340 f6cd404f323f53bd267e66f25657b47b 419 Gene3D G3DSA:3.40.50.450 3 238 1.4E-49 T 22-04-2016 SCD_RS09340 f6cd404f323f53bd267e66f25657b47b 419 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 179 195 3.0E-8 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS09340 f6cd404f323f53bd267e66f25657b47b 419 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 8 27 3.0E-8 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS09340 f6cd404f323f53bd267e66f25657b47b 419 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 237 249 3.0E-8 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS09340 f6cd404f323f53bd267e66f25657b47b 419 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 137 154 3.0E-8 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS09340 f6cd404f323f53bd267e66f25657b47b 419 PANTHER PTHR13697 92 377 9.3E-135 T 22-04-2016 SCD_RS09340 f6cd404f323f53bd267e66f25657b47b 419 Pfam PF00365 Phosphofructokinase 10 289 5.3E-43 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS09340 f6cd404f323f53bd267e66f25657b47b 419 SUPERFAMILY SSF53784 3 414 3.53E-105 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS09340 f6cd404f323f53bd267e66f25657b47b 419 PIRSF PIRSF036483 2 418 2.1E-209 T 22-04-2016 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042|UniPathway: UPA00109 SCD_RS09340 f6cd404f323f53bd267e66f25657b47b 419 PANTHER PTHR13697:SF19 92 377 9.3E-135 T 22-04-2016 SCD_RS09340 f6cd404f323f53bd267e66f25657b47b 419 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 3 399 43.562 T 22-04-2016 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042|UniPathway: UPA00109 SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 Gene3D G3DSA:1.10.730.10 377 532 1.5E-42 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 PANTHER PTHR11946 2 635 2.6E-230 T 22-04-2016 SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 Pfam PF09334 tRNA synthetases class I (M) 5 393 3.5E-153 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 Gene3D G3DSA:2.20.28.20 143 174 1.2E-18 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 Gene3D G3DSA:3.40.50.620 2 142 3.6E-90 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 Gene3D G3DSA:3.40.50.620 181 376 3.6E-90 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 5 532 2.4E-172 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 Pfam PF01588 Putative tRNA binding domain 584 676 1.6E-23 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 542 679 4.3E-44 T 22-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 381 392 4.0E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 4.0E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 4.0E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 288 303 4.0E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 4.0E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 249 260 4.0E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 Hamap MF_00098 Methionine--tRNA ligase [metG]. 3 543 39.998 T 22-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 SUPERFAMILY SSF57770 140 174 4.71E-12 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 SUPERFAMILY SSF50249 577 678 9.3E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 SUPERFAMILY SSF52374 174 383 2.11E-100 T 22-04-2016 SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 SUPERFAMILY SSF52374 2 139 2.11E-100 T 22-04-2016 SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 SUPERFAMILY SSF47323 383 592 5.42E-43 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 Gene3D G3DSA:2.40.50.140 571 679 5.2E-43 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 Pfam PF08264 Anticodon-binding domain of tRNA 410 496 6.5E-6 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SCD_RS09255 5c06c1a5c0d772a8d3835eef7ad7d71a 679 PANTHER PTHR11946:SF86 2 635 2.6E-230 T 22-04-2016 SCD_RS14765 e748b8c78c8d96362c4898ab0aa2cfe9 415 PANTHER PTHR24220:SF117 43 241 6.6E-99 T 22-04-2016 SCD_RS14765 e748b8c78c8d96362c4898ab0aa2cfe9 415 PANTHER PTHR24220:SF117 5 15 6.6E-99 T 22-04-2016 SCD_RS14765 e748b8c78c8d96362c4898ab0aa2cfe9 415 SMART SM00382 55 230 1.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS14765 e748b8c78c8d96362c4898ab0aa2cfe9 415 SUPERFAMILY SSF52540 42 238 1.07E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14765 e748b8c78c8d96362c4898ab0aa2cfe9 415 Gene3D G3DSA:3.40.50.300 1 240 2.1E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14765 e748b8c78c8d96362c4898ab0aa2cfe9 415 Pfam PF00005 ABC transporter 46 177 1.1E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS14765 e748b8c78c8d96362c4898ab0aa2cfe9 415 Gene3D G3DSA:2.70.50.60 265 366 5.2E-8 T 22-04-2016 SCD_RS14765 e748b8c78c8d96362c4898ab0aa2cfe9 415 Pfam PF14524 Wzt C-terminal domain 263 383 1.7E-12 T 22-04-2016 IPR029439 Wzt, C-terminal SCD_RS14765 e748b8c78c8d96362c4898ab0aa2cfe9 415 PANTHER PTHR24220 43 241 6.6E-99 T 22-04-2016 SCD_RS14765 e748b8c78c8d96362c4898ab0aa2cfe9 415 PANTHER PTHR24220 5 15 6.6E-99 T 22-04-2016 SCD_RS14765 e748b8c78c8d96362c4898ab0aa2cfe9 415 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS11645 5cd48b5f8a5cf68a37085a25950fdd12 67 SUPERFAMILY SSF50249 1 65 1.69E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS11645 5cd48b5f8a5cf68a37085a25950fdd12 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 2.8E-32 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SCD_RS11645 5cd48b5f8a5cf68a37085a25950fdd12 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site SCD_RS11645 5cd48b5f8a5cf68a37085a25950fdd12 67 PRINTS PR00050 Cold shock protein signature 25 34 4.5E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SCD_RS11645 5cd48b5f8a5cf68a37085a25950fdd12 67 PRINTS PR00050 Cold shock protein signature 4 19 4.5E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SCD_RS11645 5cd48b5f8a5cf68a37085a25950fdd12 67 PRINTS PR00050 Cold shock protein signature 40 58 4.5E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SCD_RS11645 5cd48b5f8a5cf68a37085a25950fdd12 67 PIRSF PIRSF002599 1 67 8.2E-25 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 SCD_RS11645 5cd48b5f8a5cf68a37085a25950fdd12 67 SMART SM00357 3 67 6.6E-33 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 SCD_RS11645 5cd48b5f8a5cf68a37085a25950fdd12 67 PANTHER PTHR11544 1 67 7.3E-40 T 22-04-2016 SCD_RS11645 5cd48b5f8a5cf68a37085a25950fdd12 67 Gene3D G3DSA:2.40.50.140 1 65 1.6E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS13090 9a8f5a6c0ffb27dd2408b783ab08d52a 307 PIRSF PIRSF000006 1 306 2.7E-81 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 SCD_RS13090 9a8f5a6c0ffb27dd2408b783ab08d52a 307 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 6 304 4.4E-76 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 SCD_RS13090 9a8f5a6c0ffb27dd2408b783ab08d52a 307 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 11 57 7.0E-25 T 22-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 SCD_RS13090 9a8f5a6c0ffb27dd2408b783ab08d52a 307 Gene3D G3DSA:1.10.760.10 217 305 1.8E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS13090 9a8f5a6c0ffb27dd2408b783ab08d52a 307 PANTHER PTHR33751:SF1 1 54 5.8E-66 T 22-04-2016 SCD_RS13090 9a8f5a6c0ffb27dd2408b783ab08d52a 307 PANTHER PTHR33751:SF1 85 302 5.8E-66 T 22-04-2016 SCD_RS13090 9a8f5a6c0ffb27dd2408b783ab08d52a 307 SUPERFAMILY SSF46626 103 205 7.39E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS13090 9a8f5a6c0ffb27dd2408b783ab08d52a 307 SUPERFAMILY SSF46626 30 53 7.39E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS13090 9a8f5a6c0ffb27dd2408b783ab08d52a 307 PANTHER PTHR33751 1 54 5.8E-66 T 22-04-2016 SCD_RS13090 9a8f5a6c0ffb27dd2408b783ab08d52a 307 PANTHER PTHR33751 85 302 5.8E-66 T 22-04-2016 SCD_RS13090 9a8f5a6c0ffb27dd2408b783ab08d52a 307 SUPERFAMILY SSF46626 206 303 1.83E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS13090 9a8f5a6c0ffb27dd2408b783ab08d52a 307 PRINTS PR00605 Class IC cytochrome C signature 133 144 1.9E-7 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 SCD_RS13090 9a8f5a6c0ffb27dd2408b783ab08d52a 307 PRINTS PR00605 Class IC cytochrome C signature 277 299 1.9E-7 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 SCD_RS13090 9a8f5a6c0ffb27dd2408b783ab08d52a 307 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 125 199 2.5E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS13090 9a8f5a6c0ffb27dd2408b783ab08d52a 307 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 211 299 2.7E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS13090 9a8f5a6c0ffb27dd2408b783ab08d52a 307 Gene3D G3DSA:1.10.760.10 35 57 1.6E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS13090 9a8f5a6c0ffb27dd2408b783ab08d52a 307 Gene3D G3DSA:1.10.760.10 114 216 1.6E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS06495 e8b05380f3cbb60d3bbaa94bc5058d5e 424 TIGRFAM TIGR03370 VPLPA-CTERM: VPLPA-CTERM protein sorting domain 398 421 2.4E-6 T 22-04-2016 IPR022472 VPLPA-CTERM protein sorting domain SCD_RS14390 2ff8309f3a4274acb7d752d5db7cb187 592 SMART SM00382 382 584 5.5E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS14390 2ff8309f3a4274acb7d752d5db7cb187 592 ProSitePatterns PS00211 ABC transporters family signature. 495 509 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS14390 2ff8309f3a4274acb7d752d5db7cb187 592 PANTHER PTHR24221 3 55 3.8E-100 T 22-04-2016 SCD_RS14390 2ff8309f3a4274acb7d752d5db7cb187 592 PANTHER PTHR24221 73 578 3.8E-100 T 22-04-2016 SCD_RS14390 2ff8309f3a4274acb7d752d5db7cb187 592 SUPERFAMILY SSF90123 9 320 1.96E-28 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SCD_RS14390 2ff8309f3a4274acb7d752d5db7cb187 592 Gene3D G3DSA:1.20.1560.10 8 329 2.4E-18 T 22-04-2016 SCD_RS14390 2ff8309f3a4274acb7d752d5db7cb187 592 Pfam PF00005 ABC transporter 374 523 1.6E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS14390 2ff8309f3a4274acb7d752d5db7cb187 592 SUPERFAMILY SSF52540 347 582 1.25E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14390 2ff8309f3a4274acb7d752d5db7cb187 592 Pfam PF00664 ABC transporter transmembrane region 58 282 4.0E-9 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SCD_RS14390 2ff8309f3a4274acb7d752d5db7cb187 592 Gene3D G3DSA:3.40.50.300 356 585 3.6E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02425 934838bdc0c3b063255ccad1af48a6af 548 SUPERFAMILY SSF54849 137 202 2.98E-25 T 22-04-2016 SCD_RS02425 934838bdc0c3b063255ccad1af48a6af 548 Gene3D G3DSA:3.50.7.10 188 366 6.5E-98 T 22-04-2016 IPR027409 GroEL-like apical domain SCD_RS02425 934838bdc0c3b063255ccad1af48a6af 548 PRINTS PR00298 60kDa chaperonin signature 83 110 1.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SCD_RS02425 934838bdc0c3b063255ccad1af48a6af 548 PRINTS PR00298 60kDa chaperonin signature 27 53 1.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SCD_RS02425 934838bdc0c3b063255ccad1af48a6af 548 PRINTS PR00298 60kDa chaperonin signature 350 375 1.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SCD_RS02425 934838bdc0c3b063255ccad1af48a6af 548 PRINTS PR00298 60kDa chaperonin signature 398 419 1.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SCD_RS02425 934838bdc0c3b063255ccad1af48a6af 548 PRINTS PR00298 60kDa chaperonin signature 268 291 1.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SCD_RS02425 934838bdc0c3b063255ccad1af48a6af 548 PANTHER PTHR11353 3 548 5.8E-259 T 22-04-2016 SCD_RS02425 934838bdc0c3b063255ccad1af48a6af 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 9.3E-101 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 SCD_RS02425 934838bdc0c3b063255ccad1af48a6af 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 SCD_RS02425 934838bdc0c3b063255ccad1af48a6af 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 41.775 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SCD_RS02425 934838bdc0c3b063255ccad1af48a6af 548 SUPERFAMILY SSF48592 406 521 1.45E-79 T 22-04-2016 SCD_RS02425 934838bdc0c3b063255ccad1af48a6af 548 SUPERFAMILY SSF48592 7 134 1.45E-79 T 22-04-2016 SCD_RS02425 934838bdc0c3b063255ccad1af48a6af 548 Gene3D G3DSA:1.10.560.10 367 518 1.9E-42 T 22-04-2016 IPR027413 GroEL-like equatorial domain SCD_RS02425 934838bdc0c3b063255ccad1af48a6af 548 SUPERFAMILY SSF52029 185 376 6.73E-83 T 22-04-2016 IPR027409 GroEL-like apical domain SCD_RS02425 934838bdc0c3b063255ccad1af48a6af 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.9E-258 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SCD_RS02425 934838bdc0c3b063255ccad1af48a6af 548 Gene3D G3DSA:1.10.560.10 3 187 5.8E-50 T 22-04-2016 IPR027413 GroEL-like equatorial domain SCD_RS08375 e107ed0de3714c31adefe9d63f123b10 219 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 9 215 1.7E-67 T 22-04-2016 SCD_RS08375 e107ed0de3714c31adefe9d63f123b10 219 Pfam PF12710 haloacid dehalogenase-like hydrolase 14 181 7.7E-20 T 22-04-2016 SCD_RS08375 e107ed0de3714c31adefe9d63f123b10 219 Gene3D G3DSA:1.10.150.210 27 77 4.8E-24 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 SCD_RS08375 e107ed0de3714c31adefe9d63f123b10 219 Gene3D G3DSA:3.40.50.1000 78 202 2.0E-36 T 22-04-2016 IPR023214 HAD-like domain SCD_RS08375 e107ed0de3714c31adefe9d63f123b10 219 PANTHER PTHR10000:SF7 11 215 1.2E-72 T 22-04-2016 SCD_RS08375 e107ed0de3714c31adefe9d63f123b10 219 SUPERFAMILY SSF56784 11 216 8.14E-47 T 22-04-2016 IPR023214 HAD-like domain SCD_RS08375 e107ed0de3714c31adefe9d63f123b10 219 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 12 183 6.3E-30 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 SCD_RS08375 e107ed0de3714c31adefe9d63f123b10 219 PANTHER PTHR10000 11 215 1.2E-72 T 22-04-2016 SCD_RS00935 976eb663daadf2c18fe474a077e90dcf 480 SUPERFAMILY SSF161093 308 479 1.44E-49 T 22-04-2016 SCD_RS00935 976eb663daadf2c18fe474a077e90dcf 480 Gene3D G3DSA:3.10.580.10 159 289 1.7E-18 T 22-04-2016 SCD_RS00935 976eb663daadf2c18fe474a077e90dcf 480 PANTHER PTHR11911 1 460 5.6E-44 T 22-04-2016 SCD_RS00935 976eb663daadf2c18fe474a077e90dcf 480 SMART SM00116 238 286 0.0072 T 22-04-2016 IPR000644 CBS domain SCD_RS00935 976eb663daadf2c18fe474a077e90dcf 480 SMART SM00116 174 227 2.4 T 22-04-2016 IPR000644 CBS domain SCD_RS00935 976eb663daadf2c18fe474a077e90dcf 480 TIGRFAM TIGR00400 mgtE: magnesium transporter 45 479 3.1E-91 T 22-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 SCD_RS00935 976eb663daadf2c18fe474a077e90dcf 480 SUPERFAMILY SSF158791 43 164 1.57E-25 T 22-04-2016 SCD_RS00935 976eb663daadf2c18fe474a077e90dcf 480 PANTHER PTHR11911:SF99 1 460 5.6E-44 T 22-04-2016 SCD_RS00935 976eb663daadf2c18fe474a077e90dcf 480 SUPERFAMILY SSF54631 166 306 2.78E-28 T 22-04-2016 SCD_RS00935 976eb663daadf2c18fe474a077e90dcf 480 Pfam PF03448 MgtE intracellular N domain 64 165 1.3E-23 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain SCD_RS00935 976eb663daadf2c18fe474a077e90dcf 480 Gene3D G3DSA:1.10.357.20 308 479 2.4E-56 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 SCD_RS00935 976eb663daadf2c18fe474a077e90dcf 480 Pfam PF01769 Divalent cation transporter 351 473 1.0E-26 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 SCD_RS00935 976eb663daadf2c18fe474a077e90dcf 480 Pfam PF00571 CBS domain 231 279 8.4E-6 T 22-04-2016 IPR000644 CBS domain SCD_RS00935 976eb663daadf2c18fe474a077e90dcf 480 Pfam PF00571 CBS domain 167 223 5.7E-5 T 22-04-2016 IPR000644 CBS domain SCD_RS00935 976eb663daadf2c18fe474a077e90dcf 480 SMART SM00924 64 167 3.3E-34 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain SCD_RS00935 976eb663daadf2c18fe474a077e90dcf 480 Gene3D G3DSA:1.25.60.10 43 158 1.4E-22 T 22-04-2016 SCD_RS12180 4db2cef2b7fbb8d62e52a5be10d6cda2 423 SUPERFAMILY SSF54631 196 330 1.39E-28 T 22-04-2016 SCD_RS12180 4db2cef2b7fbb8d62e52a5be10d6cda2 423 SUPERFAMILY SSF56176 340 420 3.54E-22 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SCD_RS12180 4db2cef2b7fbb8d62e52a5be10d6cda2 423 Pfam PF00571 CBS domain 278 327 2.8E-7 T 22-04-2016 IPR000644 CBS domain SCD_RS12180 4db2cef2b7fbb8d62e52a5be10d6cda2 423 Gene3D G3DSA:3.30.465.10 320 417 2.6E-23 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SCD_RS12180 4db2cef2b7fbb8d62e52a5be10d6cda2 423 PANTHER PTHR22777 1 423 1.1E-127 T 22-04-2016 SCD_RS12180 4db2cef2b7fbb8d62e52a5be10d6cda2 423 Gene3D G3DSA:3.10.580.10 196 319 9.3E-16 T 22-04-2016 SCD_RS12180 4db2cef2b7fbb8d62e52a5be10d6cda2 423 Pfam PF03471 Transporter associated domain 343 416 3.5E-18 T 22-04-2016 IPR005170 Transporter-associated domain SCD_RS12180 4db2cef2b7fbb8d62e52a5be10d6cda2 423 Pfam PF01595 Domain of unknown function DUF21 13 183 5.1E-42 T 22-04-2016 IPR002550 Domain of unknown function DUF21 SCD_RS12180 4db2cef2b7fbb8d62e52a5be10d6cda2 423 SMART SM01091 341 419 1.9E-24 T 22-04-2016 IPR005170 Transporter-associated domain SCD_RS07840 6ff314b3053700af689358c91c118aa8 136 PANTHER PTHR35561:SF1 2 136 2.0E-26 T 22-04-2016 SCD_RS07840 6ff314b3053700af689358c91c118aa8 136 PANTHER PTHR35561 2 136 2.0E-26 T 22-04-2016 SCD_RS07840 6ff314b3053700af689358c91c118aa8 136 Gene3D G3DSA:3.90.1140.10 2 135 4.8E-35 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase SCD_RS07840 6ff314b3053700af689358c91c118aa8 136 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 2 135 4.8E-26 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 SCD_RS07840 6ff314b3053700af689358c91c118aa8 136 Pfam PF02834 LigT like Phosphoesterase 54 102 1.9E-6 T 22-04-2016 IPR014051 Phosphoesterase, HXTX SCD_RS07840 6ff314b3053700af689358c91c118aa8 136 Pfam PF02834 LigT like Phosphoesterase 2 51 4.0E-8 T 22-04-2016 IPR014051 Phosphoesterase, HXTX SCD_RS07840 6ff314b3053700af689358c91c118aa8 136 SUPERFAMILY SSF55144 2 135 5.41E-31 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase SCD_RS03145 d62c8be6e5e95d3859f5fb20a0f42f4f 64 SUPERFAMILY SSF46561 1 63 6.93E-19 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03145 d62c8be6e5e95d3859f5fb20a0f42f4f 64 PANTHER PTHR10916 1 64 6.2E-17 T 22-04-2016 SCD_RS03145 d62c8be6e5e95d3859f5fb20a0f42f4f 64 Pfam PF00831 Ribosomal L29 protein 4 60 2.6E-18 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03145 d62c8be6e5e95d3859f5fb20a0f42f4f 64 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 15.742 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03145 d62c8be6e5e95d3859f5fb20a0f42f4f 64 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.1E-17 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03145 d62c8be6e5e95d3859f5fb20a0f42f4f 64 Gene3D G3DSA:1.10.287.310 1 61 1.2E-19 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03145 d62c8be6e5e95d3859f5fb20a0f42f4f 64 PANTHER PTHR10916:SF0 1 64 6.2E-17 T 22-04-2016 SCD_RS15865 9e00fd68ae06e65df25605673bf55c1b 639 Pfam PF00672 HAMP domain 199 264 4.3E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS15865 9e00fd68ae06e65df25605673bf55c1b 639 Gene3D G3DSA:1.10.3210.10 443 627 1.7E-21 T 22-04-2016 IPR006674 HD domain SCD_RS15865 9e00fd68ae06e65df25605673bf55c1b 639 SUPERFAMILY SSF109604 426 625 6.28E-34 T 22-04-2016 SCD_RS15865 9e00fd68ae06e65df25605673bf55c1b 639 SMART SM00304 216 268 5.8E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS15865 9e00fd68ae06e65df25605673bf55c1b 639 Pfam PF13487 HD domain 507 578 1.5E-15 T 22-04-2016 SCD_RS15865 9e00fd68ae06e65df25605673bf55c1b 639 SMART SM00065 278 430 0.0053 T 22-04-2016 IPR003018 GAF domain GO:0005515 SCD_RS15865 9e00fd68ae06e65df25605673bf55c1b 639 Gene3D G3DSA:3.30.450.40 258 420 3.9E-18 T 22-04-2016 IPR029016 GAF domain-like SCD_RS15865 9e00fd68ae06e65df25605673bf55c1b 639 Pfam PF13185 GAF domain 277 420 2.6E-12 T 22-04-2016 IPR003018 GAF domain GO:0005515 SCD_RS15865 9e00fd68ae06e65df25605673bf55c1b 639 SMART SM00471 444 596 2.0E-8 T 22-04-2016 IPR003607 HD/PDEase domain SCD_RS15865 9e00fd68ae06e65df25605673bf55c1b 639 SUPERFAMILY SSF55781 260 422 3.49E-16 T 22-04-2016 IPR029016 GAF domain-like SCD_RS15865 9e00fd68ae06e65df25605673bf55c1b 639 SUPERFAMILY SSF158472 216 266 2.48E-8 T 22-04-2016 SCD_RS08215 bbba13ce655f7f1f1c53241262781251 257 SUPERFAMILY SSF53335 24 255 8.69E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS08215 bbba13ce655f7f1f1c53241262781251 257 Pfam PF04989 Cephalosporin hydroxylase 35 254 4.9E-98 T 22-04-2016 IPR007072 Rhamnosyl O-methyltransferase/Cephalosporin hydroxylase GO:0008168|GO:0008610 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SCD_RS08215 bbba13ce655f7f1f1c53241262781251 257 PANTHER PTHR40048 24 256 3.2E-48 T 22-04-2016 SCD_RS08215 bbba13ce655f7f1f1c53241262781251 257 Gene3D G3DSA:3.40.50.150 41 231 9.5E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS15735 812fdebfd05f18d99aac0977ff6d36b1 479 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 154 281 1.5E-9 T 22-04-2016 IPR000014 PAS domain SCD_RS15735 812fdebfd05f18d99aac0977ff6d36b1 479 SUPERFAMILY SSF55785 170 276 4.57E-12 T 22-04-2016 IPR000014 PAS domain SCD_RS15735 812fdebfd05f18d99aac0977ff6d36b1 479 Gene3D G3DSA:1.10.3210.10 295 467 2.1E-24 T 22-04-2016 IPR006674 HD domain SCD_RS15735 812fdebfd05f18d99aac0977ff6d36b1 479 Pfam PF13487 HD domain 362 424 4.1E-21 T 22-04-2016 SCD_RS15735 812fdebfd05f18d99aac0977ff6d36b1 479 SUPERFAMILY SSF109604 297 472 1.06E-35 T 22-04-2016 SCD_RS15735 812fdebfd05f18d99aac0977ff6d36b1 479 Pfam PF08447 PAS fold 183 264 3.1E-8 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SCD_RS15735 812fdebfd05f18d99aac0977ff6d36b1 479 Gene3D G3DSA:3.30.450.20 153 273 5.1E-17 T 22-04-2016 SCD_RS15735 812fdebfd05f18d99aac0977ff6d36b1 479 SMART SM00471 307 442 1.7E-6 T 22-04-2016 IPR003607 HD/PDEase domain SCD_RS08225 c620f13e933aa6ef6b1d1451e14975cd 248 SUPERFAMILY SSF53167 1 243 1.7E-82 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SCD_RS08225 c620f13e933aa6ef6b1d1451e14975cd 248 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 1 243 6.0E-85 T 22-04-2016 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 SCD_RS08225 c620f13e933aa6ef6b1d1451e14975cd 248 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 1 248 32.976 T 22-04-2016 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 SCD_RS08225 c620f13e933aa6ef6b1d1451e14975cd 248 Gene3D G3DSA:3.40.50.1580 2 243 1.0E-81 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SCD_RS08225 c620f13e933aa6ef6b1d1451e14975cd 248 PANTHER PTHR11904:SF1 3 243 2.4E-90 T 22-04-2016 SCD_RS08225 c620f13e933aa6ef6b1d1451e14975cd 248 PANTHER PTHR11904 3 243 2.4E-90 T 22-04-2016 IPR001369 PNP/MTAP phosphorylase SCD_RS08225 c620f13e933aa6ef6b1d1451e14975cd 248 Pfam PF01048 Phosphorylase superfamily 2 243 2.0E-47 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SCD_RS00440 975dea38fdd5fbfb90bea011d08d8def 416 TIGRFAM TIGR00901 2A0125: AmpG-like permease 27 365 9.6E-113 T 22-04-2016 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GO:0016020 SCD_RS00440 975dea38fdd5fbfb90bea011d08d8def 416 Gene3D G3DSA:1.20.1250.20 227 409 3.4E-14 T 22-04-2016 SCD_RS00440 975dea38fdd5fbfb90bea011d08d8def 416 Pfam PF07690 Major Facilitator Superfamily 20 370 1.1E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SCD_RS00440 975dea38fdd5fbfb90bea011d08d8def 416 SUPERFAMILY SSF103473 6 412 1.44E-31 T 22-04-2016 IPR020846 Major facilitator superfamily domain SCD_RS00440 975dea38fdd5fbfb90bea011d08d8def 416 Gene3D G3DSA:1.20.1250.20 14 199 3.4E-8 T 22-04-2016 SCD_RS00440 975dea38fdd5fbfb90bea011d08d8def 416 PANTHER PTHR12778 1 406 1.1E-87 T 22-04-2016 SCD_RS14655 7f5b885da542f941dfefb7f1c12e21f3 406 Pfam PF13579 Glycosyl transferase 4-like domain 17 192 2.2E-20 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SCD_RS14655 7f5b885da542f941dfefb7f1c12e21f3 406 PANTHER PTHR12526 84 399 9.7E-64 T 22-04-2016 SCD_RS14655 7f5b885da542f941dfefb7f1c12e21f3 406 TIGRFAM TIGR04063 stp3: PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family 4 399 5.0E-200 T 22-04-2016 IPR024004 Glycosyltransferase family 1, Daro2409 family SCD_RS14655 7f5b885da542f941dfefb7f1c12e21f3 406 SUPERFAMILY SSF53756 4 399 2.24E-76 T 22-04-2016 SCD_RS14655 7f5b885da542f941dfefb7f1c12e21f3 406 Pfam PF00534 Glycosyl transferases group 1 216 377 1.0E-32 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SCD_RS14655 7f5b885da542f941dfefb7f1c12e21f3 406 Gene3D G3DSA:3.40.50.2000 183 378 2.8E-30 T 22-04-2016 SCD_RS03155 de0e3e3f1fe0e6f4df8dfe84df1ffd6a 122 Gene3D G3DSA:2.40.150.20 1 122 1.9E-54 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SCD_RS03155 de0e3e3f1fe0e6f4df8dfe84df1ffd6a 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.131 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SCD_RS03155 de0e3e3f1fe0e6f4df8dfe84df1ffd6a 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.2E-57 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 SCD_RS03155 de0e3e3f1fe0e6f4df8dfe84df1ffd6a 122 SUPERFAMILY SSF50193 1 122 8.24E-51 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SCD_RS03155 de0e3e3f1fe0e6f4df8dfe84df1ffd6a 122 PANTHER PTHR11761 1 122 8.9E-75 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SCD_RS03155 de0e3e3f1fe0e6f4df8dfe84df1ffd6a 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site SCD_RS03155 de0e3e3f1fe0e6f4df8dfe84df1ffd6a 122 SMART SM01374 1 122 3.9E-84 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SCD_RS03155 de0e3e3f1fe0e6f4df8dfe84df1ffd6a 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 7.8E-54 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SCD_RS10810 cdb42d83ffff92faeb12d2e9ab4f3d5b 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 47 61 1.3E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SCD_RS10810 cdb42d83ffff92faeb12d2e9ab4f3d5b 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 80 93 1.3E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SCD_RS10810 cdb42d83ffff92faeb12d2e9ab4f3d5b 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 279 290 1.3E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SCD_RS10810 cdb42d83ffff92faeb12d2e9ab4f3d5b 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 217 227 1.3E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SCD_RS10810 cdb42d83ffff92faeb12d2e9ab4f3d5b 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 120 134 1.3E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SCD_RS10810 cdb42d83ffff92faeb12d2e9ab4f3d5b 305 Gene3D G3DSA:3.40.50.1370 141 287 2.3E-57 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SCD_RS10810 cdb42d83ffff92faeb12d2e9ab4f3d5b 305 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SCD_RS10810 cdb42d83ffff92faeb12d2e9ab4f3d5b 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 288 1.4E-27 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SCD_RS10810 cdb42d83ffff92faeb12d2e9ab4f3d5b 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.4E-27 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SCD_RS10810 cdb42d83ffff92faeb12d2e9ab4f3d5b 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 253 262 1.4E-27 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SCD_RS10810 cdb42d83ffff92faeb12d2e9ab4f3d5b 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 131 142 1.4E-27 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SCD_RS10810 cdb42d83ffff92faeb12d2e9ab4f3d5b 305 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 3 301 76.15 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SCD_RS10810 cdb42d83ffff92faeb12d2e9ab4f3d5b 305 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 144 6.2E-48 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SCD_RS10810 cdb42d83ffff92faeb12d2e9ab4f3d5b 305 PANTHER PTHR11405 1 300 6.9E-133 T 22-04-2016 SCD_RS10810 cdb42d83ffff92faeb12d2e9ab4f3d5b 305 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 300 2.0E-108 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SCD_RS10810 cdb42d83ffff92faeb12d2e9ab4f3d5b 305 Gene3D G3DSA:3.40.50.1370 2 140 5.3E-55 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SCD_RS10810 cdb42d83ffff92faeb12d2e9ab4f3d5b 305 SUPERFAMILY SSF53671 2 300 6.81E-103 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SCD_RS10810 cdb42d83ffff92faeb12d2e9ab4f3d5b 305 PANTHER PTHR11405:SF1 1 300 6.9E-133 T 22-04-2016 SCD_RS10810 cdb42d83ffff92faeb12d2e9ab4f3d5b 305 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 150 298 5.2E-50 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SCD_RS09655 049606ddab0b158e6145fca6e28cdfb0 786 SUPERFAMILY SSF52540 706 782 1.01E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS09655 049606ddab0b158e6145fca6e28cdfb0 786 SUPERFAMILY SSF52540 373 678 1.01E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS09655 049606ddab0b158e6145fca6e28cdfb0 786 Gene3D G3DSA:3.40.50.300 491 785 2.0E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS09655 049606ddab0b158e6145fca6e28cdfb0 786 PANTHER PTHR30258 711 778 2.2E-155 T 22-04-2016 SCD_RS09655 049606ddab0b158e6145fca6e28cdfb0 786 PANTHER PTHR30258 179 694 2.2E-155 T 22-04-2016 SCD_RS09655 049606ddab0b158e6145fca6e28cdfb0 786 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 235 331 8.1E-11 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 SCD_RS09655 049606ddab0b158e6145fca6e28cdfb0 786 Pfam PF00437 Type II/IV secretion system protein 386 653 1.4E-72 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SCD_RS09655 049606ddab0b158e6145fca6e28cdfb0 786 Gene3D G3DSA:3.30.450.90 357 486 1.1E-40 T 22-04-2016 SCD_RS09655 049606ddab0b158e6145fca6e28cdfb0 786 SMART SM00382 514 656 7.1E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS09655 049606ddab0b158e6145fca6e28cdfb0 786 PANTHER PTHR30258:SF2 711 778 2.2E-155 T 22-04-2016 SCD_RS09655 049606ddab0b158e6145fca6e28cdfb0 786 PANTHER PTHR30258:SF2 179 694 2.2E-155 T 22-04-2016 SCD_RS09655 049606ddab0b158e6145fca6e28cdfb0 786 SUPERFAMILY SSF160246 187 331 2.88E-24 T 22-04-2016 SCD_RS09655 049606ddab0b158e6145fca6e28cdfb0 786 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 581 595 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SCD_RS10180 af2e234c122c02b1cad536b817487ea8 383 PANTHER PTHR10799 82 368 1.2E-24 T 22-04-2016 SCD_RS10180 af2e234c122c02b1cad536b817487ea8 383 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 365 8.8E-47 T 22-04-2016 IPR000160 GGDEF domain SCD_RS10180 af2e234c122c02b1cad536b817487ea8 383 SUPERFAMILY SSF55073 207 369 3.45E-48 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS10180 af2e234c122c02b1cad536b817487ea8 383 Gene3D G3DSA:3.30.70.270 204 374 3.6E-56 T 22-04-2016 SCD_RS10180 af2e234c122c02b1cad536b817487ea8 383 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 198 369 2.5E-56 T 22-04-2016 IPR000160 GGDEF domain SCD_RS10180 af2e234c122c02b1cad536b817487ea8 383 Pfam PF04340 Protein of unknown function, DUF484 15 190 5.7E-16 T 22-04-2016 IPR007435 Protein of unknown function DUF484 SCD_RS10180 af2e234c122c02b1cad536b817487ea8 383 Gene3D G3DSA:3.30.450.40 46 193 2.7E-9 T 22-04-2016 IPR029016 GAF domain-like SCD_RS10180 af2e234c122c02b1cad536b817487ea8 383 PANTHER PTHR10799:SF750 82 368 1.2E-24 T 22-04-2016 SCD_RS10180 af2e234c122c02b1cad536b817487ea8 383 SUPERFAMILY SSF55781 54 200 1.79E-11 T 22-04-2016 IPR029016 GAF domain-like SCD_RS10180 af2e234c122c02b1cad536b817487ea8 383 SMART SM00267 191 370 1.3E-60 T 22-04-2016 IPR000160 GGDEF domain SCD_RS12360 7064f5dda741cd7afa9a3f2eefd13f31 411 PANTHER PTHR38038:SF1 83 401 3.4E-36 T 22-04-2016 SCD_RS12360 7064f5dda741cd7afa9a3f2eefd13f31 411 Gene3D G3DSA:3.40.50.2300 191 319 4.1E-28 T 22-04-2016 SCD_RS12360 7064f5dda741cd7afa9a3f2eefd13f31 411 Pfam PF04348 LppC putative lipoprotein 81 394 3.3E-56 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA SCD_RS12360 7064f5dda741cd7afa9a3f2eefd13f31 411 SUPERFAMILY SSF53822 83 395 2.26E-53 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SCD_RS12360 7064f5dda741cd7afa9a3f2eefd13f31 411 PANTHER PTHR38038 83 401 3.4E-36 T 22-04-2016 SCD_RS12360 7064f5dda741cd7afa9a3f2eefd13f31 411 Gene3D G3DSA:3.40.50.2300 320 386 1.4E-30 T 22-04-2016 SCD_RS12360 7064f5dda741cd7afa9a3f2eefd13f31 411 Gene3D G3DSA:3.40.50.2300 81 189 1.4E-30 T 22-04-2016 SCD_RS04075 f483c838c6d9163ad3a4803eaa8e585a 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 6.6E-135 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SCD_RS04075 f483c838c6d9163ad3a4803eaa8e585a 338 Gene3D G3DSA:1.10.1040.10 41 325 2.4E-115 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SCD_RS04075 f483c838c6d9163ad3a4803eaa8e585a 338 SUPERFAMILY SSF48179 183 332 9.35E-68 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SCD_RS04075 f483c838c6d9163ad3a4803eaa8e585a 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 8.8E-77 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SCD_RS04075 f483c838c6d9163ad3a4803eaa8e585a 338 PANTHER PTHR21371 1 337 4.3E-190 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SCD_RS04075 f483c838c6d9163ad3a4803eaa8e585a 338 Gene3D G3DSA:3.50.50.60 3 40 6.3E-5 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS04075 f483c838c6d9163ad3a4803eaa8e585a 338 SUPERFAMILY SSF51735 1 182 2.18E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS04075 f483c838c6d9163ad3a4803eaa8e585a 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 1.6E-63 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SCD_RS04075 f483c838c6d9163ad3a4803eaa8e585a 338 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 328 45.345 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SCD_RS02975 b8c83b089b59ddcc73ab40ef7679cece 381 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 54 380 1.6E-127 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 SCD_RS02975 b8c83b089b59ddcc73ab40ef7679cece 381 PANTHER PTHR22939 54 375 1.8E-127 T 22-04-2016 SCD_RS02975 b8c83b089b59ddcc73ab40ef7679cece 381 Gene3D G3DSA:2.40.10.10 169 281 8.5E-41 T 22-04-2016 SCD_RS02975 b8c83b089b59ddcc73ab40ef7679cece 381 Pfam PF13365 Trypsin-like peptidase domain 107 241 2.1E-31 T 22-04-2016 SCD_RS02975 b8c83b089b59ddcc73ab40ef7679cece 381 SMART SM00228 280 362 1.5E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS02975 b8c83b089b59ddcc73ab40ef7679cece 381 Gene3D G3DSA:2.40.10.10 54 168 7.1E-39 T 22-04-2016 SCD_RS02975 b8c83b089b59ddcc73ab40ef7679cece 381 Gene3D G3DSA:2.30.42.10 282 377 1.1E-26 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS02975 b8c83b089b59ddcc73ab40ef7679cece 381 SUPERFAMILY SSF50494 54 272 6.43E-65 T 22-04-2016 IPR009003 Peptidase S1, PA clan SCD_RS02975 b8c83b089b59ddcc73ab40ef7679cece 381 PANTHER PTHR22939:SF93 54 375 1.8E-127 T 22-04-2016 SCD_RS02975 b8c83b089b59ddcc73ab40ef7679cece 381 PRINTS PR00834 HtrA/DegQ protease family signature 137 157 9.6E-53 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SCD_RS02975 b8c83b089b59ddcc73ab40ef7679cece 381 PRINTS PR00834 HtrA/DegQ protease family signature 212 229 9.6E-53 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SCD_RS02975 b8c83b089b59ddcc73ab40ef7679cece 381 PRINTS PR00834 HtrA/DegQ protease family signature 116 128 9.6E-53 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SCD_RS02975 b8c83b089b59ddcc73ab40ef7679cece 381 PRINTS PR00834 HtrA/DegQ protease family signature 177 201 9.6E-53 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SCD_RS02975 b8c83b089b59ddcc73ab40ef7679cece 381 PRINTS PR00834 HtrA/DegQ protease family signature 234 251 9.6E-53 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SCD_RS02975 b8c83b089b59ddcc73ab40ef7679cece 381 PRINTS PR00834 HtrA/DegQ protease family signature 320 332 9.6E-53 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SCD_RS02975 b8c83b089b59ddcc73ab40ef7679cece 381 Pfam PF13180 PDZ domain 280 370 5.4E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS02975 b8c83b089b59ddcc73ab40ef7679cece 381 SUPERFAMILY SSF50156 238 362 3.81E-25 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS03045 e03d9424ca871c571f07be1a231c127c 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site SCD_RS03045 e03d9424ca871c571f07be1a231c127c 177 Pfam PF00467 KOW motif 126 158 3.3E-7 T 22-04-2016 IPR005824 KOW SCD_RS03045 e03d9424ca871c571f07be1a231c127c 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 1.0E-19 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SCD_RS03045 e03d9424ca871c571f07be1a231c127c 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 1.0E-19 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SCD_RS03045 e03d9424ca871c571f07be1a231c127c 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 1.0E-19 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SCD_RS03045 e03d9424ca871c571f07be1a231c127c 177 Gene3D G3DSA:2.30.30.30 116 177 6.5E-31 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 SCD_RS03045 e03d9424ca871c571f07be1a231c127c 177 SMART SM00738 2 111 2.6E-50 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SCD_RS03045 e03d9424ca871c571f07be1a231c127c 177 SMART SM00739 123 150 4.4E-5 T 22-04-2016 IPR005824 KOW SCD_RS03045 e03d9424ca871c571f07be1a231c127c 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 25.313 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SCD_RS03045 e03d9424ca871c571f07be1a231c127c 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 3.4E-69 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SCD_RS03045 e03d9424ca871c571f07be1a231c127c 177 Gene3D G3DSA:3.30.70.940 3 113 9.7E-47 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SCD_RS03045 e03d9424ca871c571f07be1a231c127c 177 Pfam PF02357 Transcription termination factor nusG 3 107 1.7E-28 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SCD_RS03045 e03d9424ca871c571f07be1a231c127c 177 SUPERFAMILY SSF50104 121 176 6.02E-19 T 22-04-2016 IPR008991 Translation protein SH3-like domain SCD_RS03045 e03d9424ca871c571f07be1a231c127c 177 SUPERFAMILY SSF82679 3 113 1.19E-40 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SCD_RS03045 e03d9424ca871c571f07be1a231c127c 177 PANTHER PTHR30265 1 176 1.0E-79 T 22-04-2016 SCD_RS02235 48634711eb97afeb35bc579908346705 453 Pfam PF13188 PAS domain 7 50 4.3E-4 T 22-04-2016 IPR000014 PAS domain SCD_RS02235 48634711eb97afeb35bc579908346705 453 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SCD_RS02235 48634711eb97afeb35bc579908346705 453 Gene3D G3DSA:3.40.50.300 137 311 5.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02235 48634711eb97afeb35bc579908346705 453 Gene3D G3DSA:3.30.450.20 7 119 4.2E-7 T 22-04-2016 SCD_RS02235 48634711eb97afeb35bc579908346705 453 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 163 176 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SCD_RS02235 48634711eb97afeb35bc579908346705 453 SUPERFAMILY SSF52540 139 382 1.43E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02235 48634711eb97afeb35bc579908346705 453 PANTHER PTHR32071 96 450 1.6E-143 T 22-04-2016 SCD_RS02235 48634711eb97afeb35bc579908346705 453 Gene3D G3DSA:1.10.10.60 412 450 1.8E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS02235 48634711eb97afeb35bc579908346705 453 Pfam PF00158 Sigma-54 interaction domain 139 305 1.4E-68 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SCD_RS02235 48634711eb97afeb35bc579908346705 453 Pfam PF02954 Bacterial regulatory protein, Fis family 413 450 3.0E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS02235 48634711eb97afeb35bc579908346705 453 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 434 453 2.5E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS02235 48634711eb97afeb35bc579908346705 453 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 417 434 2.5E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS02235 48634711eb97afeb35bc579908346705 453 SUPERFAMILY SSF46689 352 450 6.87E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS02235 48634711eb97afeb35bc579908346705 453 SMART SM00382 159 303 1.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS02235 48634711eb97afeb35bc579908346705 453 SUPERFAMILY SSF55785 16 130 1.9E-6 T 22-04-2016 IPR000014 PAS domain SCD_RS02235 48634711eb97afeb35bc579908346705 453 Gene3D G3DSA:1.10.8.60 312 389 2.9E-21 T 22-04-2016 SCD_RS02235 48634711eb97afeb35bc579908346705 453 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 225 240 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SCD_RS01795 43533a460f85bf5efcd7433e785ad566 284 SUPERFAMILY SSF54862 189 277 3.35E-19 T 22-04-2016 SCD_RS01795 43533a460f85bf5efcd7433e785ad566 284 SUPERFAMILY SSF54862 93 142 3.35E-19 T 22-04-2016 SCD_RS01795 43533a460f85bf5efcd7433e785ad566 284 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 23 278 7.5E-108 T 22-04-2016 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 SCD_RS01795 43533a460f85bf5efcd7433e785ad566 284 Gene3D G3DSA:3.30.70.20 190 279 1.7E-13 T 22-04-2016 SCD_RS01795 43533a460f85bf5efcd7433e785ad566 284 Gene3D G3DSA:3.30.70.20 108 109 1.7E-13 T 22-04-2016 SCD_RS01795 43533a460f85bf5efcd7433e785ad566 284 Pfam PF12801 4Fe-4S binding domain 179 213 1.5E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS01795 43533a460f85bf5efcd7433e785ad566 284 Pfam PF12801 4Fe-4S binding domain 84 127 9.1E-13 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS01795 43533a460f85bf5efcd7433e785ad566 284 PANTHER PTHR30176:SF2 1 282 4.4E-72 T 22-04-2016 SCD_RS01795 43533a460f85bf5efcd7433e785ad566 284 PANTHER PTHR30176 1 282 4.4E-72 T 22-04-2016 SCD_RS01795 43533a460f85bf5efcd7433e785ad566 284 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 225 236 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS01795 43533a460f85bf5efcd7433e785ad566 284 Pfam PF12837 4Fe-4S binding domain 219 241 9.2E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS01240 4cc0f8388e3364ad0c74eb05110a00e0 168 Pfam PF11158 Protein of unknown function (DUF2938) 11 153 7.4E-23 T 22-04-2016 IPR021329 Protein of unknown function DUF2938 SCD_RS02635 3a0c2120b9dce75bc5f30b8820e42685 260 SUPERFAMILY SSF110399 2 244 8.5E-91 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 SCD_RS02635 3a0c2120b9dce75bc5f30b8820e42685 260 Gene3D G3DSA:3.20.20.70 12 233 3.9E-54 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS02635 3a0c2120b9dce75bc5f30b8820e42685 260 PANTHER PTHR34266 1 258 6.3E-147 T 22-04-2016 SCD_RS02635 3a0c2120b9dce75bc5f30b8820e42685 260 Hamap MF_00443 Thiazole synthase [thiG]. 3 259 42.98 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 SCD_RS02635 3a0c2120b9dce75bc5f30b8820e42685 260 Pfam PF05690 Thiazole biosynthesis protein ThiG 6 253 2.6E-109 T 22-04-2016 SCD_RS12470 d3a116d2d89f6e9187c7aa5fbf5850ed 142 Pfam PF00572 Ribosomal protein L13 15 138 9.3E-55 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SCD_RS12470 d3a116d2d89f6e9187c7aa5fbf5850ed 142 SUPERFAMILY SSF52161 1 140 2.75E-58 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 SCD_RS12470 d3a116d2d89f6e9187c7aa5fbf5850ed 142 PANTHER PTHR11545 1 142 5.5E-70 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SCD_RS12470 d3a116d2d89f6e9187c7aa5fbf5850ed 142 PIRSF PIRSF002181 1 142 1.4E-47 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SCD_RS12470 d3a116d2d89f6e9187c7aa5fbf5850ed 142 Gene3D G3DSA:3.90.1180.10 3 141 1.8E-62 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 SCD_RS12470 d3a116d2d89f6e9187c7aa5fbf5850ed 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 9.7E-62 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 SCD_RS12470 d3a116d2d89f6e9187c7aa5fbf5850ed 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 27.573 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SCD_RS12660 0447872f05aa2a871068b67495346ea6 443 PANTHER PTHR10657:SF16 43 443 2.3E-119 T 22-04-2016 SCD_RS12660 0447872f05aa2a871068b67495346ea6 443 SUPERFAMILY SSF109998 41 217 9.42E-47 T 22-04-2016 IPR027304 Trigger factor/SurA domain SCD_RS12660 0447872f05aa2a871068b67495346ea6 443 SUPERFAMILY SSF54534 181 287 6.28E-24 T 22-04-2016 SCD_RS12660 0447872f05aa2a871068b67495346ea6 443 SUPERFAMILY SSF54534 294 395 3.07E-31 T 22-04-2016 SCD_RS12660 0447872f05aa2a871068b67495346ea6 443 Pfam PF09312 SurA N-terminal domain 42 158 2.1E-44 T 22-04-2016 IPR015391 SurA N-terminal SCD_RS12660 0447872f05aa2a871068b67495346ea6 443 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 335 355 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site SCD_RS12660 0447872f05aa2a871068b67495346ea6 443 Hamap MF_01183 Chaperone SurA [surA]. 15 441 35.828 T 22-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 SCD_RS12660 0447872f05aa2a871068b67495346ea6 443 PANTHER PTHR10657 43 443 2.3E-119 T 22-04-2016 SCD_RS12660 0447872f05aa2a871068b67495346ea6 443 Gene3D G3DSA:1.10.3120.10 55 131 4.4E-4 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SCD_RS12660 0447872f05aa2a871068b67495346ea6 443 Pfam PF13616 PPIC-type PPIASE domain 299 396 1.2E-26 T 22-04-2016 SCD_RS12660 0447872f05aa2a871068b67495346ea6 443 Gene3D G3DSA:3.10.50.40 181 291 1.2E-27 T 22-04-2016 SCD_RS12660 0447872f05aa2a871068b67495346ea6 443 Gene3D G3DSA:3.10.50.40 299 418 9.1E-39 T 22-04-2016 SCD_RS12660 0447872f05aa2a871068b67495346ea6 443 Pfam PF00639 PPIC-type PPIASE domain 194 285 2.0E-16 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 SCD_RS11290 b6bc4487bb81036d3718f10d14c51223 303 Gene3D G3DSA:3.30.565.10 136 296 2.2E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS11290 b6bc4487bb81036d3718f10d14c51223 303 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 190 296 2.4E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS11290 b6bc4487bb81036d3718f10d14c51223 303 Gene3D G3DSA:1.10.287.130 114 135 4.6E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS11290 b6bc4487bb81036d3718f10d14c51223 303 Gene3D G3DSA:1.10.287.130 40 71 4.6E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS11290 b6bc4487bb81036d3718f10d14c51223 303 SUPERFAMILY SSF55874 137 295 3.93E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS11290 b6bc4487bb81036d3718f10d14c51223 303 PRINTS PR00344 Bacterial sensor protein C-terminal signature 257 275 2.8E-20 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS11290 b6bc4487bb81036d3718f10d14c51223 303 PRINTS PR00344 Bacterial sensor protein C-terminal signature 244 254 2.8E-20 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS11290 b6bc4487bb81036d3718f10d14c51223 303 PRINTS PR00344 Bacterial sensor protein C-terminal signature 226 240 2.8E-20 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS11290 b6bc4487bb81036d3718f10d14c51223 303 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 294 2.8E-20 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS11290 b6bc4487bb81036d3718f10d14c51223 303 PANTHER PTHR24423 41 73 3.7E-91 T 22-04-2016 SCD_RS11290 b6bc4487bb81036d3718f10d14c51223 303 PANTHER PTHR24423 111 297 3.7E-91 T 22-04-2016 SCD_RS11290 b6bc4487bb81036d3718f10d14c51223 303 PANTHER PTHR24423 4 24 3.7E-91 T 22-04-2016 SCD_RS11290 b6bc4487bb81036d3718f10d14c51223 303 Pfam PF00512 His Kinase A (phospho-acceptor) domain 46 145 1.0E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS11290 b6bc4487bb81036d3718f10d14c51223 303 SUPERFAMILY SSF47384 115 144 3.34E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS11290 b6bc4487bb81036d3718f10d14c51223 303 SUPERFAMILY SSF47384 40 80 3.34E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS11290 b6bc4487bb81036d3718f10d14c51223 303 PANTHER PTHR24423:SF497 41 73 3.7E-91 T 22-04-2016 SCD_RS11290 b6bc4487bb81036d3718f10d14c51223 303 PANTHER PTHR24423:SF497 4 24 3.7E-91 T 22-04-2016 SCD_RS11290 b6bc4487bb81036d3718f10d14c51223 303 PANTHER PTHR24423:SF497 111 297 3.7E-91 T 22-04-2016 SCD_RS11290 b6bc4487bb81036d3718f10d14c51223 303 SMART SM00387 187 297 1.1E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS11290 b6bc4487bb81036d3718f10d14c51223 303 SMART SM00388 45 147 0.0024 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS07225 e2141fa23ac3d55c4e7d25d298541ed4 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 123 18.486 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SCD_RS07225 e2141fa23ac3d55c4e7d25d298541ed4 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 8 118 4.3E-22 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SCD_RS07225 e2141fa23ac3d55c4e7d25d298541ed4 127 TIGRFAM TIGR00494 crcB: protein CrcB 7 120 3.5E-27 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SCD_RS15815 d9b58d41e248c67d3afaa9bda679e383 632 PANTHER PTHR10799 342 620 1.4E-39 T 22-04-2016 SCD_RS15815 d9b58d41e248c67d3afaa9bda679e383 632 PANTHER PTHR10799 291 315 1.4E-39 T 22-04-2016 SCD_RS15815 d9b58d41e248c67d3afaa9bda679e383 632 SUPERFAMILY SSF55785 344 461 5.41E-21 T 22-04-2016 IPR000014 PAS domain SCD_RS15815 d9b58d41e248c67d3afaa9bda679e383 632 SUPERFAMILY SSF55073 468 625 6.54E-53 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS15815 d9b58d41e248c67d3afaa9bda679e383 632 Pfam PF02743 Cache domain 56 285 1.3E-15 T 22-04-2016 IPR033479 Double Cache domain 1 SCD_RS15815 d9b58d41e248c67d3afaa9bda679e383 632 SMART SM00267 452 625 2.6E-73 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15815 d9b58d41e248c67d3afaa9bda679e383 632 Gene3D G3DSA:3.30.450.20 187 296 4.8E-8 T 22-04-2016 SCD_RS15815 d9b58d41e248c67d3afaa9bda679e383 632 PANTHER PTHR10799:SF774 342 620 1.4E-39 T 22-04-2016 SCD_RS15815 d9b58d41e248c67d3afaa9bda679e383 632 PANTHER PTHR10799:SF774 291 315 1.4E-39 T 22-04-2016 SCD_RS15815 d9b58d41e248c67d3afaa9bda679e383 632 Gene3D G3DSA:3.30.450.20 329 450 1.1E-23 T 22-04-2016 SCD_RS15815 d9b58d41e248c67d3afaa9bda679e383 632 Gene3D G3DSA:3.30.70.270 465 627 1.7E-60 T 22-04-2016 SCD_RS15815 d9b58d41e248c67d3afaa9bda679e383 632 Gene3D G3DSA:3.30.450.20 102 186 1.4E-6 T 22-04-2016 SCD_RS15815 d9b58d41e248c67d3afaa9bda679e383 632 SMART SM00091 333 399 6.6E-9 T 22-04-2016 IPR000014 PAS domain SCD_RS15815 d9b58d41e248c67d3afaa9bda679e383 632 Pfam PF00989 PAS fold 334 449 5.7E-14 T 22-04-2016 IPR013767 PAS fold GO:0006355 SCD_RS15815 d9b58d41e248c67d3afaa9bda679e383 632 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 329 458 4.0E-19 T 22-04-2016 IPR000014 PAS domain SCD_RS15815 d9b58d41e248c67d3afaa9bda679e383 632 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 461 624 2.0E-46 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15815 d9b58d41e248c67d3afaa9bda679e383 632 Pfam PF00990 Diguanylate cyclase, GGDEF domain 463 620 9.4E-56 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15015 75e7a4da6d718581836467371714a43f 546 PRINTS PR00701 60kDa inner membrane protein signature 414 437 8.1E-77 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SCD_RS15015 75e7a4da6d718581836467371714a43f 546 PRINTS PR00701 60kDa inner membrane protein signature 162 182 8.1E-77 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SCD_RS15015 75e7a4da6d718581836467371714a43f 546 PRINTS PR00701 60kDa inner membrane protein signature 216 234 8.1E-77 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SCD_RS15015 75e7a4da6d718581836467371714a43f 546 PRINTS PR00701 60kDa inner membrane protein signature 2 23 8.1E-77 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SCD_RS15015 75e7a4da6d718581836467371714a43f 546 PRINTS PR00701 60kDa inner membrane protein signature 461 483 8.1E-77 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SCD_RS15015 75e7a4da6d718581836467371714a43f 546 PRINTS PR00701 60kDa inner membrane protein signature 75 96 8.1E-77 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SCD_RS15015 75e7a4da6d718581836467371714a43f 546 PRINTS PR00701 60kDa inner membrane protein signature 497 520 8.1E-77 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SCD_RS15015 75e7a4da6d718581836467371714a43f 546 PRINTS PR00701 60kDa inner membrane protein signature 323 343 8.1E-77 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SCD_RS15015 75e7a4da6d718581836467371714a43f 546 PRINTS PR00701 60kDa inner membrane protein signature 251 266 8.1E-77 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SCD_RS15015 75e7a4da6d718581836467371714a43f 546 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 351 2.5E-113 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal SCD_RS15015 75e7a4da6d718581836467371714a43f 546 PANTHER PTHR12428:SF14 169 529 8.4E-102 T 22-04-2016 SCD_RS15015 75e7a4da6d718581836467371714a43f 546 Pfam PF14849 YidC periplasmic domain 69 342 1.4E-86 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal SCD_RS15015 75e7a4da6d718581836467371714a43f 546 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 533 24.443 T 22-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 SCD_RS15015 75e7a4da6d718581836467371714a43f 546 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 352 530 1.0E-71 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal SCD_RS15015 75e7a4da6d718581836467371714a43f 546 PRINTS PR01900 YidC translocation/secretion protein signature 486 510 3.3E-23 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SCD_RS15015 75e7a4da6d718581836467371714a43f 546 PRINTS PR01900 YidC translocation/secretion protein signature 338 354 3.3E-23 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SCD_RS15015 75e7a4da6d718581836467371714a43f 546 PRINTS PR01900 YidC translocation/secretion protein signature 467 482 3.3E-23 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SCD_RS15015 75e7a4da6d718581836467371714a43f 546 PANTHER PTHR12428 169 529 8.4E-102 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SCD_RS15015 75e7a4da6d718581836467371714a43f 546 Pfam PF02096 60Kd inner membrane protein 353 530 2.7E-61 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SCD_RS06910 ef8992ae08f77a627520f31d202dbac3 79 SUPERFAMILY SSF52833 2 77 1.78E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS06910 ef8992ae08f77a627520f31d202dbac3 79 Pfam PF05768 Glutaredoxin-like domain (DUF836) 3 74 1.9E-14 T 22-04-2016 IPR008554 Glutaredoxin-like SCD_RS06910 ef8992ae08f77a627520f31d202dbac3 79 Gene3D G3DSA:3.40.30.10 3 76 2.9E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS10935 5e8290d2ba99a6f2dccc5c73ffe58304 301 Pfam PF01145 SPFH domain / Band 7 family 21 190 3.6E-31 T 22-04-2016 IPR001107 Band 7 domain SCD_RS10935 5e8290d2ba99a6f2dccc5c73ffe58304 301 SMART SM00244 17 175 4.7E-58 T 22-04-2016 IPR001107 Band 7 domain SCD_RS10935 5e8290d2ba99a6f2dccc5c73ffe58304 301 PANTHER PTHR10264:SF27 3 299 2.8E-134 T 22-04-2016 SCD_RS10935 5e8290d2ba99a6f2dccc5c73ffe58304 301 SUPERFAMILY SSF117892 48 182 3.14E-39 T 22-04-2016 IPR001107 Band 7 domain SCD_RS10935 5e8290d2ba99a6f2dccc5c73ffe58304 301 Pfam PF16200 C-terminal region of band_7 240 300 4.0E-27 T 22-04-2016 IPR032435 Band 7, C-terminal extension SCD_RS10935 5e8290d2ba99a6f2dccc5c73ffe58304 301 PRINTS PR00721 Stomatin signature 107 124 2.8E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SCD_RS10935 5e8290d2ba99a6f2dccc5c73ffe58304 301 PRINTS PR00721 Stomatin signature 127 150 2.8E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SCD_RS10935 5e8290d2ba99a6f2dccc5c73ffe58304 301 PRINTS PR00721 Stomatin signature 170 191 2.8E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SCD_RS10935 5e8290d2ba99a6f2dccc5c73ffe58304 301 PRINTS PR00721 Stomatin signature 151 169 2.8E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SCD_RS10935 5e8290d2ba99a6f2dccc5c73ffe58304 301 PRINTS PR00721 Stomatin signature 24 46 2.8E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SCD_RS10935 5e8290d2ba99a6f2dccc5c73ffe58304 301 PRINTS PR00721 Stomatin signature 72 93 2.8E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SCD_RS10935 5e8290d2ba99a6f2dccc5c73ffe58304 301 PANTHER PTHR10264 3 299 2.8E-134 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SCD_RS14450 bc811a96f46ea507488b9410544ecbfe 623 PANTHER PTHR30557 187 620 0.0 T 22-04-2016 SCD_RS14450 bc811a96f46ea507488b9410544ecbfe 623 PANTHER PTHR30557 20 96 0.0 T 22-04-2016 SCD_RS14450 bc811a96f46ea507488b9410544ecbfe 623 PANTHER PTHR30557 130 160 0.0 T 22-04-2016 SCD_RS14450 bc811a96f46ea507488b9410544ecbfe 623 Pfam PF01964 Radical SAM ThiC family 139 584 5.3E-200 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 SCD_RS14450 bc811a96f46ea507488b9410544ecbfe 623 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 137 590 56.503 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 SCD_RS14450 bc811a96f46ea507488b9410544ecbfe 623 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 137 588 4.6E-216 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 SCD_RS14450 bc811a96f46ea507488b9410544ecbfe 623 Pfam PF13667 ThiC-associated domain 21 98 3.2E-34 T 22-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 SCD_RS14450 bc811a96f46ea507488b9410544ecbfe 623 PANTHER PTHR30557:SF1 187 620 0.0 T 22-04-2016 SCD_RS14450 bc811a96f46ea507488b9410544ecbfe 623 PANTHER PTHR30557:SF1 20 96 0.0 T 22-04-2016 SCD_RS14450 bc811a96f46ea507488b9410544ecbfe 623 PANTHER PTHR30557:SF1 130 160 0.0 T 22-04-2016 SCD_RS11015 463cabec8afeb436ed4bfe7c33be17f3 357 Gene3D G3DSA:2.30.30.60 114 160 3.0E-11 T 22-04-2016 SCD_RS11015 463cabec8afeb436ed4bfe7c33be17f3 357 PANTHER PTHR30221 17 288 1.4E-26 T 22-04-2016 SCD_RS11015 463cabec8afeb436ed4bfe7c33be17f3 357 SUPERFAMILY SSF50182 98 160 9.81E-12 T 22-04-2016 IPR010920 LSM domain SCD_RS11015 463cabec8afeb436ed4bfe7c33be17f3 357 SUPERFAMILY SSF82689 168 251 6.54E-7 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SCD_RS11015 463cabec8afeb436ed4bfe7c33be17f3 357 Pfam PF00924 Mechanosensitive ion channel 51 248 2.1E-19 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SCD_RS03755 cd29d5066d7959fda3a109bb5a3839ed 261 Gene3D G3DSA:3.40.50.300 1 227 1.5E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03755 cd29d5066d7959fda3a109bb5a3839ed 261 SUPERFAMILY SSF52540 2 227 5.65E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03755 cd29d5066d7959fda3a109bb5a3839ed 261 Pfam PF00005 ABC transporter 19 167 9.9E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS03755 cd29d5066d7959fda3a109bb5a3839ed 261 SMART SM00382 27 214 3.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS03755 cd29d5066d7959fda3a109bb5a3839ed 261 PANTHER PTHR24220 3 239 1.7E-63 T 22-04-2016 SCD_RS03755 cd29d5066d7959fda3a109bb5a3839ed 261 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS03755 cd29d5066d7959fda3a109bb5a3839ed 261 PANTHER PTHR24220:SF66 3 239 1.7E-63 T 22-04-2016 SCD_RS00790 72f56ea26d1089cd9e6be477a28e636c 79 Gene3D G3DSA:3.30.110.40 5 77 1.2E-29 T 22-04-2016 IPR001455 TusA-like domain SCD_RS00790 72f56ea26d1089cd9e6be477a28e636c 79 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 10 34 - T 22-04-2016 IPR001455 TusA-like domain SCD_RS00790 72f56ea26d1089cd9e6be477a28e636c 79 Pfam PF01206 Sulfurtransferase TusA 9 77 1.2E-23 T 22-04-2016 IPR001455 TusA-like domain SCD_RS00790 72f56ea26d1089cd9e6be477a28e636c 79 PANTHER PTHR33279 9 79 8.7E-21 T 22-04-2016 SCD_RS00790 72f56ea26d1089cd9e6be477a28e636c 79 SUPERFAMILY SSF64307 3 77 7.98E-24 T 22-04-2016 IPR001455 TusA-like domain SCD_RS13640 e9a07d1be18823b4449388657dfa0117 158 Gene3D G3DSA:3.10.129.10 4 142 4.2E-8 T 22-04-2016 IPR029069 HotDog domain SCD_RS13640 e9a07d1be18823b4449388657dfa0117 158 SUPERFAMILY SSF54637 10 145 9.2E-13 T 22-04-2016 IPR029069 HotDog domain SCD_RS12900 dc09fa8636134a4b37d845b9396554b1 137 SUPERFAMILY SSF51316 2 133 1.67E-46 T 22-04-2016 IPR011057 Mss4-like SCD_RS12900 dc09fa8636134a4b37d845b9396554b1 137 Gene3D G3DSA:3.90.1590.10 2 131 1.0E-41 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 SCD_RS12900 dc09fa8636134a4b37d845b9396554b1 137 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 24 112 7.5E-22 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 SCD_RS14980 884bec9a3ff63b8aa9df101d217960a1 287 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 43 280 1.5E-42 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SCD_RS14980 884bec9a3ff63b8aa9df101d217960a1 287 PRINTS PR00123 ATP synthase A subunit signature 266 281 3.3E-14 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SCD_RS14980 884bec9a3ff63b8aa9df101d217960a1 287 PRINTS PR00123 ATP synthase A subunit signature 206 228 3.3E-14 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SCD_RS14980 884bec9a3ff63b8aa9df101d217960a1 287 PRINTS PR00123 ATP synthase A subunit signature 109 125 3.3E-14 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SCD_RS14980 884bec9a3ff63b8aa9df101d217960a1 287 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 286 15.007 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SCD_RS14980 884bec9a3ff63b8aa9df101d217960a1 287 PANTHER PTHR11410 1 287 5.9E-85 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SCD_RS14980 884bec9a3ff63b8aa9df101d217960a1 287 Pfam PF00119 ATP synthase A chain 52 279 1.9E-52 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SCD_RS14980 884bec9a3ff63b8aa9df101d217960a1 287 Gene3D G3DSA:1.20.120.220 102 286 1.9E-50 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SCD_RS14980 884bec9a3ff63b8aa9df101d217960a1 287 PANTHER PTHR11410:SF7 1 287 5.9E-85 T 22-04-2016 SCD_RS14980 884bec9a3ff63b8aa9df101d217960a1 287 SUPERFAMILY SSF81336 103 280 3.14E-40 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SCD_RS14980 884bec9a3ff63b8aa9df101d217960a1 287 ProSitePatterns PS00449 ATP synthase a subunit signature. 209 218 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site SCD_RS09740 b707b007eba81f2a7992dd42a8e97edc 194 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 24.199 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 SCD_RS09740 b707b007eba81f2a7992dd42a8e97edc 194 PANTHER PTHR30335:SF0 2 193 1.6E-101 T 22-04-2016 SCD_RS09740 b707b007eba81f2a7992dd42a8e97edc 194 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 190 2.3E-78 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 SCD_RS09740 b707b007eba81f2a7992dd42a8e97edc 194 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 6.2E-55 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SCD_RS09740 b707b007eba81f2a7992dd42a8e97edc 194 PIRSF PIRSF006102 1 193 1.2E-51 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SCD_RS09740 b707b007eba81f2a7992dd42a8e97edc 194 PANTHER PTHR30335 2 193 1.6E-101 T 22-04-2016 SCD_RS02565 e3ce3c17bc74b91f3f25310cb3d5754b 239 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 2.6E-119 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 SCD_RS02565 e3ce3c17bc74b91f3f25310cb3d5754b 239 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 49.541 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 SCD_RS02565 e3ce3c17bc74b91f3f25310cb3d5754b 239 SUPERFAMILY SSF54211 1 181 2.13E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SCD_RS02565 e3ce3c17bc74b91f3f25310cb3d5754b 239 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 2.5E-24 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SCD_RS02565 e3ce3c17bc74b91f3f25310cb3d5754b 239 Pfam PF03725 3' exoribonuclease family, domain 2 158 224 3.6E-10 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SCD_RS02565 e3ce3c17bc74b91f3f25310cb3d5754b 239 Gene3D G3DSA:3.30.230.70 7 235 3.9E-31 T 22-04-2016 IPR027408 PNPase/RNase PH domain SCD_RS02565 e3ce3c17bc74b91f3f25310cb3d5754b 239 PANTHER PTHR11953:SF0 1 236 2.8E-84 T 22-04-2016 SCD_RS02565 e3ce3c17bc74b91f3f25310cb3d5754b 239 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 22-04-2016 IPR018336 Ribonuclease PH, conserved site SCD_RS02565 e3ce3c17bc74b91f3f25310cb3d5754b 239 PANTHER PTHR11953 1 236 2.8E-84 T 22-04-2016 SCD_RS02565 e3ce3c17bc74b91f3f25310cb3d5754b 239 SUPERFAMILY SSF55666 153 236 2.36E-25 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SCD_RS05340 c940334d8db6e8a4006d139eb726d4a8 226 SMART SM00954 2 101 5.4E-6 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 SCD_RS05340 c940334d8db6e8a4006d139eb726d4a8 226 Gene3D G3DSA:3.30.460.10 2 80 1.5E-12 T 22-04-2016 SCD_RS05340 c940334d8db6e8a4006d139eb726d4a8 226 SUPERFAMILY SSF81301 3 88 4.09E-16 T 22-04-2016 SCD_RS05340 c940334d8db6e8a4006d139eb726d4a8 226 Pfam PF04607 Region found in RelA / SpoT proteins 3 89 2.0E-13 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 SCD_RS10420 c3f850bd81b676cc4f309c78e9fc117f 104 SUPERFAMILY SSF141091 1 101 1.57E-39 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 SCD_RS10420 c3f850bd81b676cc4f309c78e9fc117f 104 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 22-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS10420 c3f850bd81b676cc4f309c78e9fc117f 104 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 28.002 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS10420 c3f850bd81b676cc4f309c78e9fc117f 104 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.3E-41 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 SCD_RS10420 c3f850bd81b676cc4f309c78e9fc117f 104 PANTHER PTHR21349 1 102 1.3E-46 T 22-04-2016 SCD_RS10420 c3f850bd81b676cc4f309c78e9fc117f 104 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.5E-38 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS07520 b1ff8eb0ac60351523198f72444197a3 209 PANTHER PTHR11911 18 202 9.3E-20 T 22-04-2016 SCD_RS07520 b1ff8eb0ac60351523198f72444197a3 209 SMART SM00116 156 206 0.0017 T 22-04-2016 IPR000644 CBS domain SCD_RS07520 b1ff8eb0ac60351523198f72444197a3 209 SMART SM00116 74 122 7.8E-5 T 22-04-2016 IPR000644 CBS domain SCD_RS07520 b1ff8eb0ac60351523198f72444197a3 209 SUPERFAMILY SSF54631 51 202 2.45E-28 T 22-04-2016 SCD_RS07520 b1ff8eb0ac60351523198f72444197a3 209 Gene3D G3DSA:3.10.580.10 63 202 9.9E-23 T 22-04-2016 SCD_RS07520 b1ff8eb0ac60351523198f72444197a3 209 Pfam PF00571 CBS domain 68 122 3.4E-9 T 22-04-2016 IPR000644 CBS domain SCD_RS07520 b1ff8eb0ac60351523198f72444197a3 209 Pfam PF00571 CBS domain 149 202 3.1E-8 T 22-04-2016 IPR000644 CBS domain SCD_RS07520 b1ff8eb0ac60351523198f72444197a3 209 PANTHER PTHR11911:SF90 18 202 9.3E-20 T 22-04-2016 SCD_RS02555 0b0ea13741701228a71c818fc228a4b4 321 Gene3D G3DSA:3.30.200.20 17 100 1.3E-12 T 22-04-2016 SCD_RS02555 0b0ea13741701228a71c818fc228a4b4 321 Gene3D G3DSA:1.10.510.10 101 300 8.4E-40 T 22-04-2016 SCD_RS02555 0b0ea13741701228a71c818fc228a4b4 321 PANTHER PTHR24362 74 296 1.8E-48 T 22-04-2016 SCD_RS02555 0b0ea13741701228a71c818fc228a4b4 321 PANTHER PTHR24362 17 57 1.8E-48 T 22-04-2016 SCD_RS02555 0b0ea13741701228a71c818fc228a4b4 321 SUPERFAMILY SSF56112 15 290 2.16E-53 T 22-04-2016 IPR011009 Protein kinase-like domain SCD_RS02555 0b0ea13741701228a71c818fc228a4b4 321 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 155 167 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 SCD_RS02555 0b0ea13741701228a71c818fc228a4b4 321 Pfam PF00069 Protein kinase domain 18 284 3.0E-35 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SCD_RS02555 0b0ea13741701228a71c818fc228a4b4 321 SMART SM00220 18 289 3.3E-34 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SCD_RS11890 f0db7a35694d590d0a2e64bb42cfbe3e 231 Pfam PF00005 ABC transporter 26 174 3.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS11890 f0db7a35694d590d0a2e64bb42cfbe3e 231 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS11890 f0db7a35694d590d0a2e64bb42cfbe3e 231 PANTHER PTHR24220 7 230 3.0E-119 T 22-04-2016 SCD_RS11890 f0db7a35694d590d0a2e64bb42cfbe3e 231 PANTHER PTHR24220:SF578 7 230 3.0E-119 T 22-04-2016 SCD_RS11890 f0db7a35694d590d0a2e64bb42cfbe3e 231 SMART SM00382 35 223 1.7E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS11890 f0db7a35694d590d0a2e64bb42cfbe3e 231 SUPERFAMILY SSF52540 5 229 7.92E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11890 f0db7a35694d590d0a2e64bb42cfbe3e 231 Gene3D G3DSA:3.40.50.300 4 230 3.3E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00810 e72a91a644e731c087fb5bb971ce122a 429 Gene3D G3DSA:3.50.50.60 279 359 7.5E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS00810 e72a91a644e731c087fb5bb971ce122a 429 Gene3D G3DSA:3.50.50.60 34 147 7.5E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS00810 e72a91a644e731c087fb5bb971ce122a 429 PANTHER PTHR10632:SF10 27 389 9.5E-115 T 22-04-2016 SCD_RS00810 e72a91a644e731c087fb5bb971ce122a 429 SUPERFAMILY SSF51905 155 278 5.18E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS00810 e72a91a644e731c087fb5bb971ce122a 429 SUPERFAMILY SSF51905 35 139 5.34E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS00810 e72a91a644e731c087fb5bb971ce122a 429 SUPERFAMILY SSF51905 284 356 5.34E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS00810 e72a91a644e731c087fb5bb971ce122a 429 PANTHER PTHR10632 27 389 9.5E-115 T 22-04-2016 SCD_RS00810 e72a91a644e731c087fb5bb971ce122a 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 35 138 2.7E-13 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS00810 e72a91a644e731c087fb5bb971ce122a 429 Gene3D G3DSA:3.50.50.60 157 276 4.6E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS13125 cc770ba52a23e8cd7fafaee78030dc4e 302 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 70 92 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site SCD_RS13125 cc770ba52a23e8cd7fafaee78030dc4e 302 Pfam PF01040 UbiA prenyltransferase family 31 281 1.9E-63 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 SCD_RS13125 cc770ba52a23e8cd7fafaee78030dc4e 302 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 19 295 6.3E-97 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 SCD_RS13125 cc770ba52a23e8cd7fafaee78030dc4e 302 PANTHER PTHR11048 19 298 8.2E-80 T 22-04-2016 SCD_RS13125 cc770ba52a23e8cd7fafaee78030dc4e 302 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 15 296 19.722 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 SUPERFAMILY SSF51905 1 347 1.69E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 5.3E-40 T 22-04-2016 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 186 204 5.3E-40 T 22-04-2016 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.3E-40 T 22-04-2016 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 302 324 5.3E-40 T 22-04-2016 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 273 289 5.3E-40 T 22-04-2016 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 PIRSF PIRSF000350 1 472 5.4E-86 T 22-04-2016 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 PANTHER PTHR22912 1 127 8.8E-214 T 22-04-2016 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 PANTHER PTHR22912 145 468 8.8E-214 T 22-04-2016 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 SUPERFAMILY SSF55424 352 474 1.89E-40 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 337 1.0E-67 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 288 1.9E-77 T 22-04-2016 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 1.9E-77 T 22-04-2016 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 439 459 1.9E-77 T 22-04-2016 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 186 211 1.9E-77 T 22-04-2016 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 352 373 1.9E-77 T 22-04-2016 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.9E-77 T 22-04-2016 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 159 1.9E-77 T 22-04-2016 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 417 432 1.9E-77 T 22-04-2016 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 317 324 1.9E-77 T 22-04-2016 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 Gene3D G3DSA:3.50.50.60 4 151 4.5E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 46 56 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 Gene3D G3DSA:3.30.390.30 344 474 2.8E-47 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 PANTHER PTHR22912:SF131 1 127 8.8E-214 T 22-04-2016 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 PANTHER PTHR22912:SF131 145 468 8.8E-214 T 22-04-2016 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 5 475 2.5E-157 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 Gene3D G3DSA:3.50.50.60 152 343 3.2E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS07440 70ec0c8e6c1ac5a6bdfa02e984e43691 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 356 464 5.7E-35 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SCD_RS05495 690591b085c8e148a26db470df79ef8e 153 PANTHER PTHR10938 1 153 3.4E-56 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SCD_RS05495 690591b085c8e148a26db470df79ef8e 153 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 66 151 3.6E-38 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SCD_RS05495 690591b085c8e148a26db470df79ef8e 153 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 153 24.888 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SCD_RS05495 690591b085c8e148a26db470df79ef8e 153 Gene3D G3DSA:3.10.20.80 1 60 1.9E-25 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SCD_RS05495 690591b085c8e148a26db470df79ef8e 153 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 59 3.5E-23 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SCD_RS05495 690591b085c8e148a26db470df79ef8e 153 SUPERFAMILY SSF54364 1 60 1.7E-21 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SCD_RS05495 690591b085c8e148a26db470df79ef8e 153 Gene3D G3DSA:3.30.110.10 62 153 5.0E-40 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SCD_RS05495 690591b085c8e148a26db470df79ef8e 153 SUPERFAMILY SSF55200 66 152 3.4E-34 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SCD_RS05495 690591b085c8e148a26db470df79ef8e 153 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 153 8.6E-61 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SCD_RS09745 1e34c5dea3aef11049f70a265c4964ec 179 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 1 179 35.574 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 SCD_RS09745 1e34c5dea3aef11049f70a265c4964ec 179 PANTHER PTHR11938:SF64 7 169 1.7E-42 T 22-04-2016 SCD_RS09745 1e34c5dea3aef11049f70a265c4964ec 179 Pfam PF14697 4Fe-4S dicluster domain 103 157 8.3E-14 T 22-04-2016 SCD_RS09745 1e34c5dea3aef11049f70a265c4964ec 179 Pfam PF04060 Putative Fe-S cluster 41 73 3.4E-13 T 22-04-2016 IPR007202 4Fe-4S domain GO:0051536 SCD_RS09745 1e34c5dea3aef11049f70a265c4964ec 179 Gene3D G3DSA:3.30.70.20 104 160 1.2E-15 T 22-04-2016 SCD_RS09745 1e34c5dea3aef11049f70a265c4964ec 179 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 140 151 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS09745 1e34c5dea3aef11049f70a265c4964ec 179 PANTHER PTHR11938 7 169 1.7E-42 T 22-04-2016 SCD_RS09745 1e34c5dea3aef11049f70a265c4964ec 179 PIRSF PIRSF005784 1 179 1.0E-63 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 SCD_RS09745 1e34c5dea3aef11049f70a265c4964ec 179 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 175 6.6E-63 T 22-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 SCD_RS09745 1e34c5dea3aef11049f70a265c4964ec 179 SUPERFAMILY SSF54862 38 169 1.14E-25 T 22-04-2016 SCD_RS08505 ce7ba13c4d6a5fcd4da739909cd282ac 143 Gene3D G3DSA:3.30.300.70 3 72 1.6E-16 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal SCD_RS08505 ce7ba13c4d6a5fcd4da739909cd282ac 143 Pfam PF02576 Putative ribosome maturation factor RimP 7 139 3.2E-33 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 SCD_RS08505 ce7ba13c4d6a5fcd4da739909cd282ac 143 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 1 143 20.158 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 SCD_RS08505 ce7ba13c4d6a5fcd4da739909cd282ac 143 PANTHER PTHR33867:SF1 2 143 3.8E-30 T 22-04-2016 SCD_RS08505 ce7ba13c4d6a5fcd4da739909cd282ac 143 SUPERFAMILY SSF74942 76 142 3.66E-14 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal SCD_RS08505 ce7ba13c4d6a5fcd4da739909cd282ac 143 SUPERFAMILY SSF75420 3 75 1.96E-15 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal SCD_RS08505 ce7ba13c4d6a5fcd4da739909cd282ac 143 PANTHER PTHR33867 2 143 3.8E-30 T 22-04-2016 SCD_RS08505 ce7ba13c4d6a5fcd4da739909cd282ac 143 Gene3D G3DSA:2.30.30.180 79 140 3.6E-12 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal SCD_RS00575 a204cb92a75c91558ff8603dab9e64d6 635 Gene3D G3DSA:1.25.40.10 392 453 6.9E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS00575 a204cb92a75c91558ff8603dab9e64d6 635 Gene3D G3DSA:1.25.40.10 588 611 6.9E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS00575 a204cb92a75c91558ff8603dab9e64d6 635 Gene3D G3DSA:1.25.40.10 527 536 6.9E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS00575 a204cb92a75c91558ff8603dab9e64d6 635 SMART SM00954 90 254 8.3E-7 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 SCD_RS00575 a204cb92a75c91558ff8603dab9e64d6 635 Pfam PF04607 Region found in RelA / SpoT proteins 90 250 6.5E-17 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 SCD_RS00575 a204cb92a75c91558ff8603dab9e64d6 635 SUPERFAMILY SSF81301 85 148 3.92E-17 T 22-04-2016 SCD_RS00575 a204cb92a75c91558ff8603dab9e64d6 635 SUPERFAMILY SSF81301 196 253 3.92E-17 T 22-04-2016 SCD_RS00575 a204cb92a75c91558ff8603dab9e64d6 635 Gene3D G3DSA:3.30.460.10 85 234 3.9E-13 T 22-04-2016 SCD_RS00575 a204cb92a75c91558ff8603dab9e64d6 635 SUPERFAMILY SSF48452 580 634 6.0E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS00575 a204cb92a75c91558ff8603dab9e64d6 635 SUPERFAMILY SSF48452 354 461 6.0E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS03225 21a6bb88ee505ac06dd2b5d5c9d2ab49 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 6 208 3.6E-75 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SCD_RS03225 21a6bb88ee505ac06dd2b5d5c9d2ab49 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 34.487 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SCD_RS03225 21a6bb88ee505ac06dd2b5d5c9d2ab49 208 Gene3D G3DSA:3.10.290.10 101 199 1.3E-29 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS03225 21a6bb88ee505ac06dd2b5d5c9d2ab49 208 SMART SM00363 98 162 3.2E-18 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS03225 21a6bb88ee505ac06dd2b5d5c9d2ab49 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 SCD_RS03225 21a6bb88ee505ac06dd2b5d5c9d2ab49 208 Gene3D G3DSA:1.10.1050.10 3 100 1.2E-41 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SCD_RS03225 21a6bb88ee505ac06dd2b5d5c9d2ab49 208 Pfam PF01479 S4 domain 99 145 3.2E-19 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS03225 21a6bb88ee505ac06dd2b5d5c9d2ab49 208 SUPERFAMILY SSF55174 5 208 7.33E-71 T 22-04-2016 SCD_RS03225 21a6bb88ee505ac06dd2b5d5c9d2ab49 208 PANTHER PTHR11831:SF4 1 208 7.4E-84 T 22-04-2016 SCD_RS03225 21a6bb88ee505ac06dd2b5d5c9d2ab49 208 SMART SM01390 3 97 1.0E-52 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SCD_RS03225 21a6bb88ee505ac06dd2b5d5c9d2ab49 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 6 97 3.7E-28 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SCD_RS03225 21a6bb88ee505ac06dd2b5d5c9d2ab49 208 PANTHER PTHR11831 1 208 7.4E-84 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 SCD_RS00335 0a4696289c5e86a99585a599d02e4f63 82 PANTHER PTHR33713:SF4 1 71 4.5E-15 T 22-04-2016 SCD_RS00335 0a4696289c5e86a99585a599d02e4f63 82 PANTHER PTHR33713 1 71 4.5E-15 T 22-04-2016 SCD_RS00335 0a4696289c5e86a99585a599d02e4f63 82 Gene3D G3DSA:3.40.1620.10 1 49 1.1E-18 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SCD_RS00335 0a4696289c5e86a99585a599d02e4f63 82 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 51 4.2E-10 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SCD_RS00335 0a4696289c5e86a99585a599d02e4f63 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 66 3.8E-12 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SCD_RS00335 0a4696289c5e86a99585a599d02e4f63 82 SUPERFAMILY SSF143120 1 48 3.14E-10 T 22-04-2016 SCD_RS12040 3daff840375f4dad596d1b2bdb5188c3 310 Pfam PF00990 Diguanylate cyclase, GGDEF domain 150 305 7.6E-47 T 22-04-2016 IPR000160 GGDEF domain SCD_RS12040 3daff840375f4dad596d1b2bdb5188c3 310 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 145 307 9.1E-52 T 22-04-2016 IPR000160 GGDEF domain SCD_RS12040 3daff840375f4dad596d1b2bdb5188c3 310 SMART SM00267 137 309 6.7E-60 T 22-04-2016 IPR000160 GGDEF domain SCD_RS12040 3daff840375f4dad596d1b2bdb5188c3 310 Gene3D G3DSA:3.30.70.270 150 308 1.2E-54 T 22-04-2016 SCD_RS12040 3daff840375f4dad596d1b2bdb5188c3 310 SUPERFAMILY SSF55073 153 308 2.9E-51 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS12040 3daff840375f4dad596d1b2bdb5188c3 310 PANTHER PTHR10799 107 306 2.5E-30 T 22-04-2016 SCD_RS12040 3daff840375f4dad596d1b2bdb5188c3 310 PANTHER PTHR10799:SF686 107 306 2.5E-30 T 22-04-2016 SCD_RS12040 3daff840375f4dad596d1b2bdb5188c3 310 SUPERFAMILY SSF55785 39 137 5.98E-5 T 22-04-2016 IPR000014 PAS domain SCD_RS12040 3daff840375f4dad596d1b2bdb5188c3 310 Gene3D G3DSA:3.30.450.20 16 128 9.3E-4 T 22-04-2016 SCD_RS05385 c3175afa23885a5f56a5c00e3013d710 415 PANTHER PTHR33525:SF4 9 413 1.0E-76 T 22-04-2016 SCD_RS05385 c3175afa23885a5f56a5c00e3013d710 415 Gene3D G3DSA:1.10.3150.10 189 375 4.6E-26 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS05385 c3175afa23885a5f56a5c00e3013d710 415 PANTHER PTHR33525 9 413 1.0E-76 T 22-04-2016 SCD_RS05385 c3175afa23885a5f56a5c00e3013d710 415 PIRSF PIRSF003180 7 413 2.5E-102 T 22-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing SCD_RS05385 c3175afa23885a5f56a5c00e3013d710 415 Gene3D G3DSA:3.20.20.450 87 188 8.2E-12 T 22-04-2016 IPR001633 EAL domain SCD_RS05385 c3175afa23885a5f56a5c00e3013d710 415 Pfam PF08668 HDOD domain 226 329 3.6E-12 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS05385 c3175afa23885a5f56a5c00e3013d710 415 SUPERFAMILY SSF109604 188 409 4.71E-30 T 22-04-2016 SCD_RS05385 c3175afa23885a5f56a5c00e3013d710 415 SMART SM00052 1 202 0.001 T 22-04-2016 IPR001633 EAL domain SCD_RS05385 c3175afa23885a5f56a5c00e3013d710 415 SUPERFAMILY SSF141868 4 198 5.89E-22 T 22-04-2016 IPR001633 EAL domain SCD_RS05385 c3175afa23885a5f56a5c00e3013d710 415 Pfam PF00563 EAL domain 86 197 2.7E-12 T 22-04-2016 IPR001633 EAL domain SCD_RS00485 f4def27387be1279258a8f56c9ecc13b 301 PIRSF PIRSF038471 6 283 1.8E-73 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 SCD_RS00485 f4def27387be1279258a8f56c9ecc13b 301 PANTHER PTHR34138:SF1 5 283 1.6E-59 T 22-04-2016 SCD_RS00485 f4def27387be1279258a8f56c9ecc13b 301 PANTHER PTHR34138 5 283 1.6E-59 T 22-04-2016 SCD_RS00485 f4def27387be1279258a8f56c9ecc13b 301 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 9 276 2.9E-51 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 SCD_RS00485 f4def27387be1279258a8f56c9ecc13b 301 Pfam PF04085 rod shape-determining protein MreC 128 271 3.9E-33 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 SCD_RS01125 c4df5a5c8bc33bd71bd8abb65419a150 292 SUPERFAMILY SSF52091 169 278 2.75E-19 T 22-04-2016 IPR002645 STAS domain SCD_RS01125 c4df5a5c8bc33bd71bd8abb65419a150 292 Gene3D G3DSA:3.30.750.24 170 262 2.0E-16 T 22-04-2016 IPR002645 STAS domain SCD_RS01125 c4df5a5c8bc33bd71bd8abb65419a150 292 PANTHER PTHR33745 148 291 1.6E-46 T 22-04-2016 SCD_RS01125 c4df5a5c8bc33bd71bd8abb65419a150 292 PANTHER PTHR33745:SF1 148 291 1.6E-46 T 22-04-2016 SCD_RS01125 c4df5a5c8bc33bd71bd8abb65419a150 292 Pfam PF01740 STAS domain 172 263 2.0E-9 T 22-04-2016 IPR002645 STAS domain SCD_RS09545 bf7da9be9f9025e0fe2e1b3a933b8166 232 Gene3D G3DSA:3.40.50.1360 7 217 2.1E-61 T 22-04-2016 SCD_RS09545 bf7da9be9f9025e0fe2e1b3a933b8166 232 PANTHER PTHR11054 10 201 9.7E-55 T 22-04-2016 SCD_RS09545 bf7da9be9f9025e0fe2e1b3a933b8166 232 SUPERFAMILY SSF100950 8 218 2.87E-55 T 22-04-2016 SCD_RS09545 bf7da9be9f9025e0fe2e1b3a933b8166 232 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 16 216 2.4E-60 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 SCD_RS09545 bf7da9be9f9025e0fe2e1b3a933b8166 232 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 12 203 4.7E-52 T 22-04-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 SCD_RS06765 ee5e72713daa5533eedd0bd522204497 212 SUPERFAMILY SSF52833 41 196 3.12E-46 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS06765 ee5e72713daa5533eedd0bd522204497 212 PANTHER PTHR12151 42 196 9.4E-58 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC SCD_RS06765 ee5e72713daa5533eedd0bd522204497 212 Gene3D G3DSA:3.40.30.10 13 196 3.6E-55 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS06765 ee5e72713daa5533eedd0bd522204497 212 Pfam PF02630 SCO1/SenC 29 178 1.2E-43 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC SCD_RS03595 2e9940fe0867684e40119f1dbbf71584 104 PANTHER PTHR34606:SF1 1 104 6.2E-43 T 22-04-2016 SCD_RS03595 2e9940fe0867684e40119f1dbbf71584 104 Pfam PF04972 BON domain 37 104 9.9E-22 T 22-04-2016 IPR007055 BON domain SCD_RS03595 2e9940fe0867684e40119f1dbbf71584 104 SMART SM00749 42 104 1.6E-8 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria SCD_RS03595 2e9940fe0867684e40119f1dbbf71584 104 PANTHER PTHR34606 1 104 6.2E-43 T 22-04-2016 SCD_RS04180 385647f260597d96cc5019b522bc726f 363 SUPERFAMILY SSF55821 4 206 2.75E-85 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SCD_RS04180 385647f260597d96cc5019b522bc726f 363 Gene3D G3DSA:3.90.870.10 1 211 6.0E-99 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SCD_RS04180 385647f260597d96cc5019b522bc726f 363 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 8.2E-83 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SCD_RS04180 385647f260597d96cc5019b522bc726f 363 Pfam PF00925 GTP cyclohydrolase II 207 359 1.1E-36 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SCD_RS04180 385647f260597d96cc5019b522bc726f 363 PIRSF PIRSF001259 1 362 2.0E-123 T 22-04-2016 SCD_RS04180 385647f260597d96cc5019b522bc726f 363 PANTHER PTHR21327 1 359 6.8E-143 T 22-04-2016 SCD_RS04180 385647f260597d96cc5019b522bc726f 363 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.285 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SCD_RS04180 385647f260597d96cc5019b522bc726f 363 SUPERFAMILY SSF142695 204 359 2.88E-46 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SCD_RS04180 385647f260597d96cc5019b522bc726f 363 PANTHER PTHR21327:SF6 1 359 6.8E-143 T 22-04-2016 SCD_RS04180 385647f260597d96cc5019b522bc726f 363 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 5 199 7.0E-74 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SCD_RS14000 67348dc649572510c23760160303d444 411 Gene3D G3DSA:3.40.190.10 187 331 5.7E-14 T 22-04-2016 SCD_RS14000 67348dc649572510c23760160303d444 411 Pfam PF12849 PBP superfamily domain 158 300 3.5E-7 T 22-04-2016 IPR024370 PBP domain SCD_RS14000 67348dc649572510c23760160303d444 411 SUPERFAMILY SSF53850 160 333 8.41E-12 T 22-04-2016 SCD_RS03420 6e8e54f0010a68b44506e504caac1eca 180 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 39 53 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SCD_RS03420 6e8e54f0010a68b44506e504caac1eca 180 PANTHER PTHR21600 3 105 7.9E-78 T 22-04-2016 SCD_RS03420 6e8e54f0010a68b44506e504caac1eca 180 PANTHER PTHR21600 123 179 7.9E-78 T 22-04-2016 SCD_RS03420 6e8e54f0010a68b44506e504caac1eca 180 Pfam PF00849 RNA pseudouridylate synthase 4 148 4.9E-14 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS03420 6e8e54f0010a68b44506e504caac1eca 180 PANTHER PTHR21600:SF23 3 105 7.9E-78 T 22-04-2016 SCD_RS03420 6e8e54f0010a68b44506e504caac1eca 180 PANTHER PTHR21600:SF23 123 179 7.9E-78 T 22-04-2016 SCD_RS03420 6e8e54f0010a68b44506e504caac1eca 180 SUPERFAMILY SSF55120 3 179 4.96E-44 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS03420 6e8e54f0010a68b44506e504caac1eca 180 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 8 179 1.3E-52 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SCD_RS00480 9e3a4c98519eb470b5bb6870cd5576d0 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 7.8E-66 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SCD_RS00480 9e3a4c98519eb470b5bb6870cd5576d0 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 7.8E-66 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SCD_RS00480 9e3a4c98519eb470b5bb6870cd5576d0 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 7.8E-66 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SCD_RS00480 9e3a4c98519eb470b5bb6870cd5576d0 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 7.8E-66 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SCD_RS00480 9e3a4c98519eb470b5bb6870cd5576d0 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 7.8E-66 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SCD_RS00480 9e3a4c98519eb470b5bb6870cd5576d0 347 Gene3D G3DSA:3.30.420.40 165 191 1.6E-33 T 22-04-2016 SCD_RS00480 9e3a4c98519eb470b5bb6870cd5576d0 347 Gene3D G3DSA:3.30.420.40 268 322 1.6E-33 T 22-04-2016 SCD_RS00480 9e3a4c98519eb470b5bb6870cd5576d0 347 PANTHER PTHR19375 9 331 4.4E-182 T 22-04-2016 SCD_RS00480 9e3a4c98519eb470b5bb6870cd5576d0 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 1.0E-160 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SCD_RS00480 9e3a4c98519eb470b5bb6870cd5576d0 347 Pfam PF06723 MreB/Mbl protein 10 340 3.8E-151 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SCD_RS00480 9e3a4c98519eb470b5bb6870cd5576d0 347 Gene3D G3DSA:3.30.420.40 10 164 1.9E-45 T 22-04-2016 SCD_RS00480 9e3a4c98519eb470b5bb6870cd5576d0 347 SUPERFAMILY SSF53067 9 153 2.73E-38 T 22-04-2016 SCD_RS00480 9e3a4c98519eb470b5bb6870cd5576d0 347 SUPERFAMILY SSF53067 155 337 1.65E-48 T 22-04-2016 SCD_RS00480 9e3a4c98519eb470b5bb6870cd5576d0 347 PANTHER PTHR19375:SF117 9 331 4.4E-182 T 22-04-2016 SCD_RS00480 9e3a4c98519eb470b5bb6870cd5576d0 347 Gene3D G3DSA:3.90.640.10 192 264 2.4E-31 T 22-04-2016 SCD_RS09590 51deb256537e345e2a09522d348a717c 102 SUPERFAMILY SSF46626 5 95 1.17E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS09590 51deb256537e345e2a09522d348a717c 102 Gene3D G3DSA:1.10.760.10 13 78 2.0E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS00090 b03475a6386106732b282b9bc1250627 322 Gene3D G3DSA:3.30.450.20 40 138 8.5E-11 T 22-04-2016 SCD_RS00090 b03475a6386106732b282b9bc1250627 322 SUPERFAMILY SSF103190 37 144 1.77E-9 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SCD_RS06235 d6cb8a804e1c92a5fd24017e3ebafd22 107 Gene3D G3DSA:2.60.300.12 2 97 3.2E-35 T 22-04-2016 IPR000361 FeS cluster biogenesis SCD_RS06235 d6cb8a804e1c92a5fd24017e3ebafd22 107 SUPERFAMILY SSF89360 1 96 1.24E-32 T 22-04-2016 IPR000361 FeS cluster biogenesis SCD_RS06235 d6cb8a804e1c92a5fd24017e3ebafd22 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 105 2.2E-51 T 22-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 SCD_RS06235 d6cb8a804e1c92a5fd24017e3ebafd22 107 PANTHER PTHR10072 1 104 5.7E-48 T 22-04-2016 SCD_RS06235 d6cb8a804e1c92a5fd24017e3ebafd22 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 4.0E-25 T 22-04-2016 IPR000361 FeS cluster biogenesis SCD_RS06235 d6cb8a804e1c92a5fd24017e3ebafd22 107 PANTHER PTHR10072:SF48 1 104 5.7E-48 T 22-04-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 SCD_RS06235 d6cb8a804e1c92a5fd24017e3ebafd22 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 105 7.3E-36 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 SCD_RS10745 68338aaa5f36188ea93134907b043a7a 311 PANTHER PTHR24078 85 300 1.3E-68 T 22-04-2016 SCD_RS10745 68338aaa5f36188ea93134907b043a7a 311 PANTHER PTHR24078 4 69 1.3E-68 T 22-04-2016 SCD_RS10745 68338aaa5f36188ea93134907b043a7a 311 SUPERFAMILY SSF46565 1 112 7.72E-32 T 22-04-2016 IPR001623 DnaJ domain SCD_RS10745 68338aaa5f36188ea93134907b043a7a 311 Gene3D G3DSA:2.60.260.20 209 283 5.2E-14 T 22-04-2016 SCD_RS10745 68338aaa5f36188ea93134907b043a7a 311 PRINTS PR00625 DnaJ domain signature 7 25 1.9E-25 T 22-04-2016 IPR001623 DnaJ domain SCD_RS10745 68338aaa5f36188ea93134907b043a7a 311 PRINTS PR00625 DnaJ domain signature 25 40 1.9E-25 T 22-04-2016 IPR001623 DnaJ domain SCD_RS10745 68338aaa5f36188ea93134907b043a7a 311 PRINTS PR00625 DnaJ domain signature 41 61 1.9E-25 T 22-04-2016 IPR001623 DnaJ domain SCD_RS10745 68338aaa5f36188ea93134907b043a7a 311 PRINTS PR00625 DnaJ domain signature 61 80 1.9E-25 T 22-04-2016 IPR001623 DnaJ domain SCD_RS10745 68338aaa5f36188ea93134907b043a7a 311 Pfam PF00226 DnaJ domain 5 66 3.7E-26 T 22-04-2016 IPR001623 DnaJ domain SCD_RS10745 68338aaa5f36188ea93134907b043a7a 311 Pfam PF01556 DnaJ C terminal domain 131 283 4.4E-32 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal SCD_RS10745 68338aaa5f36188ea93134907b043a7a 311 SUPERFAMILY SSF49493 123 212 9.16E-15 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SCD_RS10745 68338aaa5f36188ea93134907b043a7a 311 SUPERFAMILY SSF49493 212 294 3.14E-16 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SCD_RS10745 68338aaa5f36188ea93134907b043a7a 311 SMART SM00271 4 61 6.5E-29 T 22-04-2016 IPR001623 DnaJ domain SCD_RS10745 68338aaa5f36188ea93134907b043a7a 311 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 22-04-2016 IPR018253 DnaJ domain, conserved site SCD_RS10745 68338aaa5f36188ea93134907b043a7a 311 PANTHER PTHR24078:SF190 85 300 1.3E-68 T 22-04-2016 SCD_RS10745 68338aaa5f36188ea93134907b043a7a 311 PANTHER PTHR24078:SF190 4 69 1.3E-68 T 22-04-2016 SCD_RS10745 68338aaa5f36188ea93134907b043a7a 311 Gene3D G3DSA:1.10.287.110 1 113 3.2E-33 T 22-04-2016 IPR001623 DnaJ domain SCD_RS10745 68338aaa5f36188ea93134907b043a7a 311 Gene3D G3DSA:2.60.260.20 121 207 1.4E-16 T 22-04-2016 SCD_RS13080 b70ddbdc522f7aed8f774eb924250473 261 Pfam PF05751 FixH 147 256 6.4E-10 T 22-04-2016 IPR008620 Nitrogen fixation protein FixH SCD_RS13625 8846411261f73f4b06b94541eb4bfe36 254 Pfam PF00535 Glycosyl transferase family 2 10 141 1.8E-19 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SCD_RS13625 8846411261f73f4b06b94541eb4bfe36 254 SUPERFAMILY SSF53448 10 244 2.08E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS13625 8846411261f73f4b06b94541eb4bfe36 254 PANTHER PTHR10859 9 249 2.3E-56 T 22-04-2016 SCD_RS13625 8846411261f73f4b06b94541eb4bfe36 254 Gene3D G3DSA:3.90.550.10 10 218 4.7E-14 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS13625 8846411261f73f4b06b94541eb4bfe36 254 PANTHER PTHR10859:SF84 9 249 2.3E-56 T 22-04-2016 SCD_RS01520 8bd61addffa78b0b757e3e1cd9df2b8e 388 SUPERFAMILY SSF55973 4 111 1.37E-46 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SCD_RS01520 8bd61addffa78b0b757e3e1cd9df2b8e 388 Gene3D G3DSA:3.30.300.10 12 137 1.3E-46 T 22-04-2016 SCD_RS01520 8bd61addffa78b0b757e3e1cd9df2b8e 388 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 236 374 1.9E-69 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SCD_RS01520 8bd61addffa78b0b757e3e1cd9df2b8e 388 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 384 7.1E-188 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SCD_RS01520 8bd61addffa78b0b757e3e1cd9df2b8e 388 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 3.9E-42 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SCD_RS01520 8bd61addffa78b0b757e3e1cd9df2b8e 388 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 262 270 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SCD_RS01520 8bd61addffa78b0b757e3e1cd9df2b8e 388 Gene3D G3DSA:3.30.300.10 247 386 1.5E-70 T 22-04-2016 SCD_RS01520 8bd61addffa78b0b757e3e1cd9df2b8e 388 Gene3D G3DSA:3.30.300.10 138 236 4.3E-44 T 22-04-2016 SCD_RS01520 8bd61addffa78b0b757e3e1cd9df2b8e 388 Pfam PF02772 S-adenosylmethionine synthetase, central domain 117 234 1.0E-46 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SCD_RS01520 8bd61addffa78b0b757e3e1cd9df2b8e 388 PANTHER PTHR11964 6 381 5.1E-259 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SCD_RS01520 8bd61addffa78b0b757e3e1cd9df2b8e 388 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 119 129 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SCD_RS01520 8bd61addffa78b0b757e3e1cd9df2b8e 388 SUPERFAMILY SSF55973 236 385 1.65E-69 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SCD_RS01520 8bd61addffa78b0b757e3e1cd9df2b8e 388 PIRSF PIRSF000497 1 387 2.2E-175 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SCD_RS01520 8bd61addffa78b0b757e3e1cd9df2b8e 388 SUPERFAMILY SSF55973 117 235 5.89E-52 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SCD_RS01520 8bd61addffa78b0b757e3e1cd9df2b8e 388 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 386 58.166 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SCD_RS05450 b0328c28e678824b36d3c160058c33e8 688 SUPERFAMILY SSF141868 437 685 9.68E-90 T 22-04-2016 IPR001633 EAL domain SCD_RS05450 b0328c28e678824b36d3c160058c33e8 688 Pfam PF00672 HAMP domain 169 237 5.2E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS05450 b0328c28e678824b36d3c160058c33e8 688 Gene3D G3DSA:3.30.70.270 263 429 6.7E-56 T 22-04-2016 SCD_RS05450 b0328c28e678824b36d3c160058c33e8 688 Pfam PF00563 EAL domain 438 673 1.0E-72 T 22-04-2016 IPR001633 EAL domain SCD_RS05450 b0328c28e678824b36d3c160058c33e8 688 SMART SM00267 250 422 3.3E-64 T 22-04-2016 IPR000160 GGDEF domain SCD_RS05450 b0328c28e678824b36d3c160058c33e8 688 Gene3D G3DSA:3.20.20.450 435 686 3.2E-101 T 22-04-2016 IPR001633 EAL domain SCD_RS05450 b0328c28e678824b36d3c160058c33e8 688 Pfam PF17152 Periplasmic sensor domain 45 150 6.6E-22 T 22-04-2016 IPR033417 Periplasmic sensor domain CHASE8 UniPathway: UPA00599 SCD_RS05450 b0328c28e678824b36d3c160058c33e8 688 Pfam PF00990 Diguanylate cyclase, GGDEF domain 261 417 8.2E-49 T 22-04-2016 IPR000160 GGDEF domain SCD_RS05450 b0328c28e678824b36d3c160058c33e8 688 SMART SM00304 188 241 6.6E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS05450 b0328c28e678824b36d3c160058c33e8 688 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 257 421 1.3E-45 T 22-04-2016 IPR000160 GGDEF domain SCD_RS05450 b0328c28e678824b36d3c160058c33e8 688 PANTHER PTHR10799:SF774 141 512 2.2E-92 T 22-04-2016 SCD_RS05450 b0328c28e678824b36d3c160058c33e8 688 PANTHER PTHR10799:SF774 631 650 2.2E-92 T 22-04-2016 SCD_RS05450 b0328c28e678824b36d3c160058c33e8 688 SUPERFAMILY SSF55073 267 422 1.02E-49 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS05450 b0328c28e678824b36d3c160058c33e8 688 PANTHER PTHR10799 141 512 2.2E-92 T 22-04-2016 SCD_RS05450 b0328c28e678824b36d3c160058c33e8 688 PANTHER PTHR10799 631 650 2.2E-92 T 22-04-2016 SCD_RS05450 b0328c28e678824b36d3c160058c33e8 688 SUPERFAMILY SSF158472 190 238 1.83E-7 T 22-04-2016 SCD_RS05450 b0328c28e678824b36d3c160058c33e8 688 SMART SM00052 432 678 9.0E-124 T 22-04-2016 IPR001633 EAL domain SCD_RS07340 85e4a5676c4b462ee829941762a861d7 366 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 149 309 5.3E-51 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SCD_RS07340 85e4a5676c4b462ee829941762a861d7 366 PANTHER PTHR21600 82 345 1.5E-83 T 22-04-2016 SCD_RS07340 85e4a5676c4b462ee829941762a861d7 366 Pfam PF00849 RNA pseudouridylate synthase 145 278 9.6E-14 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS07340 85e4a5676c4b462ee829941762a861d7 366 SMART SM00363 82 141 3.2E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS07340 85e4a5676c4b462ee829941762a861d7 366 SUPERFAMILY SSF55174 83 175 1.7E-17 T 22-04-2016 SCD_RS07340 85e4a5676c4b462ee829941762a861d7 366 Gene3D G3DSA:3.10.290.10 83 137 1.7E-17 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS07340 85e4a5676c4b462ee829941762a861d7 366 PANTHER PTHR21600:SF2 82 345 1.5E-83 T 22-04-2016 SCD_RS07340 85e4a5676c4b462ee829941762a861d7 366 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 183 197 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SCD_RS07340 85e4a5676c4b462ee829941762a861d7 366 Pfam PF01479 S4 domain 83 127 7.5E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS07340 85e4a5676c4b462ee829941762a861d7 366 SUPERFAMILY SSF55120 144 313 4.16E-41 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS01140 3f4420fb3c3ccb1508c158b44d7dd54c 217 PANTHER PTHR32039 1 212 1.3E-112 T 22-04-2016 SCD_RS01140 3f4420fb3c3ccb1508c158b44d7dd54c 217 Gene3D G3DSA:3.40.50.300 4 107 2.3E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS01140 3f4420fb3c3ccb1508c158b44d7dd54c 217 PANTHER PTHR32039:SF7 1 212 1.3E-112 T 22-04-2016 IPR004482 Mg chelatase-related protein SCD_RS01140 3f4420fb3c3ccb1508c158b44d7dd54c 217 Pfam PF01078 Magnesium chelatase, subunit ChlI 2 112 1.4E-52 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain SCD_RS01140 3f4420fb3c3ccb1508c158b44d7dd54c 217 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 121 212 1.4E-32 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain SCD_RS01140 3f4420fb3c3ccb1508c158b44d7dd54c 217 SUPERFAMILY SSF52540 5 213 9.81E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13320 3cd28fc1a0bf9a61a715214405b3d58f 137 SUPERFAMILY SSF52821 15 135 1.13E-35 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS13320 3cd28fc1a0bf9a61a715214405b3d58f 137 SMART SM00450 38 134 1.3E-26 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS13320 3cd28fc1a0bf9a61a715214405b3d58f 137 PANTHER PTHR12231:SF138 1 137 5.0E-27 T 22-04-2016 SCD_RS13320 3cd28fc1a0bf9a61a715214405b3d58f 137 PANTHER PTHR12231 1 137 5.0E-27 T 22-04-2016 SCD_RS13320 3cd28fc1a0bf9a61a715214405b3d58f 137 Pfam PF00581 Rhodanese-like domain 42 130 1.8E-18 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS13320 3cd28fc1a0bf9a61a715214405b3d58f 137 Gene3D G3DSA:3.40.250.10 21 137 4.4E-34 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS01660 125e5bd0c6291bda5ff232e8ed7a5d64 471 SMART SM00387 371 465 6.6E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS01660 125e5bd0c6291bda5ff232e8ed7a5d64 471 SUPERFAMILY SSF55874 339 463 3.54E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS01660 125e5bd0c6291bda5ff232e8ed7a5d64 471 Pfam PF07730 Histidine kinase 266 329 2.2E-7 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SCD_RS01660 125e5bd0c6291bda5ff232e8ed7a5d64 471 Gene3D G3DSA:3.30.565.10 337 466 3.9E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS01660 125e5bd0c6291bda5ff232e8ed7a5d64 471 PANTHER PTHR24421 11 467 7.8E-33 T 22-04-2016 SCD_RS01660 125e5bd0c6291bda5ff232e8ed7a5d64 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 421 2.6E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS01660 125e5bd0c6291bda5ff232e8ed7a5d64 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 443 2.6E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS01660 125e5bd0c6291bda5ff232e8ed7a5d64 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 462 2.6E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS01660 125e5bd0c6291bda5ff232e8ed7a5d64 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 374 464 2.7E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS01660 125e5bd0c6291bda5ff232e8ed7a5d64 471 PANTHER PTHR24421:SF23 11 467 7.8E-33 T 22-04-2016 SCD_RS12460 ffbef1a73c87d4860f9cabaf6e963ff6 342 Gene3D G3DSA:3.40.50.720 1 157 5.9E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS12460 ffbef1a73c87d4860f9cabaf6e963ff6 342 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 141 2.1E-38 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SCD_RS12460 ffbef1a73c87d4860f9cabaf6e963ff6 342 PANTHER PTHR32338 1 342 1.5E-175 T 22-04-2016 SCD_RS12460 ffbef1a73c87d4860f9cabaf6e963ff6 342 PANTHER PTHR32338:SF8 1 342 1.5E-175 T 22-04-2016 SCD_RS12460 ffbef1a73c87d4860f9cabaf6e963ff6 342 SMART SM00859 3 141 1.7E-62 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SCD_RS12460 ffbef1a73c87d4860f9cabaf6e963ff6 342 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 22-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SCD_RS12460 ffbef1a73c87d4860f9cabaf6e963ff6 342 SUPERFAMILY SSF55347 149 310 2.35E-51 T 22-04-2016 SCD_RS12460 ffbef1a73c87d4860f9cabaf6e963ff6 342 Gene3D G3DSA:3.30.360.10 158 310 1.9E-58 T 22-04-2016 SCD_RS12460 ffbef1a73c87d4860f9cabaf6e963ff6 342 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 336 42.599 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SCD_RS12460 ffbef1a73c87d4860f9cabaf6e963ff6 342 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 342 9.6E-129 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SCD_RS12460 ffbef1a73c87d4860f9cabaf6e963ff6 342 SUPERFAMILY SSF51735 2 170 1.35E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS12460 ffbef1a73c87d4860f9cabaf6e963ff6 342 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 160 313 4.4E-19 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SCD_RS13775 b10f28897244fe8ac4efbd691b372fd3 296 PANTHER PTHR18895 16 296 2.1E-94 T 22-04-2016 SCD_RS13775 b10f28897244fe8ac4efbd691b372fd3 296 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 295 4.4E-91 T 22-04-2016 SCD_RS13775 b10f28897244fe8ac4efbd691b372fd3 296 SUPERFAMILY SSF53335 69 292 1.13E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS13775 b10f28897244fe8ac4efbd691b372fd3 296 PIRSF PIRSF000401 1 296 1.4E-96 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SCD_RS13775 b10f28897244fe8ac4efbd691b372fd3 296 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 295 31.347 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SCD_RS13775 b10f28897244fe8ac4efbd691b372fd3 296 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 289 3.3E-70 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SCD_RS13775 b10f28897244fe8ac4efbd691b372fd3 296 Gene3D G3DSA:3.40.50.150 107 290 2.2E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS13775 b10f28897244fe8ac4efbd691b372fd3 296 PANTHER PTHR18895:SF69 16 296 2.1E-94 T 22-04-2016 SCD_RS01985 5c0b587426c47316e14f10768f0afeba 757 SUPERFAMILY SSF55073 335 494 3.84E-43 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS01985 5c0b587426c47316e14f10768f0afeba 757 Pfam PF00563 EAL domain 511 741 1.0E-53 T 22-04-2016 IPR001633 EAL domain SCD_RS01985 5c0b587426c47316e14f10768f0afeba 757 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 329 491 1.8E-40 T 22-04-2016 IPR000160 GGDEF domain SCD_RS01985 5c0b587426c47316e14f10768f0afeba 757 PANTHER PTHR33121 520 744 1.7E-44 T 22-04-2016 SCD_RS01985 5c0b587426c47316e14f10768f0afeba 757 Gene3D G3DSA:3.20.20.450 515 743 1.6E-56 T 22-04-2016 IPR001633 EAL domain SCD_RS01985 5c0b587426c47316e14f10768f0afeba 757 Pfam PF00990 Diguanylate cyclase, GGDEF domain 330 487 9.1E-40 T 22-04-2016 IPR000160 GGDEF domain SCD_RS01985 5c0b587426c47316e14f10768f0afeba 757 PANTHER PTHR33121:SF10 520 744 1.7E-44 T 22-04-2016 SCD_RS01985 5c0b587426c47316e14f10768f0afeba 757 SMART SM00052 504 746 2.0E-35 T 22-04-2016 IPR001633 EAL domain SCD_RS01985 5c0b587426c47316e14f10768f0afeba 757 SMART SM00267 319 492 1.0E-51 T 22-04-2016 IPR000160 GGDEF domain SCD_RS01985 5c0b587426c47316e14f10768f0afeba 757 SUPERFAMILY SSF141868 518 742 6.02E-56 T 22-04-2016 IPR001633 EAL domain SCD_RS01985 5c0b587426c47316e14f10768f0afeba 757 Gene3D G3DSA:3.30.70.270 332 498 3.5E-49 T 22-04-2016 SCD_RS02105 d7639b36f4fc32da75214f95ca6ea325 472 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 85 99 - T 22-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SCD_RS02105 d7639b36f4fc32da75214f95ca6ea325 472 SUPERFAMILY SSF51735 233 392 5.74E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS02105 d7639b36f4fc32da75214f95ca6ea325 472 Gene3D G3DSA:3.40.50.1480 393 472 2.2E-35 T 22-04-2016 SCD_RS02105 d7639b36f4fc32da75214f95ca6ea325 472 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 13 471 8.8E-145 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SCD_RS02105 d7639b36f4fc32da75214f95ca6ea325 472 Gene3D G3DSA:3.40.50.720 272 371 4.5E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS02105 d7639b36f4fc32da75214f95ca6ea325 472 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 9 464 48.703 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SCD_RS02105 d7639b36f4fc32da75214f95ca6ea325 472 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 233 392 2.4E-82 T 22-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SCD_RS02105 d7639b36f4fc32da75214f95ca6ea325 472 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 15 464 1.6E-188 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SCD_RS02105 d7639b36f4fc32da75214f95ca6ea325 472 PANTHER PTHR23420 183 472 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SCD_RS02105 d7639b36f4fc32da75214f95ca6ea325 472 PANTHER PTHR23420 1 147 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SCD_RS02105 d7639b36f4fc32da75214f95ca6ea325 472 SMART SM00997 233 392 5.4E-112 T 22-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SCD_RS02105 d7639b36f4fc32da75214f95ca6ea325 472 PIRSF PIRSF001109 2 472 5.1E-191 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SCD_RS02105 d7639b36f4fc32da75214f95ca6ea325 472 Gene3D G3DSA:3.40.50.1480 184 271 3.8E-122 T 22-04-2016 SCD_RS02105 d7639b36f4fc32da75214f95ca6ea325 472 Gene3D G3DSA:3.40.50.1480 10 148 3.8E-122 T 22-04-2016 SCD_RS02105 d7639b36f4fc32da75214f95ca6ea325 472 SUPERFAMILY SSF52283 11 149 2.15E-113 T 22-04-2016 SCD_RS02105 d7639b36f4fc32da75214f95ca6ea325 472 SUPERFAMILY SSF52283 185 232 2.15E-113 T 22-04-2016 SCD_RS02105 d7639b36f4fc32da75214f95ca6ea325 472 SUPERFAMILY SSF52283 393 472 2.15E-113 T 22-04-2016 SCD_RS02105 d7639b36f4fc32da75214f95ca6ea325 472 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 255 271 - T 22-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SCD_RS02105 d7639b36f4fc32da75214f95ca6ea325 472 SMART SM00996 13 471 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 SCD_RS12615 6397a512594c7e4641438b5a161ac38a 323 Gene3D G3DSA:3.40.50.300 5 178 7.8E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12615 6397a512594c7e4641438b5a161ac38a 323 Gene3D G3DSA:1.10.8.60 179 257 1.8E-23 T 22-04-2016 SCD_RS12615 6397a512594c7e4641438b5a161ac38a 323 PANTHER PTHR32071 4 311 4.6E-144 T 22-04-2016 SCD_RS12615 6397a512594c7e4641438b5a161ac38a 323 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 294 314 1.2E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS12615 6397a512594c7e4641438b5a161ac38a 323 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 277 294 1.2E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS12615 6397a512594c7e4641438b5a161ac38a 323 Pfam PF00158 Sigma-54 interaction domain 6 172 3.4E-63 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SCD_RS12615 6397a512594c7e4641438b5a161ac38a 323 SMART SM00382 26 169 1.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS12615 6397a512594c7e4641438b5a161ac38a 323 SUPERFAMILY SSF52540 6 238 1.25E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12615 6397a512594c7e4641438b5a161ac38a 323 Pfam PF02954 Bacterial regulatory protein, Fis family 271 311 6.2E-17 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS12615 6397a512594c7e4641438b5a161ac38a 323 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 92 107 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SCD_RS12615 6397a512594c7e4641438b5a161ac38a 323 SUPERFAMILY SSF46689 219 311 1.76E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS12615 6397a512594c7e4641438b5a161ac38a 323 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 30 43 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SCD_RS12615 6397a512594c7e4641438b5a161ac38a 323 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SCD_RS12615 6397a512594c7e4641438b5a161ac38a 323 Gene3D G3DSA:1.10.10.60 260 311 9.6E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS00035 fa768c283654e3313210eb6815833787 152 Pfam PF04361 Protein of unknown function (DUF494) 1 152 2.7E-56 T 22-04-2016 IPR007456 Smg SCD_RS00035 fa768c283654e3313210eb6815833787 152 Hamap MF_00598 Protein Smg [smg]. 1 152 26.723 T 22-04-2016 IPR007456 Smg SCD_RS00035 fa768c283654e3313210eb6815833787 152 PANTHER PTHR38692:SF1 1 152 9.1E-40 T 22-04-2016 SCD_RS00035 fa768c283654e3313210eb6815833787 152 PANTHER PTHR38692 1 152 9.1E-40 T 22-04-2016 SCD_RS05600 f42d1444957231917814ea514815c11f 301 PANTHER PTHR36838 1 301 4.5E-59 T 22-04-2016 SCD_RS05600 f42d1444957231917814ea514815c11f 301 PANTHER PTHR36838:SF1 1 301 4.5E-59 T 22-04-2016 SCD_RS05600 f42d1444957231917814ea514815c11f 301 Pfam PF03547 Membrane transport protein 154 294 8.1E-10 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 SCD_RS05600 f42d1444957231917814ea514815c11f 301 Pfam PF03547 Membrane transport protein 5 139 8.5E-9 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 SCD_RS02775 54db206552e103eebfb19e8c1b1245c3 200 Gene3D G3DSA:2.60.450.10 28 172 3.0E-36 T 22-04-2016 SCD_RS02775 54db206552e103eebfb19e8c1b1245c3 200 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 28 175 3.8E-47 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 SCD_RS02775 54db206552e103eebfb19e8c1b1245c3 200 Pfam PF03968 OstA-like protein 39 149 5.7E-29 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal SCD_RS02775 54db206552e103eebfb19e8c1b1245c3 200 PANTHER PTHR36504 1 193 4.8E-27 T 22-04-2016 SCD_RS02775 54db206552e103eebfb19e8c1b1245c3 200 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 5 175 26.394 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 SCD_RS15680 032019c73dee0ff26a26707e0b5fc5c0 625 Gene3D G3DSA:1.20.1330.10 530 575 1.8E-22 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SCD_RS15680 032019c73dee0ff26a26707e0b5fc5c0 625 Gene3D G3DSA:1.20.1330.10 59 168 1.8E-22 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SCD_RS15680 032019c73dee0ff26a26707e0b5fc5c0 625 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 230 3.9E-66 T 22-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 SCD_RS15680 032019c73dee0ff26a26707e0b5fc5c0 625 SUPERFAMILY SSF64518 1 336 1.96E-51 T 22-04-2016 SCD_RS15680 032019c73dee0ff26a26707e0b5fc5c0 625 PANTHER PTHR30244 1 185 7.3E-73 T 22-04-2016 SCD_RS15680 032019c73dee0ff26a26707e0b5fc5c0 625 PANTHER PTHR30244 453 625 7.3E-73 T 22-04-2016 SCD_RS15680 032019c73dee0ff26a26707e0b5fc5c0 625 SUPERFAMILY SSF64518 454 625 6.28E-27 T 22-04-2016 SCD_RS15680 032019c73dee0ff26a26707e0b5fc5c0 625 PANTHER PTHR30244:SF5 1 185 7.3E-73 T 22-04-2016 SCD_RS15680 032019c73dee0ff26a26707e0b5fc5c0 625 PANTHER PTHR30244:SF5 453 625 7.3E-73 T 22-04-2016 SCD_RS15680 032019c73dee0ff26a26707e0b5fc5c0 625 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 3.6E-20 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SCD_RS00430 a9546ae10a4be11e425fceecf0dc5217 194 Pfam PF07021 Methionine biosynthesis protein MetW 4 190 3.0E-74 T 22-04-2016 IPR010743 Methionine biosynthesis MetW SCD_RS00430 a9546ae10a4be11e425fceecf0dc5217 194 Gene3D G3DSA:3.40.50.150 10 168 3.6E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS00430 a9546ae10a4be11e425fceecf0dc5217 194 SUPERFAMILY SSF53335 8 172 1.02E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS00430 a9546ae10a4be11e425fceecf0dc5217 194 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 4 191 3.8E-77 T 22-04-2016 IPR010743 Methionine biosynthesis MetW SCD_RS00430 a9546ae10a4be11e425fceecf0dc5217 194 PANTHER PTHR10108 1 167 1.1E-49 T 22-04-2016 SCD_RS00430 a9546ae10a4be11e425fceecf0dc5217 194 PANTHER PTHR10108:SF831 1 167 1.1E-49 T 22-04-2016 SCD_RS05060 f75c45b4f6a334548fd3603d67662c71 216 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 88 179 4.9E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SCD_RS05060 f75c45b4f6a334548fd3603d67662c71 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 87 182 1.2E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SCD_RS05060 f75c45b4f6a334548fd3603d67662c71 216 PANTHER PTHR18901:SF24 2 215 1.4E-86 T 22-04-2016 SCD_RS05060 f75c45b4f6a334548fd3603d67662c71 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 183 8.9E-36 T 22-04-2016 IPR023214 HAD-like domain SCD_RS05060 f75c45b4f6a334548fd3603d67662c71 216 Gene3D G3DSA:1.10.150.240 19 81 1.9E-5 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SCD_RS05060 f75c45b4f6a334548fd3603d67662c71 216 SUPERFAMILY SSF56784 1 215 4.07E-59 T 22-04-2016 IPR023214 HAD-like domain SCD_RS05060 f75c45b4f6a334548fd3603d67662c71 216 PANTHER PTHR18901 2 215 1.4E-86 T 22-04-2016 SCD_RS05060 f75c45b4f6a334548fd3603d67662c71 216 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 5 198 1.1E-53 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 SCD_RS05060 f75c45b4f6a334548fd3603d67662c71 216 Gene3D G3DSA:3.40.50.1000 1 18 4.4E-43 T 22-04-2016 IPR023214 HAD-like domain SCD_RS05060 f75c45b4f6a334548fd3603d67662c71 216 Gene3D G3DSA:3.40.50.1000 82 214 4.4E-43 T 22-04-2016 IPR023214 HAD-like domain SCD_RS02500 9403db6fb8e3863c16cfa3daf3f3dbc3 152 Pfam PF01322 Cytochrome C' 105 150 3.5E-7 T 22-04-2016 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 SCD_RS02500 9403db6fb8e3863c16cfa3daf3f3dbc3 152 Gene3D G3DSA:1.20.120.10 109 151 5.3E-8 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 SCD_RS02500 9403db6fb8e3863c16cfa3daf3f3dbc3 152 SUPERFAMILY SSF47175 46 152 1.77E-12 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 SCD_RS04725 1f9f0ba66865a116cc79d94709f442a8 658 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 112 132 7.3E-67 T 22-04-2016 SCD_RS04725 1f9f0ba66865a116cc79d94709f442a8 658 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 235 256 7.3E-67 T 22-04-2016 SCD_RS04725 1f9f0ba66865a116cc79d94709f442a8 658 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 159 180 7.3E-67 T 22-04-2016 SCD_RS04725 1f9f0ba66865a116cc79d94709f442a8 658 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 257 283 7.3E-67 T 22-04-2016 SCD_RS04725 1f9f0ba66865a116cc79d94709f442a8 658 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 325 337 7.3E-67 T 22-04-2016 SCD_RS04725 1f9f0ba66865a116cc79d94709f442a8 658 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 84 109 7.3E-67 T 22-04-2016 SCD_RS04725 1f9f0ba66865a116cc79d94709f442a8 658 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 430 449 7.3E-67 T 22-04-2016 SCD_RS04725 1f9f0ba66865a116cc79d94709f442a8 658 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 7 655 1.1E-245 T 22-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 SCD_RS04725 1f9f0ba66865a116cc79d94709f442a8 658 PANTHER PTHR22773 1 608 1.4E-261 T 22-04-2016 SCD_RS04725 1f9f0ba66865a116cc79d94709f442a8 658 Pfam PF00361 Proton-conducting membrane transporter 135 419 4.8E-83 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SCD_RS04725 1f9f0ba66865a116cc79d94709f442a8 658 PANTHER PTHR22773:SF50 1 608 1.4E-261 T 22-04-2016 SCD_RS04725 1f9f0ba66865a116cc79d94709f442a8 658 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 66 123 6.2E-27 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal SCD_RS04725 1f9f0ba66865a116cc79d94709f442a8 658 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 429 451 1.2E-11 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SCD_RS04725 1f9f0ba66865a116cc79d94709f442a8 658 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 36 55 1.2E-11 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SCD_RS04725 1f9f0ba66865a116cc79d94709f442a8 658 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 275 297 1.2E-11 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SCD_RS04725 1f9f0ba66865a116cc79d94709f442a8 658 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 86 106 1.2E-11 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SCD_RS01050 958a98ab219ece175dc0e16137d3eb1f 186 Gene3D G3DSA:3.40.1740.10 3 43 4.6E-33 T 22-04-2016 SCD_RS01050 958a98ab219ece175dc0e16137d3eb1f 186 Gene3D G3DSA:3.40.1740.10 130 177 4.6E-33 T 22-04-2016 SCD_RS01050 958a98ab219ece175dc0e16137d3eb1f 186 Pfam PF02622 Uncharacterized ACR, COG1678 15 173 1.5E-48 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 SCD_RS01050 958a98ab219ece175dc0e16137d3eb1f 186 PANTHER PTHR30327:SF1 4 186 1.2E-53 T 22-04-2016 SCD_RS01050 958a98ab219ece175dc0e16137d3eb1f 186 SUPERFAMILY SSF143456 4 186 1.57E-62 T 22-04-2016 SCD_RS01050 958a98ab219ece175dc0e16137d3eb1f 186 PANTHER PTHR30327 4 186 1.2E-53 T 22-04-2016 SCD_RS01050 958a98ab219ece175dc0e16137d3eb1f 186 Gene3D G3DSA:3.30.70.1300 44 129 1.5E-28 T 22-04-2016 SCD_RS01050 958a98ab219ece175dc0e16137d3eb1f 186 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 4 186 37.401 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 SCD_RS12430 36ef56ec7439e9ac8c4501ab6ebf796d 399 PANTHER PTHR11766 4 398 2.3E-219 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 SCD_RS12430 36ef56ec7439e9ac8c4501ab6ebf796d 399 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 398 47.911 T 22-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 SCD_RS12430 36ef56ec7439e9ac8c4501ab6ebf796d 399 SUPERFAMILY SSF52374 5 316 2.1E-95 T 22-04-2016 SCD_RS12430 36ef56ec7439e9ac8c4501ab6ebf796d 399 Gene3D G3DSA:3.10.290.10 326 398 2.3E-23 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS12430 36ef56ec7439e9ac8c4501ab6ebf796d 399 Gene3D G3DSA:3.40.50.620 9 227 4.0E-84 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS12430 36ef56ec7439e9ac8c4501ab6ebf796d 399 PANTHER PTHR11766:SF1 4 398 2.3E-219 T 22-04-2016 SCD_RS12430 36ef56ec7439e9ac8c4501ab6ebf796d 399 Pfam PF00579 tRNA synthetases class I (W and Y) 32 316 3.4E-79 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS12430 36ef56ec7439e9ac8c4501ab6ebf796d 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 7.8E-27 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SCD_RS12430 36ef56ec7439e9ac8c4501ab6ebf796d 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 7.8E-27 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SCD_RS12430 36ef56ec7439e9ac8c4501ab6ebf796d 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 7.8E-27 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SCD_RS12430 36ef56ec7439e9ac8c4501ab6ebf796d 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 7.8E-27 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SCD_RS12430 36ef56ec7439e9ac8c4501ab6ebf796d 399 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS12430 36ef56ec7439e9ac8c4501ab6ebf796d 399 Gene3D G3DSA:1.10.240.10 228 325 4.8E-34 T 22-04-2016 SCD_RS12430 36ef56ec7439e9ac8c4501ab6ebf796d 399 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 398 7.2E-119 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SCD_RS12430 36ef56ec7439e9ac8c4501ab6ebf796d 399 SUPERFAMILY SSF55174 320 398 1.34E-16 T 22-04-2016 SCD_RS12485 0ad5727afdeef6e612d2aafc2717e1e2 413 Pfam PF02754 Cysteine-rich domain 298 382 2.0E-10 T 22-04-2016 IPR004017 Cysteine-rich domain SCD_RS12485 0ad5727afdeef6e612d2aafc2717e1e2 413 Pfam PF02754 Cysteine-rich domain 180 263 2.0E-9 T 22-04-2016 IPR004017 Cysteine-rich domain SCD_RS12485 0ad5727afdeef6e612d2aafc2717e1e2 413 Pfam PF13183 4Fe-4S dicluster domain 17 84 3.0E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS12485 0ad5727afdeef6e612d2aafc2717e1e2 413 SUPERFAMILY SSF54862 17 112 1.93E-17 T 22-04-2016 SCD_RS12485 0ad5727afdeef6e612d2aafc2717e1e2 413 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 70 81 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS12485 0ad5727afdeef6e612d2aafc2717e1e2 413 PANTHER PTHR32479:SF2 8 397 4.0E-88 T 22-04-2016 SCD_RS12485 0ad5727afdeef6e612d2aafc2717e1e2 413 PIRSF PIRSF000139 4 411 6.1E-114 T 22-04-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit SCD_RS12485 0ad5727afdeef6e612d2aafc2717e1e2 413 Gene3D G3DSA:1.10.1060.10 15 99 3.6E-18 T 22-04-2016 SCD_RS12485 0ad5727afdeef6e612d2aafc2717e1e2 413 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 19 30 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS12485 0ad5727afdeef6e612d2aafc2717e1e2 413 PANTHER PTHR32479 8 397 4.0E-88 T 22-04-2016 SCD_RS13045 02f940c36523e7f35231bcf79cfd0d1b 458 SUPERFAMILY SSF63411 23 230 4.5E-64 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SCD_RS13045 02f940c36523e7f35231bcf79cfd0d1b 458 Pfam PF00675 Insulinase (Peptidase family M16) 37 182 3.7E-29 T 22-04-2016 IPR011765 Peptidase M16, N-terminal SCD_RS13045 02f940c36523e7f35231bcf79cfd0d1b 458 Pfam PF05193 Peptidase M16 inactive domain 190 372 4.8E-32 T 22-04-2016 IPR007863 Peptidase M16, C-terminal SCD_RS13045 02f940c36523e7f35231bcf79cfd0d1b 458 SUPERFAMILY SSF63411 252 439 1.75E-36 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SCD_RS13045 02f940c36523e7f35231bcf79cfd0d1b 458 Gene3D G3DSA:3.30.830.10 250 437 2.1E-31 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SCD_RS13045 02f940c36523e7f35231bcf79cfd0d1b 458 PANTHER PTHR11851:SF136 15 443 1.7E-114 T 22-04-2016 SCD_RS13045 02f940c36523e7f35231bcf79cfd0d1b 458 Gene3D G3DSA:3.30.830.10 24 247 2.9E-62 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SCD_RS13045 02f940c36523e7f35231bcf79cfd0d1b 458 PANTHER PTHR11851 15 443 1.7E-114 T 22-04-2016 SCD_RS13045 02f940c36523e7f35231bcf79cfd0d1b 458 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 57 80 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 SCD_RS01730 4712ebd3772f773c8e0d8399112001f5 105 Gene3D G3DSA:1.10.760.10 20 103 2.3E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01730 4712ebd3772f773c8e0d8399112001f5 105 Pfam PF00034 Cytochrome c 24 104 6.5E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01730 4712ebd3772f773c8e0d8399112001f5 105 SUPERFAMILY SSF46626 10 102 1.58E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01730 4712ebd3772f773c8e0d8399112001f5 105 PANTHER PTHR33751:SF3 26 105 1.6E-18 T 22-04-2016 SCD_RS01730 4712ebd3772f773c8e0d8399112001f5 105 PANTHER PTHR33751 26 105 1.6E-18 T 22-04-2016 SCD_RS04130 987795213170e2382bf3e11d3152961e 421 Gene3D G3DSA:1.20.1600.10 10 410 1.7E-37 T 22-04-2016 SCD_RS04130 987795213170e2382bf3e11d3152961e 421 SUPERFAMILY SSF56954 4 411 8.63E-48 T 22-04-2016 SCD_RS04130 987795213170e2382bf3e11d3152961e 421 Pfam PF02321 Outer membrane efflux protein 228 407 7.2E-17 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SCD_RS04130 987795213170e2382bf3e11d3152961e 421 Pfam PF02321 Outer membrane efflux protein 19 203 3.1E-20 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SCD_RS08500 1be2ee57db631ead3f8cdebcbf042bcc 490 SMART SM00316 135 201 3.7E-8 T 22-04-2016 IPR022967 RNA-binding domain, S1 SCD_RS08500 1be2ee57db631ead3f8cdebcbf042bcc 490 PANTHER PTHR22648 1 447 7.2E-163 T 22-04-2016 SCD_RS08500 1be2ee57db631ead3f8cdebcbf042bcc 490 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 343 5.5E-126 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 SCD_RS08500 1be2ee57db631ead3f8cdebcbf042bcc 490 Pfam PF00575 S1 RNA binding domain 140 196 2.7E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 SCD_RS08500 1be2ee57db631ead3f8cdebcbf042bcc 490 Pfam PF08529 NusA N-terminal domain 4 126 7.5E-38 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SCD_RS08500 1be2ee57db631ead3f8cdebcbf042bcc 490 Gene3D G3DSA:2.40.50.140 139 199 1.4E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS08500 1be2ee57db631ead3f8cdebcbf042bcc 490 SUPERFAMILY SSF47794 429 489 3.3E-14 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 SCD_RS08500 1be2ee57db631ead3f8cdebcbf042bcc 490 Gene3D G3DSA:3.30.300.20 280 348 5.5E-30 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SCD_RS08500 1be2ee57db631ead3f8cdebcbf042bcc 490 Pfam PF14520 Helix-hairpin-helix domain 431 485 4.8E-9 T 22-04-2016 SCD_RS08500 1be2ee57db631ead3f8cdebcbf042bcc 490 Gene3D G3DSA:1.10.150.20 357 421 2.1E-21 T 22-04-2016 SCD_RS08500 1be2ee57db631ead3f8cdebcbf042bcc 490 Gene3D G3DSA:1.10.150.20 429 489 1.6E-20 T 22-04-2016 SCD_RS08500 1be2ee57db631ead3f8cdebcbf042bcc 490 SUPERFAMILY SSF47794 350 415 5.02E-15 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 SCD_RS08500 1be2ee57db631ead3f8cdebcbf042bcc 490 SUPERFAMILY SSF50249 136 200 8.99E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS08500 1be2ee57db631ead3f8cdebcbf042bcc 490 PANTHER PTHR22648:SF0 1 447 7.2E-163 T 22-04-2016 SCD_RS08500 1be2ee57db631ead3f8cdebcbf042bcc 490 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 439 488 1.1E-16 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication SCD_RS08500 1be2ee57db631ead3f8cdebcbf042bcc 490 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 366 415 1.9E-19 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication SCD_RS08500 1be2ee57db631ead3f8cdebcbf042bcc 490 SUPERFAMILY SSF69705 1 128 5.89E-39 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SCD_RS08500 1be2ee57db631ead3f8cdebcbf042bcc 490 SUPERFAMILY SSF54814 280 344 2.42E-14 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SCD_RS08500 1be2ee57db631ead3f8cdebcbf042bcc 490 Gene3D G3DSA:3.30.1480.10 1 127 2.5E-43 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SCD_RS08500 1be2ee57db631ead3f8cdebcbf042bcc 490 Pfam PF13184 NusA-like KH domain 231 298 1.2E-27 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 SCD_RS08500 1be2ee57db631ead3f8cdebcbf042bcc 490 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 411 29.653 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 SCD_RS08500 1be2ee57db631ead3f8cdebcbf042bcc 490 SUPERFAMILY SSF54814 203 278 3.99E-29 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SCD_RS08500 1be2ee57db631ead3f8cdebcbf042bcc 490 Gene3D G3DSA:3.30.300.20 201 278 5.5E-34 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SCD_RS12325 f398d704cdd0074523c86e37b980da60 312 SUPERFAMILY SSF81799 113 212 1.57E-33 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SCD_RS12325 f398d704cdd0074523c86e37b980da60 312 Gene3D G3DSA:1.10.150.170 113 214 6.2E-37 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SCD_RS12325 f398d704cdd0074523c86e37b980da60 312 PIRSF PIRSF004486 2 309 1.9E-102 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SCD_RS12325 f398d704cdd0074523c86e37b980da60 312 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 4 307 1.5E-113 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SCD_RS12325 f398d704cdd0074523c86e37b980da60 312 Gene3D G3DSA:3.40.50.150 215 309 1.2E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS12325 f398d704cdd0074523c86e37b980da60 312 Gene3D G3DSA:3.40.50.150 7 109 1.2E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS12325 f398d704cdd0074523c86e37b980da60 312 PANTHER PTHR11265:SF0 5 310 2.0E-141 T 22-04-2016 SCD_RS12325 f398d704cdd0074523c86e37b980da60 312 SUPERFAMILY SSF53335 212 308 5.32E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS12325 f398d704cdd0074523c86e37b980da60 312 SUPERFAMILY SSF53335 7 112 5.32E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS12325 f398d704cdd0074523c86e37b980da60 312 PANTHER PTHR11265 5 310 2.0E-141 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SCD_RS12325 f398d704cdd0074523c86e37b980da60 312 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 308 38.0 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SCD_RS12325 f398d704cdd0074523c86e37b980da60 312 Pfam PF01795 MraW methylase family 5 307 6.7E-109 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SCD_RS08365 d3270d3d8d58727351b66faec611f989 402 Pfam PF12704 MacB-like periplasmic core domain 20 240 1.2E-41 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SCD_RS08365 d3270d3d8d58727351b66faec611f989 402 PANTHER PTHR30572 1 402 2.2E-156 T 22-04-2016 SCD_RS08365 d3270d3d8d58727351b66faec611f989 402 PANTHER PTHR30572:SF9 1 402 2.2E-156 T 22-04-2016 SCD_RS08365 d3270d3d8d58727351b66faec611f989 402 Pfam PF02687 FtsX-like permease family 283 395 1.8E-18 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SCD_RS07415 c9540d05293989105bc2ea0fc2a08808 231 SUPERFAMILY SSF46548 102 229 8.55E-39 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SCD_RS07415 c9540d05293989105bc2ea0fc2a08808 231 Pfam PF13534 4Fe-4S dicluster domain 141 214 1.5E-9 T 22-04-2016 SCD_RS07415 c9540d05293989105bc2ea0fc2a08808 231 Gene3D G3DSA:3.10.20.30 1 100 1.3E-36 T 22-04-2016 IPR012675 Beta-grasp domain SCD_RS07415 c9540d05293989105bc2ea0fc2a08808 231 SUPERFAMILY SSF54292 2 100 1.15E-26 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SCD_RS07415 c9540d05293989105bc2ea0fc2a08808 231 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 3 105 9.0E-30 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SCD_RS07415 c9540d05293989105bc2ea0fc2a08808 231 Gene3D G3DSA:1.10.1060.10 101 229 3.5E-47 T 22-04-2016 SCD_RS07415 c9540d05293989105bc2ea0fc2a08808 231 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 142 153 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS07415 c9540d05293989105bc2ea0fc2a08808 231 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 5 223 3.5E-82 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SCD_RS07415 c9540d05293989105bc2ea0fc2a08808 231 PANTHER PTHR11921 3 229 8.3E-128 T 22-04-2016 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 SMART SM00663 235 514 2.1E-181 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 SUPERFAMILY SSF64484 1135 1364 0.0 T 22-04-2016 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 SUPERFAMILY SSF64484 16 944 0.0 T 22-04-2016 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 1.2E-85 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1377 10.466 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1317 2.5E-75 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 4.2E-27 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 PANTHER PTHR19376:SF32 1176 1263 0.0 T 22-04-2016 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 PANTHER PTHR19376:SF32 1304 1375 0.0 T 22-04-2016 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 PANTHER PTHR19376:SF32 970 1159 0.0 T 22-04-2016 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 PANTHER PTHR19376:SF32 4 551 0.0 T 22-04-2016 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 PANTHER PTHR19376:SF32 570 943 0.0 T 22-04-2016 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 588 32.187 T 22-04-2016 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.5E-19 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 Gene3D G3DSA:2.40.40.20 417 489 7.4E-37 T 22-04-2016 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 Gene3D G3DSA:2.40.40.20 349 376 7.4E-37 T 22-04-2016 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 PANTHER PTHR19376 1176 1263 0.0 T 22-04-2016 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 PANTHER PTHR19376 1304 1375 0.0 T 22-04-2016 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 PANTHER PTHR19376 970 1159 0.0 T 22-04-2016 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 PANTHER PTHR19376 4 551 0.0 T 22-04-2016 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 PANTHER PTHR19376 570 943 0.0 T 22-04-2016 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 Gene3D G3DSA:2.40.50.100 981 1018 2.0E-5 T 22-04-2016 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 Gene3D G3DSA:2.40.50.100 1158 1210 6.8E-5 T 22-04-2016 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 386 6.1E-8 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03075 efe96bd8de55c851a4a453eedffca2eb 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 391 485 6.1E-28 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS12960 13d1bde531026cc718a19c5965c02ca5 208 Gene3D G3DSA:2.170.120.20 98 194 7.2E-29 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain SCD_RS12960 13d1bde531026cc718a19c5965c02ca5 208 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 176 2.2E-44 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 SCD_RS12960 13d1bde531026cc718a19c5965c02ca5 208 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 3 186 31.08 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 SCD_RS12960 13d1bde531026cc718a19c5965c02ca5 208 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 100 189 4.4E-28 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain SCD_RS12960 13d1bde531026cc718a19c5965c02ca5 208 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 3 95 23.127 T 22-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 SCD_RS12960 13d1bde531026cc718a19c5965c02ca5 208 SUPERFAMILY SSF50715 2 194 2.09E-55 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 SCD_RS12960 13d1bde531026cc718a19c5965c02ca5 208 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 14 95 4.0E-30 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 SCD_RS12960 13d1bde531026cc718a19c5965c02ca5 208 PANTHER PTHR33284 1 208 3.3E-63 T 22-04-2016 SCD_RS12960 13d1bde531026cc718a19c5965c02ca5 208 Gene3D G3DSA:2.40.240.10 3 95 6.5E-33 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 SCD_RS12960 13d1bde531026cc718a19c5965c02ca5 208 Pfam PF01386 Ribosomal L25p family 5 92 8.0E-25 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 Pfam PF00873 AcrB/AcrD/AcrF family 6 1022 1.2E-273 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 SUPERFAMILY SSF82714 718 802 6.02E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 SUPERFAMILY SSF82693 560 654 5.23E-8 T 22-04-2016 SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1026 0.0 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 3.3E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.3E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 3.3E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 3.3E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.3E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 PRINTS PR00702 Acriflavin resistance protein family signature 546 563 3.3E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 Gene3D G3DSA:3.30.70.1430 562 652 3.6E-4 T 22-04-2016 SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 SUPERFAMILY SSF82866 290 499 1.44E-34 T 22-04-2016 SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 PANTHER PTHR32063 2 1033 0.0 T 22-04-2016 SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 Gene3D G3DSA:3.30.2090.10 182 264 9.2E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 SUPERFAMILY SSF82693 46 126 7.85E-20 T 22-04-2016 SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 SUPERFAMILY SSF82866 800 1023 5.75E-55 T 22-04-2016 SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 Gene3D G3DSA:3.30.2090.10 715 805 1.9E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 SUPERFAMILY SSF82714 183 264 1.09E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 Gene3D G3DSA:3.30.70.1430 45 140 2.2E-23 T 22-04-2016 SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 SUPERFAMILY SSF82693 145 181 6.02E-18 T 22-04-2016 SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 SUPERFAMILY SSF82693 267 324 6.02E-18 T 22-04-2016 SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 PANTHER PTHR32063:SF24 2 1033 0.0 T 22-04-2016 SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 Gene3D G3DSA:1.10.3850.10 279 501 7.3E-52 T 22-04-2016 SCD_RS11395 c0975e377ea0b4b4bc197782c7e906f2 1033 Gene3D G3DSA:1.10.3850.10 808 1024 1.3E-54 T 22-04-2016 SCD_RS00265 907a6e50c4feeb2744d0be1dad6c0648 300 SUPERFAMILY SSF52540 3 294 7.97E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00265 907a6e50c4feeb2744d0be1dad6c0648 300 ProSitePatterns PS00567 Phosphoribulokinase signature. 173 186 - T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 SCD_RS00265 907a6e50c4feeb2744d0be1dad6c0648 300 Gene3D G3DSA:3.40.50.300 1 296 3.7E-131 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00265 907a6e50c4feeb2744d0be1dad6c0648 300 PANTHER PTHR10285 1 293 3.6E-106 T 22-04-2016 SCD_RS00265 907a6e50c4feeb2744d0be1dad6c0648 300 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 223 7.9E-71 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 SCD_RS00265 907a6e50c4feeb2744d0be1dad6c0648 300 PANTHER PTHR10285:SF72 1 293 3.6E-106 T 22-04-2016 SCD_RS00265 907a6e50c4feeb2744d0be1dad6c0648 300 PRINTS PR00478 Phosphoribulokinase family signature 135 153 3.8E-31 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 SCD_RS00265 907a6e50c4feeb2744d0be1dad6c0648 300 PRINTS PR00478 Phosphoribulokinase family signature 12 29 3.8E-31 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 SCD_RS00265 907a6e50c4feeb2744d0be1dad6c0648 300 PRINTS PR00478 Phosphoribulokinase family signature 173 190 3.8E-31 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 SCD_RS00265 907a6e50c4feeb2744d0be1dad6c0648 300 PRINTS PR00478 Phosphoribulokinase family signature 191 214 3.8E-31 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 SCD_RS02075 ff8e291c2fecd4f90af8b25ba9187cce 208 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 48 156 8.4E-18 T 22-04-2016 IPR010319 Transglutaminase-like cysteine peptidase, predicted SCD_RS02075 ff8e291c2fecd4f90af8b25ba9187cce 208 PANTHER PTHR39327:SF1 16 204 4.1E-77 T 22-04-2016 SCD_RS02075 ff8e291c2fecd4f90af8b25ba9187cce 208 PANTHER PTHR39327 16 204 4.1E-77 T 22-04-2016 SCD_RS02075 ff8e291c2fecd4f90af8b25ba9187cce 208 SUPERFAMILY SSF54001 32 134 6.38E-7 T 22-04-2016 SCD_RS09695 2e75a66bea2907e18eb5aaccb7c3d085 306 PANTHER PTHR11825 1 305 7.7E-114 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SCD_RS09695 2e75a66bea2907e18eb5aaccb7c3d085 306 Pfam PF01063 Amino-transferase class IV 36 266 6.1E-57 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SCD_RS09695 2e75a66bea2907e18eb5aaccb7c3d085 306 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 306 1.8E-135 T 22-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 SCD_RS09695 2e75a66bea2907e18eb5aaccb7c3d085 306 Gene3D G3DSA:3.20.10.10 134 295 1.2E-59 T 22-04-2016 SCD_RS09695 2e75a66bea2907e18eb5aaccb7c3d085 306 SUPERFAMILY SSF56752 1 303 6.15E-105 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SCD_RS09695 2e75a66bea2907e18eb5aaccb7c3d085 306 Gene3D G3DSA:3.30.470.10 8 130 3.7E-38 T 22-04-2016 SCD_RS09695 2e75a66bea2907e18eb5aaccb7c3d085 306 PANTHER PTHR11825:SF7 1 305 7.7E-114 T 22-04-2016 SCD_RS09695 2e75a66bea2907e18eb5aaccb7c3d085 306 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 222 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 SCD_RS13800 2101162fc46cf6ea6597c8a5c915e50e 740 SUPERFAMILY SSF74863 157 275 1.44E-33 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SCD_RS13800 2101162fc46cf6ea6597c8a5c915e50e 740 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 739 35.013 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 SCD_RS13800 2101162fc46cf6ea6597c8a5c915e50e 740 Gene3D G3DSA:3.40.30.10 628 737 2.1E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS13800 2101162fc46cf6ea6597c8a5c915e50e 740 Gene3D G3DSA:2.60.40.1250 16 137 1.0E-38 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SCD_RS13800 2101162fc46cf6ea6597c8a5c915e50e 740 Gene3D G3DSA:2.60.40.1250 155 277 5.7E-39 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SCD_RS13800 2101162fc46cf6ea6597c8a5c915e50e 740 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 332 537 2.9E-18 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 SCD_RS13800 2101162fc46cf6ea6597c8a5c915e50e 740 PANTHER PTHR32234 156 275 3.2E-162 T 22-04-2016 SCD_RS13800 2101162fc46cf6ea6597c8a5c915e50e 740 PANTHER PTHR32234 297 740 3.2E-162 T 22-04-2016 SCD_RS13800 2101162fc46cf6ea6597c8a5c915e50e 740 PANTHER PTHR32234:SF0 156 275 3.2E-162 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 SCD_RS13800 2101162fc46cf6ea6597c8a5c915e50e 740 PANTHER PTHR32234:SF0 297 740 3.2E-162 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 SCD_RS13800 2101162fc46cf6ea6597c8a5c915e50e 740 Pfam PF13098 Thioredoxin-like domain 640 732 8.1E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS13800 2101162fc46cf6ea6597c8a5c915e50e 740 SUPERFAMILY SSF52833 628 732 4.61E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS13800 2101162fc46cf6ea6597c8a5c915e50e 740 ProSitePatterns PS00194 Thioredoxin family active site. 647 665 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SCD_RS13800 2101162fc46cf6ea6597c8a5c915e50e 740 SUPERFAMILY SSF74863 19 135 2.09E-34 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SCD_RS13800 2101162fc46cf6ea6597c8a5c915e50e 740 Pfam PF11412 Disulphide bond corrector protein DsbC 21 135 1.4E-32 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SCD_RS13800 2101162fc46cf6ea6597c8a5c915e50e 740 Pfam PF11412 Disulphide bond corrector protein DsbC 157 274 1.2E-31 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SCD_RS02160 015b2a21156efb3d3135b2c285793444 801 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 128 140 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 SCD_RS02160 015b2a21156efb3d3135b2c285793444 801 Gene3D G3DSA:1.10.510.10 107 261 1.8E-45 T 22-04-2016 SCD_RS02160 015b2a21156efb3d3135b2c285793444 801 SUPERFAMILY SSF109604 289 565 7.22E-49 T 22-04-2016 SCD_RS02160 015b2a21156efb3d3135b2c285793444 801 SUPERFAMILY SSF55781 637 799 3.27E-11 T 22-04-2016 IPR029016 GAF domain-like SCD_RS02160 015b2a21156efb3d3135b2c285793444 801 SUPERFAMILY SSF56112 5 281 1.89E-72 T 22-04-2016 IPR011009 Protein kinase-like domain SCD_RS02160 015b2a21156efb3d3135b2c285793444 801 Gene3D G3DSA:3.30.200.20 5 106 2.3E-24 T 22-04-2016 SCD_RS02160 015b2a21156efb3d3135b2c285793444 801 Gene3D G3DSA:1.10.3150.10 288 564 3.7E-56 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS02160 015b2a21156efb3d3135b2c285793444 801 PANTHER PTHR24362 5 306 1.2E-69 T 22-04-2016 SCD_RS02160 015b2a21156efb3d3135b2c285793444 801 Gene3D G3DSA:3.30.450.40 637 798 1.1E-10 T 22-04-2016 IPR029016 GAF domain-like SCD_RS02160 015b2a21156efb3d3135b2c285793444 801 PANTHER PTHR24362:SF160 5 306 1.2E-69 T 22-04-2016 SCD_RS02160 015b2a21156efb3d3135b2c285793444 801 Pfam PF08668 HDOD domain 301 493 6.6E-37 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS02160 015b2a21156efb3d3135b2c285793444 801 Pfam PF00069 Protein kinase domain 8 260 6.6E-52 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SCD_RS02160 015b2a21156efb3d3135b2c285793444 801 SMART SM00220 8 268 6.4E-62 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SCD_RS03215 3c29e143f70f07c77fa0ef5e54af45ef 120 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 28.145 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03215 3c29e143f70f07c77fa0ef5e54af45ef 120 PIRSF PIRSF002134 1 120 3.2E-43 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03215 3c29e143f70f07c77fa0ef5e54af45ef 120 PANTHER PTHR10871 1 120 2.4E-64 T 22-04-2016 SCD_RS03215 3c29e143f70f07c77fa0ef5e54af45ef 120 Gene3D G3DSA:1.10.8.50 1 71 2.8E-29 T 22-04-2016 SCD_RS03215 3c29e143f70f07c77fa0ef5e54af45ef 120 SUPERFAMILY SSF46946 2 114 1.23E-46 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SCD_RS03215 3c29e143f70f07c77fa0ef5e54af45ef 120 Pfam PF00416 Ribosomal protein S13/S18 3 108 6.2E-32 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03215 3c29e143f70f07c77fa0ef5e54af45ef 120 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.7E-53 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03215 3c29e143f70f07c77fa0ef5e54af45ef 120 Gene3D G3DSA:4.10.910.10 72 119 1.8E-27 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal SCD_RS03215 3c29e143f70f07c77fa0ef5e54af45ef 120 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 SCD_RS06620 49f23fdd738fa958a92de290c8b8b955 343 PRINTS PR01713 Nucleotide sugar epimerase signature 303 320 5.5E-7 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SCD_RS06620 49f23fdd738fa958a92de290c8b8b955 343 PRINTS PR01713 Nucleotide sugar epimerase signature 44 60 5.5E-7 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SCD_RS06620 49f23fdd738fa958a92de290c8b8b955 343 PRINTS PR01713 Nucleotide sugar epimerase signature 233 248 5.5E-7 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SCD_RS06620 49f23fdd738fa958a92de290c8b8b955 343 PANTHER PTHR10366 17 337 6.5E-133 T 22-04-2016 SCD_RS06620 49f23fdd738fa958a92de290c8b8b955 343 PANTHER PTHR10366:SF472 17 337 6.5E-133 T 22-04-2016 SCD_RS06620 49f23fdd738fa958a92de290c8b8b955 343 Pfam PF01370 NAD dependent epimerase/dehydratase family 18 264 2.7E-54 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SCD_RS06620 49f23fdd738fa958a92de290c8b8b955 343 Gene3D G3DSA:3.40.50.720 16 196 1.7E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS06620 49f23fdd738fa958a92de290c8b8b955 343 Gene3D G3DSA:3.90.25.10 197 326 8.7E-33 T 22-04-2016 SCD_RS06620 49f23fdd738fa958a92de290c8b8b955 343 SUPERFAMILY SSF51735 1 339 1.01E-84 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS06655 2f6d84fff0fdfac09f7e345df200a5bb 159 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 113 5.0E-6 T 22-04-2016 IPR001451 Hexapeptide repeat SCD_RS06655 2f6d84fff0fdfac09f7e345df200a5bb 159 PANTHER PTHR23416 5 132 7.7E-33 T 22-04-2016 SCD_RS06655 2f6d84fff0fdfac09f7e345df200a5bb 159 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 87 115 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SCD_RS06655 2f6d84fff0fdfac09f7e345df200a5bb 159 SUPERFAMILY SSF51161 24 133 6.65E-35 T 22-04-2016 IPR011004 Trimeric LpxA-like SCD_RS06655 2f6d84fff0fdfac09f7e345df200a5bb 159 Gene3D G3DSA:2.160.10.10 3 133 1.4E-40 T 22-04-2016 SCD_RS10110 6c916f56fa5dd81e3a9efa74f0d30fd0 178 SUPERFAMILY SSF89028 5 176 2.35E-58 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 SCD_RS10110 6c916f56fa5dd81e3a9efa74f0d30fd0 178 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 7 176 9.3E-58 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 SCD_RS10110 6c916f56fa5dd81e3a9efa74f0d30fd0 178 PANTHER PTHR12213 1 177 1.6E-68 T 22-04-2016 SCD_RS10110 6c916f56fa5dd81e3a9efa74f0d30fd0 178 Gene3D G3DSA:1.20.1200.10 15 177 3.3E-60 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 SCD_RS10110 6c916f56fa5dd81e3a9efa74f0d30fd0 178 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 12 177 1.0E-46 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 SCD_RS10110 6c916f56fa5dd81e3a9efa74f0d30fd0 178 Pfam PF01923 Cobalamin adenosyltransferase 6 163 2.3E-55 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 SCD_RS01060 a01499694110f228d747443ebc65c033 614 SUPERFAMILY SSF50249 212 551 2.46E-73 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS01060 a01499694110f228d747443ebc65c033 614 SMART SM00955 239 507 3.1E-52 T 22-04-2016 SCD_RS01060 a01499694110f228d747443ebc65c033 614 PANTHER PTHR23355 245 562 1.9E-36 T 22-04-2016 SCD_RS01060 a01499694110f228d747443ebc65c033 614 Pfam PF00773 RNB domain 466 505 9.5E-8 T 22-04-2016 SCD_RS01060 a01499694110f228d747443ebc65c033 614 Pfam PF00773 RNB domain 242 461 3.2E-35 T 22-04-2016 SCD_RS15605 f9f93ca3c9f4c1ba15504fd3c33c3396 1670 SUPERFAMILY SSF48695 1068 1516 5.14E-24 T 22-04-2016 IPR011031 Multihaem cytochrome SCD_RS15605 f9f93ca3c9f4c1ba15504fd3c33c3396 1670 Gene3D G3DSA:3.90.10.10 975 1044 5.3E-6 T 22-04-2016 SCD_RS15605 f9f93ca3c9f4c1ba15504fd3c33c3396 1670 SUPERFAMILY SSF48695 542 786 8.38E-20 T 22-04-2016 IPR011031 Multihaem cytochrome SCD_RS15605 f9f93ca3c9f4c1ba15504fd3c33c3396 1670 Gene3D G3DSA:1.10.780.10 28 158 2.3E-10 T 22-04-2016 SCD_RS15605 f9f93ca3c9f4c1ba15504fd3c33c3396 1670 SUPERFAMILY SSF48695 383 603 1.42E-19 T 22-04-2016 IPR011031 Multihaem cytochrome SCD_RS15605 f9f93ca3c9f4c1ba15504fd3c33c3396 1670 Gene3D G3DSA:3.90.10.10 1353 1511 3.5E-13 T 22-04-2016 SCD_RS15605 f9f93ca3c9f4c1ba15504fd3c33c3396 1670 SUPERFAMILY SSF48695 25 406 5.54E-23 T 22-04-2016 IPR011031 Multihaem cytochrome SCD_RS15605 f9f93ca3c9f4c1ba15504fd3c33c3396 1670 Gene3D G3DSA:3.90.10.10 1302 1352 9.9E-4 T 22-04-2016 SCD_RS15605 f9f93ca3c9f4c1ba15504fd3c33c3396 1670 SUPERFAMILY SSF48695 718 980 1.36E-18 T 22-04-2016 IPR011031 Multihaem cytochrome SCD_RS15605 f9f93ca3c9f4c1ba15504fd3c33c3396 1670 Gene3D G3DSA:1.10.3820.10 1512 1657 1.2E-8 T 22-04-2016 SCD_RS15605 f9f93ca3c9f4c1ba15504fd3c33c3396 1670 SUPERFAMILY SSF48695 926 1049 2.55E-6 T 22-04-2016 IPR011031 Multihaem cytochrome SCD_RS15605 f9f93ca3c9f4c1ba15504fd3c33c3396 1670 Pfam PF13435 Cytochrome c554 and c-prime 933 969 0.032 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SCD_RS15605 f9f93ca3c9f4c1ba15504fd3c33c3396 1670 Gene3D G3DSA:1.10.710.10 536 678 1.1E-13 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SCD_RS15605 f9f93ca3c9f4c1ba15504fd3c33c3396 1670 Gene3D G3DSA:1.10.710.10 1045 1301 2.1E-14 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SCD_RS15605 f9f93ca3c9f4c1ba15504fd3c33c3396 1670 Gene3D G3DSA:1.10.710.10 696 942 4.1E-16 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SCD_RS15605 f9f93ca3c9f4c1ba15504fd3c33c3396 1670 Gene3D G3DSA:1.10.710.10 393 502 1.1E-13 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SCD_RS15605 f9f93ca3c9f4c1ba15504fd3c33c3396 1670 Gene3D G3DSA:1.10.710.10 159 374 3.6E-16 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SCD_RS15605 f9f93ca3c9f4c1ba15504fd3c33c3396 1670 SUPERFAMILY SSF48695 1460 1660 1.17E-10 T 22-04-2016 IPR011031 Multihaem cytochrome SCD_RS09245 f760de7d02b1997e781d1d945abac2f2 188 PANTHER PTHR11241 1 188 4.6E-77 T 22-04-2016 SCD_RS09245 f760de7d02b1997e781d1d945abac2f2 188 PANTHER PTHR11241:SF1 1 188 4.6E-77 T 22-04-2016 SCD_RS09245 f760de7d02b1997e781d1d945abac2f2 188 Gene3D G3DSA:2.70.40.10 3 188 3.9E-68 T 22-04-2016 IPR029054 dUTPase-like SCD_RS09245 f760de7d02b1997e781d1d945abac2f2 188 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 188 2.6E-49 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 SCD_RS09245 f760de7d02b1997e781d1d945abac2f2 188 Pfam PF00692 dUTPase 79 184 3.8E-7 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 SCD_RS09245 f760de7d02b1997e781d1d945abac2f2 188 SUPERFAMILY SSF51283 3 188 2.49E-52 T 22-04-2016 IPR029054 dUTPase-like SCD_RS09245 f760de7d02b1997e781d1d945abac2f2 188 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 188 28.436 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 SCD_RS08775 be4158b97bcab949da4bf3dba545dfbc 421 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 8 410 6.4E-204 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 SCD_RS08775 be4158b97bcab949da4bf3dba545dfbc 421 SMART SM01086 315 410 5.5E-33 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SCD_RS08775 be4158b97bcab949da4bf3dba545dfbc 421 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 315 392 1.0E-14 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SCD_RS08775 be4158b97bcab949da4bf3dba545dfbc 421 SMART SM00382 110 331 1.0E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS08775 be4158b97bcab949da4bf3dba545dfbc 421 Gene3D G3DSA:1.10.8.60 315 416 2.1E-37 T 22-04-2016 SCD_RS08775 be4158b97bcab949da4bf3dba545dfbc 421 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 413 53.394 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 SCD_RS08775 be4158b97bcab949da4bf3dba545dfbc 421 SMART SM00994 10 49 4.0E-23 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 SCD_RS08775 be4158b97bcab949da4bf3dba545dfbc 421 Pfam PF07724 AAA domain (Cdc48 subfamily) 111 309 3.7E-50 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SCD_RS08775 be4158b97bcab949da4bf3dba545dfbc 421 SUPERFAMILY SSF52540 61 395 4.5E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08775 be4158b97bcab949da4bf3dba545dfbc 421 SUPERFAMILY SSF57716 11 46 2.14E-11 T 22-04-2016 SCD_RS08775 be4158b97bcab949da4bf3dba545dfbc 421 Pfam PF06689 ClpX C4-type zinc finger 11 48 6.7E-20 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 SCD_RS08775 be4158b97bcab949da4bf3dba545dfbc 421 Gene3D G3DSA:3.40.50.300 292 309 3.0E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08775 be4158b97bcab949da4bf3dba545dfbc 421 Gene3D G3DSA:3.40.50.300 64 252 3.0E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08775 be4158b97bcab949da4bf3dba545dfbc 421 PANTHER PTHR11262 7 412 7.4E-251 T 22-04-2016 SCD_RS07895 aae798b450abc8f4cb640d1e81bffceb 153 SUPERFAMILY SSF55729 10 153 2.36E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS07895 aae798b450abc8f4cb640d1e81bffceb 153 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 18 149 3.1E-37 T 22-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 SCD_RS07895 aae798b450abc8f4cb640d1e81bffceb 153 Gene3D G3DSA:3.40.630.30 9 153 2.1E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS07895 aae798b450abc8f4cb640d1e81bffceb 153 PANTHER PTHR23091:SF247 1 153 2.0E-29 T 22-04-2016 SCD_RS07895 aae798b450abc8f4cb640d1e81bffceb 153 PANTHER PTHR23091 1 153 2.0E-29 T 22-04-2016 SCD_RS07895 aae798b450abc8f4cb640d1e81bffceb 153 Pfam PF00583 Acetyltransferase (GNAT) family 54 127 1.4E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SCD_RS12925 d15d3ca57fb3e58f88b0d0f3602714b3 164 Pfam PF01641 SelR domain 43 160 3.9E-47 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SCD_RS12925 d15d3ca57fb3e58f88b0d0f3602714b3 164 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 39 162 3.9E-47 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SCD_RS12925 d15d3ca57fb3e58f88b0d0f3602714b3 164 SUPERFAMILY SSF51316 38 162 2.04E-54 T 22-04-2016 IPR011057 Mss4-like SCD_RS12925 d15d3ca57fb3e58f88b0d0f3602714b3 164 Gene3D G3DSA:2.170.150.20 35 162 9.7E-53 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SCD_RS12925 d15d3ca57fb3e58f88b0d0f3602714b3 164 PANTHER PTHR10173 39 160 5.5E-44 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SCD_RS12925 d15d3ca57fb3e58f88b0d0f3602714b3 164 PANTHER PTHR10173:SF18 39 160 5.5E-44 T 22-04-2016 SCD_RS13790 97e2e550dd10680e5271f3e2174d9d90 129 PIRSF PIRSF001399 1 129 1.5E-48 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SCD_RS13790 97e2e550dd10680e5271f3e2174d9d90 129 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 129 60.633 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SCD_RS13790 97e2e550dd10680e5271f3e2174d9d90 129 PANTHER PTHR21272 2 129 3.0E-68 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SCD_RS13790 97e2e550dd10680e5271f3e2174d9d90 129 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 2 127 2.1E-51 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SCD_RS13790 97e2e550dd10680e5271f3e2174d9d90 129 Pfam PF01220 Dehydroquinase class II 2 124 3.6E-49 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SCD_RS13790 97e2e550dd10680e5271f3e2174d9d90 129 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 2 125 5.0E-46 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SCD_RS13790 97e2e550dd10680e5271f3e2174d9d90 129 SUPERFAMILY SSF52304 1 127 1.57E-50 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SCD_RS13790 97e2e550dd10680e5271f3e2174d9d90 129 Gene3D G3DSA:3.40.50.9100 2 127 2.6E-55 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SCD_RS01080 aa60ae0ee0c9ed7b198718ab74122cdd 304 Pfam PF01263 Aldose 1-epimerase 32 292 7.0E-48 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 SCD_RS01080 aa60ae0ee0c9ed7b198718ab74122cdd 304 PIRSF PIRSF016020 6 302 1.2E-67 T 22-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 SCD_RS01080 aa60ae0ee0c9ed7b198718ab74122cdd 304 SUPERFAMILY SSF74650 26 294 2.07E-62 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SCD_RS01080 aa60ae0ee0c9ed7b198718ab74122cdd 304 PANTHER PTHR11122 8 300 9.4E-92 T 22-04-2016 SCD_RS01080 aa60ae0ee0c9ed7b198718ab74122cdd 304 Gene3D G3DSA:2.70.98.10 14 300 2.5E-88 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SCD_RS07695 3cf3bd2b899d89290d27d83a67163ac0 129 Pfam PF03748 Flagellar basal body-associated protein FliL 34 129 2.7E-24 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 SCD_RS07695 3cf3bd2b899d89290d27d83a67163ac0 129 PANTHER PTHR35091 4 129 1.5E-19 T 22-04-2016 SCD_RS08645 fcbda61a3ac895e27a5f33784ace98a7 309 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 14 295 1.2E-37 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD SCD_RS08645 fcbda61a3ac895e27a5f33784ace98a7 309 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 17 292 1.3E-18 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD SCD_RS08645 fcbda61a3ac895e27a5f33784ace98a7 309 PANTHER PTHR40277 8 299 3.2E-25 T 22-04-2016 SCD_RS01330 8b36b4fc0ccdacc66829913bc4c2ba90 112 PIRSF PIRSF039144 1 112 1.2E-54 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SCD_RS01330 8b36b4fc0ccdacc66829913bc4c2ba90 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 SCD_RS01330 8b36b4fc0ccdacc66829913bc4c2ba90 112 SMART SM00938 4 105 9.1E-65 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SCD_RS01330 8b36b4fc0ccdacc66829913bc4c2ba90 112 SUPERFAMILY SSF54913 1 112 7.63E-45 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SCD_RS01330 8b36b4fc0ccdacc66829913bc4c2ba90 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 7.6E-42 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SCD_RS01330 8b36b4fc0ccdacc66829913bc4c2ba90 112 Gene3D G3DSA:3.30.70.120 1 112 3.2E-50 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SCD_RS01330 8b36b4fc0ccdacc66829913bc4c2ba90 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 SCD_RS01330 8b36b4fc0ccdacc66829913bc4c2ba90 112 PRINTS PR00340 P-II protein signature 52 75 7.3E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SCD_RS01330 8b36b4fc0ccdacc66829913bc4c2ba90 112 PRINTS PR00340 P-II protein signature 83 103 7.3E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SCD_RS01330 8b36b4fc0ccdacc66829913bc4c2ba90 112 PRINTS PR00340 P-II protein signature 23 41 7.3E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SCD_RS01330 8b36b4fc0ccdacc66829913bc4c2ba90 112 PRINTS PR00340 P-II protein signature 2 17 7.3E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SCD_RS01330 8b36b4fc0ccdacc66829913bc4c2ba90 112 PANTHER PTHR30115 1 112 2.5E-71 T 22-04-2016 SCD_RS01330 8b36b4fc0ccdacc66829913bc4c2ba90 112 PANTHER PTHR30115:SF12 1 112 2.5E-71 T 22-04-2016 SCD_RS02325 eaa347e0a3ca1f03795090efe4394fe7 416 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 316 411 1.1E-26 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SCD_RS02325 eaa347e0a3ca1f03795090efe4394fe7 416 SUPERFAMILY SSF69742 1 154 9.29E-48 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SCD_RS02325 eaa347e0a3ca1f03795090efe4394fe7 416 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 404 3.1E-134 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SCD_RS02325 eaa347e0a3ca1f03795090efe4394fe7 416 Gene3D G3DSA:3.40.50.720 179 355 3.5E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS02325 eaa347e0a3ca1f03795090efe4394fe7 416 PANTHER PTHR21089:SF3 268 355 8.0E-116 T 22-04-2016 SCD_RS02325 eaa347e0a3ca1f03795090efe4394fe7 416 PANTHER PTHR21089:SF3 39 252 8.0E-116 T 22-04-2016 SCD_RS02325 eaa347e0a3ca1f03795090efe4394fe7 416 SUPERFAMILY SSF51735 158 311 1.45E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS02325 eaa347e0a3ca1f03795090efe4394fe7 416 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 95 118 - T 22-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SCD_RS02325 eaa347e0a3ca1f03795090efe4394fe7 416 SUPERFAMILY SSF69075 313 413 6.93E-29 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SCD_RS02325 eaa347e0a3ca1f03795090efe4394fe7 416 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 152 6.1E-51 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SCD_RS02325 eaa347e0a3ca1f03795090efe4394fe7 416 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 168 302 3.0E-46 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase SCD_RS02325 eaa347e0a3ca1f03795090efe4394fe7 416 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 414 30.344 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SCD_RS02325 eaa347e0a3ca1f03795090efe4394fe7 416 PANTHER PTHR21089 268 355 8.0E-116 T 22-04-2016 SCD_RS02325 eaa347e0a3ca1f03795090efe4394fe7 416 PANTHER PTHR21089 39 252 8.0E-116 T 22-04-2016 SCD_RS02325 eaa347e0a3ca1f03795090efe4394fe7 416 PIRSF PIRSF000445 1 416 1.3E-152 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SCD_RS02365 491ade312e7680283376478f1389beff 304 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 37 287 1.4E-20 T 22-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 SCD_RS02365 491ade312e7680283376478f1389beff 304 SUPERFAMILY SSF51197 43 291 1.05E-45 T 22-04-2016 SCD_RS02365 491ade312e7680283376478f1389beff 304 Gene3D G3DSA:3.60.130.10 103 293 2.0E-27 T 22-04-2016 SCD_RS05875 98437840f2da1a0d84cfb5345e47e302 428 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 218 401 1.1E-37 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS05875 98437840f2da1a0d84cfb5345e47e302 428 PANTHER PTHR11778:SF0 1 427 1.1E-206 T 22-04-2016 SCD_RS05875 98437840f2da1a0d84cfb5345e47e302 428 PIRSF PIRSF001529 1 427 8.2E-181 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SCD_RS05875 98437840f2da1a0d84cfb5345e47e302 428 PANTHER PTHR11778 1 427 1.1E-206 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SCD_RS05875 98437840f2da1a0d84cfb5345e47e302 428 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 6.7E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SCD_RS05875 98437840f2da1a0d84cfb5345e47e302 428 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 6.7E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SCD_RS05875 98437840f2da1a0d84cfb5345e47e302 428 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 6.7E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SCD_RS05875 98437840f2da1a0d84cfb5345e47e302 428 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 6.7E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SCD_RS05875 98437840f2da1a0d84cfb5345e47e302 428 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 6.7E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SCD_RS05875 98437840f2da1a0d84cfb5345e47e302 428 SUPERFAMILY SSF55681 116 423 2.99E-100 T 22-04-2016 SCD_RS05875 98437840f2da1a0d84cfb5345e47e302 428 Gene3D G3DSA:1.10.287.40 1 104 4.6E-28 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 SCD_RS05875 98437840f2da1a0d84cfb5345e47e302 428 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 5.8E-31 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 SCD_RS05875 98437840f2da1a0d84cfb5345e47e302 428 SUPERFAMILY SSF46589 1 112 2.2E-29 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SCD_RS05875 98437840f2da1a0d84cfb5345e47e302 428 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 423 40.846 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SCD_RS05875 98437840f2da1a0d84cfb5345e47e302 428 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 418 2.4E-167 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SCD_RS05875 98437840f2da1a0d84cfb5345e47e302 428 Gene3D G3DSA:3.30.930.10 105 422 9.1E-142 T 22-04-2016 SCD_RS04170 628c647abc87dc4394d98531d942a6cc 362 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 149 357 4.9E-57 T 22-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 SCD_RS04170 628c647abc87dc4394d98531d942a6cc 362 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 103 8.2E-22 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SCD_RS04170 628c647abc87dc4394d98531d942a6cc 362 PANTHER PTHR11079 1 223 1.4E-63 T 22-04-2016 SCD_RS04170 628c647abc87dc4394d98531d942a6cc 362 Pfam PF01872 RibD C-terminal domain 150 349 8.9E-50 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 SCD_RS04170 628c647abc87dc4394d98531d942a6cc 362 PIRSF PIRSF006769 1 362 1.2E-126 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 SCD_RS04170 628c647abc87dc4394d98531d942a6cc 362 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 10 355 2.2E-116 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 SCD_RS04170 628c647abc87dc4394d98531d942a6cc 362 SUPERFAMILY SSF53927 6 147 3.85E-49 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SCD_RS04170 628c647abc87dc4394d98531d942a6cc 362 Gene3D G3DSA:3.40.140.10 5 131 2.1E-35 T 22-04-2016 SCD_RS04170 628c647abc87dc4394d98531d942a6cc 362 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 91 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SCD_RS04170 628c647abc87dc4394d98531d942a6cc 362 Gene3D G3DSA:3.40.430.10 132 357 1.1E-70 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain SCD_RS04170 628c647abc87dc4394d98531d942a6cc 362 SUPERFAMILY SSF53597 148 356 2.27E-59 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain SCD_RS04170 628c647abc87dc4394d98531d942a6cc 362 PANTHER PTHR11079:SF10 1 223 1.4E-63 T 22-04-2016 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 PANTHER PTHR22931 5 631 0.0 T 22-04-2016 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 PANTHER PTHR22931 693 929 0.0 T 22-04-2016 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 SUPERFAMILY SSF56059 3 379 2.94E-129 T 22-04-2016 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 4 921 0.0 T 22-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 SUPERFAMILY SSF51621 511 646 5.89E-113 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 SUPERFAMILY SSF51621 697 920 5.89E-113 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 19 75 5.1E-12 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 58 293 8.2E-27 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 305 358 8.1E-9 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 Gene3D G3DSA:3.30.1490.20 200 245 4.0E-52 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 Gene3D G3DSA:3.30.1490.20 5 111 4.0E-52 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 Gene3D G3DSA:3.30.470.20 246 342 3.9E-36 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 Gene3D G3DSA:3.20.20.60 533 646 1.1E-129 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 Gene3D G3DSA:3.20.20.60 697 921 1.1E-129 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 PIRSF PIRSF000853 3 928 0.0 T 22-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 Gene3D G3DSA:1.20.80.30 112 198 3.1E-29 T 22-04-2016 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 518 920 6.0E-89 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 Gene3D G3DSA:3.50.30.10 402 506 6.6E-40 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 PANTHER PTHR22931:SF9 5 631 0.0 T 22-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 PANTHER PTHR22931:SF9 693 929 0.0 T 22-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 450 461 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 SUPERFAMILY SSF52009 387 512 2.09E-37 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 Gene3D G3DSA:1.10.189.10 345 401 2.8E-25 T 22-04-2016 SCD_RS13475 afb57b511857472e0dc744dfe5e69d4c 930 Pfam PF00391 PEP-utilising enzyme, mobile domain 422 503 5.7E-28 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SCD_RS10855 a4c676cdde2e52e3ba2a5b7b4309c8c7 623 SMART SM00861 316 480 8.5E-72 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SCD_RS10855 a4c676cdde2e52e3ba2a5b7b4309c8c7 623 SUPERFAMILY SSF52518 314 501 2.46E-62 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS10855 a4c676cdde2e52e3ba2a5b7b4309c8c7 623 ProSitePatterns PS00801 Transketolase signature 1. 33 52 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SCD_RS10855 a4c676cdde2e52e3ba2a5b7b4309c8c7 623 PANTHER PTHR11624 21 215 0.0 T 22-04-2016 IPR033247 Transketolase family SCD_RS10855 a4c676cdde2e52e3ba2a5b7b4309c8c7 623 PANTHER PTHR11624 238 620 0.0 T 22-04-2016 IPR033247 Transketolase family SCD_RS10855 a4c676cdde2e52e3ba2a5b7b4309c8c7 623 SUPERFAMILY SSF52922 489 616 7.98E-35 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SCD_RS10855 a4c676cdde2e52e3ba2a5b7b4309c8c7 623 Pfam PF02780 Transketolase, C-terminal domain 492 608 2.2E-29 T 22-04-2016 IPR033248 Transketolase, C-terminal domain SCD_RS10855 a4c676cdde2e52e3ba2a5b7b4309c8c7 623 Gene3D G3DSA:3.40.50.970 292 492 5.0E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS10855 a4c676cdde2e52e3ba2a5b7b4309c8c7 623 Gene3D G3DSA:3.40.50.970 239 291 2.9E-36 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS10855 a4c676cdde2e52e3ba2a5b7b4309c8c7 623 Gene3D G3DSA:3.40.50.970 8 198 2.9E-36 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS10855 a4c676cdde2e52e3ba2a5b7b4309c8c7 623 ProSitePatterns PS00802 Transketolase signature 2. 422 438 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SCD_RS10855 a4c676cdde2e52e3ba2a5b7b4309c8c7 623 PANTHER PTHR11624:SF20 21 215 0.0 T 22-04-2016 SCD_RS10855 a4c676cdde2e52e3ba2a5b7b4309c8c7 623 PANTHER PTHR11624:SF20 238 620 0.0 T 22-04-2016 SCD_RS10855 a4c676cdde2e52e3ba2a5b7b4309c8c7 623 Gene3D G3DSA:3.40.50.920 493 615 1.6E-39 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SCD_RS10855 a4c676cdde2e52e3ba2a5b7b4309c8c7 623 SUPERFAMILY SSF52518 5 196 3.18E-81 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS10855 a4c676cdde2e52e3ba2a5b7b4309c8c7 623 SUPERFAMILY SSF52518 240 378 3.18E-81 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS10855 a4c676cdde2e52e3ba2a5b7b4309c8c7 623 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 10 613 8.9E-280 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SCD_RS10855 a4c676cdde2e52e3ba2a5b7b4309c8c7 623 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 7 617 47.284 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SCD_RS10855 a4c676cdde2e52e3ba2a5b7b4309c8c7 623 Pfam PF02779 Transketolase, pyrimidine binding domain 315 476 7.3E-41 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SCD_RS10855 a4c676cdde2e52e3ba2a5b7b4309c8c7 623 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 8 279 2.6E-126 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SCD_RS09625 6637103589c6e36381b7e7944f9bd8cd 518 Gene3D G3DSA:3.40.50.300 335 475 1.1E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS09625 6637103589c6e36381b7e7944f9bd8cd 518 Pfam PF01636 Phosphotransferase enzyme family 122 282 3.1E-8 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase SCD_RS09625 6637103589c6e36381b7e7944f9bd8cd 518 PANTHER PTHR12083 7 369 1.9E-133 T 22-04-2016 SCD_RS09625 6637103589c6e36381b7e7944f9bd8cd 518 PANTHER PTHR12083 398 514 1.9E-133 T 22-04-2016 SCD_RS09625 6637103589c6e36381b7e7944f9bd8cd 518 SUPERFAMILY SSF52540 334 512 9.16E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS09625 6637103589c6e36381b7e7944f9bd8cd 518 PANTHER PTHR12083:SF8 7 369 1.9E-133 T 22-04-2016 SCD_RS09625 6637103589c6e36381b7e7944f9bd8cd 518 PANTHER PTHR12083:SF8 398 514 1.9E-133 T 22-04-2016 SCD_RS09625 6637103589c6e36381b7e7944f9bd8cd 518 Gene3D G3DSA:3.90.1200.10 153 295 8.1E-9 T 22-04-2016 SCD_RS09625 6637103589c6e36381b7e7944f9bd8cd 518 SUPERFAMILY SSF56112 11 308 1.09E-22 T 22-04-2016 IPR011009 Protein kinase-like domain SCD_RS09625 6637103589c6e36381b7e7944f9bd8cd 518 Pfam PF13671 AAA domain 336 486 1.2E-32 T 22-04-2016 SCD_RS09930 8e75a223ec690d010cadb9c52e302caf 193 PANTHER PTHR40547:SF1 1 189 7.5E-21 T 22-04-2016 SCD_RS09930 8e75a223ec690d010cadb9c52e302caf 193 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 24 176 2.0E-37 T 22-04-2016 IPR018639 Domain of unknown function DUF2062 SCD_RS09930 8e75a223ec690d010cadb9c52e302caf 193 PANTHER PTHR40547 1 189 7.5E-21 T 22-04-2016 SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 SMART SM00052 764 1010 1.3E-115 T 22-04-2016 IPR001633 EAL domain SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 SMART SM00091 461 529 5.0E-7 T 22-04-2016 IPR000014 PAS domain SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 SMART SM00091 339 406 110.0 T 22-04-2016 IPR000014 PAS domain SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 339 463 2.8E-12 T 22-04-2016 IPR000014 PAS domain SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 469 584 1.2E-22 T 22-04-2016 IPR000014 PAS domain SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 Pfam PF00990 Diguanylate cyclase, GGDEF domain 588 749 1.0E-49 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 Pfam PF00563 EAL domain 770 1005 3.0E-72 T 22-04-2016 IPR001633 EAL domain SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 SMART SM00086 535 577 5.2E-4 T 22-04-2016 IPR001610 PAC motif SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 SMART SM00086 413 456 83.0 T 22-04-2016 IPR001610 PAC motif SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 SUPERFAMILY SSF55073 593 756 3.45E-51 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 586 753 8.5E-43 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 SUPERFAMILY SSF55785 474 586 4.51E-30 T 22-04-2016 IPR000014 PAS domain SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 SUPERFAMILY SSF141868 770 1016 3.14E-90 T 22-04-2016 IPR001633 EAL domain SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 PANTHER PTHR10799:SF774 621 863 1.7E-80 T 22-04-2016 SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 PANTHER PTHR10799:SF774 119 475 1.7E-80 T 22-04-2016 SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 Gene3D G3DSA:3.30.70.270 590 760 8.9E-60 T 22-04-2016 SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 Gene3D G3DSA:3.30.450.20 337 454 2.3E-15 T 22-04-2016 SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 SMART SM00267 577 754 1.3E-62 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 SUPERFAMILY SSF55785 345 458 1.34E-17 T 22-04-2016 IPR000014 PAS domain SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 Gene3D G3DSA:3.30.450.20 472 576 2.5E-29 T 22-04-2016 SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 Pfam PF08448 PAS fold 349 457 2.7E-9 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 PANTHER PTHR10799 621 863 1.7E-80 T 22-04-2016 SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 PANTHER PTHR10799 119 475 1.7E-80 T 22-04-2016 SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 Pfam PF13426 PAS domain 474 576 4.4E-18 T 22-04-2016 IPR000014 PAS domain SCD_RS15805 e00a82018c570ac3ee51c2fabf07e728 1021 Gene3D G3DSA:3.20.20.450 768 1017 1.0E-98 T 22-04-2016 IPR001633 EAL domain SCD_RS03805 13b984beff3ac7f1673a66fa8dfa7f35 76 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 17 33 4.7E-5 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SCD_RS03805 13b984beff3ac7f1673a66fa8dfa7f35 76 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 39 55 4.7E-5 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SCD_RS03805 13b984beff3ac7f1673a66fa8dfa7f35 76 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 4.7E-5 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SCD_RS03805 13b984beff3ac7f1673a66fa8dfa7f35 76 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 58 70 4.7E-5 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SCD_RS03805 13b984beff3ac7f1673a66fa8dfa7f35 76 PANTHER PTHR35177:SF2 1 67 2.3E-14 T 22-04-2016 SCD_RS03805 13b984beff3ac7f1673a66fa8dfa7f35 76 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 69 9.0E-16 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SCD_RS03805 13b984beff3ac7f1673a66fa8dfa7f35 76 Pfam PF01455 HupF/HypC family 1 67 1.1E-20 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SCD_RS03805 13b984beff3ac7f1673a66fa8dfa7f35 76 SUPERFAMILY SSF159127 1 71 1.44E-17 T 22-04-2016 SCD_RS03805 13b984beff3ac7f1673a66fa8dfa7f35 76 PANTHER PTHR35177 1 67 2.3E-14 T 22-04-2016 SCD_RS06135 464dbb6e2143056f2683d62a0a01df92 89 Pfam PF01313 Bacterial export proteins, family 3 6 78 3.7E-32 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SCD_RS06135 464dbb6e2143056f2683d62a0a01df92 89 PANTHER PTHR34040:SF2 1 89 2.6E-38 T 22-04-2016 SCD_RS06135 464dbb6e2143056f2683d62a0a01df92 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 86 5.6E-34 T 22-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 SCD_RS06135 464dbb6e2143056f2683d62a0a01df92 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 6.3E-23 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SCD_RS06135 464dbb6e2143056f2683d62a0a01df92 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 6.3E-23 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SCD_RS06135 464dbb6e2143056f2683d62a0a01df92 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 6.3E-23 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SCD_RS06135 464dbb6e2143056f2683d62a0a01df92 89 PIRSF PIRSF004669 1 89 9.6E-35 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SCD_RS06135 464dbb6e2143056f2683d62a0a01df92 89 PANTHER PTHR34040 1 89 2.6E-38 T 22-04-2016 SCD_RS02070 291a21c9503d1799ac08012d23c5bc05 649 SUPERFAMILY SSF55073 243 400 3.45E-26 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS02070 291a21c9503d1799ac08012d23c5bc05 649 SMART SM00052 410 649 1.2E-45 T 22-04-2016 IPR001633 EAL domain SCD_RS02070 291a21c9503d1799ac08012d23c5bc05 649 PANTHER PTHR33121:SF10 412 649 8.6E-57 T 22-04-2016 SCD_RS02070 291a21c9503d1799ac08012d23c5bc05 649 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 392 3.7E-28 T 22-04-2016 IPR000160 GGDEF domain SCD_RS02070 291a21c9503d1799ac08012d23c5bc05 649 Gene3D G3DSA:3.20.20.450 413 648 1.5E-65 T 22-04-2016 IPR001633 EAL domain SCD_RS02070 291a21c9503d1799ac08012d23c5bc05 649 Pfam PF16448 LapD/MoxY periplasmic domain 25 146 1.2E-44 T 22-04-2016 IPR032244 LapD/MoxY, periplasmic domain SCD_RS02070 291a21c9503d1799ac08012d23c5bc05 649 SUPERFAMILY SSF141868 417 648 4.45E-65 T 22-04-2016 IPR001633 EAL domain SCD_RS02070 291a21c9503d1799ac08012d23c5bc05 649 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 235 393 1.6E-18 T 22-04-2016 IPR000160 GGDEF domain SCD_RS02070 291a21c9503d1799ac08012d23c5bc05 649 PANTHER PTHR33121 412 649 8.6E-57 T 22-04-2016 SCD_RS02070 291a21c9503d1799ac08012d23c5bc05 649 Gene3D G3DSA:3.30.70.270 239 402 6.0E-31 T 22-04-2016 SCD_RS02070 291a21c9503d1799ac08012d23c5bc05 649 SMART SM00267 226 398 1.9E-30 T 22-04-2016 IPR000160 GGDEF domain SCD_RS02070 291a21c9503d1799ac08012d23c5bc05 649 Pfam PF00563 EAL domain 420 648 9.2E-65 T 22-04-2016 IPR001633 EAL domain SCD_RS01960 4a2f53d11cef7901dca76cb06e73b50a 454 SUPERFAMILY SSF53720 5 454 1.31E-140 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SCD_RS01960 4a2f53d11cef7901dca76cb06e73b50a 454 Gene3D G3DSA:3.40.605.10 5 242 1.1E-72 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SCD_RS01960 4a2f53d11cef7901dca76cb06e73b50a 454 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 255 266 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SCD_RS01960 4a2f53d11cef7901dca76cb06e73b50a 454 Pfam PF00171 Aldehyde dehydrogenase family 5 451 2.1E-138 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SCD_RS01960 4a2f53d11cef7901dca76cb06e73b50a 454 PANTHER PTHR11699:SF28 5 453 1.3E-243 T 22-04-2016 SCD_RS01960 4a2f53d11cef7901dca76cb06e73b50a 454 PANTHER PTHR11699 5 453 1.3E-243 T 22-04-2016 SCD_RS01960 4a2f53d11cef7901dca76cb06e73b50a 454 Gene3D G3DSA:3.40.309.10 243 427 1.8E-55 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SCD_RS06290 1b9b7967e53305915d2349ac93df636c 251 SUPERFAMILY SSF103088 122 251 1.96E-31 T 22-04-2016 IPR006665 OmpA-like domain SCD_RS06290 1b9b7967e53305915d2349ac93df636c 251 PANTHER PTHR30329:SF4 1 249 2.2E-73 T 22-04-2016 SCD_RS06290 1b9b7967e53305915d2349ac93df636c 251 Gene3D G3DSA:3.30.1330.60 127 251 7.6E-35 T 22-04-2016 IPR006665 OmpA-like domain SCD_RS06290 1b9b7967e53305915d2349ac93df636c 251 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 56 5.9E-22 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain SCD_RS06290 1b9b7967e53305915d2349ac93df636c 251 Pfam PF00691 OmpA family 149 247 2.8E-19 T 22-04-2016 IPR006665 OmpA-like domain SCD_RS06290 1b9b7967e53305915d2349ac93df636c 251 PANTHER PTHR30329 1 249 2.2E-73 T 22-04-2016 SCD_RS07845 196a334bd100e0c87b9eaa0812b75dd7 525 PANTHER PTHR11918:SF73 105 430 3.4E-39 T 22-04-2016 SCD_RS07845 196a334bd100e0c87b9eaa0812b75dd7 525 Gene3D G3DSA:3.80.30.20 233 433 1.4E-28 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SCD_RS07845 196a334bd100e0c87b9eaa0812b75dd7 525 SUPERFAMILY SSF102114 232 436 1.31E-23 T 22-04-2016 SCD_RS07845 196a334bd100e0c87b9eaa0812b75dd7 525 SMART SM00729 230 444 4.4E-10 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SCD_RS07845 196a334bd100e0c87b9eaa0812b75dd7 525 Pfam PF04055 Radical SAM superfamily 238 401 6.8E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SCD_RS07845 196a334bd100e0c87b9eaa0812b75dd7 525 PANTHER PTHR11918 105 430 3.4E-39 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein SCD_RS04265 29d011399bfc12b1c18764b90b3a0350 318 PANTHER PTHR11935 49 281 1.1E-39 T 22-04-2016 SCD_RS04265 29d011399bfc12b1c18764b90b3a0350 318 PANTHER PTHR11935:SF5 49 281 1.1E-39 T 22-04-2016 SCD_RS04265 29d011399bfc12b1c18764b90b3a0350 318 Pfam PF00753 Metallo-beta-lactamase superfamily 55 242 5.7E-27 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS04265 29d011399bfc12b1c18764b90b3a0350 318 Gene3D G3DSA:3.60.15.10 26 267 1.7E-55 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS04265 29d011399bfc12b1c18764b90b3a0350 318 SMART SM00849 56 242 2.3E-30 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS04265 29d011399bfc12b1c18764b90b3a0350 318 SUPERFAMILY SSF56281 8 292 3.38E-65 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS00975 acb874be77f898fe17a767a46c0a64be 466 Gene3D G3DSA:1.10.8.60 309 386 6.5E-24 T 22-04-2016 SCD_RS00975 acb874be77f898fe17a767a46c0a64be 466 Gene3D G3DSA:3.40.50.2300 2 130 1.4E-35 T 22-04-2016 SCD_RS00975 acb874be77f898fe17a767a46c0a64be 466 PANTHER PTHR32071 1 465 1.6E-227 T 22-04-2016 SCD_RS00975 acb874be77f898fe17a767a46c0a64be 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 440 460 8.6E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS00975 acb874be77f898fe17a767a46c0a64be 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 423 440 8.6E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS00975 acb874be77f898fe17a767a46c0a64be 466 SUPERFAMILY SSF52172 2 181 1.34E-42 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS00975 acb874be77f898fe17a767a46c0a64be 466 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SCD_RS00975 acb874be77f898fe17a767a46c0a64be 466 Pfam PF00072 Response regulator receiver domain 4 113 1.5E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS00975 acb874be77f898fe17a767a46c0a64be 466 Pfam PF00158 Sigma-54 interaction domain 136 302 8.7E-70 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SCD_RS00975 acb874be77f898fe17a767a46c0a64be 466 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 4 457 2.7E-218 T 22-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 SCD_RS00975 acb874be77f898fe17a767a46c0a64be 466 SUPERFAMILY SSF52540 135 379 6.74E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00975 acb874be77f898fe17a767a46c0a64be 466 Pfam PF02954 Bacterial regulatory protein, Fis family 418 457 6.2E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS00975 acb874be77f898fe17a767a46c0a64be 466 SUPERFAMILY SSF46689 376 460 2.91E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS00975 acb874be77f898fe17a767a46c0a64be 466 Gene3D G3DSA:1.10.10.60 390 460 9.6E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS00975 acb874be77f898fe17a767a46c0a64be 466 SMART SM00448 2 113 3.8E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS00975 acb874be77f898fe17a767a46c0a64be 466 SMART SM00382 156 303 1.9E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS00975 acb874be77f898fe17a767a46c0a64be 466 Gene3D G3DSA:3.40.50.300 133 308 1.9E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00975 acb874be77f898fe17a767a46c0a64be 466 PANTHER PTHR32071:SF15 1 465 1.6E-227 T 22-04-2016 SCD_RS00975 acb874be77f898fe17a767a46c0a64be 466 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SCD_RS14210 ae1af21da122c86da4e82e4d16d23645 610 PANTHER PTHR10366:SF256 282 550 4.2E-122 T 22-04-2016 SCD_RS14210 ae1af21da122c86da4e82e4d16d23645 610 SUPERFAMILY SSF51735 283 544 8.95E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS14210 ae1af21da122c86da4e82e4d16d23645 610 Gene3D G3DSA:3.90.25.10 464 542 1.5E-6 T 22-04-2016 SCD_RS14210 ae1af21da122c86da4e82e4d16d23645 610 PANTHER PTHR10366 282 550 4.2E-122 T 22-04-2016 SCD_RS14210 ae1af21da122c86da4e82e4d16d23645 610 SUPERFAMILY SSF51735 143 270 2.6E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS14210 ae1af21da122c86da4e82e4d16d23645 610 Gene3D G3DSA:3.40.50.720 283 463 1.1E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS14210 ae1af21da122c86da4e82e4d16d23645 610 Gene3D G3DSA:3.40.50.720 141 246 2.4E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS14210 ae1af21da122c86da4e82e4d16d23645 610 Pfam PF02719 Polysaccharide biosynthesis protein 283 565 1.9E-121 T 22-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain SCD_RS14210 ae1af21da122c86da4e82e4d16d23645 610 Pfam PF13727 CoA-binding domain 61 233 4.0E-10 T 22-04-2016 SCD_RS12250 b1095349d3a7eed5f877941daa6be523 304 SUPERFAMILY SSF54211 3 124 1.59E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SCD_RS12250 b1095349d3a7eed5f877941daa6be523 304 Gene3D G3DSA:3.30.230.20 3 125 1.1E-44 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SCD_RS12250 b1095349d3a7eed5f877941daa6be523 304 SUPERFAMILY SSF54211 133 277 9.1E-53 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SCD_RS12250 b1095349d3a7eed5f877941daa6be523 304 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 3.0E-109 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SCD_RS12250 b1095349d3a7eed5f877941daa6be523 304 PANTHER PTHR33694 2 304 2.5E-130 T 22-04-2016 SCD_RS12250 b1095349d3a7eed5f877941daa6be523 304 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 295 1.0E-121 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SCD_RS12250 b1095349d3a7eed5f877941daa6be523 304 PANTHER PTHR33694:SF1 2 304 2.5E-130 T 22-04-2016 SCD_RS12250 b1095349d3a7eed5f877941daa6be523 304 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 280 49.86 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SCD_RS12250 b1095349d3a7eed5f877941daa6be523 304 Gene3D G3DSA:3.30.1700.10 128 282 7.0E-61 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SCD_RS09135 3e20897acdf4384141e891e33ee1e64b 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 SCD_RS09135 3e20897acdf4384141e891e33ee1e64b 112 PANTHER PTHR30115 1 112 3.4E-65 T 22-04-2016 SCD_RS09135 3e20897acdf4384141e891e33ee1e64b 112 SUPERFAMILY SSF54913 1 112 2.45E-46 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SCD_RS09135 3e20897acdf4384141e891e33ee1e64b 112 PIRSF PIRSF039144 1 112 1.3E-55 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SCD_RS09135 3e20897acdf4384141e891e33ee1e64b 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 SCD_RS09135 3e20897acdf4384141e891e33ee1e64b 112 Gene3D G3DSA:3.30.70.120 1 112 8.5E-51 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SCD_RS09135 3e20897acdf4384141e891e33ee1e64b 112 SMART SM00938 4 105 3.4E-67 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SCD_RS09135 3e20897acdf4384141e891e33ee1e64b 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.1E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SCD_RS09135 3e20897acdf4384141e891e33ee1e64b 112 PRINTS PR00340 P-II protein signature 2 17 1.8E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SCD_RS09135 3e20897acdf4384141e891e33ee1e64b 112 PRINTS PR00340 P-II protein signature 52 75 1.8E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SCD_RS09135 3e20897acdf4384141e891e33ee1e64b 112 PRINTS PR00340 P-II protein signature 23 41 1.8E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SCD_RS09135 3e20897acdf4384141e891e33ee1e64b 112 PRINTS PR00340 P-II protein signature 83 103 1.8E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SCD_RS10820 09654f617a008e0aeed9cba0b1e4f26a 111 PANTHER PTHR36540:SF1 2 104 1.8E-33 T 22-04-2016 SCD_RS10820 09654f617a008e0aeed9cba0b1e4f26a 111 Pfam PF06865 Protein of unknown function (DUF1255) 11 102 2.9E-37 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 SCD_RS10820 09654f617a008e0aeed9cba0b1e4f26a 111 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 10 103 28.279 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 SCD_RS10820 09654f617a008e0aeed9cba0b1e4f26a 111 SUPERFAMILY SSF51182 10 103 1.48E-35 T 22-04-2016 IPR011051 RmlC-like cupin domain SCD_RS10820 09654f617a008e0aeed9cba0b1e4f26a 111 PANTHER PTHR36540 2 104 1.8E-33 T 22-04-2016 SCD_RS10820 09654f617a008e0aeed9cba0b1e4f26a 111 Gene3D G3DSA:2.60.120.10 10 102 7.4E-38 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SCD_RS07335 ad9cd336e66b7843f7b84f3db02a0c6e 170 SUPERFAMILY SSF46785 5 83 1.47E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS07335 ad9cd336e66b7843f7b84f3db02a0c6e 170 PANTHER PTHR34298 1 170 7.4E-60 T 22-04-2016 SCD_RS07335 ad9cd336e66b7843f7b84f3db02a0c6e 170 Pfam PF04079 Segregation and condensation complex subunit ScpB 13 170 7.8E-50 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SCD_RS07335 ad9cd336e66b7843f7b84f3db02a0c6e 170 Gene3D G3DSA:1.10.10.10 85 161 3.2E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS07335 ad9cd336e66b7843f7b84f3db02a0c6e 170 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 12 169 4.3E-32 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SCD_RS07335 ad9cd336e66b7843f7b84f3db02a0c6e 170 PANTHER PTHR34298:SF2 1 170 7.4E-60 T 22-04-2016 SCD_RS07335 ad9cd336e66b7843f7b84f3db02a0c6e 170 PIRSF PIRSF019345 1 170 9.9E-54 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SCD_RS07335 ad9cd336e66b7843f7b84f3db02a0c6e 170 SUPERFAMILY SSF46785 86 161 3.45E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS07335 ad9cd336e66b7843f7b84f3db02a0c6e 170 Gene3D G3DSA:1.10.10.10 7 82 1.2E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS06335 d0b5afe1ca0a669ebbf40a26240b3135 108 Hamap MF_00460 Protein RnfH [rnfH]. 5 95 26.061 T 22-04-2016 IPR005346 RnfH protein SCD_RS06335 d0b5afe1ca0a669ebbf40a26240b3135 108 SUPERFAMILY SSF54285 5 79 5.23E-25 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SCD_RS06335 d0b5afe1ca0a669ebbf40a26240b3135 108 Pfam PF03658 RnfH family Ubiquitin 5 87 1.2E-35 T 22-04-2016 IPR005346 RnfH protein SCD_RS06335 d0b5afe1ca0a669ebbf40a26240b3135 108 PANTHER PTHR37483 2 107 2.3E-39 T 22-04-2016 SCD_RS06335 d0b5afe1ca0a669ebbf40a26240b3135 108 PANTHER PTHR37483:SF1 2 107 2.3E-39 T 22-04-2016 SCD_RS06335 d0b5afe1ca0a669ebbf40a26240b3135 108 Gene3D G3DSA:3.10.20.280 2 89 5.8E-37 T 22-04-2016 IPR005346 RnfH protein SCD_RS05560 9e61a1105241e76ea166eaf464dafed6 294 PANTHER PTHR24422 1 277 1.1E-110 T 22-04-2016 SCD_RS05560 9e61a1105241e76ea166eaf464dafed6 294 SMART SM00138 16 277 4.2E-92 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SCD_RS05560 9e61a1105241e76ea166eaf464dafed6 294 Pfam PF03705 CheR methyltransferase, all-alpha domain 17 66 9.5E-18 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SCD_RS05560 9e61a1105241e76ea166eaf464dafed6 294 Gene3D G3DSA:1.10.155.10 9 81 9.3E-27 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SCD_RS05560 9e61a1105241e76ea166eaf464dafed6 294 Pfam PF01739 CheR methyltransferase, SAM binding domain 83 273 5.7E-57 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal SCD_RS05560 9e61a1105241e76ea166eaf464dafed6 294 Gene3D G3DSA:3.40.50.150 82 274 2.6E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS05560 9e61a1105241e76ea166eaf464dafed6 294 PRINTS PR00996 Glutamate methyltransferase family signature 76 88 2.6E-42 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SCD_RS05560 9e61a1105241e76ea166eaf464dafed6 294 PRINTS PR00996 Glutamate methyltransferase family signature 217 231 2.6E-42 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SCD_RS05560 9e61a1105241e76ea166eaf464dafed6 294 PRINTS PR00996 Glutamate methyltransferase family signature 38 51 2.6E-42 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SCD_RS05560 9e61a1105241e76ea166eaf464dafed6 294 PRINTS PR00996 Glutamate methyltransferase family signature 236 259 2.6E-42 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SCD_RS05560 9e61a1105241e76ea166eaf464dafed6 294 PRINTS PR00996 Glutamate methyltransferase family signature 111 131 2.6E-42 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SCD_RS05560 9e61a1105241e76ea166eaf464dafed6 294 PRINTS PR00996 Glutamate methyltransferase family signature 145 161 2.6E-42 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SCD_RS05560 9e61a1105241e76ea166eaf464dafed6 294 SUPERFAMILY SSF47757 6 82 8.24E-20 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SCD_RS05560 9e61a1105241e76ea166eaf464dafed6 294 PANTHER PTHR24422:SF13 1 277 1.1E-110 T 22-04-2016 SCD_RS05560 9e61a1105241e76ea166eaf464dafed6 294 PIRSF PIRSF000410 1 278 9.5E-94 T 22-04-2016 IPR026024 Chemotaxis protein methyltransferase CheR SCD_RS05560 9e61a1105241e76ea166eaf464dafed6 294 SUPERFAMILY SSF53335 83 274 4.39E-56 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS05740 7d8ace19fbdf6bbd7a11b0715fc0252e 394 Gene3D G3DSA:1.20.1090.10 190 394 1.4E-40 T 22-04-2016 SCD_RS05740 7d8ace19fbdf6bbd7a11b0715fc0252e 394 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 385 1.6E-93 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 SCD_RS05740 7d8ace19fbdf6bbd7a11b0715fc0252e 394 Gene3D G3DSA:3.40.50.1970 5 189 4.2E-44 T 22-04-2016 SCD_RS05740 7d8ace19fbdf6bbd7a11b0715fc0252e 394 PANTHER PTHR11496 11 392 2.6E-75 T 22-04-2016 SCD_RS05740 7d8ace19fbdf6bbd7a11b0715fc0252e 394 SUPERFAMILY SSF56796 7 392 1.96E-89 T 22-04-2016 SCD_RS06855 49433d7ddd6d86d6de5ff1c258990f04 177 PANTHER PTHR12302 30 176 6.0E-23 T 22-04-2016 SCD_RS06855 49433d7ddd6d86d6de5ff1c258990f04 177 PANTHER PTHR12302:SF0 30 176 6.0E-23 T 22-04-2016 SCD_RS06855 49433d7ddd6d86d6de5ff1c258990f04 177 SUPERFAMILY SSF50199 22 172 2.35E-29 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold SCD_RS06855 49433d7ddd6d86d6de5ff1c258990f04 177 SMART SM00318 24 165 3.7E-16 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold SCD_RS06855 49433d7ddd6d86d6de5ff1c258990f04 177 Pfam PF00565 Staphylococcal nuclease homologue 50 165 1.3E-15 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold SCD_RS06855 49433d7ddd6d86d6de5ff1c258990f04 177 Gene3D G3DSA:2.40.50.90 23 171 8.3E-24 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold SCD_RS04315 97371ef82ba41881104709cd1f3ab76e 220 SMART SM00862 144 216 2.6E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SCD_RS04315 97371ef82ba41881104709cd1f3ab76e 220 PANTHER PTHR26402:SF518 1 220 1.1E-78 T 22-04-2016 SCD_RS04315 97371ef82ba41881104709cd1f3ab76e 220 SUPERFAMILY SSF52172 1 173 1.1E-38 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS04315 97371ef82ba41881104709cd1f3ab76e 220 PANTHER PTHR26402 1 220 1.1E-78 T 22-04-2016 SCD_RS04315 97371ef82ba41881104709cd1f3ab76e 220 Gene3D G3DSA:3.40.50.2300 1 121 4.4E-36 T 22-04-2016 SCD_RS04315 97371ef82ba41881104709cd1f3ab76e 220 Gene3D G3DSA:1.10.10.10 122 216 7.6E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS04315 97371ef82ba41881104709cd1f3ab76e 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 215 7.6E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SCD_RS04315 97371ef82ba41881104709cd1f3ab76e 220 SMART SM00448 1 112 5.6E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS04315 97371ef82ba41881104709cd1f3ab76e 220 Pfam PF00072 Response regulator receiver domain 3 112 1.0E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS06420 6b0f512dea25c097d1725d9f144fbd51 190 PIRSF PIRSF000847 1 190 2.5E-48 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SCD_RS06420 6b0f512dea25c097d1725d9f144fbd51 190 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SCD_RS06420 6b0f512dea25c097d1725d9f144fbd51 190 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 76 3.7E-18 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SCD_RS06420 6b0f512dea25c097d1725d9f144fbd51 190 PANTHER PTHR14269:SF13 2 182 2.8E-72 T 22-04-2016 SCD_RS06420 6b0f512dea25c097d1725d9f144fbd51 190 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 186 1.2E-54 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SCD_RS06420 6b0f512dea25c097d1725d9f144fbd51 190 PANTHER PTHR14269 2 182 2.8E-72 T 22-04-2016 SCD_RS15810 8c80f3e9cdf002dae97d035b3bc179a5 285 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 18 255 1.0E-26 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 SCD_RS15810 8c80f3e9cdf002dae97d035b3bc179a5 285 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 34 285 1.4E-34 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 SCD_RS03840 5a4c20575dd333edfde9b05e2ba1bf0c 349 SUPERFAMILY SSF55326 21 167 1.19E-33 T 22-04-2016 SCD_RS03840 5a4c20575dd333edfde9b05e2ba1bf0c 349 Pfam PF02769 AIR synthase related protein, C-terminal domain 175 326 3.3E-29 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SCD_RS03840 5a4c20575dd333edfde9b05e2ba1bf0c 349 Gene3D G3DSA:3.90.650.10 174 326 2.3E-27 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SCD_RS03840 5a4c20575dd333edfde9b05e2ba1bf0c 349 PIRSF PIRSF005644 14 349 1.5E-127 T 22-04-2016 IPR011854 Hydrogenase expression/formation protein HypE SCD_RS03840 5a4c20575dd333edfde9b05e2ba1bf0c 349 SUPERFAMILY SSF56042 170 345 2.09E-49 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SCD_RS03840 5a4c20575dd333edfde9b05e2ba1bf0c 349 PANTHER PTHR30303 14 349 4.6E-158 T 22-04-2016 SCD_RS03840 5a4c20575dd333edfde9b05e2ba1bf0c 349 Pfam PF00586 AIR synthase related protein, N-terminal domain 63 163 3.5E-16 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SCD_RS03840 5a4c20575dd333edfde9b05e2ba1bf0c 349 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 18 349 1.2E-142 T 22-04-2016 IPR011854 Hydrogenase expression/formation protein HypE SCD_RS03840 5a4c20575dd333edfde9b05e2ba1bf0c 349 PANTHER PTHR30303:SF0 14 349 4.6E-158 T 22-04-2016 SCD_RS03840 5a4c20575dd333edfde9b05e2ba1bf0c 349 Gene3D G3DSA:3.30.1330.10 47 165 1.1E-23 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SCD_RS08420 86a9be4ede5a908b5c80f417d6a525fb 247 PANTHER PTHR30435 1 247 5.5E-88 T 22-04-2016 SCD_RS08420 86a9be4ede5a908b5c80f417d6a525fb 247 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 223 4.1E-57 T 22-04-2016 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 SCD_RS08420 86a9be4ede5a908b5c80f417d6a525fb 247 PANTHER PTHR30435:SF18 1 247 5.5E-88 T 22-04-2016 SCD_RS08420 86a9be4ede5a908b5c80f417d6a525fb 247 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 4.9E-34 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SCD_RS08420 86a9be4ede5a908b5c80f417d6a525fb 247 Pfam PF00460 Flagella basal body rod protein 5 35 2.3E-5 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SCD_RS08420 86a9be4ede5a908b5c80f417d6a525fb 247 SUPERFAMILY SSF117143 77 204 3.53E-20 T 22-04-2016 SCD_RS08420 86a9be4ede5a908b5c80f417d6a525fb 247 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 171 242 1.7E-20 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SCD_RS15830 38c1cdf4725e75a2ad6735fd470f6e82 467 Gene3D G3DSA:3.30.565.10 301 465 1.1E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15830 38c1cdf4725e75a2ad6735fd470f6e82 467 SMART SM00387 354 462 3.4E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15830 38c1cdf4725e75a2ad6735fd470f6e82 467 Gene3D G3DSA:3.30.450.40 15 174 3.1E-26 T 22-04-2016 IPR029016 GAF domain-like SCD_RS15830 38c1cdf4725e75a2ad6735fd470f6e82 467 Pfam PF13185 GAF domain 28 167 3.5E-11 T 22-04-2016 IPR003018 GAF domain GO:0005515 SCD_RS15830 38c1cdf4725e75a2ad6735fd470f6e82 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 419 1.0E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS15830 38c1cdf4725e75a2ad6735fd470f6e82 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 459 1.0E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS15830 38c1cdf4725e75a2ad6735fd470f6e82 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 1.0E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS15830 38c1cdf4725e75a2ad6735fd470f6e82 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 1.0E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS15830 38c1cdf4725e75a2ad6735fd470f6e82 467 SUPERFAMILY SSF47384 206 241 1.67E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS15830 38c1cdf4725e75a2ad6735fd470f6e82 467 PANTHER PTHR24423 278 464 3.4E-90 T 22-04-2016 SCD_RS15830 38c1cdf4725e75a2ad6735fd470f6e82 467 PANTHER PTHR24423 162 239 3.4E-90 T 22-04-2016 SCD_RS15830 38c1cdf4725e75a2ad6735fd470f6e82 467 Gene3D G3DSA:1.10.287.130 206 237 3.1E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS15830 38c1cdf4725e75a2ad6735fd470f6e82 467 Gene3D G3DSA:1.10.287.130 281 300 3.1E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS15830 38c1cdf4725e75a2ad6735fd470f6e82 467 SUPERFAMILY SSF55874 304 463 1.7E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15830 38c1cdf4725e75a2ad6735fd470f6e82 467 SUPERFAMILY SSF55781 13 194 2.78E-27 T 22-04-2016 IPR029016 GAF domain-like SCD_RS15830 38c1cdf4725e75a2ad6735fd470f6e82 467 SMART SM00065 27 176 3.3E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 SCD_RS15830 38c1cdf4725e75a2ad6735fd470f6e82 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 460 2.8E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15830 38c1cdf4725e75a2ad6735fd470f6e82 467 PANTHER PTHR24423:SF497 278 464 3.4E-90 T 22-04-2016 SCD_RS15830 38c1cdf4725e75a2ad6735fd470f6e82 467 PANTHER PTHR24423:SF497 162 239 3.4E-90 T 22-04-2016 SCD_RS03355 e6af339a88fdb0e1883ab799ae06bf44 138 PANTHER PTHR30558:SF7 1 135 8.1E-31 T 22-04-2016 SCD_RS03355 e6af339a88fdb0e1883ab799ae06bf44 138 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 134 1.3E-27 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SCD_RS03355 e6af339a88fdb0e1883ab799ae06bf44 138 PANTHER PTHR30558 1 135 8.1E-31 T 22-04-2016 SCD_RS03355 e6af339a88fdb0e1883ab799ae06bf44 138 TIGRFAM TIGR02801 tolR: protein TolR 9 133 5.7E-40 T 22-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 SCD_RS01900 e3d642829fdbdb65689c755b7f143cf5 228 Pfam PF04055 Radical SAM superfamily 21 161 4.6E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SCD_RS01900 e3d642829fdbdb65689c755b7f143cf5 228 Pfam PF13353 4Fe-4S single cluster domain 15 105 2.2E-7 T 22-04-2016 SCD_RS01900 e3d642829fdbdb65689c755b7f143cf5 228 PANTHER PTHR30352:SF4 3 182 1.3E-29 T 22-04-2016 SCD_RS01900 e3d642829fdbdb65689c755b7f143cf5 228 Gene3D G3DSA:3.20.20.70 15 204 1.3E-25 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS01900 e3d642829fdbdb65689c755b7f143cf5 228 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 3 190 7.1E-63 T 22-04-2016 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein SCD_RS01900 e3d642829fdbdb65689c755b7f143cf5 228 SUPERFAMILY SSF102114 14 211 1.57E-24 T 22-04-2016 SCD_RS01900 e3d642829fdbdb65689c755b7f143cf5 228 PANTHER PTHR30352 3 182 1.3E-29 T 22-04-2016 SCD_RS13165 a461ae72cae93857371e311b2e88e017 236 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 10 220 29.475 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 SCD_RS13165 a461ae72cae93857371e311b2e88e017 236 PANTHER PTHR21343:SF13 11 229 5.6E-89 T 22-04-2016 SCD_RS13165 a461ae72cae93857371e311b2e88e017 236 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 14 184 3.2E-48 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 SCD_RS13165 a461ae72cae93857371e311b2e88e017 236 Pfam PF13500 AAA domain 11 219 4.3E-42 T 22-04-2016 SCD_RS13165 a461ae72cae93857371e311b2e88e017 236 PANTHER PTHR21343 11 229 5.6E-89 T 22-04-2016 SCD_RS13165 a461ae72cae93857371e311b2e88e017 236 SUPERFAMILY SSF52540 11 226 5.07E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13165 a461ae72cae93857371e311b2e88e017 236 Gene3D G3DSA:3.40.50.300 10 220 1.1E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13165 a461ae72cae93857371e311b2e88e017 236 PIRSF PIRSF006755 9 232 6.5E-69 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 SUPERFAMILY SSF52540 436 736 8.05E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 Gene3D G3DSA:1.10.8.60 350 434 2.2E-31 T 22-04-2016 SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 SUPERFAMILY SSF81923 1 141 3.79E-59 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 PANTHER PTHR11638:SF111 1 752 0.0 T 22-04-2016 SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 652 732 1.7E-22 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 PANTHER PTHR11638 1 752 0.0 T 22-04-2016 SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 Pfam PF07724 AAA domain (Cdc48 subfamily) 485 644 6.3E-48 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 60 1.3E-14 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 SMART SM00382 205 349 5.9E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 SMART SM00382 486 649 1.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 733 0.0 T 22-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 Gene3D G3DSA:3.40.50.300 440 663 7.2E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 SUPERFAMILY SSF52540 167 420 7.59E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 517 535 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 341 2.1E-12 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 SMART SM01086 652 742 4.6E-32 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 Gene3D G3DSA:1.10.8.60 664 746 1.9E-28 T 22-04-2016 SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 Gene3D G3DSA:1.10.1780.10 1 141 1.3E-41 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 594 608 1.5E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 532 550 1.5E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 490 508 1.5E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 561 579 1.5E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SCD_RS03945 0fd522d5d4f5b40a2ee521f7b74dc738 754 Gene3D G3DSA:3.40.50.300 170 349 4.4E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06870 b330878d5c5033dc72759570061b88e9 338 Gene3D G3DSA:3.30.1360.120 136 209 4.4E-4 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SCD_RS06870 b330878d5c5033dc72759570061b88e9 338 Gene3D G3DSA:3.30.1360.120 20 47 4.4E-4 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SCD_RS06870 b330878d5c5033dc72759570061b88e9 338 PANTHER PTHR22602 36 282 2.0E-56 T 22-04-2016 SCD_RS06870 b330878d5c5033dc72759570061b88e9 338 PIRSF PIRSF006487 4 318 7.9E-22 T 22-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SCD_RS06870 b330878d5c5033dc72759570061b88e9 338 PANTHER PTHR22602:SF0 36 282 2.0E-56 T 22-04-2016 SCD_RS06870 b330878d5c5033dc72759570061b88e9 338 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 206 269 7.0E-28 T 22-04-2016 IPR017703 YgfZ/GcvT conserved site SCD_RS06870 b330878d5c5033dc72759570061b88e9 338 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 234 4.3E-23 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal SCD_RS06870 b330878d5c5033dc72759570061b88e9 338 Gene3D G3DSA:3.30.70.1400 48 130 1.5E-27 T 22-04-2016 SCD_RS06870 b330878d5c5033dc72759570061b88e9 338 SUPERFAMILY SSF103025 22 260 3.14E-68 T 22-04-2016 SCD_RS06870 b330878d5c5033dc72759570061b88e9 338 SUPERFAMILY SSF101790 262 337 1.05E-11 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain SCD_RS07425 404b12bed9f287d4114850a08f3343fc 430 PANTHER PTHR11739:SF13 11 430 5.4E-201 T 22-04-2016 SCD_RS07425 404b12bed9f287d4114850a08f3343fc 430 Gene3D G3DSA:1.10.230.10 281 374 4.6E-41 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain SCD_RS07425 404b12bed9f287d4114850a08f3343fc 430 PIRSF PIRSF001369 38 430 4.6E-166 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 SCD_RS07425 404b12bed9f287d4114850a08f3343fc 430 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 SCD_RS07425 404b12bed9f287d4114850a08f3343fc 430 SUPERFAMILY SSF48256 6 429 6.67E-167 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SCD_RS07425 404b12bed9f287d4114850a08f3343fc 430 Gene3D G3DSA:1.10.580.10 52 280 1.6E-98 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 SCD_RS07425 404b12bed9f287d4114850a08f3343fc 430 Pfam PF00285 Citrate synthase, C-terminal domain 46 412 4.0E-133 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SCD_RS07425 404b12bed9f287d4114850a08f3343fc 430 PRINTS PR00143 Citrate synthase signature 165 178 3.3E-55 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SCD_RS07425 404b12bed9f287d4114850a08f3343fc 430 PRINTS PR00143 Citrate synthase signature 380 394 3.3E-55 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SCD_RS07425 404b12bed9f287d4114850a08f3343fc 430 PRINTS PR00143 Citrate synthase signature 241 269 3.3E-55 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SCD_RS07425 404b12bed9f287d4114850a08f3343fc 430 PRINTS PR00143 Citrate synthase signature 296 316 3.3E-55 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SCD_RS07425 404b12bed9f287d4114850a08f3343fc 430 PRINTS PR00143 Citrate synthase signature 219 234 3.3E-55 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SCD_RS07425 404b12bed9f287d4114850a08f3343fc 430 PRINTS PR00143 Citrate synthase signature 360 376 3.3E-55 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SCD_RS07425 404b12bed9f287d4114850a08f3343fc 430 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 423 9.0E-232 T 22-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 SCD_RS07425 404b12bed9f287d4114850a08f3343fc 430 PANTHER PTHR11739 11 430 5.4E-201 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SCD_RS02770 b38848a49241ced4fe95084a31ed4101 240 SUPERFAMILY SSF52540 4 236 4.65E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02770 b38848a49241ced4fe95084a31ed4101 240 Pfam PF00005 ABC transporter 19 165 2.9E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS02770 b38848a49241ced4fe95084a31ed4101 240 PANTHER PTHR24220 5 236 7.5E-136 T 22-04-2016 SCD_RS02770 b38848a49241ced4fe95084a31ed4101 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS02770 b38848a49241ced4fe95084a31ed4101 240 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 240 2.7E-117 T 22-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 SCD_RS02770 b38848a49241ced4fe95084a31ed4101 240 PANTHER PTHR24220:SF497 5 236 7.5E-136 T 22-04-2016 SCD_RS02770 b38848a49241ced4fe95084a31ed4101 240 Gene3D G3DSA:3.40.50.300 4 232 7.9E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02770 b38848a49241ced4fe95084a31ed4101 240 SMART SM00382 28 230 4.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS02770 b38848a49241ced4fe95084a31ed4101 240 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 213 235 1.2E-4 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal SCD_RS13120 6f382e293eaf42aa718a36f25235e4b4 327 PANTHER PTHR35457 59 208 6.7E-59 T 22-04-2016 SCD_RS13120 6f382e293eaf42aa718a36f25235e4b4 327 PANTHER PTHR35457 1 43 6.7E-59 T 22-04-2016 SCD_RS13120 6f382e293eaf42aa718a36f25235e4b4 327 PANTHER PTHR35457 231 322 6.7E-59 T 22-04-2016 SCD_RS13120 6f382e293eaf42aa718a36f25235e4b4 327 PANTHER PTHR35457:SF1 59 208 6.7E-59 T 22-04-2016 SCD_RS13120 6f382e293eaf42aa718a36f25235e4b4 327 PANTHER PTHR35457:SF1 1 43 6.7E-59 T 22-04-2016 SCD_RS13120 6f382e293eaf42aa718a36f25235e4b4 327 PANTHER PTHR35457:SF1 231 322 6.7E-59 T 22-04-2016 SCD_RS13120 6f382e293eaf42aa718a36f25235e4b4 327 Pfam PF02628 Cytochrome oxidase assembly protein 4 316 8.3E-85 T 22-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 SCD_RS11990 b7b385775a3644a1bba383d13f8439e7 652 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 15 645 43.872 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 SCD_RS11990 b7b385775a3644a1bba383d13f8439e7 652 SUPERFAMILY SSF51011 542 643 1.73E-33 T 22-04-2016 SCD_RS11990 b7b385775a3644a1bba383d13f8439e7 652 Gene3D G3DSA:3.20.20.80 161 529 3.3E-83 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SCD_RS11990 b7b385775a3644a1bba383d13f8439e7 652 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 546 643 4.3E-23 T 22-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 SCD_RS11990 b7b385775a3644a1bba383d13f8439e7 652 SUPERFAMILY SSF51445 99 534 1.2E-106 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SCD_RS11990 b7b385775a3644a1bba383d13f8439e7 652 PIRSF PIRSF000463 2 651 6.2E-273 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 SCD_RS11990 b7b385775a3644a1bba383d13f8439e7 652 PANTHER PTHR10357:SF160 18 644 0.0 T 22-04-2016 SCD_RS11990 b7b385775a3644a1bba383d13f8439e7 652 SMART SM00642 166 514 2.2E-4 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SCD_RS11990 b7b385775a3644a1bba383d13f8439e7 652 Gene3D G3DSA:2.60.40.1180 542 643 1.4E-36 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta SCD_RS11990 b7b385775a3644a1bba383d13f8439e7 652 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 38 123 1.1E-19 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 SCD_RS11990 b7b385775a3644a1bba383d13f8439e7 652 Pfam PF00128 Alpha amylase, catalytic domain 194 266 2.2E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SCD_RS11990 b7b385775a3644a1bba383d13f8439e7 652 PANTHER PTHR10357 18 644 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SCD_RS11990 b7b385775a3644a1bba383d13f8439e7 652 SUPERFAMILY SSF81296 50 123 4.62E-8 T 22-04-2016 IPR014756 Immunoglobulin E-set SCD_RS11990 b7b385775a3644a1bba383d13f8439e7 652 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 23 643 6.1E-275 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 SCD_RS11990 b7b385775a3644a1bba383d13f8439e7 652 Gene3D G3DSA:2.60.40.10 27 138 7.7E-33 T 22-04-2016 IPR013783 Immunoglobulin-like fold SCD_RS13730 98a5ee47f48ab332763c2ace03567cd0 153 PANTHER PTHR35603 3 151 3.3E-31 T 22-04-2016 SCD_RS13730 98a5ee47f48ab332763c2ace03567cd0 153 Pfam PF05433 Glycine zipper 2TM domain 62 102 5.9E-8 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 SCD_RS12845 40946f49c4e87a6332f8d8ea560b2336 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 177 5.3E-22 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS12845 40946f49c4e87a6332f8d8ea560b2336 179 SUPERFAMILY SSF88659 127 179 6.54E-13 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS12845 40946f49c4e87a6332f8d8ea560b2336 179 PANTHER PTHR30173:SF3 1 179 5.2E-29 T 22-04-2016 SCD_RS12845 40946f49c4e87a6332f8d8ea560b2336 179 Pfam PF04542 Sigma-70 region 2 27 90 1.3E-11 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS12845 40946f49c4e87a6332f8d8ea560b2336 179 SUPERFAMILY SSF88946 5 95 2.83E-20 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS12845 40946f49c4e87a6332f8d8ea560b2336 179 Gene3D G3DSA:1.10.10.10 123 178 5.6E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS12845 40946f49c4e87a6332f8d8ea560b2336 179 PANTHER PTHR30173 1 179 5.2E-29 T 22-04-2016 SCD_RS12845 40946f49c4e87a6332f8d8ea560b2336 179 Gene3D G3DSA:1.10.1740.10 5 95 1.1E-19 T 22-04-2016 SCD_RS12845 40946f49c4e87a6332f8d8ea560b2336 179 Pfam PF08281 Sigma-70, region 4 126 172 5.0E-12 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS09720 d944c64b1ec12e9a835f1c918d0f8487 456 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 3 456 8.0E-175 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 SCD_RS09720 d944c64b1ec12e9a835f1c918d0f8487 456 Gene3D G3DSA:3.80.30.20 51 245 2.5E-28 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SCD_RS09720 d944c64b1ec12e9a835f1c918d0f8487 456 PIRSF PIRSF000167 2 452 7.2E-164 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 SCD_RS09720 d944c64b1ec12e9a835f1c918d0f8487 456 PANTHER PTHR13932 1 449 6.4E-202 T 22-04-2016 SCD_RS09720 d944c64b1ec12e9a835f1c918d0f8487 456 SMART SM00729 49 267 1.4E-50 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SCD_RS09720 d944c64b1ec12e9a835f1c918d0f8487 456 PANTHER PTHR13932:SF6 1 449 6.4E-202 T 22-04-2016 SCD_RS09720 d944c64b1ec12e9a835f1c918d0f8487 456 SUPERFAMILY SSF102114 4 442 8.89E-134 T 22-04-2016 SCD_RS09720 d944c64b1ec12e9a835f1c918d0f8487 456 Pfam PF04055 Radical SAM superfamily 54 226 9.0E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SCD_RS09720 d944c64b1ec12e9a835f1c918d0f8487 456 Pfam PF06969 HemN C-terminal domain 362 429 2.5E-6 T 22-04-2016 IPR010723 HemN, C-terminal SCD_RS04135 a6d20b5958b8f547eb5b4c4a960373e4 252 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 16 249 4.8E-40 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SCD_RS04135 a6d20b5958b8f547eb5b4c4a960373e4 252 Pfam PF13533 Biotin-lipoyl like 32 77 2.3E-7 T 22-04-2016 SCD_RS04135 a6d20b5958b8f547eb5b4c4a960373e4 252 Gene3D G3DSA:2.40.50.100 139 164 4.6E-13 T 22-04-2016 SCD_RS04135 a6d20b5958b8f547eb5b4c4a960373e4 252 Gene3D G3DSA:2.40.50.100 31 64 4.6E-13 T 22-04-2016 SCD_RS04135 a6d20b5958b8f547eb5b4c4a960373e4 252 Pfam PF13437 HlyD family secretion protein 142 237 7.0E-11 T 22-04-2016 SCD_RS04135 a6d20b5958b8f547eb5b4c4a960373e4 252 SUPERFAMILY SSF111369 21 200 5.23E-23 T 22-04-2016 SCD_RS04135 a6d20b5958b8f547eb5b4c4a960373e4 252 PANTHER PTHR30469 4 203 1.5E-28 T 22-04-2016 SCD_RS03195 9957ac5e4ad947f7b683f06917bb7600 64 Gene3D G3DSA:3.30.1390.20 8 63 7.4E-29 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain SCD_RS03195 9957ac5e4ad947f7b683f06917bb7600 64 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 10 63 8.8E-24 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 SCD_RS03195 9957ac5e4ad947f7b683f06917bb7600 64 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 4 64 20.843 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 SCD_RS03195 9957ac5e4ad947f7b683f06917bb7600 64 PIRSF PIRSF002211 1 64 2.3E-26 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 SCD_RS03195 9957ac5e4ad947f7b683f06917bb7600 64 PANTHER PTHR15892 7 61 3.1E-23 T 22-04-2016 SCD_RS03195 9957ac5e4ad947f7b683f06917bb7600 64 SUPERFAMILY SSF55129 9 63 1.03E-20 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain SCD_RS03195 9957ac5e4ad947f7b683f06917bb7600 64 Pfam PF00327 Ribosomal protein L30p/L7e 10 60 2.2E-19 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain SCD_RS02750 251020077b21f581491a341c2d859e4f 316 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 4 307 5.1E-107 T 22-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 SCD_RS02750 251020077b21f581491a341c2d859e4f 316 Pfam PF07475 HPr Serine kinase C-terminal domain 134 304 5.1E-65 T 22-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 SCD_RS02750 251020077b21f581491a341c2d859e4f 316 SUPERFAMILY SSF53795 137 306 1.4E-36 T 22-04-2016 SCD_RS02750 251020077b21f581491a341c2d859e4f 316 PANTHER PTHR30305:SF1 1 316 1.4E-99 T 22-04-2016 SCD_RS02750 251020077b21f581491a341c2d859e4f 316 SUPERFAMILY SSF75138 1 135 1.83E-31 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SCD_RS02750 251020077b21f581491a341c2d859e4f 316 Gene3D G3DSA:3.40.1390.20 8 134 2.5E-32 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SCD_RS02750 251020077b21f581491a341c2d859e4f 316 Pfam PF02603 HPr Serine kinase N terminus 4 131 9.3E-28 T 22-04-2016 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 SCD_RS02750 251020077b21f581491a341c2d859e4f 316 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 3 312 36.843 T 22-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 SCD_RS02750 251020077b21f581491a341c2d859e4f 316 PANTHER PTHR30305 1 316 1.4E-99 T 22-04-2016 SCD_RS02750 251020077b21f581491a341c2d859e4f 316 Gene3D G3DSA:3.40.50.300 138 310 1.2E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12260 70966576c01fd81844b3d49bbb036f3f 412 Hamap MF_02033 Cell division protein FtsA [ftsA]. 7 412 31.935 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SCD_RS12260 70966576c01fd81844b3d49bbb036f3f 412 Pfam PF02491 SHS2 domain inserted in FTSA 86 163 8.5E-32 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 SCD_RS12260 70966576c01fd81844b3d49bbb036f3f 412 SMART SM00842 11 197 1.9E-108 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 SCD_RS12260 70966576c01fd81844b3d49bbb036f3f 412 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 10 378 3.0E-153 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SCD_RS12260 70966576c01fd81844b3d49bbb036f3f 412 PIRSF PIRSF003101 2 412 8.2E-160 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SCD_RS12260 70966576c01fd81844b3d49bbb036f3f 412 SUPERFAMILY SSF53067 10 198 5.27E-64 T 22-04-2016 SCD_RS12260 70966576c01fd81844b3d49bbb036f3f 412 Gene3D G3DSA:3.30.1490.110 87 157 2.6E-19 T 22-04-2016 SCD_RS12260 70966576c01fd81844b3d49bbb036f3f 412 PANTHER PTHR32432:SF4 1 409 1.2E-165 T 22-04-2016 SCD_RS12260 70966576c01fd81844b3d49bbb036f3f 412 PANTHER PTHR32432 1 409 1.2E-165 T 22-04-2016 SCD_RS12260 70966576c01fd81844b3d49bbb036f3f 412 SUPERFAMILY SSF53067 200 378 1.2E-49 T 22-04-2016 SCD_RS12260 70966576c01fd81844b3d49bbb036f3f 412 Gene3D G3DSA:3.30.420.40 3 84 4.8E-28 T 22-04-2016 SCD_RS12260 70966576c01fd81844b3d49bbb036f3f 412 Gene3D G3DSA:3.30.420.40 158 210 4.8E-28 T 22-04-2016 SCD_RS12260 70966576c01fd81844b3d49bbb036f3f 412 Gene3D G3DSA:3.30.420.40 211 235 9.6E-34 T 22-04-2016 SCD_RS12260 70966576c01fd81844b3d49bbb036f3f 412 Gene3D G3DSA:3.30.420.40 299 353 9.6E-34 T 22-04-2016 SCD_RS12260 70966576c01fd81844b3d49bbb036f3f 412 Gene3D G3DSA:3.90.640.10 236 298 2.3E-20 T 22-04-2016 SCD_RS12260 70966576c01fd81844b3d49bbb036f3f 412 Pfam PF14450 Cell division protein FtsA 12 195 6.1E-11 T 22-04-2016 SCD_RS12260 70966576c01fd81844b3d49bbb036f3f 412 Pfam PF14450 Cell division protein FtsA 208 375 1.9E-26 T 22-04-2016 SCD_RS11160 39c9025192862a4b53bfd39581ebf586 248 PANTHER PTHR10108:SF911 76 234 7.7E-28 T 22-04-2016 SCD_RS11160 39c9025192862a4b53bfd39581ebf586 248 PANTHER PTHR10108 76 234 7.7E-28 T 22-04-2016 SCD_RS11160 39c9025192862a4b53bfd39581ebf586 248 Gene3D G3DSA:3.40.50.150 39 234 3.1E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS11160 39c9025192862a4b53bfd39581ebf586 248 SUPERFAMILY SSF53335 16 231 2.34E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS11160 39c9025192862a4b53bfd39581ebf586 248 Pfam PF13847 Methyltransferase domain 75 184 1.9E-25 T 22-04-2016 IPR025714 Methyltransferase domain SCD_RS08090 e05de1bf2edefff588acf34142c17137 292 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 291 4.0E-93 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SCD_RS08090 e05de1bf2edefff588acf34142c17137 292 SUPERFAMILY SSF54713 56 147 9.68E-23 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SCD_RS08090 e05de1bf2edefff588acf34142c17137 292 PANTHER PTHR11741 1 291 4.0E-120 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SCD_RS08090 e05de1bf2edefff588acf34142c17137 292 SUPERFAMILY SSF46934 3 56 2.65E-14 T 22-04-2016 IPR009060 UBA-like GO:0005515 SCD_RS08090 e05de1bf2edefff588acf34142c17137 292 Gene3D G3DSA:3.30.479.20 237 272 2.2E-26 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SCD_RS08090 e05de1bf2edefff588acf34142c17137 292 Gene3D G3DSA:3.30.479.20 154 188 2.2E-26 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SCD_RS08090 e05de1bf2edefff588acf34142c17137 292 SUPERFAMILY SSF54713 152 290 2.09E-50 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SCD_RS08090 e05de1bf2edefff588acf34142c17137 292 Hamap MF_00050 Elongation factor Ts [tsf]. 1 290 78.592 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SCD_RS08090 e05de1bf2edefff588acf34142c17137 292 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 SCD_RS08090 e05de1bf2edefff588acf34142c17137 292 Gene3D G3DSA:1.10.8.10 2 55 8.9E-22 T 22-04-2016 SCD_RS08090 e05de1bf2edefff588acf34142c17137 292 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 SCD_RS08090 e05de1bf2edefff588acf34142c17137 292 Gene3D G3DSA:3.30.479.20 57 149 2.3E-21 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SCD_RS08090 e05de1bf2edefff588acf34142c17137 292 Gene3D G3DSA:1.10.286.20 193 236 1.1E-22 T 22-04-2016 SCD_RS08090 e05de1bf2edefff588acf34142c17137 292 Pfam PF00889 Elongation factor TS 73 273 1.7E-68 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SCD_RS09470 0356b53f4e4745d058fd10bd4aa37796 103 Pfam PF11582 Protein of unknown function (DUF3240) 5 102 4.4E-27 T 22-04-2016 IPR021634 Protein of unknown function DUF3240 SCD_RS09470 0356b53f4e4745d058fd10bd4aa37796 103 SUPERFAMILY SSF54913 7 100 1.05E-5 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SCD_RS09470 0356b53f4e4745d058fd10bd4aa37796 103 Gene3D G3DSA:3.30.70.120 7 102 2.0E-22 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SCD_RS10330 4960059943fabb24e896944f84e6e873 947 SUPERFAMILY SSF51998 836 904 1.07E-178 T 22-04-2016 SCD_RS10330 4960059943fabb24e896944f84e6e873 947 SUPERFAMILY SSF51998 366 805 1.07E-178 T 22-04-2016 SCD_RS10330 4960059943fabb24e896944f84e6e873 947 Gene3D G3DSA:3.20.70.20 543 700 1.3E-84 T 22-04-2016 SCD_RS10330 4960059943fabb24e896944f84e6e873 947 Gene3D G3DSA:3.20.70.20 756 801 1.3E-84 T 22-04-2016 SCD_RS10330 4960059943fabb24e896944f84e6e873 947 Gene3D G3DSA:3.20.70.20 862 903 1.3E-84 T 22-04-2016 SCD_RS10330 4960059943fabb24e896944f84e6e873 947 Gene3D G3DSA:3.20.70.20 287 488 1.3E-84 T 22-04-2016 SCD_RS10330 4960059943fabb24e896944f84e6e873 947 SUPERFAMILY SSF48168 153 365 3.14E-61 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SCD_RS10330 4960059943fabb24e896944f84e6e873 947 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 290 363 1.2E-21 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SCD_RS10330 4960059943fabb24e896944f84e6e873 947 PANTHER PTHR11573 147 947 0.0 T 22-04-2016 SCD_RS10330 4960059943fabb24e896944f84e6e873 947 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 293 904 1.1E-211 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SCD_RS10330 4960059943fabb24e896944f84e6e873 947 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 745 767 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS10330 4960059943fabb24e896944f84e6e873 947 Pfam PF02867 Ribonucleotide reductase, barrel domain 367 901 8.4E-180 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS10330 4960059943fabb24e896944f84e6e873 947 PRINTS PR01183 Ribonucleotide reductase large chain signature 652 674 5.4E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS10330 4960059943fabb24e896944f84e6e873 947 PRINTS PR01183 Ribonucleotide reductase large chain signature 614 637 5.4E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS10330 4960059943fabb24e896944f84e6e873 947 PRINTS PR01183 Ribonucleotide reductase large chain signature 680 703 5.4E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS10330 4960059943fabb24e896944f84e6e873 947 PRINTS PR01183 Ribonucleotide reductase large chain signature 577 588 5.4E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS10330 4960059943fabb24e896944f84e6e873 947 PRINTS PR01183 Ribonucleotide reductase large chain signature 442 461 5.4E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS10330 4960059943fabb24e896944f84e6e873 947 PRINTS PR01183 Ribonucleotide reductase large chain signature 756 783 5.4E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS10330 4960059943fabb24e896944f84e6e873 947 Pfam PF03477 ATP cone domain 154 235 1.8E-5 T 22-04-2016 IPR005144 ATP-cone domain SCD_RS10330 4960059943fabb24e896944f84e6e873 947 Pfam PF03477 ATP cone domain 35 131 9.8E-18 T 22-04-2016 IPR005144 ATP-cone domain SCD_RS00955 fd6c1555df6888d378f61eee6bdcb6da 389 PANTHER PTHR11562 2 311 1.2E-86 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SCD_RS00955 fd6c1555df6888d378f61eee6bdcb6da 389 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 24 303 7.6E-65 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SCD_RS00955 fd6c1555df6888d378f61eee6bdcb6da 389 Pfam PF01545 Cation efflux family 28 221 1.2E-41 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SCD_RS00955 fd6c1555df6888d378f61eee6bdcb6da 389 PANTHER PTHR11562:SF18 2 311 1.2E-86 T 22-04-2016 SCD_RS00955 fd6c1555df6888d378f61eee6bdcb6da 389 SUPERFAMILY SSF160240 224 304 3.27E-22 T 22-04-2016 SCD_RS00955 fd6c1555df6888d378f61eee6bdcb6da 389 Gene3D G3DSA:3.30.70.1350 222 304 7.4E-27 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain SCD_RS00955 fd6c1555df6888d378f61eee6bdcb6da 389 Pfam PF16916 Dimerisation domain of Zinc Transporter 225 302 1.4E-23 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain SCD_RS00955 fd6c1555df6888d378f61eee6bdcb6da 389 SUPERFAMILY SSF161111 20 222 7.98E-52 T 22-04-2016 SCD_RS00955 fd6c1555df6888d378f61eee6bdcb6da 389 Gene3D G3DSA:1.20.1510.10 24 220 7.7E-43 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain SCD_RS07455 2c450460ddf7ae275650beb57379aa59 635 Pfam PF00501 AMP-binding enzyme 60 503 3.9E-77 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SCD_RS07455 2c450460ddf7ae275650beb57379aa59 635 PANTHER PTHR24095 4 629 0.0 T 22-04-2016 SCD_RS07455 2c450460ddf7ae275650beb57379aa59 635 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 58 1.6E-23 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 SCD_RS07455 2c450460ddf7ae275650beb57379aa59 635 Gene3D G3DSA:3.30.300.30 498 611 2.1E-26 T 22-04-2016 SCD_RS07455 2c450460ddf7ae275650beb57379aa59 635 Pfam PF13193 AMP-binding enzyme C-terminal domain 512 595 3.9E-25 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SCD_RS07455 2c450460ddf7ae275650beb57379aa59 635 PANTHER PTHR24095:SF165 4 629 0.0 T 22-04-2016 SCD_RS07455 2c450460ddf7ae275650beb57379aa59 635 ProSitePatterns PS00455 Putative AMP-binding domain signature. 239 250 - T 22-04-2016 IPR020845 AMP-binding, conserved site SCD_RS07455 2c450460ddf7ae275650beb57379aa59 635 SUPERFAMILY SSF56801 3 624 5.36E-161 T 22-04-2016 SCD_RS07455 2c450460ddf7ae275650beb57379aa59 635 Gene3D G3DSA:3.40.50.980 55 243 1.6E-41 T 22-04-2016 SCD_RS07455 2c450460ddf7ae275650beb57379aa59 635 TIGRFAM TIGR02316 propion_prpE: propionate--CoA ligase 3 629 0.0 T 22-04-2016 IPR012694 Propionate--CoA ligase GO:0019629|GO:0050218 KEGG: 00640+6.2.1.17|MetaCyc: PWY-3941|MetaCyc: PWY-5104|MetaCyc: PWY-5747|UniPathway: UPA00946 SCD_RS07455 2c450460ddf7ae275650beb57379aa59 635 Gene3D G3DSA:3.40.50.980 244 398 2.4E-29 T 22-04-2016 SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 Gene3D G3DSA:1.20.1640.10 284 495 1.6E-54 T 22-04-2016 SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 Gene3D G3DSA:1.10.3850.10 813 1007 1.3E-57 T 22-04-2016 SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 SUPERFAMILY SSF82866 289 490 2.22E-46 T 22-04-2016 SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 SUPERFAMILY SSF82866 788 1007 1.01E-47 T 22-04-2016 SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 9.9E-64 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 9.9E-64 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 9.9E-64 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 9.9E-64 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 9.9E-64 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 9.9E-64 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 9.9E-64 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 PRINTS PR00702 Acriflavin resistance protein family signature 607 621 9.9E-64 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 9.9E-64 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 PANTHER PTHR32063 1 1023 0.0 T 22-04-2016 SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 Pfam PF00873 AcrB/AcrD/AcrF family 5 1006 1.4E-270 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 SUPERFAMILY SSF82693 554 654 6.02E-19 T 22-04-2016 SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 Gene3D G3DSA:3.30.70.1430 40 141 7.5E-29 T 22-04-2016 SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 SUPERFAMILY SSF82714 182 263 1.7E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 SUPERFAMILY SSF82693 40 133 6.63E-25 T 22-04-2016 SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 Gene3D G3DSA:3.30.70.1430 557 653 1.2E-13 T 22-04-2016 SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 SUPERFAMILY SSF82714 701 789 8.11E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 Gene3D G3DSA:3.30.2090.10 701 789 1.7E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 SUPERFAMILY SSF82693 135 180 3.92E-18 T 22-04-2016 SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 SUPERFAMILY SSF82693 266 321 3.92E-18 T 22-04-2016 SCD_RS00875 34b5861d0602c65fbbf6c08562b4918a 1023 Gene3D G3DSA:3.30.2090.10 181 266 9.6E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS08190 6803084e0562111f5fbc27add6319113 354 Gene3D G3DSA:3.40.50.720 4 191 4.6E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS08190 6803084e0562111f5fbc27add6319113 354 PANTHER PTHR10366 10 349 6.7E-144 T 22-04-2016 SCD_RS08190 6803084e0562111f5fbc27add6319113 354 Gene3D G3DSA:3.90.25.10 192 348 7.5E-46 T 22-04-2016 SCD_RS08190 6803084e0562111f5fbc27add6319113 354 SUPERFAMILY SSF51735 2 337 2.11E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS08190 6803084e0562111f5fbc27add6319113 354 PANTHER PTHR10366:SF33 10 349 6.7E-144 T 22-04-2016 SCD_RS08190 6803084e0562111f5fbc27add6319113 354 Pfam PF16363 GDP-mannose 4,6 dehydratase 12 322 6.1E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS08190 6803084e0562111f5fbc27add6319113 354 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 5 347 1.8E-152 T 22-04-2016 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833|UniPathway: UPA00055|UniPathway: UPA00281 SCD_RS02845 d4898e26e523ccf8702ffa4057baa127 608 Pfam PF07655 Secretin N-terminal domain 137 205 4.0E-5 T 22-04-2016 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 SCD_RS02845 d4898e26e523ccf8702ffa4057baa127 608 PRINTS PR00811 Bacterial general secretion pathway protein D signature 556 570 1.1E-15 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS02845 d4898e26e523ccf8702ffa4057baa127 608 PRINTS PR00811 Bacterial general secretion pathway protein D signature 312 322 1.1E-15 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS02845 d4898e26e523ccf8702ffa4057baa127 608 PRINTS PR00811 Bacterial general secretion pathway protein D signature 533 551 1.1E-15 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS02845 d4898e26e523ccf8702ffa4057baa127 608 PRINTS PR00811 Bacterial general secretion pathway protein D signature 383 407 1.1E-15 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS02845 d4898e26e523ccf8702ffa4057baa127 608 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 277 568 1.5E-77 T 22-04-2016 IPR013358 Pilus biogenesis, MshL SCD_RS02845 d4898e26e523ccf8702ffa4057baa127 608 Pfam PF00263 Bacterial type II and III secretion system protein 388 569 1.1E-37 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 SCD_RS02845 d4898e26e523ccf8702ffa4057baa127 608 PANTHER PTHR30332 277 569 2.8E-47 T 22-04-2016 SCD_RS14550 862bf88511a9d1cefd90d196aa0cb4b2 777 Pfam PF00912 Transglycosylase 57 232 9.0E-64 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SCD_RS14550 862bf88511a9d1cefd90d196aa0cb4b2 777 Pfam PF17092 Penicillin-binding protein OB-like domain 318 422 1.3E-20 T 22-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 SCD_RS14550 862bf88511a9d1cefd90d196aa0cb4b2 777 Pfam PF00905 Penicillin binding protein transpeptidase domain 429 669 2.3E-36 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SCD_RS14550 862bf88511a9d1cefd90d196aa0cb4b2 777 Gene3D G3DSA:3.40.710.10 235 315 3.5E-136 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS14550 862bf88511a9d1cefd90d196aa0cb4b2 777 Gene3D G3DSA:3.40.710.10 419 754 3.5E-136 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS14550 862bf88511a9d1cefd90d196aa0cb4b2 777 Gene3D G3DSA:1.10.3810.10 58 234 7.3E-74 T 22-04-2016 SCD_RS14550 862bf88511a9d1cefd90d196aa0cb4b2 777 PANTHER PTHR32282 1 312 2.5E-249 T 22-04-2016 SCD_RS14550 862bf88511a9d1cefd90d196aa0cb4b2 777 PANTHER PTHR32282 418 755 2.5E-249 T 22-04-2016 SCD_RS14550 862bf88511a9d1cefd90d196aa0cb4b2 777 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 67 708 4.1E-189 T 22-04-2016 SCD_RS14550 862bf88511a9d1cefd90d196aa0cb4b2 777 SUPERFAMILY SSF53955 44 258 2.0E-77 T 22-04-2016 IPR023346 Lysozyme-like domain SCD_RS14550 862bf88511a9d1cefd90d196aa0cb4b2 777 Gene3D G3DSA:2.40.50.140 350 418 8.7E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS14550 862bf88511a9d1cefd90d196aa0cb4b2 777 PANTHER PTHR32282:SF5 1 312 2.5E-249 T 22-04-2016 SCD_RS14550 862bf88511a9d1cefd90d196aa0cb4b2 777 PANTHER PTHR32282:SF5 418 755 2.5E-249 T 22-04-2016 SCD_RS14550 862bf88511a9d1cefd90d196aa0cb4b2 777 SUPERFAMILY SSF56601 213 235 1.33E-126 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS14550 862bf88511a9d1cefd90d196aa0cb4b2 777 SUPERFAMILY SSF56601 264 315 1.33E-126 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS14550 862bf88511a9d1cefd90d196aa0cb4b2 777 SUPERFAMILY SSF56601 419 751 1.33E-126 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS12275 d6d3405d50585f09e430ea2e468971e2 320 PANTHER PTHR21071 1 313 3.0E-107 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS12275 d6d3405d50585f09e430ea2e468971e2 320 Gene3D G3DSA:3.90.78.10 234 307 7.0E-34 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS12275 d6d3405d50585f09e430ea2e468971e2 320 SUPERFAMILY SSF56194 205 307 1.09E-35 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS12275 d6d3405d50585f09e430ea2e468971e2 320 Gene3D G3DSA:3.30.43.10 15 82 3.7E-16 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SCD_RS12275 d6d3405d50585f09e430ea2e468971e2 320 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 22 306 3.2E-61 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS12275 d6d3405d50585f09e430ea2e468971e2 320 PANTHER PTHR21071:SF4 1 313 3.0E-107 T 22-04-2016 SCD_RS12275 d6d3405d50585f09e430ea2e468971e2 320 Gene3D G3DSA:3.30.465.10 102 233 2.5E-37 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SCD_RS12275 d6d3405d50585f09e430ea2e468971e2 320 Pfam PF01565 FAD binding domain 37 168 4.1E-16 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SCD_RS12275 d6d3405d50585f09e430ea2e468971e2 320 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 320 88.949 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS12275 d6d3405d50585f09e430ea2e468971e2 320 SUPERFAMILY SSF56176 21 216 5.82E-38 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SCD_RS12275 d6d3405d50585f09e430ea2e468971e2 320 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 208 305 1.1E-30 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS00850 ca590820694230e5e4dc0bf0cd7d7afe 103 PANTHER PTHR16821 1 103 1.7E-26 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 SCD_RS00850 ca590820694230e5e4dc0bf0cd7d7afe 103 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 22-04-2016 IPR020895 Frataxin conserved site SCD_RS00850 ca590820694230e5e4dc0bf0cd7d7afe 103 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 2.5E-39 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 SCD_RS00850 ca590820694230e5e4dc0bf0cd7d7afe 103 Pfam PF01491 Frataxin-like domain 1 100 2.2E-27 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 SCD_RS00850 ca590820694230e5e4dc0bf0cd7d7afe 103 Gene3D G3DSA:3.30.920.10 1 103 1.2E-30 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 SCD_RS00850 ca590820694230e5e4dc0bf0cd7d7afe 103 SUPERFAMILY SSF55387 1 100 1.2E-34 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 SCD_RS00850 ca590820694230e5e4dc0bf0cd7d7afe 103 Hamap MF_00142 Protein CyaY [cyaY]. 1 103 26.502 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 SCD_RS00850 ca590820694230e5e4dc0bf0cd7d7afe 103 SMART SM01219 1 102 1.2E-45 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 SCD_RS01535 c632b023cacd310467be57421397f11a 138 SUPERFAMILY SSF51735 3 132 2.03E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS01535 c632b023cacd310467be57421397f11a 138 Pfam PF13380 CoA binding domain 19 130 1.1E-35 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SCD_RS01535 c632b023cacd310467be57421397f11a 138 PANTHER PTHR33303 3 133 1.6E-40 T 22-04-2016 SCD_RS01535 c632b023cacd310467be57421397f11a 138 SMART SM00881 14 107 7.0E-18 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SCD_RS01535 c632b023cacd310467be57421397f11a 138 Gene3D G3DSA:3.40.50.720 3 132 1.1E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS02835 186d18108d1854271cac6c29ecffd21f 576 SUPERFAMILY SSF160246 5 148 1.1E-30 T 22-04-2016 SCD_RS02835 186d18108d1854271cac6c29ecffd21f 576 PANTHER PTHR30258 1 570 3.1E-184 T 22-04-2016 SCD_RS02835 186d18108d1854271cac6c29ecffd21f 576 Gene3D G3DSA:3.40.50.300 292 564 5.1E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02835 186d18108d1854271cac6c29ecffd21f 576 PANTHER PTHR30258:SF2 1 570 3.1E-184 T 22-04-2016 SCD_RS02835 186d18108d1854271cac6c29ecffd21f 576 SUPERFAMILY SSF52540 177 560 2.12E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02835 186d18108d1854271cac6c29ecffd21f 576 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 151 8.8E-19 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 SCD_RS02835 186d18108d1854271cac6c29ecffd21f 576 SMART SM00382 314 456 6.2E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS02835 186d18108d1854271cac6c29ecffd21f 576 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 381 395 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SCD_RS02835 186d18108d1854271cac6c29ecffd21f 576 Gene3D G3DSA:3.30.450.90 166 286 8.1E-46 T 22-04-2016 SCD_RS02835 186d18108d1854271cac6c29ecffd21f 576 Pfam PF00437 Type II/IV secretion system protein 191 453 4.3E-74 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SCD_RS03785 861c84c2644ea6784656e89fcecf3a44 321 Pfam PF12800 4Fe-4S binding domain 44 56 0.0015 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS03785 861c84c2644ea6784656e89fcecf3a44 321 Pfam PF13247 4Fe-4S dicluster domain 106 201 1.5E-20 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS03785 861c84c2644ea6784656e89fcecf3a44 321 Gene3D G3DSA:3.30.70.20 110 150 1.4E-17 T 22-04-2016 SCD_RS03785 861c84c2644ea6784656e89fcecf3a44 321 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS03785 861c84c2644ea6784656e89fcecf3a44 321 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 23 2.9E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SCD_RS03785 861c84c2644ea6784656e89fcecf3a44 321 SUPERFAMILY SSF54862 36 315 4.5E-64 T 22-04-2016 SCD_RS03785 861c84c2644ea6784656e89fcecf3a44 321 PANTHER PTHR11938 98 200 1.1E-57 T 22-04-2016 SCD_RS03785 861c84c2644ea6784656e89fcecf3a44 321 PANTHER PTHR11938 33 72 1.1E-57 T 22-04-2016 SCD_RS03785 861c84c2644ea6784656e89fcecf3a44 321 PANTHER PTHR11938:SF68 98 200 1.1E-57 T 22-04-2016 SCD_RS03785 861c84c2644ea6784656e89fcecf3a44 321 PANTHER PTHR11938:SF68 33 72 1.1E-57 T 22-04-2016 SCD_RS03785 861c84c2644ea6784656e89fcecf3a44 321 Gene3D G3DSA:3.30.70.20 185 222 2.7E-26 T 22-04-2016 SCD_RS03785 861c84c2644ea6784656e89fcecf3a44 321 Gene3D G3DSA:3.30.70.20 36 109 2.7E-26 T 22-04-2016 SCD_RS03785 861c84c2644ea6784656e89fcecf3a44 321 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 25 1.9E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SCD_RS03785 861c84c2644ea6784656e89fcecf3a44 321 Gene3D G3DSA:3.30.70.20 151 184 1.2E-7 T 22-04-2016 SCD_RS10005 de0fef896d91cac309db8938ea15b160 313 PANTHER PTHR11432:SF1 4 307 1.6E-88 T 22-04-2016 SCD_RS10005 de0fef896d91cac309db8938ea15b160 313 PANTHER PTHR11432 4 307 1.6E-88 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 SCD_RS10005 de0fef896d91cac309db8938ea15b160 313 Pfam PF00146 NADH dehydrogenase 13 307 4.4E-34 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 SCD_RS06130 1668b5941be0e5994d2b88480e4562b5 242 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 217 229 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SCD_RS06130 1668b5941be0e5994d2b88480e4562b5 242 PANTHER PTHR30587:SF0 2 242 1.9E-121 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SCD_RS06130 1668b5941be0e5994d2b88480e4562b5 242 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 44 240 3.8E-91 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SCD_RS06130 1668b5941be0e5994d2b88480e4562b5 242 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 169 189 1.6E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SCD_RS06130 1668b5941be0e5994d2b88480e4562b5 242 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 190 211 1.6E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SCD_RS06130 1668b5941be0e5994d2b88480e4562b5 242 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 214 239 1.6E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SCD_RS06130 1668b5941be0e5994d2b88480e4562b5 242 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 61 81 1.6E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SCD_RS06130 1668b5941be0e5994d2b88480e4562b5 242 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 81 100 1.6E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SCD_RS06130 1668b5941be0e5994d2b88480e4562b5 242 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 42 61 1.6E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SCD_RS06130 1668b5941be0e5994d2b88480e4562b5 242 Pfam PF00813 FliP family 44 236 1.8E-80 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SCD_RS06130 1668b5941be0e5994d2b88480e4562b5 242 PANTHER PTHR30587 2 242 1.9E-121 T 22-04-2016 SCD_RS06130 1668b5941be0e5994d2b88480e4562b5 242 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 169 184 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SCD_RS06130 1668b5941be0e5994d2b88480e4562b5 242 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 40 49 4.5E-32 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SCD_RS06130 1668b5941be0e5994d2b88480e4562b5 242 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 100 112 4.5E-32 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SCD_RS06130 1668b5941be0e5994d2b88480e4562b5 242 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 112 126 4.5E-32 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SCD_RS06130 1668b5941be0e5994d2b88480e4562b5 242 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 140 152 4.5E-32 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SCD_RS06130 1668b5941be0e5994d2b88480e4562b5 242 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 230 240 4.5E-32 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SCD_RS06130 1668b5941be0e5994d2b88480e4562b5 242 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 162 174 4.5E-32 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SCD_RS07635 e5fa74a59ecfd5ceeab85a7990733549 239 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 31 211 1.1E-6 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SCD_RS07635 e5fa74a59ecfd5ceeab85a7990733549 239 PANTHER PTHR21091:SF18 3 185 3.4E-23 T 22-04-2016 SCD_RS07635 e5fa74a59ecfd5ceeab85a7990733549 239 PIRSF PIRSF005917 1 239 1.5E-55 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SCD_RS07635 e5fa74a59ecfd5ceeab85a7990733549 239 Gene3D G3DSA:3.30.950.10 121 237 1.2E-29 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 SCD_RS07635 e5fa74a59ecfd5ceeab85a7990733549 239 PANTHER PTHR21091 3 185 3.4E-23 T 22-04-2016 SCD_RS07635 e5fa74a59ecfd5ceeab85a7990733549 239 SUPERFAMILY SSF53790 4 234 4.32E-72 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SCD_RS07285 628d7bfe0485cda5c729273b57351f37 270 SUPERFAMILY SSF54534 124 221 4.12E-27 T 22-04-2016 SCD_RS07285 628d7bfe0485cda5c729273b57351f37 270 Pfam PF13616 PPIC-type PPIASE domain 131 222 4.3E-22 T 22-04-2016 SCD_RS07285 628d7bfe0485cda5c729273b57351f37 270 PANTHER PTHR10657 27 269 7.7E-37 T 22-04-2016 SCD_RS07285 628d7bfe0485cda5c729273b57351f37 270 SUPERFAMILY SSF109998 27 161 1.69E-19 T 22-04-2016 IPR027304 Trigger factor/SurA domain SCD_RS07285 628d7bfe0485cda5c729273b57351f37 270 PANTHER PTHR10657:SF11 27 269 7.7E-37 T 22-04-2016 SCD_RS07285 628d7bfe0485cda5c729273b57351f37 270 Gene3D G3DSA:3.10.50.40 129 245 4.5E-40 T 22-04-2016 SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 398 521 3.8E-23 T 22-04-2016 IPR000014 PAS domain SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 274 399 7.9E-11 T 22-04-2016 IPR000014 PAS domain SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 SUPERFAMILY SSF55785 411 523 4.03E-30 T 22-04-2016 IPR000014 PAS domain SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 Pfam PF00990 Diguanylate cyclase, GGDEF domain 525 686 9.3E-50 T 22-04-2016 IPR000160 GGDEF domain SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 SUPERFAMILY SSF141868 707 952 7.72E-91 T 22-04-2016 IPR001633 EAL domain SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 Pfam PF13426 PAS domain 411 513 4.0E-18 T 22-04-2016 IPR000014 PAS domain SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 SMART SM00091 400 466 7.1E-7 T 22-04-2016 IPR000014 PAS domain SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 SMART SM00091 278 346 140.0 T 22-04-2016 IPR000014 PAS domain SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 SUPERFAMILY SSF55785 269 391 7.68E-13 T 22-04-2016 IPR000014 PAS domain SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 SUPERFAMILY SSF55073 530 693 3.06E-51 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 SMART SM00086 472 514 5.2E-4 T 22-04-2016 IPR001610 PAC motif SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 SMART SM00086 353 393 210.0 T 22-04-2016 IPR001610 PAC motif SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 PANTHER PTHR10799 558 800 1.2E-84 T 22-04-2016 SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 PANTHER PTHR10799 94 241 1.2E-84 T 22-04-2016 SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 SMART SM00267 514 691 1.3E-62 T 22-04-2016 IPR000160 GGDEF domain SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 Pfam PF03707 Bacterial signalling protein N terminal repeat 114 163 2.0E-14 T 22-04-2016 IPR005330 MHYT domain SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 Pfam PF03707 Bacterial signalling protein N terminal repeat 51 104 1.5E-17 T 22-04-2016 IPR005330 MHYT domain SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 Gene3D G3DSA:3.30.450.20 269 393 2.0E-12 T 22-04-2016 SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 SMART SM00052 701 947 5.6E-116 T 22-04-2016 IPR001633 EAL domain SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 Gene3D G3DSA:3.30.70.270 527 697 8.0E-60 T 22-04-2016 SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 PANTHER PTHR10799:SF774 558 800 1.2E-84 T 22-04-2016 SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 PANTHER PTHR10799:SF774 94 241 1.2E-84 T 22-04-2016 SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 523 690 7.7E-43 T 22-04-2016 IPR000160 GGDEF domain SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 Gene3D G3DSA:3.30.450.20 409 513 2.3E-29 T 22-04-2016 SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 Pfam PF08448 PAS fold 284 394 1.7E-10 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 Pfam PF00563 EAL domain 707 942 2.6E-72 T 22-04-2016 IPR001633 EAL domain SCD_RS02135 6e01f4f4dfb2ebcf89bfe813ac29125b 953 Gene3D G3DSA:3.20.20.450 705 952 1.9E-99 T 22-04-2016 IPR001633 EAL domain SCD_RS05230 4bf1cab3f12f35702641eb0f61dbbe00 358 Pfam PF00005 ABC transporter 18 162 5.5E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS05230 4bf1cab3f12f35702641eb0f61dbbe00 358 SUPERFAMILY SSF52540 10 224 1.9E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05230 4bf1cab3f12f35702641eb0f61dbbe00 358 PANTHER PTHR24220 258 291 6.0E-101 T 22-04-2016 SCD_RS05230 4bf1cab3f12f35702641eb0f61dbbe00 358 PANTHER PTHR24220 2 227 6.0E-101 T 22-04-2016 SCD_RS05230 4bf1cab3f12f35702641eb0f61dbbe00 358 SMART SM00382 25 212 6.3E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS05230 4bf1cab3f12f35702641eb0f61dbbe00 358 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 4 356 2.1E-143 T 22-04-2016 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 SCD_RS05230 4bf1cab3f12f35702641eb0f61dbbe00 358 Gene3D G3DSA:3.40.50.300 18 225 8.1E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05230 4bf1cab3f12f35702641eb0f61dbbe00 358 PANTHER PTHR24220:SF284 258 291 6.0E-101 T 22-04-2016 SCD_RS05230 4bf1cab3f12f35702641eb0f61dbbe00 358 PANTHER PTHR24220:SF284 2 227 6.0E-101 T 22-04-2016 SCD_RS05230 4bf1cab3f12f35702641eb0f61dbbe00 358 Gene3D G3DSA:2.40.50.100 282 354 3.3E-18 T 22-04-2016 SCD_RS05230 4bf1cab3f12f35702641eb0f61dbbe00 358 Pfam PF03459 TOBE domain 295 356 7.8E-16 T 22-04-2016 IPR005116 Transport-associated OB, type 1 SCD_RS05230 4bf1cab3f12f35702641eb0f61dbbe00 358 SUPERFAMILY SSF50331 244 356 2.34E-18 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SCD_RS05230 4bf1cab3f12f35702641eb0f61dbbe00 358 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 9 71 1.6E-10 T 22-04-2016 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 SUPERFAMILY SSF55008 74 139 1.96E-17 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 Pfam PF00702 haloacid dehalogenase-like hydrolase 483 698 6.4E-41 T 22-04-2016 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 PRINTS PR00943 Copper-transporting ATPase signature 118 138 7.1E-13 T 22-04-2016 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 PRINTS PR00943 Copper-transporting ATPase signature 661 678 7.1E-13 T 22-04-2016 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 PRINTS PR00943 Copper-transporting ATPase signature 410 424 7.1E-13 T 22-04-2016 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 PRINTS PR00943 Copper-transporting ATPase signature 210 229 7.1E-13 T 22-04-2016 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 PRINTS PR00943 Copper-transporting ATPase signature 277 295 7.1E-13 T 22-04-2016 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 PRINTS PR00943 Copper-transporting ATPase signature 718 732 7.1E-13 T 22-04-2016 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 PRINTS PR00943 Copper-transporting ATPase signature 470 485 7.1E-13 T 22-04-2016 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 SUPERFAMILY SSF81665 388 481 4.71E-17 T 22-04-2016 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 SUPERFAMILY SSF81665 733 761 4.71E-17 T 22-04-2016 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 SUPERFAMILY SSF81665 236 291 4.71E-17 T 22-04-2016 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 Gene3D G3DSA:2.70.150.10 224 388 5.3E-30 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 225 786 2.1E-183 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 Pfam PF00122 E1-E2 ATPase 259 478 3.4E-66 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 487 501 1.7E-26 T 22-04-2016 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 684 703 1.7E-26 T 22-04-2016 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 337 351 1.7E-26 T 22-04-2016 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 707 719 1.7E-26 T 22-04-2016 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 631 641 1.7E-26 T 22-04-2016 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 609 620 1.7E-26 T 22-04-2016 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 Gene3D G3DSA:3.40.1110.10 502 611 2.0E-20 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 ProSitePatterns PS01047 Heavy-metal-associated domain. 13 41 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 ProSitePatterns PS01047 Heavy-metal-associated domain. 80 108 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 Gene3D G3DSA:3.40.50.1000 458 501 7.4E-55 T 22-04-2016 IPR023214 HAD-like domain SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 Gene3D G3DSA:3.40.50.1000 612 753 7.4E-55 T 22-04-2016 IPR023214 HAD-like domain SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 SUPERFAMILY SSF81653 289 387 6.93E-25 T 22-04-2016 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 489 495 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 PANTHER PTHR24093 7 790 9.6E-275 T 22-04-2016 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 Gene3D G3DSA:3.30.70.100 74 138 1.2E-20 T 22-04-2016 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 Gene3D G3DSA:3.30.70.100 3 71 1.2E-22 T 22-04-2016 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 Pfam PF00403 Heavy-metal-associated domain 78 136 1.2E-12 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 Pfam PF00403 Heavy-metal-associated domain 12 69 4.6E-13 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 SUPERFAMILY SSF56784 485 505 2.69E-58 T 22-04-2016 IPR023214 HAD-like domain SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 SUPERFAMILY SSF56784 544 784 2.69E-58 T 22-04-2016 IPR023214 HAD-like domain SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 PANTHER PTHR24093:SF332 7 790 9.6E-275 T 22-04-2016 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 260 767 2.8E-92 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 206 787 2.8E-175 T 22-04-2016 SCD_RS09055 fef08877dbbb532dfe1373ec64ce23a4 793 SUPERFAMILY SSF55008 4 71 5.24E-18 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SCD_RS03245 6cd9780edae7352fb5252467d8503bd8 459 PANTHER PTHR23510:SF6 10 403 1.1E-117 T 22-04-2016 SCD_RS03245 6cd9780edae7352fb5252467d8503bd8 459 Pfam PF07690 Major Facilitator Superfamily 21 357 4.1E-44 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SCD_RS03245 6cd9780edae7352fb5252467d8503bd8 459 SUPERFAMILY SSF103473 13 396 9.02E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain SCD_RS03245 6cd9780edae7352fb5252467d8503bd8 459 Gene3D G3DSA:1.20.1250.20 217 396 4.7E-22 T 22-04-2016 SCD_RS03245 6cd9780edae7352fb5252467d8503bd8 459 Gene3D G3DSA:1.20.1250.20 18 193 6.2E-31 T 22-04-2016 SCD_RS03245 6cd9780edae7352fb5252467d8503bd8 459 PANTHER PTHR23510 10 403 1.1E-117 T 22-04-2016 SCD_RS10500 7bbf3de8722af29c661e238baed3ce4a 340 Gene3D G3DSA:3.50.50.60 284 338 6.0E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS10500 7bbf3de8722af29c661e238baed3ce4a 340 Gene3D G3DSA:3.50.50.60 1 77 6.0E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS10500 7bbf3de8722af29c661e238baed3ce4a 340 Gene3D G3DSA:3.50.50.60 115 196 6.0E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS10500 7bbf3de8722af29c661e238baed3ce4a 340 SUPERFAMILY SSF54373 197 282 8.24E-20 T 22-04-2016 SCD_RS10500 7bbf3de8722af29c661e238baed3ce4a 340 Pfam PF01266 FAD dependent oxidoreductase 1 322 3.4E-59 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SCD_RS10500 7bbf3de8722af29c661e238baed3ce4a 340 PANTHER PTHR13847 1 336 8.2E-74 T 22-04-2016 SCD_RS10500 7bbf3de8722af29c661e238baed3ce4a 340 PANTHER PTHR13847:SF180 1 336 8.2E-74 T 22-04-2016 SCD_RS10500 7bbf3de8722af29c661e238baed3ce4a 340 SUPERFAMILY SSF51905 1 197 7.12E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS10500 7bbf3de8722af29c661e238baed3ce4a 340 SUPERFAMILY SSF51905 284 336 7.12E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS05780 34218d9899788b30f92c021d6e9bb6b0 246 Pfam PF08241 Methyltransferase domain 70 119 3.8E-7 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SCD_RS05780 34218d9899788b30f92c021d6e9bb6b0 246 PANTHER PTHR10108:SF836 78 166 6.9E-26 T 22-04-2016 SCD_RS05780 34218d9899788b30f92c021d6e9bb6b0 246 PANTHER PTHR10108 78 166 6.9E-26 T 22-04-2016 SCD_RS05780 34218d9899788b30f92c021d6e9bb6b0 246 Gene3D G3DSA:3.40.50.150 77 210 5.6E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS05780 34218d9899788b30f92c021d6e9bb6b0 246 SUPERFAMILY SSF53335 65 209 1.05E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS01865 92d22529df466aa3eea9db2d7fda10aa 503 Gene3D G3DSA:1.10.760.10 28 101 4.1E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01865 92d22529df466aa3eea9db2d7fda10aa 503 Pfam PF02239 Cytochrome D1 heme domain 137 494 1.6E-118 T 22-04-2016 SCD_RS01865 92d22529df466aa3eea9db2d7fda10aa 503 Gene3D G3DSA:2.140.10.20 243 490 3.9E-67 T 22-04-2016 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain SCD_RS01865 92d22529df466aa3eea9db2d7fda10aa 503 SUPERFAMILY SSF51004 109 496 3.14E-90 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain SCD_RS01865 92d22529df466aa3eea9db2d7fda10aa 503 Gene3D G3DSA:2.130.10.10 176 242 1.4E-12 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SCD_RS01865 92d22529df466aa3eea9db2d7fda10aa 503 SUPERFAMILY SSF46626 11 102 5.53E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01865 92d22529df466aa3eea9db2d7fda10aa 503 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 28 100 6.2E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS09615 3eff646bfc0a61e57e29beb6edfa2c28 307 SUPERFAMILY SSF52768 2 306 8.63E-108 T 22-04-2016 SCD_RS09615 3eff646bfc0a61e57e29beb6edfa2c28 307 PANTHER PTHR10625 3 306 1.4E-104 T 22-04-2016 IPR000286 Histone deacetylase superfamily SCD_RS09615 3eff646bfc0a61e57e29beb6edfa2c28 307 Pfam PF00850 Histone deacetylase domain 20 304 4.5E-83 T 22-04-2016 IPR023801 Histone deacetylase domain SCD_RS09615 3eff646bfc0a61e57e29beb6edfa2c28 307 Gene3D G3DSA:3.40.800.20 3 305 1.1E-107 T 22-04-2016 IPR023801 Histone deacetylase domain SCD_RS09615 3eff646bfc0a61e57e29beb6edfa2c28 307 PRINTS PR01270 Histone deacetylase superfamily signature 234 244 4.0E-16 T 22-04-2016 IPR000286 Histone deacetylase superfamily SCD_RS09615 3eff646bfc0a61e57e29beb6edfa2c28 307 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 4.0E-16 T 22-04-2016 IPR000286 Histone deacetylase superfamily SCD_RS09615 3eff646bfc0a61e57e29beb6edfa2c28 307 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 4.0E-16 T 22-04-2016 IPR000286 Histone deacetylase superfamily SCD_RS13105 4bf4b494e797d692f1c20b0049e1d7e3 245 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.7E-9 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SCD_RS13105 4bf4b494e797d692f1c20b0049e1d7e3 245 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.7E-9 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SCD_RS13105 4bf4b494e797d692f1c20b0049e1d7e3 245 Gene3D G3DSA:2.60.120.10 21 170 4.4E-23 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SCD_RS13105 4bf4b494e797d692f1c20b0049e1d7e3 245 SUPERFAMILY SSF51206 38 162 1.96E-27 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like SCD_RS13105 4bf4b494e797d692f1c20b0049e1d7e3 245 SMART SM00100 28 151 1.9E-8 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SCD_RS13105 4bf4b494e797d692f1c20b0049e1d7e3 245 Pfam PF00027 Cyclic nucleotide-binding domain 50 131 5.3E-14 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SCD_RS13105 4bf4b494e797d692f1c20b0049e1d7e3 245 SUPERFAMILY SSF46785 166 243 5.18E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS13105 4bf4b494e797d692f1c20b0049e1d7e3 245 Gene3D G3DSA:1.10.10.10 171 243 2.5E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS13105 4bf4b494e797d692f1c20b0049e1d7e3 245 SMART SM00419 187 235 3.7E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SCD_RS13105 4bf4b494e797d692f1c20b0049e1d7e3 245 PANTHER PTHR24567:SF28 20 243 1.7E-75 T 22-04-2016 SCD_RS13105 4bf4b494e797d692f1c20b0049e1d7e3 245 PANTHER PTHR24567 20 243 1.7E-75 T 22-04-2016 SCD_RS13105 4bf4b494e797d692f1c20b0049e1d7e3 245 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 9.2E-18 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SCD_RS14145 c685e1157b1a71d8cc5dbe4097f8e065 644 Pfam PF00593 TonB dependent receptor 403 642 1.4E-29 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SCD_RS14145 c685e1157b1a71d8cc5dbe4097f8e065 644 Gene3D G3DSA:2.40.170.20 155 643 7.2E-82 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SCD_RS14145 c685e1157b1a71d8cc5dbe4097f8e065 644 SUPERFAMILY SSF56935 27 643 4.16E-110 T 22-04-2016 SCD_RS14145 c685e1157b1a71d8cc5dbe4097f8e065 644 PANTHER PTHR32552 1 643 5.9E-90 T 22-04-2016 SCD_RS14145 c685e1157b1a71d8cc5dbe4097f8e065 644 Gene3D G3DSA:2.170.130.10 27 154 3.4E-34 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SCD_RS14145 c685e1157b1a71d8cc5dbe4097f8e065 644 PANTHER PTHR32552:SF0 1 643 5.9E-90 T 22-04-2016 SCD_RS14145 c685e1157b1a71d8cc5dbe4097f8e065 644 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 152 7.2E-22 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SCD_RS15560 989f4d3630dd4c1ce647fb0fcd1cefbe 994 Pfam PF00563 EAL domain 750 986 2.1E-54 T 22-04-2016 IPR001633 EAL domain SCD_RS15560 989f4d3630dd4c1ce647fb0fcd1cefbe 994 SUPERFAMILY SSF141868 750 991 1.57E-65 T 22-04-2016 IPR001633 EAL domain SCD_RS15560 989f4d3630dd4c1ce647fb0fcd1cefbe 994 Pfam PF07793 Protein of unknown function (DUF1631) 2 441 2.1E-60 T 22-04-2016 IPR012434 Protein of unknown function DUF1631 SCD_RS15560 989f4d3630dd4c1ce647fb0fcd1cefbe 994 Pfam PF07793 Protein of unknown function (DUF1631) 429 561 1.6E-20 T 22-04-2016 IPR012434 Protein of unknown function DUF1631 SCD_RS15560 989f4d3630dd4c1ce647fb0fcd1cefbe 994 Gene3D G3DSA:3.20.20.450 746 992 1.4E-67 T 22-04-2016 IPR001633 EAL domain SCD_RS15560 989f4d3630dd4c1ce647fb0fcd1cefbe 994 Gene3D G3DSA:3.30.70.270 571 734 3.9E-40 T 22-04-2016 SCD_RS15560 989f4d3630dd4c1ce647fb0fcd1cefbe 994 Pfam PF00990 Diguanylate cyclase, GGDEF domain 571 726 2.4E-32 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15560 989f4d3630dd4c1ce647fb0fcd1cefbe 994 PANTHER PTHR33121 745 990 3.3E-60 T 22-04-2016 SCD_RS15560 989f4d3630dd4c1ce647fb0fcd1cefbe 994 SMART SM00052 743 991 8.0E-59 T 22-04-2016 IPR001633 EAL domain SCD_RS15560 989f4d3630dd4c1ce647fb0fcd1cefbe 994 SUPERFAMILY SSF55073 575 733 2.35E-36 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS15560 989f4d3630dd4c1ce647fb0fcd1cefbe 994 SMART SM00267 559 731 2.2E-39 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15560 989f4d3630dd4c1ce647fb0fcd1cefbe 994 PANTHER PTHR33121:SF10 745 990 3.3E-60 T 22-04-2016 SCD_RS15560 989f4d3630dd4c1ce647fb0fcd1cefbe 994 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 568 730 4.1E-31 T 22-04-2016 IPR000160 GGDEF domain SCD_RS01760 25db502c522407c42d73085899a677c4 289 SUPERFAMILY SSF52540 2 216 7.36E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS01760 25db502c522407c42d73085899a677c4 289 Pfam PF00005 ABC transporter 17 156 6.7E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS01760 25db502c522407c42d73085899a677c4 289 Gene3D G3DSA:3.40.50.300 1 211 2.4E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS01760 25db502c522407c42d73085899a677c4 289 PANTHER PTHR24220 3 213 1.3E-56 T 22-04-2016 SCD_RS01760 25db502c522407c42d73085899a677c4 289 SMART SM00382 26 204 2.5E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS01760 25db502c522407c42d73085899a677c4 289 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS00830 6754e7c5910a8db20f5f31ff17b3b749 118 PIRSF PIRSF029826 1 115 9.2E-44 T 22-04-2016 IPR011394 NTP Pyrophosphohydrolase MazG-related, RS21-C6 SCD_RS00830 6754e7c5910a8db20f5f31ff17b3b749 118 Pfam PF12643 MazG-like family 35 114 2.8E-12 T 22-04-2016 IPR025984 MazG-like domain KEGG: 00240+3.6.1.12 SCD_RS00830 6754e7c5910a8db20f5f31ff17b3b749 118 SUPERFAMILY SSF101386 3 114 2.47E-38 T 22-04-2016 SCD_RS00830 6754e7c5910a8db20f5f31ff17b3b749 118 PANTHER PTHR14552 3 114 1.2E-36 T 22-04-2016 SCD_RS00830 6754e7c5910a8db20f5f31ff17b3b749 118 Gene3D G3DSA:1.10.287.1080 3 93 6.1E-25 T 22-04-2016 SCD_RS09540 aba90e4424a131443b150d74979a29d9 281 Gene3D G3DSA:1.10.3150.10 15 274 1.3E-55 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS09540 aba90e4424a131443b150d74979a29d9 281 PANTHER PTHR33525:SF3 16 275 8.3E-34 T 22-04-2016 SCD_RS09540 aba90e4424a131443b150d74979a29d9 281 PANTHER PTHR33525 16 275 8.3E-34 T 22-04-2016 SCD_RS09540 aba90e4424a131443b150d74979a29d9 281 Pfam PF08668 HDOD domain 16 211 5.2E-40 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS09540 aba90e4424a131443b150d74979a29d9 281 SUPERFAMILY SSF109604 13 274 3.35E-52 T 22-04-2016 SCD_RS02375 297013d361bc35033ccb1d0d103c59a1 88 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 9.7E-35 T 22-04-2016 IPR019886 Sodium symporter small subunit, predicted SCD_RS02375 297013d361bc35033ccb1d0d103c59a1 88 Pfam PF13937 Domain of unknown function (DUF4212) 10 86 1.3E-33 T 22-04-2016 IPR019886 Sodium symporter small subunit, predicted SCD_RS07850 d24ad229190d6ea3c28d23d4b0328ff1 152 Gene3D G3DSA:3.40.30.10 4 151 1.5E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS07850 d24ad229190d6ea3c28d23d4b0328ff1 152 Pfam PF00578 AhpC/TSA family 5 129 9.3E-37 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SCD_RS07850 d24ad229190d6ea3c28d23d4b0328ff1 152 PANTHER PTHR10681 8 151 3.5E-45 T 22-04-2016 SCD_RS07850 d24ad229190d6ea3c28d23d4b0328ff1 152 SUPERFAMILY SSF52833 3 151 4.75E-48 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS07850 d24ad229190d6ea3c28d23d4b0328ff1 152 PIRSF PIRSF000239 1 152 4.5E-25 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 SCD_RS07545 ac8f3516bd2c8aef68392ed3cabc387a 254 PANTHER PTHR10060:SF20 1 254 1.1E-119 T 22-04-2016 SCD_RS07545 ac8f3516bd2c8aef68392ed3cabc387a 254 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SCD_RS07545 ac8f3516bd2c8aef68392ed3cabc387a 254 Gene3D G3DSA:3.20.20.140 1 253 7.2E-90 T 22-04-2016 SCD_RS07545 ac8f3516bd2c8aef68392ed3cabc387a 254 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 252 2.6E-87 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 SCD_RS07545 ac8f3516bd2c8aef68392ed3cabc387a 254 SUPERFAMILY SSF51556 1 252 4.81E-89 T 22-04-2016 IPR032466 Metal-dependent hydrolase SCD_RS07545 ac8f3516bd2c8aef68392ed3cabc387a 254 PANTHER PTHR10060 1 254 1.1E-119 T 22-04-2016 IPR001130 TatD family GO:0016788 SCD_RS07545 ac8f3516bd2c8aef68392ed3cabc387a 254 Pfam PF01026 TatD related DNase 3 252 8.8E-81 T 22-04-2016 IPR001130 TatD family GO:0016788 SCD_RS07545 ac8f3516bd2c8aef68392ed3cabc387a 254 PIRSF PIRSF005902 1 254 1.1E-80 T 22-04-2016 IPR001130 TatD family GO:0016788 SCD_RS13230 607cbf8c88dc3350ec37132db00f44eb 312 SUPERFAMILY SSF53067 53 163 2.46E-8 T 22-04-2016 SCD_RS12140 61f0bbf6f2933ca09e8aa3d6b69d9b75 298 PANTHER PTHR30349 6 297 3.3E-111 T 22-04-2016 SCD_RS12140 61f0bbf6f2933ca09e8aa3d6b69d9b75 298 SUPERFAMILY SSF56349 110 296 4.41E-56 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SCD_RS12140 61f0bbf6f2933ca09e8aa3d6b69d9b75 298 Pfam PF00589 Phage integrase family 113 283 7.9E-52 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SCD_RS12140 61f0bbf6f2933ca09e8aa3d6b69d9b75 298 SUPERFAMILY SSF47823 4 101 7.85E-27 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal SCD_RS12140 61f0bbf6f2933ca09e8aa3d6b69d9b75 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 7 91 4.1E-16 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SCD_RS12140 61f0bbf6f2933ca09e8aa3d6b69d9b75 298 Gene3D G3DSA:1.10.443.10 113 289 3.1E-56 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SCD_RS12140 61f0bbf6f2933ca09e8aa3d6b69d9b75 298 Gene3D G3DSA:1.10.150.130 5 100 3.1E-23 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SCD_RS12140 61f0bbf6f2933ca09e8aa3d6b69d9b75 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 298 30.99 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD SCD_RS12140 61f0bbf6f2933ca09e8aa3d6b69d9b75 298 PANTHER PTHR30349:SF5 6 297 3.3E-111 T 22-04-2016 SCD_RS12140 61f0bbf6f2933ca09e8aa3d6b69d9b75 298 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 9 297 1.6E-115 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 SCD_RS12140 61f0bbf6f2933ca09e8aa3d6b69d9b75 298 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 3 298 58.79 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 SCD_RS07940 1cbc1881a0da94021c3c7c4b73d16c0f 559 Pfam PF03109 ABC1 family 119 237 1.0E-33 T 22-04-2016 IPR004147 UbiB domain SCD_RS07940 1cbc1881a0da94021c3c7c4b73d16c0f 559 Gene3D G3DSA:3.90.1200.10 8 109 4.3E-5 T 22-04-2016 SCD_RS07940 1cbc1881a0da94021c3c7c4b73d16c0f 559 PANTHER PTHR10566 13 547 2.7E-144 T 22-04-2016 SCD_RS07940 1cbc1881a0da94021c3c7c4b73d16c0f 559 SUPERFAMILY SSF56112 199 348 1.53E-25 T 22-04-2016 IPR011009 Protein kinase-like domain SCD_RS07940 1cbc1881a0da94021c3c7c4b73d16c0f 559 SUPERFAMILY SSF56112 101 164 1.53E-25 T 22-04-2016 IPR011009 Protein kinase-like domain SCD_RS07940 1cbc1881a0da94021c3c7c4b73d16c0f 559 SUPERFAMILY SSF56112 387 436 1.53E-25 T 22-04-2016 IPR011009 Protein kinase-like domain SCD_RS07940 1cbc1881a0da94021c3c7c4b73d16c0f 559 Gene3D G3DSA:3.90.1200.10 282 358 1.7E-7 T 22-04-2016 SCD_RS07940 1cbc1881a0da94021c3c7c4b73d16c0f 559 PANTHER PTHR10566:SF10 13 547 2.7E-144 T 22-04-2016 SCD_RS09360 617a688d407d780a6a31f879318ad4e0 59 SUPERFAMILY SSF158997 1 54 8.76E-23 T 22-04-2016 SCD_RS09360 617a688d407d780a6a31f879318ad4e0 59 PANTHER PTHR33505 1 58 2.1E-25 T 22-04-2016 SCD_RS09360 617a688d407d780a6a31f879318ad4e0 59 Gene3D G3DSA:2.20.25.10 8 58 2.6E-27 T 22-04-2016 SCD_RS09360 617a688d407d780a6a31f879318ad4e0 59 Pfam PF03966 Trm112p-like protein 2 40 2.1E-12 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 SCD_RS09360 617a688d407d780a6a31f879318ad4e0 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 28.488 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 SCD_RS00675 7ae763f9acd689d1ea28a0f7630d9409 298 Gene3D G3DSA:3.40.50.300 39 205 2.2E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00675 7ae763f9acd689d1ea28a0f7630d9409 298 SUPERFAMILY SSF52540 38 284 7.91E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00675 7ae763f9acd689d1ea28a0f7630d9409 298 Pfam PF05621 Bacterial TniB protein 23 276 4.2E-97 T 22-04-2016 IPR008868 Bacterial TniB SCD_RS00240 cb7f739f597ee4f7e44d93a8404f47dc 315 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 302 1.2E-123 T 22-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SCD_RS00240 cb7f739f597ee4f7e44d93a8404f47dc 315 Hamap MF_00301 Homoserine kinase [thrB]. 1 315 152.481 T 22-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SCD_RS00240 cb7f739f597ee4f7e44d93a8404f47dc 315 Pfam PF01636 Phosphotransferase enzyme family 28 252 1.2E-36 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase SCD_RS00240 cb7f739f597ee4f7e44d93a8404f47dc 315 PANTHER PTHR21064 10 280 2.3E-40 T 22-04-2016 SCD_RS00240 cb7f739f597ee4f7e44d93a8404f47dc 315 SUPERFAMILY SSF56112 5 305 7.58E-81 T 22-04-2016 IPR011009 Protein kinase-like domain SCD_RS00240 cb7f739f597ee4f7e44d93a8404f47dc 315 Gene3D G3DSA:3.90.1200.10 105 307 1.2E-67 T 22-04-2016 SCD_RS00240 cb7f739f597ee4f7e44d93a8404f47dc 315 Gene3D G3DSA:3.30.200.20 1 103 3.1E-40 T 22-04-2016 SCD_RS01540 b78acde26a9dd06f69dfaff1ef7a6bc6 276 PANTHER PTHR31689:SF0 1 276 3.4E-124 T 22-04-2016 SCD_RS01540 b78acde26a9dd06f69dfaff1ef7a6bc6 276 Pfam PF01678 Diaminopimelate epimerase 155 268 3.2E-29 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SCD_RS01540 b78acde26a9dd06f69dfaff1ef7a6bc6 276 Pfam PF01678 Diaminopimelate epimerase 5 125 2.2E-30 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SCD_RS01540 b78acde26a9dd06f69dfaff1ef7a6bc6 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.07 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SCD_RS01540 b78acde26a9dd06f69dfaff1ef7a6bc6 276 SUPERFAMILY SSF54506 3 276 6.84E-52 T 22-04-2016 SCD_RS01540 b78acde26a9dd06f69dfaff1ef7a6bc6 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SCD_RS01540 b78acde26a9dd06f69dfaff1ef7a6bc6 276 Gene3D G3DSA:3.10.310.10 122 264 2.8E-49 T 22-04-2016 SCD_RS01540 b78acde26a9dd06f69dfaff1ef7a6bc6 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 2.0E-89 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SCD_RS01540 b78acde26a9dd06f69dfaff1ef7a6bc6 276 Gene3D G3DSA:3.10.310.10 3 121 4.5E-49 T 22-04-2016 SCD_RS01540 b78acde26a9dd06f69dfaff1ef7a6bc6 276 PANTHER PTHR31689 1 276 3.4E-124 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SCD_RS12435 813129ffafe179ef585e5ee2df4e2a41 439 Pfam PF01551 Peptidase family M23 301 397 3.3E-30 T 22-04-2016 IPR016047 Peptidase M23 SCD_RS12435 813129ffafe179ef585e5ee2df4e2a41 439 PANTHER PTHR21666:SF221 1 429 5.0E-56 T 22-04-2016 SCD_RS12435 813129ffafe179ef585e5ee2df4e2a41 439 Gene3D G3DSA:2.70.70.10 260 399 1.3E-42 T 22-04-2016 SCD_RS12435 813129ffafe179ef585e5ee2df4e2a41 439 PANTHER PTHR21666 1 429 5.0E-56 T 22-04-2016 SCD_RS12435 813129ffafe179ef585e5ee2df4e2a41 439 SUPERFAMILY SSF51261 164 398 1.26E-63 T 22-04-2016 IPR011055 Duplicated hybrid motif SCD_RS10450 42f4bebbe50092253eb511e41ee73598 197 Gene3D G3DSA:3.20.20.70 45 176 4.0E-12 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS10450 42f4bebbe50092253eb511e41ee73598 197 Pfam PF00571 CBS domain 48 91 1.7E-7 T 22-04-2016 IPR000644 CBS domain SCD_RS10450 42f4bebbe50092253eb511e41ee73598 197 SUPERFAMILY SSF54631 47 177 3.24E-13 T 22-04-2016 SCD_RS10235 86b19682f22a1616c7bca320aab84431 393 Gene3D G3DSA:3.40.50.150 180 390 1.5E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS10235 86b19682f22a1616c7bca320aab84431 393 PANTHER PTHR11061:SF12 4 390 3.0E-111 T 22-04-2016 SCD_RS10235 86b19682f22a1616c7bca320aab84431 393 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 112 347 1.0E-32 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 SCD_RS10235 86b19682f22a1616c7bca320aab84431 393 SUPERFAMILY SSF53335 81 388 2.79E-72 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS10235 86b19682f22a1616c7bca320aab84431 393 PANTHER PTHR11061 4 390 3.0E-111 T 22-04-2016 SCD_RS10235 86b19682f22a1616c7bca320aab84431 393 Gene3D G3DSA:2.30.130.10 1 71 1.9E-22 T 22-04-2016 IPR015947 PUA-like domain SCD_RS10235 86b19682f22a1616c7bca320aab84431 393 SMART SM00359 2 87 3.4E-15 T 22-04-2016 IPR002478 PUA domain GO:0003723 SCD_RS10235 86b19682f22a1616c7bca320aab84431 393 SUPERFAMILY SSF88697 1 71 5.63E-16 T 22-04-2016 IPR015947 PUA-like domain SCD_RS10235 86b19682f22a1616c7bca320aab84431 393 Gene3D G3DSA:3.30.750.80 73 176 1.7E-36 T 22-04-2016 SCD_RS07605 bb5793f7aa7943c161b0b8c07b3c7e6b 338 Gene3D G3DSA:3.40.718.10 3 332 8.7E-138 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SCD_RS07605 bb5793f7aa7943c161b0b8c07b3c7e6b 338 PANTHER PTHR30100 1 338 3.7E-136 T 22-04-2016 SCD_RS07605 bb5793f7aa7943c161b0b8c07b3c7e6b 338 Pfam PF02504 Fatty acid synthesis protein 4 324 5.5E-112 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 SCD_RS07605 bb5793f7aa7943c161b0b8c07b3c7e6b 338 PANTHER PTHR30100:SF1 1 338 3.7E-136 T 22-04-2016 SCD_RS07605 bb5793f7aa7943c161b0b8c07b3c7e6b 338 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 338 157.447 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SCD_RS07605 bb5793f7aa7943c161b0b8c07b3c7e6b 338 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 5 335 3.0E-114 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SCD_RS07605 bb5793f7aa7943c161b0b8c07b3c7e6b 338 SUPERFAMILY SSF53659 3 333 2.92E-109 T 22-04-2016 SCD_RS07605 bb5793f7aa7943c161b0b8c07b3c7e6b 338 PIRSF PIRSF002465 1 338 1.3E-133 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SCD_RS03725 ddc8be9f0cb82d8dfe3e158f72c6e5be 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 2.1E-73 T 22-04-2016 IPR001405 RadC protein SCD_RS03725 ddc8be9f0cb82d8dfe3e158f72c6e5be 224 Gene3D G3DSA:1.10.150.20 47 83 1.7E-4 T 22-04-2016 SCD_RS03725 ddc8be9f0cb82d8dfe3e158f72c6e5be 224 SUPERFAMILY SSF47781 18 89 3.5E-12 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SCD_RS03725 ddc8be9f0cb82d8dfe3e158f72c6e5be 224 Pfam PF04002 RadC-like JAB domain 104 223 2.0E-44 T 22-04-2016 IPR025657 RadC-like JAB domain SCD_RS03725 ddc8be9f0cb82d8dfe3e158f72c6e5be 224 PANTHER PTHR30471 1 224 1.2E-122 T 22-04-2016 SCD_RS03725 ddc8be9f0cb82d8dfe3e158f72c6e5be 224 PANTHER PTHR30471:SF5 1 224 1.2E-122 T 22-04-2016 SCD_RS03725 ddc8be9f0cb82d8dfe3e158f72c6e5be 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site SCD_RS03725 ddc8be9f0cb82d8dfe3e158f72c6e5be 224 Gene3D G3DSA:3.40.140.10 100 224 5.7E-50 T 22-04-2016 SCD_RS03725 ddc8be9f0cb82d8dfe3e158f72c6e5be 224 SUPERFAMILY SSF102712 117 202 2.09E-5 T 22-04-2016 SCD_RS01000 7de3a918065f889338e0f8c4273babd1 175 SUPERFAMILY SSF52833 64 138 1.62E-8 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS01000 7de3a918065f889338e0f8c4273babd1 175 Pfam PF13511 Domain of unknown function (DUF4124) 6 42 4.8E-11 T 22-04-2016 IPR025392 Domain of unknown function DUF4124 SCD_RS01000 7de3a918065f889338e0f8c4273babd1 175 Gene3D G3DSA:3.40.30.10 64 140 8.4E-9 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS01000 7de3a918065f889338e0f8c4273babd1 175 Pfam PF00462 Glutaredoxin 71 119 4.3E-6 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 SCD_RS02280 41bd617b826ecf4ded0bfa684df9fce3 146 PANTHER PTHR39966 1 138 3.9E-18 T 22-04-2016 SCD_RS02280 41bd617b826ecf4ded0bfa684df9fce3 146 Pfam PF01814 Hemerythrin HHE cation binding domain 6 125 4.5E-21 T 22-04-2016 IPR012312 Haemerythrin-like SCD_RS02280 41bd617b826ecf4ded0bfa684df9fce3 146 Gene3D G3DSA:1.20.120.520 13 132 8.6E-22 T 22-04-2016 SCD_RS13160 b5e5d0291b25e8a2247c4860172e0cff 388 SUPERFAMILY SSF46626 268 381 4.58E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS13160 b5e5d0291b25e8a2247c4860172e0cff 388 PRINTS PR01166 Cytochrome c oxidase subunit II signature 233 250 7.2E-29 T 22-04-2016 SCD_RS13160 b5e5d0291b25e8a2247c4860172e0cff 388 PRINTS PR01166 Cytochrome c oxidase subunit II signature 171 192 7.2E-29 T 22-04-2016 SCD_RS13160 b5e5d0291b25e8a2247c4860172e0cff 388 PRINTS PR01166 Cytochrome c oxidase subunit II signature 84 96 7.2E-29 T 22-04-2016 SCD_RS13160 b5e5d0291b25e8a2247c4860172e0cff 388 PRINTS PR01166 Cytochrome c oxidase subunit II signature 215 232 7.2E-29 T 22-04-2016 SCD_RS13160 b5e5d0291b25e8a2247c4860172e0cff 388 PRINTS PR01166 Cytochrome c oxidase subunit II signature 195 215 7.2E-29 T 22-04-2016 SCD_RS13160 b5e5d0291b25e8a2247c4860172e0cff 388 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 38 260 9.6E-54 T 22-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 SCD_RS13160 b5e5d0291b25e8a2247c4860172e0cff 388 PANTHER PTHR22888 1 291 5.5E-94 T 22-04-2016 SCD_RS13160 b5e5d0291b25e8a2247c4860172e0cff 388 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 128 251 2.6E-37 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 SCD_RS13160 b5e5d0291b25e8a2247c4860172e0cff 388 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 25 105 1.3E-10 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 SCD_RS13160 b5e5d0291b25e8a2247c4860172e0cff 388 PANTHER PTHR22888:SF2 1 291 5.5E-94 T 22-04-2016 SCD_RS13160 b5e5d0291b25e8a2247c4860172e0cff 388 SUPERFAMILY SSF81464 26 105 3.43E-15 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 SCD_RS13160 b5e5d0291b25e8a2247c4860172e0cff 388 SUPERFAMILY SSF49503 122 315 4.14E-52 T 22-04-2016 IPR008972 Cupredoxin SCD_RS13160 b5e5d0291b25e8a2247c4860172e0cff 388 Gene3D G3DSA:1.10.760.10 297 388 3.4E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS13160 b5e5d0291b25e8a2247c4860172e0cff 388 Gene3D G3DSA:2.60.40.420 117 296 4.9E-57 T 22-04-2016 IPR008972 Cupredoxin SCD_RS13160 b5e5d0291b25e8a2247c4860172e0cff 388 Gene3D G3DSA:1.10.287.90 26 105 7.6E-15 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 SCD_RS13160 b5e5d0291b25e8a2247c4860172e0cff 388 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 196 244 - T 22-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 SCD_RS13160 b5e5d0291b25e8a2247c4860172e0cff 388 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 283 366 3.7E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS07350 02e5cc112490c4a77bfb6a8b3891f7ed 289 TIGRFAM TIGR03370 VPLPA-CTERM: VPLPA-CTERM protein sorting domain 264 287 1.2E-8 T 22-04-2016 IPR022472 VPLPA-CTERM protein sorting domain SCD_RS12725 137a06b3e9430b022dd5a6b93c3d61d2 118 PANTHER PTHR34874 1 118 8.4E-26 T 22-04-2016 SCD_RS12725 137a06b3e9430b022dd5a6b93c3d61d2 118 Gene3D G3DSA:3.40.1260.10 1 118 4.3E-37 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS12725 137a06b3e9430b022dd5a6b93c3d61d2 118 Pfam PF02635 DsrE/DsrF-like family 1 118 5.9E-22 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein SCD_RS12725 137a06b3e9430b022dd5a6b93c3d61d2 118 SUPERFAMILY SSF75169 1 118 1.83E-28 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS03830 57ad6f29bf8880f5ebaa3bbbb8b498b5 85 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 39 55 4.31E-21 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SCD_RS03830 57ad6f29bf8880f5ebaa3bbbb8b498b5 85 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 18 34 4.31E-21 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SCD_RS03830 57ad6f29bf8880f5ebaa3bbbb8b498b5 85 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 57 69 4.31E-21 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SCD_RS03830 57ad6f29bf8880f5ebaa3bbbb8b498b5 85 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 4.31E-21 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SCD_RS03830 57ad6f29bf8880f5ebaa3bbbb8b498b5 85 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 70 3.6E-24 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SCD_RS03830 57ad6f29bf8880f5ebaa3bbbb8b498b5 85 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 22-04-2016 IPR019812 Hydrogenase assembly chaperone, conserved site SCD_RS03830 57ad6f29bf8880f5ebaa3bbbb8b498b5 85 PANTHER PTHR35177 1 71 1.2E-23 T 22-04-2016 SCD_RS03830 57ad6f29bf8880f5ebaa3bbbb8b498b5 85 SUPERFAMILY SSF159127 1 73 9.29E-25 T 22-04-2016 SCD_RS03830 57ad6f29bf8880f5ebaa3bbbb8b498b5 85 PANTHER PTHR35177:SF2 1 71 1.2E-23 T 22-04-2016 SCD_RS03830 57ad6f29bf8880f5ebaa3bbbb8b498b5 85 Pfam PF01455 HupF/HypC family 1 66 5.4E-27 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SCD_RS10755 84d012986d30315254be02610c13b4ed 158 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 21 152 8.8E-40 T 22-04-2016 IPR005247 YbhB/YbcL SCD_RS10755 84d012986d30315254be02610c13b4ed 158 SUPERFAMILY SSF49777 2 148 7.59E-47 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein SCD_RS10755 84d012986d30315254be02610c13b4ed 158 Pfam PF01161 Phosphatidylethanolamine-binding protein 15 154 8.5E-38 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein SCD_RS10755 84d012986d30315254be02610c13b4ed 158 Gene3D G3DSA:3.90.280.10 3 157 3.0E-52 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein SCD_RS10755 84d012986d30315254be02610c13b4ed 158 PANTHER PTHR30289 3 157 7.9E-54 T 22-04-2016 SCD_RS04045 e0e8af096fcc9afaf5beed1201ba0eb7 139 PANTHER PTHR36115:SF2 9 136 1.0E-23 T 22-04-2016 SCD_RS04045 e0e8af096fcc9afaf5beed1201ba0eb7 139 PANTHER PTHR36115 9 136 1.0E-23 T 22-04-2016 SCD_RS04045 e0e8af096fcc9afaf5beed1201ba0eb7 139 Pfam PF06271 RDD family 8 131 6.7E-23 T 22-04-2016 IPR010432 RDD SCD_RS00780 949520b6162d909854f52a4fed03b9ad 202 PANTHER PTHR12277 6 195 3.0E-43 T 22-04-2016 SCD_RS00780 949520b6162d909854f52a4fed03b9ad 202 SUPERFAMILY SSF53474 3 194 2.51E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SCD_RS00780 949520b6162d909854f52a4fed03b9ad 202 PANTHER PTHR12277:SF79 6 195 3.0E-43 T 22-04-2016 SCD_RS00780 949520b6162d909854f52a4fed03b9ad 202 Pfam PF12146 Serine aminopeptidase, S33 38 135 8.9E-13 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 SCD_RS00780 949520b6162d909854f52a4fed03b9ad 202 Gene3D G3DSA:3.40.50.1820 4 196 2.0E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SCD_RS09415 81fa2ae347d1bc3aefd1d75aa57f40a8 97 PANTHER PTHR37010 5 97 5.1E-17 T 22-04-2016 SCD_RS09415 81fa2ae347d1bc3aefd1d75aa57f40a8 97 Pfam PF04358 DsrC like protein 5 97 2.3E-21 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE SCD_RS09415 81fa2ae347d1bc3aefd1d75aa57f40a8 97 SUPERFAMILY SSF69721 5 97 1.7E-27 T 22-04-2016 IPR025526 DsrC-like domain SCD_RS09415 81fa2ae347d1bc3aefd1d75aa57f40a8 97 Gene3D G3DSA:1.10.10.370 34 97 6.1E-17 T 22-04-2016 SCD_RS09415 81fa2ae347d1bc3aefd1d75aa57f40a8 97 Gene3D G3DSA:3.30.1420.10 7 31 2.3E-5 T 22-04-2016 SCD_RS09415 81fa2ae347d1bc3aefd1d75aa57f40a8 97 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 5 97 1.8E-19 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE SCD_RS09415 81fa2ae347d1bc3aefd1d75aa57f40a8 97 PANTHER PTHR37010:SF1 5 97 5.1E-17 T 22-04-2016 SCD_RS09415 81fa2ae347d1bc3aefd1d75aa57f40a8 97 PIRSF PIRSF006223 2 97 7.4E-18 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE SCD_RS09800 14629f49267ebc3b095c1a17d4a6fe66 554 SUPERFAMILY SSF142019 87 292 1.7E-57 T 22-04-2016 SCD_RS09800 14629f49267ebc3b095c1a17d4a6fe66 554 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 131 273 2.7E-48 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain SCD_RS09800 14629f49267ebc3b095c1a17d4a6fe66 554 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 4 435 4.4E-177 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 SCD_RS09800 14629f49267ebc3b095c1a17d4a6fe66 554 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 366 377 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS09800 14629f49267ebc3b095c1a17d4a6fe66 554 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 405 416 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS09800 14629f49267ebc3b095c1a17d4a6fe66 554 SUPERFAMILY SSF46548 323 433 1.74E-15 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SCD_RS09800 14629f49267ebc3b095c1a17d4a6fe66 554 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 554 181.778 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 SCD_RS09800 14629f49267ebc3b095c1a17d4a6fe66 554 Pfam PF13375 RnfC Barrel sandwich hybrid domain 6 107 2.5E-39 T 22-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain SCD_RS09800 14629f49267ebc3b095c1a17d4a6fe66 554 PANTHER PTHR11780 7 471 3.4E-206 T 22-04-2016 SCD_RS09800 14629f49267ebc3b095c1a17d4a6fe66 554 Gene3D G3DSA:1.10.1060.10 360 437 2.9E-13 T 22-04-2016 SCD_RS09800 14629f49267ebc3b095c1a17d4a6fe66 554 PANTHER PTHR11780:SF1 7 471 3.4E-206 T 22-04-2016 SCD_RS09800 14629f49267ebc3b095c1a17d4a6fe66 554 Pfam PF10531 SLBB domain 286 333 4.1E-13 T 22-04-2016 IPR019554 Soluble ligand binding domain SCD_RS05435 12d7944ad84dc0a959b055c1c578ff34 414 PANTHER PTHR30489 2 414 6.3E-111 T 22-04-2016 SCD_RS05435 12d7944ad84dc0a959b055c1c578ff34 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 3 414 3.3E-159 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 SCD_RS05435 12d7944ad84dc0a959b055c1c578ff34 414 Pfam PF02687 FtsX-like permease family 274 407 5.2E-19 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SCD_RS05435 12d7944ad84dc0a959b055c1c578ff34 414 Pfam PF12704 MacB-like periplasmic core domain 26 241 6.8E-21 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SCD_RS05435 12d7944ad84dc0a959b055c1c578ff34 414 PANTHER PTHR30489:SF8 2 414 6.3E-111 T 22-04-2016 SCD_RS03750 a9ca3399828227efe8b463a67d3df78b 159 Hamap MF_00476 Putative nickel-responsive regulator [nikR]. 1 132 27.358 T 22-04-2016 IPR022988 Nickel-responsive transcriptional regulator NikR GO:0003677|GO:0006355|GO:0010045|GO:0016151 SCD_RS03750 a9ca3399828227efe8b463a67d3df78b 159 PANTHER PTHR34719 1 136 3.7E-49 T 22-04-2016 SCD_RS03750 a9ca3399828227efe8b463a67d3df78b 159 Gene3D G3DSA:3.30.70.1150 51 132 7.9E-32 T 22-04-2016 SCD_RS03750 a9ca3399828227efe8b463a67d3df78b 159 SUPERFAMILY SSF55021 53 132 1.74E-24 T 22-04-2016 SCD_RS03750 a9ca3399828227efe8b463a67d3df78b 159 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 42 5.3E-9 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 SCD_RS03750 a9ca3399828227efe8b463a67d3df78b 159 Gene3D G3DSA:1.10.1220.10 1 46 7.8E-21 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 SCD_RS03750 a9ca3399828227efe8b463a67d3df78b 159 SUPERFAMILY SSF47598 1 45 2.3E-11 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 SCD_RS03750 a9ca3399828227efe8b463a67d3df78b 159 Pfam PF08753 NikR C terminal nickel binding domain 54 129 5.8E-31 T 22-04-2016 IPR014864 Transcription factor, NikR, nickel binding C-terminal SCD_RS03750 a9ca3399828227efe8b463a67d3df78b 159 PANTHER PTHR34719:SF2 1 136 3.7E-49 T 22-04-2016 SCD_RS06315 9d1240fe0f534142c53d184bb53c813f 407 SUPERFAMILY SSF63867 329 406 1.11E-18 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SCD_RS06315 9d1240fe0f534142c53d184bb53c813f 407 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 177 314 4.2E-31 T 22-04-2016 IPR001453 MoaB/Mog domain SCD_RS06315 9d1240fe0f534142c53d184bb53c813f 407 SUPERFAMILY SSF63882 6 175 4.71E-55 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SCD_RS06315 9d1240fe0f534142c53d184bb53c813f 407 Gene3D G3DSA:3.40.980.10 164 331 3.8E-64 T 22-04-2016 IPR001453 MoaB/Mog domain SCD_RS06315 9d1240fe0f534142c53d184bb53c813f 407 Gene3D G3DSA:2.170.190.11 51 131 4.9E-30 T 22-04-2016 SCD_RS06315 9d1240fe0f534142c53d184bb53c813f 407 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 168 2.4E-37 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SCD_RS06315 9d1240fe0f534142c53d184bb53c813f 407 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 254 287 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 SCD_RS06315 9d1240fe0f534142c53d184bb53c813f 407 SMART SM00852 181 318 6.3E-46 T 22-04-2016 IPR001453 MoaB/Mog domain SCD_RS06315 9d1240fe0f534142c53d184bb53c813f 407 PANTHER PTHR10192 6 407 9.5E-157 T 22-04-2016 SCD_RS06315 9d1240fe0f534142c53d184bb53c813f 407 Gene3D G3DSA:3.90.105.10 132 163 2.6E-21 T 22-04-2016 SCD_RS06315 9d1240fe0f534142c53d184bb53c813f 407 Pfam PF00994 Probable molybdopterin binding domain 184 316 1.7E-26 T 22-04-2016 IPR001453 MoaB/Mog domain SCD_RS06315 9d1240fe0f534142c53d184bb53c813f 407 SUPERFAMILY SSF53218 178 322 3.53E-45 T 22-04-2016 IPR001453 MoaB/Mog domain SCD_RS06315 9d1240fe0f534142c53d184bb53c813f 407 Pfam PF03454 MoeA C-terminal region (domain IV) 333 402 2.8E-17 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SCD_RS06315 9d1240fe0f534142c53d184bb53c813f 407 Gene3D G3DSA:2.40.340.10 332 403 3.3E-15 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SCD_RS08540 25332ef50e10048ac3e4545ee5936bb8 402 SUPERFAMILY SSF88697 5 165 8.35E-50 T 22-04-2016 IPR015947 PUA-like domain SCD_RS08540 25332ef50e10048ac3e4545ee5936bb8 402 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 7 380 5.8E-119 T 22-04-2016 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: REACT_13433|UniPathway: UPA00140 SCD_RS08540 25332ef50e10048ac3e4545ee5936bb8 402 PANTHER PTHR11055 1 390 1.1E-179 T 22-04-2016 SCD_RS08540 25332ef50e10048ac3e4545ee5936bb8 402 Gene3D G3DSA:3.10.400.10 5 181 7.0E-59 T 22-04-2016 SCD_RS08540 25332ef50e10048ac3e4545ee5936bb8 402 PANTHER PTHR11055:SF19 1 390 1.1E-179 T 22-04-2016 SCD_RS08540 25332ef50e10048ac3e4545ee5936bb8 402 Pfam PF01747 ATP-sulfurylase 173 382 3.8E-85 T 22-04-2016 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SCD_RS08540 25332ef50e10048ac3e4545ee5936bb8 402 SUPERFAMILY SSF52374 172 383 8.76E-80 T 22-04-2016 SCD_RS08540 25332ef50e10048ac3e4545ee5936bb8 402 Pfam PF14306 PUA-like domain 6 161 6.9E-52 T 22-04-2016 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SCD_RS08540 25332ef50e10048ac3e4545ee5936bb8 402 Gene3D G3DSA:3.40.50.620 182 387 5.0E-85 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS08540 25332ef50e10048ac3e4545ee5936bb8 402 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 29 385 44.626 T 22-04-2016 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SCD_RS09940 584180e331a23dc7a6c9114268f50bf7 292 PANTHER PTHR31964 7 89 8.2E-23 T 22-04-2016 SCD_RS09940 584180e331a23dc7a6c9114268f50bf7 292 PANTHER PTHR31964 236 289 8.2E-23 T 22-04-2016 SCD_RS09940 584180e331a23dc7a6c9114268f50bf7 292 Pfam PF00582 Universal stress protein family 6 146 3.1E-27 T 22-04-2016 IPR006016 UspA GO:0006950 SCD_RS09940 584180e331a23dc7a6c9114268f50bf7 292 Pfam PF00582 Universal stress protein family 153 290 3.1E-21 T 22-04-2016 IPR006016 UspA GO:0006950 SCD_RS09940 584180e331a23dc7a6c9114268f50bf7 292 PRINTS PR01438 Universal stress protein signature 106 118 3.5E-13 T 22-04-2016 IPR006015 Universal stress protein A SCD_RS09940 584180e331a23dc7a6c9114268f50bf7 292 PRINTS PR01438 Universal stress protein signature 124 146 3.5E-13 T 22-04-2016 IPR006015 Universal stress protein A SCD_RS09940 584180e331a23dc7a6c9114268f50bf7 292 PRINTS PR01438 Universal stress protein signature 4 22 3.5E-13 T 22-04-2016 IPR006015 Universal stress protein A SCD_RS09940 584180e331a23dc7a6c9114268f50bf7 292 SUPERFAMILY SSF52402 153 291 2.6E-24 T 22-04-2016 SCD_RS09940 584180e331a23dc7a6c9114268f50bf7 292 SUPERFAMILY SSF52402 6 146 5.02E-31 T 22-04-2016 SCD_RS09940 584180e331a23dc7a6c9114268f50bf7 292 Gene3D G3DSA:3.40.50.620 145 290 2.3E-28 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS09940 584180e331a23dc7a6c9114268f50bf7 292 Gene3D G3DSA:3.40.50.620 3 144 5.8E-34 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS09940 584180e331a23dc7a6c9114268f50bf7 292 PANTHER PTHR31964:SF26 7 89 8.2E-23 T 22-04-2016 SCD_RS09940 584180e331a23dc7a6c9114268f50bf7 292 PANTHER PTHR31964:SF26 236 289 8.2E-23 T 22-04-2016 SCD_RS14065 d51ebc62d93c5dfdf31dfce610802dd7 661 Gene3D G3DSA:3.40.50.920 538 661 1.3E-47 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SCD_RS14065 d51ebc62d93c5dfdf31dfce610802dd7 661 Pfam PF02780 Transketolase, C-terminal domain 540 653 4.9E-15 T 22-04-2016 IPR033248 Transketolase, C-terminal domain SCD_RS14065 d51ebc62d93c5dfdf31dfce610802dd7 661 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 660 4.5E-301 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 SCD_RS14065 d51ebc62d93c5dfdf31dfce610802dd7 661 Gene3D G3DSA:3.40.50.970 328 533 2.9E-78 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS14065 d51ebc62d93c5dfdf31dfce610802dd7 661 Gene3D G3DSA:3.40.50.970 3 320 2.8E-127 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS14065 d51ebc62d93c5dfdf31dfce610802dd7 661 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 333 5.8E-160 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SCD_RS14065 d51ebc62d93c5dfdf31dfce610802dd7 661 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 2.6E-46 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SCD_RS14065 d51ebc62d93c5dfdf31dfce610802dd7 661 SUPERFAMILY SSF52518 344 525 5.44E-66 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS14065 d51ebc62d93c5dfdf31dfce610802dd7 661 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SCD_RS14065 d51ebc62d93c5dfdf31dfce610802dd7 661 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SCD_RS14065 d51ebc62d93c5dfdf31dfce610802dd7 661 SMART SM00861 355 525 5.3E-65 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SCD_RS14065 d51ebc62d93c5dfdf31dfce610802dd7 661 SUPERFAMILY SSF52518 5 330 7.02E-120 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS14065 d51ebc62d93c5dfdf31dfce610802dd7 661 SUPERFAMILY SSF52922 533 661 3.01E-45 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SCD_RS13340 971e221d0b92c9e5b9834f4e74686f97 105 SUPERFAMILY SSF46785 8 101 5.46E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS13340 971e221d0b92c9e5b9834f4e74686f97 105 SMART SM00418 20 98 7.6E-26 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SCD_RS13340 971e221d0b92c9e5b9834f4e74686f97 105 PANTHER PTHR33154 6 104 3.5E-25 T 22-04-2016 SCD_RS13340 971e221d0b92c9e5b9834f4e74686f97 105 Gene3D G3DSA:1.10.10.10 9 101 1.4E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS13340 971e221d0b92c9e5b9834f4e74686f97 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 3.8E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SCD_RS13340 971e221d0b92c9e5b9834f4e74686f97 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 22 37 3.8E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SCD_RS13340 971e221d0b92c9e5b9834f4e74686f97 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 52 3.8E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SCD_RS13340 971e221d0b92c9e5b9834f4e74686f97 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 3.8E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SCD_RS13340 971e221d0b92c9e5b9834f4e74686f97 105 Pfam PF01022 Bacterial regulatory protein, arsR family 27 72 5.0E-13 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SCD_RS07120 b2e30cdebffbadc72195585359152c2e 504 SUPERFAMILY SSF56954 2 430 1.05E-75 T 22-04-2016 SCD_RS07120 b2e30cdebffbadc72195585359152c2e 504 PANTHER PTHR30026 6 452 1.3E-50 T 22-04-2016 SCD_RS07120 b2e30cdebffbadc72195585359152c2e 504 Gene3D G3DSA:1.20.1600.10 24 429 3.2E-66 T 22-04-2016 SCD_RS07120 b2e30cdebffbadc72195585359152c2e 504 Pfam PF02321 Outer membrane efflux protein 245 426 1.9E-25 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SCD_RS07120 b2e30cdebffbadc72195585359152c2e 504 Pfam PF02321 Outer membrane efflux protein 30 222 4.6E-22 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SCD_RS04795 f8d407bdcd48e9a0fe31fb52f7842f8b 637 PANTHER PTHR11528 3 637 0.0 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SCD_RS04795 f8d407bdcd48e9a0fe31fb52f7842f8b 637 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 186 1.7E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS04795 f8d407bdcd48e9a0fe31fb52f7842f8b 637 SUPERFAMILY SSF110942 520 631 1.02E-38 T 22-04-2016 SCD_RS04795 f8d407bdcd48e9a0fe31fb52f7842f8b 637 PRINTS PR00775 90kDa heat shock protein signature 30 52 4.1E-61 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SCD_RS04795 f8d407bdcd48e9a0fe31fb52f7842f8b 637 PRINTS PR00775 90kDa heat shock protein signature 124 146 4.1E-61 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SCD_RS04795 f8d407bdcd48e9a0fe31fb52f7842f8b 637 PRINTS PR00775 90kDa heat shock protein signature 176 193 4.1E-61 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SCD_RS04795 f8d407bdcd48e9a0fe31fb52f7842f8b 637 PRINTS PR00775 90kDa heat shock protein signature 9 29 4.1E-61 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SCD_RS04795 f8d407bdcd48e9a0fe31fb52f7842f8b 637 PRINTS PR00775 90kDa heat shock protein signature 97 114 4.1E-61 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SCD_RS04795 f8d407bdcd48e9a0fe31fb52f7842f8b 637 PRINTS PR00775 90kDa heat shock protein signature 194 212 4.1E-61 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SCD_RS04795 f8d407bdcd48e9a0fe31fb52f7842f8b 637 PRINTS PR00775 90kDa heat shock protein signature 79 96 4.1E-61 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SCD_RS04795 f8d407bdcd48e9a0fe31fb52f7842f8b 637 SMART SM00387 31 188 5.0E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS04795 f8d407bdcd48e9a0fe31fb52f7842f8b 637 Pfam PF00183 Hsp90 protein 218 632 1.7E-136 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SCD_RS04795 f8d407bdcd48e9a0fe31fb52f7842f8b 637 SUPERFAMILY SSF54211 238 493 1.74E-99 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SCD_RS04795 f8d407bdcd48e9a0fe31fb52f7842f8b 637 Gene3D G3DSA:3.30.565.10 9 245 1.0E-80 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS04795 f8d407bdcd48e9a0fe31fb52f7842f8b 637 PIRSF PIRSF002583 2 637 2.1E-215 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SCD_RS04795 f8d407bdcd48e9a0fe31fb52f7842f8b 637 PANTHER PTHR11528:SF44 3 637 0.0 T 22-04-2016 SCD_RS04795 f8d407bdcd48e9a0fe31fb52f7842f8b 637 SUPERFAMILY SSF55874 9 220 5.76E-66 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS04795 f8d407bdcd48e9a0fe31fb52f7842f8b 637 Hamap MF_00505 Chaperone protein HtpG [htpG]. 6 632 33.078 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SCD_RS03860 3fa7eafa4765909a53c4a26c13e56378 694 Gene3D G3DSA:3.30.450.40 305 446 1.1E-6 T 22-04-2016 IPR029016 GAF domain-like SCD_RS03860 3fa7eafa4765909a53c4a26c13e56378 694 Gene3D G3DSA:1.10.287.130 470 525 5.3E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS03860 3fa7eafa4765909a53c4a26c13e56378 694 PANTHER PTHR24423 464 685 7.4E-48 T 22-04-2016 SCD_RS03860 3fa7eafa4765909a53c4a26c13e56378 694 PANTHER PTHR24423 1 24 7.4E-48 T 22-04-2016 SCD_RS03860 3fa7eafa4765909a53c4a26c13e56378 694 SUPERFAMILY SSF109604 1 247 2.2E-52 T 22-04-2016 SCD_RS03860 3fa7eafa4765909a53c4a26c13e56378 694 SUPERFAMILY SSF55874 536 684 1.1E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS03860 3fa7eafa4765909a53c4a26c13e56378 694 PANTHER PTHR24423:SF520 464 685 7.4E-48 T 22-04-2016 SCD_RS03860 3fa7eafa4765909a53c4a26c13e56378 694 PANTHER PTHR24423:SF520 1 24 7.4E-48 T 22-04-2016 SCD_RS03860 3fa7eafa4765909a53c4a26c13e56378 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 645 1.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS03860 3fa7eafa4765909a53c4a26c13e56378 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 631 1.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS03860 3fa7eafa4765909a53c4a26c13e56378 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 671 684 1.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS03860 3fa7eafa4765909a53c4a26c13e56378 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 665 1.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS03860 3fa7eafa4765909a53c4a26c13e56378 694 Pfam PF08668 HDOD domain 2 187 8.0E-45 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS03860 3fa7eafa4765909a53c4a26c13e56378 694 SUPERFAMILY SSF55781 305 455 3.58E-6 T 22-04-2016 IPR029016 GAF domain-like SCD_RS03860 3fa7eafa4765909a53c4a26c13e56378 694 Gene3D G3DSA:3.30.565.10 535 686 7.9E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS03860 3fa7eafa4765909a53c4a26c13e56378 694 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 576 685 1.9E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS03860 3fa7eafa4765909a53c4a26c13e56378 694 SUPERFAMILY SSF47384 461 527 2.55E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS03860 3fa7eafa4765909a53c4a26c13e56378 694 Gene3D G3DSA:1.10.3150.10 1 247 1.1E-59 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS03860 3fa7eafa4765909a53c4a26c13e56378 694 SMART SM00387 575 687 2.9E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS04885 e2e53041ccf36a2980f14bf68d2ed9ff 189 SUPERFAMILY SSF140478 24 174 6.02E-50 T 22-04-2016 IPR023353 LemA-like domain SCD_RS04885 e2e53041ccf36a2980f14bf68d2ed9ff 189 Pfam PF04011 LemA family 5 184 3.2E-62 T 22-04-2016 IPR007156 LemA SCD_RS04885 e2e53041ccf36a2980f14bf68d2ed9ff 189 Gene3D G3DSA:1.20.1440.20 13 184 3.0E-57 T 22-04-2016 IPR023353 LemA-like domain SCD_RS04885 e2e53041ccf36a2980f14bf68d2ed9ff 189 PANTHER PTHR34478 1 189 3.8E-74 T 22-04-2016 SCD_RS04885 e2e53041ccf36a2980f14bf68d2ed9ff 189 PANTHER PTHR34478:SF1 1 189 3.8E-74 T 22-04-2016 SCD_RS03185 857bdd36911d6d0f12b4c9946be0e553 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 7.4E-40 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03185 857bdd36911d6d0f12b4c9946be0e553 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.115 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03185 857bdd36911d6d0f12b4c9946be0e553 117 SUPERFAMILY SSF53137 3 115 6.98E-52 T 22-04-2016 SCD_RS03185 857bdd36911d6d0f12b4c9946be0e553 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 3.9E-40 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03185 857bdd36911d6d0f12b4c9946be0e553 117 Gene3D G3DSA:3.30.420.100 23 117 1.3E-35 T 22-04-2016 SCD_RS03185 857bdd36911d6d0f12b4c9946be0e553 117 PANTHER PTHR12899 1 117 2.2E-40 T 22-04-2016 SCD_RS09290 dfa50cd2e0291c1c2f8f15a3bea91d41 398 ProSitePatterns PS01219 Ammonium transporters signature. 156 181 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 SCD_RS09290 dfa50cd2e0291c1c2f8f15a3bea91d41 398 SUPERFAMILY SSF111352 7 374 4.18E-96 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 SCD_RS09290 dfa50cd2e0291c1c2f8f15a3bea91d41 398 PANTHER PTHR11730:SF6 1 395 2.3E-126 T 22-04-2016 SCD_RS09290 dfa50cd2e0291c1c2f8f15a3bea91d41 398 Gene3D G3DSA:1.10.3430.10 3 374 5.4E-95 T 22-04-2016 IPR029020 Ammonium/urea transporter SCD_RS09290 dfa50cd2e0291c1c2f8f15a3bea91d41 398 PANTHER PTHR11730 1 395 2.3E-126 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 SCD_RS09290 dfa50cd2e0291c1c2f8f15a3bea91d41 398 Pfam PF00909 Ammonium Transporter Family 12 389 8.6E-90 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 SCD_RS02485 5e7c64835e62b13ca0fb746a4e20d7b6 487 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 74.484 T 22-04-2016 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 SCD_RS02485 5e7c64835e62b13ca0fb746a4e20d7b6 487 PANTHER PTHR30108:SF1 1 487 4.5E-261 T 22-04-2016 SCD_RS02485 5e7c64835e62b13ca0fb746a4e20d7b6 487 Gene3D G3DSA:3.40.1670.10 337 454 2.3E-54 T 22-04-2016 SCD_RS02485 5e7c64835e62b13ca0fb746a4e20d7b6 487 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 2.3E-171 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 SCD_RS02485 5e7c64835e62b13ca0fb746a4e20d7b6 487 SUPERFAMILY SSF143968 323 486 2.75E-67 T 22-04-2016 SCD_RS02485 5e7c64835e62b13ca0fb746a4e20d7b6 487 PANTHER PTHR30108 1 487 4.5E-261 T 22-04-2016 SCD_RS02485 5e7c64835e62b13ca0fb746a4e20d7b6 487 SUPERFAMILY SSF50475 3 322 4.32E-127 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SCD_RS02485 5e7c64835e62b13ca0fb746a4e20d7b6 487 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 2.3E-170 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 SCD_RS02485 5e7c64835e62b13ca0fb746a4e20d7b6 487 Gene3D G3DSA:1.20.5.570 455 487 1.4E-16 T 22-04-2016 SCD_RS06825 7f5307270718ed8252c371192836f627 279 PANTHER PTHR35811 4 277 6.6E-69 T 22-04-2016 SCD_RS06825 7f5307270718ed8252c371192836f627 279 Pfam PF01936 NYN domain 7 140 4.8E-32 T 22-04-2016 IPR021139 NYN domain, limkain-b1-type SCD_RS06825 7f5307270718ed8252c371192836f627 279 Pfam PF12872 OST-HTH/LOTUS domain 197 259 8.1E-14 T 22-04-2016 IPR025605 OST-HTH/LOTUS domain SCD_RS06825 7f5307270718ed8252c371192836f627 279 Gene3D G3DSA:3.40.50.1010 3 143 1.2E-28 T 22-04-2016 IPR029060 PIN domain-like SCD_RS06825 7f5307270718ed8252c371192836f627 279 PANTHER PTHR35811:SF1 4 277 6.6E-69 T 22-04-2016 SCD_RS05790 f1ffa466e7943491bc8015ccbe0df656 235 SUPERFAMILY SSF53098 1 175 7.59E-57 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS05790 f1ffa466e7943491bc8015ccbe0df656 235 PANTHER PTHR30231 1 229 2.6E-97 T 22-04-2016 SCD_RS05790 f1ffa466e7943491bc8015ccbe0df656 235 Pfam PF00929 Exonuclease 4 165 1.3E-36 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SCD_RS05790 f1ffa466e7943491bc8015ccbe0df656 235 Gene3D G3DSA:3.30.420.10 1 175 1.8E-63 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS05790 f1ffa466e7943491bc8015ccbe0df656 235 SMART SM00479 2 174 4.9E-47 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SCD_RS05790 f1ffa466e7943491bc8015ccbe0df656 235 PANTHER PTHR30231:SF0 1 229 2.6E-97 T 22-04-2016 SCD_RS05790 f1ffa466e7943491bc8015ccbe0df656 235 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 188 1.1E-59 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS05790 f1ffa466e7943491bc8015ccbe0df656 235 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 229 1.4E-88 T 22-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 7.9E-22 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 Pfam PF00013 KH domain 556 614 1.2E-8 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 SUPERFAMILY SSF54211 291 488 7.59E-50 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 SUPERFAMILY SSF54791 554 639 1.74E-21 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 SUPERFAMILY SSF55666 144 233 7.01E-29 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 SUPERFAMILY SSF54211 3 143 2.38E-51 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 Gene3D G3DSA:3.30.230.70 313 542 1.5E-88 T 22-04-2016 IPR027408 PNPase/RNase PH domain SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 Gene3D G3DSA:3.30.230.70 3 224 1.1E-85 T 22-04-2016 IPR027408 PNPase/RNase PH domain SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 SUPERFAMILY SSF50249 620 699 1.48E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 Gene3D G3DSA:3.30.1370.10 551 619 1.3E-25 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 PANTHER PTHR11252:SF0 1 694 0.0 T 22-04-2016 SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 SUPERFAMILY SSF55666 450 548 2.38E-27 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 Gene3D G3DSA:2.40.50.140 620 693 2.3E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 693 30.451 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 SMART SM00322 552 617 4.0E-11 T 22-04-2016 IPR004087 K Homology domain GO:0003676 SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 PANTHER PTHR11252 1 694 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 Pfam PF03725 3' exoribonuclease family, domain 2 461 528 2.0E-4 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 Pfam PF03725 3' exoribonuclease family, domain 2 146 209 8.6E-12 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 Pfam PF00575 S1 RNA binding domain 619 690 5.3E-14 T 22-04-2016 IPR003029 S1 domain GO:0003676 SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 Pfam PF01138 3' exoribonuclease family, domain 1 324 456 6.8E-22 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 6.5E-22 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 SMART SM00316 620 690 1.0E-22 T 22-04-2016 IPR022967 RNA-binding domain, S1 SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 Gene3D G3DSA:1.10.10.400 238 312 5.2E-22 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SCD_RS08475 bfaa2e02f296883d530ea63d782111fe 707 PIRSF PIRSF005499 1 706 5.3E-298 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SCD_RS06700 db661a10f3fad96129f43dec31f6f4f6 313 SUPERFAMILY SSF51735 6 311 4.59E-71 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS06700 db661a10f3fad96129f43dec31f6f4f6 313 Gene3D G3DSA:3.40.50.720 6 209 2.3E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS06700 db661a10f3fad96129f43dec31f6f4f6 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 241 8.9E-80 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SCD_RS06700 db661a10f3fad96129f43dec31f6f4f6 313 PANTHER PTHR10366:SF246 6 311 2.3E-141 T 22-04-2016 SCD_RS06700 db661a10f3fad96129f43dec31f6f4f6 313 Gene3D G3DSA:3.90.25.10 288 308 1.2E-7 T 22-04-2016 SCD_RS06700 db661a10f3fad96129f43dec31f6f4f6 313 Gene3D G3DSA:3.90.25.10 210 232 1.2E-7 T 22-04-2016 SCD_RS06700 db661a10f3fad96129f43dec31f6f4f6 313 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 4 309 49.543 T 22-04-2016 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|UniPathway: UPA00128 SCD_RS06700 db661a10f3fad96129f43dec31f6f4f6 313 PANTHER PTHR10366 6 311 2.3E-141 T 22-04-2016 SCD_RS14020 56de8a8143e31340bae3e60250b8e726 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 212 228 2.5E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS14020 56de8a8143e31340bae3e60250b8e726 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 198 212 2.5E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS14020 56de8a8143e31340bae3e60250b8e726 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 228 240 2.5E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS14020 56de8a8143e31340bae3e60250b8e726 261 PANTHER PTHR26402:SF151 199 253 7.2E-15 T 22-04-2016 SCD_RS14020 56de8a8143e31340bae3e60250b8e726 261 ProSitePatterns PS00622 LuxR-type HTH domain signature. 212 239 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS14020 56de8a8143e31340bae3e60250b8e726 261 SUPERFAMILY SSF46894 194 258 1.02E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SCD_RS14020 56de8a8143e31340bae3e60250b8e726 261 Gene3D G3DSA:1.10.10.10 199 257 9.7E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS14020 56de8a8143e31340bae3e60250b8e726 261 Pfam PF00196 Bacterial regulatory proteins, luxR family 198 252 2.8E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS14020 56de8a8143e31340bae3e60250b8e726 261 PANTHER PTHR26402 199 253 7.2E-15 T 22-04-2016 SCD_RS14020 56de8a8143e31340bae3e60250b8e726 261 SMART SM00421 195 252 2.7E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS12100 299a9b2b28697d8869da90c5c37b7313 587 Pfam PF08278 DNA primase DnaG DnaB-binding 448 571 4.1E-21 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 SCD_RS12100 299a9b2b28697d8869da90c5c37b7313 587 Gene3D G3DSA:1.10.860.10 434 572 1.6E-18 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal SCD_RS12100 299a9b2b28697d8869da90c5c37b7313 587 PANTHER PTHR30313 1 419 1.3E-153 T 22-04-2016 SCD_RS12100 299a9b2b28697d8869da90c5c37b7313 587 Gene3D G3DSA:3.90.580.10 1 98 8.4E-42 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SCD_RS12100 299a9b2b28697d8869da90c5c37b7313 587 Pfam PF08275 DNA primase catalytic core, N-terminal domain 123 243 3.2E-40 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal SCD_RS12100 299a9b2b28697d8869da90c5c37b7313 587 SMART SM00493 251 322 2.8E-18 T 22-04-2016 IPR006171 Toprim domain SCD_RS12100 299a9b2b28697d8869da90c5c37b7313 587 SMART SM00400 33 87 3.3E-34 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SCD_RS12100 299a9b2b28697d8869da90c5c37b7313 587 Gene3D G3DSA:3.90.980.10 113 232 3.3E-42 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal SCD_RS12100 299a9b2b28697d8869da90c5c37b7313 587 Pfam PF13155 Toprim-like 254 342 2.1E-16 T 22-04-2016 SCD_RS12100 299a9b2b28697d8869da90c5c37b7313 587 Hamap MF_00974 DNA primase [dnaG]. 1 573 29.336 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 SCD_RS12100 299a9b2b28697d8869da90c5c37b7313 587 SUPERFAMILY SSF57783 1 98 2.72E-38 T 22-04-2016 SCD_RS12100 299a9b2b28697d8869da90c5c37b7313 587 SUPERFAMILY SSF117023 444 572 9.42E-15 T 22-04-2016 SCD_RS12100 299a9b2b28697d8869da90c5c37b7313 587 Gene3D G3DSA:1.20.50.20 360 417 7.2E-20 T 22-04-2016 SCD_RS12100 299a9b2b28697d8869da90c5c37b7313 587 Gene3D G3DSA:3.40.1360.10 233 359 4.7E-47 T 22-04-2016 SCD_RS12100 299a9b2b28697d8869da90c5c37b7313 587 Pfam PF10410 DnaB-helicase binding domain of primase 361 415 3.0E-12 T 22-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 SCD_RS12100 299a9b2b28697d8869da90c5c37b7313 587 SMART SM00766 446 572 2.1E-16 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 SCD_RS12100 299a9b2b28697d8869da90c5c37b7313 587 TIGRFAM TIGR01391 dnaG: DNA primase 1 409 5.7E-148 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 SCD_RS12100 299a9b2b28697d8869da90c5c37b7313 587 SUPERFAMILY SSF56731 113 415 4.58E-107 T 22-04-2016 SCD_RS12100 299a9b2b28697d8869da90c5c37b7313 587 Pfam PF01807 CHC2 zinc finger 3 98 5.2E-40 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SCD_RS13185 35c1d35ff896696ea50d6efc01af0d36 330 PANTHER PTHR22976 20 328 2.0E-157 T 22-04-2016 SCD_RS13185 35c1d35ff896696ea50d6efc01af0d36 330 Gene3D G3DSA:3.20.20.70 21 327 3.0E-100 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS13185 35c1d35ff896696ea50d6efc01af0d36 330 Hamap MF_01694 Biotin synthase [bioB]. 20 328 42.601 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SCD_RS13185 35c1d35ff896696ea50d6efc01af0d36 330 SUPERFAMILY SSF102114 21 326 6.02E-88 T 22-04-2016 SCD_RS13185 35c1d35ff896696ea50d6efc01af0d36 330 SMART SM00876 235 327 3.9E-45 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SCD_RS13185 35c1d35ff896696ea50d6efc01af0d36 330 SMART SM00729 58 270 1.7E-33 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SCD_RS13185 35c1d35ff896696ea50d6efc01af0d36 330 PIRSF PIRSF001619 4 330 4.9E-131 T 22-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SCD_RS13185 35c1d35ff896696ea50d6efc01af0d36 330 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 235 325 3.9E-20 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SCD_RS13185 35c1d35ff896696ea50d6efc01af0d36 330 TIGRFAM TIGR00433 bioB: biotin synthase 31 325 1.4E-123 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SCD_RS13185 35c1d35ff896696ea50d6efc01af0d36 330 PANTHER PTHR22976:SF1 20 328 2.0E-157 T 22-04-2016 SCD_RS13185 35c1d35ff896696ea50d6efc01af0d36 330 Pfam PF04055 Radical SAM superfamily 65 216 2.4E-14 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SCD_RS04995 7922a8476aba39c64b05ab8d43624f18 438 PANTHER PTHR30024:SF13 5 418 5.8E-52 T 22-04-2016 SCD_RS04995 7922a8476aba39c64b05ab8d43624f18 438 Gene3D G3DSA:3.40.190.10 43 120 2.9E-10 T 22-04-2016 SCD_RS04995 7922a8476aba39c64b05ab8d43624f18 438 Gene3D G3DSA:3.40.190.10 254 314 2.9E-10 T 22-04-2016 SCD_RS04995 7922a8476aba39c64b05ab8d43624f18 438 PANTHER PTHR30024 5 418 5.8E-52 T 22-04-2016 SCD_RS04995 7922a8476aba39c64b05ab8d43624f18 438 SUPERFAMILY SSF53850 39 314 1.52E-43 T 22-04-2016 SCD_RS04995 7922a8476aba39c64b05ab8d43624f18 438 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 20 286 1.7E-25 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family SCD_RS04995 7922a8476aba39c64b05ab8d43624f18 438 Gene3D G3DSA:3.40.190.10 121 253 6.3E-22 T 22-04-2016 SCD_RS04995 7922a8476aba39c64b05ab8d43624f18 438 Pfam PF16868 NMT1-like family 45 314 4.7E-22 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family SCD_RS09760 79f9b679c198f9e4e7cfc2bc01cfa24d 210 PANTHER PTHR36118 2 208 3.2E-49 T 22-04-2016 SCD_RS09760 79f9b679c198f9e4e7cfc2bc01cfa24d 210 SMART SM00900 97 189 2.2E-35 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 SCD_RS09760 79f9b679c198f9e4e7cfc2bc01cfa24d 210 PANTHER PTHR36118:SF1 2 208 3.2E-49 T 22-04-2016 SCD_RS09760 79f9b679c198f9e4e7cfc2bc01cfa24d 210 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 10 190 3.6E-54 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 SCD_RS09760 79f9b679c198f9e4e7cfc2bc01cfa24d 210 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 3 191 24.464 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 SCD_RS09760 79f9b679c198f9e4e7cfc2bc01cfa24d 210 PIRSF PIRSF006091 1 203 1.1E-73 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 SCD_RS09760 79f9b679c198f9e4e7cfc2bc01cfa24d 210 Pfam PF04205 FMN-binding domain 97 186 2.0E-19 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 SCD_RS14420 ff86a37ca404b303966272221bf404de 338 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 3.6E-29 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SCD_RS14420 ff86a37ca404b303966272221bf404de 338 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 3.6E-29 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SCD_RS14420 ff86a37ca404b303966272221bf404de 338 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 3.6E-29 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SCD_RS14420 ff86a37ca404b303966272221bf404de 338 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 3.6E-29 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SCD_RS14420 ff86a37ca404b303966272221bf404de 338 SUPERFAMILY SSF51735 2 330 1.9E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS14420 ff86a37ca404b303966272221bf404de 338 PANTHER PTHR10366:SF77 252 338 4.5E-180 T 22-04-2016 SCD_RS14420 ff86a37ca404b303966272221bf404de 338 PANTHER PTHR10366:SF77 2 233 4.5E-180 T 22-04-2016 SCD_RS14420 ff86a37ca404b303966272221bf404de 338 PANTHER PTHR10366 2 233 4.5E-180 T 22-04-2016 SCD_RS14420 ff86a37ca404b303966272221bf404de 338 Gene3D G3DSA:3.90.25.10 310 330 3.7E-11 T 22-04-2016 SCD_RS14420 ff86a37ca404b303966272221bf404de 338 Gene3D G3DSA:3.90.25.10 210 238 3.7E-11 T 22-04-2016 SCD_RS14420 ff86a37ca404b303966272221bf404de 338 Gene3D G3DSA:3.40.50.720 2 209 1.1E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS14420 ff86a37ca404b303966272221bf404de 338 PANTHER PTHR10366 252 338 4.5E-180 T 22-04-2016 SCD_RS14420 ff86a37ca404b303966272221bf404de 338 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 262 3.6E-56 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SCD_RS07020 5b5e207fb2a083814eb15e0bf8211c8c 217 Gene3D G3DSA:1.10.10.60 21 73 1.8E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS07020 5b5e207fb2a083814eb15e0bf8211c8c 217 SUPERFAMILY SSF46689 13 99 1.55E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS07020 5b5e207fb2a083814eb15e0bf8211c8c 217 PANTHER PTHR30055 10 209 4.2E-32 T 22-04-2016 SCD_RS07020 5b5e207fb2a083814eb15e0bf8211c8c 217 Gene3D G3DSA:1.10.357.10 74 212 2.2E-27 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SCD_RS07020 5b5e207fb2a083814eb15e0bf8211c8c 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 72 2.1E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SCD_RS07020 5b5e207fb2a083814eb15e0bf8211c8c 217 SUPERFAMILY SSF48498 94 209 8.9E-22 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SCD_RS07020 5b5e207fb2a083814eb15e0bf8211c8c 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 2.1E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SCD_RS07020 5b5e207fb2a083814eb15e0bf8211c8c 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 2.1E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SCD_RS12700 b57d797e2c48bbf6afdfe04a624893f3 706 SMART SM00836 602 704 2.2E-4 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SCD_RS12700 b57d797e2c48bbf6afdfe04a624893f3 706 PANTHER PTHR30075 1 706 1.7E-262 T 22-04-2016 SCD_RS12700 b57d797e2c48bbf6afdfe04a624893f3 706 Gene3D G3DSA:1.10.3210.10 380 485 2.7E-7 T 22-04-2016 IPR006674 HD domain SCD_RS12700 b57d797e2c48bbf6afdfe04a624893f3 706 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 52 64 5.3E-33 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SCD_RS12700 b57d797e2c48bbf6afdfe04a624893f3 706 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 334 350 5.3E-33 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SCD_RS12700 b57d797e2c48bbf6afdfe04a624893f3 706 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 262 277 5.3E-33 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SCD_RS12700 b57d797e2c48bbf6afdfe04a624893f3 706 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 5.3E-33 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SCD_RS12700 b57d797e2c48bbf6afdfe04a624893f3 706 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 410 429 5.3E-33 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SCD_RS12700 b57d797e2c48bbf6afdfe04a624893f3 706 PANTHER PTHR30075:SF2 1 706 1.7E-262 T 22-04-2016 SCD_RS12700 b57d797e2c48bbf6afdfe04a624893f3 706 Gene3D G3DSA:1.10.730.10 598 697 2.9E-7 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS12700 b57d797e2c48bbf6afdfe04a624893f3 706 Pfam PF05746 DALR anticodon binding domain 598 697 4.4E-10 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SCD_RS12700 b57d797e2c48bbf6afdfe04a624893f3 706 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 704 23.983 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SCD_RS12700 b57d797e2c48bbf6afdfe04a624893f3 706 SUPERFAMILY SSF109604 365 506 3.72E-19 T 22-04-2016 SCD_RS12700 b57d797e2c48bbf6afdfe04a624893f3 706 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 566 3.5E-201 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SCD_RS12700 b57d797e2c48bbf6afdfe04a624893f3 706 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 704 2.0E-203 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SCD_RS08305 155743794bb1c18566e02f51c53b07e5 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SCD_RS08305 155743794bb1c18566e02f51c53b07e5 273 SUPERFAMILY SSF51161 2 256 8.18E-78 T 22-04-2016 IPR011004 Trimeric LpxA-like SCD_RS08305 155743794bb1c18566e02f51c53b07e5 273 PANTHER PTHR19136 13 273 4.0E-129 T 22-04-2016 SCD_RS08305 155743794bb1c18566e02f51c53b07e5 273 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 1.6E-14 T 22-04-2016 IPR001451 Hexapeptide repeat SCD_RS08305 155743794bb1c18566e02f51c53b07e5 273 Gene3D G3DSA:2.160.10.10 89 255 4.5E-62 T 22-04-2016 SCD_RS08305 155743794bb1c18566e02f51c53b07e5 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 166 4.5E-5 T 22-04-2016 IPR001451 Hexapeptide repeat SCD_RS08305 155743794bb1c18566e02f51c53b07e5 273 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 9.8E-26 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SCD_RS08305 155743794bb1c18566e02f51c53b07e5 273 PANTHER PTHR19136:SF52 13 273 4.0E-129 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SCD_RS08305 155743794bb1c18566e02f51c53b07e5 273 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 273 1.6E-147 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SCD_RS08305 155743794bb1c18566e02f51c53b07e5 273 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 57.406 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SCD_RS08305 155743794bb1c18566e02f51c53b07e5 273 Gene3D G3DSA:1.10.166.10 1 69 7.5E-31 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SCD_RS00455 5b74888d9ec00db3b5fa2580bd7855a6 213 Pfam PF00156 Phosphoribosyl transferase domain 40 157 2.3E-14 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SCD_RS00455 5b74888d9ec00db3b5fa2580bd7855a6 213 PANTHER PTHR19278 1 212 2.5E-104 T 22-04-2016 SCD_RS00455 5b74888d9ec00db3b5fa2580bd7855a6 213 SUPERFAMILY SSF53271 2 211 4.56E-49 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SCD_RS00455 5b74888d9ec00db3b5fa2580bd7855a6 213 Gene3D G3DSA:3.40.50.2020 6 211 1.8E-76 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SCD_RS00455 5b74888d9ec00db3b5fa2580bd7855a6 213 PANTHER PTHR19278:SF36 1 212 2.5E-104 T 22-04-2016 SCD_RS00455 5b74888d9ec00db3b5fa2580bd7855a6 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 186 4.0E-56 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS00455 5b74888d9ec00db3b5fa2580bd7855a6 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 33.062 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS11690 dad155e4a29a2f5473edc1527f61a550 305 Pfam PF03690 Uncharacterised protein family (UPF0160) 16 303 2.0E-80 T 22-04-2016 IPR003226 Metal-dependent protein hydrolase SCD_RS11690 dad155e4a29a2f5473edc1527f61a550 305 PANTHER PTHR11215 17 304 1.3E-63 T 22-04-2016 IPR003226 Metal-dependent protein hydrolase SCD_RS11690 dad155e4a29a2f5473edc1527f61a550 305 PANTHER PTHR11215:SF1 17 304 1.3E-63 T 22-04-2016 SCD_RS02980 9bd8f64af8c72b73f2af45c13cb0755b 248 Gene3D G3DSA:3.40.1390.30 108 215 3.1E-27 T 22-04-2016 SCD_RS02980 9bd8f64af8c72b73f2af45c13cb0755b 248 SUPERFAMILY SSF102705 1 247 3.14E-73 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SCD_RS02980 9bd8f64af8c72b73f2af45c13cb0755b 248 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 5 247 2.0E-57 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SCD_RS02980 9bd8f64af8c72b73f2af45c13cb0755b 248 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 9 235 7.9E-49 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SCD_RS02980 9bd8f64af8c72b73f2af45c13cb0755b 248 PANTHER PTHR13799 1 244 7.1E-61 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SCD_RS02980 9bd8f64af8c72b73f2af45c13cb0755b 248 Gene3D G3DSA:3.40.1390.30 1 107 2.6E-29 T 22-04-2016 SCD_RS08105 b0073bcb4747757678b8cb28d1154d05 266 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 172 190 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SCD_RS08105 b0073bcb4747757678b8cb28d1154d05 266 Gene3D G3DSA:3.90.230.10 3 255 1.5E-98 T 22-04-2016 IPR000994 Peptidase M24, structural domain SCD_RS08105 b0073bcb4747757678b8cb28d1154d05 266 PANTHER PTHR10804:SF75 1 253 8.5E-149 T 22-04-2016 SCD_RS08105 b0073bcb4747757678b8cb28d1154d05 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 74 87 4.6E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SCD_RS08105 b0073bcb4747757678b8cb28d1154d05 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 96 112 4.6E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SCD_RS08105 b0073bcb4747757678b8cb28d1154d05 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 166 178 4.6E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SCD_RS08105 b0073bcb4747757678b8cb28d1154d05 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 197 209 4.6E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SCD_RS08105 b0073bcb4747757678b8cb28d1154d05 266 Pfam PF00557 Metallopeptidase family M24 12 246 2.1E-54 T 22-04-2016 IPR000994 Peptidase M24, structural domain SCD_RS08105 b0073bcb4747757678b8cb28d1154d05 266 Hamap MF_01974 Methionine aminopeptidase [map]. 3 255 41.529 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SCD_RS08105 b0073bcb4747757678b8cb28d1154d05 266 PANTHER PTHR10804 1 253 8.5E-149 T 22-04-2016 SCD_RS08105 b0073bcb4747757678b8cb28d1154d05 266 SUPERFAMILY SSF55920 3 254 3.14E-91 T 22-04-2016 IPR000994 Peptidase M24, structural domain SCD_RS08105 b0073bcb4747757678b8cb28d1154d05 266 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 254 1.2E-94 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SCD_RS11080 606f5a944e12de59803d2b074f1f8abc 250 SMART SM00471 52 187 3.4E-10 T 22-04-2016 IPR003607 HD/PDEase domain SCD_RS11080 606f5a944e12de59803d2b074f1f8abc 250 Gene3D G3DSA:1.10.3210.10 52 218 2.9E-25 T 22-04-2016 IPR006674 HD domain SCD_RS11080 606f5a944e12de59803d2b074f1f8abc 250 SUPERFAMILY SSF109604 45 214 1.05E-37 T 22-04-2016 SCD_RS11080 606f5a944e12de59803d2b074f1f8abc 250 Pfam PF13487 HD domain 107 168 8.6E-23 T 22-04-2016 SCD_RS09535 c02b035f3370a84185280ea4fe0d7b0d 547 Pfam PF00342 Phosphoglucose isomerase 49 539 6.8E-238 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SCD_RS09535 c02b035f3370a84185280ea4fe0d7b0d 547 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 263 276 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SCD_RS09535 c02b035f3370a84185280ea4fe0d7b0d 547 PANTHER PTHR11469:SF4 1 546 0.0 T 22-04-2016 SCD_RS09535 c02b035f3370a84185280ea4fe0d7b0d 547 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 43 522 42.507 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SCD_RS09535 c02b035f3370a84185280ea4fe0d7b0d 547 Gene3D G3DSA:3.40.50.10490 8 95 1.7E-146 T 22-04-2016 SCD_RS09535 c02b035f3370a84185280ea4fe0d7b0d 547 Gene3D G3DSA:3.40.50.10490 291 504 1.7E-146 T 22-04-2016 SCD_RS09535 c02b035f3370a84185280ea4fe0d7b0d 547 Gene3D G3DSA:1.10.1390.10 505 545 4.2E-22 T 22-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SCD_RS09535 c02b035f3370a84185280ea4fe0d7b0d 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 277 7.1E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SCD_RS09535 c02b035f3370a84185280ea4fe0d7b0d 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 495 508 7.1E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SCD_RS09535 c02b035f3370a84185280ea4fe0d7b0d 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 147 166 7.1E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SCD_RS09535 c02b035f3370a84185280ea4fe0d7b0d 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 481 495 7.1E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SCD_RS09535 c02b035f3370a84185280ea4fe0d7b0d 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 463 481 7.1E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SCD_RS09535 c02b035f3370a84185280ea4fe0d7b0d 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 357 7.1E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SCD_RS09535 c02b035f3370a84185280ea4fe0d7b0d 547 PANTHER PTHR11469 1 546 0.0 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SCD_RS09535 c02b035f3370a84185280ea4fe0d7b0d 547 Gene3D G3DSA:3.40.50.10490 96 289 3.4E-87 T 22-04-2016 SCD_RS09535 c02b035f3370a84185280ea4fe0d7b0d 547 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 495 512 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SCD_RS09535 c02b035f3370a84185280ea4fe0d7b0d 547 SUPERFAMILY SSF53697 4 544 1.03E-226 T 22-04-2016 SCD_RS02940 315ae0288595de263952937347baade7 131 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 107 9.0E-36 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 SCD_RS02940 315ae0288595de263952937347baade7 131 SUPERFAMILY SSF141734 6 123 1.16E-49 T 22-04-2016 SCD_RS02940 315ae0288595de263952937347baade7 131 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 7 111 32.411 T 22-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 SCD_RS02940 315ae0288595de263952937347baade7 131 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 110 6.0E-24 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 SCD_RS02940 315ae0288595de263952937347baade7 131 PANTHER PTHR21256 1 131 6.9E-63 T 22-04-2016 SCD_RS02350 4af8a72df54912adbb508b957438a7bd 139 SUPERFAMILY SSF46626 28 134 1.18E-27 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS02350 4af8a72df54912adbb508b957438a7bd 139 Pfam PF09086 Domain of unknown function (DUF1924) 43 133 5.1E-38 T 22-04-2016 IPR015170 Protein of unknown function DUF1924 SCD_RS02350 4af8a72df54912adbb508b957438a7bd 139 Gene3D G3DSA:1.10.760.10 26 135 1.8E-41 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS04730 9a9b105069a71cad61aa032bd4ec4466 493 Pfam PF00361 Proton-conducting membrane transporter 134 417 2.5E-83 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SCD_RS04730 9a9b105069a71cad61aa032bd4ec4466 493 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 8 487 2.3E-189 T 22-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 SCD_RS04730 9a9b105069a71cad61aa032bd4ec4466 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 326 345 1.5E-48 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SCD_RS04730 9a9b105069a71cad61aa032bd4ec4466 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 169 193 1.5E-48 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SCD_RS04730 9a9b105069a71cad61aa032bd4ec4466 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 1.5E-48 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SCD_RS04730 9a9b105069a71cad61aa032bd4ec4466 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 378 404 1.5E-48 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SCD_RS04730 9a9b105069a71cad61aa032bd4ec4466 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 1.5E-48 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SCD_RS04730 9a9b105069a71cad61aa032bd4ec4466 493 PANTHER PTHR22773:SF40 1 488 6.1E-205 T 22-04-2016 SCD_RS04730 9a9b105069a71cad61aa032bd4ec4466 493 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 68 127 1.5E-5 T 22-04-2016 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692 SCD_RS04730 9a9b105069a71cad61aa032bd4ec4466 493 PANTHER PTHR22773 1 488 6.1E-205 T 22-04-2016 SCD_RS08565 c7dde6d78f3ad03942f3f549d0cde2b4 703 Gene3D G3DSA:3.40.50.410 517 690 1.0E-8 T 22-04-2016 IPR002035 von Willebrand factor, type A SCD_RS08565 c7dde6d78f3ad03942f3f549d0cde2b4 703 PANTHER PTHR41248 414 703 2.1E-49 T 22-04-2016 SCD_RS08565 c7dde6d78f3ad03942f3f549d0cde2b4 703 SUPERFAMILY SSF53300 518 701 2.97E-20 T 22-04-2016 IPR002035 von Willebrand factor, type A SCD_RS08565 c7dde6d78f3ad03942f3f549d0cde2b4 703 SMART SM00327 517 702 2.8E-17 T 22-04-2016 IPR002035 von Willebrand factor, type A SCD_RS08565 c7dde6d78f3ad03942f3f549d0cde2b4 703 PANTHER PTHR41248:SF1 414 703 2.1E-49 T 22-04-2016 SCD_RS02990 52b003a190aa122487be25ea1f546f6e 411 Gene3D G3DSA:1.20.810.10 9 406 5.6E-156 T 22-04-2016 IPR027387 Cytochrome b/b6-like domain SCD_RS02990 52b003a190aa122487be25ea1f546f6e 411 Pfam PF00033 Cytochrome b/b6/petB 26 214 6.1E-67 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SCD_RS02990 52b003a190aa122487be25ea1f546f6e 411 PANTHER PTHR19271 4 409 5.0E-227 T 22-04-2016 SCD_RS02990 52b003a190aa122487be25ea1f546f6e 411 SUPERFAMILY SSF81342 15 283 1.88E-97 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SCD_RS02990 52b003a190aa122487be25ea1f546f6e 411 PANTHER PTHR19271:SF9 4 409 5.0E-227 T 22-04-2016 SCD_RS02990 52b003a190aa122487be25ea1f546f6e 411 PIRSF PIRSF038885 1 411 1.8E-152 T 22-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 SCD_RS02990 52b003a190aa122487be25ea1f546f6e 411 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 281 387 4.9E-37 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 SCD_RS02990 52b003a190aa122487be25ea1f546f6e 411 SUPERFAMILY SSF81648 285 404 3.92E-26 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 SCD_RS14770 4e067cc2d2fea525c2145a4e105312f6 272 PANTHER PTHR30413:SF8 1 272 4.2E-73 T 22-04-2016 SCD_RS14770 4e067cc2d2fea525c2145a4e105312f6 272 PANTHER PTHR30413 1 272 4.2E-73 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SCD_RS14770 4e067cc2d2fea525c2145a4e105312f6 272 Pfam PF01061 ABC-2 type transporter 16 231 2.2E-20 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 SCD_RS15710 b62812d775ebf63ca061a7abe61840e7 476 SMART SM00471 291 428 5.2E-6 T 22-04-2016 IPR003607 HD/PDEase domain SCD_RS15710 b62812d775ebf63ca061a7abe61840e7 476 SUPERFAMILY SSF109604 273 457 3.45E-37 T 22-04-2016 SCD_RS15710 b62812d775ebf63ca061a7abe61840e7 476 Gene3D G3DSA:1.10.3210.10 278 461 9.5E-20 T 22-04-2016 IPR006674 HD domain SCD_RS15710 b62812d775ebf63ca061a7abe61840e7 476 Pfam PF01966 HD domain 296 418 1.8E-17 T 22-04-2016 IPR006674 HD domain SCD_RS13660 07799dad7643894c1e3c49f464fe207c 271 PANTHER PTHR10587 75 249 9.6E-39 T 22-04-2016 SCD_RS13660 07799dad7643894c1e3c49f464fe207c 271 SUPERFAMILY SSF88713 47 267 1.53E-51 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SCD_RS13660 07799dad7643894c1e3c49f464fe207c 271 Gene3D G3DSA:3.20.20.370 74 267 4.0E-48 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SCD_RS13660 07799dad7643894c1e3c49f464fe207c 271 Pfam PF01522 Polysaccharide deacetylase 75 195 1.3E-26 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SCD_RS02200 cb7a76872ab22459356cb3f66415ff15 139 SUPERFAMILY SSF46785 3 134 4.48E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS02200 cb7a76872ab22459356cb3f66415ff15 139 Pfam PF02082 Transcriptional regulator 1 81 4.9E-24 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type SCD_RS02200 cb7a76872ab22459356cb3f66415ff15 139 PANTHER PTHR33221 2 139 1.9E-57 T 22-04-2016 SCD_RS02200 cb7a76872ab22459356cb3f66415ff15 139 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 48 66 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site SCD_RS02200 cb7a76872ab22459356cb3f66415ff15 139 PANTHER PTHR33221:SF4 2 139 1.9E-57 T 22-04-2016 SCD_RS02200 cb7a76872ab22459356cb3f66415ff15 139 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 1.3E-35 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type SCD_RS02200 cb7a76872ab22459356cb3f66415ff15 139 Gene3D G3DSA:1.10.10.10 1 136 6.1E-47 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS02285 86c10bba2ed4f43eec164a23c88b121d 85 Gene3D G3DSA:3.30.110.40 3 73 1.3E-7 T 22-04-2016 IPR001455 TusA-like domain SCD_RS02285 86c10bba2ed4f43eec164a23c88b121d 85 SUPERFAMILY SSF64307 5 72 1.83E-10 T 22-04-2016 IPR001455 TusA-like domain SCD_RS02285 86c10bba2ed4f43eec164a23c88b121d 85 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 6 72 4.6E-17 T 22-04-2016 IPR018720 Domain of unknown function DUF2249 SCD_RS14775 d4fa1f48064a51eca808ba796aa7cb31 438 SMART SM00710 95 119 390.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SCD_RS14775 d4fa1f48064a51eca808ba796aa7cb31 438 SMART SM00710 180 202 9000.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SCD_RS14775 d4fa1f48064a51eca808ba796aa7cb31 438 SMART SM00710 277 299 580.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SCD_RS14775 d4fa1f48064a51eca808ba796aa7cb31 438 SMART SM00710 152 173 24.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SCD_RS14775 d4fa1f48064a51eca808ba796aa7cb31 438 SMART SM00710 124 150 2200.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SCD_RS14775 d4fa1f48064a51eca808ba796aa7cb31 438 Pfam PF13229 Right handed beta helix region 90 230 5.5E-6 T 22-04-2016 SCD_RS14775 d4fa1f48064a51eca808ba796aa7cb31 438 SUPERFAMILY SSF51126 13 324 1.91E-23 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor SCD_RS14775 d4fa1f48064a51eca808ba796aa7cb31 438 Gene3D G3DSA:2.160.20.10 27 323 1.5E-17 T 22-04-2016 IPR012334 Pectin lyase fold SCD_RS04410 2c49e72c6710d129f15e3d1b08913c09 229 Gene3D G3DSA:3.30.70.1070 154 224 1.0E-14 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SCD_RS04410 2c49e72c6710d129f15e3d1b08913c09 229 Pfam PF05036 Sporulation related domain 153 224 1.2E-16 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SCD_RS04410 2c49e72c6710d129f15e3d1b08913c09 229 SUPERFAMILY SSF110997 154 224 6.93E-15 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SCD_RS09965 8e13e62f16246dc7f5e19a5c2e48d346 449 PANTHER PTHR33567 15 449 7.8E-102 T 22-04-2016 SCD_RS09965 8e13e62f16246dc7f5e19a5c2e48d346 449 PANTHER PTHR33567:SF1 15 449 7.8E-102 T 22-04-2016 SCD_RS09965 8e13e62f16246dc7f5e19a5c2e48d346 449 TIGRFAM TIGR00937 2A51: chromate efflux transporter 23 400 1.5E-74 T 22-04-2016 IPR014047 Chromate transporter, long chain SCD_RS09965 8e13e62f16246dc7f5e19a5c2e48d346 449 PIRSF PIRSF004810 1 447 4.1E-126 T 22-04-2016 IPR014047 Chromate transporter, long chain SCD_RS09965 8e13e62f16246dc7f5e19a5c2e48d346 449 Pfam PF02417 Chromate transporter 16 180 2.1E-35 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 SCD_RS09965 8e13e62f16246dc7f5e19a5c2e48d346 449 Pfam PF02417 Chromate transporter 252 441 5.5E-32 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 SCD_RS06790 a6f99cfb1232e03bafbbe19f20ec602d 268 SUPERFAMILY SSF53335 24 255 1.98E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS06790 a6f99cfb1232e03bafbbe19f20ec602d 268 Gene3D G3DSA:3.40.50.150 35 167 1.7E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS06790 a6f99cfb1232e03bafbbe19f20ec602d 268 PANTHER PTHR10108 36 260 1.3E-32 T 22-04-2016 SCD_RS06790 a6f99cfb1232e03bafbbe19f20ec602d 268 PANTHER PTHR10108:SF848 36 260 1.3E-32 T 22-04-2016 SCD_RS06790 a6f99cfb1232e03bafbbe19f20ec602d 268 Pfam PF08241 Methyltransferase domain 49 145 1.7E-22 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SCD_RS11915 0e056c7d085726819b3275c92edad0f0 156 Pfam PF13501 Sulfur oxidation protein SoxY 60 154 3.9E-32 T 22-04-2016 IPR032711 Ig-like SoxY domain SCD_RS11915 0e056c7d085726819b3275c92edad0f0 156 PIRSF PIRSF010312 1 156 1.3E-44 T 22-04-2016 IPR016568 Sulphur oxidation, SoxY SCD_RS11915 0e056c7d085726819b3275c92edad0f0 156 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 5 156 4.9E-51 T 22-04-2016 IPR016568 Sulphur oxidation, SoxY SCD_RS14590 7744b29346ee88109fb4f691441d8aa7 374 Pfam PF13286 Phosphohydrolase-associated domain 281 367 2.0E-30 T 22-04-2016 IPR026875 Phosphohydrolase-associated domain SCD_RS14590 7744b29346ee88109fb4f691441d8aa7 374 Pfam PF01966 HD domain 65 195 2.0E-15 T 22-04-2016 IPR006674 HD domain SCD_RS14590 7744b29346ee88109fb4f691441d8aa7 374 Gene3D G3DSA:1.10.3210.10 27 214 5.1E-86 T 22-04-2016 IPR006674 HD domain SCD_RS14590 7744b29346ee88109fb4f691441d8aa7 374 Gene3D G3DSA:1.10.3210.10 271 370 5.1E-86 T 22-04-2016 IPR006674 HD domain SCD_RS14590 7744b29346ee88109fb4f691441d8aa7 374 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 5 369 39.65 T 22-04-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 SCD_RS14590 7744b29346ee88109fb4f691441d8aa7 374 SMART SM00471 61 205 1.0E-12 T 22-04-2016 IPR003607 HD/PDEase domain SCD_RS14590 7744b29346ee88109fb4f691441d8aa7 374 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 28 370 1.1E-93 T 22-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 SCD_RS14590 7744b29346ee88109fb4f691441d8aa7 374 PANTHER PTHR11373:SF25 1 373 6.6E-83 T 22-04-2016 SCD_RS14590 7744b29346ee88109fb4f691441d8aa7 374 PANTHER PTHR11373 1 373 6.6E-83 T 22-04-2016 SCD_RS14590 7744b29346ee88109fb4f691441d8aa7 374 SUPERFAMILY SSF109604 16 370 1.97E-98 T 22-04-2016 SCD_RS00105 47c1eb1cd037b94042123649f7a52fb0 480 Gene3D G3DSA:3.30.70.100 385 456 5.0E-5 T 22-04-2016 SCD_RS00105 47c1eb1cd037b94042123649f7a52fb0 480 SUPERFAMILY SSF50182 306 371 7.19E-15 T 22-04-2016 IPR010920 LSM domain SCD_RS00105 47c1eb1cd037b94042123649f7a52fb0 480 Pfam PF00924 Mechanosensitive ion channel 268 458 1.4E-33 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SCD_RS00105 47c1eb1cd037b94042123649f7a52fb0 480 Gene3D G3DSA:2.30.30.60 321 370 2.9E-9 T 22-04-2016 SCD_RS00105 47c1eb1cd037b94042123649f7a52fb0 480 PANTHER PTHR30566:SF10 213 474 8.4E-88 T 22-04-2016 SCD_RS00105 47c1eb1cd037b94042123649f7a52fb0 480 SUPERFAMILY SSF82689 382 457 8.89E-5 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SCD_RS00105 47c1eb1cd037b94042123649f7a52fb0 480 PANTHER PTHR30566 213 474 8.4E-88 T 22-04-2016 SCD_RS05255 7f305ee233e19fac7ed0f23a40e4ff44 98 Gene3D G3DSA:1.10.260.40 11 55 1.1E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SCD_RS05255 7f305ee233e19fac7ed0f23a40e4ff44 98 SUPERFAMILY SSF47413 11 62 3.07E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SCD_RS02345 03b2f906c8893145126e710a609eb5b0 220 PANTHER PTHR26402:SF279 1 218 1.1E-100 T 22-04-2016 SCD_RS02345 03b2f906c8893145126e710a609eb5b0 220 SMART SM00448 1 112 1.1E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS02345 03b2f906c8893145126e710a609eb5b0 220 Pfam PF00072 Response regulator receiver domain 3 112 5.6E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS02345 03b2f906c8893145126e710a609eb5b0 220 SUPERFAMILY SSF52172 1 169 1.28E-35 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS02345 03b2f906c8893145126e710a609eb5b0 220 PANTHER PTHR26402 1 218 1.1E-100 T 22-04-2016 SCD_RS02345 03b2f906c8893145126e710a609eb5b0 220 SMART SM00862 145 216 3.5E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SCD_RS02345 03b2f906c8893145126e710a609eb5b0 220 Gene3D G3DSA:1.10.10.10 124 217 4.0E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS02345 03b2f906c8893145126e710a609eb5b0 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 215 8.6E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SCD_RS02345 03b2f906c8893145126e710a609eb5b0 220 Gene3D G3DSA:3.40.50.2300 1 120 4.2E-36 T 22-04-2016 SCD_RS09080 e72fa5be621089e827f1e331425bc299 239 SMART SM00862 156 232 2.5E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SCD_RS09080 e72fa5be621089e827f1e331425bc299 239 SMART SM00448 5 116 1.1E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS09080 e72fa5be621089e827f1e331425bc299 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 6.9E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SCD_RS09080 e72fa5be621089e827f1e331425bc299 239 PANTHER PTHR26402 5 235 5.9E-99 T 22-04-2016 SCD_RS09080 e72fa5be621089e827f1e331425bc299 239 Pfam PF00072 Response regulator receiver domain 7 117 2.3E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS09080 e72fa5be621089e827f1e331425bc299 239 PANTHER PTHR26402:SF292 5 235 5.9E-99 T 22-04-2016 SCD_RS09080 e72fa5be621089e827f1e331425bc299 239 Gene3D G3DSA:1.10.10.10 135 235 7.4E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS09080 e72fa5be621089e827f1e331425bc299 239 Gene3D G3DSA:3.40.50.2300 4 124 9.5E-41 T 22-04-2016 SCD_RS09080 e72fa5be621089e827f1e331425bc299 239 SUPERFAMILY SSF46894 133 234 1.02E-28 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SCD_RS09080 e72fa5be621089e827f1e331425bc299 239 SUPERFAMILY SSF52172 3 126 4.13E-41 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS04470 c6fb27006bcc9e8e9034c69e5d9cbdb0 463 SUPERFAMILY SSF52374 1 313 9.73E-100 T 22-04-2016 SCD_RS04470 c6fb27006bcc9e8e9034c69e5d9cbdb0 463 Gene3D G3DSA:3.40.50.620 19 305 1.7E-109 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS04470 c6fb27006bcc9e8e9034c69e5d9cbdb0 463 SMART SM00840 349 404 1.4E-23 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 SCD_RS04470 c6fb27006bcc9e8e9034c69e5d9cbdb0 463 Gene3D G3DSA:1.20.120.640 307 394 2.5E-22 T 22-04-2016 SCD_RS04470 c6fb27006bcc9e8e9034c69e5d9cbdb0 463 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 463 38.546 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 SCD_RS04470 c6fb27006bcc9e8e9034c69e5d9cbdb0 463 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 462 2.8E-174 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 SCD_RS04470 c6fb27006bcc9e8e9034c69e5d9cbdb0 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 5.8E-31 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SCD_RS04470 c6fb27006bcc9e8e9034c69e5d9cbdb0 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 5.8E-31 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SCD_RS04470 c6fb27006bcc9e8e9034c69e5d9cbdb0 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 5.8E-31 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SCD_RS04470 c6fb27006bcc9e8e9034c69e5d9cbdb0 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 5.8E-31 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SCD_RS04470 c6fb27006bcc9e8e9034c69e5d9cbdb0 463 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 17 313 7.3E-132 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 SCD_RS04470 c6fb27006bcc9e8e9034c69e5d9cbdb0 463 PANTHER PTHR10890 1 463 2.6E-236 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SCD_RS04470 c6fb27006bcc9e8e9034c69e5d9cbdb0 463 Pfam PF09190 DALR domain 349 404 1.2E-18 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 SCD_RS04470 c6fb27006bcc9e8e9034c69e5d9cbdb0 463 SUPERFAMILY SSF47323 316 462 5.62E-38 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS07620 2c04d28a1a80fc2f06d0e7c2acc91e4e 472 PANTHER PTHR18866 1 472 7.1E-282 T 22-04-2016 SCD_RS07620 2c04d28a1a80fc2f06d0e7c2acc91e4e 472 Gene3D G3DSA:3.30.1490.20 129 200 1.1E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SCD_RS07620 2c04d28a1a80fc2f06d0e7c2acc91e4e 472 SUPERFAMILY SSF51246 330 446 1.99E-43 T 22-04-2016 IPR011054 Rudiment single hybrid motif SCD_RS07620 2c04d28a1a80fc2f06d0e7c2acc91e4e 472 SUPERFAMILY SSF56059 82 347 1.94E-66 T 22-04-2016 SCD_RS07620 2c04d28a1a80fc2f06d0e7c2acc91e4e 472 Gene3D G3DSA:3.40.50.20 2 128 9.2E-51 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SCD_RS07620 2c04d28a1a80fc2f06d0e7c2acc91e4e 472 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 2 444 3.5E-193 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 SCD_RS07620 2c04d28a1a80fc2f06d0e7c2acc91e4e 472 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SCD_RS07620 2c04d28a1a80fc2f06d0e7c2acc91e4e 472 SMART SM00878 335 441 4.8E-62 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal SCD_RS07620 2c04d28a1a80fc2f06d0e7c2acc91e4e 472 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SCD_RS07620 2c04d28a1a80fc2f06d0e7c2acc91e4e 472 Pfam PF02785 Biotin carboxylase C-terminal domain 335 441 9.1E-40 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal SCD_RS07620 2c04d28a1a80fc2f06d0e7c2acc91e4e 472 SUPERFAMILY SSF52440 1 112 1.15E-44 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SCD_RS07620 2c04d28a1a80fc2f06d0e7c2acc91e4e 472 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 109 5.5E-43 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain SCD_RS07620 2c04d28a1a80fc2f06d0e7c2acc91e4e 472 Gene3D G3DSA:3.30.470.20 204 446 1.7E-96 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SCD_RS07620 2c04d28a1a80fc2f06d0e7c2acc91e4e 472 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 114 321 9.2E-76 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SCD_RS14090 60372bee514484261cfb4c63667ae0c9 304 Gene3D G3DSA:3.40.190.10 178 264 1.7E-26 T 22-04-2016 SCD_RS14090 60372bee514484261cfb4c63667ae0c9 304 SUPERFAMILY SSF53850 93 298 6.2E-47 T 22-04-2016 SCD_RS14090 60372bee514484261cfb4c63667ae0c9 304 Pfam PF03466 LysR substrate binding domain 92 295 2.6E-52 T 22-04-2016 IPR005119 LysR, substrate-binding SCD_RS14090 60372bee514484261cfb4c63667ae0c9 304 Gene3D G3DSA:1.10.10.10 4 89 2.0E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS14090 60372bee514484261cfb4c63667ae0c9 304 PANTHER PTHR30126 3 304 3.7E-122 T 22-04-2016 SCD_RS14090 60372bee514484261cfb4c63667ae0c9 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.1E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SCD_RS14090 60372bee514484261cfb4c63667ae0c9 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.1E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SCD_RS14090 60372bee514484261cfb4c63667ae0c9 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.1E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SCD_RS14090 60372bee514484261cfb4c63667ae0c9 304 PANTHER PTHR30126:SF5 3 304 3.7E-122 T 22-04-2016 SCD_RS14090 60372bee514484261cfb4c63667ae0c9 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 4.4E-23 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SCD_RS14090 60372bee514484261cfb4c63667ae0c9 304 SUPERFAMILY SSF46785 2 85 4.76E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS14090 60372bee514484261cfb4c63667ae0c9 304 Gene3D G3DSA:3.40.190.10 93 177 1.6E-19 T 22-04-2016 SCD_RS02230 d62725b9b278c7baa4a8fd1b0db5a1fe 100 PANTHER PTHR13696 4 94 6.7E-18 T 22-04-2016 SCD_RS02230 d62725b9b278c7baa4a8fd1b0db5a1fe 100 SUPERFAMILY SSF117916 1 99 7.85E-30 T 22-04-2016 SCD_RS02230 d62725b9b278c7baa4a8fd1b0db5a1fe 100 PANTHER PTHR13696:SF62 4 94 6.7E-18 T 22-04-2016 SCD_RS02230 d62725b9b278c7baa4a8fd1b0db5a1fe 100 Pfam PF01883 Domain of unknown function DUF59 5 74 1.9E-20 T 22-04-2016 IPR002744 Domain of unknown function DUF59 SCD_RS12570 e855825531b26bc637954eccbd73f5cb 222 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 143 219 1.1E-22 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SCD_RS12570 e855825531b26bc637954eccbd73f5cb 222 PRINTS PR01374 Gram-negative bacterial tonB protein signature 158 176 1.2E-5 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SCD_RS12570 e855825531b26bc637954eccbd73f5cb 222 PRINTS PR01374 Gram-negative bacterial tonB protein signature 67 77 1.2E-5 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SCD_RS12570 e855825531b26bc637954eccbd73f5cb 222 PRINTS PR01374 Gram-negative bacterial tonB protein signature 137 158 1.2E-5 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SCD_RS12570 e855825531b26bc637954eccbd73f5cb 222 Gene3D G3DSA:3.30.1150.10 116 221 2.2E-17 T 22-04-2016 SCD_RS12570 e855825531b26bc637954eccbd73f5cb 222 SUPERFAMILY SSF74653 136 217 2.09E-23 T 22-04-2016 SCD_RS12570 e855825531b26bc637954eccbd73f5cb 222 PANTHER PTHR33446 58 221 1.4E-16 T 22-04-2016 SCD_RS12570 e855825531b26bc637954eccbd73f5cb 222 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 141 219 5.6E-23 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SCD_RS12570 e855825531b26bc637954eccbd73f5cb 222 PANTHER PTHR33446:SF2 58 221 1.4E-16 T 22-04-2016 SCD_RS14270 76483d82e0dc84f25f3d9f47224357b5 379 Gene3D G3DSA:3.90.1150.10 252 375 3.7E-19 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS14270 76483d82e0dc84f25f3d9f47224357b5 379 PANTHER PTHR30244 1 379 2.3E-171 T 22-04-2016 SCD_RS14270 76483d82e0dc84f25f3d9f47224357b5 379 SUPERFAMILY SSF53383 3 375 1.21E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS14270 76483d82e0dc84f25f3d9f47224357b5 379 PIRSF PIRSF000390 1 377 5.2E-104 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SCD_RS14270 76483d82e0dc84f25f3d9f47224357b5 379 PANTHER PTHR30244:SF14 1 379 2.3E-171 T 22-04-2016 SCD_RS14270 76483d82e0dc84f25f3d9f47224357b5 379 Gene3D G3DSA:3.40.640.10 4 249 3.9E-75 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS14270 76483d82e0dc84f25f3d9f47224357b5 379 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 19 370 3.0E-87 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SCD_RS14270 76483d82e0dc84f25f3d9f47224357b5 379 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 4 374 1.2E-188 T 22-04-2016 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315|UniPathway: UPA00566 SCD_RS04575 1c7751f6f58217ec049d6c147701bc39 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 9.6E-56 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 SCD_RS04575 1c7751f6f58217ec049d6c147701bc39 158 Gene3D G3DSA:3.10.50.30 82 157 1.2E-30 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SCD_RS04575 1c7751f6f58217ec049d6c147701bc39 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SCD_RS04575 1c7751f6f58217ec049d6c147701bc39 158 PIRSF PIRSF006092 1 158 1.1E-52 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 SCD_RS04575 1c7751f6f58217ec049d6c147701bc39 158 PANTHER PTHR30437 1 157 9.2E-64 T 22-04-2016 SCD_RS04575 1c7751f6f58217ec049d6c147701bc39 158 Gene3D G3DSA:1.10.287.180 1 75 2.4E-34 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SCD_RS04575 1c7751f6f58217ec049d6c147701bc39 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 157 1.9E-27 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SCD_RS04575 1c7751f6f58217ec049d6c147701bc39 158 SUPERFAMILY SSF54534 83 157 2.75E-23 T 22-04-2016 SCD_RS04575 1c7751f6f58217ec049d6c147701bc39 158 SUPERFAMILY SSF46557 3 77 1.31E-27 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SCD_RS04575 1c7751f6f58217ec049d6c147701bc39 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SCD_RS04575 1c7751f6f58217ec049d6c147701bc39 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 32.635 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 SCD_RS04575 1c7751f6f58217ec049d6c147701bc39 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 1.4E-31 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SCD_RS09430 792ae84c42e1482ba1c5fe0edbba38db 362 Pfam PF13484 4Fe-4S double cluster binding domain 200 264 2.3E-19 T 22-04-2016 SCD_RS09430 792ae84c42e1482ba1c5fe0edbba38db 362 Gene3D G3DSA:3.30.70.20 197 272 3.3E-7 T 22-04-2016 SCD_RS09430 792ae84c42e1482ba1c5fe0edbba38db 362 PANTHER PTHR30002 9 361 2.1E-170 T 22-04-2016 SCD_RS09430 792ae84c42e1482ba1c5fe0edbba38db 362 SUPERFAMILY SSF54862 177 323 3.98E-18 T 22-04-2016 SCD_RS09430 792ae84c42e1482ba1c5fe0edbba38db 362 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 14 323 49.733 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 SCD_RS09430 792ae84c42e1482ba1c5fe0edbba38db 362 Pfam PF08331 Domain of unknown function (DUF1730) 69 148 3.4E-22 T 22-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 SCD_RS09430 792ae84c42e1482ba1c5fe0edbba38db 362 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 201 212 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS09430 792ae84c42e1482ba1c5fe0edbba38db 362 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 21 357 1.0E-149 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 SCD_RS09430 792ae84c42e1482ba1c5fe0edbba38db 362 PANTHER PTHR30002:SF4 9 361 2.1E-170 T 22-04-2016 SCD_RS08005 b13599da1afe1e85f6fb89997ea0007e 240 PANTHER PTHR13610:SF9 67 235 1.4E-14 T 22-04-2016 SCD_RS08005 b13599da1afe1e85f6fb89997ea0007e 240 Gene3D G3DSA:3.40.50.150 99 221 7.5E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS08005 b13599da1afe1e85f6fb89997ea0007e 240 SUPERFAMILY SSF53335 81 232 4.07E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS08005 b13599da1afe1e85f6fb89997ea0007e 240 PANTHER PTHR13610 67 235 1.4E-14 T 22-04-2016 IPR026170 FAM173 family SCD_RS07790 3ea95cf604ccad5d364e99c3c888dfe4 399 Pfam PF01370 NAD dependent epimerase/dehydratase family 18 80 1.7E-4 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SCD_RS07790 3ea95cf604ccad5d364e99c3c888dfe4 399 PANTHER PTHR11609:SF7 1 390 6.4E-198 T 22-04-2016 SCD_RS07790 3ea95cf604ccad5d364e99c3c888dfe4 399 SUPERFAMILY SSF52440 3 112 7.48E-32 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SCD_RS07790 3ea95cf604ccad5d364e99c3c888dfe4 399 PANTHER PTHR11609 1 390 6.4E-198 T 22-04-2016 SCD_RS07790 3ea95cf604ccad5d364e99c3c888dfe4 399 SUPERFAMILY SSF56059 113 319 1.77E-53 T 22-04-2016 SCD_RS07790 3ea95cf604ccad5d364e99c3c888dfe4 399 Pfam PF02222 ATP-grasp domain 123 300 3.6E-50 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 SCD_RS07790 3ea95cf604ccad5d364e99c3c888dfe4 399 Gene3D G3DSA:3.40.50.20 4 120 3.3E-38 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SCD_RS07790 3ea95cf604ccad5d364e99c3c888dfe4 399 Gene3D G3DSA:3.30.1490.20 124 199 2.6E-24 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SCD_RS07790 3ea95cf604ccad5d364e99c3c888dfe4 399 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 13 395 1.3E-174 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 SCD_RS07790 3ea95cf604ccad5d364e99c3c888dfe4 399 Gene3D G3DSA:3.30.470.20 200 394 2.2E-69 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SCD_RS07790 3ea95cf604ccad5d364e99c3c888dfe4 399 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 7 397 51.349 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 SCD_RS07790 3ea95cf604ccad5d364e99c3c888dfe4 399 SUPERFAMILY SSF51246 325 395 1.88E-17 T 22-04-2016 IPR011054 Rudiment single hybrid motif SCD_RS07630 954b4755f64c8b024ec3e0b2ff57beca 191 Pfam PF02545 Maf-like protein 2 185 9.8E-46 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 SCD_RS07630 954b4755f64c8b024ec3e0b2ff57beca 191 SUPERFAMILY SSF52972 2 184 3.47E-57 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SCD_RS07630 954b4755f64c8b024ec3e0b2ff57beca 191 PANTHER PTHR11746:SF102 120 188 4.4E-28 T 22-04-2016 SCD_RS07630 954b4755f64c8b024ec3e0b2ff57beca 191 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 183 1.2E-49 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 SCD_RS07630 954b4755f64c8b024ec3e0b2ff57beca 191 Hamap MF_00528 Septum formation protein Maf [maf]. 2 190 29.6 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 SCD_RS07630 954b4755f64c8b024ec3e0b2ff57beca 191 PIRSF PIRSF006305 1 191 7.2E-43 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 SCD_RS07630 954b4755f64c8b024ec3e0b2ff57beca 191 PANTHER PTHR11746 120 188 4.4E-28 T 22-04-2016 SCD_RS07630 954b4755f64c8b024ec3e0b2ff57beca 191 Gene3D G3DSA:3.90.950.10 2 188 2.9E-56 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SCD_RS00560 67e4a74a77e12fefa7e8b768ce9cdbd2 814 PANTHER PTHR32305:SF6 73 151 8.4E-12 T 22-04-2016 SCD_RS00560 67e4a74a77e12fefa7e8b768ce9cdbd2 814 PANTHER PTHR32305:SF6 446 707 8.4E-12 T 22-04-2016 SCD_RS00560 67e4a74a77e12fefa7e8b768ce9cdbd2 814 PANTHER PTHR32305:SF6 336 420 8.4E-12 T 22-04-2016 SCD_RS00560 67e4a74a77e12fefa7e8b768ce9cdbd2 814 Gene3D G3DSA:1.10.1330.10 749 812 9.1E-11 T 22-04-2016 IPR016134 Dockerin domain GO:0000272 SCD_RS00560 67e4a74a77e12fefa7e8b768ce9cdbd2 814 SUPERFAMILY SSF63446 750 810 6.67E-8 T 22-04-2016 IPR016134 Dockerin domain GO:0000272 SCD_RS00560 67e4a74a77e12fefa7e8b768ce9cdbd2 814 PANTHER PTHR32305 73 151 8.4E-12 T 22-04-2016 SCD_RS00560 67e4a74a77e12fefa7e8b768ce9cdbd2 814 PANTHER PTHR32305 446 707 8.4E-12 T 22-04-2016 SCD_RS00560 67e4a74a77e12fefa7e8b768ce9cdbd2 814 PANTHER PTHR32305 336 420 8.4E-12 T 22-04-2016 SCD_RS00560 67e4a74a77e12fefa7e8b768ce9cdbd2 814 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 572 605 5.0E-6 T 22-04-2016 IPR006530 YD repeat SCD_RS00560 67e4a74a77e12fefa7e8b768ce9cdbd2 814 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 625 660 1.1E-4 T 22-04-2016 IPR006530 YD repeat SCD_RS00560 67e4a74a77e12fefa7e8b768ce9cdbd2 814 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 382 422 4.4E-6 T 22-04-2016 IPR006530 YD repeat SCD_RS00560 67e4a74a77e12fefa7e8b768ce9cdbd2 814 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 666 704 2.5E-5 T 22-04-2016 IPR006530 YD repeat SCD_RS00560 67e4a74a77e12fefa7e8b768ce9cdbd2 814 Pfam PF05593 RHS Repeat 572 607 1.0E-9 T 22-04-2016 IPR031325 RHS repeat SCD_RS00560 67e4a74a77e12fefa7e8b768ce9cdbd2 814 Pfam PF05593 RHS Repeat 626 653 8.3E-5 T 22-04-2016 IPR031325 RHS repeat SCD_RS00560 67e4a74a77e12fefa7e8b768ce9cdbd2 814 Pfam PF05593 RHS Repeat 382 416 1.3E-7 T 22-04-2016 IPR031325 RHS repeat SCD_RS00560 67e4a74a77e12fefa7e8b768ce9cdbd2 814 Pfam PF05593 RHS Repeat 342 396 3.8E-5 T 22-04-2016 IPR031325 RHS repeat SCD_RS00545 515ffd40e8f6ea223bd1ee745e49c905 195 Pfam PF08238 Sel1 repeat 43 77 3.6E-6 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS00545 515ffd40e8f6ea223bd1ee745e49c905 195 Pfam PF08238 Sel1 repeat 111 145 1.8E-8 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS00545 515ffd40e8f6ea223bd1ee745e49c905 195 SUPERFAMILY SSF81901 14 153 4.05E-30 T 22-04-2016 SCD_RS00545 515ffd40e8f6ea223bd1ee745e49c905 195 SMART SM00671 42 77 5.0E-7 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS00545 515ffd40e8f6ea223bd1ee745e49c905 195 SMART SM00671 110 145 7.5E-9 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS00545 515ffd40e8f6ea223bd1ee745e49c905 195 SMART SM00671 78 109 71.0 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS00545 515ffd40e8f6ea223bd1ee745e49c905 195 PANTHER PTHR11102 20 156 2.1E-24 T 22-04-2016 SCD_RS00545 515ffd40e8f6ea223bd1ee745e49c905 195 Gene3D G3DSA:1.25.40.10 12 158 6.2E-32 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS07060 bfdda2b3f372b1674a5400caf904daaa 327 PANTHER PTHR11935:SF5 66 287 1.4E-30 T 22-04-2016 SCD_RS07060 bfdda2b3f372b1674a5400caf904daaa 327 Pfam PF00753 Metallo-beta-lactamase superfamily 72 257 4.2E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS07060 bfdda2b3f372b1674a5400caf904daaa 327 PANTHER PTHR11935 66 287 1.4E-30 T 22-04-2016 SCD_RS07060 bfdda2b3f372b1674a5400caf904daaa 327 SUPERFAMILY SSF56281 25 301 6.16E-52 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS07060 bfdda2b3f372b1674a5400caf904daaa 327 Gene3D G3DSA:3.60.15.10 44 278 1.3E-49 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS07060 bfdda2b3f372b1674a5400caf904daaa 327 SMART SM00849 72 257 3.1E-22 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS01275 a9b137ad1cacc4e6c627d993024e3347 824 SMART SM00491 329 468 6.1E-4 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 SCD_RS01275 a9b137ad1cacc4e6c627d993024e3347 824 SUPERFAMILY SSF52540 30 160 4.32E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS01275 a9b137ad1cacc4e6c627d993024e3347 824 SMART SM00487 31 202 6.4E-4 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SCD_RS01275 a9b137ad1cacc4e6c627d993024e3347 824 Gene3D G3DSA:3.40.50.300 30 158 9.7E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00040 bdf80680e2d08d1c03cfa57ae4735152 362 Gene3D G3DSA:3.40.50.450 114 258 2.1E-10 T 22-04-2016 SCD_RS00040 bdf80680e2d08d1c03cfa57ae4735152 362 PANTHER PTHR32039 58 360 9.5E-107 T 22-04-2016 SCD_RS00040 bdf80680e2d08d1c03cfa57ae4735152 362 Pfam PF02481 DNA recombination-mediator protein A 74 279 6.5E-77 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 SCD_RS00040 bdf80680e2d08d1c03cfa57ae4735152 362 SUPERFAMILY SSF47781 6 60 3.15E-6 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SCD_RS00040 bdf80680e2d08d1c03cfa57ae4735152 362 PANTHER PTHR32039:SF8 58 360 9.5E-107 T 22-04-2016 SCD_RS00040 bdf80680e2d08d1c03cfa57ae4735152 362 SUPERFAMILY SSF102405 82 288 3.89E-42 T 22-04-2016 SCD_RS00040 bdf80680e2d08d1c03cfa57ae4735152 362 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 72 288 2.0E-79 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 SCD_RS00040 bdf80680e2d08d1c03cfa57ae4735152 362 Gene3D G3DSA:1.10.150.20 13 59 4.0E-7 T 22-04-2016 SCD_RS08670 0d3ecfc31b714e29927c091e3fca51a6 387 PIRSF PIRSF000390 12 386 8.5E-105 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SCD_RS08670 0d3ecfc31b714e29927c091e3fca51a6 387 SUPERFAMILY SSF53383 17 383 3.48E-107 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS08670 0d3ecfc31b714e29927c091e3fca51a6 387 Gene3D G3DSA:3.90.1150.10 258 384 5.8E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS08670 0d3ecfc31b714e29927c091e3fca51a6 387 Gene3D G3DSA:3.40.640.10 17 255 5.3E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS08670 0d3ecfc31b714e29927c091e3fca51a6 387 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 25 377 4.3E-113 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SCD_RS08670 0d3ecfc31b714e29927c091e3fca51a6 387 PANTHER PTHR30244 8 385 3.3E-126 T 22-04-2016 SCD_RS08670 0d3ecfc31b714e29927c091e3fca51a6 387 PANTHER PTHR30244:SF3 8 385 3.3E-126 T 22-04-2016 SCD_RS13390 8df6ee17fea65a33eeaab8f72ff7695d 395 Pfam PF03916 Polysulphide reductase, NrfD 42 332 1.9E-51 T 22-04-2016 IPR005614 NrfD family SCD_RS13390 8df6ee17fea65a33eeaab8f72ff7695d 395 PANTHER PTHR34856 5 382 2.9E-22 T 22-04-2016 SCD_RS13390 8df6ee17fea65a33eeaab8f72ff7695d 395 PANTHER PTHR34856:SF3 5 382 2.9E-22 T 22-04-2016 SCD_RS15945 969f69974c653b36233722e52b80ba9b 394 Gene3D G3DSA:3.40.50.2000 199 334 5.6E-16 T 22-04-2016 SCD_RS15945 969f69974c653b36233722e52b80ba9b 394 PANTHER PTHR12526 90 357 2.6E-20 T 22-04-2016 SCD_RS15945 969f69974c653b36233722e52b80ba9b 394 SUPERFAMILY SSF53756 86 356 6.28E-39 T 22-04-2016 SCD_RS15945 969f69974c653b36233722e52b80ba9b 394 Pfam PF00534 Glycosyl transferases group 1 200 336 7.2E-20 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SCD_RS03715 90c9d854b926fb14c8150a0635fdd2af 153 Pfam PF00692 dUTPase 21 151 2.3E-35 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 SCD_RS03715 90c9d854b926fb14c8150a0635fdd2af 153 PANTHER PTHR11241 9 152 6.0E-49 T 22-04-2016 SCD_RS03715 90c9d854b926fb14c8150a0635fdd2af 153 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 10 152 32.172 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 SCD_RS03715 90c9d854b926fb14c8150a0635fdd2af 153 Gene3D G3DSA:2.70.40.10 4 152 1.3E-51 T 22-04-2016 IPR029054 dUTPase-like SCD_RS03715 90c9d854b926fb14c8150a0635fdd2af 153 TIGRFAM TIGR00576 dut: dUTP diphosphatase 17 152 6.3E-46 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 SCD_RS03715 90c9d854b926fb14c8150a0635fdd2af 153 SUPERFAMILY SSF51283 11 152 7.85E-52 T 22-04-2016 IPR029054 dUTPase-like SCD_RS15490 062972280abc74f513de261c7c47c27c 391 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 6 384 9.1E-51 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SCD_RS15490 062972280abc74f513de261c7c47c27c 391 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 66 78 - T 22-04-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37 SCD_RS15490 062972280abc74f513de261c7c47c27c 391 Gene3D G3DSA:3.40.50.150 1 157 2.8E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS15490 062972280abc74f513de261c7c47c27c 391 Pfam PF00145 C-5 cytosine-specific DNA methylase 5 387 2.0E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS15490 062972280abc74f513de261c7c47c27c 391 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 369 387 - T 22-04-2016 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 SCD_RS15490 062972280abc74f513de261c7c47c27c 391 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 5 21 5.6E-15 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SCD_RS15490 062972280abc74f513de261c7c47c27c 391 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 150 163 5.6E-15 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SCD_RS15490 062972280abc74f513de261c7c47c27c 391 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 104 118 5.6E-15 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SCD_RS15490 062972280abc74f513de261c7c47c27c 391 Gene3D G3DSA:3.90.120.10 158 176 4.1E-30 T 22-04-2016 SCD_RS15490 062972280abc74f513de261c7c47c27c 391 Gene3D G3DSA:3.90.120.10 255 377 4.1E-30 T 22-04-2016 SCD_RS15490 062972280abc74f513de261c7c47c27c 391 PANTHER PTHR10629 1 386 1.2E-54 T 22-04-2016 SCD_RS15490 062972280abc74f513de261c7c47c27c 391 SUPERFAMILY SSF53335 5 170 3.42E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS15490 062972280abc74f513de261c7c47c27c 391 SUPERFAMILY SSF53335 303 390 3.42E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS15490 062972280abc74f513de261c7c47c27c 391 SUPERFAMILY SSF53335 231 238 3.42E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS08895 b414a4a432ce6f742eaaca6986a611d0 384 Gene3D G3DSA:3.30.930.10 19 315 5.6E-60 T 22-04-2016 SCD_RS08895 b414a4a432ce6f742eaaca6986a611d0 384 Pfam PF13393 Histidyl-tRNA synthetase 10 315 3.2E-113 T 22-04-2016 SCD_RS08895 b414a4a432ce6f742eaaca6986a611d0 384 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 11 319 3.8E-83 T 22-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 SCD_RS08895 b414a4a432ce6f742eaaca6986a611d0 384 SUPERFAMILY SSF55681 4 316 9.95E-56 T 22-04-2016 SCD_RS08895 b414a4a432ce6f742eaaca6986a611d0 384 PANTHER PTHR11476 10 316 1.9E-50 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 SCD_RS08895 b414a4a432ce6f742eaaca6986a611d0 384 PANTHER PTHR11476:SF5 10 316 1.9E-50 T 22-04-2016 SCD_RS08895 b414a4a432ce6f742eaaca6986a611d0 384 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 16 366 31.767 T 22-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 SCD_RS00415 105e01faaaa3ffedf228d02b24bd2c07 89 PANTHER PTHR33705:SF2 1 89 1.6E-40 T 22-04-2016 SCD_RS00415 105e01faaaa3ffedf228d02b24bd2c07 89 SUPERFAMILY SSF55594 1 87 6.8E-30 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SCD_RS00415 105e01faaaa3ffedf228d02b24bd2c07 89 PANTHER PTHR33705 1 89 1.6E-40 T 22-04-2016 SCD_RS00415 105e01faaaa3ffedf228d02b24bd2c07 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.3E-15 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SCD_RS00415 105e01faaaa3ffedf228d02b24bd2c07 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.3E-15 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SCD_RS00415 105e01faaaa3ffedf228d02b24bd2c07 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.3E-15 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SCD_RS00415 105e01faaaa3ffedf228d02b24bd2c07 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site SCD_RS00415 105e01faaaa3ffedf228d02b24bd2c07 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 4.9E-33 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SCD_RS00415 105e01faaaa3ffedf228d02b24bd2c07 89 Gene3D G3DSA:3.30.1340.10 1 87 2.7E-32 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SCD_RS00415 105e01faaaa3ffedf228d02b24bd2c07 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 3.5E-28 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SCD_RS00415 105e01faaaa3ffedf228d02b24bd2c07 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site SCD_RS08285 5517dd27ceb9ebe16febeaf8008e16a6 536 Gene3D G3DSA:3.40.109.10 73 223 2.4E-5 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SCD_RS08285 5517dd27ceb9ebe16febeaf8008e16a6 536 PANTHER PTHR23026:SF102 348 531 1.5E-82 T 22-04-2016 SCD_RS08285 5517dd27ceb9ebe16febeaf8008e16a6 536 PANTHER PTHR23026:SF102 100 121 1.5E-82 T 22-04-2016 SCD_RS08285 5517dd27ceb9ebe16febeaf8008e16a6 536 SUPERFAMILY SSF55469 421 522 2.09E-9 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SCD_RS08285 5517dd27ceb9ebe16febeaf8008e16a6 536 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 75 227 3.7E-23 T 22-04-2016 IPR020051 SagB-type dehydrogenase domain SCD_RS08285 5517dd27ceb9ebe16febeaf8008e16a6 536 SUPERFAMILY SSF55469 99 222 9.29E-8 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SCD_RS08285 5517dd27ceb9ebe16febeaf8008e16a6 536 Gene3D G3DSA:3.40.109.10 421 522 1.6E-8 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SCD_RS08285 5517dd27ceb9ebe16febeaf8008e16a6 536 PANTHER PTHR23026 348 531 1.5E-82 T 22-04-2016 SCD_RS08285 5517dd27ceb9ebe16febeaf8008e16a6 536 PANTHER PTHR23026 100 121 1.5E-82 T 22-04-2016 SCD_RS08880 cc6bc3ae1aceefc0eaca51f876bf44cb 756 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 50 693 3.8E-226 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 SCD_RS08880 cc6bc3ae1aceefc0eaca51f876bf44cb 756 SMART SM00316 612 695 1.5E-14 T 22-04-2016 IPR022967 RNA-binding domain, S1 SCD_RS08880 cc6bc3ae1aceefc0eaca51f876bf44cb 756 SMART SM00316 55 117 2.7 T 22-04-2016 IPR022967 RNA-binding domain, S1 SCD_RS08880 cc6bc3ae1aceefc0eaca51f876bf44cb 756 SUPERFAMILY SSF50249 195 611 4.4E-146 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS08880 cc6bc3ae1aceefc0eaca51f876bf44cb 756 PANTHER PTHR23355 1 753 5.2E-246 T 22-04-2016 SCD_RS08880 cc6bc3ae1aceefc0eaca51f876bf44cb 756 TIGRFAM TIGR02063 RNase_R: ribonuclease R 2 695 1.1E-263 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 SCD_RS08880 cc6bc3ae1aceefc0eaca51f876bf44cb 756 SUPERFAMILY SSF50249 42 122 2.49E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS08880 cc6bc3ae1aceefc0eaca51f876bf44cb 756 Hamap MF_01895 Ribonuclease R [rnr]. 14 695 56.787 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 SCD_RS08880 cc6bc3ae1aceefc0eaca51f876bf44cb 756 Gene3D G3DSA:2.40.50.140 61 121 3.7E-4 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS08880 cc6bc3ae1aceefc0eaca51f876bf44cb 756 Pfam PF00773 RNB domain 235 570 2.6E-108 T 22-04-2016 SCD_RS08880 cc6bc3ae1aceefc0eaca51f876bf44cb 756 SMART SM00955 235 571 1.6E-192 T 22-04-2016 SCD_RS08880 cc6bc3ae1aceefc0eaca51f876bf44cb 756 ProSitePatterns PS01175 Ribonuclease II family signature. 538 562 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site SCD_RS08880 cc6bc3ae1aceefc0eaca51f876bf44cb 756 Pfam PF00575 S1 RNA binding domain 611 692 8.4E-12 T 22-04-2016 IPR003029 S1 domain GO:0003676 SCD_RS08880 cc6bc3ae1aceefc0eaca51f876bf44cb 756 Gene3D G3DSA:2.40.50.140 614 696 8.0E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS08880 cc6bc3ae1aceefc0eaca51f876bf44cb 756 SUPERFAMILY SSF50249 113 212 6.43E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS08880 cc6bc3ae1aceefc0eaca51f876bf44cb 756 SMART SM00357 61 120 1.0E-15 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 SCD_RS08880 cc6bc3ae1aceefc0eaca51f876bf44cb 756 SUPERFAMILY SSF50249 612 692 2.09E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS08880 cc6bc3ae1aceefc0eaca51f876bf44cb 756 Pfam PF08206 Ribonuclease B OB domain 62 119 6.1E-24 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain SCD_RS08880 cc6bc3ae1aceefc0eaca51f876bf44cb 756 PANTHER PTHR23355:SF9 1 753 5.2E-246 T 22-04-2016 SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 SUPERFAMILY SSF82693 135 182 6.28E-24 T 22-04-2016 SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 SUPERFAMILY SSF82693 274 330 6.28E-24 T 22-04-2016 SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 Pfam PF00873 AcrB/AcrD/AcrF family 2 1025 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 4.2E-100 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 4.2E-100 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 4.2E-100 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 4.2E-100 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 4.2E-100 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 4.2E-100 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 4.2E-100 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 4.2E-100 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 4.2E-100 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 Gene3D G3DSA:3.30.2090.10 181 275 1.3E-26 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 SUPERFAMILY SSF82714 721 806 8.24E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 Gene3D G3DSA:3.30.70.1430 568 669 1.4E-39 T 22-04-2016 SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 Gene3D G3DSA:1.10.3850.10 279 499 4.5E-60 T 22-04-2016 SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 Gene3D G3DSA:1.10.3850.10 813 1026 2.8E-57 T 22-04-2016 SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 SUPERFAMILY SSF82866 806 1028 1.83E-44 T 22-04-2016 SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 Gene3D G3DSA:3.30.2090.10 721 805 1.1E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 SUPERFAMILY SSF82693 566 669 9.42E-34 T 22-04-2016 SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 PANTHER PTHR32063 1 1028 0.0 T 22-04-2016 SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1038 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 SUPERFAMILY SSF82866 297 497 1.1E-50 T 22-04-2016 SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 SUPERFAMILY SSF82693 39 133 2.49E-23 T 22-04-2016 SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 Gene3D G3DSA:3.30.70.1430 39 140 7.7E-29 T 22-04-2016 SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 SUPERFAMILY SSF82714 182 272 7.85E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SCD_RS08340 5eb086ccc47f8281f17abe16379d506d 1041 PANTHER PTHR32063:SF13 1 1028 0.0 T 22-04-2016 SCD_RS05565 5fdba735518e445be34f60693b4e0522 217 SUPERFAMILY SSF56784 2 214 1.07E-38 T 22-04-2016 IPR023214 HAD-like domain SCD_RS05565 5fdba735518e445be34f60693b4e0522 217 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 68 185 3.0E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SCD_RS05565 5fdba735518e445be34f60693b4e0522 217 PANTHER PTHR18901:SF7 1 216 6.2E-80 T 22-04-2016 SCD_RS05565 5fdba735518e445be34f60693b4e0522 217 PANTHER PTHR18901 1 216 6.2E-80 T 22-04-2016 SCD_RS05565 5fdba735518e445be34f60693b4e0522 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 186 2.3E-10 T 22-04-2016 IPR023214 HAD-like domain SCD_RS05565 5fdba735518e445be34f60693b4e0522 217 Gene3D G3DSA:3.40.50.1000 7 198 8.8E-25 T 22-04-2016 IPR023214 HAD-like domain SCD_RS05820 11d1f5c4d0b6a2a40a630ae262358edd 501 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 191 488 3.8E-112 T 22-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SCD_RS05820 11d1f5c4d0b6a2a40a630ae262358edd 501 Gene3D G3DSA:3.40.50.720 4 188 9.1E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS05820 11d1f5c4d0b6a2a40a630ae262358edd 501 PIRSF PIRSF000110 1 491 1.8E-168 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SCD_RS05820 11d1f5c4d0b6a2a40a630ae262358edd 501 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 189 8.5E-51 T 22-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SCD_RS05820 11d1f5c4d0b6a2a40a630ae262358edd 501 PANTHER PTHR23429 5 497 8.4E-200 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SCD_RS05820 11d1f5c4d0b6a2a40a630ae262358edd 501 SUPERFAMILY SSF51735 3 192 6.3E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS05820 11d1f5c4d0b6a2a40a630ae262358edd 501 Gene3D G3DSA:3.30.360.10 189 488 2.3E-117 T 22-04-2016 SCD_RS05820 11d1f5c4d0b6a2a40a630ae262358edd 501 SUPERFAMILY SSF55347 179 491 1.18E-112 T 22-04-2016 SCD_RS05820 11d1f5c4d0b6a2a40a630ae262358edd 501 PANTHER PTHR23429:SF0 5 497 8.4E-200 T 22-04-2016 SCD_RS05820 11d1f5c4d0b6a2a40a630ae262358edd 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 330 356 2.0E-44 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SCD_RS05820 11d1f5c4d0b6a2a40a630ae262358edd 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 239 255 2.0E-44 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SCD_RS05820 11d1f5c4d0b6a2a40a630ae262358edd 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 145 158 2.0E-44 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SCD_RS05820 11d1f5c4d0b6a2a40a630ae262358edd 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 221 238 2.0E-44 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SCD_RS05820 11d1f5c4d0b6a2a40a630ae262358edd 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 169 197 2.0E-44 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SCD_RS05820 11d1f5c4d0b6a2a40a630ae262358edd 501 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 489 76.038 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SCD_RS05820 11d1f5c4d0b6a2a40a630ae262358edd 501 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 6 489 2.6E-174 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SCD_RS00165 4b281db696fe6add19c93d44ae0e9d28 113 Pfam PF00034 Cytochrome c 26 113 5.6E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS00165 4b281db696fe6add19c93d44ae0e9d28 113 SUPERFAMILY SSF46626 2 113 3.35E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS00165 4b281db696fe6add19c93d44ae0e9d28 113 Gene3D G3DSA:1.10.760.10 24 113 2.6E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS00165 4b281db696fe6add19c93d44ae0e9d28 113 PRINTS PR00606 Class ID cytochrome C signature 27 40 3.1E-11 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 SCD_RS00165 4b281db696fe6add19c93d44ae0e9d28 113 PRINTS PR00606 Class ID cytochrome C signature 101 111 3.1E-11 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 SCD_RS00165 4b281db696fe6add19c93d44ae0e9d28 113 PRINTS PR00606 Class ID cytochrome C signature 42 55 3.1E-11 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 SCD_RS09005 89b5adfd1c152511385d43e53290baae 337 PANTHER PTHR33376 2 332 6.0E-142 T 22-04-2016 SCD_RS09005 89b5adfd1c152511385d43e53290baae 337 PIRSF PIRSF006470 1 329 2.3E-134 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 SCD_RS09005 89b5adfd1c152511385d43e53290baae 337 PANTHER PTHR33376:SF7 2 332 6.0E-142 T 22-04-2016 SCD_RS09005 89b5adfd1c152511385d43e53290baae 337 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 29 283 2.2E-103 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 SCD_RS09005 89b5adfd1c152511385d43e53290baae 337 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 29 312 1.4E-109 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 SCD_RS10120 a566201a4c745b9af4c099270fa07ccd 202 PIRSF PIRSF000709 1 185 1.9E-8 T 22-04-2016 SCD_RS10120 a566201a4c745b9af4c099270fa07ccd 202 SMART SM00855 5 155 4.2E-15 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SCD_RS10120 a566201a4c745b9af4c099270fa07ccd 202 SUPERFAMILY SSF53254 1 186 1.07E-47 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SCD_RS10120 a566201a4c745b9af4c099270fa07ccd 202 Gene3D G3DSA:3.40.50.1240 1 185 1.6E-45 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SCD_RS10120 a566201a4c745b9af4c099270fa07ccd 202 PANTHER PTHR23029 6 185 1.8E-41 T 22-04-2016 SCD_RS10120 a566201a4c745b9af4c099270fa07ccd 202 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 8 187 2.6E-45 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SCD_RS10120 a566201a4c745b9af4c099270fa07ccd 202 PANTHER PTHR23029:SF1 6 185 1.8E-41 T 22-04-2016 SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 SUPERFAMILY SSF53067 187 382 6.17E-67 T 22-04-2016 SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 SUPERFAMILY SSF100920 384 540 1.27E-60 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 Gene3D G3DSA:3.30.30.30 53 106 1.0E-24 T 22-04-2016 SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 Pfam PF00012 Hsp70 protein 4 603 3.1E-261 T 22-04-2016 IPR013126 Heat shock protein 70 family SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 SUPERFAMILY SSF100934 507 609 6.87E-20 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 3.2E-290 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 632 36.609 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 Gene3D G3DSA:3.90.640.10 230 315 2.7E-32 T 22-04-2016 SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 Gene3D G3DSA:1.20.1270.10 532 603 1.2E-27 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 PANTHER PTHR19375:SF173 2 636 0.0 T 22-04-2016 SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 SUPERFAMILY SSF53067 4 184 5.02E-64 T 22-04-2016 SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 Gene3D G3DSA:2.60.34.10 390 531 4.5E-69 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 Gene3D G3DSA:3.30.420.40 119 195 4.9E-64 T 22-04-2016 SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 Gene3D G3DSA:3.30.420.40 4 52 4.9E-64 T 22-04-2016 SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 PANTHER PTHR19375 2 636 0.0 T 22-04-2016 SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 PRINTS PR00301 70kDa heat shock protein signature 365 385 2.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 PRINTS PR00301 70kDa heat shock protein signature 469 485 2.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 PRINTS PR00301 70kDa heat shock protein signature 138 158 2.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 PRINTS PR00301 70kDa heat shock protein signature 388 407 2.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 PRINTS PR00301 70kDa heat shock protein signature 198 208 2.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 PRINTS PR00301 70kDa heat shock protein signature 334 350 2.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 Gene3D G3DSA:3.30.420.40 196 229 7.3E-32 T 22-04-2016 SCD_RS04485 dc4bbd7d4eec3c91d71d0816047b4b0a 637 Gene3D G3DSA:3.30.420.40 319 360 7.3E-32 T 22-04-2016 SCD_RS11485 77c10c38b9a904f7d00a53bc239f4241 547 Pfam PF14559 Tetratricopeptide repeat 185 241 8.4E-6 T 22-04-2016 SCD_RS11485 77c10c38b9a904f7d00a53bc239f4241 547 SUPERFAMILY SSF52172 14 150 6.83E-23 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS11485 77c10c38b9a904f7d00a53bc239f4241 547 SUPERFAMILY SSF48452 175 377 3.8E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS11485 77c10c38b9a904f7d00a53bc239f4241 547 Gene3D G3DSA:3.40.50.2300 14 142 7.0E-22 T 22-04-2016 SCD_RS11485 77c10c38b9a904f7d00a53bc239f4241 547 SMART SM00028 205 238 13.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS11485 77c10c38b9a904f7d00a53bc239f4241 547 SMART SM00028 311 344 69.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS11485 77c10c38b9a904f7d00a53bc239f4241 547 SMART SM00028 273 306 88.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS11485 77c10c38b9a904f7d00a53bc239f4241 547 Pfam PF13181 Tetratricopeptide repeat 357 377 0.16 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS11485 77c10c38b9a904f7d00a53bc239f4241 547 PANTHER PTHR23083 95 115 8.1E-23 T 22-04-2016 SCD_RS11485 77c10c38b9a904f7d00a53bc239f4241 547 PANTHER PTHR23083 139 432 8.1E-23 T 22-04-2016 SCD_RS11485 77c10c38b9a904f7d00a53bc239f4241 547 PANTHER PTHR23083 463 531 8.1E-23 T 22-04-2016 SCD_RS11485 77c10c38b9a904f7d00a53bc239f4241 547 Gene3D G3DSA:1.25.40.10 146 369 4.0E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS11485 77c10c38b9a904f7d00a53bc239f4241 547 Pfam PF00072 Response regulator receiver domain 18 131 6.2E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS11485 77c10c38b9a904f7d00a53bc239f4241 547 SUPERFAMILY SSF48452 277 539 1.26E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS11485 77c10c38b9a904f7d00a53bc239f4241 547 Gene3D G3DSA:1.25.40.10 370 444 5.9E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS11485 77c10c38b9a904f7d00a53bc239f4241 547 SMART SM00448 15 131 1.3E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS14730 9aa34e6e4332dc133970f078acd76058 316 Pfam PF00535 Glycosyl transferase family 2 15 186 4.4E-31 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SCD_RS14730 9aa34e6e4332dc133970f078acd76058 316 SUPERFAMILY SSF53448 11 260 7.72E-52 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS14730 9aa34e6e4332dc133970f078acd76058 316 PANTHER PTHR22916 11 283 6.6E-42 T 22-04-2016 SCD_RS14730 9aa34e6e4332dc133970f078acd76058 316 Gene3D G3DSA:3.90.550.10 13 263 2.7E-46 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS07300 b6f97c82ec70dbd87228f009b5cd547c 203 PANTHER PTHR36917 1 20 7.5E-54 T 22-04-2016 SCD_RS07300 b6f97c82ec70dbd87228f009b5cd547c 203 PANTHER PTHR36917 44 200 7.5E-54 T 22-04-2016 SCD_RS07300 b6f97c82ec70dbd87228f009b5cd547c 203 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 199 18.951 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 SCD_RS07300 b6f97c82ec70dbd87228f009b5cd547c 203 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 200 3.3E-51 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 SCD_RS07300 b6f97c82ec70dbd87228f009b5cd547c 203 Pfam PF04279 Intracellular septation protein A 1 198 2.7E-69 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 SCD_RS07300 b6f97c82ec70dbd87228f009b5cd547c 203 PANTHER PTHR36917:SF1 1 20 7.5E-54 T 22-04-2016 SCD_RS07300 b6f97c82ec70dbd87228f009b5cd547c 203 PANTHER PTHR36917:SF1 44 200 7.5E-54 T 22-04-2016 SCD_RS12495 9d538a4aaac44e5fa529ae3a3e22de53 86 Gene3D G3DSA:3.40.1620.10 2 50 8.4E-8 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SCD_RS12495 9d538a4aaac44e5fa529ae3a3e22de53 86 SUPERFAMILY SSF143120 1 78 1.09E-23 T 22-04-2016 SCD_RS12495 9d538a4aaac44e5fa529ae3a3e22de53 86 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 70 3.1E-22 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SCD_RS12495 9d538a4aaac44e5fa529ae3a3e22de53 86 PANTHER PTHR33713 1 79 2.3E-21 T 22-04-2016 SCD_RS12495 9d538a4aaac44e5fa529ae3a3e22de53 86 PANTHER PTHR33713:SF6 1 79 2.3E-21 T 22-04-2016 SCD_RS12495 9d538a4aaac44e5fa529ae3a3e22de53 86 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 54 4.1E-13 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SCD_RS07555 1319b36973903911fb3683af0a1081e7 331 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 4 203 7.4E-59 T 22-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS07555 1319b36973903911fb3683af0a1081e7 331 Gene3D G3DSA:3.40.50.300 5 170 7.6E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07555 1319b36973903911fb3683af0a1081e7 331 PANTHER PTHR11669 7 71 4.4E-47 T 22-04-2016 SCD_RS07555 1319b36973903911fb3683af0a1081e7 331 PANTHER PTHR11669 96 223 4.4E-47 T 22-04-2016 SCD_RS07555 1319b36973903911fb3683af0a1081e7 331 Pfam PF13177 DNA polymerase III, delta subunit 5 169 8.4E-39 T 22-04-2016 SCD_RS07555 1319b36973903911fb3683af0a1081e7 331 PANTHER PTHR11669:SF8 7 71 4.4E-47 T 22-04-2016 SCD_RS07555 1319b36973903911fb3683af0a1081e7 331 PANTHER PTHR11669:SF8 96 223 4.4E-47 T 22-04-2016 SCD_RS07555 1319b36973903911fb3683af0a1081e7 331 SUPERFAMILY SSF52540 6 205 2.1E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02045 8c9ccbb00ee0f0ec7d11c2f6d1bfe04f 246 SUPERFAMILY SSF51735 2 244 1.79E-71 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS02045 8c9ccbb00ee0f0ec7d11c2f6d1bfe04f 246 Gene3D G3DSA:3.40.50.720 1 244 5.1E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS02045 8c9ccbb00ee0f0ec7d11c2f6d1bfe04f 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SCD_RS02045 8c9ccbb00ee0f0ec7d11c2f6d1bfe04f 246 PANTHER PTHR24322:SF211 153 184 1.3E-63 T 22-04-2016 SCD_RS02045 8c9ccbb00ee0f0ec7d11c2f6d1bfe04f 246 PANTHER PTHR24322:SF211 8 137 1.3E-63 T 22-04-2016 SCD_RS02045 8c9ccbb00ee0f0ec7d11c2f6d1bfe04f 246 PANTHER PTHR24322 153 184 1.3E-63 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS02045 8c9ccbb00ee0f0ec7d11c2f6d1bfe04f 246 PANTHER PTHR24322 8 137 1.3E-63 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS02045 8c9ccbb00ee0f0ec7d11c2f6d1bfe04f 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 1.8E-50 T 22-04-2016 SCD_RS02045 8c9ccbb00ee0f0ec7d11c2f6d1bfe04f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.9E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS02045 8c9ccbb00ee0f0ec7d11c2f6d1bfe04f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 3.9E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS02045 8c9ccbb00ee0f0ec7d11c2f6d1bfe04f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.9E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS02045 8c9ccbb00ee0f0ec7d11c2f6d1bfe04f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.9E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS02045 8c9ccbb00ee0f0ec7d11c2f6d1bfe04f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.9E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS02045 8c9ccbb00ee0f0ec7d11c2f6d1bfe04f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.9E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS02045 8c9ccbb00ee0f0ec7d11c2f6d1bfe04f 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 5.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS02045 8c9ccbb00ee0f0ec7d11c2f6d1bfe04f 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 5.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS02045 8c9ccbb00ee0f0ec7d11c2f6d1bfe04f 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 5.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS02720 7b269455fbf11c2b6656597484c3c25c 178 PANTHER PTHR39336 3 176 8.8E-62 T 22-04-2016 SCD_RS02720 7b269455fbf11c2b6656597484c3c25c 178 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 9 99 8.6E-10 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SCD_RS02720 7b269455fbf11c2b6656597484c3c25c 178 SUPERFAMILY SSF50475 6 127 4.85E-15 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SCD_RS02720 7b269455fbf11c2b6656597484c3c25c 178 Gene3D G3DSA:2.30.110.10 3 126 4.1E-17 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SCD_RS02720 7b269455fbf11c2b6656597484c3c25c 178 PANTHER PTHR39336:SF2 3 176 8.8E-62 T 22-04-2016 SCD_RS15655 99899c0c770ed5f802ada9f52752352e 167 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 74 7.4E-15 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 SCD_RS15655 99899c0c770ed5f802ada9f52752352e 167 SUPERFAMILY SSF89069 1 67 2.48E-11 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 SCD_RS14920 da685914d70e54e41b00c361841aea9e 213 PANTHER PTHR26402 3 206 2.4E-45 T 22-04-2016 SCD_RS14920 da685914d70e54e41b00c361841aea9e 213 PANTHER PTHR26402:SF458 3 206 2.4E-45 T 22-04-2016 SCD_RS14920 da685914d70e54e41b00c361841aea9e 213 SUPERFAMILY SSF46894 139 206 6.46E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SCD_RS14920 da685914d70e54e41b00c361841aea9e 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 201 1.7E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS14920 da685914d70e54e41b00c361841aea9e 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 9.4E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS14920 da685914d70e54e41b00c361841aea9e 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 9.4E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS14920 da685914d70e54e41b00c361841aea9e 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 9.4E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS14920 da685914d70e54e41b00c361841aea9e 213 SUPERFAMILY SSF52172 2 131 8.82E-20 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS14920 da685914d70e54e41b00c361841aea9e 213 Gene3D G3DSA:3.40.50.2300 2 119 6.3E-23 T 22-04-2016 SCD_RS14920 da685914d70e54e41b00c361841aea9e 213 Pfam PF00072 Response regulator receiver domain 5 116 1.3E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS14920 da685914d70e54e41b00c361841aea9e 213 Gene3D G3DSA:1.10.10.10 120 207 1.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS14920 da685914d70e54e41b00c361841aea9e 213 SMART SM00421 144 201 1.1E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS14920 da685914d70e54e41b00c361841aea9e 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 161 188 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS14920 da685914d70e54e41b00c361841aea9e 213 SMART SM00448 3 116 2.3E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS02475 0fb7d3dfa7b4f28e90493adf61762766 187 SUPERFAMILY SSF53271 10 174 4.71E-24 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SCD_RS02475 0fb7d3dfa7b4f28e90493adf61762766 187 Pfam PF00156 Phosphoribosyl transferase domain 19 157 4.5E-20 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SCD_RS02475 0fb7d3dfa7b4f28e90493adf61762766 187 PANTHER PTHR11608 5 185 6.4E-16 T 22-04-2016 SCD_RS02475 0fb7d3dfa7b4f28e90493adf61762766 187 Gene3D G3DSA:3.40.50.2020 9 159 7.4E-30 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SCD_RS05075 3c163a1ace7c855a6860062fc5380091 230 PANTHER PTHR30128 76 196 7.5E-28 T 22-04-2016 SCD_RS05075 3c163a1ace7c855a6860062fc5380091 230 Pfam PF00691 OmpA family 107 197 6.6E-20 T 22-04-2016 IPR006665 OmpA-like domain SCD_RS05075 3c163a1ace7c855a6860062fc5380091 230 SUPERFAMILY SSF103088 98 221 1.96E-30 T 22-04-2016 IPR006665 OmpA-like domain SCD_RS05075 3c163a1ace7c855a6860062fc5380091 230 ProSitePatterns PS01068 OmpA-like domain. 142 186 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 SCD_RS05075 3c163a1ace7c855a6860062fc5380091 230 PRINTS PR01021 OMPA domain signature 155 171 2.6E-16 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SCD_RS05075 3c163a1ace7c855a6860062fc5380091 230 PRINTS PR01021 OMPA domain signature 108 130 2.6E-16 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SCD_RS05075 3c163a1ace7c855a6860062fc5380091 230 PRINTS PR01021 OMPA domain signature 140 155 2.6E-16 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SCD_RS05075 3c163a1ace7c855a6860062fc5380091 230 Gene3D G3DSA:3.30.1330.60 97 221 1.2E-36 T 22-04-2016 IPR006665 OmpA-like domain SCD_RS04385 1ef4cf5c5d50ce241d62fc234ffa5d7e 84 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 23 71 1.4E-6 T 22-04-2016 IPR012933 HicA mRNA interferase family GO:0003729 SCD_RS04385 1ef4cf5c5d50ce241d62fc234ffa5d7e 84 SUPERFAMILY SSF54786 21 72 7.85E-6 T 22-04-2016 SCD_RS04385 1ef4cf5c5d50ce241d62fc234ffa5d7e 84 Gene3D G3DSA:3.30.920.30 22 70 5.6E-4 T 22-04-2016 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 1.7E-55 T 22-04-2016 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.7E-55 T 22-04-2016 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 322 329 1.7E-55 T 22-04-2016 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 358 379 1.7E-55 T 22-04-2016 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 293 1.7E-55 T 22-04-2016 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 192 217 1.7E-55 T 22-04-2016 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 36 51 1.7E-55 T 22-04-2016 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 438 1.7E-55 T 22-04-2016 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 PANTHER PTHR22912:SF125 1 116 5.2E-121 T 22-04-2016 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 PANTHER PTHR22912:SF125 150 474 5.2E-121 T 22-04-2016 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 192 210 4.4E-38 T 22-04-2016 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 4.4E-38 T 22-04-2016 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 307 329 4.4E-38 T 22-04-2016 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 4.4E-38 T 22-04-2016 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 278 294 4.4E-38 T 22-04-2016 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 SUPERFAMILY SSF55424 358 474 2.75E-27 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 Gene3D G3DSA:3.30.390.30 349 471 1.9E-30 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 37 47 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 362 469 2.1E-22 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 341 6.0E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 Gene3D G3DSA:3.50.50.60 2 156 2.6E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 PANTHER PTHR22912 1 116 5.2E-121 T 22-04-2016 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 PANTHER PTHR22912 150 474 5.2E-121 T 22-04-2016 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 Gene3D G3DSA:3.50.50.60 157 348 2.6E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS13375 f68265bdd04555b157a075888a67b848 496 SUPERFAMILY SSF51905 1 350 3.16E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS06110 1f5887e5e1bbe0528cc4e9e47ce243f8 164 Pfam PF03748 Flagellar basal body-associated protein FliL 63 164 7.6E-29 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 SCD_RS06110 1f5887e5e1bbe0528cc4e9e47ce243f8 164 PANTHER PTHR35091 3 164 1.4E-39 T 22-04-2016 SCD_RS06110 1f5887e5e1bbe0528cc4e9e47ce243f8 164 PANTHER PTHR35091:SF1 3 164 1.4E-39 T 22-04-2016 SCD_RS03050 977eae86dabb7cf0384ef1c639f96fc0 143 SMART SM00649 9 141 5.9E-82 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SCD_RS03050 977eae86dabb7cf0384ef1c639f96fc0 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 5.1E-65 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 SCD_RS03050 977eae86dabb7cf0384ef1c639f96fc0 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 4.0E-15 T 22-04-2016 SCD_RS03050 977eae86dabb7cf0384ef1c639f96fc0 143 SUPERFAMILY SSF46906 68 141 7.72E-26 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SCD_RS03050 977eae86dabb7cf0384ef1c639f96fc0 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 22-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 SCD_RS03050 977eae86dabb7cf0384ef1c639f96fc0 143 Gene3D G3DSA:3.30.1550.10 2 72 2.7E-37 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal SCD_RS03050 977eae86dabb7cf0384ef1c639f96fc0 143 SUPERFAMILY SSF54747 3 73 2.22E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal SCD_RS03050 977eae86dabb7cf0384ef1c639f96fc0 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.277 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SCD_RS03050 977eae86dabb7cf0384ef1c639f96fc0 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 4.2E-29 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal SCD_RS03050 977eae86dabb7cf0384ef1c639f96fc0 143 Gene3D G3DSA:1.10.10.250 73 141 4.5E-30 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SCD_RS03050 977eae86dabb7cf0384ef1c639f96fc0 143 PANTHER PTHR11661 2 142 3.7E-65 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SCD_RS03050 977eae86dabb7cf0384ef1c639f96fc0 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 2.7E-23 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SCD_RS00805 46571a42ae84b56530f43ed1da0cf8f7 180 Gene3D G3DSA:1.25.40.20 33 153 2.6E-31 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SCD_RS00805 46571a42ae84b56530f43ed1da0cf8f7 180 SUPERFAMILY SSF48403 37 152 1.71E-29 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SCD_RS00805 46571a42ae84b56530f43ed1da0cf8f7 180 PANTHER PTHR24193 36 158 1.6E-33 T 22-04-2016 SCD_RS00805 46571a42ae84b56530f43ed1da0cf8f7 180 Pfam PF12796 Ankyrin repeats (3 copies) 38 129 2.7E-15 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SCD_RS00805 46571a42ae84b56530f43ed1da0cf8f7 180 PRINTS PR01415 Ankyrin repeat signature 116 130 9.7E-7 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS00805 46571a42ae84b56530f43ed1da0cf8f7 180 PRINTS PR01415 Ankyrin repeat signature 68 83 9.7E-7 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS00805 46571a42ae84b56530f43ed1da0cf8f7 180 SMART SM00248 67 96 1.8E-4 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS00805 46571a42ae84b56530f43ed1da0cf8f7 180 SMART SM00248 100 129 2.5E-7 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS00115 be775d1c8b85cfeb5d7307a010bb2550 429 Gene3D G3DSA:1.20.1250.20 34 223 3.1E-21 T 22-04-2016 SCD_RS00115 be775d1c8b85cfeb5d7307a010bb2550 429 Gene3D G3DSA:1.20.1250.20 245 426 4.3E-10 T 22-04-2016 SCD_RS00115 be775d1c8b85cfeb5d7307a010bb2550 429 Pfam PF07690 Major Facilitator Superfamily 58 368 1.2E-23 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SCD_RS00115 be775d1c8b85cfeb5d7307a010bb2550 429 SUPERFAMILY SSF103473 15 427 5.36E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain SCD_RS00115 be775d1c8b85cfeb5d7307a010bb2550 429 PANTHER PTHR23508:SF5 9 420 7.5E-222 T 22-04-2016 SCD_RS00115 be775d1c8b85cfeb5d7307a010bb2550 429 PANTHER PTHR23508 9 420 7.5E-222 T 22-04-2016 SCD_RS12215 1d2ad7ac7771bf406d6008d650710bd3 312 PRINTS PR00502 NUDIX hydrolase family signature 34 48 3.5E-7 T 22-04-2016 IPR020476 NUDIX hydrolase SCD_RS12215 1d2ad7ac7771bf406d6008d650710bd3 312 PRINTS PR00502 NUDIX hydrolase family signature 48 63 3.5E-7 T 22-04-2016 IPR020476 NUDIX hydrolase SCD_RS12215 1d2ad7ac7771bf406d6008d650710bd3 312 Pfam PF00293 NUDIX domain 8 108 3.9E-18 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SCD_RS12215 1d2ad7ac7771bf406d6008d650710bd3 312 Pfam PF02581 Thiamine monophosphate synthase/TENI 133 307 1.6E-42 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SCD_RS12215 1d2ad7ac7771bf406d6008d650710bd3 312 SUPERFAMILY SSF55811 5 127 6.09E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SCD_RS12215 1d2ad7ac7771bf406d6008d650710bd3 312 Gene3D G3DSA:3.90.79.10 6 123 4.4E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SCD_RS12215 1d2ad7ac7771bf406d6008d650710bd3 312 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SCD_RS12215 1d2ad7ac7771bf406d6008d650710bd3 312 SUPERFAMILY SSF51391 116 312 4.19E-49 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SCD_RS12215 1d2ad7ac7771bf406d6008d650710bd3 312 PANTHER PTHR20857 116 312 8.1E-29 T 22-04-2016 SCD_RS12215 1d2ad7ac7771bf406d6008d650710bd3 312 Gene3D G3DSA:3.20.20.70 124 312 7.2E-48 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS07310 551c86b0faef96ffd85dfcb41cea84a0 210 PANTHER PTHR17490:SF7 1 210 4.2E-89 T 22-04-2016 SCD_RS07310 551c86b0faef96ffd85dfcb41cea84a0 210 Gene3D G3DSA:3.90.870.10 3 202 9.5E-61 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SCD_RS07310 551c86b0faef96ffd85dfcb41cea84a0 210 Pfam PF01300 Telomere recombination 22 198 4.7E-43 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 SCD_RS07310 551c86b0faef96ffd85dfcb41cea84a0 210 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 202 5.6E-61 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 SCD_RS07310 551c86b0faef96ffd85dfcb41cea84a0 210 PANTHER PTHR17490 1 210 4.2E-89 T 22-04-2016 SCD_RS07310 551c86b0faef96ffd85dfcb41cea84a0 210 SUPERFAMILY SSF55821 1 203 2.44E-62 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SCD_RS12085 bff33440bb28d5c2535e50eb8486ab7a 132 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 131 8.6E-44 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SCD_RS12085 bff33440bb28d5c2535e50eb8486ab7a 132 SUPERFAMILY SSF81330 13 127 3.01E-34 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SCD_RS12085 bff33440bb28d5c2535e50eb8486ab7a 132 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 131 3.9E-47 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SCD_RS12085 bff33440bb28d5c2535e50eb8486ab7a 132 PANTHER PTHR30266:SF2 1 132 1.7E-51 T 22-04-2016 SCD_RS12085 bff33440bb28d5c2535e50eb8486ab7a 132 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 1.0E-9 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SCD_RS12085 bff33440bb28d5c2535e50eb8486ab7a 132 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 1.0E-9 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SCD_RS12085 bff33440bb28d5c2535e50eb8486ab7a 132 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 1.0E-9 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SCD_RS12085 bff33440bb28d5c2535e50eb8486ab7a 132 PANTHER PTHR30266 1 132 1.7E-51 T 22-04-2016 SCD_RS12085 bff33440bb28d5c2535e50eb8486ab7a 132 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 22-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site SCD_RS12085 bff33440bb28d5c2535e50eb8486ab7a 132 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 132 26.551 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SCD_RS08205 b1773bccda0a64ecd484727fdcd2b94e 373 PANTHER PTHR30244:SF16 1 370 1.6E-146 T 22-04-2016 SCD_RS08205 b1773bccda0a64ecd484727fdcd2b94e 373 Gene3D G3DSA:3.40.640.10 5 245 2.0E-85 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS08205 b1773bccda0a64ecd484727fdcd2b94e 373 Gene3D G3DSA:3.90.1150.10 247 368 9.2E-20 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS08205 b1773bccda0a64ecd484727fdcd2b94e 373 PIRSF PIRSF000390 1 370 1.4E-121 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SCD_RS08205 b1773bccda0a64ecd484727fdcd2b94e 373 PANTHER PTHR30244 1 370 1.6E-146 T 22-04-2016 SCD_RS08205 b1773bccda0a64ecd484727fdcd2b94e 373 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 363 9.6E-123 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SCD_RS08205 b1773bccda0a64ecd484727fdcd2b94e 373 SUPERFAMILY SSF53383 4 368 2.77E-103 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS04700 f8be43518b923f630bddf7b75c7540c2 763 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 76 1.0E-20 T 22-04-2016 SCD_RS04700 f8be43518b923f630bddf7b75c7540c2 763 SUPERFAMILY SSF53706 213 640 5.68E-93 T 22-04-2016 SCD_RS04700 f8be43518b923f630bddf7b75c7540c2 763 Gene3D G3DSA:2.40.40.20 659 744 6.6E-5 T 22-04-2016 SCD_RS04700 f8be43518b923f630bddf7b75c7540c2 763 Gene3D G3DSA:3.10.20.30 3 57 1.5E-7 T 22-04-2016 IPR012675 Beta-grasp domain SCD_RS04700 f8be43518b923f630bddf7b75c7540c2 763 SUPERFAMILY SSF54862 76 210 9.21E-37 T 22-04-2016 SCD_RS04700 f8be43518b923f630bddf7b75c7540c2 763 SUPERFAMILY SSF50692 674 752 8.7E-6 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SCD_RS04700 f8be43518b923f630bddf7b75c7540c2 763 SMART SM00929 83 123 1.3E-21 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 SCD_RS04700 f8be43518b923f630bddf7b75c7540c2 763 Gene3D G3DSA:3.40.50.740 272 343 9.8E-53 T 22-04-2016 SCD_RS04700 f8be43518b923f630bddf7b75c7540c2 763 Gene3D G3DSA:3.40.50.740 468 639 9.8E-53 T 22-04-2016 SCD_RS04700 f8be43518b923f630bddf7b75c7540c2 763 PANTHER PTHR11615:SF115 542 635 1.7E-165 T 22-04-2016 SCD_RS04700 f8be43518b923f630bddf7b75c7540c2 763 PANTHER PTHR11615:SF115 351 518 1.7E-165 T 22-04-2016 SCD_RS04700 f8be43518b923f630bddf7b75c7540c2 763 PANTHER PTHR11615:SF115 3 331 1.7E-165 T 22-04-2016 SCD_RS04700 f8be43518b923f630bddf7b75c7540c2 763 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 SCD_RS04700 f8be43518b923f630bddf7b75c7540c2 763 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 SCD_RS04700 f8be43518b923f630bddf7b75c7540c2 763 Pfam PF00384 Molybdopterin oxidoreductase 272 616 2.7E-35 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SCD_RS04700 f8be43518b923f630bddf7b75c7540c2 763 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 122 2.9E-17 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 SCD_RS04700 f8be43518b923f630bddf7b75c7540c2 763 Pfam PF01568 Molydopterin dinucleotide binding domain 674 746 1.1E-6 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SCD_RS04700 f8be43518b923f630bddf7b75c7540c2 763 PANTHER PTHR11615 542 635 1.7E-165 T 22-04-2016 SCD_RS04700 f8be43518b923f630bddf7b75c7540c2 763 PANTHER PTHR11615 351 518 1.7E-165 T 22-04-2016 SCD_RS04700 f8be43518b923f630bddf7b75c7540c2 763 PANTHER PTHR11615 3 331 1.7E-165 T 22-04-2016 SCD_RS04700 f8be43518b923f630bddf7b75c7540c2 763 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 616 1.9E-207 T 22-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 SCD_RS04700 f8be43518b923f630bddf7b75c7540c2 763 SUPERFAMILY SSF54292 1 74 2.94E-20 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SCD_RS04700 f8be43518b923f630bddf7b75c7540c2 763 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 145 155 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 SCD_RS01965 4c60524ebf4c2bfee77eafa5cdf3d28d 653 SUPERFAMILY SSF48435 29 470 4.05E-115 T 22-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 SCD_RS01965 4c60524ebf4c2bfee77eafa5cdf3d28d 653 Pfam PF01464 Transglycosylase SLT domain 477 585 5.0E-22 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 SCD_RS01965 4c60524ebf4c2bfee77eafa5cdf3d28d 653 PANTHER PTHR21666 458 615 3.5E-38 T 22-04-2016 SCD_RS01965 4c60524ebf4c2bfee77eafa5cdf3d28d 653 Pfam PF14718 Soluble lytic murein transglycosylase L domain 400 460 2.6E-12 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 SCD_RS01965 4c60524ebf4c2bfee77eafa5cdf3d28d 653 SUPERFAMILY SSF53955 472 630 3.59E-45 T 22-04-2016 IPR023346 Lysozyme-like domain SCD_RS01965 4c60524ebf4c2bfee77eafa5cdf3d28d 653 Gene3D G3DSA:1.25.20.10 27 379 4.7E-97 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 SCD_RS01965 4c60524ebf4c2bfee77eafa5cdf3d28d 653 Gene3D G3DSA:1.10.530.10 468 629 2.4E-47 T 22-04-2016 SCD_RS01965 4c60524ebf4c2bfee77eafa5cdf3d28d 653 Gene3D G3DSA:1.10.1240.20 400 455 8.1E-11 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 SCD_RS08695 0ebe03746b619b6fbe4e0867e6b11a38 157 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 4.7E-70 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SCD_RS08695 0ebe03746b619b6fbe4e0867e6b11a38 157 SUPERFAMILY SSF69765 1 156 6.28E-68 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SCD_RS08695 0ebe03746b619b6fbe4e0867e6b11a38 157 Pfam PF02542 YgbB family 1 155 9.5E-68 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SCD_RS08695 0ebe03746b619b6fbe4e0867e6b11a38 157 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SCD_RS08695 0ebe03746b619b6fbe4e0867e6b11a38 157 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 37.818 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SCD_RS08695 0ebe03746b619b6fbe4e0867e6b11a38 157 PANTHER PTHR32125 1 157 4.5E-60 T 22-04-2016 SCD_RS08695 0ebe03746b619b6fbe4e0867e6b11a38 157 Gene3D G3DSA:3.30.1330.50 1 156 1.8E-73 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SCD_RS13950 aab93ab47dca4314c54520a0a2e9949d 208 Pfam PF01464 Transglycosylase SLT domain 84 178 2.7E-27 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 SCD_RS13950 aab93ab47dca4314c54520a0a2e9949d 208 PANTHER PTHR21666 60 204 1.6E-35 T 22-04-2016 SCD_RS13950 aab93ab47dca4314c54520a0a2e9949d 208 SUPERFAMILY SSF53955 71 202 2.73E-45 T 22-04-2016 IPR023346 Lysozyme-like domain SCD_RS13950 aab93ab47dca4314c54520a0a2e9949d 208 Pfam PF13511 Domain of unknown function (DUF4124) 14 56 4.7E-5 T 22-04-2016 IPR025392 Domain of unknown function DUF4124 SCD_RS13950 aab93ab47dca4314c54520a0a2e9949d 208 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 98 126 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 SCD_RS13950 aab93ab47dca4314c54520a0a2e9949d 208 Gene3D G3DSA:1.10.530.10 76 204 1.5E-45 T 22-04-2016 SCD_RS14625 9314368a8a0c6b13a2ffd204e84d5b7b 283 Gene3D G3DSA:3.20.20.370 4 237 4.9E-50 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SCD_RS14625 9314368a8a0c6b13a2ffd204e84d5b7b 283 Pfam PF01522 Polysaccharide deacetylase 41 148 1.3E-18 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SCD_RS14625 9314368a8a0c6b13a2ffd204e84d5b7b 283 PANTHER PTHR10587:SF85 38 164 1.2E-23 T 22-04-2016 SCD_RS14625 9314368a8a0c6b13a2ffd204e84d5b7b 283 Pfam PF11959 Domain of unknown function (DUF3473) 150 278 1.5E-53 T 22-04-2016 IPR022560 Domain of unknown function DUF3473 SCD_RS14625 9314368a8a0c6b13a2ffd204e84d5b7b 283 PANTHER PTHR10587 38 164 1.2E-23 T 22-04-2016 SCD_RS14625 9314368a8a0c6b13a2ffd204e84d5b7b 283 SUPERFAMILY SSF88713 9 256 3.71E-41 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SCD_RS14625 9314368a8a0c6b13a2ffd204e84d5b7b 283 TIGRFAM TIGR03006 pepcterm_polyde: polysaccharide deacetylase family protein, PEP-CTERM locus subfamily 8 279 6.8E-139 T 22-04-2016 IPR014344 PEP-CTERM locus, polysaccharide deactylase SCD_RS09705 fbb92ca71db744eac0dfd4b445767436 347 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 3 335 1.6E-145 T 22-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 SCD_RS09705 fbb92ca71db744eac0dfd4b445767436 347 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 315 1.9E-74 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 SCD_RS09705 fbb92ca71db744eac0dfd4b445767436 347 PANTHER PTHR30160 1 345 8.4E-96 T 22-04-2016 SCD_RS09705 fbb92ca71db744eac0dfd4b445767436 347 PANTHER PTHR30160:SF7 1 345 8.4E-96 T 22-04-2016 SCD_RS09705 fbb92ca71db744eac0dfd4b445767436 347 Gene3D G3DSA:3.40.50.2000 3 147 2.0E-52 T 22-04-2016 SCD_RS09705 fbb92ca71db744eac0dfd4b445767436 347 Gene3D G3DSA:3.40.50.2000 161 335 2.4E-57 T 22-04-2016 SCD_RS09705 fbb92ca71db744eac0dfd4b445767436 347 SUPERFAMILY SSF53756 3 335 3.86E-101 T 22-04-2016 SCD_RS03780 524155470f26cda22812bcf3be3ad0a4 378 Gene3D G3DSA:3.40.50.700 41 217 2.0E-57 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SCD_RS03780 524155470f26cda22812bcf3be3ad0a4 378 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 205 222 1.1E-70 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SCD_RS03780 524155470f26cda22812bcf3be3ad0a4 378 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 62 86 1.1E-70 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SCD_RS03780 524155470f26cda22812bcf3be3ad0a4 378 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 179 202 1.1E-70 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SCD_RS03780 524155470f26cda22812bcf3be3ad0a4 378 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 39 61 1.1E-70 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SCD_RS03780 524155470f26cda22812bcf3be3ad0a4 378 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 223 241 1.1E-70 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SCD_RS03780 524155470f26cda22812bcf3be3ad0a4 378 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 151 175 1.1E-70 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SCD_RS03780 524155470f26cda22812bcf3be3ad0a4 378 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 247 273 1.1E-70 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SCD_RS03780 524155470f26cda22812bcf3be3ad0a4 378 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 108 131 1.1E-70 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SCD_RS03780 524155470f26cda22812bcf3be3ad0a4 378 PANTHER PTHR30013 5 355 3.0E-183 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SCD_RS03780 524155470f26cda22812bcf3be3ad0a4 378 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 218 297 5.6E-28 T 22-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal SCD_RS03780 524155470f26cda22812bcf3be3ad0a4 378 PANTHER PTHR30013:SF8 5 355 3.0E-183 T 22-04-2016 SCD_RS03780 524155470f26cda22812bcf3be3ad0a4 378 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 5 350 7.6E-135 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SCD_RS03780 524155470f26cda22812bcf3be3ad0a4 378 SUPERFAMILY SSF56770 40 297 2.35E-86 T 22-04-2016 SCD_RS03780 524155470f26cda22812bcf3be3ad0a4 378 PIRSF PIRSF000310 2 357 4.1E-126 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SCD_RS03780 524155470f26cda22812bcf3be3ad0a4 378 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 54 198 8.4E-32 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SCD_RS03780 524155470f26cda22812bcf3be3ad0a4 378 Gene3D G3DSA:4.10.480.10 218 294 1.0E-31 T 22-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal SCD_RS03780 524155470f26cda22812bcf3be3ad0a4 378 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 8 32 3.3E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 Pfam PF08264 Anticodon-binding domain of tRNA 672 791 3.9E-17 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 SUPERFAMILY SSF50677 226 427 1.0E-51 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 Gene3D G3DSA:1.10.730.10 616 762 1.9E-43 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 SUPERFAMILY SSF52374 428 635 7.72E-151 T 22-04-2016 SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 SUPERFAMILY SSF52374 7 226 7.72E-151 T 22-04-2016 SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 415 4.0E-69 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 430 626 7.8E-24 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 16 171 8.1E-27 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 Gene3D G3DSA:3.40.50.620 4 222 2.1E-155 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 Gene3D G3DSA:3.40.50.620 437 615 2.1E-155 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 PANTHER PTHR11946:SF7 251 827 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 PANTHER PTHR11946:SF7 1 206 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 5.2E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 5.2E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 PRINTS PR00985 Leucyl-tRNA synthetase signature 569 579 5.2E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 PRINTS PR00985 Leucyl-tRNA synthetase signature 498 516 5.2E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 5.2E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 5.2E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 PRINTS PR00985 Leucyl-tRNA synthetase signature 536 558 5.2E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 PANTHER PTHR11946 251 827 0.0 T 22-04-2016 SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 PANTHER PTHR11946 1 206 0.0 T 22-04-2016 SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 7 583 2.5E-263 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 Gene3D G3DSA:3.90.740.10 223 436 8.5E-53 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 SUPERFAMILY SSF47323 630 827 2.43E-35 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS00270 eae812780b6e8214470e3be6cd507dd0 827 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 827 23.425 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SCD_RS10460 69e1c89ee1d79090a1b318d62cf21496 262 Gene3D G3DSA:3.40.50.150 18 241 4.4E-57 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS10460 69e1c89ee1d79090a1b318d62cf21496 262 SUPERFAMILY SSF53335 23 255 3.87E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS10460 69e1c89ee1d79090a1b318d62cf21496 262 Pfam PF01564 Spermine/spermidine synthase 50 174 1.6E-8 T 22-04-2016 SCD_RS03885 ba3773324db4300d54fb31b892377a74 228 PANTHER PTHR11587:SF3 3 222 2.7E-104 T 22-04-2016 SCD_RS03885 ba3773324db4300d54fb31b892377a74 228 PIRSF PIRSF006293 2 226 1.4E-76 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SCD_RS03885 ba3773324db4300d54fb31b892377a74 228 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 220 55.087 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SCD_RS03885 ba3773324db4300d54fb31b892377a74 228 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 5 207 6.7E-59 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SCD_RS03885 ba3773324db4300d54fb31b892377a74 228 Gene3D G3DSA:3.40.50.620 3 225 7.4E-79 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS03885 ba3773324db4300d54fb31b892377a74 228 PANTHER PTHR11587 3 222 2.7E-104 T 22-04-2016 SCD_RS03885 ba3773324db4300d54fb31b892377a74 228 Pfam PF06508 Queuosine biosynthesis protein QueC 4 213 1.4E-76 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SCD_RS03885 ba3773324db4300d54fb31b892377a74 228 SUPERFAMILY SSF52402 3 225 5.73E-63 T 22-04-2016 SCD_RS12350 9ea05ad59f2e70adfde212e34ece95b6 151 Pfam PF03625 Domain of unknown function DUF302 62 117 5.1E-5 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SCD_RS12350 9ea05ad59f2e70adfde212e34ece95b6 151 SUPERFAMILY SSF103247 26 147 3.4E-20 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SCD_RS12350 9ea05ad59f2e70adfde212e34ece95b6 151 Gene3D G3DSA:3.30.310.70 25 147 2.7E-18 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SCD_RS08950 7070d0bdd495f4d3cb489c7436f56567 419 PANTHER PTHR11476:SF9 4 418 1.6E-200 T 22-04-2016 SCD_RS08950 7070d0bdd495f4d3cb489c7436f56567 419 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 5 405 2.1E-154 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 SCD_RS08950 7070d0bdd495f4d3cb489c7436f56567 419 Gene3D G3DSA:3.40.50.800 326 416 6.8E-30 T 22-04-2016 IPR004154 Anticodon-binding SCD_RS08950 7070d0bdd495f4d3cb489c7436f56567 419 Pfam PF03129 Anticodon binding domain 332 416 4.3E-12 T 22-04-2016 IPR004154 Anticodon-binding SCD_RS08950 7070d0bdd495f4d3cb489c7436f56567 419 PANTHER PTHR11476 4 418 1.6E-200 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 SCD_RS08950 7070d0bdd495f4d3cb489c7436f56567 419 PIRSF PIRSF001549 1 418 3.8E-116 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 SCD_RS08950 7070d0bdd495f4d3cb489c7436f56567 419 SUPERFAMILY SSF52954 327 416 4.53E-21 T 22-04-2016 IPR004154 Anticodon-binding SCD_RS08950 7070d0bdd495f4d3cb489c7436f56567 419 Gene3D G3DSA:3.30.930.10 220 318 1.9E-92 T 22-04-2016 SCD_RS08950 7070d0bdd495f4d3cb489c7436f56567 419 Gene3D G3DSA:3.30.930.10 4 184 1.9E-92 T 22-04-2016 SCD_RS08950 7070d0bdd495f4d3cb489c7436f56567 419 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 418 32.235 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 SCD_RS08950 7070d0bdd495f4d3cb489c7436f56567 419 SUPERFAMILY SSF55681 4 317 1.1E-100 T 22-04-2016 SCD_RS08950 7070d0bdd495f4d3cb489c7436f56567 419 Pfam PF13393 Histidyl-tRNA synthetase 9 311 4.5E-48 T 22-04-2016 SCD_RS03330 7fcb6ee1429a66ca9c32fd31fbf478e1 172 Gene3D G3DSA:3.30.420.10 2 154 1.2E-66 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS03330 7fcb6ee1429a66ca9c32fd31fbf478e1 172 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 112 146 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 SCD_RS03330 7fcb6ee1429a66ca9c32fd31fbf478e1 172 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 149 2.0E-56 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SCD_RS03330 7fcb6ee1429a66ca9c32fd31fbf478e1 172 SUPERFAMILY SSF53098 2 153 7.33E-56 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS03330 7fcb6ee1429a66ca9c32fd31fbf478e1 172 PANTHER PTHR30194 1 168 4.2E-65 T 22-04-2016 SCD_RS03330 7fcb6ee1429a66ca9c32fd31fbf478e1 172 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 153 1.3E-61 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SCD_RS03330 7fcb6ee1429a66ca9c32fd31fbf478e1 172 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 152 47.37 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SCD_RS03330 7fcb6ee1429a66ca9c32fd31fbf478e1 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 60 76 2.4E-34 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SCD_RS03330 7fcb6ee1429a66ca9c32fd31fbf478e1 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 82 98 2.4E-34 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SCD_RS03330 7fcb6ee1429a66ca9c32fd31fbf478e1 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 106 125 2.4E-34 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SCD_RS03330 7fcb6ee1429a66ca9c32fd31fbf478e1 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 137 149 2.4E-34 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SCD_RS03330 7fcb6ee1429a66ca9c32fd31fbf478e1 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 2.4E-34 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SCD_RS04355 d6e55fc183e7802d56faa8f1c0e635ab 370 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 368 8.5E-192 T 22-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SCD_RS04355 d6e55fc183e7802d56faa8f1c0e635ab 370 SUPERFAMILY SSF51735 1 147 1.05E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS04355 d6e55fc183e7802d56faa8f1c0e635ab 370 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 7.6E-22 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SCD_RS04355 d6e55fc183e7802d56faa8f1c0e635ab 370 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 145 354 7.4E-53 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SCD_RS04355 d6e55fc183e7802d56faa8f1c0e635ab 370 SUPERFAMILY SSF55347 134 355 8.04E-77 T 22-04-2016 SCD_RS04355 d6e55fc183e7802d56faa8f1c0e635ab 370 SMART SM00859 3 122 2.8E-29 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SCD_RS04355 d6e55fc183e7802d56faa8f1c0e635ab 370 PANTHER PTHR10174 201 370 9.2E-148 T 22-04-2016 SCD_RS04355 d6e55fc183e7802d56faa8f1c0e635ab 370 PANTHER PTHR10174 103 179 9.2E-148 T 22-04-2016 SCD_RS04355 d6e55fc183e7802d56faa8f1c0e635ab 370 Gene3D G3DSA:3.40.50.720 1 142 3.9E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS04355 d6e55fc183e7802d56faa8f1c0e635ab 370 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 368 32.918 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SCD_RS04355 d6e55fc183e7802d56faa8f1c0e635ab 370 PANTHER PTHR10174:SF116 201 370 9.2E-148 T 22-04-2016 SCD_RS04355 d6e55fc183e7802d56faa8f1c0e635ab 370 PANTHER PTHR10174:SF116 103 179 9.2E-148 T 22-04-2016 SCD_RS04355 d6e55fc183e7802d56faa8f1c0e635ab 370 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 22-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SCD_RS04355 d6e55fc183e7802d56faa8f1c0e635ab 370 Gene3D G3DSA:3.30.360.10 143 351 5.0E-73 T 22-04-2016 SCD_RS04355 d6e55fc183e7802d56faa8f1c0e635ab 370 PIRSF PIRSF000148 1 370 3.7E-65 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SCD_RS03815 996c73ac8cbec20a48f064c759606246 113 PANTHER PTHR34535:SF2 2 113 9.7E-42 T 22-04-2016 SCD_RS03815 996c73ac8cbec20a48f064c759606246 113 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 113 23.608 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SCD_RS03815 996c73ac8cbec20a48f064c759606246 113 PIRSF PIRSF004761 1 113 1.1E-34 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SCD_RS03815 996c73ac8cbec20a48f064c759606246 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 5.6E-31 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SCD_RS03815 996c73ac8cbec20a48f064c759606246 113 PANTHER PTHR34535 2 113 9.7E-42 T 22-04-2016 SCD_RS03815 996c73ac8cbec20a48f064c759606246 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 2.2E-28 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SCD_RS12365 c17443aa536169aa92c480fb654eb821 117 Pfam PF02021 Uncharacterised protein family UPF0102 11 99 1.2E-27 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 SCD_RS12365 c17443aa536169aa92c480fb654eb821 117 Gene3D G3DSA:3.40.1350.10 11 115 5.7E-36 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 SCD_RS12365 c17443aa536169aa92c480fb654eb821 117 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 6 115 1.7E-30 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 SCD_RS12365 c17443aa536169aa92c480fb654eb821 117 Hamap MF_00048 UPF0102 protein YraN [yraN]. 4 113 21.964 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 SCD_RS12365 c17443aa536169aa92c480fb654eb821 117 PANTHER PTHR34039 1 115 1.1E-35 T 22-04-2016 SCD_RS12365 c17443aa536169aa92c480fb654eb821 117 PANTHER PTHR34039:SF1 1 115 1.1E-35 T 22-04-2016 SCD_RS12365 c17443aa536169aa92c480fb654eb821 117 SUPERFAMILY SSF52980 11 100 7.51E-19 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SCD_RS00505 e2f777a237f7d0c489453b5e39149b9d 269 Gene3D G3DSA:3.30.70.1070 189 266 4.7E-14 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SCD_RS00505 e2f777a237f7d0c489453b5e39149b9d 269 SUPERFAMILY SSF50685 62 151 2.2E-8 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SCD_RS00505 e2f777a237f7d0c489453b5e39149b9d 269 SUPERFAMILY SSF110997 194 264 7.45E-12 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SCD_RS00505 e2f777a237f7d0c489453b5e39149b9d 269 PANTHER PTHR34183 12 269 4.6E-76 T 22-04-2016 SCD_RS00505 e2f777a237f7d0c489453b5e39149b9d 269 Pfam PF05036 Sporulation related domain 193 258 1.5E-12 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SCD_RS00505 e2f777a237f7d0c489453b5e39149b9d 269 Pfam PF03330 Lytic transglycolase 62 150 9.8E-24 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SCD_RS00505 e2f777a237f7d0c489453b5e39149b9d 269 PANTHER PTHR34183:SF1 12 269 4.6E-76 T 22-04-2016 SCD_RS00505 e2f777a237f7d0c489453b5e39149b9d 269 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 64 230 3.1E-40 T 22-04-2016 IPR012997 Rare lipoprotein A SCD_RS15645 576ca5a375761d89b76d610bf606f7ab 239 Pfam PF08238 Sel1 repeat 36 74 5.9E-5 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS15645 576ca5a375761d89b76d610bf606f7ab 239 Pfam PF08238 Sel1 repeat 113 145 4.2E-10 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS15645 576ca5a375761d89b76d610bf606f7ab 239 Pfam PF08238 Sel1 repeat 147 177 6.0E-5 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS15645 576ca5a375761d89b76d610bf606f7ab 239 Pfam PF08238 Sel1 repeat 75 110 8.1E-9 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS15645 576ca5a375761d89b76d610bf606f7ab 239 SUPERFAMILY SSF81901 34 179 3.75E-35 T 22-04-2016 SCD_RS15645 576ca5a375761d89b76d610bf606f7ab 239 Gene3D G3DSA:1.25.40.10 33 178 2.5E-42 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS15645 576ca5a375761d89b76d610bf606f7ab 239 PANTHER PTHR11102 33 177 5.6E-42 T 22-04-2016 SCD_RS15645 576ca5a375761d89b76d610bf606f7ab 239 SMART SM00671 111 146 4.9E-10 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS15645 576ca5a375761d89b76d610bf606f7ab 239 SMART SM00671 75 110 5.7E-9 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS15645 576ca5a375761d89b76d610bf606f7ab 239 SMART SM00671 33 74 2.1E-4 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS15645 576ca5a375761d89b76d610bf606f7ab 239 SMART SM00671 147 182 4.2E-4 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS01235 3df0bbdb43cbbfd7fe561eef7928cda0 284 Gene3D G3DSA:3.40.50.150 35 203 4.1E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS01235 3df0bbdb43cbbfd7fe561eef7928cda0 284 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 39 100 6.0E-5 T 22-04-2016 SCD_RS01235 3df0bbdb43cbbfd7fe561eef7928cda0 284 SUPERFAMILY SSF53335 33 150 5.82E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS01235 3df0bbdb43cbbfd7fe561eef7928cda0 284 SUPERFAMILY SSF53335 178 198 5.82E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS08965 73c881623985041e5289bc165581363c 259 SUPERFAMILY SSF81901 45 208 2.54E-23 T 22-04-2016 SCD_RS08965 73c881623985041e5289bc165581363c 259 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 14 245 3.1E-71 T 22-04-2016 IPR013360 Pilus biogenesis/stability type IV, PilW SCD_RS08965 73c881623985041e5289bc165581363c 259 Gene3D G3DSA:1.25.40.10 40 250 5.2E-34 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS08965 73c881623985041e5289bc165581363c 259 SMART SM00028 180 213 180.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS08965 73c881623985041e5289bc165581363c 259 SMART SM00028 146 179 0.27 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS08965 73c881623985041e5289bc165581363c 259 SMART SM00028 42 75 17.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS08965 73c881623985041e5289bc165581363c 259 SMART SM00028 76 109 1.6E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS08965 73c881623985041e5289bc165581363c 259 Pfam PF13414 TPR repeat 49 88 2.3E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS08965 73c881623985041e5289bc165581363c 259 Pfam PF13432 Tetratricopeptide repeat 169 203 0.0076 T 22-04-2016 SCD_RS08965 73c881623985041e5289bc165581363c 259 PANTHER PTHR23083 40 250 9.2E-32 T 22-04-2016 SCD_RS09525 af316902ac797c545f3e586b5af361b9 425 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 22 41 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SCD_RS09525 af316902ac797c545f3e586b5af361b9 425 Pfam PF00483 Nucleotidyl transferase 18 287 1.1E-68 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SCD_RS09525 af316902ac797c545f3e586b5af361b9 425 PANTHER PTHR22572 17 393 5.2E-172 T 22-04-2016 SCD_RS09525 af316902ac797c545f3e586b5af361b9 425 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 13 418 51.935 T 22-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SCD_RS09525 af316902ac797c545f3e586b5af361b9 425 SUPERFAMILY SSF53448 356 372 1.08E-80 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS09525 af316902ac797c545f3e586b5af361b9 425 SUPERFAMILY SSF53448 12 289 1.08E-80 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS09525 af316902ac797c545f3e586b5af361b9 425 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 207 217 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SCD_RS09525 af316902ac797c545f3e586b5af361b9 425 Gene3D G3DSA:3.90.550.10 17 296 8.8E-78 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS09525 af316902ac797c545f3e586b5af361b9 425 Gene3D G3DSA:3.90.550.10 339 382 8.8E-78 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS09525 af316902ac797c545f3e586b5af361b9 425 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 109 117 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SCD_RS09525 af316902ac797c545f3e586b5af361b9 425 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 17 392 2.2E-156 T 22-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SCD_RS09525 af316902ac797c545f3e586b5af361b9 425 SUPERFAMILY SSF51161 306 409 2.52E-17 T 22-04-2016 IPR011004 Trimeric LpxA-like SCD_RS09525 af316902ac797c545f3e586b5af361b9 425 PANTHER PTHR22572:SF10 17 393 5.2E-172 T 22-04-2016 SCD_RS08130 05f6c25dae4c0eedffdea67db360e1b9 96 SUPERFAMILY SSF160544 7 85 1.01E-23 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal SCD_RS08130 05f6c25dae4c0eedffdea67db360e1b9 96 PANTHER PTHR30531 1 95 1.6E-31 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SCD_RS08130 05f6c25dae4c0eedffdea67db360e1b9 96 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 81 1.0E-18 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SCD_RS08130 05f6c25dae4c0eedffdea67db360e1b9 96 Gene3D G3DSA:3.40.1690.10 8 85 1.3E-24 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal SCD_RS15930 f3a8a6888151d74a19e0b6f5594f0067 177 Gene3D G3DSA:3.40.50.150 36 135 1.0E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS15930 f3a8a6888151d74a19e0b6f5594f0067 177 Pfam PF08241 Methyltransferase domain 36 83 3.0E-5 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SCD_RS15930 f3a8a6888151d74a19e0b6f5594f0067 177 SUPERFAMILY SSF53335 36 137 1.19E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS06065 2b583a65a4b4efba0ae73edc1036bc59 388 SUPERFAMILY SSF47384 167 238 4.51E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS06065 2b583a65a4b4efba0ae73edc1036bc59 388 SMART SM00387 282 388 1.9E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS06065 2b583a65a4b4efba0ae73edc1036bc59 388 Gene3D G3DSA:1.10.287.130 168 235 2.5E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS06065 2b583a65a4b4efba0ae73edc1036bc59 388 Gene3D G3DSA:3.30.450.20 59 158 7.0E-8 T 22-04-2016 SCD_RS06065 2b583a65a4b4efba0ae73edc1036bc59 388 SUPERFAMILY SSF55874 239 387 6.02E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS06065 2b583a65a4b4efba0ae73edc1036bc59 388 PRINTS PR00344 Bacterial sensor protein C-terminal signature 349 367 8.4E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS06065 2b583a65a4b4efba0ae73edc1036bc59 388 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 386 8.4E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS06065 2b583a65a4b4efba0ae73edc1036bc59 388 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 348 8.4E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS06065 2b583a65a4b4efba0ae73edc1036bc59 388 PRINTS PR00344 Bacterial sensor protein C-terminal signature 320 334 8.4E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS06065 2b583a65a4b4efba0ae73edc1036bc59 388 Pfam PF13188 PAS domain 64 104 2.1E-6 T 22-04-2016 IPR000014 PAS domain SCD_RS06065 2b583a65a4b4efba0ae73edc1036bc59 388 SMART SM00388 174 240 7.4E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS06065 2b583a65a4b4efba0ae73edc1036bc59 388 SUPERFAMILY SSF55785 51 149 5.41E-8 T 22-04-2016 IPR000014 PAS domain SCD_RS06065 2b583a65a4b4efba0ae73edc1036bc59 388 PANTHER PTHR24423 51 387 1.7E-73 T 22-04-2016 SCD_RS06065 2b583a65a4b4efba0ae73edc1036bc59 388 Pfam PF00512 His Kinase A (phospho-acceptor) domain 175 239 2.9E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS06065 2b583a65a4b4efba0ae73edc1036bc59 388 Gene3D G3DSA:3.30.565.10 245 386 5.8E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS06065 2b583a65a4b4efba0ae73edc1036bc59 388 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 285 387 6.2E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS09410 37a674b0bdb719a67301a8692b08b501 393 Pfam PF13439 Glycosyltransferase Family 4 10 180 4.4E-30 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SCD_RS09410 37a674b0bdb719a67301a8692b08b501 393 Gene3D G3DSA:3.40.50.2000 171 354 1.3E-26 T 22-04-2016 SCD_RS09410 37a674b0bdb719a67301a8692b08b501 393 PANTHER PTHR12526:SF363 1 378 1.3E-73 T 22-04-2016 SCD_RS09410 37a674b0bdb719a67301a8692b08b501 393 Pfam PF00534 Glycosyl transferases group 1 191 355 3.4E-35 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SCD_RS09410 37a674b0bdb719a67301a8692b08b501 393 SUPERFAMILY SSF53756 1 375 4.19E-79 T 22-04-2016 SCD_RS09410 37a674b0bdb719a67301a8692b08b501 393 PANTHER PTHR12526 1 378 1.3E-73 T 22-04-2016 SCD_RS13030 8051ab6b6df178b03f5f99cb7c5edaa9 160 PANTHER PTHR21342:SF1 1 158 8.3E-73 T 22-04-2016 SCD_RS13030 8051ab6b6df178b03f5f99cb7c5edaa9 160 Gene3D G3DSA:3.40.50.620 4 157 9.5E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS13030 8051ab6b6df178b03f5f99cb7c5edaa9 160 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 64 1.3E-18 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SCD_RS13030 8051ab6b6df178b03f5f99cb7c5edaa9 160 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 9.2E-58 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SCD_RS13030 8051ab6b6df178b03f5f99cb7c5edaa9 160 Pfam PF01467 Cytidylyltransferase-like 6 134 3.9E-21 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SCD_RS13030 8051ab6b6df178b03f5f99cb7c5edaa9 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.8E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SCD_RS13030 8051ab6b6df178b03f5f99cb7c5edaa9 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.8E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SCD_RS13030 8051ab6b6df178b03f5f99cb7c5edaa9 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 1.8E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SCD_RS13030 8051ab6b6df178b03f5f99cb7c5edaa9 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 1.8E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SCD_RS13030 8051ab6b6df178b03f5f99cb7c5edaa9 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 1.8E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SCD_RS13030 8051ab6b6df178b03f5f99cb7c5edaa9 160 SUPERFAMILY SSF52374 4 155 1.56E-44 T 22-04-2016 SCD_RS13030 8051ab6b6df178b03f5f99cb7c5edaa9 160 PANTHER PTHR21342 1 158 8.3E-73 T 22-04-2016 SCD_RS13030 8051ab6b6df178b03f5f99cb7c5edaa9 160 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 34.274 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SCD_RS06155 05e084c1064d7c359a499d143874ce39 606 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 10 81 4.3E-8 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SCD_RS06155 05e084c1064d7c359a499d143874ce39 606 PANTHER PTHR11573 7 587 5.2E-210 T 22-04-2016 SCD_RS06155 05e084c1064d7c359a499d143874ce39 606 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 13 587 7.3E-176 T 22-04-2016 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS06155 05e084c1064d7c359a499d143874ce39 606 PANTHER PTHR11573:SF3 7 587 5.2E-210 T 22-04-2016 SCD_RS06155 05e084c1064d7c359a499d143874ce39 606 Pfam PF02867 Ribonucleotide reductase, barrel domain 87 577 4.5E-141 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS06155 05e084c1064d7c359a499d143874ce39 606 PRINTS PR01183 Ribonucleotide reductase large chain signature 363 385 1.9E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS06155 05e084c1064d7c359a499d143874ce39 606 PRINTS PR01183 Ribonucleotide reductase large chain signature 446 473 1.9E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS06155 05e084c1064d7c359a499d143874ce39 606 PRINTS PR01183 Ribonucleotide reductase large chain signature 162 181 1.9E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS06155 05e084c1064d7c359a499d143874ce39 606 PRINTS PR01183 Ribonucleotide reductase large chain signature 287 298 1.9E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS06155 05e084c1064d7c359a499d143874ce39 606 PRINTS PR01183 Ribonucleotide reductase large chain signature 391 414 1.9E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS06155 05e084c1064d7c359a499d143874ce39 606 PRINTS PR01183 Ribonucleotide reductase large chain signature 325 348 1.9E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SCD_RS06155 05e084c1064d7c359a499d143874ce39 606 Gene3D G3DSA:3.20.70.20 536 579 9.9E-145 T 22-04-2016 SCD_RS06155 05e084c1064d7c359a499d143874ce39 606 Gene3D G3DSA:3.20.70.20 446 492 9.9E-145 T 22-04-2016 SCD_RS06155 05e084c1064d7c359a499d143874ce39 606 Gene3D G3DSA:3.20.70.20 3 204 9.9E-145 T 22-04-2016 SCD_RS06155 05e084c1064d7c359a499d143874ce39 606 Gene3D G3DSA:3.20.70.20 253 411 9.9E-145 T 22-04-2016 SCD_RS06155 05e084c1064d7c359a499d143874ce39 606 SUPERFAMILY SSF51998 446 588 1.19E-165 T 22-04-2016 SCD_RS06155 05e084c1064d7c359a499d143874ce39 606 SUPERFAMILY SSF51998 3 204 1.19E-165 T 22-04-2016 SCD_RS06155 05e084c1064d7c359a499d143874ce39 606 SUPERFAMILY SSF51998 253 411 1.19E-165 T 22-04-2016 SCD_RS00215 ae9921c98b2983c223e52ed8c0ab0ce1 142 Pfam PF11008 Protein of unknown function (DUF2846) 16 117 4.3E-18 T 22-04-2016 IPR022548 Domain of unknown function DUF2846 SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 SUPERFAMILY SSF52374 3 199 3.29E-141 T 22-04-2016 SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 SUPERFAMILY SSF52374 413 661 3.29E-141 T 22-04-2016 SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 SUPERFAMILY SSF47323 665 937 1.1E-69 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 Gene3D G3DSA:1.10.730.10 655 801 3.9E-42 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 Pfam PF06827 Zinc finger found in FPG and IleRS 907 934 1.9E-6 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 854 9.4E-280 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 Gene3D G3DSA:3.90.740.10 204 399 3.5E-52 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 653 1.3E-220 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 Gene3D G3DSA:3.40.50.620 17 202 1.0E-137 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 Gene3D G3DSA:3.40.50.620 413 649 1.0E-137 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 PANTHER PTHR11946 293 915 0.0 T 22-04-2016 SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 PANTHER PTHR11946 6 212 0.0 T 22-04-2016 SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 PANTHER PTHR11946 245 270 0.0 T 22-04-2016 SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 937 21.332 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 249 272 7.2E-34 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 540 553 7.2E-34 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 411 426 7.2E-34 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 574 583 7.2E-34 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 7.2E-34 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 SUPERFAMILY SSF50677 245 413 1.88E-51 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 PANTHER PTHR11946:SF11 293 915 0.0 T 22-04-2016 SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 PANTHER PTHR11946:SF11 6 212 0.0 T 22-04-2016 SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 PANTHER PTHR11946:SF11 245 270 0.0 T 22-04-2016 SCD_RS10550 f4bad3afd0c3e8531233a9cee3d3c37a 946 Pfam PF08264 Anticodon-binding domain of tRNA 698 851 4.5E-24 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SCD_RS05770 f9bd5233a16f9134fff949d9be216716 569 PANTHER PTHR21666:SF206 428 472 3.9E-119 T 22-04-2016 SCD_RS05770 f9bd5233a16f9134fff949d9be216716 569 PANTHER PTHR21666:SF206 71 353 3.9E-119 T 22-04-2016 SCD_RS05770 f9bd5233a16f9134fff949d9be216716 569 PANTHER PTHR21666:SF206 496 564 3.9E-119 T 22-04-2016 SCD_RS05770 f9bd5233a16f9134fff949d9be216716 569 Gene3D G3DSA:3.10.350.10 350 394 3.7E-10 T 22-04-2016 IPR018392 LysM domain SCD_RS05770 f9bd5233a16f9134fff949d9be216716 569 Pfam PF01476 LysM domain 356 394 8.7E-5 T 22-04-2016 IPR018392 LysM domain SCD_RS05770 f9bd5233a16f9134fff949d9be216716 569 Pfam PF01476 LysM domain 521 562 1.0E-9 T 22-04-2016 IPR018392 LysM domain SCD_RS05770 f9bd5233a16f9134fff949d9be216716 569 Pfam PF01476 LysM domain 428 469 2.6E-12 T 22-04-2016 IPR018392 LysM domain SCD_RS05770 f9bd5233a16f9134fff949d9be216716 569 SUPERFAMILY SSF54106 426 469 7.06E-10 T 22-04-2016 IPR018392 LysM domain SCD_RS05770 f9bd5233a16f9134fff949d9be216716 569 Pfam PF01464 Transglycosylase SLT domain 128 230 9.0E-25 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 SCD_RS05770 f9bd5233a16f9134fff949d9be216716 569 Gene3D G3DSA:1.10.530.10 116 278 2.3E-47 T 22-04-2016 SCD_RS05770 f9bd5233a16f9134fff949d9be216716 569 SUPERFAMILY SSF54106 349 394 2.62E-6 T 22-04-2016 IPR018392 LysM domain SCD_RS05770 f9bd5233a16f9134fff949d9be216716 569 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 141 169 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 SCD_RS05770 f9bd5233a16f9134fff949d9be216716 569 SUPERFAMILY SSF54106 518 563 3.14E-9 T 22-04-2016 IPR018392 LysM domain SCD_RS05770 f9bd5233a16f9134fff949d9be216716 569 SUPERFAMILY SSF53955 121 279 3.8E-43 T 22-04-2016 IPR023346 Lysozyme-like domain SCD_RS05770 f9bd5233a16f9134fff949d9be216716 569 Gene3D G3DSA:3.10.350.10 427 469 1.3E-14 T 22-04-2016 IPR018392 LysM domain SCD_RS05770 f9bd5233a16f9134fff949d9be216716 569 Gene3D G3DSA:3.10.350.10 519 563 4.6E-14 T 22-04-2016 IPR018392 LysM domain SCD_RS05770 f9bd5233a16f9134fff949d9be216716 569 SMART SM00257 520 564 1.4E-7 T 22-04-2016 IPR018392 LysM domain SCD_RS05770 f9bd5233a16f9134fff949d9be216716 569 SMART SM00257 427 470 2.3E-12 T 22-04-2016 IPR018392 LysM domain SCD_RS05770 f9bd5233a16f9134fff949d9be216716 569 SMART SM00257 350 394 0.023 T 22-04-2016 IPR018392 LysM domain SCD_RS05770 f9bd5233a16f9134fff949d9be216716 569 PANTHER PTHR21666 428 472 3.9E-119 T 22-04-2016 SCD_RS05770 f9bd5233a16f9134fff949d9be216716 569 PANTHER PTHR21666 71 353 3.9E-119 T 22-04-2016 SCD_RS05770 f9bd5233a16f9134fff949d9be216716 569 PANTHER PTHR21666 496 564 3.9E-119 T 22-04-2016 SCD_RS00980 6e5efe7225ffa1b8d506fca04699a9db 205 PANTHER PTHR24567 1 198 9.2E-38 T 22-04-2016 SCD_RS00980 6e5efe7225ffa1b8d506fca04699a9db 205 SUPERFAMILY SSF51206 1 124 1.96E-27 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like SCD_RS00980 6e5efe7225ffa1b8d506fca04699a9db 205 Pfam PF00027 Cyclic nucleotide-binding domain 11 97 1.0E-16 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SCD_RS00980 6e5efe7225ffa1b8d506fca04699a9db 205 PANTHER PTHR24567:SF30 1 198 9.2E-38 T 22-04-2016 SCD_RS00980 6e5efe7225ffa1b8d506fca04699a9db 205 Gene3D G3DSA:1.10.10.10 129 201 3.2E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS00980 6e5efe7225ffa1b8d506fca04699a9db 205 SMART SM00100 1 109 3.7E-6 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SCD_RS00980 6e5efe7225ffa1b8d506fca04699a9db 205 Pfam PF13545 Crp-like helix-turn-helix domain 129 198 1.2E-13 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SCD_RS00980 6e5efe7225ffa1b8d506fca04699a9db 205 Gene3D G3DSA:2.60.120.10 1 124 5.8E-27 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SCD_RS00980 6e5efe7225ffa1b8d506fca04699a9db 205 SMART SM00419 145 193 1.6E-8 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SCD_RS00980 6e5efe7225ffa1b8d506fca04699a9db 205 SUPERFAMILY SSF46785 128 201 2.52E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS13310 e363eb5c0594fbf6b4fe180dee381e0e 139 PRINTS PR00421 Thioredoxin family signature 64 73 1.8E-9 T 22-04-2016 SCD_RS13310 e363eb5c0594fbf6b4fe180dee381e0e 139 PRINTS PR00421 Thioredoxin family signature 56 64 1.8E-9 T 22-04-2016 SCD_RS13310 e363eb5c0594fbf6b4fe180dee381e0e 139 PRINTS PR00421 Thioredoxin family signature 104 115 1.8E-9 T 22-04-2016 SCD_RS13310 e363eb5c0594fbf6b4fe180dee381e0e 139 ProSitePatterns PS00194 Thioredoxin family active site. 57 75 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SCD_RS13310 e363eb5c0594fbf6b4fe180dee381e0e 139 Pfam PF00085 Thioredoxin 39 138 3.5E-31 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 SCD_RS13310 e363eb5c0594fbf6b4fe180dee381e0e 139 TIGRFAM TIGR01068 thioredoxin: thioredoxin 43 137 3.1E-36 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SCD_RS13310 e363eb5c0594fbf6b4fe180dee381e0e 139 Gene3D G3DSA:3.40.30.10 34 138 3.1E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS13310 e363eb5c0594fbf6b4fe180dee381e0e 139 PANTHER PTHR10438 25 139 9.0E-42 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SCD_RS13310 e363eb5c0594fbf6b4fe180dee381e0e 139 SUPERFAMILY SSF52833 23 138 2.87E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS13310 e363eb5c0594fbf6b4fe180dee381e0e 139 PANTHER PTHR10438:SF266 25 139 9.0E-42 T 22-04-2016 SCD_RS10805 c3134ab2a77686734b58434148984ca8 391 Gene3D G3DSA:3.40.640.10 48 292 2.6E-87 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS10805 c3134ab2a77686734b58434148984ca8 391 PANTHER PTHR11986 8 391 7.3E-165 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SCD_RS10805 c3134ab2a77686734b58434148984ca8 391 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 1 385 46.108 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 SCD_RS10805 c3134ab2a77686734b58434148984ca8 391 SUPERFAMILY SSF53383 3 385 3.34E-127 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS10805 c3134ab2a77686734b58434148984ca8 391 PANTHER PTHR11986:SF79 8 391 7.3E-165 T 22-04-2016 SCD_RS10805 c3134ab2a77686734b58434148984ca8 391 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 4 384 2.1E-147 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 SCD_RS10805 c3134ab2a77686734b58434148984ca8 391 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 211 248 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SCD_RS10805 c3134ab2a77686734b58434148984ca8 391 Pfam PF00202 Aminotransferase class-III 10 381 9.7E-121 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SCD_RS10805 c3134ab2a77686734b58434148984ca8 391 Gene3D G3DSA:3.90.1150.10 295 385 2.8E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS10805 c3134ab2a77686734b58434148984ca8 391 Gene3D G3DSA:3.90.1150.10 2 47 2.8E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS13355 32e80e0180ee20e665a2bc1af0fb9f8d 477 PANTHER PTHR32060 58 278 4.5E-117 T 22-04-2016 SCD_RS13355 32e80e0180ee20e665a2bc1af0fb9f8d 477 PANTHER PTHR32060 295 459 4.5E-117 T 22-04-2016 SCD_RS13355 32e80e0180ee20e665a2bc1af0fb9f8d 477 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 55 395 2.2E-100 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 SCD_RS13355 32e80e0180ee20e665a2bc1af0fb9f8d 477 SMART SM00228 103 174 3.6E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS13355 32e80e0180ee20e665a2bc1af0fb9f8d 477 Gene3D G3DSA:2.30.42.10 109 186 1.1E-27 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS13355 32e80e0180ee20e665a2bc1af0fb9f8d 477 Pfam PF13180 PDZ domain 103 180 1.0E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS13355 32e80e0180ee20e665a2bc1af0fb9f8d 477 Gene3D G3DSA:3.30.750.44 57 108 4.2E-9 T 22-04-2016 SCD_RS13355 32e80e0180ee20e665a2bc1af0fb9f8d 477 Gene3D G3DSA:3.90.226.10 450 471 6.3E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SCD_RS13355 32e80e0180ee20e665a2bc1af0fb9f8d 477 Gene3D G3DSA:3.90.226.10 187 387 6.3E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SCD_RS13355 32e80e0180ee20e665a2bc1af0fb9f8d 477 SUPERFAMILY SSF50156 94 186 1.21E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS13355 32e80e0180ee20e665a2bc1af0fb9f8d 477 SMART SM00245 176 385 1.4E-68 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SCD_RS13355 32e80e0180ee20e665a2bc1af0fb9f8d 477 SUPERFAMILY SSF52096 40 121 2.65E-80 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SCD_RS13355 32e80e0180ee20e665a2bc1af0fb9f8d 477 SUPERFAMILY SSF52096 195 389 2.65E-80 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SCD_RS13355 32e80e0180ee20e665a2bc1af0fb9f8d 477 Pfam PF03572 Peptidase family S41 202 384 2.9E-56 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SCD_RS09170 43a0615558cf9006cbc8096267e05a8c 423 Pfam PF02321 Outer membrane efflux protein 33 218 1.3E-13 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SCD_RS09170 43a0615558cf9006cbc8096267e05a8c 423 Pfam PF02321 Outer membrane efflux protein 246 420 5.3E-20 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SCD_RS09170 43a0615558cf9006cbc8096267e05a8c 423 PANTHER PTHR30203:SF1 32 423 7.5E-36 T 22-04-2016 SCD_RS09170 43a0615558cf9006cbc8096267e05a8c 423 PANTHER PTHR30203 32 423 7.5E-36 T 22-04-2016 SCD_RS09170 43a0615558cf9006cbc8096267e05a8c 423 Gene3D G3DSA:1.20.1600.10 31 420 3.1E-50 T 22-04-2016 SCD_RS09170 43a0615558cf9006cbc8096267e05a8c 423 SUPERFAMILY SSF56954 4 422 3.66E-63 T 22-04-2016 SCD_RS11620 aeefebb9ce26af067a14c77f69f6caab 214 Gene3D G3DSA:1.25.10.10 114 211 3.7E-10 T 22-04-2016 IPR011989 Armadillo-like helical SCD_RS11620 aeefebb9ce26af067a14c77f69f6caab 214 Pfam PF13192 Thioredoxin domain 13 81 1.2E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS11620 aeefebb9ce26af067a14c77f69f6caab 214 SUPERFAMILY SSF48371 103 211 1.07E-10 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 SCD_RS11620 aeefebb9ce26af067a14c77f69f6caab 214 Pfam PF13646 HEAT repeats 143 208 4.1E-7 T 22-04-2016 SCD_RS11620 aeefebb9ce26af067a14c77f69f6caab 214 SUPERFAMILY SSF52833 12 84 3.87E-8 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS11620 aeefebb9ce26af067a14c77f69f6caab 214 Gene3D G3DSA:3.40.30.10 11 82 1.1E-7 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS01910 ac7fa74a81333477889bac8561bcc195 682 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 137 668 2.5E-171 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SCD_RS01910 ac7fa74a81333477889bac8561bcc195 682 Gene3D G3DSA:3.20.70.20 142 669 2.4E-197 T 22-04-2016 SCD_RS01910 ac7fa74a81333477889bac8561bcc195 682 PANTHER PTHR21075 10 669 2.4E-219 T 22-04-2016 SCD_RS01910 ac7fa74a81333477889bac8561bcc195 682 SUPERFAMILY SSF51998 137 669 4.58E-154 T 22-04-2016 SCD_RS01910 ac7fa74a81333477889bac8561bcc195 682 Pfam PF03477 ATP cone domain 20 107 4.7E-20 T 22-04-2016 IPR005144 ATP-cone domain SCD_RS01910 ac7fa74a81333477889bac8561bcc195 682 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 136 669 1.7E-139 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SCD_RS11145 db138fb0f208bfcff2f0a6acdbfb18a5 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 460 2.6E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS11145 db138fb0f208bfcff2f0a6acdbfb18a5 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 309 8.3E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS11145 db138fb0f208bfcff2f0a6acdbfb18a5 464 SMART SM00304 189 242 5.9E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS11145 db138fb0f208bfcff2f0a6acdbfb18a5 464 Gene3D G3DSA:3.30.565.10 297 461 2.1E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS11145 db138fb0f208bfcff2f0a6acdbfb18a5 464 SUPERFAMILY SSF47384 226 309 1.29E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS11145 db138fb0f208bfcff2f0a6acdbfb18a5 464 Gene3D G3DSA:1.10.287.130 233 296 9.2E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS11145 db138fb0f208bfcff2f0a6acdbfb18a5 464 PANTHER PTHR24423 42 48 2.2E-113 T 22-04-2016 SCD_RS11145 db138fb0f208bfcff2f0a6acdbfb18a5 464 PANTHER PTHR24423 69 134 2.2E-113 T 22-04-2016 SCD_RS11145 db138fb0f208bfcff2f0a6acdbfb18a5 464 PANTHER PTHR24423 183 461 2.2E-113 T 22-04-2016 SCD_RS11145 db138fb0f208bfcff2f0a6acdbfb18a5 464 SMART SM00388 243 309 2.4E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS11145 db138fb0f208bfcff2f0a6acdbfb18a5 464 SUPERFAMILY SSF55874 299 461 3.14E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS11145 db138fb0f208bfcff2f0a6acdbfb18a5 464 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 4 460 7.8E-159 T 22-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 SCD_RS11145 db138fb0f208bfcff2f0a6acdbfb18a5 464 SMART SM00387 352 463 3.0E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS11145 db138fb0f208bfcff2f0a6acdbfb18a5 464 Pfam PF00672 HAMP domain 170 238 8.9E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS11145 db138fb0f208bfcff2f0a6acdbfb18a5 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 1.8E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS11145 db138fb0f208bfcff2f0a6acdbfb18a5 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 460 1.8E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS11145 db138fb0f208bfcff2f0a6acdbfb18a5 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 1.8E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS11145 db138fb0f208bfcff2f0a6acdbfb18a5 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 1.8E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS11145 db138fb0f208bfcff2f0a6acdbfb18a5 464 PANTHER PTHR24423:SF354 42 48 2.2E-113 T 22-04-2016 SCD_RS11145 db138fb0f208bfcff2f0a6acdbfb18a5 464 PANTHER PTHR24423:SF354 69 134 2.2E-113 T 22-04-2016 SCD_RS11145 db138fb0f208bfcff2f0a6acdbfb18a5 464 PANTHER PTHR24423:SF354 183 461 2.2E-113 T 22-04-2016 SCD_RS05375 f8bc05a5c350aa2ad30a2831968dfa99 244 SUPERFAMILY SSF52540 64 228 5.88E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05375 f8bc05a5c350aa2ad30a2831968dfa99 244 PIRSF PIRSF003073 1 244 1.4E-69 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein SCD_RS05375 f8bc05a5c350aa2ad30a2831968dfa99 244 PANTHER PTHR30050 3 241 5.1E-68 T 22-04-2016 SCD_RS05375 f8bc05a5c350aa2ad30a2831968dfa99 244 PANTHER PTHR30050:SF6 3 241 5.1E-68 T 22-04-2016 SCD_RS05375 f8bc05a5c350aa2ad30a2831968dfa99 244 Pfam PF01695 IstB-like ATP binding protein 53 227 3.3E-62 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 SCD_RS05375 f8bc05a5c350aa2ad30a2831968dfa99 244 SMART SM00382 96 228 5.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS05375 f8bc05a5c350aa2ad30a2831968dfa99 244 Gene3D G3DSA:3.40.50.300 84 225 3.9E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS10190 fad79b60cf80e41a60ef6450a8e395f7 497 SUPERFAMILY SSF63380 263 359 5.21E-14 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SCD_RS10190 fad79b60cf80e41a60ef6450a8e395f7 497 Gene3D G3DSA:3.10.20.30 162 250 1.5E-23 T 22-04-2016 IPR012675 Beta-grasp domain SCD_RS10190 fad79b60cf80e41a60ef6450a8e395f7 497 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 198 206 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SCD_RS10190 fad79b60cf80e41a60ef6450a8e395f7 497 Gene3D G3DSA:2.40.30.10 264 360 1.4E-17 T 22-04-2016 SCD_RS10190 fad79b60cf80e41a60ef6450a8e395f7 497 Pfam PF00175 Oxidoreductase NAD-binding domain 370 478 1.7E-6 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SCD_RS10190 fad79b60cf80e41a60ef6450a8e395f7 497 PRINTS PR00410 Phenol hydroxylase reductase family signature 353 362 4.8E-8 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SCD_RS10190 fad79b60cf80e41a60ef6450a8e395f7 497 PRINTS PR00410 Phenol hydroxylase reductase family signature 369 388 4.8E-8 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SCD_RS10190 fad79b60cf80e41a60ef6450a8e395f7 497 PRINTS PR00410 Phenol hydroxylase reductase family signature 293 305 4.8E-8 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SCD_RS10190 fad79b60cf80e41a60ef6450a8e395f7 497 SUPERFAMILY SSF52343 349 491 1.11E-21 T 22-04-2016 SCD_RS10190 fad79b60cf80e41a60ef6450a8e395f7 497 Pfam PF00970 Oxidoreductase FAD-binding domain 267 358 3.5E-6 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain SCD_RS10190 fad79b60cf80e41a60ef6450a8e395f7 497 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 167 238 1.0E-10 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SCD_RS10190 fad79b60cf80e41a60ef6450a8e395f7 497 SUPERFAMILY SSF54292 155 250 3.41E-22 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SCD_RS10190 fad79b60cf80e41a60ef6450a8e395f7 497 Gene3D G3DSA:3.40.50.80 362 491 4.7E-20 T 22-04-2016 SCD_RS10190 fad79b60cf80e41a60ef6450a8e395f7 497 PANTHER PTHR19370:SF68 198 490 3.4E-35 T 22-04-2016 SCD_RS10190 fad79b60cf80e41a60ef6450a8e395f7 497 PANTHER PTHR19370 198 490 3.4E-35 T 22-04-2016 SCD_RS00775 b350a8b8300d6af288877215da8391b6 303 SUPERFAMILY SSF52540 3 224 9.69E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00775 b350a8b8300d6af288877215da8391b6 303 PANTHER PTHR24220 5 236 7.8E-98 T 22-04-2016 SCD_RS00775 b350a8b8300d6af288877215da8391b6 303 PANTHER PTHR24220:SF165 5 236 7.8E-98 T 22-04-2016 SCD_RS00775 b350a8b8300d6af288877215da8391b6 303 Pfam PF00005 ABC transporter 21 162 6.3E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS00775 b350a8b8300d6af288877215da8391b6 303 Gene3D G3DSA:3.40.50.300 2 231 1.2E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00775 b350a8b8300d6af288877215da8391b6 303 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS00775 b350a8b8300d6af288877215da8391b6 303 SMART SM00382 28 211 4.1E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS13985 5c5e55c71868f04b950f05034b94c733 561 Gene3D G3DSA:2.60.120.200 124 303 3.0E-16 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SCD_RS13985 5c5e55c71868f04b950f05034b94c733 561 SUPERFAMILY SSF49899 141 308 3.63E-20 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SCD_RS13985 5c5e55c71868f04b950f05034b94c733 561 PANTHER PTHR30625 287 557 6.3E-69 T 22-04-2016 SCD_RS13985 5c5e55c71868f04b950f05034b94c733 561 Pfam PF10102 Domain of unknown function (DUF2341) 73 154 6.1E-17 T 22-04-2016 IPR018765 Domain of unknown function DUF2341 SCD_RS13985 5c5e55c71868f04b950f05034b94c733 561 PANTHER PTHR30625:SF3 287 557 6.3E-69 T 22-04-2016 SCD_RS13985 5c5e55c71868f04b950f05034b94c733 561 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 182 305 3.9E-13 T 22-04-2016 SCD_RS13985 5c5e55c71868f04b950f05034b94c733 561 Pfam PF01618 MotA/TolQ/ExbB proton channel family 441 544 2.5E-28 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SCD_RS05470 67b61f0f3f30dc51999dd839bc7bfaee 728 SUPERFAMILY SSF109604 20 209 5.96E-46 T 22-04-2016 SCD_RS05470 67b61f0f3f30dc51999dd839bc7bfaee 728 PANTHER PTHR21262 54 728 1.9E-298 T 22-04-2016 SCD_RS05470 67b61f0f3f30dc51999dd839bc7bfaee 728 Pfam PF02824 TGS domain 405 464 4.4E-22 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 SCD_RS05470 67b61f0f3f30dc51999dd839bc7bfaee 728 SUPERFAMILY SSF55021 652 726 6.87E-12 T 22-04-2016 SCD_RS05470 67b61f0f3f30dc51999dd839bc7bfaee 728 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 58 722 4.8E-197 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 SCD_RS05470 67b61f0f3f30dc51999dd839bc7bfaee 728 SUPERFAMILY SSF81271 394 464 7.19E-21 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SCD_RS05470 67b61f0f3f30dc51999dd839bc7bfaee 728 Pfam PF13328 HD domain 46 194 1.3E-43 T 22-04-2016 IPR003607 HD/PDEase domain SCD_RS05470 67b61f0f3f30dc51999dd839bc7bfaee 728 SMART SM00954 253 363 3.0E-67 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 SCD_RS05470 67b61f0f3f30dc51999dd839bc7bfaee 728 SUPERFAMILY SSF81301 198 409 1.8E-65 T 22-04-2016 SCD_RS05470 67b61f0f3f30dc51999dd839bc7bfaee 728 Gene3D G3DSA:3.10.20.30 405 466 2.0E-24 T 22-04-2016 IPR012675 Beta-grasp domain SCD_RS05470 67b61f0f3f30dc51999dd839bc7bfaee 728 Pfam PF13291 ACT domain 651 726 4.5E-19 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SCD_RS05470 67b61f0f3f30dc51999dd839bc7bfaee 728 Gene3D G3DSA:3.30.70.260 652 721 1.3E-15 T 22-04-2016 SCD_RS05470 67b61f0f3f30dc51999dd839bc7bfaee 728 Gene3D G3DSA:3.30.460.10 195 342 1.4E-52 T 22-04-2016 SCD_RS05470 67b61f0f3f30dc51999dd839bc7bfaee 728 PANTHER PTHR21262:SF5 54 728 1.9E-298 T 22-04-2016 SCD_RS05470 67b61f0f3f30dc51999dd839bc7bfaee 728 Pfam PF04607 Region found in RelA / SpoT proteins 253 362 2.2E-38 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 SCD_RS04515 fe1b869f1b7d2beac18cd9dd12d3addb 339 PIRSF PIRSF005485 1 339 3.1E-109 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 SCD_RS04515 fe1b869f1b7d2beac18cd9dd12d3addb 339 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 335 1.8E-98 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 SCD_RS04515 fe1b869f1b7d2beac18cd9dd12d3addb 339 Gene3D G3DSA:3.30.450.40 175 337 4.5E-41 T 22-04-2016 IPR029016 GAF domain-like SCD_RS04515 fe1b869f1b7d2beac18cd9dd12d3addb 339 Pfam PF01628 HrcA protein C terminal domain 103 322 5.1E-59 T 22-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 SCD_RS04515 fe1b869f1b7d2beac18cd9dd12d3addb 339 SUPERFAMILY SSF46785 1 83 2.89E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS04515 fe1b869f1b7d2beac18cd9dd12d3addb 339 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 329 28.155 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 SCD_RS04515 fe1b869f1b7d2beac18cd9dd12d3addb 339 PANTHER PTHR34824 1 337 1.7E-103 T 22-04-2016 SCD_RS04515 fe1b869f1b7d2beac18cd9dd12d3addb 339 SUPERFAMILY SSF55781 71 337 1.45E-62 T 22-04-2016 IPR029016 GAF domain-like SCD_RS04515 fe1b869f1b7d2beac18cd9dd12d3addb 339 Gene3D G3DSA:1.10.10.10 1 83 7.6E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS06085 51100a5d5d72a28ee55d7983118a7b0a 330 Pfam PF01706 FliG C-terminal domain 216 321 7.5E-43 T 22-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal SCD_RS06085 51100a5d5d72a28ee55d7983118a7b0a 330 Pfam PF14842 FliG N-terminal domain 5 101 5.8E-29 T 22-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain SCD_RS06085 51100a5d5d72a28ee55d7983118a7b0a 330 PIRSF PIRSF003161 2 330 8.0E-120 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SCD_RS06085 51100a5d5d72a28ee55d7983118a7b0a 330 PANTHER PTHR30534 5 330 2.4E-110 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SCD_RS06085 51100a5d5d72a28ee55d7983118a7b0a 330 Gene3D G3DSA:1.10.220.30 2 61 2.1E-14 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SCD_RS06085 51100a5d5d72a28ee55d7983118a7b0a 330 SUPERFAMILY SSF48029 3 115 1.28E-21 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SCD_RS06085 51100a5d5d72a28ee55d7983118a7b0a 330 PANTHER PTHR30534:SF0 5 330 2.4E-110 T 22-04-2016 SCD_RS06085 51100a5d5d72a28ee55d7983118a7b0a 330 Gene3D G3DSA:1.10.220.30 71 183 9.4E-32 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SCD_RS06085 51100a5d5d72a28ee55d7983118a7b0a 330 Gene3D G3DSA:1.10.220.30 192 329 3.2E-43 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SCD_RS06085 51100a5d5d72a28ee55d7983118a7b0a 330 SUPERFAMILY SSF48029 114 322 3.92E-69 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SCD_RS06085 51100a5d5d72a28ee55d7983118a7b0a 330 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 7 327 9.2E-115 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SCD_RS06085 51100a5d5d72a28ee55d7983118a7b0a 330 Pfam PF14841 FliG middle domain 114 185 3.5E-27 T 22-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain SCD_RS06085 51100a5d5d72a28ee55d7983118a7b0a 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 269 295 1.2E-65 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SCD_RS06085 51100a5d5d72a28ee55d7983118a7b0a 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 192 217 1.2E-65 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SCD_RS06085 51100a5d5d72a28ee55d7983118a7b0a 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 3 19 1.2E-65 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SCD_RS06085 51100a5d5d72a28ee55d7983118a7b0a 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 223 243 1.2E-65 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SCD_RS06085 51100a5d5d72a28ee55d7983118a7b0a 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 111 134 1.2E-65 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SCD_RS06085 51100a5d5d72a28ee55d7983118a7b0a 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 245 265 1.2E-65 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SCD_RS06085 51100a5d5d72a28ee55d7983118a7b0a 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 32 58 1.2E-65 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SCD_RS03640 6dec920bdf2ce3b44c2a99c5e1247c96 483 PANTHER PTHR22726:SF9 23 350 4.7E-78 T 22-04-2016 SCD_RS03640 6dec920bdf2ce3b44c2a99c5e1247c96 483 Gene3D G3DSA:3.30.2010.10 61 141 1.3E-20 T 22-04-2016 SCD_RS03640 6dec920bdf2ce3b44c2a99c5e1247c96 483 PANTHER PTHR22726 23 350 4.7E-78 T 22-04-2016 SCD_RS03640 6dec920bdf2ce3b44c2a99c5e1247c96 483 Pfam PF01435 Peptidase family M48 64 252 2.8E-37 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SCD_RS11180 f9fe8b8c02cf123116bbdd9020b0939d 417 SUPERFAMILY SSF53850 47 285 3.26E-27 T 22-04-2016 SCD_RS11180 f9fe8b8c02cf123116bbdd9020b0939d 417 Pfam PF13379 NMT1-like family 43 292 2.4E-107 T 22-04-2016 SCD_RS11180 f9fe8b8c02cf123116bbdd9020b0939d 417 Gene3D G3DSA:3.40.190.10 172 270 7.5E-7 T 22-04-2016 SCD_RS11180 f9fe8b8c02cf123116bbdd9020b0939d 417 PANTHER PTHR30024 10 417 2.1E-138 T 22-04-2016 SCD_RS11180 f9fe8b8c02cf123116bbdd9020b0939d 417 PANTHER PTHR30024:SF7 10 417 2.1E-138 T 22-04-2016 SCD_RS03265 cabbe8bcc029bac123bde863b9ac1014 117 PANTHER PTHR30041:SF4 6 117 2.6E-40 T 22-04-2016 SCD_RS03265 cabbe8bcc029bac123bde863b9ac1014 117 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 6 117 3.3E-41 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 SCD_RS03265 cabbe8bcc029bac123bde863b9ac1014 117 Gene3D G3DSA:3.40.30.10 6 117 5.0E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS03265 cabbe8bcc029bac123bde863b9ac1014 117 SUPERFAMILY SSF52833 6 117 2.13E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS03265 cabbe8bcc029bac123bde863b9ac1014 117 PANTHER PTHR30041 6 117 2.6E-40 T 22-04-2016 SCD_RS03265 cabbe8bcc029bac123bde863b9ac1014 117 Pfam PF03960 ArsC family 9 115 2.9E-13 T 22-04-2016 IPR006660 Arsenate reductase-like SCD_RS02995 3000830518f82fb0a424927dd933478a 237 PRINTS PR00603 Cytochrome C1 signature 183 202 6.0E-7 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 SCD_RS02995 3000830518f82fb0a424927dd933478a 237 PRINTS PR00603 Cytochrome C1 signature 102 126 6.0E-7 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 SCD_RS02995 3000830518f82fb0a424927dd933478a 237 PRINTS PR00603 Cytochrome C1 signature 41 60 6.0E-7 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 SCD_RS02995 3000830518f82fb0a424927dd933478a 237 PRINTS PR00603 Cytochrome C1 signature 202 217 6.0E-7 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 SCD_RS02995 3000830518f82fb0a424927dd933478a 237 PANTHER PTHR10266 180 237 4.3E-54 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 SCD_RS02995 3000830518f82fb0a424927dd933478a 237 PANTHER PTHR10266 4 159 4.3E-54 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 SCD_RS02995 3000830518f82fb0a424927dd933478a 237 SUPERFAMILY SSF46626 22 201 3.47E-54 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS02995 3000830518f82fb0a424927dd933478a 237 Gene3D G3DSA:1.20.5.100 206 237 1.7E-9 T 22-04-2016 SCD_RS02995 3000830518f82fb0a424927dd933478a 237 Pfam PF02167 Cytochrome C1 family 30 235 1.1E-20 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 SCD_RS02995 3000830518f82fb0a424927dd933478a 237 PANTHER PTHR10266:SF3 180 237 4.3E-54 T 22-04-2016 SCD_RS02995 3000830518f82fb0a424927dd933478a 237 PANTHER PTHR10266:SF3 4 159 4.3E-54 T 22-04-2016 SCD_RS02995 3000830518f82fb0a424927dd933478a 237 Gene3D G3DSA:1.10.760.10 18 202 5.5E-70 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS04535 b2a57e365c57fee34beb229906fb6c67 550 Gene3D G3DSA:3.40.50.300 428 502 4.4E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04535 b2a57e365c57fee34beb229906fb6c67 550 PIRSF PIRSF003128 1 550 5.5E-153 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SCD_RS04535 b2a57e365c57fee34beb229906fb6c67 550 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 548 2.2E-153 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SCD_RS04535 b2a57e365c57fee34beb229906fb6c67 550 PANTHER PTHR11059 2 548 4.6E-156 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SCD_RS04535 b2a57e365c57fee34beb229906fb6c67 550 SUPERFAMILY SSF52540 1 218 7.68E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04535 b2a57e365c57fee34beb229906fb6c67 550 Pfam PF02463 RecF/RecN/SMC N terminal domain 5 504 1.6E-16 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal SCD_RS04535 b2a57e365c57fee34beb229906fb6c67 550 Gene3D G3DSA:3.40.50.300 1 204 2.3E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04535 b2a57e365c57fee34beb229906fb6c67 550 SUPERFAMILY SSF52540 2 50 6.97E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04535 b2a57e365c57fee34beb229906fb6c67 550 SUPERFAMILY SSF52540 338 504 6.97E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11310 7976be7b7158def74d0a633812efdd33 258 PANTHER PTHR32071:SF39 1 144 6.8E-31 T 22-04-2016 SCD_RS11310 7976be7b7158def74d0a633812efdd33 258 Gene3D G3DSA:3.40.50.2300 4 138 5.0E-33 T 22-04-2016 SCD_RS11310 7976be7b7158def74d0a633812efdd33 258 PANTHER PTHR32071 1 144 6.8E-31 T 22-04-2016 SCD_RS11310 7976be7b7158def74d0a633812efdd33 258 SMART SM00448 3 115 4.5E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS11310 7976be7b7158def74d0a633812efdd33 258 SUPERFAMILY SSF55785 152 209 1.97E-5 T 22-04-2016 IPR000014 PAS domain SCD_RS11310 7976be7b7158def74d0a633812efdd33 258 Gene3D G3DSA:3.30.450.20 155 206 1.7E-5 T 22-04-2016 SCD_RS11310 7976be7b7158def74d0a633812efdd33 258 SUPERFAMILY SSF52172 3 155 4.7E-35 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS11310 7976be7b7158def74d0a633812efdd33 258 Pfam PF00072 Response regulator receiver domain 5 115 4.1E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS11815 fc366f05ced742ed0db91edf1fbe5f2e 295 SUPERFAMILY SSF53448 3 249 2.06E-40 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS11815 fc366f05ced742ed0db91edf1fbe5f2e 295 PANTHER PTHR10859 6 292 5.3E-60 T 22-04-2016 SCD_RS11815 fc366f05ced742ed0db91edf1fbe5f2e 295 PANTHER PTHR10859:SF84 6 292 5.3E-60 T 22-04-2016 SCD_RS11815 fc366f05ced742ed0db91edf1fbe5f2e 295 Pfam PF00535 Glycosyl transferase family 2 7 128 1.3E-25 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SCD_RS11815 fc366f05ced742ed0db91edf1fbe5f2e 295 Gene3D G3DSA:3.90.550.10 3 184 8.3E-22 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS08735 9e85b8f6a9a1f5f85948b9d5a4b74939 295 Gene3D G3DSA:3.40.1090.10 38 206 6.3E-17 T 22-04-2016 SCD_RS08735 9e85b8f6a9a1f5f85948b9d5a4b74939 295 PANTHER PTHR14226:SF24 38 292 2.1E-76 T 22-04-2016 SCD_RS08735 9e85b8f6a9a1f5f85948b9d5a4b74939 295 PANTHER PTHR14226 38 292 2.1E-76 T 22-04-2016 SCD_RS08735 9e85b8f6a9a1f5f85948b9d5a4b74939 295 SUPERFAMILY SSF52151 37 288 3.14E-56 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SCD_RS08735 9e85b8f6a9a1f5f85948b9d5a4b74939 295 Pfam PF01734 Patatin-like phospholipase 42 200 1.7E-29 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 SCD_RS06970 390feca2eac21d6f4b16932663194aca 242 TIGRFAM TIGR00613 reco: DNA repair protein RecO 16 173 3.1E-28 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SCD_RS06970 390feca2eac21d6f4b16932663194aca 242 Pfam PF11967 Recombination protein O N terminal 12 81 4.9E-22 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal SCD_RS06970 390feca2eac21d6f4b16932663194aca 242 PANTHER PTHR33991 8 242 1.0E-44 T 22-04-2016 SCD_RS06970 390feca2eac21d6f4b16932663194aca 242 SUPERFAMILY SSF50249 12 82 2.06E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS06970 390feca2eac21d6f4b16932663194aca 242 SUPERFAMILY SSF57863 92 164 1.05E-10 T 22-04-2016 SCD_RS06970 390feca2eac21d6f4b16932663194aca 242 Hamap MF_00201 DNA repair protein RecO [recO]. 8 239 22.752 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SCD_RS06970 390feca2eac21d6f4b16932663194aca 242 Pfam PF02565 Recombination protein O C terminal 89 226 2.0E-24 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SCD_RS06970 390feca2eac21d6f4b16932663194aca 242 Gene3D G3DSA:2.40.50.140 13 80 1.6E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS08240 00971fa1d131c4a81ae816d9eeff2d5d 300 Pfam PF00483 Nucleotidyl transferase 21 275 1.9E-27 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SCD_RS08240 00971fa1d131c4a81ae816d9eeff2d5d 300 PANTHER PTHR22572 16 293 3.6E-106 T 22-04-2016 SCD_RS08240 00971fa1d131c4a81ae816d9eeff2d5d 300 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 14 275 2.2E-119 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 SCD_RS08240 00971fa1d131c4a81ae816d9eeff2d5d 300 SUPERFAMILY SSF53448 15 287 9.6E-64 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS08240 00971fa1d131c4a81ae816d9eeff2d5d 300 PANTHER PTHR22572:SF14 16 293 3.6E-106 T 22-04-2016 SCD_RS08240 00971fa1d131c4a81ae816d9eeff2d5d 300 Gene3D G3DSA:3.90.550.10 15 285 3.3E-69 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS12620 eaaf47dc40374c08c6e71f7ab5a2dbdf 141 Pfam PF00210 Ferritin-like domain 10 137 9.7E-26 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 SCD_RS12620 eaaf47dc40374c08c6e71f7ab5a2dbdf 141 PANTHER PTHR30295 1 134 6.4E-14 T 22-04-2016 SCD_RS12620 eaaf47dc40374c08c6e71f7ab5a2dbdf 141 Gene3D G3DSA:1.20.1260.10 4 138 1.0E-34 T 22-04-2016 IPR012347 Ferritin-related SCD_RS12620 eaaf47dc40374c08c6e71f7ab5a2dbdf 141 PANTHER PTHR30295:SF7 1 134 6.4E-14 T 22-04-2016 SCD_RS12620 eaaf47dc40374c08c6e71f7ab5a2dbdf 141 PRINTS PR00601 Bacterioferritin signature 107 127 2.7E-9 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SCD_RS12620 eaaf47dc40374c08c6e71f7ab5a2dbdf 141 PRINTS PR00601 Bacterioferritin signature 4 23 2.7E-9 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SCD_RS12620 eaaf47dc40374c08c6e71f7ab5a2dbdf 141 PRINTS PR00601 Bacterioferritin signature 45 65 2.7E-9 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SCD_RS12620 eaaf47dc40374c08c6e71f7ab5a2dbdf 141 PRINTS PR00601 Bacterioferritin signature 86 106 2.7E-9 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SCD_RS12620 eaaf47dc40374c08c6e71f7ab5a2dbdf 141 SUPERFAMILY SSF47240 5 138 1.15E-28 T 22-04-2016 IPR009078 Ferritin-like superfamily SCD_RS05220 0a43439839542a0af0193b0312bc6e27 216 Pfam PF13599 Pentapeptide repeats (9 copies) 18 118 4.5E-15 T 22-04-2016 IPR001646 Pentapeptide repeat SCD_RS05220 0a43439839542a0af0193b0312bc6e27 216 SUPERFAMILY SSF141571 58 214 2.43E-37 T 22-04-2016 SCD_RS05220 0a43439839542a0af0193b0312bc6e27 216 PANTHER PTHR14136 16 191 8.3E-26 T 22-04-2016 SCD_RS05220 0a43439839542a0af0193b0312bc6e27 216 PANTHER PTHR14136:SF0 16 191 8.3E-26 T 22-04-2016 SCD_RS05220 0a43439839542a0af0193b0312bc6e27 216 Pfam PF00805 Pentapeptide repeats (8 copies) 146 183 1.8E-9 T 22-04-2016 IPR001646 Pentapeptide repeat SCD_RS05220 0a43439839542a0af0193b0312bc6e27 216 SUPERFAMILY SSF141571 17 68 1.22E-8 T 22-04-2016 SCD_RS12300 8e7bba6d7873e06885f09717fabe9ae4 361 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SCD_RS12300 8e7bba6d7873e06885f09717fabe9ae4 361 PANTHER PTHR22926 2 361 4.4E-172 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SCD_RS12300 8e7bba6d7873e06885f09717fabe9ae4 361 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 359 25.104 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SCD_RS12300 8e7bba6d7873e06885f09717fabe9ae4 361 Pfam PF00953 Glycosyl transferase family 4 99 285 6.5E-37 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SCD_RS12300 8e7bba6d7873e06885f09717fabe9ae4 361 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 3.1E-5 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SCD_RS12300 8e7bba6d7873e06885f09717fabe9ae4 361 ProSitePatterns PS01348 MraY family signature 2. 190 201 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SCD_RS12300 8e7bba6d7873e06885f09717fabe9ae4 361 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 361 1.2E-134 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SCD_RS12300 8e7bba6d7873e06885f09717fabe9ae4 361 PANTHER PTHR22926:SF5 2 361 4.4E-172 T 22-04-2016 SCD_RS09960 b82ce67eac9dd2f642e2f9aac7c22f89 106 SUPERFAMILY SSF52821 3 105 1.7E-20 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS09960 b82ce67eac9dd2f642e2f9aac7c22f89 106 SMART SM00450 5 102 2.9E-12 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS09960 b82ce67eac9dd2f642e2f9aac7c22f89 106 Pfam PF00581 Rhodanese-like domain 6 99 1.3E-9 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS09960 b82ce67eac9dd2f642e2f9aac7c22f89 106 Gene3D G3DSA:3.40.250.10 4 105 1.6E-18 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS03230 2679a29b07ac72327216b653bf7aa066 328 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 154 6.1E-25 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03230 2679a29b07ac72327216b653bf7aa066 328 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 226 1.1E-24 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SCD_RS03230 2679a29b07ac72327216b653bf7aa066 328 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 315 36.231 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SCD_RS03230 2679a29b07ac72327216b653bf7aa066 328 PANTHER PTHR32108:SF0 1 328 2.3E-146 T 22-04-2016 SCD_RS03230 2679a29b07ac72327216b653bf7aa066 328 SUPERFAMILY SSF56553 53 176 1.96E-43 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03230 2679a29b07ac72327216b653bf7aa066 328 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 249 306 1.4E-24 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SCD_RS03230 2679a29b07ac72327216b653bf7aa066 328 PANTHER PTHR32108 1 328 2.3E-146 T 22-04-2016 SCD_RS03230 2679a29b07ac72327216b653bf7aa066 328 SUPERFAMILY SSF47789 249 321 7.98E-27 T 22-04-2016 SCD_RS03230 2679a29b07ac72327216b653bf7aa066 328 SUPERFAMILY SSF55257 8 53 4.32E-31 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SCD_RS03230 2679a29b07ac72327216b653bf7aa066 328 SUPERFAMILY SSF55257 177 231 4.32E-31 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SCD_RS03230 2679a29b07ac72327216b653bf7aa066 328 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 314 4.6E-112 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SCD_RS03230 2679a29b07ac72327216b653bf7aa066 328 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 324 4.0E-34 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SCD_RS03230 2679a29b07ac72327216b653bf7aa066 328 SMART SM00662 23 232 1.3E-102 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03230 2679a29b07ac72327216b653bf7aa066 328 Gene3D G3DSA:2.170.120.12 66 175 2.4E-44 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SCD_RS03230 2679a29b07ac72327216b653bf7aa066 328 Gene3D G3DSA:3.30.1360.10 12 65 2.9E-9 T 22-04-2016 SCD_RS03230 2679a29b07ac72327216b653bf7aa066 328 Gene3D G3DSA:1.10.150.20 245 321 6.7E-36 T 22-04-2016 SCD_RS14685 9e0939790108df519885cbae670aab7f 307 Pfam PF13469 Sulfotransferase family 38 254 2.7E-22 T 22-04-2016 SCD_RS14685 9e0939790108df519885cbae670aab7f 307 SUPERFAMILY SSF52540 35 305 3.51E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14685 9e0939790108df519885cbae670aab7f 307 Gene3D G3DSA:3.40.50.300 36 255 6.7E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02445 cf5141b26ef1a5c7c744e95bb399631d 148 Pfam PF03625 Domain of unknown function DUF302 54 114 8.0E-16 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SCD_RS02445 cf5141b26ef1a5c7c744e95bb399631d 148 Gene3D G3DSA:3.30.310.70 21 145 2.3E-31 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SCD_RS02445 cf5141b26ef1a5c7c744e95bb399631d 148 SUPERFAMILY SSF103247 24 146 6.02E-32 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SCD_RS08095 85a5c655c3a5e1043ad0fd3648d35d3f 245 PANTHER PTHR12534 3 229 7.4E-110 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SCD_RS08095 85a5c655c3a5e1043ad0fd3648d35d3f 245 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 224 40.232 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SCD_RS08095 85a5c655c3a5e1043ad0fd3648d35d3f 245 SUPERFAMILY SSF52313 5 234 3.92E-91 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain SCD_RS08095 85a5c655c3a5e1043ad0fd3648d35d3f 245 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 225 4.8E-100 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SCD_RS08095 85a5c655c3a5e1043ad0fd3648d35d3f 245 Pfam PF00318 Ribosomal protein S2 8 223 1.1E-90 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS08095 85a5c655c3a5e1043ad0fd3648d35d3f 245 Gene3D G3DSA:3.40.50.10490 22 98 1.7E-61 T 22-04-2016 SCD_RS08095 85a5c655c3a5e1043ad0fd3648d35d3f 245 Gene3D G3DSA:3.40.50.10490 157 234 1.7E-61 T 22-04-2016 SCD_RS08095 85a5c655c3a5e1043ad0fd3648d35d3f 245 PRINTS PR00395 Ribosomal protein S2 signature 86 103 2.9E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS08095 85a5c655c3a5e1043ad0fd3648d35d3f 245 PRINTS PR00395 Ribosomal protein S2 signature 174 185 2.9E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS08095 85a5c655c3a5e1043ad0fd3648d35d3f 245 PRINTS PR00395 Ribosomal protein S2 signature 5 23 2.9E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS08095 85a5c655c3a5e1043ad0fd3648d35d3f 245 PRINTS PR00395 Ribosomal protein S2 signature 36 45 2.9E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS08095 85a5c655c3a5e1043ad0fd3648d35d3f 245 PRINTS PR00395 Ribosomal protein S2 signature 157 174 2.9E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS08095 85a5c655c3a5e1043ad0fd3648d35d3f 245 PRINTS PR00395 Ribosomal protein S2 signature 195 209 2.9E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS08095 85a5c655c3a5e1043ad0fd3648d35d3f 245 Gene3D G3DSA:1.10.287.610 99 151 6.9E-23 T 22-04-2016 SCD_RS08095 85a5c655c3a5e1043ad0fd3648d35d3f 245 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 157 181 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 SCD_RS08095 85a5c655c3a5e1043ad0fd3648d35d3f 245 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 5 16 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 SCD_RS06270 84713021cbd955609d76e03ff5beb3a4 441 PANTHER PTHR11564:SF3 114 399 1.3E-67 T 22-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 SCD_RS06270 84713021cbd955609d76e03ff5beb3a4 441 SMART SM00382 207 373 2.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS06270 84713021cbd955609d76e03ff5beb3a4 441 Gene3D G3DSA:3.40.50.300 220 400 4.6E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06270 84713021cbd955609d76e03ff5beb3a4 441 SUPERFAMILY SSF52540 204 400 5.8E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06270 84713021cbd955609d76e03ff5beb3a4 441 PANTHER PTHR11564 114 399 1.3E-67 T 22-04-2016 SCD_RS06270 84713021cbd955609d76e03ff5beb3a4 441 Gene3D G3DSA:1.20.120.140 169 219 4.1E-5 T 22-04-2016 SCD_RS06270 84713021cbd955609d76e03ff5beb3a4 441 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 296 4.0E-82 T 22-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 SCD_RS06270 84713021cbd955609d76e03ff5beb3a4 441 SMART SM00962 208 400 4.0E-56 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SCD_RS06270 84713021cbd955609d76e03ff5beb3a4 441 Pfam PF00448 SRP54-type protein, GTPase domain 210 399 2.6E-35 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 Gene3D G3DSA:3.30.70.240 604 691 3.7E-35 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 PANTHER PTHR23115 6 184 0.0 T 22-04-2016 SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 PANTHER PTHR23115:SF66 261 289 0.0 T 22-04-2016 SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 Gene3D G3DSA:3.40.50.300 6 293 1.1E-103 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 SUPERFAMILY SSF54211 484 604 1.59E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 3.5E-66 T 22-04-2016 SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 Gene3D G3DSA:2.40.30.10 312 409 4.0E-37 T 22-04-2016 SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 SMART SM00838 605 693 1.7E-55 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 Gene3D G3DSA:3.30.70.870 410 485 8.9E-39 T 22-04-2016 SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 PANTHER PTHR23115 261 289 0.0 T 22-04-2016 SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 SMART SM00889 485 603 1.4E-74 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 110.827 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 Pfam PF00679 Elongation factor G C-terminus 605 691 9.7E-31 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 Gene3D G3DSA:3.30.230.10 489 603 4.4E-53 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.2E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.2E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.2E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.2E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.2E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 SUPERFAMILY SSF54980 608 696 2.88E-29 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 Pfam PF03764 Elongation factor G, domain IV 484 603 2.9E-48 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 PANTHER PTHR23115 308 697 0.0 T 22-04-2016 SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 Pfam PF03144 Elongation factor Tu domain 2 329 396 1.5E-18 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 SUPERFAMILY SSF52540 6 287 9.51E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 1.1E-29 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 PANTHER PTHR23115:SF66 6 184 0.0 T 22-04-2016 SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 PANTHER PTHR23115:SF66 308 697 0.0 T 22-04-2016 SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 SUPERFAMILY SSF50447 310 407 1.68E-36 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 SUPERFAMILY SSF50447 255 281 1.68E-36 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 Pfam PF14492 Elongation Factor G, domain II 409 482 1.0E-34 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SCD_RS03090 1aef5fada4e0020bfe80712e67deb5fd 697 SUPERFAMILY SSF54980 409 486 7.19E-26 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SCD_RS08610 8938537364ab541dc6b3f575f59f55a1 190 SMART SM00271 135 189 9.3E-5 T 22-04-2016 IPR001623 DnaJ domain SCD_RS08610 8938537364ab541dc6b3f575f59f55a1 190 Pfam PF00226 DnaJ domain 141 184 5.2E-7 T 22-04-2016 IPR001623 DnaJ domain SCD_RS08610 8938537364ab541dc6b3f575f59f55a1 190 Pfam PF12339 DNA-J related protein 5 128 3.9E-38 T 22-04-2016 IPR021059 DnaJ-related protein, N-terminal SCD_RS08610 8938537364ab541dc6b3f575f59f55a1 190 Gene3D G3DSA:1.10.287.110 128 185 4.2E-14 T 22-04-2016 IPR001623 DnaJ domain SCD_RS08610 8938537364ab541dc6b3f575f59f55a1 190 SUPERFAMILY SSF46565 130 185 7.07E-13 T 22-04-2016 IPR001623 DnaJ domain SCD_RS04590 4f48c3ada0f93f8d67aca86615a7b095 208 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 204 30.667 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 SCD_RS04590 4f48c3ada0f93f8d67aca86615a7b095 208 PIRSF PIRSF005461 1 208 6.1E-74 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 SCD_RS04590 4f48c3ada0f93f8d67aca86615a7b095 208 PANTHER PTHR10920 1 203 4.4E-105 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 SCD_RS04590 4f48c3ada0f93f8d67aca86615a7b095 208 Gene3D G3DSA:3.40.50.150 2 205 3.4E-69 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS04590 4f48c3ada0f93f8d67aca86615a7b095 208 PANTHER PTHR10920:SF20 1 203 4.4E-105 T 22-04-2016 SCD_RS04590 4f48c3ada0f93f8d67aca86615a7b095 208 SUPERFAMILY SSF53335 27 203 1.27E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS04590 4f48c3ada0f93f8d67aca86615a7b095 208 Pfam PF01728 FtsJ-like methyltransferase 28 203 5.2E-56 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 SCD_RS05140 f096b8f5d41d55a41dfea77d8be9472f 234 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 224 1.4E-53 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS05140 f096b8f5d41d55a41dfea77d8be9472f 234 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 7 225 1.2E-62 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS05140 f096b8f5d41d55a41dfea77d8be9472f 234 PANTHER PTHR32119 1 229 1.2E-113 T 22-04-2016 SCD_RS05140 f096b8f5d41d55a41dfea77d8be9472f 234 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 22-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS05140 f096b8f5d41d55a41dfea77d8be9472f 234 PANTHER PTHR32119:SF2 1 229 1.2E-113 T 22-04-2016 SCD_RS05140 f096b8f5d41d55a41dfea77d8be9472f 234 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 230 41.322 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS05140 f096b8f5d41d55a41dfea77d8be9472f 234 SUPERFAMILY SSF51366 2 226 9.72E-75 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SCD_RS05140 f096b8f5d41d55a41dfea77d8be9472f 234 SMART SM00934 5 225 9.8E-101 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS05140 f096b8f5d41d55a41dfea77d8be9472f 234 Gene3D G3DSA:3.20.20.70 3 228 1.7E-90 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS07365 e9dbe68916d54b9d3410619c18028449 116 PANTHER PTHR30041 1 114 5.3E-35 T 22-04-2016 SCD_RS07365 e9dbe68916d54b9d3410619c18028449 116 PANTHER PTHR30041:SF3 1 114 5.3E-35 T 22-04-2016 SCD_RS07365 e9dbe68916d54b9d3410619c18028449 116 SUPERFAMILY SSF52833 1 113 1.49E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS07365 e9dbe68916d54b9d3410619c18028449 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 1 111 2.9E-30 T 22-04-2016 IPR006504 Transcriptional regulator Spx/MgsR SCD_RS07365 e9dbe68916d54b9d3410619c18028449 116 Gene3D G3DSA:3.40.30.10 1 113 3.8E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS07365 e9dbe68916d54b9d3410619c18028449 116 Pfam PF03960 ArsC family 4 110 1.0E-12 T 22-04-2016 IPR006660 Arsenate reductase-like SCD_RS07900 25a059ec1964ac577e2fb237ce08db9c 223 PANTHER PTHR11735 1 129 6.5E-47 T 22-04-2016 SCD_RS07900 25a059ec1964ac577e2fb237ce08db9c 223 PANTHER PTHR11735:SF11 1 129 6.5E-47 T 22-04-2016 SCD_RS07900 25a059ec1964ac577e2fb237ce08db9c 223 SUPERFAMILY SSF53067 104 211 6.09E-21 T 22-04-2016 SCD_RS07900 25a059ec1964ac577e2fb237ce08db9c 223 SUPERFAMILY SSF53067 2 101 8.63E-30 T 22-04-2016 SCD_RS07900 25a059ec1964ac577e2fb237ce08db9c 223 Pfam PF00814 Glycoprotease family 28 201 5.2E-30 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SCD_RS07900 25a059ec1964ac577e2fb237ce08db9c 223 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 213 4.9E-60 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 SCD_RS07900 25a059ec1964ac577e2fb237ce08db9c 223 Gene3D G3DSA:3.30.420.40 1 127 1.3E-41 T 22-04-2016 SCD_RS02610 1923a1a08d9c53a7af6ddcee7d260fb3 177 SUPERFAMILY SSF69118 1 176 2.66E-38 T 22-04-2016 IPR029032 AhpD-like SCD_RS02610 1923a1a08d9c53a7af6ddcee7d260fb3 177 Gene3D G3DSA:1.20.1290.10 60 172 7.4E-19 T 22-04-2016 IPR029032 AhpD-like SCD_RS02610 1923a1a08d9c53a7af6ddcee7d260fb3 177 Gene3D G3DSA:1.20.5.810 16 44 9.6E-4 T 22-04-2016 SCD_RS13250 5d847aba3eab156a8577170dbe9afb02 301 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 10 32 3.3E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS13250 5d847aba3eab156a8577170dbe9afb02 301 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 32 4.3E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS13250 5d847aba3eab156a8577170dbe9afb02 301 SUPERFAMILY SSF54523 13 65 3.69E-7 T 22-04-2016 SCD_RS13250 5d847aba3eab156a8577170dbe9afb02 301 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS00365 702227960600b238ba9a13c249759b02 347 SUPERFAMILY SSF52540 5 335 7.63E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00365 702227960600b238ba9a13c249759b02 347 Pfam PF00437 Type II/IV secretion system protein 12 265 1.4E-48 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SCD_RS00365 702227960600b238ba9a13c249759b02 347 Gene3D G3DSA:3.40.50.300 100 342 9.2E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00365 702227960600b238ba9a13c249759b02 347 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SCD_RS00365 702227960600b238ba9a13c249759b02 347 SMART SM00382 122 289 0.0022 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS00365 702227960600b238ba9a13c249759b02 347 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 2.2E-153 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 SCD_RS00365 702227960600b238ba9a13c249759b02 347 PANTHER PTHR30486:SF6 1 345 7.5E-192 T 22-04-2016 SCD_RS00365 702227960600b238ba9a13c249759b02 347 PANTHER PTHR30486 1 345 7.5E-192 T 22-04-2016 SCD_RS14805 d82138a9022fa18046549e65d7f8de74 465 Pfam PF02397 Bacterial sugar transferase 276 459 2.4E-56 T 22-04-2016 IPR003362 Bacterial sugar transferase SCD_RS14805 d82138a9022fa18046549e65d7f8de74 465 TIGRFAM TIGR03013 EpsB_2: sugar transferase, PEP-CTERM system associated 19 465 2.5E-180 T 22-04-2016 IPR017464 Sugar transferase, PEP-CTERM system associated SCD_RS14805 d82138a9022fa18046549e65d7f8de74 465 PANTHER PTHR30576 57 465 4.3E-106 T 22-04-2016 SCD_RS14805 d82138a9022fa18046549e65d7f8de74 465 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 20 463 4.2E-119 T 22-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase SCD_RS14805 d82138a9022fa18046549e65d7f8de74 465 PANTHER PTHR30576:SF0 57 465 4.3E-106 T 22-04-2016 SCD_RS05650 03b8b2fa54682e383fa1cb1d72ca0073 164 Gene3D G3DSA:3.40.30.10 3 163 2.1E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS05650 03b8b2fa54682e383fa1cb1d72ca0073 164 PANTHER PTHR10681:SF104 27 146 8.5E-29 T 22-04-2016 SCD_RS05650 03b8b2fa54682e383fa1cb1d72ca0073 164 SUPERFAMILY SSF52833 25 163 1.26E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS05650 03b8b2fa54682e383fa1cb1d72ca0073 164 PANTHER PTHR10681 27 146 8.5E-29 T 22-04-2016 SCD_RS05650 03b8b2fa54682e383fa1cb1d72ca0073 164 ProSitePatterns PS00194 Thioredoxin family active site. 54 72 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SCD_RS05650 03b8b2fa54682e383fa1cb1d72ca0073 164 Pfam PF00578 AhpC/TSA family 30 142 6.7E-23 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SCD_RS00590 13bb4fc489510aabd89c9f5c3554584b 93 PANTHER PTHR33175:SF5 1 92 4.9E-38 T 22-04-2016 SCD_RS00590 13bb4fc489510aabd89c9f5c3554584b 93 PANTHER PTHR33175 1 92 4.9E-38 T 22-04-2016 SCD_RS00590 13bb4fc489510aabd89c9f5c3554584b 93 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 3.8E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS00590 13bb4fc489510aabd89c9f5c3554584b 93 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 3.8E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS00590 13bb4fc489510aabd89c9f5c3554584b 93 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 3.8E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS00590 13bb4fc489510aabd89c9f5c3554584b 93 SUPERFAMILY SSF47729 1 91 3.09E-29 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SCD_RS00590 13bb4fc489510aabd89c9f5c3554584b 93 Pfam PF00216 Bacterial DNA-binding protein 1 90 7.2E-29 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS00590 13bb4fc489510aabd89c9f5c3554584b 93 SMART SM00411 1 91 1.2E-36 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS00590 13bb4fc489510aabd89c9f5c3554584b 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SCD_RS00590 13bb4fc489510aabd89c9f5c3554584b 93 Gene3D G3DSA:4.10.520.10 1 91 8.0E-32 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SCD_RS14435 881f93e2b1504a037559bcf1999f914c 417 Pfam PF00534 Glycosyl transferases group 1 245 391 4.6E-7 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SCD_RS14435 881f93e2b1504a037559bcf1999f914c 417 Gene3D G3DSA:3.40.50.2000 294 392 8.9E-7 T 22-04-2016 SCD_RS14435 881f93e2b1504a037559bcf1999f914c 417 PANTHER PTHR23417 1 111 2.9E-104 T 22-04-2016 SCD_RS14435 881f93e2b1504a037559bcf1999f914c 417 PANTHER PTHR23417 130 140 2.9E-104 T 22-04-2016 SCD_RS14435 881f93e2b1504a037559bcf1999f914c 417 PANTHER PTHR23417 190 416 2.9E-104 T 22-04-2016 SCD_RS14435 881f93e2b1504a037559bcf1999f914c 417 SUPERFAMILY SSF53756 57 410 3.14E-17 T 22-04-2016 SCD_RS14435 881f93e2b1504a037559bcf1999f914c 417 PANTHER PTHR23417:SF2 1 111 2.9E-104 T 22-04-2016 SCD_RS14435 881f93e2b1504a037559bcf1999f914c 417 PANTHER PTHR23417:SF2 130 140 2.9E-104 T 22-04-2016 SCD_RS14435 881f93e2b1504a037559bcf1999f914c 417 PANTHER PTHR23417:SF2 190 416 2.9E-104 T 22-04-2016 SCD_RS14435 881f93e2b1504a037559bcf1999f914c 417 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 209 9.3E-66 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 SCD_RS15620 1b493da2be44373a35a1ccf3e0fab50e 285 PANTHER PTHR10681 129 267 2.9E-17 T 22-04-2016 SCD_RS15620 1b493da2be44373a35a1ccf3e0fab50e 285 SUPERFAMILY SSF52833 130 267 3.44E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS15620 1b493da2be44373a35a1ccf3e0fab50e 285 Gene3D G3DSA:3.40.30.10 127 271 4.0E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS15620 1b493da2be44373a35a1ccf3e0fab50e 285 Gene3D G3DSA:3.40.30.10 6 31 4.0E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS15620 1b493da2be44373a35a1ccf3e0fab50e 285 ProSitePatterns PS00194 Thioredoxin family active site. 158 176 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SCD_RS15620 1b493da2be44373a35a1ccf3e0fab50e 285 PANTHER PTHR10681:SF125 129 267 2.9E-17 T 22-04-2016 SCD_RS15620 1b493da2be44373a35a1ccf3e0fab50e 285 Pfam PF00578 AhpC/TSA family 135 260 3.4E-18 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SCD_RS11250 c188e04d238dca6b2fb6a39623bf2a6c 226 Pfam PF13189 Cytidylate kinase-like family 30 202 1.2E-41 T 22-04-2016 IPR026865 Cytidylate kinase-like family MetaCyc: PWY-7205 SCD_RS11250 c188e04d238dca6b2fb6a39623bf2a6c 226 Gene3D G3DSA:3.40.50.300 27 219 2.1E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11250 c188e04d238dca6b2fb6a39623bf2a6c 226 SUPERFAMILY SSF52540 38 216 1.3E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05955 ae8fc8a1e4e462284a45551dbceb1c7b 576 Pfam PF02254 TrkA-N domain 291 396 1.5E-18 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SCD_RS05955 ae8fc8a1e4e462284a45551dbceb1c7b 576 Pfam PF02254 TrkA-N domain 126 247 4.2E-18 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SCD_RS05955 ae8fc8a1e4e462284a45551dbceb1c7b 576 SUPERFAMILY SSF81324 274 304 7.59E-11 T 22-04-2016 SCD_RS05955 ae8fc8a1e4e462284a45551dbceb1c7b 576 SUPERFAMILY SSF81324 9 101 7.59E-11 T 22-04-2016 SCD_RS05955 ae8fc8a1e4e462284a45551dbceb1c7b 576 SUPERFAMILY SSF51735 286 424 1.34E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS05955 ae8fc8a1e4e462284a45551dbceb1c7b 576 PANTHER PTHR16254 16 286 5.0E-27 T 22-04-2016 SCD_RS05955 ae8fc8a1e4e462284a45551dbceb1c7b 576 Gene3D G3DSA:1.10.287.70 17 103 5.4E-6 T 22-04-2016 SCD_RS05955 ae8fc8a1e4e462284a45551dbceb1c7b 576 PANTHER PTHR16254:SF21 16 286 5.0E-27 T 22-04-2016 SCD_RS05955 ae8fc8a1e4e462284a45551dbceb1c7b 576 Pfam PF07885 Ion channel 18 88 2.7E-5 T 22-04-2016 IPR013099 Potassium channel domain SCD_RS05955 ae8fc8a1e4e462284a45551dbceb1c7b 576 SUPERFAMILY SSF51735 125 268 1.33E-22 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS05955 ae8fc8a1e4e462284a45551dbceb1c7b 576 Gene3D G3DSA:3.40.50.720 126 268 1.1E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS05955 ae8fc8a1e4e462284a45551dbceb1c7b 576 Gene3D G3DSA:3.40.50.720 288 425 3.9E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS14060 0b3c5f7a837e05ea3a15fa9dd591f439 260 Gene3D G3DSA:3.40.190.80 166 258 6.7E-25 T 22-04-2016 SCD_RS14060 0b3c5f7a837e05ea3a15fa9dd591f439 260 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 206 220 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 SCD_RS14060 0b3c5f7a837e05ea3a15fa9dd591f439 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 203 227 1.1E-25 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SCD_RS14060 0b3c5f7a837e05ea3a15fa9dd591f439 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 172 193 1.1E-25 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SCD_RS14060 0b3c5f7a837e05ea3a15fa9dd591f439 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 33 53 1.1E-25 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SCD_RS14060 0b3c5f7a837e05ea3a15fa9dd591f439 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 129 152 1.1E-25 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SCD_RS14060 0b3c5f7a837e05ea3a15fa9dd591f439 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 1.1E-25 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SCD_RS14060 0b3c5f7a837e05ea3a15fa9dd591f439 260 Gene3D G3DSA:3.30.540.10 2 145 2.9E-40 T 22-04-2016 SCD_RS14060 0b3c5f7a837e05ea3a15fa9dd591f439 260 SUPERFAMILY SSF56655 2 258 3.14E-66 T 22-04-2016 SCD_RS14060 0b3c5f7a837e05ea3a15fa9dd591f439 260 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site SCD_RS14060 0b3c5f7a837e05ea3a15fa9dd591f439 260 Pfam PF00459 Inositol monophosphatase family 29 233 3.7E-49 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SCD_RS14060 0b3c5f7a837e05ea3a15fa9dd591f439 260 PANTHER PTHR20854:SF4 1 230 2.2E-55 T 22-04-2016 SCD_RS14060 0b3c5f7a837e05ea3a15fa9dd591f439 260 PANTHER PTHR20854 1 230 2.2E-55 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SCD_RS12955 3ba89d99606fc24400f762b0e5561d28 198 SUPERFAMILY SSF53178 6 190 2.22E-69 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SCD_RS12955 3ba89d99606fc24400f762b0e5561d28 198 PANTHER PTHR17224:SF1 7 196 9.3E-78 T 22-04-2016 SCD_RS12955 3ba89d99606fc24400f762b0e5561d28 198 Pfam PF01195 Peptidyl-tRNA hydrolase 7 186 8.4E-58 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SCD_RS12955 3ba89d99606fc24400f762b0e5561d28 198 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 183 36.892 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SCD_RS12955 3ba89d99606fc24400f762b0e5561d28 198 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 6 187 8.9E-66 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SCD_RS12955 3ba89d99606fc24400f762b0e5561d28 198 Gene3D G3DSA:3.40.50.1470 4 192 3.6E-72 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SCD_RS12955 3ba89d99606fc24400f762b0e5561d28 198 PANTHER PTHR17224 7 196 9.3E-78 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SCD_RS12955 3ba89d99606fc24400f762b0e5561d28 198 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 SCD_RS11095 c218ccded074b07ddc6f76172c3e12f3 235 Pfam PF13801 Heavy-metal resistance 108 222 1.5E-10 T 22-04-2016 IPR025961 Heavy-metal resistance protein SCD_RS13650 309777323ccf4333de3f7934d80478d9 398 PANTHER PTHR11712 97 114 1.8E-77 T 22-04-2016 SCD_RS13650 309777323ccf4333de3f7934d80478d9 398 PANTHER PTHR11712 142 398 1.8E-77 T 22-04-2016 SCD_RS13650 309777323ccf4333de3f7934d80478d9 398 SUPERFAMILY SSF53901 10 235 1.85E-36 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SCD_RS13650 309777323ccf4333de3f7934d80478d9 398 Gene3D G3DSA:3.40.47.10 252 396 3.2E-57 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SCD_RS13650 309777323ccf4333de3f7934d80478d9 398 SMART SM00825 Beta-ketoacyl synthase 44 398 4.1E-11 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SCD_RS13650 309777323ccf4333de3f7934d80478d9 398 Gene3D G3DSA:3.40.47.10 70 236 3.0E-29 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SCD_RS13650 309777323ccf4333de3f7934d80478d9 398 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 92 237 2.6E-23 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SCD_RS13650 309777323ccf4333de3f7934d80478d9 398 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 246 354 3.0E-30 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SCD_RS13650 309777323ccf4333de3f7934d80478d9 398 SUPERFAMILY SSF53901 208 396 2.55E-53 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SCD_RS13650 309777323ccf4333de3f7934d80478d9 398 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site SCD_RS03005 3be1369a271dfcc1061f8c0df07e539d 143 PIRSF PIRSF005276 1 143 1.4E-50 T 22-04-2016 IPR007481 Stringent starvation protein B SCD_RS03005 3be1369a271dfcc1061f8c0df07e539d 143 SUPERFAMILY SSF101738 4 111 1.83E-42 T 22-04-2016 IPR007481 Stringent starvation protein B SCD_RS03005 3be1369a271dfcc1061f8c0df07e539d 143 Gene3D G3DSA:2.30.30.220 4 104 9.2E-44 T 22-04-2016 IPR007481 Stringent starvation protein B SCD_RS03005 3be1369a271dfcc1061f8c0df07e539d 143 Pfam PF04386 Stringent starvation protein B 5 143 2.6E-33 T 22-04-2016 IPR007481 Stringent starvation protein B SCD_RS03005 3be1369a271dfcc1061f8c0df07e539d 143 PANTHER PTHR37486 1 143 4.0E-48 T 22-04-2016 SCD_RS03005 3be1369a271dfcc1061f8c0df07e539d 143 PANTHER PTHR37486:SF1 1 143 4.0E-48 T 22-04-2016 SCD_RS01120 2d2c94165397bfdaa30764fde6feaf1a 356 PANTHER PTHR35801 162 355 1.2E-15 T 22-04-2016 SCD_RS01120 2d2c94165397bfdaa30764fde6feaf1a 356 SUPERFAMILY SSF81606 180 352 1.33E-8 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SCD_RS01120 2d2c94165397bfdaa30764fde6feaf1a 356 PANTHER PTHR35801:SF1 162 355 1.2E-15 T 22-04-2016 SCD_RS02685 5565f793ed7a17f6d8676a3c42655239 298 SUPERFAMILY SSF103481 183 284 2.75E-13 T 22-04-2016 SCD_RS02685 5565f793ed7a17f6d8676a3c42655239 298 PANTHER PTHR12715 5 278 1.4E-33 T 22-04-2016 SCD_RS02685 5565f793ed7a17f6d8676a3c42655239 298 Pfam PF00892 EamA-like transporter family 147 279 1.2E-22 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SCD_RS02685 5565f793ed7a17f6d8676a3c42655239 298 Pfam PF00892 EamA-like transporter family 6 135 1.2E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SCD_RS02685 5565f793ed7a17f6d8676a3c42655239 298 SUPERFAMILY SSF103481 38 138 4.32E-12 T 22-04-2016 SCD_RS13055 90d7bf89b4f5bfb18652a13f90a9811a 216 SMART SM00382 27 214 3.2E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS13055 90d7bf89b4f5bfb18652a13f90a9811a 216 SUPERFAMILY SSF52540 1 215 6.86E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13055 90d7bf89b4f5bfb18652a13f90a9811a 216 Gene3D G3DSA:3.40.50.300 1 215 2.2E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13055 90d7bf89b4f5bfb18652a13f90a9811a 216 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS13055 90d7bf89b4f5bfb18652a13f90a9811a 216 Pfam PF00005 ABC transporter 18 165 1.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS13055 90d7bf89b4f5bfb18652a13f90a9811a 216 PANTHER PTHR24220 3 215 7.4E-101 T 22-04-2016 SCD_RS13055 90d7bf89b4f5bfb18652a13f90a9811a 216 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 1.7E-80 T 22-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 SCD_RS13055 90d7bf89b4f5bfb18652a13f90a9811a 216 PANTHER PTHR24220:SF470 3 215 7.4E-101 T 22-04-2016 SCD_RS08870 6adf23fa103bea2b492be3d5a709b18c 134 PANTHER PTHR21011:SF1 1 134 1.1E-38 T 22-04-2016 SCD_RS08870 6adf23fa103bea2b492be3d5a709b18c 134 SUPERFAMILY SSF54995 1 103 7.85E-39 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SCD_RS08870 6adf23fa103bea2b492be3d5a709b18c 134 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.122 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 SCD_RS08870 6adf23fa103bea2b492be3d5a709b18c 134 Gene3D G3DSA:3.30.70.60 1 103 7.6E-44 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 SCD_RS08870 6adf23fa103bea2b492be3d5a709b18c 134 Pfam PF01250 Ribosomal protein S6 3 91 8.0E-29 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SCD_RS08870 6adf23fa103bea2b492be3d5a709b18c 134 PANTHER PTHR21011 1 134 1.1E-38 T 22-04-2016 SCD_RS08870 6adf23fa103bea2b492be3d5a709b18c 134 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 2.6E-34 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SCD_RS10715 ab22bda75c169a0d96c9a18cfff22e8b 154 SUPERFAMILY SSF47240 3 127 3.7E-29 T 22-04-2016 IPR009078 Ferritin-like superfamily SCD_RS10715 ab22bda75c169a0d96c9a18cfff22e8b 154 PANTHER PTHR33746:SF3 1 132 2.5E-31 T 22-04-2016 SCD_RS10715 ab22bda75c169a0d96c9a18cfff22e8b 154 Pfam PF02915 Rubrerythrin 9 60 1.9E-9 T 22-04-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 SCD_RS10715 ab22bda75c169a0d96c9a18cfff22e8b 154 PANTHER PTHR33746 1 132 2.5E-31 T 22-04-2016 SCD_RS10715 ab22bda75c169a0d96c9a18cfff22e8b 154 Gene3D G3DSA:1.20.1260.10 3 127 8.6E-33 T 22-04-2016 IPR012347 Ferritin-related SCD_RS06160 37ab4024b93df5169631cb3f5bd1b813 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 1.41E-36 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SCD_RS06160 37ab4024b93df5169631cb3f5bd1b813 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 1.41E-36 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SCD_RS06160 37ab4024b93df5169631cb3f5bd1b813 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 1.41E-36 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SCD_RS06160 37ab4024b93df5169631cb3f5bd1b813 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 1.41E-36 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SCD_RS06160 37ab4024b93df5169631cb3f5bd1b813 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SCD_RS06160 37ab4024b93df5169631cb3f5bd1b813 292 PANTHER PTHR12128 1 292 1.2E-142 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SCD_RS06160 37ab4024b93df5169631cb3f5bd1b813 292 SUPERFAMILY SSF51569 2 289 3.14E-106 T 22-04-2016 SCD_RS06160 37ab4024b93df5169631cb3f5bd1b813 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 287 9.6E-113 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SCD_RS06160 37ab4024b93df5169631cb3f5bd1b813 292 SMART SM01130 1 289 1.1E-152 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SCD_RS06160 37ab4024b93df5169631cb3f5bd1b813 292 PANTHER PTHR12128:SF34 1 292 1.2E-142 T 22-04-2016 SCD_RS06160 37ab4024b93df5169631cb3f5bd1b813 292 PIRSF PIRSF001365 1 292 3.0E-94 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SCD_RS06160 37ab4024b93df5169631cb3f5bd1b813 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 287 69.285 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SCD_RS06160 37ab4024b93df5169631cb3f5bd1b813 292 Gene3D G3DSA:3.20.20.70 1 291 3.5E-122 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS06160 37ab4024b93df5169631cb3f5bd1b813 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 1.5E-105 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SCD_RS06160 37ab4024b93df5169631cb3f5bd1b813 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SCD_RS06930 df8994304d465407279e19b7696310a2 224 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 218 2.2E-68 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 SCD_RS06930 df8994304d465407279e19b7696310a2 224 Gene3D G3DSA:1.10.1520.10 4 142 1.2E-46 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SCD_RS06930 df8994304d465407279e19b7696310a2 224 PANTHER PTHR11207 4 221 2.5E-80 T 22-04-2016 SCD_RS06930 df8994304d465407279e19b7696310a2 224 Hamap MF_00104 Ribonuclease 3 [rnc]. 6 217 28.376 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 SCD_RS06930 df8994304d465407279e19b7696310a2 224 Gene3D G3DSA:3.30.160.20 150 221 1.0E-21 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SCD_RS06930 df8994304d465407279e19b7696310a2 224 SUPERFAMILY SSF69065 4 155 7.15E-49 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SCD_RS06930 df8994304d465407279e19b7696310a2 224 Pfam PF00035 Double-stranded RNA binding motif 153 218 3.4E-8 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SCD_RS06930 df8994304d465407279e19b7696310a2 224 SMART SM00358 153 221 4.4E-17 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SCD_RS06930 df8994304d465407279e19b7696310a2 224 ProSitePatterns PS00517 Ribonuclease III family signature. 35 43 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SCD_RS06930 df8994304d465407279e19b7696310a2 224 SUPERFAMILY SSF54768 106 220 3.46E-24 T 22-04-2016 SCD_RS06930 df8994304d465407279e19b7696310a2 224 SMART SM00535 18 146 9.3E-51 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SCD_RS06930 df8994304d465407279e19b7696310a2 224 Pfam PF14622 Ribonuclease-III-like 16 137 3.6E-36 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 Pfam PF01612 3'-5' exonuclease 309 494 2.3E-34 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 SMART SM00279 170 205 1.7E-8 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 SUPERFAMILY SSF56672 503 906 6.45E-155 T 22-04-2016 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 168 261 7.9E-24 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 SUPERFAMILY SSF47807 168 282 1.17E-31 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 PRINTS PR00868 DNA-polymerase family A (pol I) signature 678 701 4.2E-77 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 PRINTS PR00868 DNA-polymerase family A (pol I) signature 708 721 4.2E-77 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 PRINTS PR00868 DNA-polymerase family A (pol I) signature 656 671 4.2E-77 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 PRINTS PR00868 DNA-polymerase family A (pol I) signature 769 780 4.2E-77 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 PRINTS PR00868 DNA-polymerase family A (pol I) signature 791 802 4.2E-77 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 PRINTS PR00868 DNA-polymerase family A (pol I) signature 633 655 4.2E-77 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 PRINTS PR00868 DNA-polymerase family A (pol I) signature 853 866 4.2E-77 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 PRINTS PR00868 DNA-polymerase family A (pol I) signature 823 839 4.2E-77 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 PRINTS PR00868 DNA-polymerase family A (pol I) signature 732 757 4.2E-77 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 Gene3D G3DSA:1.10.150.20 183 243 4.2E-23 T 22-04-2016 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 167 3.2E-52 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 SUPERFAMILY SSF88723 4 167 2.44E-56 T 22-04-2016 IPR029060 PIN domain-like SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 Gene3D G3DSA:3.30.70.370 642 689 1.5E-64 T 22-04-2016 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 Gene3D G3DSA:3.30.70.370 796 906 1.5E-64 T 22-04-2016 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 TIGRFAM TIGR00593 pola: DNA polymerase I 6 906 4.8E-276 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 PANTHER PTHR10133:SF27 295 905 0.0 T 22-04-2016 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 PANTHER PTHR10133:SF27 1 278 0.0 T 22-04-2016 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 SMART SM00474 309 495 6.4E-36 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 Pfam PF00476 DNA polymerase family A 529 903 7.7E-153 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 Gene3D G3DSA:1.10.150.20 690 795 7.2E-37 T 22-04-2016 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 SMART SM00482 664 870 4.0E-113 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 Gene3D G3DSA:1.20.1060.10 521 641 3.8E-37 T 22-04-2016 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 PANTHER PTHR10133 295 905 0.0 T 22-04-2016 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 PANTHER PTHR10133 1 278 0.0 T 22-04-2016 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 ProSitePatterns PS00447 DNA polymerase family A signature. 732 751 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 SUPERFAMILY SSF53098 307 494 2.52E-51 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 Gene3D G3DSA:3.30.420.10 308 520 1.5E-76 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 SMART SM00475 3 258 6.4E-112 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 SCD_RS00225 f569e912b9975e573f25eb30f2f2e29c 906 Gene3D G3DSA:3.40.50.1010 4 182 1.9E-66 T 22-04-2016 IPR029060 PIN domain-like SCD_RS14600 c4b92d68d8249f16c26ab98ecbe6ce82 510 Pfam PF02706 Chain length determinant protein 12 148 1.4E-12 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 SCD_RS14600 c4b92d68d8249f16c26ab98ecbe6ce82 510 TIGRFAM TIGR03007 pepcterm_ChnLen: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily 7 502 5.9E-200 T 22-04-2016 IPR014345 PEP-CTERM locus polysaccharide chain length determinant SCD_RS03380 7cb9a725ae37156d0b7a2db501eaca08 210 Pfam PF13394 4Fe-4S single cluster domain 22 104 1.0E-12 T 22-04-2016 SCD_RS03380 7cb9a725ae37156d0b7a2db501eaca08 210 Gene3D G3DSA:3.20.20.70 23 100 8.6E-14 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS03380 7cb9a725ae37156d0b7a2db501eaca08 210 PANTHER PTHR11228 1 210 5.0E-55 T 22-04-2016 SCD_RS03380 7cb9a725ae37156d0b7a2db501eaca08 210 PANTHER PTHR11228:SF6 1 210 5.0E-55 T 22-04-2016 SCD_RS03380 7cb9a725ae37156d0b7a2db501eaca08 210 PIRSF PIRSF000370 1 210 1.6E-67 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 SCD_RS03380 7cb9a725ae37156d0b7a2db501eaca08 210 Pfam PF04055 Radical SAM superfamily 25 112 3.5E-14 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SCD_RS03380 7cb9a725ae37156d0b7a2db501eaca08 210 SUPERFAMILY SSF102114 16 100 1.57E-14 T 22-04-2016 SCD_RS03380 7cb9a725ae37156d0b7a2db501eaca08 210 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 1 207 36.25 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 SCD_RS03380 7cb9a725ae37156d0b7a2db501eaca08 210 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 1 210 1.9E-110 T 22-04-2016 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE SCD_RS06025 f47ed79ca8952bd9b62cdd0fc11e4d84 281 PANTHER PTHR24322 147 179 5.9E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS06025 f47ed79ca8952bd9b62cdd0fc11e4d84 281 PANTHER PTHR24322 8 131 5.9E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS06025 f47ed79ca8952bd9b62cdd0fc11e4d84 281 Gene3D G3DSA:3.40.50.720 4 273 4.0E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS06025 f47ed79ca8952bd9b62cdd0fc11e4d84 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 5.4E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS06025 f47ed79ca8952bd9b62cdd0fc11e4d84 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 5.4E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS06025 f47ed79ca8952bd9b62cdd0fc11e4d84 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 5.4E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS06025 f47ed79ca8952bd9b62cdd0fc11e4d84 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.1E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS06025 f47ed79ca8952bd9b62cdd0fc11e4d84 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 2.1E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS06025 f47ed79ca8952bd9b62cdd0fc11e4d84 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 2.1E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS06025 f47ed79ca8952bd9b62cdd0fc11e4d84 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 2.1E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS06025 f47ed79ca8952bd9b62cdd0fc11e4d84 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 2.1E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS06025 f47ed79ca8952bd9b62cdd0fc11e4d84 281 PANTHER PTHR24322:SF463 147 179 5.9E-56 T 22-04-2016 SCD_RS06025 f47ed79ca8952bd9b62cdd0fc11e4d84 281 PANTHER PTHR24322:SF463 8 131 5.9E-56 T 22-04-2016 SCD_RS06025 f47ed79ca8952bd9b62cdd0fc11e4d84 281 SUPERFAMILY SSF51735 4 222 7.41E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS06025 f47ed79ca8952bd9b62cdd0fc11e4d84 281 Pfam PF00106 short chain dehydrogenase 4 189 6.4E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS06185 edae99e5935ac11c762aa4fcb98cd18f 154 PANTHER PTHR10681 1 152 8.6E-53 T 22-04-2016 SCD_RS06185 edae99e5935ac11c762aa4fcb98cd18f 154 PIRSF PIRSF000239 1 154 2.8E-27 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 SCD_RS06185 edae99e5935ac11c762aa4fcb98cd18f 154 Gene3D G3DSA:3.40.30.10 1 153 4.1E-52 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS06185 edae99e5935ac11c762aa4fcb98cd18f 154 Pfam PF00578 AhpC/TSA family 4 132 7.1E-37 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SCD_RS06185 edae99e5935ac11c762aa4fcb98cd18f 154 SUPERFAMILY SSF52833 1 153 2.48E-52 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS03310 a9c1dcb5bb6b2438b618b65782bc1b20 365 Hamap MF_00569 Quinolinate synthase A [nadA]. 15 364 49.123 T 22-04-2016 IPR023515 Quinolinate synthase A, type 3 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 SCD_RS03310 a9c1dcb5bb6b2438b618b65782bc1b20 365 PANTHER PTHR30573 10 363 3.9E-144 T 22-04-2016 SCD_RS03310 a9c1dcb5bb6b2438b618b65782bc1b20 365 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 19 364 8.6E-94 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 SCD_RS03310 a9c1dcb5bb6b2438b618b65782bc1b20 365 PANTHER PTHR30573:SF0 10 363 3.9E-144 T 22-04-2016 SCD_RS03310 a9c1dcb5bb6b2438b618b65782bc1b20 365 SUPERFAMILY SSF142754 27 363 2.48E-97 T 22-04-2016 SCD_RS03310 a9c1dcb5bb6b2438b618b65782bc1b20 365 Pfam PF02445 Quinolinate synthetase A protein 22 363 2.0E-106 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 SCD_RS09375 444d0415ae3a8c1935db0b629cceb751 210 PANTHER PTHR30625 1 206 1.2E-38 T 22-04-2016 SCD_RS09375 444d0415ae3a8c1935db0b629cceb751 210 Pfam PF01618 MotA/TolQ/ExbB proton channel family 65 196 1.2E-34 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SCD_RS08795 5f6e44afa7371c95b28dd962689bf7da 270 SUPERFAMILY SSF48576 3 269 4.32E-67 T 22-04-2016 IPR008949 Isoprenoid synthase domain SCD_RS08795 5f6e44afa7371c95b28dd962689bf7da 270 PANTHER PTHR31480 6 267 1.3E-61 T 22-04-2016 SCD_RS08795 5f6e44afa7371c95b28dd962689bf7da 270 PANTHER PTHR31480:SF8 6 267 1.3E-61 T 22-04-2016 SCD_RS08795 5f6e44afa7371c95b28dd962689bf7da 270 Pfam PF00494 Squalene/phytoene synthase 3 253 9.8E-57 T 22-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 SCD_RS08795 5f6e44afa7371c95b28dd962689bf7da 270 TIGRFAM TIGR03464 HpnC: squalene synthase HpnC 3 267 7.8E-99 T 22-04-2016 IPR017827 Squalene synthase HpnC SCD_RS08795 5f6e44afa7371c95b28dd962689bf7da 270 Gene3D G3DSA:1.10.600.10 4 267 1.1E-58 T 22-04-2016 IPR008949 Isoprenoid synthase domain SCD_RS08665 16914a6bd4c5c481999b337021766116 123 PANTHER PTHR30561 46 123 3.0E-17 T 22-04-2016 SCD_RS08665 16914a6bd4c5c481999b337021766116 123 Pfam PF00893 Small Multidrug Resistance protein 53 113 3.1E-7 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 SCD_RS08665 16914a6bd4c5c481999b337021766116 123 PANTHER PTHR30561:SF9 46 123 3.0E-17 T 22-04-2016 SCD_RS08665 16914a6bd4c5c481999b337021766116 123 SUPERFAMILY SSF103481 52 122 3.66E-12 T 22-04-2016 SCD_RS15040 b994a8946e9e89a294d00a6ccc03642d 192 SUPERFAMILY SSF56719 1 113 7.32E-44 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SCD_RS15040 b994a8946e9e89a294d00a6ccc03642d 192 PRINTS PR00418 DNA topoisomerase II family signature 78 90 4.8E-23 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS15040 b994a8946e9e89a294d00a6ccc03642d 192 PRINTS PR00418 DNA topoisomerase II family signature 40 56 4.8E-23 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS15040 b994a8946e9e89a294d00a6ccc03642d 192 PRINTS PR00418 DNA topoisomerase II family signature 58 75 4.8E-23 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS15040 b994a8946e9e89a294d00a6ccc03642d 192 Pfam PF01751 Toprim domain 36 84 9.8E-9 T 22-04-2016 IPR006171 Toprim domain SCD_RS15040 b994a8946e9e89a294d00a6ccc03642d 192 PANTHER PTHR10169 1 106 2.6E-50 T 22-04-2016 SCD_RS15040 b994a8946e9e89a294d00a6ccc03642d 192 Gene3D G3DSA:3.40.50.670 1 111 2.7E-49 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS07265 4f2a51501c4696ecb87490eddb003f31 131 Gene3D G3DSA:3.40.50.2300 6 128 2.7E-42 T 22-04-2016 SCD_RS07265 4f2a51501c4696ecb87490eddb003f31 131 PANTHER PTHR26402 7 119 1.0E-42 T 22-04-2016 SCD_RS07265 4f2a51501c4696ecb87490eddb003f31 131 SUPERFAMILY SSF52172 5 124 4.55E-41 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS07265 4f2a51501c4696ecb87490eddb003f31 131 Pfam PF00072 Response regulator receiver domain 9 119 3.9E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS07265 4f2a51501c4696ecb87490eddb003f31 131 SMART SM00448 7 119 5.3E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS00435 13329aca4d2ee8af10283daab7fe9de3 222 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 9 213 1.9E-55 T 22-04-2016 SCD_RS00435 13329aca4d2ee8af10283daab7fe9de3 222 PANTHER PTHR42208:SF1 1 218 5.0E-48 T 22-04-2016 SCD_RS00435 13329aca4d2ee8af10283daab7fe9de3 222 PANTHER PTHR42208 1 218 5.0E-48 T 22-04-2016 SCD_RS08810 c1ca10448bede8740bfd7913a4460bff 248 Gene3D G3DSA:3.40.50.720 8 246 1.2E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS08810 c1ca10448bede8740bfd7913a4460bff 248 PANTHER PTHR24322 166 199 2.6E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS08810 c1ca10448bede8740bfd7913a4460bff 248 PANTHER PTHR24322 18 150 2.6E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS08810 c1ca10448bede8740bfd7913a4460bff 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 3.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS08810 c1ca10448bede8740bfd7913a4460bff 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 3.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS08810 c1ca10448bede8740bfd7913a4460bff 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 3.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS08810 c1ca10448bede8740bfd7913a4460bff 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 3.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS08810 c1ca10448bede8740bfd7913a4460bff 248 Pfam PF00106 short chain dehydrogenase 15 205 2.8E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS08810 c1ca10448bede8740bfd7913a4460bff 248 PANTHER PTHR24322:SF337 166 199 2.6E-44 T 22-04-2016 SCD_RS08810 c1ca10448bede8740bfd7913a4460bff 248 PANTHER PTHR24322:SF337 18 150 2.6E-44 T 22-04-2016 SCD_RS08810 c1ca10448bede8740bfd7913a4460bff 248 SUPERFAMILY SSF51735 12 248 5.97E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS00625 e511e6cf365b4c36ea1216ca40201fa2 79 Pfam PF14452 Multiubiquitin 7 63 2.7E-13 T 22-04-2016 IPR027802 Multi-ubiquitin domain SCD_RS08140 e82f29a2fd60257b78c8f7a715169b1e 129 Gene3D G3DSA:1.20.5.170 51 84 2.0E-4 T 22-04-2016 SCD_RS08140 e82f29a2fd60257b78c8f7a715169b1e 129 Pfam PF10975 Protein of unknown function (DUF2802) 59 123 1.6E-21 T 22-04-2016 IPR021244 Protein of unknown function DUF2802 SCD_RS02130 3014dd90d4426322c9513188e4027475 498 PANTHER PTHR30121 18 441 5.9E-176 T 22-04-2016 SCD_RS02130 3014dd90d4426322c9513188e4027475 498 Gene3D G3DSA:3.40.50.300 204 381 8.1E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02130 3014dd90d4426322c9513188e4027475 498 Gene3D G3DSA:3.40.50.300 6 108 8.1E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02130 3014dd90d4426322c9513188e4027475 498 PANTHER PTHR30121:SF3 18 441 5.9E-176 T 22-04-2016 SCD_RS02130 3014dd90d4426322c9513188e4027475 498 SUPERFAMILY SSF52540 6 376 4.73E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02130 3014dd90d4426322c9513188e4027475 498 Pfam PF05872 Bacterial protein of unknown function (DUF853) 6 498 4.7E-238 T 22-04-2016 IPR033186 Helicase HerA-like C-terminal SCD_RS04340 85159cb72385b9b84d57f3a6a4761bf9 468 Gene3D G3DSA:3.30.499.10 294 304 1.0E-61 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04340 85159cb72385b9b84d57f3a6a4761bf9 468 Gene3D G3DSA:3.30.499.10 336 467 1.0E-61 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04340 85159cb72385b9b84d57f3a6a4761bf9 468 SUPERFAMILY SSF53732 3 467 7.72E-164 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04340 85159cb72385b9b84d57f3a6a4761bf9 468 Gene3D G3DSA:3.40.1060.10 169 282 5.3E-39 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04340 85159cb72385b9b84d57f3a6a4761bf9 468 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 468 60.127 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04340 85159cb72385b9b84d57f3a6a4761bf9 468 PRINTS PR00415 Aconitase family signature 120 133 2.0E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04340 85159cb72385b9b84d57f3a6a4761bf9 468 PRINTS PR00415 Aconitase family signature 344 355 2.0E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04340 85159cb72385b9b84d57f3a6a4761bf9 468 PRINTS PR00415 Aconitase family signature 196 209 2.0E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04340 85159cb72385b9b84d57f3a6a4761bf9 468 PRINTS PR00415 Aconitase family signature 210 223 2.0E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04340 85159cb72385b9b84d57f3a6a4761bf9 468 PRINTS PR00415 Aconitase family signature 83 96 2.0E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04340 85159cb72385b9b84d57f3a6a4761bf9 468 PRINTS PR00415 Aconitase family signature 134 149 2.0E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04340 85159cb72385b9b84d57f3a6a4761bf9 468 PRINTS PR00415 Aconitase family signature 109 117 2.0E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04340 85159cb72385b9b84d57f3a6a4761bf9 468 PRINTS PR00415 Aconitase family signature 287 301 2.0E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04340 85159cb72385b9b84d57f3a6a4761bf9 468 PRINTS PR00415 Aconitase family signature 401 414 2.0E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04340 85159cb72385b9b84d57f3a6a4761bf9 468 ProSitePatterns PS00450 Aconitase family signature 1. 340 356 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04340 85159cb72385b9b84d57f3a6a4761bf9 468 Gene3D G3DSA:3.30.499.10 4 157 1.1E-20 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04340 85159cb72385b9b84d57f3a6a4761bf9 468 PANTHER PTHR11670:SF38 328 467 1.9E-284 T 22-04-2016 SCD_RS04340 85159cb72385b9b84d57f3a6a4761bf9 468 PANTHER PTHR11670:SF38 1 308 1.9E-284 T 22-04-2016 SCD_RS04340 85159cb72385b9b84d57f3a6a4761bf9 468 Pfam PF00330 Aconitase family (aconitate hydratase) 8 459 8.2E-155 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04340 85159cb72385b9b84d57f3a6a4761bf9 468 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 466 5.1E-236 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04340 85159cb72385b9b84d57f3a6a4761bf9 468 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04340 85159cb72385b9b84d57f3a6a4761bf9 468 PANTHER PTHR11670 328 467 1.9E-284 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04340 85159cb72385b9b84d57f3a6a4761bf9 468 PANTHER PTHR11670 1 308 1.9E-284 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS12685 8748c80c79416b4884e3b4682d78b306 247 PANTHER PTHR30399 14 247 2.0E-45 T 22-04-2016 SCD_RS12685 8748c80c79416b4884e3b4682d78b306 247 Pfam PF01863 Protein of unknown function DUF45 34 238 8.8E-58 T 22-04-2016 IPR002725 Protein of unknown function DUF45 SCD_RS07685 4568b10a4b2fc40d1d90056a04f92262 441 Pfam PF13502 AsmA-like C-terminal region 211 384 4.6E-10 T 22-04-2016 IPR032712 AsmA-like, C-terminal SCD_RS07685 4568b10a4b2fc40d1d90056a04f92262 441 Pfam PF05170 AsmA family 7 110 4.5E-10 T 22-04-2016 IPR007844 AsmA SCD_RS05745 9e0847b50d85aaf4b639bdbe58243d62 267 PANTHER PTHR24322:SF317 11 144 6.0E-57 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SCD_RS05745 9e0847b50d85aaf4b639bdbe58243d62 267 PANTHER PTHR24322:SF317 160 192 6.0E-57 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SCD_RS05745 9e0847b50d85aaf4b639bdbe58243d62 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 253 5.2E-81 T 22-04-2016 SCD_RS05745 9e0847b50d85aaf4b639bdbe58243d62 267 PANTHER PTHR24322 11 144 6.0E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS05745 9e0847b50d85aaf4b639bdbe58243d62 267 PANTHER PTHR24322 160 192 6.0E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS05745 9e0847b50d85aaf4b639bdbe58243d62 267 PIRSF PIRSF000094 1 261 5.4E-113 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SCD_RS05745 9e0847b50d85aaf4b639bdbe58243d62 267 SUPERFAMILY SSF51735 6 254 2.54E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS05745 9e0847b50d85aaf4b639bdbe58243d62 267 Gene3D G3DSA:3.40.50.720 2 254 3.7E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS05745 9e0847b50d85aaf4b639bdbe58243d62 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.7E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS05745 9e0847b50d85aaf4b639bdbe58243d62 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.7E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS05745 9e0847b50d85aaf4b639bdbe58243d62 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.7E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS05745 9e0847b50d85aaf4b639bdbe58243d62 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.7E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS14875 62feca58c75525b14abeb5a0ab82f2f0 285 PANTHER PTHR10953 1 128 8.1E-28 T 22-04-2016 SCD_RS14875 62feca58c75525b14abeb5a0ab82f2f0 285 SUPERFAMILY SSF69572 7 267 2.49E-48 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SCD_RS14875 62feca58c75525b14abeb5a0ab82f2f0 285 PANTHER PTHR10953:SF145 1 128 8.1E-28 T 22-04-2016 SCD_RS14875 62feca58c75525b14abeb5a0ab82f2f0 285 Gene3D G3DSA:3.40.50.720 5 256 1.3E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS14875 62feca58c75525b14abeb5a0ab82f2f0 285 Pfam PF00899 ThiF family 11 255 7.1E-38 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SCD_RS06250 f949043168f102491263c438eb32717c 112 PRINTS PR00355 Adrenodoxin signature 83 91 4.3E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 SCD_RS06250 f949043168f102491263c438eb32717c 112 PRINTS PR00355 Adrenodoxin signature 60 74 4.3E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 SCD_RS06250 f949043168f102491263c438eb32717c 112 PRINTS PR00355 Adrenodoxin signature 42 52 4.3E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 SCD_RS06250 f949043168f102491263c438eb32717c 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 16 92 8.7E-14 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SCD_RS06250 f949043168f102491263c438eb32717c 112 SUPERFAMILY SSF54292 8 105 5.96E-31 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SCD_RS06250 f949043168f102491263c438eb32717c 112 PANTHER PTHR23426 7 112 7.1E-35 T 22-04-2016 SCD_RS06250 f949043168f102491263c438eb32717c 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 6.9E-55 T 22-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 SCD_RS06250 f949043168f102491263c438eb32717c 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 22-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 SCD_RS06250 f949043168f102491263c438eb32717c 112 Gene3D G3DSA:3.10.20.30 6 107 7.7E-32 T 22-04-2016 IPR012675 Beta-grasp domain SCD_RS12310 eefb2bc133d9c6dc25768a8634e4d25b 505 SUPERFAMILY SSF53623 106 339 4.71E-77 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS12310 eefb2bc133d9c6dc25768a8634e4d25b 505 SUPERFAMILY SSF63418 19 104 6.93E-21 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS12310 eefb2bc133d9c6dc25768a8634e4d25b 505 PANTHER PTHR23135:SF4 14 496 4.9E-189 T 22-04-2016 SCD_RS12310 eefb2bc133d9c6dc25768a8634e4d25b 505 Pfam PF08245 Mur ligase middle domain 115 321 5.4E-51 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS12310 eefb2bc133d9c6dc25768a8634e4d25b 505 Gene3D G3DSA:3.40.1190.10 106 345 1.6E-82 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS12310 eefb2bc133d9c6dc25768a8634e4d25b 505 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 18 494 34.367 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 SCD_RS12310 eefb2bc133d9c6dc25768a8634e4d25b 505 Gene3D G3DSA:3.90.190.20 346 487 1.2E-57 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SCD_RS12310 eefb2bc133d9c6dc25768a8634e4d25b 505 PANTHER PTHR23135 14 496 4.9E-189 T 22-04-2016 SCD_RS12310 eefb2bc133d9c6dc25768a8634e4d25b 505 Pfam PF02875 Mur ligase family, glutamate ligase domain 342 428 3.2E-24 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SCD_RS12310 eefb2bc133d9c6dc25768a8634e4d25b 505 SUPERFAMILY SSF53244 342 496 3.79E-51 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SCD_RS12310 eefb2bc133d9c6dc25768a8634e4d25b 505 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 25 494 5.2E-159 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 SCD_RS12310 eefb2bc133d9c6dc25768a8634e4d25b 505 Gene3D G3DSA:3.40.1390.10 19 104 2.4E-24 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS12310 eefb2bc133d9c6dc25768a8634e4d25b 505 Pfam PF01225 Mur ligase family, catalytic domain 27 103 2.1E-11 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS02625 b80d0107cae9478b426ecc65426a8314 201 SUPERFAMILY SSF55469 1 201 6.81E-55 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SCD_RS02625 b80d0107cae9478b426ecc65426a8314 201 PANTHER PTHR23026:SF111 1 201 2.9E-57 T 22-04-2016 SCD_RS02625 b80d0107cae9478b426ecc65426a8314 201 PANTHER PTHR23026 1 201 2.9E-57 T 22-04-2016 SCD_RS02625 b80d0107cae9478b426ecc65426a8314 201 Gene3D G3DSA:3.40.109.10 1 196 3.6E-58 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SCD_RS02625 b80d0107cae9478b426ecc65426a8314 201 Pfam PF00881 Nitroreductase family 7 177 9.7E-36 T 22-04-2016 IPR029479 Nitroreductase SCD_RS01100 31a20f55caf09eb7b8029ef656f7f861 410 PANTHER PTHR30483:SF8 5 406 1.1E-145 T 22-04-2016 SCD_RS01100 31a20f55caf09eb7b8029ef656f7f861 410 Pfam PF13433 Periplasmic binding protein domain 35 393 5.7E-152 T 22-04-2016 SCD_RS01100 31a20f55caf09eb7b8029ef656f7f861 410 PANTHER PTHR30483 5 406 1.1E-145 T 22-04-2016 SCD_RS01100 31a20f55caf09eb7b8029ef656f7f861 410 Gene3D G3DSA:3.40.50.2300 30 123 3.5E-6 T 22-04-2016 SCD_RS01100 31a20f55caf09eb7b8029ef656f7f861 410 Gene3D G3DSA:3.40.50.2300 150 331 1.7E-63 T 22-04-2016 SCD_RS01100 31a20f55caf09eb7b8029ef656f7f861 410 SUPERFAMILY SSF53822 35 389 4.04E-90 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SCD_RS13280 f9dbdf8da1078e7793231f56d69a248d 409 Pfam PF00482 Type II secretion system (T2SS), protein F 73 196 1.1E-27 T 22-04-2016 IPR018076 Type II secretion system F domain SCD_RS13280 f9dbdf8da1078e7793231f56d69a248d 409 Pfam PF00482 Type II secretion system (T2SS), protein F 276 398 9.4E-26 T 22-04-2016 IPR018076 Type II secretion system F domain SCD_RS13280 f9dbdf8da1078e7793231f56d69a248d 409 PANTHER PTHR30012 2 407 3.7E-153 T 22-04-2016 SCD_RS13280 f9dbdf8da1078e7793231f56d69a248d 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 7.2E-14 T 22-04-2016 IPR003004 GspF/PilC family SCD_RS13280 f9dbdf8da1078e7793231f56d69a248d 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 7.2E-14 T 22-04-2016 IPR003004 GspF/PilC family SCD_RS13280 f9dbdf8da1078e7793231f56d69a248d 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 7.2E-14 T 22-04-2016 IPR003004 GspF/PilC family SCD_RS13280 f9dbdf8da1078e7793231f56d69a248d 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 7.2E-14 T 22-04-2016 IPR003004 GspF/PilC family SCD_RS13280 f9dbdf8da1078e7793231f56d69a248d 409 PANTHER PTHR30012:SF4 2 407 3.7E-153 T 22-04-2016 SCD_RS09640 ad37477f1cda52800b5c593ba779aa55 487 PANTHER PTHR30624 25 487 1.5E-230 T 22-04-2016 SCD_RS09640 ad37477f1cda52800b5c593ba779aa55 487 SUPERFAMILY SSF111283 32 486 6.67E-137 T 22-04-2016 SCD_RS09640 ad37477f1cda52800b5c593ba779aa55 487 PANTHER PTHR30624:SF4 25 487 1.5E-230 T 22-04-2016 SCD_RS09640 ad37477f1cda52800b5c593ba779aa55 487 Pfam PF01523 Putative modulator of DNA gyrase 46 338 3.5E-69 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SCD_RS09640 ad37477f1cda52800b5c593ba779aa55 487 PIRSF PIRSF004919 28 487 9.6E-140 T 22-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SCD_RS10375 311a30e8fdda1b0bc0b1ea05fb2cef0a 185 SUPERFAMILY SSF55846 5 180 7.72E-62 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SCD_RS10375 311a30e8fdda1b0bc0b1ea05fb2cef0a 185 PANTHER PTHR30417 3 180 7.7E-67 T 22-04-2016 SCD_RS10375 311a30e8fdda1b0bc0b1ea05fb2cef0a 185 SMART SM00644 20 167 1.0E-39 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SCD_RS10375 311a30e8fdda1b0bc0b1ea05fb2cef0a 185 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 57 168 2.5E-19 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SCD_RS10375 311a30e8fdda1b0bc0b1ea05fb2cef0a 185 PANTHER PTHR30417:SF4 3 180 7.7E-67 T 22-04-2016 SCD_RS10375 311a30e8fdda1b0bc0b1ea05fb2cef0a 185 Gene3D G3DSA:3.40.80.10 7 180 4.8E-63 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SCD_RS12110 6a9bfcb736ec7f01e3c366c4e915601d 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 2.8E-24 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SCD_RS12110 6a9bfcb736ec7f01e3c366c4e915601d 70 PANTHER PTHR21109 1 60 2.4E-23 T 22-04-2016 SCD_RS12110 6a9bfcb736ec7f01e3c366c4e915601d 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 57 1.0E-14 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SCD_RS12110 6a9bfcb736ec7f01e3c366c4e915601d 70 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 22-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS12110 6a9bfcb736ec7f01e3c366c4e915601d 70 Pfam PF01165 Ribosomal protein S21 3 57 8.7E-22 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SCD_RS12110 6a9bfcb736ec7f01e3c366c4e915601d 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 8.9E-16 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SCD_RS12110 6a9bfcb736ec7f01e3c366c4e915601d 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 8.9E-16 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SCD_RS12110 6a9bfcb736ec7f01e3c366c4e915601d 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 8.9E-16 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SCD_RS12110 6a9bfcb736ec7f01e3c366c4e915601d 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 8.9E-16 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SCD_RS12110 6a9bfcb736ec7f01e3c366c4e915601d 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.039 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SCD_RS07560 7f5daa7ec05facd65b1c9b575e2cd438 206 SUPERFAMILY SSF52540 6 205 2.02E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07560 7f5daa7ec05facd65b1c9b575e2cd438 206 Hamap MF_00165 Thymidylate kinase [tmk]. 9 206 29.243 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SCD_RS07560 7f5daa7ec05facd65b1c9b575e2cd438 206 Gene3D G3DSA:3.40.50.300 8 205 1.6E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07560 7f5daa7ec05facd65b1c9b575e2cd438 206 Pfam PF02223 Thymidylate kinase 13 196 3.7E-49 T 22-04-2016 SCD_RS07560 7f5daa7ec05facd65b1c9b575e2cd438 206 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 7 196 6.3E-54 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SCD_RS07560 7f5daa7ec05facd65b1c9b575e2cd438 206 PANTHER PTHR10344 6 203 4.6E-61 T 22-04-2016 SCD_RS06375 35b16b1b3db491715a87e234cc659756 651 SMART SM00460 398 469 5.6E-26 T 22-04-2016 IPR002931 Transglutaminase-like SCD_RS06375 35b16b1b3db491715a87e234cc659756 651 Pfam PF13559 Domain of unknown function (DUF4129) 579 639 2.3E-6 T 22-04-2016 IPR025403 Domain of unknown function DUF4129 SCD_RS06375 35b16b1b3db491715a87e234cc659756 651 Gene3D G3DSA:3.90.260.10 333 591 4.3E-52 T 22-04-2016 IPR002931 Transglutaminase-like SCD_RS06375 35b16b1b3db491715a87e234cc659756 651 Pfam PF11992 Domain of unknown function (DUF3488) 16 323 2.1E-112 T 22-04-2016 IPR021878 Protein of unknown function DUF3488 SCD_RS06375 35b16b1b3db491715a87e234cc659756 651 PANTHER PTHR33490 1 508 3.4E-88 T 22-04-2016 SCD_RS06375 35b16b1b3db491715a87e234cc659756 651 SUPERFAMILY SSF54001 272 598 3.22E-66 T 22-04-2016 SCD_RS06375 35b16b1b3db491715a87e234cc659756 651 Pfam PF01841 Transglutaminase-like superfamily 353 467 1.7E-25 T 22-04-2016 IPR002931 Transglutaminase-like SCD_RS06375 35b16b1b3db491715a87e234cc659756 651 PANTHER PTHR33490:SF4 1 508 3.4E-88 T 22-04-2016 SCD_RS06035 bfd6662d0199db280ea633d1dba97fa0 405 PANTHER PTHR33525 4 358 4.7E-89 T 22-04-2016 SCD_RS06035 bfd6662d0199db280ea633d1dba97fa0 405 Pfam PF00563 EAL domain 2 194 5.8E-18 T 22-04-2016 IPR001633 EAL domain SCD_RS06035 bfd6662d0199db280ea633d1dba97fa0 405 SUPERFAMILY SSF141868 2 198 4.45E-33 T 22-04-2016 IPR001633 EAL domain SCD_RS06035 bfd6662d0199db280ea633d1dba97fa0 405 PANTHER PTHR33525:SF4 4 358 4.7E-89 T 22-04-2016 SCD_RS06035 bfd6662d0199db280ea633d1dba97fa0 405 PIRSF PIRSF003180 2 405 5.0E-124 T 22-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing SCD_RS06035 bfd6662d0199db280ea633d1dba97fa0 405 SUPERFAMILY SSF109604 185 402 2.13E-36 T 22-04-2016 SCD_RS06035 bfd6662d0199db280ea633d1dba97fa0 405 Gene3D G3DSA:1.10.3150.10 187 354 6.9E-33 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS06035 bfd6662d0199db280ea633d1dba97fa0 405 SMART SM00052 2 199 2.7E-6 T 22-04-2016 IPR001633 EAL domain SCD_RS06035 bfd6662d0199db280ea633d1dba97fa0 405 Pfam PF08668 HDOD domain 208 307 6.2E-10 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS06035 bfd6662d0199db280ea633d1dba97fa0 405 Gene3D G3DSA:3.20.20.450 83 186 6.0E-13 T 22-04-2016 IPR001633 EAL domain SCD_RS00680 29f4861e7d820b0c15eecfb3084666a5 629 Gene3D G3DSA:1.10.10.60 143 206 8.6E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS00680 29f4861e7d820b0c15eecfb3084666a5 629 Gene3D G3DSA:3.30.420.10 227 425 1.3E-22 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS00680 29f4861e7d820b0c15eecfb3084666a5 629 SUPERFAMILY SSF53098 223 423 3.95E-21 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS00680 29f4861e7d820b0c15eecfb3084666a5 629 Pfam PF00665 Integrase core domain 228 364 5.1E-16 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SCD_RS00680 29f4861e7d820b0c15eecfb3084666a5 629 Pfam PF09299 Mu transposase, C-terminal 451 516 1.8E-9 T 22-04-2016 IPR015378 Transposase-like, Mu, C-terminal SCD_RS03385 1d7b1afd7978208946cdd9af36581ed1 854 SUPERFAMILY SSF53623 431 720 2.09E-44 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS03385 1d7b1afd7978208946cdd9af36581ed1 854 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 471 494 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 SCD_RS03385 1d7b1afd7978208946cdd9af36581ed1 854 Pfam PF02875 Mur ligase family, glutamate ligase domain 708 783 3.2E-13 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SCD_RS03385 1d7b1afd7978208946cdd9af36581ed1 854 Pfam PF08245 Mur ligase middle domain 473 683 3.4E-20 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS03385 1d7b1afd7978208946cdd9af36581ed1 854 SUPERFAMILY SSF56059 368 460 9.19E-35 T 22-04-2016 SCD_RS03385 1d7b1afd7978208946cdd9af36581ed1 854 SUPERFAMILY SSF56059 202 332 9.19E-35 T 22-04-2016 SCD_RS03385 1d7b1afd7978208946cdd9af36581ed1 854 SUPERFAMILY SSF53244 708 836 1.68E-25 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SCD_RS03385 1d7b1afd7978208946cdd9af36581ed1 854 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 202 286 6.7E-7 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SCD_RS03385 1d7b1afd7978208946cdd9af36581ed1 854 Pfam PF08443 RimK-like ATP-grasp domain 373 439 1.7E-4 T 22-04-2016 IPR013651 ATP-grasp fold, RimK-type SCD_RS03385 1d7b1afd7978208946cdd9af36581ed1 854 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 2 851 0.0 T 22-04-2016 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 SCD_RS03385 1d7b1afd7978208946cdd9af36581ed1 854 Gene3D G3DSA:3.40.1190.10 467 701 3.2E-37 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS03385 1d7b1afd7978208946cdd9af36581ed1 854 PANTHER PTHR23135 374 839 3.1E-119 T 22-04-2016 SCD_RS03385 1d7b1afd7978208946cdd9af36581ed1 854 PANTHER PTHR23135:SF18 374 839 3.1E-119 T 22-04-2016 SCD_RS03385 1d7b1afd7978208946cdd9af36581ed1 854 Gene3D G3DSA:3.90.190.20 711 836 5.4E-25 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SCD_RS03385 1d7b1afd7978208946cdd9af36581ed1 854 Gene3D G3DSA:3.30.470.20 199 318 7.5E-28 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SCD_RS03385 1d7b1afd7978208946cdd9af36581ed1 854 Gene3D G3DSA:3.30.470.20 381 441 7.5E-28 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SCD_RS00210 4419edc2c7d8393cf20f94512c3b3734 209 PANTHER PTHR33508:SF1 1 204 2.0E-57 T 22-04-2016 SCD_RS00210 4419edc2c7d8393cf20f94512c3b3734 209 PANTHER PTHR33508 1 204 2.0E-57 T 22-04-2016 SCD_RS00210 4419edc2c7d8393cf20f94512c3b3734 209 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 9 202 7.7E-48 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 SCD_RS00210 4419edc2c7d8393cf20f94512c3b3734 209 Pfam PF01914 MarC family integral membrane protein 8 204 3.5E-51 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 SCD_RS14810 8672f87ebad3a20f7a6b04f18ae2d17b 240 Pfam PF13365 Trypsin-like peptidase domain 39 202 5.0E-23 T 22-04-2016 SCD_RS14810 8672f87ebad3a20f7a6b04f18ae2d17b 240 PANTHER PTHR22939 3 235 3.5E-16 T 22-04-2016 SCD_RS14810 8672f87ebad3a20f7a6b04f18ae2d17b 240 Gene3D G3DSA:2.40.10.10 105 235 2.2E-11 T 22-04-2016 SCD_RS14810 8672f87ebad3a20f7a6b04f18ae2d17b 240 SUPERFAMILY SSF50494 10 236 4.72E-34 T 22-04-2016 IPR009003 Peptidase S1, PA clan SCD_RS14810 8672f87ebad3a20f7a6b04f18ae2d17b 240 Gene3D G3DSA:2.40.10.10 10 104 5.7E-18 T 22-04-2016 SCD_RS05440 1849de0f42253edf77bd42c41dad546c 217 Pfam PF00005 ABC transporter 17 163 5.1E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS05440 1849de0f42253edf77bd42c41dad546c 217 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 2 213 2.1E-96 T 22-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 SCD_RS05440 1849de0f42253edf77bd42c41dad546c 217 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS05440 1849de0f42253edf77bd42c41dad546c 217 SMART SM00382 24 212 3.7E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS05440 1849de0f42253edf77bd42c41dad546c 217 PANTHER PTHR24220:SF111 11 217 1.4E-107 T 22-04-2016 SCD_RS05440 1849de0f42253edf77bd42c41dad546c 217 SUPERFAMILY SSF52540 2 213 2.08E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05440 1849de0f42253edf77bd42c41dad546c 217 Gene3D G3DSA:3.40.50.300 3 213 1.6E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05440 1849de0f42253edf77bd42c41dad546c 217 PANTHER PTHR24220 11 217 1.4E-107 T 22-04-2016 SCD_RS03240 2ccf29bde995007d4978365bc0c11b8f 938 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 937 22.431 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 SCD_RS03240 2ccf29bde995007d4978365bc0c11b8f 938 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 922 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 SCD_RS03240 2ccf29bde995007d4978365bc0c11b8f 938 Gene3D G3DSA:3.40.50.300 599 666 6.2E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03240 2ccf29bde995007d4978365bc0c11b8f 938 Gene3D G3DSA:3.40.50.300 818 935 6.2E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03240 2ccf29bde995007d4978365bc0c11b8f 938 Gene3D G3DSA:3.40.50.300 476 593 9.7E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03240 2ccf29bde995007d4978365bc0c11b8f 938 Gene3D G3DSA:3.40.50.300 4 89 9.7E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03240 2ccf29bde995007d4978365bc0c11b8f 938 Gene3D G3DSA:1.10.8.280 284 404 1.6E-39 T 22-04-2016 SCD_RS03240 2ccf29bde995007d4978365bc0c11b8f 938 SUPERFAMILY SSF52540 619 910 5.09E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03240 2ccf29bde995007d4978365bc0c11b8f 938 Gene3D G3DSA:1.20.1580.10 249 282 1.9E-52 T 22-04-2016 SCD_RS03240 2ccf29bde995007d4978365bc0c11b8f 938 Gene3D G3DSA:1.20.1580.10 405 475 1.9E-52 T 22-04-2016 SCD_RS03240 2ccf29bde995007d4978365bc0c11b8f 938 Gene3D G3DSA:1.20.1580.10 91 129 1.9E-52 T 22-04-2016 SCD_RS03240 2ccf29bde995007d4978365bc0c11b8f 938 SUPERFAMILY SSF52540 1 204 1.0E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03240 2ccf29bde995007d4978365bc0c11b8f 938 SUPERFAMILY SSF52540 428 567 1.0E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03240 2ccf29bde995007d4978365bc0c11b8f 938 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS03240 2ccf29bde995007d4978365bc0c11b8f 938 ProSitePatterns PS00211 ABC transporters family signature. 827 841 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS03240 2ccf29bde995007d4978365bc0c11b8f 938 Gene3D G3DSA:3.30.1490.20 200 248 6.7E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SCD_RS03240 2ccf29bde995007d4978365bc0c11b8f 938 Gene3D G3DSA:3.30.1490.20 130 153 6.7E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SCD_RS03240 2ccf29bde995007d4978365bc0c11b8f 938 Gene3D G3DSA:1.20.1580.10 691 817 1.8E-53 T 22-04-2016 SCD_RS03240 2ccf29bde995007d4978365bc0c11b8f 938 PANTHER PTHR32282 1 937 0.0 T 22-04-2016 SCD_RS03240 2ccf29bde995007d4978365bc0c11b8f 938 PANTHER PTHR32282:SF2 1 937 0.0 T 22-04-2016 SCD_RS07550 e23ab2d74b0d0968b438d337c66d61e7 120 Pfam PF07238 PilZ domain 19 107 4.2E-10 T 22-04-2016 IPR009875 PilZ domain GO:0035438 SCD_RS13460 c75e529f1e2ec068758db9eee5275535 109 Pfam PF04358 DsrC like protein 4 104 5.9E-30 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE SCD_RS13460 c75e529f1e2ec068758db9eee5275535 109 Gene3D G3DSA:3.30.1420.10 4 39 1.5E-7 T 22-04-2016 SCD_RS13460 c75e529f1e2ec068758db9eee5275535 109 PIRSF PIRSF006223 3 107 8.7E-32 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE SCD_RS13460 c75e529f1e2ec068758db9eee5275535 109 PANTHER PTHR37010 1 105 9.8E-24 T 22-04-2016 SCD_RS13460 c75e529f1e2ec068758db9eee5275535 109 SUPERFAMILY SSF69721 2 105 1.07E-30 T 22-04-2016 IPR025526 DsrC-like domain SCD_RS13460 c75e529f1e2ec068758db9eee5275535 109 PANTHER PTHR37010:SF1 1 105 9.8E-24 T 22-04-2016 SCD_RS13460 c75e529f1e2ec068758db9eee5275535 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 104 6.7E-27 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE SCD_RS13460 c75e529f1e2ec068758db9eee5275535 109 Gene3D G3DSA:1.10.10.370 40 105 5.6E-22 T 22-04-2016 SCD_RS01460 38a44a6991a74ac628518f146a6bc120 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 123 4.7E-12 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SCD_RS01460 38a44a6991a74ac628518f146a6bc120 138 PANTHER PTHR36503 2 138 4.5E-59 T 22-04-2016 SCD_RS01460 38a44a6991a74ac628518f146a6bc120 138 Gene3D G3DSA:3.10.180.10 1 131 4.8E-42 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SCD_RS01460 38a44a6991a74ac628518f146a6bc120 138 SUPERFAMILY SSF54593 4 129 3.44E-28 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SCD_RS01460 38a44a6991a74ac628518f146a6bc120 138 PANTHER PTHR36503:SF1 2 138 4.5E-59 T 22-04-2016 SCD_RS09250 1ccb8e3b3617cda06f248b07eae06d32 364 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 97 341 8.0E-103 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein SCD_RS09250 1ccb8e3b3617cda06f248b07eae06d32 364 SUPERFAMILY SSF117916 1 84 4.9E-18 T 22-04-2016 SCD_RS09250 1ccb8e3b3617cda06f248b07eae06d32 364 Gene3D G3DSA:3.40.50.300 93 341 6.6E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS09250 1ccb8e3b3617cda06f248b07eae06d32 364 PANTHER PTHR23264 1 362 4.3E-164 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein SCD_RS09250 1ccb8e3b3617cda06f248b07eae06d32 364 Pfam PF01883 Domain of unknown function DUF59 5 78 3.2E-21 T 22-04-2016 IPR002744 Domain of unknown function DUF59 SCD_RS09250 1ccb8e3b3617cda06f248b07eae06d32 364 ProSitePatterns PS01215 Mrp family signature. 205 221 - T 22-04-2016 IPR000808 Mrp, conserved site GO:0005524 SCD_RS09250 1ccb8e3b3617cda06f248b07eae06d32 364 PANTHER PTHR23264:SF19 1 362 4.3E-164 T 22-04-2016 SCD_RS09250 1ccb8e3b3617cda06f248b07eae06d32 364 Hamap MF_02040 Iron-sulfur cluster carrier protein. 92 342 37.654 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein SCD_RS09250 1ccb8e3b3617cda06f248b07eae06d32 364 SUPERFAMILY SSF52540 91 326 7.52E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02930 2958722a60395eb66b11ebc8171f0ddf 248 Pfam PF00977 Histidine biosynthesis protein 3 232 6.0E-78 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 SCD_RS02930 2958722a60395eb66b11ebc8171f0ddf 248 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 236 2.8E-76 T 22-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 SCD_RS02930 2958722a60395eb66b11ebc8171f0ddf 248 PANTHER PTHR21235:SF15 1 245 6.1E-99 T 22-04-2016 SCD_RS02930 2958722a60395eb66b11ebc8171f0ddf 248 PANTHER PTHR21235 1 245 6.1E-99 T 22-04-2016 SCD_RS02930 2958722a60395eb66b11ebc8171f0ddf 248 Gene3D G3DSA:3.20.20.70 1 240 1.8E-88 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS02930 2958722a60395eb66b11ebc8171f0ddf 248 SUPERFAMILY SSF51366 1 239 7.85E-75 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SCD_RS02930 2958722a60395eb66b11ebc8171f0ddf 248 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 240 35.938 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 SCD_RS02195 d8b1dc0d5ff9923a64f20dcce8db71c3 68 Pfam PF04102 SlyX 3 68 4.1E-23 T 22-04-2016 IPR007236 SlyX SCD_RS02195 d8b1dc0d5ff9923a64f20dcce8db71c3 68 PANTHER PTHR36508 3 68 1.0E-14 T 22-04-2016 SCD_RS02195 d8b1dc0d5ff9923a64f20dcce8db71c3 68 Gene3D G3DSA:1.20.5.300 3 48 5.5E-14 T 22-04-2016 SCD_RS09950 df6ff671dde9ef426e0299c8cf84e2c7 399 Gene3D G3DSA:1.20.1250.20 7 191 7.2E-15 T 22-04-2016 SCD_RS09950 df6ff671dde9ef426e0299c8cf84e2c7 399 Gene3D G3DSA:1.20.1250.20 210 395 3.1E-16 T 22-04-2016 SCD_RS09950 df6ff671dde9ef426e0299c8cf84e2c7 399 PANTHER PTHR23520 3 398 1.6E-63 T 22-04-2016 SCD_RS09950 df6ff671dde9ef426e0299c8cf84e2c7 399 SUPERFAMILY SSF103473 7 394 4.84E-41 T 22-04-2016 IPR020846 Major facilitator superfamily domain SCD_RS09950 df6ff671dde9ef426e0299c8cf84e2c7 399 Pfam PF07690 Major Facilitator Superfamily 9 354 2.6E-22 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SCD_RS09950 df6ff671dde9ef426e0299c8cf84e2c7 399 PANTHER PTHR23520:SF5 3 398 1.6E-63 T 22-04-2016 SCD_RS00180 e5b8523eb13904de472b0c4d413ab570 299 Gene3D G3DSA:3.40.1500.10 3 298 8.6E-131 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SCD_RS00180 e5b8523eb13904de472b0c4d413ab570 299 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 1 273 53.902 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SCD_RS00180 e5b8523eb13904de472b0c4d413ab570 299 PRINTS PR00073 Coprogen oxidase signature 158 187 4.4E-84 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SCD_RS00180 e5b8523eb13904de472b0c4d413ab570 299 PRINTS PR00073 Coprogen oxidase signature 27 43 4.4E-84 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SCD_RS00180 e5b8523eb13904de472b0c4d413ab570 299 PRINTS PR00073 Coprogen oxidase signature 258 284 4.4E-84 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SCD_RS00180 e5b8523eb13904de472b0c4d413ab570 299 PRINTS PR00073 Coprogen oxidase signature 230 257 4.4E-84 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SCD_RS00180 e5b8523eb13904de472b0c4d413ab570 299 PRINTS PR00073 Coprogen oxidase signature 44 65 4.4E-84 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SCD_RS00180 e5b8523eb13904de472b0c4d413ab570 299 PRINTS PR00073 Coprogen oxidase signature 121 143 4.4E-84 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SCD_RS00180 e5b8523eb13904de472b0c4d413ab570 299 PRINTS PR00073 Coprogen oxidase signature 86 110 4.4E-84 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SCD_RS00180 e5b8523eb13904de472b0c4d413ab570 299 PANTHER PTHR10755 3 299 4.4E-169 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SCD_RS00180 e5b8523eb13904de472b0c4d413ab570 299 SUPERFAMILY SSF102886 4 298 4.71E-134 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SCD_RS00180 e5b8523eb13904de472b0c4d413ab570 299 PIRSF PIRSF000166 1 299 3.3E-125 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SCD_RS00180 e5b8523eb13904de472b0c4d413ab570 299 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 162 186 - T 22-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SCD_RS00180 e5b8523eb13904de472b0c4d413ab570 299 Pfam PF01218 Coproporphyrinogen III oxidase 6 298 1.1E-128 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SCD_RS02460 f2b0f4e867459a1da3b152a0719e69e3 434 PANTHER PTHR11986 1 432 1.2E-177 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SCD_RS02460 f2b0f4e867459a1da3b152a0719e69e3 434 Pfam PF00202 Aminotransferase class-III 27 425 1.1E-111 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SCD_RS02460 f2b0f4e867459a1da3b152a0719e69e3 434 Gene3D G3DSA:3.40.640.10 65 338 9.8E-89 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS02460 f2b0f4e867459a1da3b152a0719e69e3 434 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 431 2.2E-161 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 SCD_RS02460 f2b0f4e867459a1da3b152a0719e69e3 434 Gene3D G3DSA:3.90.1150.10 340 432 8.9E-48 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS02460 f2b0f4e867459a1da3b152a0719e69e3 434 Gene3D G3DSA:3.90.1150.10 4 64 8.9E-48 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS02460 f2b0f4e867459a1da3b152a0719e69e3 434 PANTHER PTHR11986:SF8 1 432 1.2E-177 T 22-04-2016 SCD_RS02460 f2b0f4e867459a1da3b152a0719e69e3 434 SUPERFAMILY SSF53383 11 429 2.07E-119 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS02460 f2b0f4e867459a1da3b152a0719e69e3 434 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 249 286 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SCD_RS02460 f2b0f4e867459a1da3b152a0719e69e3 434 PIRSF PIRSF000521 18 434 5.4E-29 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 Gene3D G3DSA:3.30.1590.10 849 932 1.9E-41 T 22-04-2016 SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 Gene3D G3DSA:3.30.1590.10 1025 1063 1.9E-41 T 22-04-2016 SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 SUPERFAMILY SSF51445 755 929 9.43E-133 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 SUPERFAMILY SSF51445 1017 1607 9.43E-133 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 SUPERFAMILY SSF51445 656 726 5.93E-144 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 Pfam PF00128 Alpha amylase, catalytic domain 778 847 4.1E-12 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 Gene3D G3DSA:1.10.150.200 1182 1247 6.5E-16 T 22-04-2016 SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 Gene3D G3DSA:1.10.150.200 1290 1315 6.5E-16 T 22-04-2016 SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 Gene3D G3DSA:3.20.20.80 1349 1388 1.4E-71 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 Gene3D G3DSA:3.20.20.80 1079 1161 1.4E-71 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 Gene3D G3DSA:3.20.20.80 756 848 1.4E-71 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 Gene3D G3DSA:3.20.20.80 1588 1638 1.4E-71 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 Gene3D G3DSA:3.20.20.80 1504 1551 1.4E-71 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 Gene3D G3DSA:3.20.20.80 184 620 6.9E-155 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 Gene3D G3DSA:3.20.20.80 660 722 6.9E-155 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 Gene3D G3DSA:1.10.10.470 1389 1497 2.6E-30 T 22-04-2016 IPR013797 Maltooligosyl trehalose synthase, N-terminal MetaCyc: PWY-2661 SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 Pfam PF02446 4-alpha-glucanotransferase 191 714 3.1E-118 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 756 1707 2.3E-303 T 22-04-2016 IPR012767 Malto-oligosyltrehalose synthase MetaCyc: PWY-2661 SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 PANTHER PTHR32438 627 758 8.3E-165 T 22-04-2016 SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 PANTHER PTHR32438 146 608 8.3E-165 T 22-04-2016 SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 SUPERFAMILY SSF51445 185 617 5.93E-144 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 PANTHER PTHR32438:SF5 627 758 8.3E-165 T 22-04-2016 SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 PANTHER PTHR32438:SF5 146 608 8.3E-165 T 22-04-2016 SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 SMART SM00642 753 1271 2.8E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SCD_RS12030 4941597fdd990464cfdc7cfa53ddc8c4 1712 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 143 719 4.6E-147 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SCD_RS09370 d7376109c9ad5da070347dfd92c1c040 140 PANTHER PTHR30558:SF5 1 134 3.0E-32 T 22-04-2016 SCD_RS09370 d7376109c9ad5da070347dfd92c1c040 140 PANTHER PTHR30558 1 134 3.0E-32 T 22-04-2016 SCD_RS09370 d7376109c9ad5da070347dfd92c1c040 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 136 1.4E-29 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SCD_RS04895 e418f43ddaf10ce6af27076f7e737e13 272 SUPERFAMILY SSF52540 8 237 1.16E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04895 e418f43ddaf10ce6af27076f7e737e13 272 Gene3D G3DSA:3.40.50.300 3 238 9.1E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04895 e418f43ddaf10ce6af27076f7e737e13 272 PANTHER PTHR24220 10 269 4.1E-122 T 22-04-2016 SCD_RS04895 e418f43ddaf10ce6af27076f7e737e13 272 Pfam PF00005 ABC transporter 24 173 3.9E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS04895 e418f43ddaf10ce6af27076f7e737e13 272 PANTHER PTHR24220:SF368 10 269 4.1E-122 T 22-04-2016 SCD_RS04895 e418f43ddaf10ce6af27076f7e737e13 272 SMART SM00382 33 239 3.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS00530 1d79ce9d0c3f96005a230e0995819902 315 SUPERFAMILY SSF102114 40 305 2.88E-64 T 22-04-2016 SCD_RS00530 1d79ce9d0c3f96005a230e0995819902 315 TIGRFAM TIGR00510 lipA: lipoyl synthase 22 304 7.3E-135 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SCD_RS00530 1d79ce9d0c3f96005a230e0995819902 315 Hamap MF_00206 Lipoyl synthase [lipA]. 1 313 152.216 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SCD_RS00530 1d79ce9d0c3f96005a230e0995819902 315 PANTHER PTHR10949 22 306 5.2E-166 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SCD_RS00530 1d79ce9d0c3f96005a230e0995819902 315 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 22 62 1.2E-10 T 22-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SCD_RS00530 1d79ce9d0c3f96005a230e0995819902 315 Pfam PF04055 Radical SAM superfamily 81 240 4.1E-13 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SCD_RS00530 1d79ce9d0c3f96005a230e0995819902 315 SMART SM00729 73 282 4.6E-12 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SCD_RS00530 1d79ce9d0c3f96005a230e0995819902 315 Gene3D G3DSA:3.20.20.70 40 305 2.2E-69 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS00530 1d79ce9d0c3f96005a230e0995819902 315 PIRSF PIRSF005963 2 315 1.6E-130 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SCD_RS04430 678087d8b502d2a5168b41fa51a82a92 218 Pfam PF11185 Protein of unknown function (DUF2971) 74 142 2.2E-6 T 22-04-2016 IPR021352 Protein of unknown function DUF2971 SCD_RS03650 e749b9ad3d8bce1d73431b83603e8547 418 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 5.7E-17 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 SCD_RS03650 e749b9ad3d8bce1d73431b83603e8547 418 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.3E-23 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SCD_RS03650 e749b9ad3d8bce1d73431b83603e8547 418 SUPERFAMILY SSF52540 90 371 9.32E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03650 e749b9ad3d8bce1d73431b83603e8547 418 Gene3D G3DSA:2.40.50.140 49 117 6.8E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS03650 e749b9ad3d8bce1d73431b83603e8547 418 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 2.5E-211 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 SCD_RS03650 e749b9ad3d8bce1d73431b83603e8547 418 SMART SM00382 170 356 1.3E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS03650 e749b9ad3d8bce1d73431b83603e8547 418 Gene3D G3DSA:1.10.720.10 1 47 2.6E-19 T 22-04-2016 SCD_RS03650 e749b9ad3d8bce1d73431b83603e8547 418 PANTHER PTHR15184 78 418 1.0E-189 T 22-04-2016 SCD_RS03650 e749b9ad3d8bce1d73431b83603e8547 418 SUPERFAMILY SSF68912 1 46 6.28E-11 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 SCD_RS03650 e749b9ad3d8bce1d73431b83603e8547 418 SMART SM00959 5 47 8.8E-19 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 SCD_RS03650 e749b9ad3d8bce1d73431b83603e8547 418 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 6.8E-32 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 SCD_RS03650 e749b9ad3d8bce1d73431b83603e8547 418 SMART SM00357 52 118 2.4E-19 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 SCD_RS03650 e749b9ad3d8bce1d73431b83603e8547 418 SUPERFAMILY SSF50249 49 125 3.17E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS03650 e749b9ad3d8bce1d73431b83603e8547 418 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 418 248.825 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 SCD_RS03650 e749b9ad3d8bce1d73431b83603e8547 418 Gene3D G3DSA:3.40.50.300 132 417 4.3E-108 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03650 e749b9ad3d8bce1d73431b83603e8547 418 PANTHER PTHR15184:SF34 78 418 1.0E-189 T 22-04-2016 SCD_RS04855 4f17936eb2b5aea4bd9c4c5871da1997 538 SUPERFAMILY SSF141868 282 529 5.62E-93 T 22-04-2016 IPR001633 EAL domain SCD_RS04855 4f17936eb2b5aea4bd9c4c5871da1997 538 PANTHER PTHR10799:SF774 19 377 3.1E-101 T 22-04-2016 SCD_RS04855 4f17936eb2b5aea4bd9c4c5871da1997 538 Gene3D G3DSA:3.20.20.450 281 529 3.3E-103 T 22-04-2016 IPR001633 EAL domain SCD_RS04855 4f17936eb2b5aea4bd9c4c5871da1997 538 SMART SM00052 277 523 2.3E-126 T 22-04-2016 IPR001633 EAL domain SCD_RS04855 4f17936eb2b5aea4bd9c4c5871da1997 538 SUPERFAMILY SSF55073 111 268 5.3E-54 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS04855 4f17936eb2b5aea4bd9c4c5871da1997 538 Gene3D G3DSA:3.30.70.270 108 273 3.7E-58 T 22-04-2016 SCD_RS04855 4f17936eb2b5aea4bd9c4c5871da1997 538 Pfam PF00563 EAL domain 283 518 1.4E-72 T 22-04-2016 IPR001633 EAL domain SCD_RS04855 4f17936eb2b5aea4bd9c4c5871da1997 538 PANTHER PTHR10799 19 377 3.1E-101 T 22-04-2016 SCD_RS04855 4f17936eb2b5aea4bd9c4c5871da1997 538 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 105 265 1.9E-41 T 22-04-2016 IPR000160 GGDEF domain SCD_RS04855 4f17936eb2b5aea4bd9c4c5871da1997 538 SMART SM00267 95 267 5.0E-69 T 22-04-2016 IPR000160 GGDEF domain SCD_RS04855 4f17936eb2b5aea4bd9c4c5871da1997 538 Pfam PF00990 Diguanylate cyclase, GGDEF domain 107 263 1.0E-52 T 22-04-2016 IPR000160 GGDEF domain SCD_RS13210 633a45a5af060f5dfe83a368d5043d0b 612 Pfam PF00263 Bacterial type II and III secretion system protein 404 581 3.2E-40 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 SCD_RS13210 633a45a5af060f5dfe83a368d5043d0b 612 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 265 580 4.6E-81 T 22-04-2016 IPR013358 Pilus biogenesis, MshL SCD_RS13210 633a45a5af060f5dfe83a368d5043d0b 612 PRINTS PR00811 Bacterial general secretion pathway protein D signature 442 452 1.2E-20 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS13210 633a45a5af060f5dfe83a368d5043d0b 612 PRINTS PR00811 Bacterial general secretion pathway protein D signature 300 310 1.2E-20 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS13210 633a45a5af060f5dfe83a368d5043d0b 612 PRINTS PR00811 Bacterial general secretion pathway protein D signature 545 563 1.2E-20 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS13210 633a45a5af060f5dfe83a368d5043d0b 612 PRINTS PR00811 Bacterial general secretion pathway protein D signature 399 423 1.2E-20 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS13210 633a45a5af060f5dfe83a368d5043d0b 612 PRINTS PR00811 Bacterial general secretion pathway protein D signature 568 582 1.2E-20 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS13210 633a45a5af060f5dfe83a368d5043d0b 612 SMART SM00965 95 143 1.4E-7 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SCD_RS13210 633a45a5af060f5dfe83a368d5043d0b 612 PANTHER PTHR30332 261 608 2.6E-67 T 22-04-2016 SCD_RS13210 633a45a5af060f5dfe83a368d5043d0b 612 Pfam PF07660 Secretin and TonB N terminus short domain 96 142 1.3E-7 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SCD_RS13210 633a45a5af060f5dfe83a368d5043d0b 612 Pfam PF07655 Secretin N-terminal domain 147 224 5.2E-15 T 22-04-2016 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 SCD_RS14900 e32aa28b336ab10cacbd68411598934a 727 Gene3D G3DSA:3.40.50.300 197 378 2.2E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14900 e32aa28b336ab10cacbd68411598934a 727 Pfam PF00271 Helicase conserved C-terminal domain 507 588 5.5E-5 T 22-04-2016 IPR001650 Helicase, C-terminal SCD_RS14900 e32aa28b336ab10cacbd68411598934a 727 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 727 23.535 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SCD_RS14900 e32aa28b336ab10cacbd68411598934a 727 SUPERFAMILY SSF52540 459 613 1.71E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14900 e32aa28b336ab10cacbd68411598934a 727 TIGRFAM TIGR00595 priA: primosomal protein N' 220 725 8.5E-172 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SCD_RS14900 e32aa28b336ab10cacbd68411598934a 727 PANTHER PTHR30580 1 727 2.4E-223 T 22-04-2016 SCD_RS14900 e32aa28b336ab10cacbd68411598934a 727 SMART SM00490 493 590 1.9E-4 T 22-04-2016 IPR001650 Helicase, C-terminal SCD_RS14900 e32aa28b336ab10cacbd68411598934a 727 Gene3D G3DSA:3.40.50.300 406 429 1.5E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14900 e32aa28b336ab10cacbd68411598934a 727 Gene3D G3DSA:3.40.50.300 494 634 1.5E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14900 e32aa28b336ab10cacbd68411598934a 727 SMART SM00487 194 390 1.6E-17 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SCD_RS14900 e32aa28b336ab10cacbd68411598934a 727 Pfam PF00270 DEAD/DEAH box helicase 199 360 6.5E-15 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SCD_RS14900 e32aa28b336ab10cacbd68411598934a 727 SUPERFAMILY SSF52540 195 373 1.71E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13205 5ca98b73823e41bcedad4c031b347ff2 281 PANTHER PTHR35894 2 278 6.6E-97 T 22-04-2016 SCD_RS13205 5ca98b73823e41bcedad4c031b347ff2 281 PANTHER PTHR35894:SF1 2 278 6.6E-97 T 22-04-2016 SCD_RS13205 5ca98b73823e41bcedad4c031b347ff2 281 SUPERFAMILY SSF52540 5 262 9.21E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13205 5ca98b73823e41bcedad4c031b347ff2 281 Pfam PF13401 AAA domain 41 171 1.4E-24 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS13205 5ca98b73823e41bcedad4c031b347ff2 281 Gene3D G3DSA:3.40.50.300 28 183 8.3E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00370 9e85b33e17495713f95434212d386daf 378 SUPERFAMILY SSF52540 6 344 9.57E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00370 9e85b33e17495713f95434212d386daf 378 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 200 214 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SCD_RS00370 9e85b33e17495713f95434212d386daf 378 PANTHER PTHR30486 10 358 1.4E-159 T 22-04-2016 SCD_RS00370 9e85b33e17495713f95434212d386daf 378 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 10 350 6.7E-141 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 SCD_RS00370 9e85b33e17495713f95434212d386daf 378 PANTHER PTHR30486:SF3 10 358 1.4E-159 T 22-04-2016 SCD_RS00370 9e85b33e17495713f95434212d386daf 378 Gene3D G3DSA:3.40.50.300 109 351 5.4E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00370 9e85b33e17495713f95434212d386daf 378 Pfam PF00437 Type II/IV secretion system protein 19 253 9.6E-39 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SCD_RS15700 f3ee766e1313661acd590243de8cc69d 181 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 6 179 1.4E-51 T 22-04-2016 IPR018707 Protein of unknown function DUF2219 SCD_RS15700 f3ee766e1313661acd590243de8cc69d 181 Gene3D G3DSA:2.40.128.140 6 178 1.0E-56 T 22-04-2016 SCD_RS12635 df881eaae3acbaeb4ebacfe99097ad21 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 7.3E-20 T 22-04-2016 SCD_RS12635 df881eaae3acbaeb4ebacfe99097ad21 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 311 327 7.3E-20 T 22-04-2016 SCD_RS12635 df881eaae3acbaeb4ebacfe99097ad21 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 7.3E-20 T 22-04-2016 SCD_RS12635 df881eaae3acbaeb4ebacfe99097ad21 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 311 7.3E-20 T 22-04-2016 SCD_RS12635 df881eaae3acbaeb4ebacfe99097ad21 409 Pfam PF01494 FAD binding domain 5 332 1.7E-28 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 SCD_RS12635 df881eaae3acbaeb4ebacfe99097ad21 409 SUPERFAMILY SSF51905 4 176 8.64E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS12635 df881eaae3acbaeb4ebacfe99097ad21 409 SUPERFAMILY SSF51905 283 398 8.64E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS12635 df881eaae3acbaeb4ebacfe99097ad21 409 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 310 323 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 SCD_RS12635 df881eaae3acbaeb4ebacfe99097ad21 409 Gene3D G3DSA:3.50.50.60 2 179 4.0E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS12635 df881eaae3acbaeb4ebacfe99097ad21 409 Gene3D G3DSA:3.50.50.60 294 332 4.0E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS12635 df881eaae3acbaeb4ebacfe99097ad21 409 PANTHER PTHR13789 4 405 5.9E-103 T 22-04-2016 SCD_RS12635 df881eaae3acbaeb4ebacfe99097ad21 409 PANTHER PTHR13789:SF5 4 405 5.9E-103 T 22-04-2016 SCD_RS12635 df881eaae3acbaeb4ebacfe99097ad21 409 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 405 4.0E-119 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 SCD_RS04210 e22fa1d4dcba0ef3b9d8b88d5efabd08 343 ProSitePatterns PS00321 recA signature. 214 222 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 SCD_RS04210 e22fa1d4dcba0ef3b9d8b88d5efabd08 343 Hamap MF_00268 Protein RecA [recA]. 5 330 52.297 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SCD_RS04210 e22fa1d4dcba0ef3b9d8b88d5efabd08 343 SUPERFAMILY SSF52540 4 268 2.03E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04210 e22fa1d4dcba0ef3b9d8b88d5efabd08 343 Gene3D G3DSA:3.40.50.300 35 268 3.9E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04210 e22fa1d4dcba0ef3b9d8b88d5efabd08 343 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 9.5E-174 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SCD_RS04210 e22fa1d4dcba0ef3b9d8b88d5efabd08 343 Gene3D G3DSA:3.30.250.10 269 327 3.2E-28 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal SCD_RS04210 e22fa1d4dcba0ef3b9d8b88d5efabd08 343 SMART SM00382 58 229 2.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS04210 e22fa1d4dcba0ef3b9d8b88d5efabd08 343 PRINTS PR00142 RecA protein signature 298 315 5.1E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SCD_RS04210 e22fa1d4dcba0ef3b9d8b88d5efabd08 343 PRINTS PR00142 RecA protein signature 94 123 5.1E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SCD_RS04210 e22fa1d4dcba0ef3b9d8b88d5efabd08 343 PRINTS PR00142 RecA protein signature 244 273 5.1E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SCD_RS04210 e22fa1d4dcba0ef3b9d8b88d5efabd08 343 PRINTS PR00142 RecA protein signature 166 195 5.1E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SCD_RS04210 e22fa1d4dcba0ef3b9d8b88d5efabd08 343 PRINTS PR00142 RecA protein signature 128 157 5.1E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SCD_RS04210 e22fa1d4dcba0ef3b9d8b88d5efabd08 343 PRINTS PR00142 RecA protein signature 211 239 5.1E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SCD_RS04210 e22fa1d4dcba0ef3b9d8b88d5efabd08 343 Pfam PF00154 recA bacterial DNA recombination protein 7 269 1.4E-147 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SCD_RS04210 e22fa1d4dcba0ef3b9d8b88d5efabd08 343 SUPERFAMILY SSF54752 269 327 6.41E-21 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal SCD_RS06325 56f78d96f1d867e698155d2f63cb6ec0 147 PANTHER PTHR30308 3 146 1.8E-72 T 22-04-2016 SCD_RS06325 56f78d96f1d867e698155d2f63cb6ec0 147 Hamap MF_00023 SsrA-binding protein [smpB]. 1 147 73.949 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SCD_RS06325 56f78d96f1d867e698155d2f63cb6ec0 147 SUPERFAMILY SSF74982 3 127 1.83E-50 T 22-04-2016 IPR023620 Small protein B SCD_RS06325 56f78d96f1d867e698155d2f63cb6ec0 147 Pfam PF01668 SmpB protein 3 65 1.6E-28 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SCD_RS06325 56f78d96f1d867e698155d2f63cb6ec0 147 PANTHER PTHR30308:SF2 3 146 1.8E-72 T 22-04-2016 SCD_RS06325 56f78d96f1d867e698155d2f63cb6ec0 147 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 3 127 2.0E-59 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SCD_RS06325 56f78d96f1d867e698155d2f63cb6ec0 147 ProSitePatterns PS01317 SsrA-binding protein. 21 33 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site SCD_RS06325 56f78d96f1d867e698155d2f63cb6ec0 147 TIGRFAM TIGR00086 smpB: SsrA-binding protein 3 144 6.1E-54 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SCD_RS06325 56f78d96f1d867e698155d2f63cb6ec0 147 Gene3D G3DSA:2.40.280.10 3 122 2.7E-49 T 22-04-2016 IPR023620 Small protein B SCD_RS01880 4bbc7d65f74bb91fa17494404ca33e2c 841 Hamap MF_01630 Nitrate reductase [napA]. 1 841 29.698 T 22-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 SCD_RS01880 4bbc7d65f74bb91fa17494404ca33e2c 841 PANTHER PTHR11615 656 841 0.0 T 22-04-2016 SCD_RS01880 4bbc7d65f74bb91fa17494404ca33e2c 841 PANTHER PTHR11615 358 609 0.0 T 22-04-2016 SCD_RS01880 4bbc7d65f74bb91fa17494404ca33e2c 841 PANTHER PTHR11615 41 301 0.0 T 22-04-2016 SCD_RS01880 4bbc7d65f74bb91fa17494404ca33e2c 841 Pfam PF00384 Molybdopterin oxidoreductase 98 581 1.3E-89 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SCD_RS01880 4bbc7d65f74bb91fa17494404ca33e2c 841 Pfam PF01568 Molydopterin dinucleotide binding domain 727 835 7.7E-24 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SCD_RS01880 4bbc7d65f74bb91fa17494404ca33e2c 841 Gene3D G3DSA:3.40.228.10 181 293 2.4E-56 T 22-04-2016 SCD_RS01880 4bbc7d65f74bb91fa17494404ca33e2c 841 Gene3D G3DSA:3.40.228.10 338 411 2.4E-56 T 22-04-2016 SCD_RS01880 4bbc7d65f74bb91fa17494404ca33e2c 841 SMART SM00926 41 95 5.9E-17 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SCD_RS01880 4bbc7d65f74bb91fa17494404ca33e2c 841 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 1.7E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SCD_RS01880 4bbc7d65f74bb91fa17494404ca33e2c 841 SUPERFAMILY SSF50692 701 841 4.75E-43 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SCD_RS01880 4bbc7d65f74bb91fa17494404ca33e2c 841 SUPERFAMILY SSF53706 40 713 2.36E-205 T 22-04-2016 SCD_RS01880 4bbc7d65f74bb91fa17494404ca33e2c 841 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 1.2E-18 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SCD_RS01880 4bbc7d65f74bb91fa17494404ca33e2c 841 Gene3D G3DSA:2.40.40.20 681 841 1.0E-47 T 22-04-2016 SCD_RS01880 4bbc7d65f74bb91fa17494404ca33e2c 841 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 841 0.0 T 22-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 SCD_RS01880 4bbc7d65f74bb91fa17494404ca33e2c 841 Gene3D G3DSA:2.20.25.90 40 97 1.5E-21 T 22-04-2016 SCD_RS01880 4bbc7d65f74bb91fa17494404ca33e2c 841 PANTHER PTHR11615:SF123 656 841 0.0 T 22-04-2016 SCD_RS01880 4bbc7d65f74bb91fa17494404ca33e2c 841 PANTHER PTHR11615:SF123 358 609 0.0 T 22-04-2016 SCD_RS01880 4bbc7d65f74bb91fa17494404ca33e2c 841 PANTHER PTHR11615:SF123 41 301 0.0 T 22-04-2016 SCD_RS01880 4bbc7d65f74bb91fa17494404ca33e2c 841 Gene3D G3DSA:3.40.50.740 634 680 1.9E-77 T 22-04-2016 SCD_RS01880 4bbc7d65f74bb91fa17494404ca33e2c 841 Gene3D G3DSA:3.40.50.740 412 588 1.9E-77 T 22-04-2016 SCD_RS01880 4bbc7d65f74bb91fa17494404ca33e2c 841 Gene3D G3DSA:3.40.50.740 98 180 1.9E-77 T 22-04-2016 SCD_RS03720 264a75c163fd45a22d1c8216ecbca887 402 Gene3D G3DSA:3.40.50.1950 2 186 1.6E-64 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SCD_RS03720 264a75c163fd45a22d1c8216ecbca887 402 SUPERFAMILY SSF52507 2 182 5.76E-61 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SCD_RS03720 264a75c163fd45a22d1c8216ecbca887 402 SUPERFAMILY SSF102645 184 394 9.42E-70 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SCD_RS03720 264a75c163fd45a22d1c8216ecbca887 402 Gene3D G3DSA:3.40.50.10300 187 395 1.6E-74 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SCD_RS03720 264a75c163fd45a22d1c8216ecbca887 402 PANTHER PTHR14359 5 393 1.5E-157 T 22-04-2016 SCD_RS03720 264a75c163fd45a22d1c8216ecbca887 402 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 6 389 1.1E-127 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 SCD_RS03720 264a75c163fd45a22d1c8216ecbca887 402 PANTHER PTHR14359:SF20 5 393 1.5E-157 T 22-04-2016 SCD_RS03720 264a75c163fd45a22d1c8216ecbca887 402 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 364 4.5E-62 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SCD_RS03720 264a75c163fd45a22d1c8216ecbca887 402 Pfam PF02441 Flavoprotein 7 135 1.6E-33 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SCD_RS12020 514f898580291c7f7a2823c3e678e2cd 710 Pfam PF00128 Alpha amylase, catalytic domain 198 282 1.2E-8 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SCD_RS12020 514f898580291c7f7a2823c3e678e2cd 710 SUPERFAMILY SSF81296 10 156 3.36E-47 T 22-04-2016 IPR014756 Immunoglobulin E-set SCD_RS12020 514f898580291c7f7a2823c3e678e2cd 710 Gene3D G3DSA:2.60.40.1180 594 705 1.4E-30 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta SCD_RS12020 514f898580291c7f7a2823c3e678e2cd 710 SUPERFAMILY SSF51011 595 705 6.55E-25 T 22-04-2016 SCD_RS12020 514f898580291c7f7a2823c3e678e2cd 710 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 17 103 4.4E-19 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 SCD_RS12020 514f898580291c7f7a2823c3e678e2cd 710 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 11 704 0.0 T 22-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 SCD_RS12020 514f898580291c7f7a2823c3e678e2cd 710 SUPERFAMILY SSF51445 145 477 5.58E-136 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SCD_RS12020 514f898580291c7f7a2823c3e678e2cd 710 SUPERFAMILY SSF51445 506 581 5.58E-136 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SCD_RS12020 514f898580291c7f7a2823c3e678e2cd 710 SMART SM00642 168 574 6.3E-8 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SCD_RS12020 514f898580291c7f7a2823c3e678e2cd 710 Gene3D G3DSA:3.20.20.80 162 582 2.7E-122 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SCD_RS12020 514f898580291c7f7a2823c3e678e2cd 710 Gene3D G3DSA:2.60.40.10 10 161 2.4E-54 T 22-04-2016 IPR013783 Immunoglobulin-like fold SCD_RS12020 514f898580291c7f7a2823c3e678e2cd 710 PANTHER PTHR10357:SF74 2 585 0.0 T 22-04-2016 SCD_RS12020 514f898580291c7f7a2823c3e678e2cd 710 PANTHER PTHR10357:SF74 612 706 0.0 T 22-04-2016 SCD_RS12020 514f898580291c7f7a2823c3e678e2cd 710 PANTHER PTHR10357 2 585 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SCD_RS12020 514f898580291c7f7a2823c3e678e2cd 710 PANTHER PTHR10357 612 706 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SCD_RS10575 114283652783880c745594de84d7a718 248 SMART SM00953 70 206 1.5E-20 T 22-04-2016 IPR014914 RES domain SCD_RS10575 114283652783880c745594de84d7a718 248 Pfam PF08808 RES domain 62 205 1.8E-23 T 22-04-2016 IPR014914 RES domain SCD_RS03190 3d436a8a3db7101e3dae38baac748128 171 PANTHER PTHR13718 14 170 4.8E-71 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 SCD_RS03190 3d436a8a3db7101e3dae38baac748128 171 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 168 34.089 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SCD_RS03190 3d436a8a3db7101e3dae38baac748128 171 SUPERFAMILY SSF54211 84 164 4.3E-27 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SCD_RS03190 3d436a8a3db7101e3dae38baac748128 171 ProSitePatterns PS00585 Ribosomal protein S5 signature. 33 65 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site SCD_RS03190 3d436a8a3db7101e3dae38baac748128 171 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 16 168 4.1E-64 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SCD_RS03190 3d436a8a3db7101e3dae38baac748128 171 SUPERFAMILY SSF54768 13 81 1.78E-22 T 22-04-2016 SCD_RS03190 3d436a8a3db7101e3dae38baac748128 171 Pfam PF00333 Ribosomal protein S5, N-terminal domain 16 80 7.4E-27 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 SCD_RS03190 3d436a8a3db7101e3dae38baac748128 171 Pfam PF03719 Ribosomal protein S5, C-terminal domain 92 162 2.3E-30 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 SCD_RS03190 3d436a8a3db7101e3dae38baac748128 171 Gene3D G3DSA:3.30.160.20 14 78 2.2E-27 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SCD_RS03190 3d436a8a3db7101e3dae38baac748128 171 Gene3D G3DSA:3.30.230.10 81 164 1.7E-32 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SCD_RS03205 e798c862dc98886550e6ae4b3e83b9bd 441 SUPERFAMILY SSF103491 13 420 6.93E-133 T 22-04-2016 IPR023201 SecY subunit domain SCD_RS03205 e798c862dc98886550e6ae4b3e83b9bd 441 PANTHER PTHR10906 17 441 1.4E-220 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SCD_RS03205 e798c862dc98886550e6ae4b3e83b9bd 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 22 40 5.8E-95 T 22-04-2016 SCD_RS03205 e798c862dc98886550e6ae4b3e83b9bd 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 115 138 5.8E-95 T 22-04-2016 SCD_RS03205 e798c862dc98886550e6ae4b3e83b9bd 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 311 333 5.8E-95 T 22-04-2016 SCD_RS03205 e798c862dc98886550e6ae4b3e83b9bd 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 150 175 5.8E-95 T 22-04-2016 SCD_RS03205 e798c862dc98886550e6ae4b3e83b9bd 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 398 416 5.8E-95 T 22-04-2016 SCD_RS03205 e798c862dc98886550e6ae4b3e83b9bd 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 366 384 5.8E-95 T 22-04-2016 SCD_RS03205 e798c862dc98886550e6ae4b3e83b9bd 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 176 199 5.8E-95 T 22-04-2016 SCD_RS03205 e798c862dc98886550e6ae4b3e83b9bd 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 74 94 5.8E-95 T 22-04-2016 SCD_RS03205 e798c862dc98886550e6ae4b3e83b9bd 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 268 287 5.8E-95 T 22-04-2016 SCD_RS03205 e798c862dc98886550e6ae4b3e83b9bd 441 PANTHER PTHR10906:SF2 17 441 1.4E-220 T 22-04-2016 SCD_RS03205 e798c862dc98886550e6ae4b3e83b9bd 441 Pfam PF00344 SecY translocase 75 413 1.9E-119 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SCD_RS03205 e798c862dc98886550e6ae4b3e83b9bd 441 Gene3D G3DSA:1.10.3370.10 14 433 1.0E-167 T 22-04-2016 IPR023201 SecY subunit domain SCD_RS03205 e798c862dc98886550e6ae4b3e83b9bd 441 ProSitePatterns PS00755 Protein secY signature 1. 75 94 - T 22-04-2016 IPR030659 SecY conserved site SCD_RS03205 e798c862dc98886550e6ae4b3e83b9bd 441 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 429 29.878 T 22-04-2016 IPR026593 Protein translocase subunit SecY SCD_RS03205 e798c862dc98886550e6ae4b3e83b9bd 441 ProSitePatterns PS00756 Protein secY signature 2. 169 186 - T 22-04-2016 IPR030659 SecY conserved site SCD_RS03205 e798c862dc98886550e6ae4b3e83b9bd 441 PIRSF PIRSF004557 5 436 1.8E-121 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SCD_RS03205 e798c862dc98886550e6ae4b3e83b9bd 441 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 19 425 1.0E-132 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SCD_RS14595 439938ef11131891bea3440461119178 212 TIGRFAM TIGR03027 pepcterm_export: putative polysaccharide export protein, PEP-CTERM sytem-associated 48 212 1.2E-76 T 22-04-2016 IPR017477 PEP-CTERM, putative polysaccharide export protein SCD_RS14595 439938ef11131891bea3440461119178 212 Pfam PF02563 Polysaccharide biosynthesis/export protein 45 117 1.2E-21 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 SCD_RS14595 439938ef11131891bea3440461119178 212 Gene3D G3DSA:3.10.560.10 121 209 1.1E-16 T 22-04-2016 SCD_RS14595 439938ef11131891bea3440461119178 212 Gene3D G3DSA:3.30.1950.10 52 120 2.0E-20 T 22-04-2016 SCD_RS14595 439938ef11131891bea3440461119178 212 PANTHER PTHR33619 44 208 8.9E-30 T 22-04-2016 SCD_RS04055 1f3453024fbb97dcce8793ffd4067b84 131 Pfam PF12279 Protein of unknown function (DUF3619) 7 126 8.0E-35 T 22-04-2016 IPR022064 Protein of unknown function DUF3619 SCD_RS08495 8fd8aad918fc58b45ac5651af5f5a3e9 905 SUPERFAMILY SSF46955 3 51 1.08E-9 T 22-04-2016 IPR009061 Putative DNA-binding domain SCD_RS08495 8fd8aad918fc58b45ac5651af5f5a3e9 905 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 60 98 1.2E-13 T 22-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial SCD_RS08495 8fd8aad918fc58b45ac5651af5f5a3e9 905 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 409 562 2.1E-29 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SCD_RS08495 8fd8aad918fc58b45ac5651af5f5a3e9 905 SUPERFAMILY SSF50447 578 660 6.45E-25 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SCD_RS08495 8fd8aad918fc58b45ac5651af5f5a3e9 905 SUPERFAMILY SSF50447 807 903 4.12E-34 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SCD_RS08495 8fd8aad918fc58b45ac5651af5f5a3e9 905 PANTHER PTHR23115 390 733 1.2E-200 T 22-04-2016 SCD_RS08495 8fd8aad918fc58b45ac5651af5f5a3e9 905 PANTHER PTHR23115 758 905 1.2E-200 T 22-04-2016 SCD_RS08495 8fd8aad918fc58b45ac5651af5f5a3e9 905 Gene3D G3DSA:3.30.56.50 3 51 2.6E-15 T 22-04-2016 SCD_RS08495 8fd8aad918fc58b45ac5651af5f5a3e9 905 Gene3D G3DSA:3.40.50.300 405 564 4.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08495 8fd8aad918fc58b45ac5651af5f5a3e9 905 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 325 904 1.0E-260 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SCD_RS08495 8fd8aad918fc58b45ac5651af5f5a3e9 905 Gene3D G3DSA:3.40.50.10050 706 784 2.4E-24 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SCD_RS08495 8fd8aad918fc58b45ac5651af5f5a3e9 905 Pfam PF11987 Translation-initiation factor 2 690 795 1.7E-36 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SCD_RS08495 8fd8aad918fc58b45ac5651af5f5a3e9 905 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 329 379 6.6E-14 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal SCD_RS08495 8fd8aad918fc58b45ac5651af5f5a3e9 905 Gene3D G3DSA:2.40.30.10 807 903 1.0E-36 T 22-04-2016 SCD_RS08495 8fd8aad918fc58b45ac5651af5f5a3e9 905 SUPERFAMILY SSF52156 683 812 1.31E-36 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SCD_RS08495 8fd8aad918fc58b45ac5651af5f5a3e9 905 SUPERFAMILY SSF52540 400 577 4.39E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08495 8fd8aad918fc58b45ac5651af5f5a3e9 905 Pfam PF00009 Elongation factor Tu GTP binding domain 410 565 1.4E-32 T 22-04-2016 SCD_RS08495 8fd8aad918fc58b45ac5651af5f5a3e9 905 Gene3D G3DSA:2.40.30.10 577 670 4.3E-25 T 22-04-2016 SCD_RS08495 8fd8aad918fc58b45ac5651af5f5a3e9 905 PANTHER PTHR23115:SF184 390 733 1.2E-200 T 22-04-2016 SCD_RS08495 8fd8aad918fc58b45ac5651af5f5a3e9 905 PANTHER PTHR23115:SF184 758 905 1.2E-200 T 22-04-2016 SCD_RS08495 8fd8aad918fc58b45ac5651af5f5a3e9 905 Pfam PF03144 Elongation factor Tu domain 2 826 891 1.8E-7 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SCD_RS08495 8fd8aad918fc58b45ac5651af5f5a3e9 905 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 903 17.497 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SCD_RS08970 7f317c2c617c7854dafe198b11123b64 359 PANTHER PTHR30544:SF5 4 356 1.8E-169 T 22-04-2016 SCD_RS08970 7f317c2c617c7854dafe198b11123b64 359 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 2 352 4.2E-137 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SCD_RS08970 7f317c2c617c7854dafe198b11123b64 359 Gene3D G3DSA:3.20.20.70 103 306 1.7E-12 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS08970 7f317c2c617c7854dafe198b11123b64 359 Pfam PF04055 Radical SAM superfamily 106 272 1.2E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SCD_RS08970 7f317c2c617c7854dafe198b11123b64 359 SUPERFAMILY SSF102114 98 308 4.58E-14 T 22-04-2016 SCD_RS08970 7f317c2c617c7854dafe198b11123b64 359 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 2 347 72.617 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SCD_RS08970 7f317c2c617c7854dafe198b11123b64 359 PIRSF PIRSF006004 1 359 1.5E-147 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SCD_RS08970 7f317c2c617c7854dafe198b11123b64 359 PANTHER PTHR30544 4 356 1.8E-169 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SCD_RS09395 e7809d027db39dae9b5d3a2ee706c731 300 PANTHER PTHR11088 1 282 2.3E-102 T 22-04-2016 SCD_RS09395 e7809d027db39dae9b5d3a2ee706c731 300 SUPERFAMILY SSF52540 1 139 1.09E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS09395 e7809d027db39dae9b5d3a2ee706c731 300 Gene3D G3DSA:1.10.287.890 193 275 1.1E-33 T 22-04-2016 SCD_RS09395 e7809d027db39dae9b5d3a2ee706c731 300 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 1 289 27.493 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SCD_RS09395 e7809d027db39dae9b5d3a2ee706c731 300 Gene3D G3DSA:3.40.50.300 1 162 9.9E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS09395 e7809d027db39dae9b5d3a2ee706c731 300 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 1 283 8.5E-97 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SCD_RS09395 e7809d027db39dae9b5d3a2ee706c731 300 Pfam PF01715 IPP transferase 30 276 5.8E-86 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SCD_RS04030 6edcce9a12ce2c67fdd59187d3216f5c 506 PRINTS PR00481 Cytosol aminopeptidase signature 380 395 1.08E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SCD_RS04030 6edcce9a12ce2c67fdd59187d3216f5c 506 PRINTS PR00481 Cytosol aminopeptidase signature 352 372 1.08E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SCD_RS04030 6edcce9a12ce2c67fdd59187d3216f5c 506 PRINTS PR00481 Cytosol aminopeptidase signature 330 351 1.08E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SCD_RS04030 6edcce9a12ce2c67fdd59187d3216f5c 506 PRINTS PR00481 Cytosol aminopeptidase signature 293 314 1.08E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SCD_RS04030 6edcce9a12ce2c67fdd59187d3216f5c 506 PRINTS PR00481 Cytosol aminopeptidase signature 271 288 1.08E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SCD_RS04030 6edcce9a12ce2c67fdd59187d3216f5c 506 Gene3D G3DSA:3.40.630.10 181 502 6.8E-144 T 22-04-2016 SCD_RS04030 6edcce9a12ce2c67fdd59187d3216f5c 506 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 356 363 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SCD_RS04030 6edcce9a12ce2c67fdd59187d3216f5c 506 PANTHER PTHR11963 7 505 1.3E-236 T 22-04-2016 SCD_RS04030 6edcce9a12ce2c67fdd59187d3216f5c 506 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 13 504 40.04 T 22-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 SCD_RS04030 6edcce9a12ce2c67fdd59187d3216f5c 506 Gene3D G3DSA:3.40.220.10 12 171 1.6E-57 T 22-04-2016 SCD_RS04030 6edcce9a12ce2c67fdd59187d3216f5c 506 PANTHER PTHR11963:SF13 7 505 1.3E-236 T 22-04-2016 SCD_RS04030 6edcce9a12ce2c67fdd59187d3216f5c 506 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 195 496 1.6E-124 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SCD_RS04030 6edcce9a12ce2c67fdd59187d3216f5c 506 SUPERFAMILY SSF52949 12 194 4.71E-47 T 22-04-2016 SCD_RS04030 6edcce9a12ce2c67fdd59187d3216f5c 506 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 29 157 2.7E-31 T 22-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SCD_RS04030 6edcce9a12ce2c67fdd59187d3216f5c 506 SUPERFAMILY SSF53187 189 502 9.42E-127 T 22-04-2016 SCD_RS05610 64a67ffe2f16c503add027e3f0f29c1a 292 PANTHER PTHR11795:SF398 1 292 6.3E-56 T 22-04-2016 SCD_RS05610 64a67ffe2f16c503add027e3f0f29c1a 292 PANTHER PTHR11795 1 292 6.3E-56 T 22-04-2016 SCD_RS05610 64a67ffe2f16c503add027e3f0f29c1a 292 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 275 1.6E-36 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SCD_RS14585 ddadea7d09cd014bed43c068840d3ba2 362 Pfam PF01761 3-dehydroquinate synthase 67 324 2.1E-108 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SCD_RS14585 ddadea7d09cd014bed43c068840d3ba2 362 SUPERFAMILY SSF56796 4 356 3.66E-121 T 22-04-2016 SCD_RS14585 ddadea7d09cd014bed43c068840d3ba2 362 PIRSF PIRSF001455 4 361 2.0E-109 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SCD_RS14585 ddadea7d09cd014bed43c068840d3ba2 362 Gene3D G3DSA:3.40.50.1970 2 172 4.6E-69 T 22-04-2016 SCD_RS14585 ddadea7d09cd014bed43c068840d3ba2 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 357 43.369 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SCD_RS14585 ddadea7d09cd014bed43c068840d3ba2 362 PANTHER PTHR21090 1 361 1.4E-202 T 22-04-2016 SCD_RS14585 ddadea7d09cd014bed43c068840d3ba2 362 Gene3D G3DSA:1.20.1090.10 173 356 6.2E-68 T 22-04-2016 SCD_RS14585 ddadea7d09cd014bed43c068840d3ba2 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 354 1.1E-117 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SCD_RS08845 aad096299d9ddd8834fbb33c10e6cb0b 355 SMART SM01005 231 355 9.7E-68 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SCD_RS08845 aad096299d9ddd8834fbb33c10e6cb0b 355 PRINTS PR00992 Alanine racemase signature 61 79 1.0E-69 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SCD_RS08845 aad096299d9ddd8834fbb33c10e6cb0b 355 PRINTS PR00992 Alanine racemase signature 247 262 1.0E-69 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SCD_RS08845 aad096299d9ddd8834fbb33c10e6cb0b 355 PRINTS PR00992 Alanine racemase signature 155 166 1.0E-69 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SCD_RS08845 aad096299d9ddd8834fbb33c10e6cb0b 355 PRINTS PR00992 Alanine racemase signature 27 43 1.0E-69 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SCD_RS08845 aad096299d9ddd8834fbb33c10e6cb0b 355 PRINTS PR00992 Alanine racemase signature 190 217 1.0E-69 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SCD_RS08845 aad096299d9ddd8834fbb33c10e6cb0b 355 PRINTS PR00992 Alanine racemase signature 264 279 1.0E-69 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SCD_RS08845 aad096299d9ddd8834fbb33c10e6cb0b 355 PRINTS PR00992 Alanine racemase signature 285 302 1.0E-69 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SCD_RS08845 aad096299d9ddd8834fbb33c10e6cb0b 355 PRINTS PR00992 Alanine racemase signature 337 350 1.0E-69 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SCD_RS08845 aad096299d9ddd8834fbb33c10e6cb0b 355 PRINTS PR00992 Alanine racemase signature 121 133 1.0E-69 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SCD_RS08845 aad096299d9ddd8834fbb33c10e6cb0b 355 PANTHER PTHR30511:SF4 1 350 6.1E-149 T 22-04-2016 SCD_RS08845 aad096299d9ddd8834fbb33c10e6cb0b 355 TIGRFAM TIGR00492 alr: alanine racemase 4 354 2.3E-114 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SCD_RS08845 aad096299d9ddd8834fbb33c10e6cb0b 355 PANTHER PTHR30511 1 350 6.1E-149 T 22-04-2016 SCD_RS08845 aad096299d9ddd8834fbb33c10e6cb0b 355 Gene3D G3DSA:3.20.20.10 11 213 3.4E-67 T 22-04-2016 IPR029066 PLP-binding barrel SCD_RS08845 aad096299d9ddd8834fbb33c10e6cb0b 355 Pfam PF01168 Alanine racemase, N-terminal domain 9 217 5.5E-69 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SCD_RS08845 aad096299d9ddd8834fbb33c10e6cb0b 355 Pfam PF00842 Alanine racemase, C-terminal domain 231 352 6.1E-39 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SCD_RS08845 aad096299d9ddd8834fbb33c10e6cb0b 355 SUPERFAMILY SSF50621 226 353 2.72E-46 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SCD_RS08845 aad096299d9ddd8834fbb33c10e6cb0b 355 SUPERFAMILY SSF51419 9 232 8.0E-67 T 22-04-2016 IPR029066 PLP-binding barrel SCD_RS08845 aad096299d9ddd8834fbb33c10e6cb0b 355 Gene3D G3DSA:2.40.37.10 214 353 1.8E-55 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SCD_RS08845 aad096299d9ddd8834fbb33c10e6cb0b 355 Hamap MF_01201 Alanine racemase. 2 355 35.831 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SCD_RS03965 4411a33fe25604cc7d08058deaa36659 113 SUPERFAMILY SSF52821 6 111 5.89E-33 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS03965 4411a33fe25604cc7d08058deaa36659 113 Gene3D G3DSA:3.40.250.10 9 111 1.6E-30 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS03965 4411a33fe25604cc7d08058deaa36659 113 Pfam PF00581 Rhodanese-like domain 20 104 9.7E-16 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS03965 4411a33fe25604cc7d08058deaa36659 113 SMART SM00450 13 108 5.2E-21 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS01370 cc2621e7a1a606441fecc317be4e1589 373 SUPERFAMILY SSF53335 162 311 1.48E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS01370 cc2621e7a1a606441fecc317be4e1589 373 Pfam PF05175 Methyltransferase small domain 198 309 3.1E-11 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SCD_RS01370 cc2621e7a1a606441fecc317be4e1589 373 PANTHER PTHR18895 200 329 7.0E-21 T 22-04-2016 SCD_RS01370 cc2621e7a1a606441fecc317be4e1589 373 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 262 268 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SCD_RS01370 cc2621e7a1a606441fecc317be4e1589 373 Gene3D G3DSA:3.40.50.150 159 344 2.9E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS12680 5698a4de41ac18fb4955daed9eeb3ebe 125 Gene3D G3DSA:3.10.180.10 1 124 2.9E-46 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SCD_RS12680 5698a4de41ac18fb4955daed9eeb3ebe 125 PANTHER PTHR10374 1 124 2.1E-58 T 22-04-2016 SCD_RS12680 5698a4de41ac18fb4955daed9eeb3ebe 125 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 125 8.7E-60 T 22-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 SCD_RS12680 5698a4de41ac18fb4955daed9eeb3ebe 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 122 1.3E-23 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SCD_RS12680 5698a4de41ac18fb4955daed9eeb3ebe 125 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 SCD_RS12680 5698a4de41ac18fb4955daed9eeb3ebe 125 SUPERFAMILY SSF54593 1 124 3.09E-37 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SCD_RS02530 ad70d725b130cc73aa5b17f16b7aa0a2 127 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 22-04-2016 IPR019897 RidA, conserved site SCD_RS02530 ad70d725b130cc73aa5b17f16b7aa0a2 127 PANTHER PTHR11803 1 122 3.6E-47 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family SCD_RS02530 ad70d725b130cc73aa5b17f16b7aa0a2 127 Pfam PF01042 Endoribonuclease L-PSP 9 123 9.8E-37 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family SCD_RS02530 ad70d725b130cc73aa5b17f16b7aa0a2 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 4.0E-47 T 22-04-2016 IPR006056 RidA family SCD_RS02530 ad70d725b130cc73aa5b17f16b7aa0a2 127 Gene3D G3DSA:3.30.1330.40 3 122 1.7E-45 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SCD_RS02530 ad70d725b130cc73aa5b17f16b7aa0a2 127 SUPERFAMILY SSF55298 1 123 1.37E-42 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SCD_RS00075 77df454cfb30e979e4e563e4c79eb6e3 424 Gene3D G3DSA:3.40.50.300 136 274 1.5E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00075 77df454cfb30e979e4e563e4c79eb6e3 424 Pfam PF00072 Response regulator receiver domain 6 116 1.5E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS00075 77df454cfb30e979e4e563e4c79eb6e3 424 Pfam PF02954 Bacterial regulatory protein, Fis family 373 413 1.8E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS00075 77df454cfb30e979e4e563e4c79eb6e3 424 SMART SM00448 4 116 4.9E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS00075 77df454cfb30e979e4e563e4c79eb6e3 424 PANTHER PTHR32071 3 423 4.9E-90 T 22-04-2016 SCD_RS00075 77df454cfb30e979e4e563e4c79eb6e3 424 Gene3D G3DSA:3.40.50.2300 5 124 6.8E-34 T 22-04-2016 SCD_RS00075 77df454cfb30e979e4e563e4c79eb6e3 424 PANTHER PTHR32071:SF17 3 423 4.9E-90 T 22-04-2016 SCD_RS00075 77df454cfb30e979e4e563e4c79eb6e3 424 SUPERFAMILY SSF46689 315 415 3.09E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS00075 77df454cfb30e979e4e563e4c79eb6e3 424 Gene3D G3DSA:1.10.8.60 275 348 6.5E-12 T 22-04-2016 SCD_RS00075 77df454cfb30e979e4e563e4c79eb6e3 424 SUPERFAMILY SSF52172 5 179 1.11E-37 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS00075 77df454cfb30e979e4e563e4c79eb6e3 424 SUPERFAMILY SSF52540 137 346 8.45E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00075 77df454cfb30e979e4e563e4c79eb6e3 424 Gene3D G3DSA:1.10.10.60 364 415 5.6E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS00075 77df454cfb30e979e4e563e4c79eb6e3 424 Pfam PF14532 Sigma-54 interaction domain 136 273 5.1E-40 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SCD_RS04415 78a324421c1c47934fbdcabdf82a5df9 163 Pfam PF02674 Colicin V production protein 4 143 5.4E-32 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 SCD_RS04415 78a324421c1c47934fbdcabdf82a5df9 163 PANTHER PTHR36926 1 133 7.9E-29 T 22-04-2016 SCD_RS04415 78a324421c1c47934fbdcabdf82a5df9 163 PANTHER PTHR36926:SF1 1 133 7.9E-29 T 22-04-2016 SCD_RS08055 404239913d08962c84a3ae6bb6cc4262 764 PIRSF PIRSF006076 1 764 1.7E-264 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SCD_RS08055 404239913d08962c84a3ae6bb6cc4262 764 PANTHER PTHR12815 2 764 1.3E-249 T 22-04-2016 SCD_RS08055 404239913d08962c84a3ae6bb6cc4262 764 PANTHER PTHR12815:SF11 2 764 1.3E-249 T 22-04-2016 SCD_RS08055 404239913d08962c84a3ae6bb6cc4262 764 Gene3D G3DSA:2.40.160.50 399 763 1.6E-23 T 22-04-2016 SCD_RS08055 404239913d08962c84a3ae6bb6cc4262 764 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 764 25.673 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SCD_RS08055 404239913d08962c84a3ae6bb6cc4262 764 Pfam PF01103 Surface antigen 448 764 3.4E-83 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 SCD_RS08055 404239913d08962c84a3ae6bb6cc4262 764 Pfam PF07244 Surface antigen variable number repeat 176 263 1.8E-17 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 SCD_RS08055 404239913d08962c84a3ae6bb6cc4262 764 Pfam PF07244 Surface antigen variable number repeat 93 172 4.6E-11 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 SCD_RS08055 404239913d08962c84a3ae6bb6cc4262 764 Pfam PF07244 Surface antigen variable number repeat 266 344 1.8E-14 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 SCD_RS08055 404239913d08962c84a3ae6bb6cc4262 764 Pfam PF07244 Surface antigen variable number repeat 347 421 1.7E-14 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 SCD_RS08055 404239913d08962c84a3ae6bb6cc4262 764 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 764 1.3E-280 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SCD_RS05970 d2fa0e623d597da7465253fa219f41ea 434 Pfam PF00654 Voltage gated chloride channel 67 412 1.1E-87 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SCD_RS05970 d2fa0e623d597da7465253fa219f41ea 434 PRINTS PR00762 Chloride channel signature 166 185 1.8E-29 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SCD_RS05970 d2fa0e623d597da7465253fa219f41ea 434 PRINTS PR00762 Chloride channel signature 380 399 1.8E-29 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SCD_RS05970 d2fa0e623d597da7465253fa219f41ea 434 PRINTS PR00762 Chloride channel signature 362 378 1.8E-29 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SCD_RS05970 d2fa0e623d597da7465253fa219f41ea 434 PRINTS PR00762 Chloride channel signature 80 97 1.8E-29 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SCD_RS05970 d2fa0e623d597da7465253fa219f41ea 434 PRINTS PR00762 Chloride channel signature 114 133 1.8E-29 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SCD_RS05970 d2fa0e623d597da7465253fa219f41ea 434 PRINTS PR00762 Chloride channel signature 333 353 1.8E-29 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SCD_RS05970 d2fa0e623d597da7465253fa219f41ea 434 Gene3D G3DSA:1.10.3080.10 15 425 2.5E-77 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SCD_RS05970 d2fa0e623d597da7465253fa219f41ea 434 SUPERFAMILY SSF81340 12 428 6.41E-98 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SCD_RS05970 d2fa0e623d597da7465253fa219f41ea 434 PANTHER PTHR11689 29 420 2.0E-57 T 22-04-2016 SCD_RS09050 2f58e519c0035717f9d0d1beae48728f 229 PANTHER PTHR35603 137 222 1.2E-17 T 22-04-2016 SCD_RS09050 2f58e519c0035717f9d0d1beae48728f 229 Pfam PF05433 Glycine zipper 2TM domain 142 181 1.8E-9 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 SCD_RS09050 2f58e519c0035717f9d0d1beae48728f 229 PANTHER PTHR35603:SF2 137 222 1.2E-17 T 22-04-2016 SCD_RS13300 f183bf8adc7a057ae65d7912a28f442c 155 Pfam PF06347 Bacterial SH3 domain 37 90 3.4E-8 T 22-04-2016 IPR010466 Protein of unknown function DUF1058 SCD_RS13300 f183bf8adc7a057ae65d7912a28f442c 155 Pfam PF06347 Bacterial SH3 domain 99 154 4.9E-8 T 22-04-2016 IPR010466 Protein of unknown function DUF1058 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 Gene3D G3DSA:1.25.40.10 460 622 4.1E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 Pfam PF14559 Tetratricopeptide repeat 286 347 3.1E-7 T 22-04-2016 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 Pfam PF14559 Tetratricopeptide repeat 624 684 2.1E-6 T 22-04-2016 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 Gene3D G3DSA:1.25.40.10 34 263 3.8E-47 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 SUPERFAMILY SSF48452 135 344 1.52E-34 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 Gene3D G3DSA:1.25.40.10 644 908 2.9E-36 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 Gene3D G3DSA:1.25.40.10 264 459 5.5E-25 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 SUPERFAMILY SSF48452 34 157 1.3E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 Pfam PF13432 Tetratricopeptide repeat 42 101 2.7E-4 T 22-04-2016 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 Pfam PF13432 Tetratricopeptide repeat 685 746 1.8E-5 T 22-04-2016 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 Pfam PF13432 Tetratricopeptide repeat 213 272 6.2E-4 T 22-04-2016 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 Pfam PF13432 Tetratricopeptide repeat 144 204 3.5E-7 T 22-04-2016 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 SUPERFAMILY SSF48452 305 425 1.03E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 TIGRFAM TIGR02917 PEP_TPR_lipo: putative PEP-CTERM system TPR-repeat lipoprotein 19 910 1.6E-289 T 22-04-2016 IPR014266 PEP-CTERM system TPR-repeat lipoprotein, putative SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 Pfam PF07719 Tetratricopeptide repeat 479 509 3.2E-6 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 PANTHER PTHR23083 815 911 6.4E-67 T 22-04-2016 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 PANTHER PTHR23083 43 317 6.4E-67 T 22-04-2016 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 PANTHER PTHR23083 453 543 6.4E-67 T 22-04-2016 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 SMART SM00028 36 69 13.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 SMART SM00028 816 848 14.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 SMART SM00028 206 239 3.9E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 SMART SM00028 172 205 14.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 SMART SM00028 138 171 9.0E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 SMART SM00028 70 103 35.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 SMART SM00028 376 409 0.54 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 SMART SM00028 579 612 28.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 SMART SM00028 511 544 320.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 SMART SM00028 477 510 5.3E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 SMART SM00028 308 341 190.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 SMART SM00028 613 646 23.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 SMART SM00028 240 273 15.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 SMART SM00028 647 680 370.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 SMART SM00028 715 748 2.5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 SMART SM00028 274 307 220.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 SUPERFAMILY SSF48452 695 912 7.6E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS14820 eb23237c0dc5e0f16571081af80a9d03 933 SUPERFAMILY SSF48452 456 713 1.33E-29 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS07680 e063a7989ff7a2aace557df8834a84c1 405 PANTHER PTHR11751 21 405 3.0E-164 T 22-04-2016 SCD_RS07680 e063a7989ff7a2aace557df8834a84c1 405 Pfam PF00155 Aminotransferase class I and II 39 400 4.9E-76 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SCD_RS07680 e063a7989ff7a2aace557df8834a84c1 405 Gene3D G3DSA:3.40.640.10 52 283 2.7E-72 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS07680 e063a7989ff7a2aace557df8834a84c1 405 SUPERFAMILY SSF53383 11 404 4.89E-114 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS07680 e063a7989ff7a2aace557df8834a84c1 405 PANTHER PTHR11751:SF306 21 405 3.0E-164 T 22-04-2016 SCD_RS07680 e063a7989ff7a2aace557df8834a84c1 405 Gene3D G3DSA:3.90.1150.10 284 405 4.0E-40 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS07680 e063a7989ff7a2aace557df8834a84c1 405 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 SCD_RS04200 3968c8232dd9c40040d87d9a85e7ed37 162 PIRSF PIRSF006162 7 161 1.0E-42 T 22-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SCD_RS04200 3968c8232dd9c40040d87d9a85e7ed37 162 Pfam PF04608 Phosphatidylglycerophosphatase A 16 155 1.3E-48 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 SCD_RS04200 3968c8232dd9c40040d87d9a85e7ed37 162 SUPERFAMILY SSF101307 10 159 2.09E-39 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 SCD_RS04200 3968c8232dd9c40040d87d9a85e7ed37 162 PANTHER PTHR36305 2 162 1.6E-49 T 22-04-2016 SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 Gene3D G3DSA:3.30.450.20 658 782 2.0E-23 T 22-04-2016 SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 Gene3D G3DSA:3.30.450.20 538 657 1.4E-29 T 22-04-2016 SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 Gene3D G3DSA:3.30.450.20 783 906 1.3E-18 T 22-04-2016 SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 SUPERFAMILY SSF55874 996 1160 1.57E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 Gene3D G3DSA:3.30.450.20 293 413 2.6E-22 T 22-04-2016 SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 Gene3D G3DSA:3.30.450.20 414 537 7.7E-19 T 22-04-2016 SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 SMART SM01079 52 231 1.5E-41 T 22-04-2016 IPR006189 CHASE domain SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 Gene3D G3DSA:3.30.565.10 1008 1159 2.4E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 Pfam PF00989 PAS fold 798 905 9.8E-6 T 22-04-2016 IPR013767 PAS fold GO:0006355 SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1051 1159 1.3E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 SUPERFAMILY SSF55785 413 538 1.4E-21 T 22-04-2016 IPR000014 PAS domain SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 SMART SM00086 623 660 3.8E-4 T 22-04-2016 IPR001610 PAC motif SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 SMART SM00086 743 785 0.11 T 22-04-2016 IPR001610 PAC motif SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 SMART SM00086 868 908 3.6 T 22-04-2016 IPR001610 PAC motif SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 SMART SM00086 500 540 450.0 T 22-04-2016 IPR001610 PAC motif SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 SMART SM00086 374 416 3.2 T 22-04-2016 IPR001610 PAC motif SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 SUPERFAMILY SSF55785 657 783 1.92E-23 T 22-04-2016 IPR000014 PAS domain SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 SUPERFAMILY SSF55785 782 906 6.6E-20 T 22-04-2016 IPR000014 PAS domain SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1122 1140 3.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1089 1103 3.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1146 1159 3.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 Pfam PF13426 PAS domain 562 659 4.0E-15 T 22-04-2016 IPR000014 PAS domain SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 Pfam PF08448 PAS fold 679 787 3.5E-14 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 Pfam PF08448 PAS fold 435 540 2.7E-17 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 Pfam PF08448 PAS fold 307 418 5.1E-18 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 668 792 1.5E-17 T 22-04-2016 IPR000014 PAS domain SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 548 667 3.2E-28 T 22-04-2016 IPR000014 PAS domain SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 301 422 2.3E-21 T 22-04-2016 IPR000014 PAS domain SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 793 913 2.1E-11 T 22-04-2016 IPR000014 PAS domain SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 429 544 5.8E-11 T 22-04-2016 IPR000014 PAS domain SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 SUPERFAMILY SSF55785 537 658 1.14E-27 T 22-04-2016 IPR000014 PAS domain SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 SMART SM00387 1050 1160 1.6E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 Gene3D G3DSA:1.10.287.130 932 1003 1.9E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 PANTHER PTHR24423 529 675 7.2E-107 T 22-04-2016 SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 PANTHER PTHR24423 795 1160 7.2E-107 T 22-04-2016 SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 SUPERFAMILY SSF47384 923 1006 5.1E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 Pfam PF03924 CHASE domain 113 229 2.7E-21 T 22-04-2016 IPR006189 CHASE domain SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 SMART SM00388 939 1007 2.6E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 SUPERFAMILY SSF55785 288 414 9.77E-23 T 22-04-2016 IPR000014 PAS domain SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 Pfam PF00512 His Kinase A (phospho-acceptor) domain 940 1006 2.1E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 SMART SM00091 301 367 2.1E-9 T 22-04-2016 IPR000014 PAS domain SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 SMART SM00091 552 618 8.8E-9 T 22-04-2016 IPR000014 PAS domain SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 SMART SM00091 672 737 4.2 T 22-04-2016 IPR000014 PAS domain SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 SMART SM00091 428 494 0.0037 T 22-04-2016 IPR000014 PAS domain SCD_RS15625 194310819f77d24eeed47ec5a77b4bab 1160 SMART SM00091 797 865 0.29 T 22-04-2016 IPR000014 PAS domain SCD_RS07320 ea8ff76dcd77b957626a99f8f737a5a5 400 Gene3D G3DSA:1.10.240.10 275 365 5.4E-31 T 22-04-2016 SCD_RS07320 ea8ff76dcd77b957626a99f8f737a5a5 400 SUPERFAMILY SSF52374 5 172 1.78E-89 T 22-04-2016 SCD_RS07320 ea8ff76dcd77b957626a99f8f737a5a5 400 SUPERFAMILY SSF52374 243 397 1.78E-89 T 22-04-2016 SCD_RS07320 ea8ff76dcd77b957626a99f8f737a5a5 400 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 4 177 3.3E-59 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SCD_RS07320 ea8ff76dcd77b957626a99f8f737a5a5 400 Pfam PF00579 tRNA synthetases class I (W and Y) 243 348 1.1E-10 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS07320 ea8ff76dcd77b957626a99f8f737a5a5 400 Pfam PF00579 tRNA synthetases class I (W and Y) 5 170 1.7E-50 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS07320 ea8ff76dcd77b957626a99f8f737a5a5 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 4.8E-22 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SCD_RS07320 ea8ff76dcd77b957626a99f8f737a5a5 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 145 166 4.8E-22 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SCD_RS07320 ea8ff76dcd77b957626a99f8f737a5a5 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 4.8E-22 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SCD_RS07320 ea8ff76dcd77b957626a99f8f737a5a5 400 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS07320 ea8ff76dcd77b957626a99f8f737a5a5 400 PANTHER PTHR10055 4 171 7.5E-158 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SCD_RS07320 ea8ff76dcd77b957626a99f8f737a5a5 400 PANTHER PTHR10055 242 399 7.5E-158 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SCD_RS07320 ea8ff76dcd77b957626a99f8f737a5a5 400 PANTHER PTHR10055:SF6 4 171 7.5E-158 T 22-04-2016 SCD_RS07320 ea8ff76dcd77b957626a99f8f737a5a5 400 PANTHER PTHR10055:SF6 242 399 7.5E-158 T 22-04-2016 SCD_RS07320 ea8ff76dcd77b957626a99f8f737a5a5 400 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 398 35.654 T 22-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 SCD_RS07320 ea8ff76dcd77b957626a99f8f737a5a5 400 Gene3D G3DSA:3.40.50.620 241 274 1.8E-88 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS07320 ea8ff76dcd77b957626a99f8f737a5a5 400 Gene3D G3DSA:3.40.50.620 4 170 1.8E-88 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS04705 c9253ab0953fa9c0e3df3af5ec1d79f6 345 PANTHER PTHR11432:SF3 7 332 4.0E-162 T 22-04-2016 SCD_RS04705 c9253ab0953fa9c0e3df3af5ec1d79f6 345 PANTHER PTHR11432 7 332 4.0E-162 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 SCD_RS04705 c9253ab0953fa9c0e3df3af5ec1d79f6 345 Pfam PF00146 NADH dehydrogenase 24 332 2.5E-125 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 SCD_RS04705 c9253ab0953fa9c0e3df3af5ec1d79f6 345 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 221 233 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 SCD_RS04705 c9253ab0953fa9c0e3df3af5ec1d79f6 345 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 17 339 24.693 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 SCD_RS15895 5d8c88cde8462de4832b00ef2eb6b1d5 543 Gene3D G3DSA:1.10.287.950 296 512 5.8E-57 T 22-04-2016 SCD_RS15895 5d8c88cde8462de4832b00ef2eb6b1d5 543 Pfam PF00672 HAMP domain 195 259 1.2E-16 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS15895 5d8c88cde8462de4832b00ef2eb6b1d5 543 SMART SM00304 214 266 8.8E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS15895 5d8c88cde8462de4832b00ef2eb6b1d5 543 PANTHER PTHR32089 1 169 7.6E-115 T 22-04-2016 SCD_RS15895 5d8c88cde8462de4832b00ef2eb6b1d5 543 PANTHER PTHR32089 188 543 7.6E-115 T 22-04-2016 SCD_RS15895 5d8c88cde8462de4832b00ef2eb6b1d5 543 SUPERFAMILY SSF58104 234 543 1.83E-77 T 22-04-2016 SCD_RS15895 5d8c88cde8462de4832b00ef2eb6b1d5 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 183 5.6E-31 T 22-04-2016 IPR024478 4HB MCP domain SCD_RS15895 5d8c88cde8462de4832b00ef2eb6b1d5 543 SMART SM00283 281 542 3.4E-78 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SCD_RS15895 5d8c88cde8462de4832b00ef2eb6b1d5 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 541 2.2E-51 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SCD_RS08465 bbde85271f354282d2bb10a5244ccc05 140 PRINTS PR00618 DksA/TraR zinc finger signature 103 114 3.7E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria SCD_RS08465 bbde85271f354282d2bb10a5244ccc05 140 PRINTS PR00618 DksA/TraR zinc finger signature 115 127 3.7E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria SCD_RS08465 bbde85271f354282d2bb10a5244ccc05 140 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 99 129 3.5E-12 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 SCD_RS08465 bbde85271f354282d2bb10a5244ccc05 140 PANTHER PTHR33823:SF2 1 137 2.4E-53 T 22-04-2016 SCD_RS08465 bbde85271f354282d2bb10a5244ccc05 140 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 17 139 28.823 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 SCD_RS08465 bbde85271f354282d2bb10a5244ccc05 140 SUPERFAMILY SSF57716 100 138 5.23E-11 T 22-04-2016 SCD_RS08465 bbde85271f354282d2bb10a5244ccc05 140 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 103 127 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site SCD_RS08465 bbde85271f354282d2bb10a5244ccc05 140 SUPERFAMILY SSF109635 8 97 5.49E-32 T 22-04-2016 SCD_RS08465 bbde85271f354282d2bb10a5244ccc05 140 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 21 129 2.4E-50 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 SCD_RS08465 bbde85271f354282d2bb10a5244ccc05 140 PANTHER PTHR33823 1 137 2.4E-53 T 22-04-2016 SCD_RS15585 27ac9181f2a80458a6bd70b4fa14cb09 897 SUPERFAMILY SSF55073 475 632 5.1E-50 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS15585 27ac9181f2a80458a6bd70b4fa14cb09 897 SUPERFAMILY SSF141868 648 894 6.67E-83 T 22-04-2016 IPR001633 EAL domain SCD_RS15585 27ac9181f2a80458a6bd70b4fa14cb09 897 Pfam PF00990 Diguanylate cyclase, GGDEF domain 470 627 2.1E-50 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15585 27ac9181f2a80458a6bd70b4fa14cb09 897 Pfam PF00563 EAL domain 648 881 7.5E-68 T 22-04-2016 IPR001633 EAL domain SCD_RS15585 27ac9181f2a80458a6bd70b4fa14cb09 897 Gene3D G3DSA:3.30.70.270 472 634 3.3E-58 T 22-04-2016 SCD_RS15585 27ac9181f2a80458a6bd70b4fa14cb09 897 Gene3D G3DSA:3.30.450.20 353 470 8.6E-11 T 22-04-2016 SCD_RS15585 27ac9181f2a80458a6bd70b4fa14cb09 897 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 467 629 8.8E-47 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15585 27ac9181f2a80458a6bd70b4fa14cb09 897 PANTHER PTHR33121 645 896 1.1E-71 T 22-04-2016 SCD_RS15585 27ac9181f2a80458a6bd70b4fa14cb09 897 PANTHER PTHR33121:SF13 645 896 1.1E-71 T 22-04-2016 SCD_RS15585 27ac9181f2a80458a6bd70b4fa14cb09 897 SUPERFAMILY SSF55785 354 458 1.4E-9 T 22-04-2016 IPR000014 PAS domain SCD_RS15585 27ac9181f2a80458a6bd70b4fa14cb09 897 SMART SM00267 459 631 9.3E-63 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15585 27ac9181f2a80458a6bd70b4fa14cb09 897 Pfam PF08448 PAS fold 354 459 8.8E-6 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS15585 27ac9181f2a80458a6bd70b4fa14cb09 897 SMART SM00052 642 886 1.2E-100 T 22-04-2016 IPR001633 EAL domain SCD_RS15585 27ac9181f2a80458a6bd70b4fa14cb09 897 Gene3D G3DSA:3.20.20.450 646 894 5.2E-89 T 22-04-2016 IPR001633 EAL domain SCD_RS07525 60b363b61ba53a104f8882b546b39b5c 182 PANTHER PTHR33741 8 182 4.7E-50 T 22-04-2016 SCD_RS07525 60b363b61ba53a104f8882b546b39b5c 182 Pfam PF04982 HPP family 56 178 6.1E-45 T 22-04-2016 IPR007065 HPP SCD_RS07525 60b363b61ba53a104f8882b546b39b5c 182 PANTHER PTHR33741:SF1 8 182 4.7E-50 T 22-04-2016 SCD_RS15915 73f4a64cd63203c38c44f2215f1e90b1 207 SUPERFAMILY SSF54427 94 202 2.6E-14 T 22-04-2016 IPR032710 NTF2-like domain SCD_RS15915 73f4a64cd63203c38c44f2215f1e90b1 207 Gene3D G3DSA:3.10.450.50 95 201 4.3E-4 T 22-04-2016 IPR032710 NTF2-like domain SCD_RS11565 bd1b5a2c475a3fd63672fad6770bf41b 188 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 24 185 2.6E-47 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SCD_RS11565 bd1b5a2c475a3fd63672fad6770bf41b 188 PANTHER PTHR11071:SF192 26 187 3.6E-60 T 22-04-2016 SCD_RS11565 bd1b5a2c475a3fd63672fad6770bf41b 188 PANTHER PTHR11071 26 187 3.6E-60 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SCD_RS11565 bd1b5a2c475a3fd63672fad6770bf41b 188 Gene3D G3DSA:2.40.100.10 22 186 5.0E-53 T 22-04-2016 IPR029000 Cyclophilin-like domain SCD_RS11565 bd1b5a2c475a3fd63672fad6770bf41b 188 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 SCD_RS11565 bd1b5a2c475a3fd63672fad6770bf41b 188 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 38 53 3.5E-14 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SCD_RS11565 bd1b5a2c475a3fd63672fad6770bf41b 188 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 141 156 3.5E-14 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SCD_RS11565 bd1b5a2c475a3fd63672fad6770bf41b 188 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 3.5E-14 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SCD_RS11565 bd1b5a2c475a3fd63672fad6770bf41b 188 SUPERFAMILY SSF50891 21 186 8.18E-56 T 22-04-2016 IPR029000 Cyclophilin-like domain SCD_RS14215 2ea97987d934cfa0d556632aa846ec88 337 PANTHER PTHR22926 17 337 5.8E-64 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SCD_RS14215 2ea97987d934cfa0d556632aa846ec88 337 Pfam PF00953 Glycosyl transferase family 4 82 221 9.6E-26 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SCD_RS14215 2ea97987d934cfa0d556632aa846ec88 337 PANTHER PTHR22926:SF3 17 337 5.8E-64 T 22-04-2016 SCD_RS01950 497eaae0556d8e80d56985d1434a4c6f 503 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 SCD_RS01950 497eaae0556d8e80d56985d1434a4c6f 503 PANTHER PTHR10314:SF30 1 358 1.9E-216 T 22-04-2016 SCD_RS01950 497eaae0556d8e80d56985d1434a4c6f 503 SUPERFAMILY SSF53686 4 355 1.44E-104 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SCD_RS01950 497eaae0556d8e80d56985d1434a4c6f 503 Gene3D G3DSA:3.40.50.1100 69 325 4.1E-87 T 22-04-2016 SCD_RS01950 497eaae0556d8e80d56985d1434a4c6f 503 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 306 1.4E-82 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SCD_RS01950 497eaae0556d8e80d56985d1434a4c6f 503 Gene3D G3DSA:3.40.1020.10 377 502 4.6E-48 T 22-04-2016 SCD_RS01950 497eaae0556d8e80d56985d1434a4c6f 503 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 4 502 1.6E-254 T 22-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 SCD_RS01950 497eaae0556d8e80d56985d1434a4c6f 503 SUPERFAMILY SSF55021 409 502 5.49E-29 T 22-04-2016 SCD_RS01950 497eaae0556d8e80d56985d1434a4c6f 503 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 319 408 2.6E-26 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 SCD_RS01950 497eaae0556d8e80d56985d1434a4c6f 503 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 419 502 7.8E-28 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 SCD_RS01950 497eaae0556d8e80d56985d1434a4c6f 503 PANTHER PTHR10314 1 358 1.9E-216 T 22-04-2016 SCD_RS06115 fa09942ff6438eac048ec6566ac4b120 333 SUPERFAMILY SSF103039 54 229 2.43E-23 T 22-04-2016 IPR028976 CheC-like domain SCD_RS06115 fa09942ff6438eac048ec6566ac4b120 333 SUPERFAMILY SSF103039 5 14 2.43E-23 T 22-04-2016 IPR028976 CheC-like domain SCD_RS06115 fa09942ff6438eac048ec6566ac4b120 333 PANTHER PTHR30034 2 319 2.5E-137 T 22-04-2016 SCD_RS06115 fa09942ff6438eac048ec6566ac4b120 333 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 319 1.7E-109 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SCD_RS06115 fa09942ff6438eac048ec6566ac4b120 333 SUPERFAMILY SSF101801 248 323 1.7E-13 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) SCD_RS06115 fa09942ff6438eac048ec6566ac4b120 333 PANTHER PTHR30034:SF0 2 319 2.5E-137 T 22-04-2016 SCD_RS06115 fa09942ff6438eac048ec6566ac4b120 333 Pfam PF02154 Flagellar motor switch protein FliM 37 229 1.7E-75 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SCD_RS06115 fa09942ff6438eac048ec6566ac4b120 333 Gene3D G3DSA:2.30.330.10 241 323 1.6E-8 T 22-04-2016 SCD_RS06115 fa09942ff6438eac048ec6566ac4b120 333 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 251 319 1.4E-18 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) SCD_RS06115 fa09942ff6438eac048ec6566ac4b120 333 PIRSF PIRSF002888 2 326 5.2E-98 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SCD_RS06115 fa09942ff6438eac048ec6566ac4b120 333 Gene3D G3DSA:3.40.1550.10 67 227 2.5E-5 T 22-04-2016 IPR028976 CheC-like domain SCD_RS06115 fa09942ff6438eac048ec6566ac4b120 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 3.5E-27 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SCD_RS06115 fa09942ff6438eac048ec6566ac4b120 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 3.5E-27 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SCD_RS06115 fa09942ff6438eac048ec6566ac4b120 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 3.5E-27 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SCD_RS06115 fa09942ff6438eac048ec6566ac4b120 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 3.5E-27 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SCD_RS09985 d56078c6ae5290bcc750f2ec98645f9e 142 PANTHER PTHR31964 4 142 5.2E-28 T 22-04-2016 SCD_RS09985 d56078c6ae5290bcc750f2ec98645f9e 142 SUPERFAMILY SSF52402 4 142 1.47E-33 T 22-04-2016 SCD_RS09985 d56078c6ae5290bcc750f2ec98645f9e 142 PRINTS PR01438 Universal stress protein signature 102 114 4.2E-14 T 22-04-2016 IPR006015 Universal stress protein A SCD_RS09985 d56078c6ae5290bcc750f2ec98645f9e 142 PRINTS PR01438 Universal stress protein signature 2 20 4.2E-14 T 22-04-2016 IPR006015 Universal stress protein A SCD_RS09985 d56078c6ae5290bcc750f2ec98645f9e 142 PRINTS PR01438 Universal stress protein signature 120 142 4.2E-14 T 22-04-2016 IPR006015 Universal stress protein A SCD_RS09985 d56078c6ae5290bcc750f2ec98645f9e 142 PANTHER PTHR31964:SF45 4 142 5.2E-28 T 22-04-2016 SCD_RS09985 d56078c6ae5290bcc750f2ec98645f9e 142 Pfam PF00582 Universal stress protein family 4 142 1.3E-28 T 22-04-2016 IPR006016 UspA GO:0006950 SCD_RS09985 d56078c6ae5290bcc750f2ec98645f9e 142 Gene3D G3DSA:3.40.50.620 4 142 1.1E-35 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS05335 8d13874e88e693121cd04be94888e7b0 528 Pfam PF14072 DNA-sulfur modification-associated 46 469 3.4E-22 T 22-04-2016 IPR017642 DNA sulphur modification protein DndB SCD_RS05335 8d13874e88e693121cd04be94888e7b0 528 TIGRFAM TIGR03187 DGQHR: DGQHR domain 233 419 7.9E-18 T 22-04-2016 IPR017601 DGQHR-containing domain SCD_RS05335 8d13874e88e693121cd04be94888e7b0 528 TIGRFAM TIGR03187 DGQHR: DGQHR domain 42 188 7.8E-23 T 22-04-2016 IPR017601 DGQHR-containing domain SCD_RS04425 bdb69850e7d34a6d5d17d32043d568a1 392 SUPERFAMILY SSF53383 29 391 2.26E-120 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS04425 bdb69850e7d34a6d5d17d32043d568a1 392 PIRSF PIRSF001434 1 392 1.6E-131 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SCD_RS04425 bdb69850e7d34a6d5d17d32043d568a1 392 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 391 2.1E-141 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SCD_RS04425 bdb69850e7d34a6d5d17d32043d568a1 392 Gene3D G3DSA:3.90.1150.10 258 391 7.9E-50 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS04425 bdb69850e7d34a6d5d17d32043d568a1 392 PANTHER PTHR11808:SF36 2 390 7.9E-204 T 22-04-2016 SCD_RS04425 bdb69850e7d34a6d5d17d32043d568a1 392 PANTHER PTHR11808 2 390 7.9E-204 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SCD_RS04425 bdb69850e7d34a6d5d17d32043d568a1 392 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 10 390 3.1E-185 T 22-04-2016 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 UniPathway: UPA00051 SCD_RS04425 bdb69850e7d34a6d5d17d32043d568a1 392 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 201 215 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SCD_RS04425 bdb69850e7d34a6d5d17d32043d568a1 392 Gene3D G3DSA:3.40.640.10 9 257 3.0E-92 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS04715 610bedecb40bcd98039824ad0946a1ec 200 PANTHER PTHR33269 1 194 4.8E-57 T 22-04-2016 SCD_RS04715 610bedecb40bcd98039824ad0946a1ec 200 PANTHER PTHR33269:SF1 1 194 4.8E-57 T 22-04-2016 SCD_RS04715 610bedecb40bcd98039824ad0946a1ec 200 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 19 163 2.6E-39 T 22-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 SCD_RS14150 ed50d80119150b96ad5e4cbfaf9af9d7 364 SUPERFAMILY SSF53756 13 357 1.63E-86 T 22-04-2016 SCD_RS14150 ed50d80119150b96ad5e4cbfaf9af9d7 364 Gene3D G3DSA:3.40.50.2000 185 357 2.2E-57 T 22-04-2016 SCD_RS14150 ed50d80119150b96ad5e4cbfaf9af9d7 364 PANTHER PTHR30160:SF1 6 363 4.5E-75 T 22-04-2016 SCD_RS14150 ed50d80119150b96ad5e4cbfaf9af9d7 364 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 13 357 7.8E-91 T 22-04-2016 IPR011916 Lipopolysaccharide heptosyltransferase III, putative KEGG: 00231+2.-.-.-|UniPathway: UPA00958 SCD_RS14150 ed50d80119150b96ad5e4cbfaf9af9d7 364 PANTHER PTHR30160 6 363 4.5E-75 T 22-04-2016 SCD_RS14150 ed50d80119150b96ad5e4cbfaf9af9d7 364 Gene3D G3DSA:3.40.50.2000 13 165 3.4E-34 T 22-04-2016 SCD_RS14150 ed50d80119150b96ad5e4cbfaf9af9d7 364 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 85 332 6.1E-46 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 Gene3D G3DSA:1.25.40.10 465 706 1.4E-29 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 SUPERFAMILY SSF48452 152 250 1.52E-35 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 SUPERFAMILY SSF48452 42 173 5.15E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 SMART SM00028 561 594 0.12 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 SMART SM00028 76 109 110.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 SMART SM00028 213 246 3.9E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 SMART SM00028 323 356 1.7 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 SMART SM00028 832 864 94.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 SMART SM00028 899 932 12.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 SMART SM00028 42 75 38.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 SMART SM00028 493 526 56.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 SMART SM00028 731 764 0.0058 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 SMART SM00028 865 898 340.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 SMART SM00028 179 212 350.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 SMART SM00028 391 424 6.5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 SMART SM00028 144 177 330.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 SMART SM00028 425 458 260.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 Gene3D G3DSA:1.25.40.10 38 173 1.0E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 Gene3D G3DSA:1.25.40.10 707 930 4.3E-34 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 Gene3D G3DSA:1.25.40.10 185 461 7.3E-39 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 SUPERFAMILY SSF48452 775 932 1.64E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 Pfam PF13429 Tetratricopeptide repeat 591 848 5.0E-7 T 22-04-2016 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 Pfam PF07721 Tetratricopeptide repeat 145 169 0.052 T 22-04-2016 IPR011717 Tetratricopeptide TPR-4 GO:0042802 UniPathway: UPA00694 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 SUPERFAMILY SSF48452 574 764 1.04E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 Pfam PF14559 Tetratricopeptide repeat 336 398 6.5E-7 T 22-04-2016 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 Pfam PF14559 Tetratricopeptide repeat 437 499 4.1E-6 T 22-04-2016 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 Pfam PF13432 Tetratricopeptide repeat 533 586 0.0017 T 22-04-2016 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 PANTHER PTHR23083 795 926 5.0E-60 T 22-04-2016 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 PANTHER PTHR23083 456 502 5.0E-60 T 22-04-2016 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 PANTHER PTHR23083 707 761 5.0E-60 T 22-04-2016 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 PANTHER PTHR23083 322 421 5.0E-60 T 22-04-2016 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 PANTHER PTHR23083 45 106 5.0E-60 T 22-04-2016 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 PANTHER PTHR23083 178 246 5.0E-60 T 22-04-2016 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 TIGRFAM TIGR02917 PEP_TPR_lipo: putative PEP-CTERM system TPR-repeat lipoprotein 18 926 6.4E-184 T 22-04-2016 IPR014266 PEP-CTERM system TPR-repeat lipoprotein, putative SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 SUPERFAMILY SSF48452 327 606 1.52E-35 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 850 923 3.6E-7 T 22-04-2016 SCD_RS09820 a4086c1a375eb5b541657d19f69febc3 951 Pfam PF13181 Tetratricopeptide repeat 213 245 0.077 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS02965 d148030fcaf5db9fb5ea16474330c8a3 251 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 2 206 2.8E-68 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SCD_RS02965 d148030fcaf5db9fb5ea16474330c8a3 251 PANTHER PTHR30371:SF0 1 239 4.0E-95 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SCD_RS02965 d148030fcaf5db9fb5ea16474330c8a3 251 PANTHER PTHR30371 1 239 4.0E-95 T 22-04-2016 SCD_RS02965 d148030fcaf5db9fb5ea16474330c8a3 251 ProSitePatterns PS01218 TatC family signature. 134 153 - T 22-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site SCD_RS02965 d148030fcaf5db9fb5ea16474330c8a3 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 65 83 1.9E-36 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SCD_RS02965 d148030fcaf5db9fb5ea16474330c8a3 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 134 162 1.9E-36 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SCD_RS02965 d148030fcaf5db9fb5ea16474330c8a3 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 83 109 1.9E-36 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SCD_RS02965 d148030fcaf5db9fb5ea16474330c8a3 251 Pfam PF00902 Sec-independent protein translocase protein (TatC) 1 201 9.6E-61 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SCD_RS02965 d148030fcaf5db9fb5ea16474330c8a3 251 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 1 220 16.894 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SCD_RS01750 69bd143a66bcd24a8c73904960cab0c3 282 Gene3D G3DSA:3.30.70.20 226 270 2.3E-8 T 22-04-2016 SCD_RS01750 69bd143a66bcd24a8c73904960cab0c3 282 Gene3D G3DSA:1.10.1060.10 54 78 4.0E-7 T 22-04-2016 SCD_RS01750 69bd143a66bcd24a8c73904960cab0c3 282 Gene3D G3DSA:1.10.1060.10 171 225 4.0E-7 T 22-04-2016 SCD_RS01750 69bd143a66bcd24a8c73904960cab0c3 282 PANTHER PTHR30176:SF3 157 178 5.4E-17 T 22-04-2016 SCD_RS01750 69bd143a66bcd24a8c73904960cab0c3 282 SUPERFAMILY SSF54862 68 132 1.16E-11 T 22-04-2016 SCD_RS01750 69bd143a66bcd24a8c73904960cab0c3 282 PANTHER PTHR30176 157 178 5.4E-17 T 22-04-2016 SCD_RS01750 69bd143a66bcd24a8c73904960cab0c3 282 Gene3D G3DSA:3.30.70.20 79 130 3.7E-10 T 22-04-2016 SCD_RS01750 69bd143a66bcd24a8c73904960cab0c3 282 PANTHER PTHR30176 220 272 5.4E-17 T 22-04-2016 SCD_RS01750 69bd143a66bcd24a8c73904960cab0c3 282 PANTHER PTHR30176 21 130 5.4E-17 T 22-04-2016 SCD_RS01750 69bd143a66bcd24a8c73904960cab0c3 282 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 255 266 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS01750 69bd143a66bcd24a8c73904960cab0c3 282 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 70 81 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS01750 69bd143a66bcd24a8c73904960cab0c3 282 PANTHER PTHR30176:SF3 21 130 5.4E-17 T 22-04-2016 SCD_RS01750 69bd143a66bcd24a8c73904960cab0c3 282 SUPERFAMILY SSF54862 219 273 8.66E-10 T 22-04-2016 SCD_RS01750 69bd143a66bcd24a8c73904960cab0c3 282 Pfam PF12838 4Fe-4S dicluster domain 220 268 6.2E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS01750 69bd143a66bcd24a8c73904960cab0c3 282 Pfam PF12838 4Fe-4S dicluster domain 69 124 4.1E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS01750 69bd143a66bcd24a8c73904960cab0c3 282 PANTHER PTHR30176:SF3 220 272 5.4E-17 T 22-04-2016 SCD_RS10385 72225a3e45e2d1f602884cc44f0376b6 325 Pfam PF01699 Sodium/calcium exchanger protein 187 323 8.1E-12 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 SCD_RS10385 72225a3e45e2d1f602884cc44f0376b6 325 Pfam PF01699 Sodium/calcium exchanger protein 1 151 1.4E-15 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 SCD_RS15900 0144863e51bc7456cf972ec10fa187f7 1016 PANTHER PTHR32093 1010 1016 1.8E-24 T 22-04-2016 SCD_RS15900 0144863e51bc7456cf972ec10fa187f7 1016 PANTHER PTHR32093 128 669 1.8E-24 T 22-04-2016 SCD_RS00310 643cab4d12747d6249a10265ac3867c6 205 Gene3D G3DSA:3.90.950.10 5 203 1.7E-64 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SCD_RS00310 643cab4d12747d6249a10265ac3867c6 205 TIGRFAM TIGR00172 maf: septum formation protein Maf 5 197 2.8E-47 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 SCD_RS00310 643cab4d12747d6249a10265ac3867c6 205 SUPERFAMILY SSF52972 5 198 9.81E-57 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SCD_RS00310 643cab4d12747d6249a10265ac3867c6 205 PIRSF PIRSF006305 1 205 1.2E-48 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 SCD_RS00310 643cab4d12747d6249a10265ac3867c6 205 Pfam PF02545 Maf-like protein 6 198 1.4E-51 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 SCD_RS00310 643cab4d12747d6249a10265ac3867c6 205 Hamap MF_00528 Septum formation protein Maf [maf]. 6 204 31.894 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 SCD_RS10800 49800160180c25eccc9d48c4ace77810 87 PANTHER PTHR33398 1 87 1.5E-30 T 22-04-2016 SCD_RS10800 49800160180c25eccc9d48c4ace77810 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 83 6.0E-23 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS10800 49800160180c25eccc9d48c4ace77810 87 Gene3D G3DSA:1.20.58.110 1 86 4.1E-29 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS10800 49800160180c25eccc9d48c4ace77810 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 1.2E-24 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS10800 49800160180c25eccc9d48c4ace77810 87 Pfam PF01649 Ribosomal protein S20 2 84 6.4E-26 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS10800 49800160180c25eccc9d48c4ace77810 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.817 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS10800 49800160180c25eccc9d48c4ace77810 87 SUPERFAMILY SSF46992 3 86 4.45E-28 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS00510 d09e585b617577d1b5a5de503e34ed34 379 PANTHER PTHR21581:SF3 1 379 1.7E-109 T 22-04-2016 SCD_RS00510 d09e585b617577d1b5a5de503e34ed34 379 Gene3D G3DSA:2.60.410.10 274 362 9.3E-27 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SCD_RS00510 d09e585b617577d1b5a5de503e34ed34 379 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 273 362 2.4E-23 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SCD_RS00510 d09e585b617577d1b5a5de503e34ed34 379 Gene3D G3DSA:3.40.710.10 26 273 2.6E-96 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS00510 d09e585b617577d1b5a5de503e34ed34 379 SUPERFAMILY SSF56601 1 273 3.89E-83 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS00510 d09e585b617577d1b5a5de503e34ed34 379 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 60 71 6.6E-18 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SCD_RS00510 d09e585b617577d1b5a5de503e34ed34 379 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 113 130 6.6E-18 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SCD_RS00510 d09e585b617577d1b5a5de503e34ed34 379 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 140 153 6.6E-18 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SCD_RS00510 d09e585b617577d1b5a5de503e34ed34 379 PANTHER PTHR21581 1 379 1.7E-109 T 22-04-2016 SCD_RS00510 d09e585b617577d1b5a5de503e34ed34 379 SMART SM00936 273 363 1.2E-33 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SCD_RS00510 d09e585b617577d1b5a5de503e34ed34 379 SUPERFAMILY SSF69189 273 365 4.9E-25 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SCD_RS00510 d09e585b617577d1b5a5de503e34ed34 379 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 29 252 3.0E-74 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 SCD_RS09420 0b7f6547293847847f4270185aaf7663 440 PANTHER PTHR30404:SF0 194 440 5.7E-102 T 22-04-2016 SCD_RS09420 0b7f6547293847847f4270185aaf7663 440 PANTHER PTHR30404:SF0 1 178 5.7E-102 T 22-04-2016 SCD_RS09420 0b7f6547293847847f4270185aaf7663 440 Gene3D G3DSA:3.40.630.40 205 302 3.0E-56 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SCD_RS09420 0b7f6547293847847f4270185aaf7663 440 Gene3D G3DSA:3.40.630.40 350 425 3.0E-56 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SCD_RS09420 0b7f6547293847847f4270185aaf7663 440 PANTHER PTHR30404 194 440 5.7E-102 T 22-04-2016 SCD_RS09420 0b7f6547293847847f4270185aaf7663 440 PANTHER PTHR30404 1 178 5.7E-102 T 22-04-2016 SCD_RS09420 0b7f6547293847847f4270185aaf7663 440 SUPERFAMILY SSF53187 349 425 1.44E-51 T 22-04-2016 SCD_RS09420 0b7f6547293847847f4270185aaf7663 440 SUPERFAMILY SSF53187 205 301 1.44E-51 T 22-04-2016 SCD_RS09420 0b7f6547293847847f4270185aaf7663 440 Pfam PF11741 AMIN domain 29 131 1.8E-25 T 22-04-2016 IPR021731 AMIN domain SCD_RS09420 0b7f6547293847847f4270185aaf7663 440 SMART SM00646 267 422 1.4E-63 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SCD_RS09420 0b7f6547293847847f4270185aaf7663 440 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 207 422 1.3E-45 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SCD_RS00710 59aaa52f25f5183d673f2b66f54ee470 116 Pfam PF02635 DsrE/DsrF-like family 1 116 1.3E-23 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein SCD_RS00710 59aaa52f25f5183d673f2b66f54ee470 116 PANTHER PTHR34874 1 116 5.2E-25 T 22-04-2016 SCD_RS00710 59aaa52f25f5183d673f2b66f54ee470 116 SUPERFAMILY SSF75169 1 116 1.7E-26 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS00710 59aaa52f25f5183d673f2b66f54ee470 116 Gene3D G3DSA:3.40.1260.10 1 116 2.3E-32 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS12290 bfab5dd8d41aa41edb187be67d285953 387 Pfam PF01098 Cell cycle protein 19 379 6.0E-103 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SCD_RS12290 bfab5dd8d41aa41edb187be67d285953 387 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 15 386 40.083 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 SCD_RS12290 bfab5dd8d41aa41edb187be67d285953 387 PANTHER PTHR30474 13 380 3.8E-142 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SCD_RS12290 bfab5dd8d41aa41edb187be67d285953 387 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 17 377 3.9E-127 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 SCD_RS12290 bfab5dd8d41aa41edb187be67d285953 387 PANTHER PTHR30474:SF2 13 380 3.8E-142 T 22-04-2016 SCD_RS08060 fba296a2bd2b3b6c504579230cbdb867 452 SUPERFAMILY SSF50156 86 177 1.31E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS08060 fba296a2bd2b3b6c504579230cbdb867 452 Gene3D G3DSA:2.30.42.10 93 184 9.1E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS08060 fba296a2bd2b3b6c504579230cbdb867 452 SUPERFAMILY SSF50156 199 290 4.73E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS08060 fba296a2bd2b3b6c504579230cbdb867 452 PANTHER PTHR22939:SF78 174 451 2.6E-77 T 22-04-2016 SCD_RS08060 fba296a2bd2b3b6c504579230cbdb867 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 1 450 1.1E-114 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 SCD_RS08060 fba296a2bd2b3b6c504579230cbdb867 452 Gene3D G3DSA:2.30.42.10 196 292 1.5E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS08060 fba296a2bd2b3b6c504579230cbdb867 452 Pfam PF02163 Peptidase family M50 6 437 2.8E-78 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 SCD_RS08060 fba296a2bd2b3b6c504579230cbdb867 452 SMART SM00228 113 182 7.2 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS08060 fba296a2bd2b3b6c504579230cbdb867 452 SMART SM00228 208 277 8.1E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS08060 fba296a2bd2b3b6c504579230cbdb867 452 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 218 273 3.2E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS08060 fba296a2bd2b3b6c504579230cbdb867 452 PANTHER PTHR22939 174 451 2.6E-77 T 22-04-2016 SCD_RS00055 b82596139b2f1819952536fd2825a269 309 Pfam PF02911 Formyl transferase, C-terminal domain 203 298 6.7E-24 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS00055 b82596139b2f1819952536fd2825a269 309 PANTHER PTHR11138 1 296 2.4E-110 T 22-04-2016 SCD_RS00055 b82596139b2f1819952536fd2825a269 309 Gene3D G3DSA:3.40.50.170 1 204 5.9E-76 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS00055 b82596139b2f1819952536fd2825a269 309 Pfam PF00551 Formyl transferase 2 179 4.7E-45 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS00055 b82596139b2f1819952536fd2825a269 309 SUPERFAMILY SSF53328 1 206 2.35E-67 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS00055 b82596139b2f1819952536fd2825a269 309 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 302 36.274 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS00055 b82596139b2f1819952536fd2825a269 309 SUPERFAMILY SSF50486 204 307 8.04E-28 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 SCD_RS00055 b82596139b2f1819952536fd2825a269 309 Gene3D G3DSA:3.10.25.10 206 308 5.8E-31 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS00055 b82596139b2f1819952536fd2825a269 309 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 299 1.2E-92 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS05395 6586ca03562697040b40561f1340deb1 317 Pfam PF00140 Sigma-70 factor, region 1.2 45 77 1.8E-13 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05395 6586ca03562697040b40561f1340deb1 317 SUPERFAMILY SSF88659 214 309 1.36E-21 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05395 6586ca03562697040b40561f1340deb1 317 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 3 317 37.031 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05395 6586ca03562697040b40561f1340deb1 317 Gene3D G3DSA:1.10.10.10 248 311 5.3E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS05395 6586ca03562697040b40561f1340deb1 317 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 39 316 4.8E-129 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05395 6586ca03562697040b40561f1340deb1 317 PANTHER PTHR30603:SF15 45 315 1.0E-121 T 22-04-2016 SCD_RS05395 6586ca03562697040b40561f1340deb1 317 Pfam PF04545 Sigma-70, region 4 251 304 1.9E-12 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05395 6586ca03562697040b40561f1340deb1 317 Pfam PF04539 Sigma-70 region 3 166 233 7.6E-11 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05395 6586ca03562697040b40561f1340deb1 317 SUPERFAMILY SSF88659 156 230 1.13E-10 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05395 6586ca03562697040b40561f1340deb1 317 Gene3D G3DSA:1.10.10.10 156 205 7.7E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS05395 6586ca03562697040b40561f1340deb1 317 PRINTS PR00046 Major sigma-70 factor signature 291 302 8.0E-21 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05395 6586ca03562697040b40561f1340deb1 317 PRINTS PR00046 Major sigma-70 factor signature 131 139 8.0E-21 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05395 6586ca03562697040b40561f1340deb1 317 PRINTS PR00046 Major sigma-70 factor signature 276 291 8.0E-21 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05395 6586ca03562697040b40561f1340deb1 317 PRINTS PR00046 Major sigma-70 factor signature 107 120 8.0E-21 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05395 6586ca03562697040b40561f1340deb1 317 PRINTS PR00046 Major sigma-70 factor signature 255 267 8.0E-21 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05395 6586ca03562697040b40561f1340deb1 317 SUPERFAMILY SSF88946 45 153 4.97E-46 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05395 6586ca03562697040b40561f1340deb1 317 Pfam PF04542 Sigma-70 region 2 83 152 5.7E-19 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05395 6586ca03562697040b40561f1340deb1 317 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 107 120 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05395 6586ca03562697040b40561f1340deb1 317 Gene3D G3DSA:1.10.601.10 44 152 2.0E-57 T 22-04-2016 SCD_RS05395 6586ca03562697040b40561f1340deb1 317 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 79 305 1.7E-32 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS05395 6586ca03562697040b40561f1340deb1 317 PANTHER PTHR30603 45 315 1.0E-121 T 22-04-2016 SCD_RS02865 38c10c59ffc6f0acd9a457502b2e2124 169 Pfam PF02470 MlaD protein 39 116 1.2E-19 T 22-04-2016 IPR003399 Mce/MlaD SCD_RS02865 38c10c59ffc6f0acd9a457502b2e2124 169 PANTHER PTHR33371 1 146 1.5E-36 T 22-04-2016 SCD_RS02865 38c10c59ffc6f0acd9a457502b2e2124 169 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 147 3.0E-56 T 22-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 SCD_RS00635 955df8467d1127a12d8bbd1a49c64047 323 Pfam PF13280 WYL domain 144 319 3.8E-34 T 22-04-2016 IPR026881 WYL domain SCD_RS00635 955df8467d1127a12d8bbd1a49c64047 323 PANTHER PTHR34580 1 323 8.5E-67 T 22-04-2016 SCD_RS00635 955df8467d1127a12d8bbd1a49c64047 323 Gene3D G3DSA:1.10.10.10 2 64 3.1E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS00635 955df8467d1127a12d8bbd1a49c64047 323 PANTHER PTHR34580:SF3 1 323 8.5E-67 T 22-04-2016 SCD_RS00635 955df8467d1127a12d8bbd1a49c64047 323 Pfam PF08220 DeoR-like helix-turn-helix domain 6 45 5.2E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SCD_RS00635 955df8467d1127a12d8bbd1a49c64047 323 SUPERFAMILY SSF46785 3 47 4.08E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS13040 cd463ff757d2e61e712c214ef276eaa6 438 PANTHER PTHR11851 31 437 4.5E-68 T 22-04-2016 SCD_RS13040 cd463ff757d2e61e712c214ef276eaa6 438 Gene3D G3DSA:3.30.830.10 259 433 5.0E-31 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SCD_RS13040 cd463ff757d2e61e712c214ef276eaa6 438 Gene3D G3DSA:3.30.830.10 26 237 2.2E-38 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SCD_RS13040 cd463ff757d2e61e712c214ef276eaa6 438 SUPERFAMILY SSF63411 23 230 4.17E-43 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SCD_RS13040 cd463ff757d2e61e712c214ef276eaa6 438 Pfam PF00675 Insulinase (Peptidase family M16) 38 171 2.7E-6 T 22-04-2016 IPR011765 Peptidase M16, N-terminal SCD_RS13040 cd463ff757d2e61e712c214ef276eaa6 438 PANTHER PTHR11851:SF140 31 437 4.5E-68 T 22-04-2016 SCD_RS13040 cd463ff757d2e61e712c214ef276eaa6 438 Pfam PF05193 Peptidase M16 inactive domain 192 367 8.4E-33 T 22-04-2016 IPR007863 Peptidase M16, C-terminal SCD_RS13040 cd463ff757d2e61e712c214ef276eaa6 438 SUPERFAMILY SSF63411 254 434 2.33E-44 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SCD_RS13380 adbbad82d1ff85b382fc883dbc6778ee 94 SUPERFAMILY SSF89360 1 94 3.53E-17 T 22-04-2016 IPR000361 FeS cluster biogenesis SCD_RS13380 adbbad82d1ff85b382fc883dbc6778ee 94 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 88 2.3E-9 T 22-04-2016 IPR000361 FeS cluster biogenesis SCD_RS13380 adbbad82d1ff85b382fc883dbc6778ee 94 Gene3D G3DSA:2.60.300.12 1 93 6.8E-17 T 22-04-2016 IPR000361 FeS cluster biogenesis SCD_RS10845 01ef7eb44e8b7736aeeb4967c9ea76be 288 Pfam PF00085 Thioredoxin 10 111 1.7E-17 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 SCD_RS10845 01ef7eb44e8b7736aeeb4967c9ea76be 288 Gene3D G3DSA:1.25.40.10 202 287 3.7E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS10845 01ef7eb44e8b7736aeeb4967c9ea76be 288 Gene3D G3DSA:3.40.30.10 3 112 9.0E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS10845 01ef7eb44e8b7736aeeb4967c9ea76be 288 Pfam PF14559 Tetratricopeptide repeat 128 191 4.1E-9 T 22-04-2016 SCD_RS10845 01ef7eb44e8b7736aeeb4967c9ea76be 288 SUPERFAMILY SSF48452 126 253 2.86E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS10845 01ef7eb44e8b7736aeeb4967c9ea76be 288 Gene3D G3DSA:1.25.40.10 127 191 6.9E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS10845 01ef7eb44e8b7736aeeb4967c9ea76be 288 SUPERFAMILY SSF52833 10 114 1.46E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS10845 01ef7eb44e8b7736aeeb4967c9ea76be 288 PANTHER PTHR10438 259 280 1.4E-25 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SCD_RS10845 01ef7eb44e8b7736aeeb4967c9ea76be 288 PANTHER PTHR10438 11 115 1.4E-25 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SCD_RS10845 01ef7eb44e8b7736aeeb4967c9ea76be 288 Pfam PF14561 Tetratricopeptide repeat 200 287 5.0E-22 T 22-04-2016 SCD_RS10845 01ef7eb44e8b7736aeeb4967c9ea76be 288 PANTHER PTHR10438:SF255 259 280 1.4E-25 T 22-04-2016 SCD_RS10845 01ef7eb44e8b7736aeeb4967c9ea76be 288 PANTHER PTHR10438:SF255 11 115 1.4E-25 T 22-04-2016 SCD_RS01400 1437d7200225205dae37c5c902258d47 231 Gene3D G3DSA:3.40.50.2300 3 126 1.1E-42 T 22-04-2016 SCD_RS01400 1437d7200225205dae37c5c902258d47 231 SMART SM00862 150 225 2.3E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SCD_RS01400 1437d7200225205dae37c5c902258d47 231 PANTHER PTHR26402 3 227 8.7E-118 T 22-04-2016 SCD_RS01400 1437d7200225205dae37c5c902258d47 231 SUPERFAMILY SSF46894 123 226 2.49E-31 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SCD_RS01400 1437d7200225205dae37c5c902258d47 231 Pfam PF00072 Response regulator receiver domain 5 116 5.5E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS01400 1437d7200225205dae37c5c902258d47 231 SMART SM00448 3 116 3.3E-44 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS01400 1437d7200225205dae37c5c902258d47 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.3E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SCD_RS01400 1437d7200225205dae37c5c902258d47 231 PANTHER PTHR26402:SF576 3 227 8.7E-118 T 22-04-2016 SCD_RS01400 1437d7200225205dae37c5c902258d47 231 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 1.0E-107 T 22-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 SCD_RS01400 1437d7200225205dae37c5c902258d47 231 SUPERFAMILY SSF52172 3 126 3.98E-44 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS01400 1437d7200225205dae37c5c902258d47 231 Gene3D G3DSA:1.10.10.10 128 227 5.2E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS02520 3d559fe68cd303c9c96730cbe24f3b99 686 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 657 4.8E-222 T 22-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 SCD_RS02520 3d559fe68cd303c9c96730cbe24f3b99 686 Gene3D G3DSA:3.40.50.300 448 630 4.6E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02520 3d559fe68cd303c9c96730cbe24f3b99 686 Pfam PF00271 Helicase conserved C-terminal domain 474 581 8.8E-18 T 22-04-2016 IPR001650 Helicase, C-terminal SCD_RS02520 3d559fe68cd303c9c96730cbe24f3b99 686 SMART SM00487 263 453 1.8E-30 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SCD_RS02520 3d559fe68cd303c9c96730cbe24f3b99 686 Gene3D G3DSA:2.40.50.140 49 141 5.4E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS02520 3d559fe68cd303c9c96730cbe24f3b99 686 PANTHER PTHR24031 219 239 9.5E-125 T 22-04-2016 SCD_RS02520 3d559fe68cd303c9c96730cbe24f3b99 686 PANTHER PTHR24031 619 676 9.5E-125 T 22-04-2016 SCD_RS02520 3d559fe68cd303c9c96730cbe24f3b99 686 PANTHER PTHR24031 297 596 9.5E-125 T 22-04-2016 SCD_RS02520 3d559fe68cd303c9c96730cbe24f3b99 686 PANTHER PTHR24031 267 280 9.5E-125 T 22-04-2016 SCD_RS02520 3d559fe68cd303c9c96730cbe24f3b99 686 SUPERFAMILY SSF52540 288 340 1.85E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02520 3d559fe68cd303c9c96730cbe24f3b99 686 SUPERFAMILY SSF52540 501 644 1.85E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02520 3d559fe68cd303c9c96730cbe24f3b99 686 Gene3D G3DSA:3.40.50.300 251 447 4.0E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02520 3d559fe68cd303c9c96730cbe24f3b99 686 SMART SM00490 498 582 9.6E-19 T 22-04-2016 IPR001650 Helicase, C-terminal SCD_RS02520 3d559fe68cd303c9c96730cbe24f3b99 686 Pfam PF00270 DEAD/DEAH box helicase 269 427 7.2E-17 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SCD_RS02520 3d559fe68cd303c9c96730cbe24f3b99 686 PANTHER PTHR24031:SF249 219 239 9.5E-125 T 22-04-2016 SCD_RS02520 3d559fe68cd303c9c96730cbe24f3b99 686 PANTHER PTHR24031:SF249 619 676 9.5E-125 T 22-04-2016 SCD_RS02520 3d559fe68cd303c9c96730cbe24f3b99 686 PANTHER PTHR24031:SF249 297 596 9.5E-125 T 22-04-2016 SCD_RS02520 3d559fe68cd303c9c96730cbe24f3b99 686 PANTHER PTHR24031:SF249 267 280 9.5E-125 T 22-04-2016 SCD_RS02520 3d559fe68cd303c9c96730cbe24f3b99 686 SUPERFAMILY SSF52540 177 447 1.5E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02520 3d559fe68cd303c9c96730cbe24f3b99 686 Pfam PF17191 RecG wedge domain 23 170 1.0E-14 T 22-04-2016 IPR033454 RecG, wedge domain SCD_RS02520 3d559fe68cd303c9c96730cbe24f3b99 686 SUPERFAMILY SSF50249 20 171 1.48E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS13145 d5ca5eed45eae9837818361db5402dc3 281 PANTHER PTHR11403 1 116 2.1E-91 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 SCD_RS13145 d5ca5eed45eae9837818361db5402dc3 281 PANTHER PTHR11403 134 281 2.1E-91 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 SCD_RS13145 d5ca5eed45eae9837818361db5402dc3 281 Gene3D G3DSA:1.10.287.70 5 69 6.6E-14 T 22-04-2016 SCD_RS13145 d5ca5eed45eae9837818361db5402dc3 281 Pfam PF00510 Cytochrome c oxidase subunit III 8 280 7.3E-57 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 SCD_RS13145 d5ca5eed45eae9837818361db5402dc3 281 PANTHER PTHR11403:SF0 1 116 2.1E-91 T 22-04-2016 SCD_RS13145 d5ca5eed45eae9837818361db5402dc3 281 PANTHER PTHR11403:SF0 134 281 2.1E-91 T 22-04-2016 SCD_RS13145 d5ca5eed45eae9837818361db5402dc3 281 Gene3D G3DSA:1.20.120.80 76 281 5.1E-65 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 SCD_RS13145 d5ca5eed45eae9837818361db5402dc3 281 SUPERFAMILY SSF81452 5 281 4.5E-79 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 SCD_RS07820 60038937c2b829a6ccad06c0dfbc2542 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 166 339 2.4E-24 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SCD_RS07820 60038937c2b829a6ccad06c0dfbc2542 345 PANTHER PTHR10256 2 335 7.3E-120 T 22-04-2016 SCD_RS07820 60038937c2b829a6ccad06c0dfbc2542 345 Gene3D G3DSA:3.30.1330.10 30 159 5.5E-32 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SCD_RS07820 60038937c2b829a6ccad06c0dfbc2542 345 Gene3D G3DSA:3.90.650.10 175 341 1.5E-16 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SCD_RS07820 60038937c2b829a6ccad06c0dfbc2542 345 SUPERFAMILY SSF55326 5 158 8.37E-42 T 22-04-2016 SCD_RS07820 60038937c2b829a6ccad06c0dfbc2542 345 SUPERFAMILY SSF56042 161 340 5.98E-45 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SCD_RS07820 60038937c2b829a6ccad06c0dfbc2542 345 Hamap MF_00625 Selenide, water dikinase [selD]. 2 345 43.338 T 22-04-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 SCD_RS07820 60038937c2b829a6ccad06c0dfbc2542 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 47 154 6.6E-20 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SCD_RS07820 60038937c2b829a6ccad06c0dfbc2542 345 TIGRFAM TIGR00476 selD: selenide, water dikinase 4 313 6.0E-130 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 SCD_RS07820 60038937c2b829a6ccad06c0dfbc2542 345 PIRSF PIRSF036407 1 344 1.9E-113 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 SCD_RS08805 82aac4894d69c10d1efe6e588cc4c351 428 Gene3D G3DSA:3.50.50.60 355 426 4.9E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS08805 82aac4894d69c10d1efe6e588cc4c351 428 Gene3D G3DSA:3.50.50.60 1 67 4.9E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS08805 82aac4894d69c10d1efe6e588cc4c351 428 Gene3D G3DSA:3.50.50.60 189 267 4.9E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS08805 82aac4894d69c10d1efe6e588cc4c351 428 Gene3D G3DSA:3.50.50.60 131 150 4.9E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS08805 82aac4894d69c10d1efe6e588cc4c351 428 SUPERFAMILY SSF51905 385 425 3.33E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS08805 82aac4894d69c10d1efe6e588cc4c351 428 SUPERFAMILY SSF51905 1 303 3.33E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS08805 82aac4894d69c10d1efe6e588cc4c351 428 PRINTS PR00419 Adrenodoxin reductase family signature 2 24 1.1E-5 T 22-04-2016 SCD_RS08805 82aac4894d69c10d1efe6e588cc4c351 428 PRINTS PR00419 Adrenodoxin reductase family signature 25 38 1.1E-5 T 22-04-2016 SCD_RS08805 82aac4894d69c10d1efe6e588cc4c351 428 Pfam PF01593 Flavin containing amine oxidoreductase 11 424 1.4E-39 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 SCD_RS08805 82aac4894d69c10d1efe6e588cc4c351 428 PANTHER PTHR10742 1 426 6.5E-46 T 22-04-2016 SCD_RS08805 82aac4894d69c10d1efe6e588cc4c351 428 TIGRFAM TIGR03467 HpnE: squalene-associated FAD-dependent desaturase 3 424 1.9E-142 T 22-04-2016 IPR017830 Squalene-associated FAD-dependent desaturase SCD_RS13920 1b2541304ac95396ae98ff6327243027 670 PANTHER PTHR30332 182 642 1.6E-78 T 22-04-2016 SCD_RS13920 1b2541304ac95396ae98ff6327243027 670 SUPERFAMILY SSF48452 26 156 5.69E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS13920 1b2541304ac95396ae98ff6327243027 670 SMART SM00965 206 257 9.9E-6 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SCD_RS13920 1b2541304ac95396ae98ff6327243027 670 PRINTS PR01032 Gene IV protein signature 497 525 2.1E-8 T 22-04-2016 SCD_RS13920 1b2541304ac95396ae98ff6327243027 670 PRINTS PR01032 Gene IV protein signature 427 450 2.1E-8 T 22-04-2016 SCD_RS13920 1b2541304ac95396ae98ff6327243027 670 PRINTS PR01032 Gene IV protein signature 550 572 2.1E-8 T 22-04-2016 SCD_RS13920 1b2541304ac95396ae98ff6327243027 670 Pfam PF07660 Secretin and TonB N terminus short domain 206 256 7.3E-8 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SCD_RS13920 1b2541304ac95396ae98ff6327243027 670 Gene3D G3DSA:1.25.40.10 29 153 4.1E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS13920 1b2541304ac95396ae98ff6327243027 670 Pfam PF00263 Bacterial type II and III secretion system protein 409 570 7.1E-46 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 SCD_RS13920 1b2541304ac95396ae98ff6327243027 670 PRINTS PR00811 Bacterial general secretion pathway protein D signature 557 571 8.1E-15 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS13920 1b2541304ac95396ae98ff6327243027 670 PRINTS PR00811 Bacterial general secretion pathway protein D signature 330 340 8.1E-15 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS13920 1b2541304ac95396ae98ff6327243027 670 PRINTS PR00811 Bacterial general secretion pathway protein D signature 437 447 8.1E-15 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS13920 1b2541304ac95396ae98ff6327243027 670 PRINTS PR00811 Bacterial general secretion pathway protein D signature 402 426 8.1E-15 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS13920 1b2541304ac95396ae98ff6327243027 670 PRINTS PR00811 Bacterial general secretion pathway protein D signature 534 552 8.1E-15 T 22-04-2016 IPR001775 GspD/PilQ family SCD_RS13920 1b2541304ac95396ae98ff6327243027 670 PANTHER PTHR30332:SF7 182 642 1.6E-78 T 22-04-2016 SCD_RS06295 84e0fcd60583024c6de669f858eb4e6e 164 Gene3D G3DSA:1.20.58.300 12 137 1.1E-23 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 SCD_RS06295 84e0fcd60583024c6de669f858eb4e6e 164 Pfam PF05130 FlgN protein 12 153 9.4E-30 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 SCD_RS06295 84e0fcd60583024c6de669f858eb4e6e 164 SUPERFAMILY SSF140566 11 137 8.37E-24 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 SCD_RS06050 d4978a490e421a43747ef6ad107b14b7 129 SUPERFAMILY SSF52172 4 125 3.98E-35 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS06050 d4978a490e421a43747ef6ad107b14b7 129 PANTHER PTHR26402 6 126 4.9E-41 T 22-04-2016 SCD_RS06050 d4978a490e421a43747ef6ad107b14b7 129 SMART SM00448 6 120 5.2E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS06050 d4978a490e421a43747ef6ad107b14b7 129 Gene3D G3DSA:3.40.50.2300 4 126 9.7E-38 T 22-04-2016 SCD_RS06050 d4978a490e421a43747ef6ad107b14b7 129 Pfam PF00072 Response regulator receiver domain 9 120 3.4E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS06390 36b6290aa1762872d7e3ffa66eb3a7cb 331 Pfam PF02685 Glucokinase 10 327 1.8E-107 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 SCD_RS06390 36b6290aa1762872d7e3ffa66eb3a7cb 331 TIGRFAM TIGR00749 glk: glucokinase 10 323 7.3E-90 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 SCD_RS06390 36b6290aa1762872d7e3ffa66eb3a7cb 331 PANTHER PTHR30514:SF0 3 331 2.6E-83 T 22-04-2016 SCD_RS06390 36b6290aa1762872d7e3ffa66eb3a7cb 331 SUPERFAMILY SSF53067 9 328 3.08E-57 T 22-04-2016 SCD_RS06390 36b6290aa1762872d7e3ffa66eb3a7cb 331 Gene3D G3DSA:3.40.367.20 104 312 3.3E-72 T 22-04-2016 SCD_RS06390 36b6290aa1762872d7e3ffa66eb3a7cb 331 Gene3D G3DSA:3.30.420.40 7 78 2.6E-5 T 22-04-2016 SCD_RS06390 36b6290aa1762872d7e3ffa66eb3a7cb 331 PANTHER PTHR30514 3 331 2.6E-83 T 22-04-2016 SCD_RS03390 50a6d0e9c762b4b438111c35c1964f6a 719 Gene3D G3DSA:3.40.1190.10 481 717 2.4E-21 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS03390 50a6d0e9c762b4b438111c35c1964f6a 719 Pfam PF08245 Mur ligase middle domain 487 639 4.7E-7 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS03390 50a6d0e9c762b4b438111c35c1964f6a 719 PANTHER PTHR23135 387 717 6.3E-53 T 22-04-2016 SCD_RS03390 50a6d0e9c762b4b438111c35c1964f6a 719 SUPERFAMILY SSF53623 482 716 7.63E-21 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS03390 50a6d0e9c762b4b438111c35c1964f6a 719 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 6 719 5.0E-298 T 22-04-2016 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 SCD_RS03390 50a6d0e9c762b4b438111c35c1964f6a 719 SMART SM01209 217 342 0.0038 T 22-04-2016 SCD_RS03390 50a6d0e9c762b4b438111c35c1964f6a 719 SUPERFAMILY SSF56059 218 492 2.12E-34 T 22-04-2016 SCD_RS03390 50a6d0e9c762b4b438111c35c1964f6a 719 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 218 304 4.0E-9 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SCD_RS03390 50a6d0e9c762b4b438111c35c1964f6a 719 PANTHER PTHR23135:SF18 387 717 6.3E-53 T 22-04-2016 SCD_RS03390 50a6d0e9c762b4b438111c35c1964f6a 719 Gene3D G3DSA:3.30.470.20 317 359 3.8E-5 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SCD_RS03390 50a6d0e9c762b4b438111c35c1964f6a 719 Gene3D G3DSA:3.30.470.20 393 454 3.8E-5 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SCD_RS03390 50a6d0e9c762b4b438111c35c1964f6a 719 Gene3D G3DSA:3.30.470.20 209 231 3.8E-5 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SCD_RS03390 50a6d0e9c762b4b438111c35c1964f6a 719 Gene3D G3DSA:3.30.1490.20 232 301 3.7E-20 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SCD_RS03925 01938e46928eb1078e2a9cc87b86010e 422 PANTHER PTHR10632:SF7 1 416 2.7E-164 T 22-04-2016 SCD_RS03925 01938e46928eb1078e2a9cc87b86010e 422 SUPERFAMILY SSF51905 155 239 3.02E-7 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS03925 01938e46928eb1078e2a9cc87b86010e 422 Gene3D G3DSA:3.50.50.60 263 341 3.8E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS03925 01938e46928eb1078e2a9cc87b86010e 422 Gene3D G3DSA:3.50.50.60 2 117 3.8E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS03925 01938e46928eb1078e2a9cc87b86010e 422 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 306 5.2E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS03925 01938e46928eb1078e2a9cc87b86010e 422 SUPERFAMILY SSF51905 256 334 4.08E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS03925 01938e46928eb1078e2a9cc87b86010e 422 SUPERFAMILY SSF51905 3 109 4.08E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS03925 01938e46928eb1078e2a9cc87b86010e 422 PANTHER PTHR10632 1 416 2.7E-164 T 22-04-2016 SCD_RS11140 b3d4fd99cd116cb2d80c02aee420cf59 230 SMART SM00448 1 112 4.3E-42 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS11140 b3d4fd99cd116cb2d80c02aee420cf59 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 1.4E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SCD_RS11140 b3d4fd99cd116cb2d80c02aee420cf59 230 Gene3D G3DSA:3.40.50.2300 1 120 3.0E-39 T 22-04-2016 SCD_RS11140 b3d4fd99cd116cb2d80c02aee420cf59 230 SMART SM00862 146 221 5.5E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SCD_RS11140 b3d4fd99cd116cb2d80c02aee420cf59 230 PANTHER PTHR26402:SF575 1 222 1.0E-102 T 22-04-2016 SCD_RS11140 b3d4fd99cd116cb2d80c02aee420cf59 230 Pfam PF00072 Response regulator receiver domain 3 113 9.2E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS11140 b3d4fd99cd116cb2d80c02aee420cf59 230 SUPERFAMILY SSF52172 1 176 5.27E-40 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS11140 b3d4fd99cd116cb2d80c02aee420cf59 230 Gene3D G3DSA:1.10.10.10 124 224 5.3E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS11140 b3d4fd99cd116cb2d80c02aee420cf59 230 PANTHER PTHR26402 1 222 1.0E-102 T 22-04-2016 SCD_RS11140 b3d4fd99cd116cb2d80c02aee420cf59 230 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 1.7E-106 T 22-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 SCD_RS09230 63a84fcb96ba9ed8a1ade3b2e2ea1484 163 PANTHER PTHR22778 5 162 7.2E-43 T 22-04-2016 SCD_RS09230 63a84fcb96ba9ed8a1ade3b2e2ea1484 163 Gene3D G3DSA:3.40.430.10 4 162 6.4E-60 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain SCD_RS09230 63a84fcb96ba9ed8a1ade3b2e2ea1484 163 SUPERFAMILY SSF53597 5 162 3.79E-56 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain SCD_RS09230 63a84fcb96ba9ed8a1ade3b2e2ea1484 163 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 17 39 - T 22-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SCD_RS09230 63a84fcb96ba9ed8a1ade3b2e2ea1484 163 Pfam PF00186 Dihydrofolate reductase 6 161 3.2E-59 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SCD_RS09230 63a84fcb96ba9ed8a1ade3b2e2ea1484 163 PANTHER PTHR22778:SF16 5 162 7.2E-43 T 22-04-2016 SCD_RS09230 63a84fcb96ba9ed8a1ade3b2e2ea1484 163 PRINTS PR00070 Dihydrofolate reductase signature 95 109 1.8E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SCD_RS09230 63a84fcb96ba9ed8a1ade3b2e2ea1484 163 PRINTS PR00070 Dihydrofolate reductase signature 31 39 1.8E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SCD_RS09230 63a84fcb96ba9ed8a1ade3b2e2ea1484 163 PRINTS PR00070 Dihydrofolate reductase signature 17 27 1.8E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SCD_RS09230 63a84fcb96ba9ed8a1ade3b2e2ea1484 163 PRINTS PR00070 Dihydrofolate reductase signature 44 55 1.8E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SCD_RS09230 63a84fcb96ba9ed8a1ade3b2e2ea1484 163 PIRSF PIRSF000194 1 163 4.2E-61 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SCD_RS05995 c10594418dc136b79b892504aa4f72b3 243 PANTHER PTHR11938 50 180 2.8E-53 T 22-04-2016 SCD_RS05995 c10594418dc136b79b892504aa4f72b3 243 PANTHER PTHR11938 1 28 2.8E-53 T 22-04-2016 SCD_RS05995 c10594418dc136b79b892504aa4f72b3 243 Gene3D G3DSA:3.30.70.20 133 204 1.5E-15 T 22-04-2016 SCD_RS05995 c10594418dc136b79b892504aa4f72b3 243 Gene3D G3DSA:3.30.70.20 3 80 2.3E-18 T 22-04-2016 SCD_RS05995 c10594418dc136b79b892504aa4f72b3 243 Gene3D G3DSA:3.30.70.20 81 132 3.8E-27 T 22-04-2016 SCD_RS05995 c10594418dc136b79b892504aa4f72b3 243 Pfam PF12800 4Fe-4S binding domain 11 24 0.033 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS05995 c10594418dc136b79b892504aa4f72b3 243 PANTHER PTHR11938:SF107 50 180 2.8E-53 T 22-04-2016 SCD_RS05995 c10594418dc136b79b892504aa4f72b3 243 PANTHER PTHR11938:SF107 1 28 2.8E-53 T 22-04-2016 SCD_RS05995 c10594418dc136b79b892504aa4f72b3 243 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 106 117 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS05995 c10594418dc136b79b892504aa4f72b3 243 Pfam PF13247 4Fe-4S dicluster domain 66 167 2.4E-25 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS05995 c10594418dc136b79b892504aa4f72b3 243 SUPERFAMILY SSF54862 1 211 7.53E-69 T 22-04-2016 SCD_RS00770 ce329e408dafbc0fb0dba9bf1946b492 260 PANTHER PTHR30413 1 260 3.5E-70 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SCD_RS00770 ce329e408dafbc0fb0dba9bf1946b492 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 33 54 1.5E-43 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SCD_RS00770 ce329e408dafbc0fb0dba9bf1946b492 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 108 133 1.5E-43 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SCD_RS00770 ce329e408dafbc0fb0dba9bf1946b492 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 145 169 1.5E-43 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SCD_RS00770 ce329e408dafbc0fb0dba9bf1946b492 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 182 201 1.5E-43 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SCD_RS00770 ce329e408dafbc0fb0dba9bf1946b492 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 202 221 1.5E-43 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SCD_RS00770 ce329e408dafbc0fb0dba9bf1946b492 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 63 85 1.5E-43 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SCD_RS00770 ce329e408dafbc0fb0dba9bf1946b492 260 TIGRFAM TIGR01291 nodJ: ABC-2 type transporter, NodJ family 12 259 3.1E-74 T 22-04-2016 IPR005981 ABC-2 type transporter, NodJ GO:0005215|GO:0009877|GO:0015772|GO:0016020 SCD_RS00770 ce329e408dafbc0fb0dba9bf1946b492 260 Pfam PF01061 ABC-2 type transporter 17 221 1.1E-27 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 SCD_RS00770 ce329e408dafbc0fb0dba9bf1946b492 260 PIRSF PIRSF006648 3 259 2.9E-25 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SCD_RS00770 ce329e408dafbc0fb0dba9bf1946b492 260 PANTHER PTHR30413:SF7 1 260 3.5E-70 T 22-04-2016 SCD_RS11710 efa5badfe02e72b0780a8fc934ffd35f 170 Pfam PF01863 Protein of unknown function DUF45 70 154 7.7E-11 T 22-04-2016 IPR002725 Protein of unknown function DUF45 SCD_RS11710 efa5badfe02e72b0780a8fc934ffd35f 170 PANTHER PTHR30399 1 162 1.1E-94 T 22-04-2016 SCD_RS11710 efa5badfe02e72b0780a8fc934ffd35f 170 PANTHER PTHR30399:SF4 1 162 1.1E-94 T 22-04-2016 SCD_RS05105 e3699a3b0171949a700549e56711736c 292 Gene3D G3DSA:3.40.50.720 3 184 5.4E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS05105 e3699a3b0171949a700549e56711736c 292 SUPERFAMILY SSF48179 178 286 9.41E-35 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SCD_RS05105 e3699a3b0171949a700549e56711736c 292 Pfam PF02153 Prephenate dehydrogenase 20 276 7.0E-72 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 SCD_RS05105 e3699a3b0171949a700549e56711736c 292 PANTHER PTHR21363 1 286 3.3E-64 T 22-04-2016 SCD_RS05105 e3699a3b0171949a700549e56711736c 292 SUPERFAMILY SSF51735 7 174 1.0E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS05105 e3699a3b0171949a700549e56711736c 292 PANTHER PTHR21363:SF0 1 286 3.3E-64 T 22-04-2016 SCD_RS14965 c45c1cac6ef8430cd60607b9c333c3c5 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 174 4.5E-45 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SCD_RS14965 c45c1cac6ef8430cd60607b9c333c3c5 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 3.7E-50 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SCD_RS14965 c45c1cac6ef8430cd60607b9c333c3c5 178 SUPERFAMILY SSF47928 3 106 5.1E-26 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain SCD_RS14965 c45c1cac6ef8430cd60607b9c333c3c5 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 18.583 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SCD_RS14965 c45c1cac6ef8430cd60607b9c333c3c5 178 Gene3D G3DSA:1.10.520.20 2 105 5.5E-31 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain SCD_RS14965 c45c1cac6ef8430cd60607b9c333c3c5 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 2.8E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SCD_RS14965 c45c1cac6ef8430cd60607b9c333c3c5 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 2.8E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SCD_RS14965 c45c1cac6ef8430cd60607b9c333c3c5 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 2.8E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SCD_RS14965 c45c1cac6ef8430cd60607b9c333c3c5 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 2.8E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SCD_RS14965 c45c1cac6ef8430cd60607b9c333c3c5 178 PRINTS PR00125 ATP synthase delta subunit signature 86 100 2.8E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SCD_RS14965 c45c1cac6ef8430cd60607b9c333c3c5 178 PANTHER PTHR11910 8 173 3.5E-40 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SCD_RS14965 c45c1cac6ef8430cd60607b9c333c3c5 178 PANTHER PTHR11910:SF1 8 173 3.5E-40 T 22-04-2016 SCD_RS04205 6f9b4fef5c876b458934e1c4a9794ff9 161 Pfam PF02464 Competence-damaged protein 7 159 3.0E-58 T 22-04-2016 IPR008136 CinA, C-terminal SCD_RS04205 6f9b4fef5c876b458934e1c4a9794ff9 161 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 12 160 3.6E-49 T 22-04-2016 IPR008136 CinA, C-terminal SCD_RS04205 6f9b4fef5c876b458934e1c4a9794ff9 161 Gene3D G3DSA:3.90.950.20 4 160 7.7E-58 T 22-04-2016 IPR008136 CinA, C-terminal SCD_RS04205 6f9b4fef5c876b458934e1c4a9794ff9 161 SUPERFAMILY SSF142433 4 160 6.41E-55 T 22-04-2016 IPR008136 CinA, C-terminal SCD_RS04205 6f9b4fef5c876b458934e1c4a9794ff9 161 PANTHER PTHR13939 1 161 1.3E-69 T 22-04-2016 SCD_RS03425 918cf1ffc657e192b1c3e289ecff0899 412 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 30 407 1.3E-114 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SCD_RS03425 918cf1ffc657e192b1c3e289ecff0899 412 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 299 318 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SCD_RS03425 918cf1ffc657e192b1c3e289ecff0899 412 PANTHER PTHR11835 189 412 4.9E-240 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SCD_RS03425 918cf1ffc657e192b1c3e289ecff0899 412 PANTHER PTHR11835 1 165 4.9E-240 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SCD_RS03425 918cf1ffc657e192b1c3e289ecff0899 412 PANTHER PTHR11835:SF52 189 412 4.9E-240 T 22-04-2016 SCD_RS03425 918cf1ffc657e192b1c3e289ecff0899 412 PANTHER PTHR11835:SF52 1 165 4.9E-240 T 22-04-2016 SCD_RS03425 918cf1ffc657e192b1c3e289ecff0899 412 SMART SM01329 29 408 6.0E-178 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SCD_RS03425 918cf1ffc657e192b1c3e289ecff0899 412 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 412 1.1E-216 T 22-04-2016 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 SCD_RS03425 918cf1ffc657e192b1c3e289ecff0899 412 Gene3D G3DSA:3.40.718.10 12 412 7.9E-162 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SCD_RS03425 918cf1ffc657e192b1c3e289ecff0899 412 SUPERFAMILY SSF53659 3 412 7.49E-145 T 22-04-2016 SCD_RS03600 a763bf7a03ffd1effe737780f86ade6a 227 PANTHER PTHR30128 4 219 4.7E-32 T 22-04-2016 SCD_RS03600 a763bf7a03ffd1effe737780f86ade6a 227 Pfam PF00691 OmpA family 104 193 2.6E-22 T 22-04-2016 IPR006665 OmpA-like domain SCD_RS03600 a763bf7a03ffd1effe737780f86ade6a 227 SUPERFAMILY SSF103088 97 219 5.36E-32 T 22-04-2016 IPR006665 OmpA-like domain SCD_RS03600 a763bf7a03ffd1effe737780f86ade6a 227 PRINTS PR01021 OMPA domain signature 105 127 2.1E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SCD_RS03600 a763bf7a03ffd1effe737780f86ade6a 227 PRINTS PR01021 OMPA domain signature 137 152 2.1E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SCD_RS03600 a763bf7a03ffd1effe737780f86ade6a 227 PRINTS PR01021 OMPA domain signature 152 168 2.1E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SCD_RS03600 a763bf7a03ffd1effe737780f86ade6a 227 Gene3D G3DSA:3.30.1330.60 97 220 7.2E-39 T 22-04-2016 IPR006665 OmpA-like domain SCD_RS05865 e9147dd6f7577c10494aa3b673446d8f 202 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 7 199 3.0E-21 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 SCD_RS05865 e9147dd6f7577c10494aa3b673446d8f 202 Gene3D G3DSA:2.50.20.10 21 200 1.7E-62 T 22-04-2016 SCD_RS05865 e9147dd6f7577c10494aa3b673446d8f 202 PANTHER PTHR35869 1 202 3.0E-45 T 22-04-2016 SCD_RS05865 e9147dd6f7577c10494aa3b673446d8f 202 SUPERFAMILY SSF89392 21 201 6.67E-50 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX SCD_RS05865 e9147dd6f7577c10494aa3b673446d8f 202 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 30 192 5.4E-52 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like SCD_RS05865 e9147dd6f7577c10494aa3b673446d8f 202 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 6 202 30.759 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 SCD_RS13015 d9741384b8c62340af537bdccf9baff0 304 SUPERFAMILY SSF141371 186 284 5.1E-5 T 22-04-2016 SCD_RS13015 d9741384b8c62340af537bdccf9baff0 304 Pfam PF07238 PilZ domain 189 274 4.8E-5 T 22-04-2016 IPR009875 PilZ domain GO:0035438 SCD_RS07145 61f3ea6df5cdb821898730d55afa2f72 374 PANTHER PTHR30294 1 372 1.3E-99 T 22-04-2016 SCD_RS07145 61f3ea6df5cdb821898730d55afa2f72 374 Pfam PF12698 ABC-2 family transporter protein 27 366 2.6E-45 T 22-04-2016 SCD_RS07145 61f3ea6df5cdb821898730d55afa2f72 374 PANTHER PTHR30294:SF12 1 372 1.3E-99 T 22-04-2016 SCD_RS09530 6826fc3b7d2e416cc9183fa76b2397af 722 SUPERFAMILY SSF81296 11 107 1.51E-12 T 22-04-2016 IPR014756 Immunoglobulin E-set SCD_RS09530 6826fc3b7d2e416cc9183fa76b2397af 722 Pfam PF00128 Alpha amylase, catalytic domain 270 340 1.7E-9 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SCD_RS09530 6826fc3b7d2e416cc9183fa76b2397af 722 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 623 719 4.3E-20 T 22-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 SCD_RS09530 6826fc3b7d2e416cc9183fa76b2397af 722 PANTHER PTHR10357 43 720 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SCD_RS09530 6826fc3b7d2e416cc9183fa76b2397af 722 PANTHER PTHR10357:SF160 43 720 0.0 T 22-04-2016 SCD_RS09530 6826fc3b7d2e416cc9183fa76b2397af 722 PIRSF PIRSF000463 4 722 1.1E-293 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 SCD_RS09530 6826fc3b7d2e416cc9183fa76b2397af 722 SMART SM00642 245 612 1.7E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SCD_RS09530 6826fc3b7d2e416cc9183fa76b2397af 722 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 118 201 7.2E-24 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 SCD_RS09530 6826fc3b7d2e416cc9183fa76b2397af 722 SUPERFAMILY SSF81296 111 214 7.7E-31 T 22-04-2016 IPR014756 Immunoglobulin E-set SCD_RS09530 6826fc3b7d2e416cc9183fa76b2397af 722 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 102 718 1.2E-279 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 SCD_RS09530 6826fc3b7d2e416cc9183fa76b2397af 722 SUPERFAMILY SSF51445 166 611 9.11E-116 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SCD_RS09530 6826fc3b7d2e416cc9183fa76b2397af 722 SUPERFAMILY SSF51011 619 720 1.67E-35 T 22-04-2016 SCD_RS09530 6826fc3b7d2e416cc9183fa76b2397af 722 Gene3D G3DSA:2.60.40.1180 619 719 6.6E-35 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta SCD_RS09530 6826fc3b7d2e416cc9183fa76b2397af 722 Gene3D G3DSA:3.20.20.80 235 606 1.3E-91 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SCD_RS09530 6826fc3b7d2e416cc9183fa76b2397af 722 Gene3D G3DSA:2.60.40.10 106 214 3.2E-37 T 22-04-2016 IPR013783 Immunoglobulin-like fold SCD_RS09530 6826fc3b7d2e416cc9183fa76b2397af 722 Gene3D G3DSA:2.60.40.10 10 99 3.9E-7 T 22-04-2016 IPR013783 Immunoglobulin-like fold SCD_RS09530 6826fc3b7d2e416cc9183fa76b2397af 722 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 94 721 44.883 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 SCD_RS13830 9aa6c5aaa3ec7c075700f5f37fc952e4 393 Gene3D G3DSA:1.25.40.10 78 203 2.5E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS13830 9aa6c5aaa3ec7c075700f5f37fc952e4 393 Gene3D G3DSA:1.25.40.10 292 385 2.5E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS13830 9aa6c5aaa3ec7c075700f5f37fc952e4 393 Pfam PF07219 HemY protein N-terminus 26 130 3.9E-30 T 22-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 SCD_RS13830 9aa6c5aaa3ec7c075700f5f37fc952e4 393 SUPERFAMILY SSF48452 250 386 3.8E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS13830 9aa6c5aaa3ec7c075700f5f37fc952e4 393 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 3 385 3.1E-117 T 22-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 SCD_RS12400 c2746da3bdb5e8b0ac03d7d193b48b7b 335 Gene3D G3DSA:2.30.30.100 286 332 3.8E-9 T 22-04-2016 SCD_RS12400 c2746da3bdb5e8b0ac03d7d193b48b7b 335 SUPERFAMILY SSF46785 13 70 8.44E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS12400 c2746da3bdb5e8b0ac03d7d193b48b7b 335 SUPERFAMILY SSF50037 287 332 9.16E-6 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal SCD_RS12400 c2746da3bdb5e8b0ac03d7d193b48b7b 335 SUPERFAMILY SSF55681 87 283 2.36E-51 T 22-04-2016 SCD_RS12400 c2746da3bdb5e8b0ac03d7d193b48b7b 335 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 94 332 1.5E-52 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 SCD_RS12400 c2746da3bdb5e8b0ac03d7d193b48b7b 335 Pfam PF08279 HTH domain 18 67 2.1E-9 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 SCD_RS12400 c2746da3bdb5e8b0ac03d7d193b48b7b 335 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 15 332 28.941 T 22-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 SCD_RS12400 c2746da3bdb5e8b0ac03d7d193b48b7b 335 PANTHER PTHR12835 27 332 1.1E-60 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 SCD_RS12400 c2746da3bdb5e8b0ac03d7d193b48b7b 335 Pfam PF02237 Biotin protein ligase C terminal domain 289 332 4.4E-5 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 SCD_RS12400 c2746da3bdb5e8b0ac03d7d193b48b7b 335 Gene3D G3DSA:3.30.930.10 88 283 1.9E-51 T 22-04-2016 SCD_RS12400 c2746da3bdb5e8b0ac03d7d193b48b7b 335 Pfam PF03099 Biotin/lipoate A/B protein ligase family 100 221 9.2E-13 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 SCD_RS12400 c2746da3bdb5e8b0ac03d7d193b48b7b 335 Gene3D G3DSA:1.10.10.10 17 71 1.7E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS05570 d3f09cb52e642f374aeb39bc1f8b0891 919 Pfam PF13682 Chemoreceptor zinc-binding domain 813 880 7.9E-13 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SCD_RS05570 d3f09cb52e642f374aeb39bc1f8b0891 919 SMART SM00304 165 217 1.5E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS05570 d3f09cb52e642f374aeb39bc1f8b0891 919 SUPERFAMILY SSF55785 219 347 3.14E-15 T 22-04-2016 IPR000014 PAS domain SCD_RS05570 d3f09cb52e642f374aeb39bc1f8b0891 919 SMART SM00052 531 777 1.7E-102 T 22-04-2016 IPR001633 EAL domain SCD_RS05570 d3f09cb52e642f374aeb39bc1f8b0891 919 SUPERFAMILY SSF55073 365 522 4.79E-52 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS05570 d3f09cb52e642f374aeb39bc1f8b0891 919 SMART SM00267 349 521 3.8E-68 T 22-04-2016 IPR000160 GGDEF domain SCD_RS05570 d3f09cb52e642f374aeb39bc1f8b0891 919 SMART SM00091 231 296 2.3E-5 T 22-04-2016 IPR000014 PAS domain SCD_RS05570 d3f09cb52e642f374aeb39bc1f8b0891 919 Pfam PF13426 PAS domain 242 348 1.6E-8 T 22-04-2016 IPR000014 PAS domain SCD_RS05570 d3f09cb52e642f374aeb39bc1f8b0891 919 PANTHER PTHR10799 1 213 7.9E-69 T 22-04-2016 SCD_RS05570 d3f09cb52e642f374aeb39bc1f8b0891 919 PANTHER PTHR10799 239 631 7.9E-69 T 22-04-2016 SCD_RS05570 d3f09cb52e642f374aeb39bc1f8b0891 919 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 357 520 4.9E-44 T 22-04-2016 IPR000160 GGDEF domain SCD_RS05570 d3f09cb52e642f374aeb39bc1f8b0891 919 Pfam PF00990 Diguanylate cyclase, GGDEF domain 361 517 5.4E-50 T 22-04-2016 IPR000160 GGDEF domain SCD_RS05570 d3f09cb52e642f374aeb39bc1f8b0891 919 SUPERFAMILY SSF141868 538 787 2.09E-84 T 22-04-2016 IPR001633 EAL domain SCD_RS05570 d3f09cb52e642f374aeb39bc1f8b0891 919 Pfam PF00672 HAMP domain 149 213 1.2E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS05570 d3f09cb52e642f374aeb39bc1f8b0891 919 Pfam PF00563 EAL domain 537 772 3.0E-67 T 22-04-2016 IPR001633 EAL domain SCD_RS05570 d3f09cb52e642f374aeb39bc1f8b0891 919 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 232 351 7.6E-11 T 22-04-2016 IPR000014 PAS domain SCD_RS05570 d3f09cb52e642f374aeb39bc1f8b0891 919 Pfam PF16448 LapD/MoxY periplasmic domain 21 139 3.6E-12 T 22-04-2016 IPR032244 LapD/MoxY, periplasmic domain SCD_RS05570 d3f09cb52e642f374aeb39bc1f8b0891 919 Gene3D G3DSA:3.30.70.270 362 528 6.7E-61 T 22-04-2016 SCD_RS05570 d3f09cb52e642f374aeb39bc1f8b0891 919 Gene3D G3DSA:3.20.20.450 537 784 1.7E-88 T 22-04-2016 IPR001633 EAL domain SCD_RS05570 d3f09cb52e642f374aeb39bc1f8b0891 919 Gene3D G3DSA:3.30.450.20 227 347 4.2E-19 T 22-04-2016 SCD_RS05570 d3f09cb52e642f374aeb39bc1f8b0891 919 PANTHER PTHR10799:SF710 1 213 7.9E-69 T 22-04-2016 SCD_RS05570 d3f09cb52e642f374aeb39bc1f8b0891 919 PANTHER PTHR10799:SF710 239 631 7.9E-69 T 22-04-2016 SCD_RS06610 807406c0c7c6b01b82e67fa7d099155c 342 Pfam PF16363 GDP-mannose 4,6 dehydratase 8 329 2.4E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS06610 807406c0c7c6b01b82e67fa7d099155c 342 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 6 340 8.5E-136 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 SCD_RS06610 807406c0c7c6b01b82e67fa7d099155c 342 Gene3D G3DSA:3.40.50.720 2 182 3.3E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS06610 807406c0c7c6b01b82e67fa7d099155c 342 Gene3D G3DSA:3.90.25.10 269 341 1.2E-52 T 22-04-2016 SCD_RS06610 807406c0c7c6b01b82e67fa7d099155c 342 Gene3D G3DSA:3.90.25.10 183 235 1.2E-52 T 22-04-2016 SCD_RS06610 807406c0c7c6b01b82e67fa7d099155c 342 SUPERFAMILY SSF51735 1 340 2.72E-97 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS06610 807406c0c7c6b01b82e67fa7d099155c 342 PANTHER PTHR10366 6 342 3.4E-158 T 22-04-2016 SCD_RS06610 807406c0c7c6b01b82e67fa7d099155c 342 PANTHER PTHR10366:SF308 6 342 3.4E-158 T 22-04-2016 SCD_RS09645 a129c62edaf8b73d2a5f7449f0da514c 294 PANTHER PTHR23088 16 289 4.6E-102 T 22-04-2016 SCD_RS09645 a129c62edaf8b73d2a5f7449f0da514c 294 Gene3D G3DSA:3.60.110.10 21 290 9.5E-81 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SCD_RS09645 a129c62edaf8b73d2a5f7449f0da514c 294 Pfam PF00795 Carbon-nitrogen hydrolase 29 280 3.3E-56 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SCD_RS09645 a129c62edaf8b73d2a5f7449f0da514c 294 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 176 196 - T 22-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site SCD_RS09645 a129c62edaf8b73d2a5f7449f0da514c 294 SUPERFAMILY SSF56317 26 289 2.22E-77 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SCD_RS09645 a129c62edaf8b73d2a5f7449f0da514c 294 PANTHER PTHR23088:SF27 16 289 4.6E-102 T 22-04-2016 SCD_RS09715 9598ee4acbbc31a08ee0718a72287d16 286 PANTHER PTHR33525 1 234 3.6E-38 T 22-04-2016 SCD_RS09715 9598ee4acbbc31a08ee0718a72287d16 286 Pfam PF08668 HDOD domain 27 213 1.9E-43 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS09715 9598ee4acbbc31a08ee0718a72287d16 286 PANTHER PTHR33525:SF2 1 234 3.6E-38 T 22-04-2016 SCD_RS09715 9598ee4acbbc31a08ee0718a72287d16 286 Gene3D G3DSA:1.10.3150.10 17 278 1.0E-56 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS09715 9598ee4acbbc31a08ee0718a72287d16 286 TIGRFAM TIGR00277 HDIG: HDIG domain 124 213 8.1E-8 T 22-04-2016 IPR006675 HDIG domain SCD_RS09715 9598ee4acbbc31a08ee0718a72287d16 286 SUPERFAMILY SSF109604 20 277 1.96E-54 T 22-04-2016 SCD_RS09335 e8d96b4a33b94f27411ff53d1efdd212 672 Pfam PF03030 Inorganic H+ pyrophosphatase 13 668 8.6E-267 T 22-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 SCD_RS09335 e8d96b4a33b94f27411ff53d1efdd212 672 PIRSF PIRSF001265 3 672 4.6E-260 T 22-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 SCD_RS09335 e8d96b4a33b94f27411ff53d1efdd212 672 PANTHER PTHR31998 8 672 0.0 T 22-04-2016 SCD_RS09335 e8d96b4a33b94f27411ff53d1efdd212 672 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 9 672 2.4E-263 T 22-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 SCD_RS09335 e8d96b4a33b94f27411ff53d1efdd212 672 PANTHER PTHR31998:SF0 8 672 0.0 T 22-04-2016 SCD_RS09335 e8d96b4a33b94f27411ff53d1efdd212 672 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 2 672 25.322 T 22-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 SCD_RS14155 93a6538a416df610cea63f9be29e2631 380 PANTHER PTHR12526 2 373 1.0E-59 T 22-04-2016 SCD_RS14155 93a6538a416df610cea63f9be29e2631 380 Gene3D G3DSA:3.40.50.2000 161 338 2.5E-29 T 22-04-2016 SCD_RS14155 93a6538a416df610cea63f9be29e2631 380 Pfam PF00534 Glycosyl transferases group 1 194 340 4.7E-30 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SCD_RS14155 93a6538a416df610cea63f9be29e2631 380 Pfam PF13439 Glycosyltransferase Family 4 14 178 2.0E-21 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SCD_RS14155 93a6538a416df610cea63f9be29e2631 380 SUPERFAMILY SSF53756 3 371 8.9E-73 T 22-04-2016 SCD_RS05360 566e698f996822bfb29fa6f889406411 676 SUPERFAMILY SSF52540 222 237 1.4E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05360 566e698f996822bfb29fa6f889406411 676 SUPERFAMILY SSF52540 1 191 1.4E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05360 566e698f996822bfb29fa6f889406411 676 SUPERFAMILY SSF52540 460 629 1.4E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05360 566e698f996822bfb29fa6f889406411 676 Pfam PF13476 AAA domain 5 261 4.6E-19 T 22-04-2016 SCD_RS05360 566e698f996822bfb29fa6f889406411 676 TIGRFAM TIGR03185 DNA_S_dndD: DNA sulfur modification protein DndD 1 663 2.5E-175 T 22-04-2016 IPR017599 DNA sulphur modification protein DndD SCD_RS05360 566e698f996822bfb29fa6f889406411 676 Gene3D G3DSA:3.40.50.300 1 184 1.4E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05360 566e698f996822bfb29fa6f889406411 676 Gene3D G3DSA:3.40.50.300 520 629 1.4E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05360 566e698f996822bfb29fa6f889406411 676 Gene3D G3DSA:3.40.50.300 219 235 1.4E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04305 13fca26a74ff6bcd9dac18dc1d9beb42 259 Pfam PF03988 Repeat of Unknown Function (DUF347) 197 252 5.3E-17 T 22-04-2016 IPR007136 Protein of unknown function DUF347 SCD_RS04305 13fca26a74ff6bcd9dac18dc1d9beb42 259 Pfam PF03988 Repeat of Unknown Function (DUF347) 22 73 4.2E-16 T 22-04-2016 IPR007136 Protein of unknown function DUF347 SCD_RS04305 13fca26a74ff6bcd9dac18dc1d9beb42 259 Pfam PF03988 Repeat of Unknown Function (DUF347) 142 189 1.9E-13 T 22-04-2016 IPR007136 Protein of unknown function DUF347 SCD_RS04305 13fca26a74ff6bcd9dac18dc1d9beb42 259 Pfam PF03988 Repeat of Unknown Function (DUF347) 77 128 5.9E-11 T 22-04-2016 IPR007136 Protein of unknown function DUF347 SCD_RS06980 7beb21ef9de1b987e3070fa70ad297ac 125 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 94 1.2E-21 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SCD_RS06980 7beb21ef9de1b987e3070fa70ad297ac 125 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 124 5.0E-31 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SCD_RS06980 7beb21ef9de1b987e3070fa70ad297ac 125 SUPERFAMILY SSF56214 1 124 2.22E-26 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SCD_RS06980 7beb21ef9de1b987e3070fa70ad297ac 125 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 125 23.548 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SCD_RS06980 7beb21ef9de1b987e3070fa70ad297ac 125 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 124 4.0E-17 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SCD_RS06980 7beb21ef9de1b987e3070fa70ad297ac 125 Gene3D G3DSA:3.90.470.20 1 124 8.5E-36 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SCD_RS06980 7beb21ef9de1b987e3070fa70ad297ac 125 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 124 6.0E-25 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SCD_RS08410 e06f2052fc18127b31440923ba9e5cf6 240 PANTHER PTHR34933:SF2 10 240 1.7E-54 T 22-04-2016 SCD_RS08410 e06f2052fc18127b31440923ba9e5cf6 240 PRINTS PR01008 Flagellar L-ring protein signature 217 231 4.0E-18 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SCD_RS08410 e06f2052fc18127b31440923ba9e5cf6 240 PRINTS PR01008 Flagellar L-ring protein signature 180 196 4.0E-18 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SCD_RS08410 e06f2052fc18127b31440923ba9e5cf6 240 PRINTS PR01008 Flagellar L-ring protein signature 68 80 4.0E-18 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SCD_RS08410 e06f2052fc18127b31440923ba9e5cf6 240 PRINTS PR01008 Flagellar L-ring protein signature 201 215 4.0E-18 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SCD_RS08410 e06f2052fc18127b31440923ba9e5cf6 240 PANTHER PTHR34933 10 240 1.7E-54 T 22-04-2016 SCD_RS08410 e06f2052fc18127b31440923ba9e5cf6 240 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 238 26.003 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SCD_RS08410 e06f2052fc18127b31440923ba9e5cf6 240 Pfam PF02107 Flagellar L-ring protein 47 239 4.0E-60 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SCD_RS01570 1668df5f11dba3b4008f0b72fa2a273b 257 Pfam PF00950 ABC 3 transport family 9 154 8.5E-12 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 SCD_RS01570 1668df5f11dba3b4008f0b72fa2a273b 257 SUPERFAMILY SSF81345 6 237 1.23E-11 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SCD_RS00345 318a1c12d3c8c22861ba884a0c2d82db 99 SUPERFAMILY SSF69786 3 96 1.24E-27 T 22-04-2016 IPR003746 Protein of unknown function DUF167 SCD_RS00345 318a1c12d3c8c22861ba884a0c2d82db 99 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 96 18.475 T 22-04-2016 IPR003746 Protein of unknown function DUF167 SCD_RS00345 318a1c12d3c8c22861ba884a0c2d82db 99 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 9 84 7.4E-17 T 22-04-2016 IPR005228 Conserved hypothetical protein CHP00251 SCD_RS00345 318a1c12d3c8c22861ba884a0c2d82db 99 Gene3D G3DSA:3.30.1200.10 4 92 5.5E-31 T 22-04-2016 IPR003746 Protein of unknown function DUF167 SCD_RS00345 318a1c12d3c8c22861ba884a0c2d82db 99 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 82 4.3E-25 T 22-04-2016 IPR003746 Protein of unknown function DUF167 SCD_RS00345 318a1c12d3c8c22861ba884a0c2d82db 99 SMART SM01152 8 84 1.0E-32 T 22-04-2016 IPR003746 Protein of unknown function DUF167 SCD_RS00345 318a1c12d3c8c22861ba884a0c2d82db 99 PANTHER PTHR13420 12 92 1.0E-19 T 22-04-2016 SCD_RS14130 621cbfc5099b443d48c00626200dbe17 202 PANTHER PTHR23407 1 191 3.5E-52 T 22-04-2016 SCD_RS14130 621cbfc5099b443d48c00626200dbe17 202 Gene3D G3DSA:3.40.50.10420 3 192 1.0E-44 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SCD_RS14130 621cbfc5099b443d48c00626200dbe17 202 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 3 186 7.0E-40 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SCD_RS14130 621cbfc5099b443d48c00626200dbe17 202 PANTHER PTHR23407:SF1 1 191 3.5E-52 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SCD_RS14130 621cbfc5099b443d48c00626200dbe17 202 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 3 186 2.3E-31 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SCD_RS14130 621cbfc5099b443d48c00626200dbe17 202 SUPERFAMILY SSF100950 1 195 4.33E-50 T 22-04-2016 SCD_RS14130 621cbfc5099b443d48c00626200dbe17 202 PIRSF PIRSF006806 1 189 1.7E-34 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SCD_RS02735 e67804b6710553f60c081c2ca8d50cc9 180 PIRSF PIRSF027391 5 175 3.6E-31 T 22-04-2016 IPR014535 Predicted heptaprenyl diphosphate synthase, component I SCD_RS02735 e67804b6710553f60c081c2ca8d50cc9 180 Pfam PF07456 Heptaprenyl diphosphate synthase component I 17 163 9.4E-42 T 22-04-2016 IPR010898 Heptaprenyl diphosphate synthase component I SCD_RS02735 e67804b6710553f60c081c2ca8d50cc9 180 PANTHER PTHR41780:SF1 1 164 1.8E-26 T 22-04-2016 SCD_RS02735 e67804b6710553f60c081c2ca8d50cc9 180 PANTHER PTHR41780 1 164 1.8E-26 T 22-04-2016 SCD_RS03660 30be2d187dbdc49d433dc8f154338c22 926 Pfam PF12705 PD-(D/E)XK nuclease superfamily 665 919 5.7E-36 T 22-04-2016 SCD_RS03660 30be2d187dbdc49d433dc8f154338c22 926 SUPERFAMILY SSF52540 283 619 1.06E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07915 3c369d62b39b0fbba08146948584127c 163 Gene3D G3DSA:3.40.50.1450 5 152 4.0E-17 T 22-04-2016 IPR023430 Peptidase HybD-like domain SCD_RS07915 3c369d62b39b0fbba08146948584127c 163 SUPERFAMILY SSF53163 5 157 1.12E-24 T 22-04-2016 IPR023430 Peptidase HybD-like domain SCD_RS07915 3c369d62b39b0fbba08146948584127c 163 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 6 147 1.5E-18 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SCD_RS10240 035e9561eb1c04d44c19aef162c755a9 261 Gene3D G3DSA:3.40.50.150 59 244 3.3E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS10240 035e9561eb1c04d44c19aef162c755a9 261 SUPERFAMILY SSF53335 35 243 2.46E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS10240 035e9561eb1c04d44c19aef162c755a9 261 Pfam PF01209 ubiE/COQ5 methyltransferase family 30 258 6.9E-29 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SCD_RS10240 035e9561eb1c04d44c19aef162c755a9 261 PANTHER PTHR10108 30 187 1.3E-34 T 22-04-2016 SCD_RS10240 035e9561eb1c04d44c19aef162c755a9 261 PANTHER PTHR10108:SF24 30 187 1.3E-34 T 22-04-2016 SCD_RS09270 68589706b925637a9cd3d019b175caac 157 TIGRFAM TIGR04366 cupin_WbuC: cupin fold metalloprotein, WbuC family 6 139 2.5E-42 T 22-04-2016 IPR027565 Cupin fold metalloprotein, WbuC family SCD_RS09270 68589706b925637a9cd3d019b175caac 157 SUPERFAMILY SSF51182 40 127 5.94E-11 T 22-04-2016 IPR011051 RmlC-like cupin domain SCD_RS04360 730d6d28926f45a050e77acf17069e9a 1013 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 217 289 1.8E-24 T 22-04-2016 IPR020012 Motility protein FimV, N-terminal SCD_RS04360 730d6d28926f45a050e77acf17069e9a 1013 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 969 1012 7.9E-19 T 22-04-2016 IPR020011 Motility protein FimV, C-terminal SCD_RS04360 730d6d28926f45a050e77acf17069e9a 1013 Gene3D G3DSA:1.25.40.10 969 1008 1.2E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS04360 730d6d28926f45a050e77acf17069e9a 1013 Gene3D G3DSA:1.25.40.10 582 625 1.2E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS11355 5807cb085d5b0083d5e54ac19184fcf3 201 PANTHER PTHR32071 4 156 1.4E-22 T 22-04-2016 SCD_RS11355 5807cb085d5b0083d5e54ac19184fcf3 201 Gene3D G3DSA:3.40.50.2300 1 144 6.7E-31 T 22-04-2016 SCD_RS11355 5807cb085d5b0083d5e54ac19184fcf3 201 PANTHER PTHR32071:SF39 4 156 1.4E-22 T 22-04-2016 SCD_RS11355 5807cb085d5b0083d5e54ac19184fcf3 201 SMART SM00448 2 123 4.7E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS11355 5807cb085d5b0083d5e54ac19184fcf3 201 Pfam PF00072 Response regulator receiver domain 4 123 3.5E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS11355 5807cb085d5b0083d5e54ac19184fcf3 201 SUPERFAMILY SSF52172 1 147 1.39E-28 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS06200 9d02c06d73daeece78b7a5e5b5cfbada 264 PANTHER PTHR20854:SF4 1 255 3.4E-101 T 22-04-2016 SCD_RS06200 9d02c06d73daeece78b7a5e5b5cfbada 264 PRINTS PR01959 SuhB family inositol monophosphatase signature 196 208 1.5E-29 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 SCD_RS06200 9d02c06d73daeece78b7a5e5b5cfbada 264 PRINTS PR01959 SuhB family inositol monophosphatase signature 102 121 1.5E-29 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 SCD_RS06200 9d02c06d73daeece78b7a5e5b5cfbada 264 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.5E-29 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 SCD_RS06200 9d02c06d73daeece78b7a5e5b5cfbada 264 PRINTS PR01959 SuhB family inositol monophosphatase signature 154 180 1.5E-29 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 SCD_RS06200 9d02c06d73daeece78b7a5e5b5cfbada 264 Pfam PF00459 Inositol monophosphatase family 2 248 5.1E-65 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SCD_RS06200 9d02c06d73daeece78b7a5e5b5cfbada 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 128 151 3.8E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SCD_RS06200 9d02c06d73daeece78b7a5e5b5cfbada 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 79 95 3.8E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SCD_RS06200 9d02c06d73daeece78b7a5e5b5cfbada 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 3.8E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SCD_RS06200 9d02c06d73daeece78b7a5e5b5cfbada 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 175 196 3.8E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SCD_RS06200 9d02c06d73daeece78b7a5e5b5cfbada 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 3.8E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SCD_RS06200 9d02c06d73daeece78b7a5e5b5cfbada 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 206 230 3.8E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SCD_RS06200 9d02c06d73daeece78b7a5e5b5cfbada 264 SUPERFAMILY SSF56655 1 258 3.66E-86 T 22-04-2016 SCD_RS06200 9d02c06d73daeece78b7a5e5b5cfbada 264 PANTHER PTHR20854 1 255 3.4E-101 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SCD_RS06200 9d02c06d73daeece78b7a5e5b5cfbada 264 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 209 223 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 SCD_RS06200 9d02c06d73daeece78b7a5e5b5cfbada 264 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 79 92 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site SCD_RS06200 9d02c06d73daeece78b7a5e5b5cfbada 264 Gene3D G3DSA:3.30.540.10 2 155 1.2E-51 T 22-04-2016 SCD_RS06200 9d02c06d73daeece78b7a5e5b5cfbada 264 Gene3D G3DSA:3.40.190.80 156 255 4.4E-38 T 22-04-2016 SCD_RS04610 81367e31f8ff92e181dc5ef7ef2b0cc7 257 SUPERFAMILY SSF52540 8 244 5.56E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04610 81367e31f8ff92e181dc5ef7ef2b0cc7 257 Pfam PF00005 ABC transporter 26 181 9.0E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS04610 81367e31f8ff92e181dc5ef7ef2b0cc7 257 PANTHER PTHR24220 12 252 5.9E-147 T 22-04-2016 SCD_RS04610 81367e31f8ff92e181dc5ef7ef2b0cc7 257 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS04610 81367e31f8ff92e181dc5ef7ef2b0cc7 257 PANTHER PTHR24220:SF560 12 252 5.9E-147 T 22-04-2016 SCD_RS04610 81367e31f8ff92e181dc5ef7ef2b0cc7 257 Gene3D G3DSA:3.40.50.300 7 248 3.7E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04610 81367e31f8ff92e181dc5ef7ef2b0cc7 257 SMART SM00382 35 237 3.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS04610 81367e31f8ff92e181dc5ef7ef2b0cc7 257 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 13 257 8.6E-119 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 SCD_RS05025 575eea79a734b34e1998c8a812147889 263 Pfam PF13391 HNH endonuclease 154 204 1.7E-11 T 22-04-2016 IPR003615 HNH nuclease SCD_RS08595 33e1101b043da55ff238f94399f9cbd2 508 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 282 3.7E-65 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 SCD_RS08595 33e1101b043da55ff238f94399f9cbd2 508 PANTHER PTHR30389:SF1 1 508 0.0 T 22-04-2016 SCD_RS08595 33e1101b043da55ff238f94399f9cbd2 508 Pfam PF05683 Fumarase C-terminus 288 490 2.1E-81 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SCD_RS08595 33e1101b043da55ff238f94399f9cbd2 508 PIRSF PIRSF001394 1 507 5.9E-215 T 22-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 SCD_RS08595 33e1101b043da55ff238f94399f9cbd2 508 SUPERFAMILY SSF117457 316 488 3.53E-61 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SCD_RS08595 33e1101b043da55ff238f94399f9cbd2 508 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 326 488 6.3E-47 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SCD_RS08595 33e1101b043da55ff238f94399f9cbd2 508 PANTHER PTHR30389 1 508 0.0 T 22-04-2016 SCD_RS08595 33e1101b043da55ff238f94399f9cbd2 508 Gene3D G3DSA:3.20.130.10 302 489 5.9E-71 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SCD_RS08595 33e1101b043da55ff238f94399f9cbd2 508 Pfam PF05681 Fumarate hydratase (Fumerase) 12 284 3.2E-101 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 SCD_RS11185 1476b7092a939843086a3f3c0d2d6dc9 137 PANTHER PTHR22924 1 129 5.7E-36 T 22-04-2016 SCD_RS11185 1476b7092a939843086a3f3c0d2d6dc9 137 Pfam PF00042 Globin 6 98 5.5E-12 T 22-04-2016 IPR000971 Globin GO:0019825|GO:0020037 SCD_RS11185 1476b7092a939843086a3f3c0d2d6dc9 137 Gene3D G3DSA:1.10.490.10 1 134 1.3E-41 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 SCD_RS11185 1476b7092a939843086a3f3c0d2d6dc9 137 PRINTS PR00188 Plant globin signature 105 131 7.0E-6 T 22-04-2016 IPR001032 Leghaemoglobin GO:0019825|GO:0020037 SCD_RS11185 1476b7092a939843086a3f3c0d2d6dc9 137 PRINTS PR00188 Plant globin signature 27 47 7.0E-6 T 22-04-2016 IPR001032 Leghaemoglobin GO:0019825|GO:0020037 SCD_RS11185 1476b7092a939843086a3f3c0d2d6dc9 137 PRINTS PR00188 Plant globin signature 2 19 7.0E-6 T 22-04-2016 IPR001032 Leghaemoglobin GO:0019825|GO:0020037 SCD_RS11185 1476b7092a939843086a3f3c0d2d6dc9 137 SUPERFAMILY SSF46458 1 132 2.0E-38 T 22-04-2016 IPR009050 Globin-like SCD_RS08355 f37c863d56775cfc768d581769d723d7 427 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 316 1.9E-18 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SCD_RS08355 f37c863d56775cfc768d581769d723d7 427 Gene3D G3DSA:2.40.50.100 204 234 7.4E-16 T 22-04-2016 SCD_RS08355 f37c863d56775cfc768d581769d723d7 427 Gene3D G3DSA:2.40.50.100 78 112 7.4E-16 T 22-04-2016 SCD_RS08355 f37c863d56775cfc768d581769d723d7 427 SUPERFAMILY SSF111369 66 319 1.12E-18 T 22-04-2016 SCD_RS08355 f37c863d56775cfc768d581769d723d7 427 PANTHER PTHR30572 25 341 2.1E-68 T 22-04-2016 SCD_RS08355 f37c863d56775cfc768d581769d723d7 427 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 57 337 9.8E-43 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SCD_RS08355 f37c863d56775cfc768d581769d723d7 427 PANTHER PTHR30572:SF1 25 341 2.1E-68 T 22-04-2016 SCD_RS14930 0b45c7e60a81bfe05c39630178800789 254 Pfam PF13614 AAA domain 1 175 2.4E-39 T 22-04-2016 IPR025669 AAA domain SCD_RS14930 0b45c7e60a81bfe05c39630178800789 254 SUPERFAMILY SSF52540 3 249 2.57E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14930 0b45c7e60a81bfe05c39630178800789 254 PANTHER PTHR13696 1 252 3.6E-53 T 22-04-2016 SCD_RS14930 0b45c7e60a81bfe05c39630178800789 254 Gene3D G3DSA:3.40.50.300 1 249 2.3E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14930 0b45c7e60a81bfe05c39630178800789 254 PANTHER PTHR13696:SF52 1 252 3.6E-53 T 22-04-2016 SCD_RS14750 b49c07124c7184663b4ec89c369175c4 309 Pfam PF00432 Prenyltransferase and squalene oxidase repeat 215 235 6.3 T 22-04-2016 IPR001330 PFTB repeat GO:0003824 SCD_RS14750 b49c07124c7184663b4ec89c369175c4 309 Pfam PF00432 Prenyltransferase and squalene oxidase repeat 63 78 1.1 T 22-04-2016 IPR001330 PFTB repeat GO:0003824 SCD_RS14750 b49c07124c7184663b4ec89c369175c4 309 Pfam PF00432 Prenyltransferase and squalene oxidase repeat 257 277 4.3E-4 T 22-04-2016 IPR001330 PFTB repeat GO:0003824 SCD_RS14750 b49c07124c7184663b4ec89c369175c4 309 SUPERFAMILY SSF48239 190 205 4.4E-17 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid SCD_RS14750 b49c07124c7184663b4ec89c369175c4 309 SUPERFAMILY SSF48239 251 275 4.4E-17 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid SCD_RS14750 b49c07124c7184663b4ec89c369175c4 309 SUPERFAMILY SSF48239 14 113 4.4E-17 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid SCD_RS14750 b49c07124c7184663b4ec89c369175c4 309 Gene3D G3DSA:1.50.10.20 10 128 1.4E-11 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid SCD_RS14750 b49c07124c7184663b4ec89c369175c4 309 Gene3D G3DSA:1.50.10.20 190 275 9.8E-7 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid SCD_RS14750 b49c07124c7184663b4ec89c369175c4 309 SUPERFAMILY SSF48239 83 283 9.03E-11 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid SCD_RS11465 1c9eeee6427975b6a9bf49db54fd1d60 282 SUPERFAMILY SSF64397 2 220 7.85E-68 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 SCD_RS11465 1c9eeee6427975b6a9bf49db54fd1d60 282 Pfam PF01430 Hsp33 protein 1 261 1.2E-82 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 SCD_RS11465 1c9eeee6427975b6a9bf49db54fd1d60 282 Gene3D G3DSA:1.10.287.480 167 213 4.9E-18 T 22-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain SCD_RS11465 1c9eeee6427975b6a9bf49db54fd1d60 282 PIRSF PIRSF005261 1 272 6.4E-75 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 SCD_RS11465 1c9eeee6427975b6a9bf49db54fd1d60 282 SUPERFAMILY SSF118352 213 270 5.1E-19 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 SCD_RS11465 1c9eeee6427975b6a9bf49db54fd1d60 282 Gene3D G3DSA:3.55.30.10 1 163 6.9E-60 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 SCD_RS11465 1c9eeee6427975b6a9bf49db54fd1d60 282 PANTHER PTHR30111 1 276 2.7E-62 T 22-04-2016 SCD_RS11465 1c9eeee6427975b6a9bf49db54fd1d60 282 PANTHER PTHR30111:SF1 1 276 2.7E-62 T 22-04-2016 SCD_RS11465 1c9eeee6427975b6a9bf49db54fd1d60 282 Gene3D G3DSA:3.90.1280.10 214 270 1.2E-23 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 SCD_RS12005 e2f504691ca97909d2c963e36aa6c8e5 227 Pfam PF05552 Conserved TM helix 106 150 2.5E-8 T 22-04-2016 IPR008910 Conserved TM helix SCD_RS12005 e2f504691ca97909d2c963e36aa6c8e5 227 Pfam PF05552 Conserved TM helix 9 56 1.5E-11 T 22-04-2016 IPR008910 Conserved TM helix SCD_RS14990 5e99a1ff6dbab49f60c266731a77e8e1 282 SUPERFAMILY SSF110849 29 120 2.56E-27 T 22-04-2016 IPR003115 ParB/Sulfiredoxin SCD_RS14990 5e99a1ff6dbab49f60c266731a77e8e1 282 SUPERFAMILY SSF109709 110 219 2.88E-32 T 22-04-2016 SCD_RS14990 5e99a1ff6dbab49f60c266731a77e8e1 282 Gene3D G3DSA:3.90.1530.10 22 124 7.9E-39 T 22-04-2016 SCD_RS14990 5e99a1ff6dbab49f60c266731a77e8e1 282 PANTHER PTHR33375 1 282 1.7E-87 T 22-04-2016 SCD_RS14990 5e99a1ff6dbab49f60c266731a77e8e1 282 Pfam PF02195 ParB-like nuclease domain 30 118 2.1E-26 T 22-04-2016 IPR003115 ParB/Sulfiredoxin SCD_RS14990 5e99a1ff6dbab49f60c266731a77e8e1 282 SMART SM00470 28 118 7.3E-34 T 22-04-2016 IPR003115 ParB/Sulfiredoxin SCD_RS14990 5e99a1ff6dbab49f60c266731a77e8e1 282 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 26 202 3.7E-57 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 SCD_RS11935 845ed115ce53ac0cb43d12811e7efb7a 196 PANTHER PTHR20974 1 196 1.6E-86 T 22-04-2016 IPR010342 Protein of unknown function DUF938 SCD_RS11935 845ed115ce53ac0cb43d12811e7efb7a 196 PANTHER PTHR20974:SF0 1 196 1.6E-86 T 22-04-2016 SCD_RS11935 845ed115ce53ac0cb43d12811e7efb7a 196 SUPERFAMILY SSF53335 6 195 1.25E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS11935 845ed115ce53ac0cb43d12811e7efb7a 196 Gene3D G3DSA:3.40.50.150 16 176 2.1E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS11935 845ed115ce53ac0cb43d12811e7efb7a 196 Pfam PF06080 Protein of unknown function (DUF938) 2 195 2.4E-74 T 22-04-2016 IPR010342 Protein of unknown function DUF938 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 Pfam PF13181 Tetratricopeptide repeat 172 195 0.065 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 PANTHER PTHR23083 231 615 3.3E-76 T 22-04-2016 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 PANTHER PTHR23083 1 23 3.3E-76 T 22-04-2016 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 PANTHER PTHR23083 61 200 3.3E-76 T 22-04-2016 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 Pfam PF13414 TPR repeat 38 69 1.5E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 Pfam PF14559 Tetratricopeptide repeat 77 142 2.0E-9 T 22-04-2016 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 Pfam PF14559 Tetratricopeptide repeat 215 276 5.8E-6 T 22-04-2016 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 SUPERFAMILY SSF48452 337 648 3.16E-37 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 Gene3D G3DSA:1.25.40.10 451 702 7.0E-51 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 Gene3D G3DSA:1.25.40.10 33 259 4.5E-43 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 SUPERFAMILY SSF48452 38 332 2.18E-32 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 Gene3D G3DSA:1.25.40.10 260 343 2.3E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 Gene3D G3DSA:1.25.40.10 344 450 3.5E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 Pfam PF07719 Tetratricopeptide repeat 512 542 1.7E-5 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 SUPERFAMILY SSF48452 609 780 2.85E-20 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 SMART SM00028 544 577 47.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 SMART SM00028 31 64 2.9 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 SMART SM00028 235 268 28.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 SMART SM00028 715 748 29.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 SMART SM00028 340 373 2.1 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 SMART SM00028 510 543 1.3E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 SMART SM00028 442 475 24.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 SMART SM00028 578 611 0.0026 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 SMART SM00028 374 407 95.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 SMART SM00028 749 782 12.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 SMART SM00028 646 679 10.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 SMART SM00028 408 441 12.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 SMART SM00028 99 132 100.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 SMART SM00028 65 98 8.3E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 SMART SM00028 612 645 220.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 SMART SM00028 167 200 18.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 Gene3D G3DSA:1.25.40.10 703 781 7.8E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 Pfam PF13432 Tetratricopeptide repeat 651 696 5.7E-4 T 22-04-2016 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 Pfam PF13432 Tetratricopeptide repeat 550 609 8.3E-8 T 22-04-2016 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 Pfam PF13432 Tetratricopeptide repeat 350 407 1.0E-8 T 22-04-2016 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 Pfam PF13432 Tetratricopeptide repeat 417 474 4.4E-5 T 22-04-2016 SCD_RS06705 089432d4dccd0aa65ab6807f82b48b6d 795 Pfam PF13432 Tetratricopeptide repeat 721 774 8.5E-9 T 22-04-2016 SCD_RS03175 8ebbd044390a52a6e915994c9d3a35d7 131 Gene3D G3DSA:3.30.1370.30 2 72 3.0E-28 T 22-04-2016 SCD_RS03175 8ebbd044390a52a6e915994c9d3a35d7 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 32.311 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SCD_RS03175 8ebbd044390a52a6e915994c9d3a35d7 131 Gene3D G3DSA:3.30.1490.10 75 130 1.4E-26 T 22-04-2016 SCD_RS03175 8ebbd044390a52a6e915994c9d3a35d7 131 PANTHER PTHR11758 1 131 4.3E-56 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SCD_RS03175 8ebbd044390a52a6e915994c9d3a35d7 131 SUPERFAMILY SSF56047 2 130 7.06E-47 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SCD_RS03175 8ebbd044390a52a6e915994c9d3a35d7 131 Pfam PF00410 Ribosomal protein S8 5 130 4.6E-48 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SCD_RS03175 8ebbd044390a52a6e915994c9d3a35d7 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SCD_RS00730 513cefef08745df5773e0b1d30855ba1 263 SUPERFAMILY SSF56235 2 243 6.95E-26 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SCD_RS00730 513cefef08745df5773e0b1d30855ba1 263 Gene3D G3DSA:3.60.20.10 1 242 7.4E-41 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SCD_RS00730 513cefef08745df5773e0b1d30855ba1 263 Pfam PF13230 Glutamine amidotransferases class-II 1 198 1.6E-48 T 22-04-2016 IPR026869 Putative glutamine amidotransferase type 2 SCD_RS00730 513cefef08745df5773e0b1d30855ba1 263 PANTHER PTHR11907 1 244 1.4E-46 T 22-04-2016 SCD_RS00730 513cefef08745df5773e0b1d30855ba1 263 PANTHER PTHR11907:SF10 1 244 1.4E-46 T 22-04-2016 SCD_RS08230 5eaeea4b68693f2bed11c5a22cc3f97e 121 Gene3D G3DSA:1.20.1440.60 3 118 1.0E-32 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SCD_RS08230 5eaeea4b68693f2bed11c5a22cc3f97e 121 PANTHER PTHR38471:SF2 3 120 1.3E-33 T 22-04-2016 SCD_RS08230 5eaeea4b68693f2bed11c5a22cc3f97e 121 Pfam PF05635 23S rRNA-intervening sequence protein 7 111 7.3E-35 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SCD_RS08230 5eaeea4b68693f2bed11c5a22cc3f97e 121 SUPERFAMILY SSF158446 5 118 6.67E-37 T 22-04-2016 SCD_RS08230 5eaeea4b68693f2bed11c5a22cc3f97e 121 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 12 118 4.1E-33 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SCD_RS08230 5eaeea4b68693f2bed11c5a22cc3f97e 121 PANTHER PTHR38471 3 120 1.3E-33 T 22-04-2016 SCD_RS10260 290b440b0cdcb7a8a221ed33da8995f1 432 PANTHER PTHR11493:SF50 315 411 9.2E-54 T 22-04-2016 SCD_RS10260 290b440b0cdcb7a8a221ed33da8995f1 432 PANTHER PTHR11493:SF50 68 231 9.2E-54 T 22-04-2016 SCD_RS10260 290b440b0cdcb7a8a221ed33da8995f1 432 PANTHER PTHR11493 315 411 9.2E-54 T 22-04-2016 SCD_RS10260 290b440b0cdcb7a8a221ed33da8995f1 432 PANTHER PTHR11493 68 231 9.2E-54 T 22-04-2016 SCD_RS10260 290b440b0cdcb7a8a221ed33da8995f1 432 SUPERFAMILY SSF55124 5 159 1.44E-60 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SCD_RS10260 290b440b0cdcb7a8a221ed33da8995f1 432 Gene3D G3DSA:3.30.413.10 321 392 6.0E-30 T 22-04-2016 SCD_RS10260 290b440b0cdcb7a8a221ed33da8995f1 432 Gene3D G3DSA:3.30.413.10 160 234 6.0E-30 T 22-04-2016 SCD_RS10260 290b440b0cdcb7a8a221ed33da8995f1 432 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 160 396 6.9E-34 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SCD_RS10260 290b440b0cdcb7a8a221ed33da8995f1 432 SUPERFAMILY SSF54862 220 312 1.47E-10 T 22-04-2016 SCD_RS10260 290b440b0cdcb7a8a221ed33da8995f1 432 TIGRFAM TIGR02064 dsrA: sulfite reductase, dissimilatory-type alpha subunit 11 426 2.7E-152 T 22-04-2016 IPR011806 Sulphite reductase, dissimilatory-type alpha subunit GO:0018551|GO:0020037|GO:0051539|GO:0055114 SCD_RS10260 290b440b0cdcb7a8a221ed33da8995f1 432 SUPERFAMILY SSF56014 320 418 2.09E-49 T 22-04-2016 SCD_RS10260 290b440b0cdcb7a8a221ed33da8995f1 432 SUPERFAMILY SSF56014 160 234 2.09E-49 T 22-04-2016 SCD_RS10260 290b440b0cdcb7a8a221ed33da8995f1 432 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 151 4.2E-10 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SCD_RS00690 7dac2e83a79583116d78918eaec9375e 219 SMART SM00418 16 94 2.6E-23 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SCD_RS00690 7dac2e83a79583116d78918eaec9375e 219 SUPERFAMILY SSF46785 10 114 2.23E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS00690 7dac2e83a79583116d78918eaec9375e 219 Pfam PF01022 Bacterial regulatory protein, arsR family 25 69 7.4E-11 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SCD_RS00690 7dac2e83a79583116d78918eaec9375e 219 SMART SM00450 120 216 2.7E-25 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS00690 7dac2e83a79583116d78918eaec9375e 219 Gene3D G3DSA:1.10.10.10 6 99 1.2E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS00690 7dac2e83a79583116d78918eaec9375e 219 PANTHER PTHR12231:SF137 107 219 1.3E-25 T 22-04-2016 SCD_RS00690 7dac2e83a79583116d78918eaec9375e 219 SUPERFAMILY SSF52821 111 218 1.24E-29 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS00690 7dac2e83a79583116d78918eaec9375e 219 Gene3D G3DSA:3.40.250.10 112 218 1.3E-26 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS00690 7dac2e83a79583116d78918eaec9375e 219 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 2.8E-11 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SCD_RS00690 7dac2e83a79583116d78918eaec9375e 219 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 2.8E-11 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SCD_RS00690 7dac2e83a79583116d78918eaec9375e 219 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 50 65 2.8E-11 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SCD_RS00690 7dac2e83a79583116d78918eaec9375e 219 Pfam PF00581 Rhodanese-like domain 126 211 2.3E-16 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS00690 7dac2e83a79583116d78918eaec9375e 219 PANTHER PTHR12231 107 219 1.3E-25 T 22-04-2016 SCD_RS01325 034328d971a434251e6dc0e0df899d43 280 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 30 242 2.0E-59 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 SCD_RS01325 034328d971a434251e6dc0e0df899d43 280 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 13 252 2.9E-56 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 SCD_RS10415 ff935da640a2e981d92cdeb0b47b4d4e 322 Pfam PF00348 Polyprenyl synthetase 32 261 7.5E-75 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SCD_RS10415 ff935da640a2e981d92cdeb0b47b4d4e 322 Gene3D G3DSA:1.10.600.10 4 321 3.3E-98 T 22-04-2016 IPR008949 Isoprenoid synthase domain SCD_RS10415 ff935da640a2e981d92cdeb0b47b4d4e 322 SUPERFAMILY SSF48576 5 322 1.07E-99 T 22-04-2016 IPR008949 Isoprenoid synthase domain SCD_RS10415 ff935da640a2e981d92cdeb0b47b4d4e 322 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SCD_RS10415 ff935da640a2e981d92cdeb0b47b4d4e 322 PANTHER PTHR12001 6 322 1.3E-111 T 22-04-2016 IPR017446 Polyprenyl synthetase-related SCD_RS10415 ff935da640a2e981d92cdeb0b47b4d4e 322 PANTHER PTHR12001:SF47 6 322 1.3E-111 T 22-04-2016 SCD_RS10415 ff935da640a2e981d92cdeb0b47b4d4e 322 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SCD_RS06410 00e0d8f1dd43c6cee15fd000856f8a5b 61 Gene3D G3DSA:3.30.429.20 1 59 6.5E-20 T 22-04-2016 SCD_RS06410 00e0d8f1dd43c6cee15fd000856f8a5b 61 Pfam PF01361 Tautomerase enzyme 2 58 1.1E-16 T 22-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 SCD_RS06410 00e0d8f1dd43c6cee15fd000856f8a5b 61 PANTHER PTHR35530 1 59 6.3E-13 T 22-04-2016 SCD_RS06410 00e0d8f1dd43c6cee15fd000856f8a5b 61 SUPERFAMILY SSF55331 2 58 4.19E-18 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily SCD_RS06410 00e0d8f1dd43c6cee15fd000856f8a5b 61 PANTHER PTHR35530:SF1 1 59 6.3E-13 T 22-04-2016 SCD_RS09310 7608404ff2e9481a5ff9d8a53c3d2146 199 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 70 81 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS09310 7608404ff2e9481a5ff9d8a53c3d2146 199 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 26 37 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS09310 7608404ff2e9481a5ff9d8a53c3d2146 199 SUPERFAMILY SSF46548 21 99 1.64E-14 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SCD_RS09310 7608404ff2e9481a5ff9d8a53c3d2146 199 Pfam PF13183 4Fe-4S dicluster domain 24 83 4.0E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS09310 7608404ff2e9481a5ff9d8a53c3d2146 199 Gene3D G3DSA:1.10.1060.10 17 98 2.8E-12 T 22-04-2016 SCD_RS09380 a8e0a18a1f524aeaf5085048db0257ca 449 PANTHER PTHR30008:SF0 6 447 7.2E-161 T 22-04-2016 SCD_RS09380 a8e0a18a1f524aeaf5085048db0257ca 449 Pfam PF02601 Exonuclease VII, large subunit 130 440 5.0E-100 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 SCD_RS09380 a8e0a18a1f524aeaf5085048db0257ca 449 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 11 443 29.205 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SCD_RS09380 a8e0a18a1f524aeaf5085048db0257ca 449 PANTHER PTHR30008 6 447 7.2E-161 T 22-04-2016 SCD_RS09380 a8e0a18a1f524aeaf5085048db0257ca 449 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 15 356 8.0E-134 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SCD_RS09380 a8e0a18a1f524aeaf5085048db0257ca 449 Pfam PF13742 OB-fold nucleic acid binding domain 14 106 1.7E-29 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 Gene3D G3DSA:3.90.740.10 196 338 6.1E-49 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 Gene3D G3DSA:1.10.730.10 601 787 2.8E-66 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 16 601 2.6E-211 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 SUPERFAMILY SSF46589 846 910 3.03E-17 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 44 55 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 Hamap MF_02004 Valine--tRNA ligase [valS]. 3 911 16.034 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 Gene3D G3DSA:1.10.287.380 842 911 2.2E-7 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 PANTHER PTHR11946 578 824 0.0 T 22-04-2016 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 PANTHER PTHR11946 842 906 0.0 T 22-04-2016 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 PANTHER PTHR11946 1 540 0.0 T 22-04-2016 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 Gene3D G3DSA:3.40.50.620 579 600 5.1E-143 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 Gene3D G3DSA:3.40.50.620 5 194 5.1E-143 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 Gene3D G3DSA:3.40.50.620 342 541 5.1E-143 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 846 911 1.1E-18 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 Pfam PF08264 Anticodon-binding domain of tRNA 645 793 1.4E-42 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 SUPERFAMILY SSF47323 612 861 8.6E-65 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 PANTHER PTHR11946:SF5 578 824 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 PANTHER PTHR11946:SF5 842 906 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 PANTHER PTHR11946:SF5 1 540 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 TIGRFAM TIGR00422 valS: valine--tRNA ligase 4 893 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 SUPERFAMILY SSF52374 3 193 2.94E-137 T 22-04-2016 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 SUPERFAMILY SSF52374 342 541 2.94E-137 T 22-04-2016 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 SUPERFAMILY SSF52374 579 611 2.94E-137 T 22-04-2016 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 SUPERFAMILY SSF50677 192 343 4.32E-62 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 PRINTS PR00986 Valyl-tRNA synthetase signature 231 248 1.9E-38 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 PRINTS PR00986 Valyl-tRNA synthetase signature 476 494 1.9E-38 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 PRINTS PR00986 Valyl-tRNA synthetase signature 37 48 1.9E-38 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 PRINTS PR00986 Valyl-tRNA synthetase signature 347 360 1.9E-38 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SCD_RS04015 748b057bad250e9636e5acdea33766a6 911 PRINTS PR00986 Valyl-tRNA synthetase signature 445 466 1.9E-38 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SCD_RS11545 542efb679efbf7d995b2edfa1164ea6b 309 SUPERFAMILY SSF53448 5 216 4.5E-58 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS11545 542efb679efbf7d995b2edfa1164ea6b 309 Gene3D G3DSA:3.90.550.10 5 224 2.1E-60 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS11545 542efb679efbf7d995b2edfa1164ea6b 309 Pfam PF00535 Glycosyl transferase family 2 6 167 1.6E-32 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SCD_RS11545 542efb679efbf7d995b2edfa1164ea6b 309 PANTHER PTHR22916 5 240 1.2E-54 T 22-04-2016 SCD_RS00640 e417e30640958d05e0c577ac3a4859c8 462 Pfam PF05598 Transposase domain (DUF772) 52 128 9.4E-26 T 22-04-2016 IPR008490 Transposase InsH, N-terminal SCD_RS00640 e417e30640958d05e0c577ac3a4859c8 462 PANTHER PTHR33408:SF2 1 449 2.4E-23 T 22-04-2016 SCD_RS00640 e417e30640958d05e0c577ac3a4859c8 462 PANTHER PTHR33408 1 449 2.4E-23 T 22-04-2016 SCD_RS00640 e417e30640958d05e0c577ac3a4859c8 462 Pfam PF13751 Transposase DDE domain 320 445 6.0E-16 T 22-04-2016 IPR025668 Transposase DDE domain SCD_RS10705 5bf3961e2afe906eb12ebd660abfd8d3 383 Gene3D G3DSA:3.50.50.60 2 104 4.3E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS10705 5bf3961e2afe906eb12ebd660abfd8d3 383 SUPERFAMILY SSF51905 2 302 2.7E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS10705 5bf3961e2afe906eb12ebd660abfd8d3 383 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 278 5.9E-14 T 22-04-2016 SCD_RS10705 5bf3961e2afe906eb12ebd660abfd8d3 383 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 5.9E-14 T 22-04-2016 SCD_RS10705 5bf3961e2afe906eb12ebd660abfd8d3 383 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 246 5.9E-14 T 22-04-2016 SCD_RS10705 5bf3961e2afe906eb12ebd660abfd8d3 383 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 171 5.9E-14 T 22-04-2016 SCD_RS10705 5bf3961e2afe906eb12ebd660abfd8d3 383 Gene3D G3DSA:3.50.50.60 105 301 2.9E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS10705 5bf3961e2afe906eb12ebd660abfd8d3 383 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 281 3.0E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS10705 5bf3961e2afe906eb12ebd660abfd8d3 383 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 1.8E-22 T 22-04-2016 SCD_RS10705 5bf3961e2afe906eb12ebd660abfd8d3 383 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 1.8E-22 T 22-04-2016 SCD_RS10705 5bf3961e2afe906eb12ebd660abfd8d3 383 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 1.8E-22 T 22-04-2016 SCD_RS10705 5bf3961e2afe906eb12ebd660abfd8d3 383 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 1.8E-22 T 22-04-2016 SCD_RS10705 5bf3961e2afe906eb12ebd660abfd8d3 383 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.8E-22 T 22-04-2016 SCD_RS10705 5bf3961e2afe906eb12ebd660abfd8d3 383 PANTHER PTHR22912 5 371 2.6E-111 T 22-04-2016 SCD_RS10705 5bf3961e2afe906eb12ebd660abfd8d3 383 PANTHER PTHR22912:SF130 5 371 2.6E-111 T 22-04-2016 SCD_RS09220 45259922767638b7d40f43c0b265a8b6 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 9.8E-44 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SCD_RS09220 45259922767638b7d40f43c0b265a8b6 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 4.0E-100 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SCD_RS09220 45259922767638b7d40f43c0b265a8b6 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 47.521 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SCD_RS09220 45259922767638b7d40f43c0b265a8b6 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 22-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SCD_RS09220 45259922767638b7d40f43c0b265a8b6 264 Pfam PF00303 Thymidylate synthase 2 264 2.0E-127 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SCD_RS09220 45259922767638b7d40f43c0b265a8b6 264 SUPERFAMILY SSF55831 1 264 1.03E-134 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SCD_RS09220 45259922767638b7d40f43c0b265a8b6 264 Gene3D G3DSA:3.30.572.10 1 264 1.2E-138 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SCD_RS09220 45259922767638b7d40f43c0b265a8b6 264 PANTHER PTHR11548 1 264 5.2E-201 T 22-04-2016 SCD_RS09220 45259922767638b7d40f43c0b265a8b6 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 5.48E-50 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SCD_RS09220 45259922767638b7d40f43c0b265a8b6 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 5.48E-50 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SCD_RS09220 45259922767638b7d40f43c0b265a8b6 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 5.48E-50 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SCD_RS09220 45259922767638b7d40f43c0b265a8b6 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 5.48E-50 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SCD_RS09220 45259922767638b7d40f43c0b265a8b6 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 5.48E-50 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SCD_RS13270 27503322a13a4824223f3c1982354036 164 SUPERFAMILY SSF54523 6 69 1.18E-14 T 22-04-2016 SCD_RS13270 27503322a13a4824223f3c1982354036 164 Gene3D G3DSA:3.30.700.10 6 89 1.3E-8 T 22-04-2016 SCD_RS13270 27503322a13a4824223f3c1982354036 164 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 26 5.4E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS13270 27503322a13a4824223f3c1982354036 164 PANTHER PTHR30093 2 58 3.6E-18 T 22-04-2016 SCD_RS13270 27503322a13a4824223f3c1982354036 164 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS13270 27503322a13a4824223f3c1982354036 164 PANTHER PTHR30093:SF7 2 58 3.6E-18 T 22-04-2016 SCD_RS13270 27503322a13a4824223f3c1982354036 164 Pfam PF13633 Prokaryotic N-terminal methylation site 3 28 2.4E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS06990 ebda6926e751d3234aff9a9edab5c052 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 650 669 8.1E-14 T 22-04-2016 SCD_RS06990 ebda6926e751d3234aff9a9edab5c052 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 680 699 8.1E-14 T 22-04-2016 SCD_RS06990 ebda6926e751d3234aff9a9edab5c052 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 710 728 8.1E-14 T 22-04-2016 SCD_RS06990 ebda6926e751d3234aff9a9edab5c052 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 569 585 8.1E-14 T 22-04-2016 SCD_RS06990 ebda6926e751d3234aff9a9edab5c052 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 62 81 8.1E-14 T 22-04-2016 SCD_RS06990 ebda6926e751d3234aff9a9edab5c052 806 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 653 753 6.3E-9 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 SCD_RS06990 ebda6926e751d3234aff9a9edab5c052 806 PANTHER PTHR10046 112 764 3.5E-109 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 SCD_RS06990 ebda6926e751d3234aff9a9edab5c052 806 SUPERFAMILY SSF54211 567 761 1.52E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SCD_RS06990 ebda6926e751d3234aff9a9edab5c052 806 SUPERFAMILY SSF52540 36 91 6.02E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06990 ebda6926e751d3234aff9a9edab5c052 806 SUPERFAMILY SSF52540 310 542 6.02E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06990 ebda6926e751d3234aff9a9edab5c052 806 Pfam PF13654 AAA domain 34 543 2.0E-162 T 22-04-2016 SCD_RS06990 ebda6926e751d3234aff9a9edab5c052 806 PANTHER PTHR10046:SF46 112 764 3.5E-109 T 22-04-2016 SCD_RS06990 ebda6926e751d3234aff9a9edab5c052 806 Gene3D G3DSA:3.30.230.10 565 759 2.2E-27 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SCD_RS05095 cd22cddcaf115764d89bccb38ca664f2 369 Gene3D G3DSA:3.40.640.10 50 267 5.6E-70 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS05095 cd22cddcaf115764d89bccb38ca664f2 369 PANTHER PTHR11751 22 366 1.6E-95 T 22-04-2016 SCD_RS05095 cd22cddcaf115764d89bccb38ca664f2 369 Pfam PF00155 Aminotransferase class I and II 36 359 3.5E-53 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SCD_RS05095 cd22cddcaf115764d89bccb38ca664f2 369 PANTHER PTHR11751:SF347 22 366 1.6E-95 T 22-04-2016 SCD_RS05095 cd22cddcaf115764d89bccb38ca664f2 369 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 225 234 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 SCD_RS05095 cd22cddcaf115764d89bccb38ca664f2 369 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 6 364 60.128 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 SCD_RS05095 cd22cddcaf115764d89bccb38ca664f2 369 SUPERFAMILY SSF53383 16 364 1.36E-81 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS05095 cd22cddcaf115764d89bccb38ca664f2 369 Gene3D G3DSA:3.90.1150.10 268 366 1.8E-18 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS05095 cd22cddcaf115764d89bccb38ca664f2 369 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 11 362 8.0E-106 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 SCD_RS01055 bd0a4d684ed5200b41ffacc29b5cd900 303 PANTHER PTHR33446:SF2 20 300 1.1E-18 T 22-04-2016 SCD_RS01055 bd0a4d684ed5200b41ffacc29b5cd900 303 PANTHER PTHR33446 20 300 1.1E-18 T 22-04-2016 SCD_RS01055 bd0a4d684ed5200b41ffacc29b5cd900 303 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 211 279 3.0E-16 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SCD_RS01055 bd0a4d684ed5200b41ffacc29b5cd900 303 Gene3D G3DSA:3.30.1150.10 184 293 5.9E-22 T 22-04-2016 SCD_RS01055 bd0a4d684ed5200b41ffacc29b5cd900 303 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 213 290 1.1E-15 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SCD_RS01055 bd0a4d684ed5200b41ffacc29b5cd900 303 SUPERFAMILY SSF74653 180 292 6.93E-22 T 22-04-2016 SCD_RS07275 78656bdc2f1217e269cf9df56c5d9f4c 550 SMART SM00267 377 548 3.3E-56 T 22-04-2016 IPR000160 GGDEF domain SCD_RS07275 78656bdc2f1217e269cf9df56c5d9f4c 550 SUPERFAMILY SSF55073 393 547 5.96E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS07275 78656bdc2f1217e269cf9df56c5d9f4c 550 Pfam PF00990 Diguanylate cyclase, GGDEF domain 390 544 4.4E-41 T 22-04-2016 IPR000160 GGDEF domain SCD_RS07275 78656bdc2f1217e269cf9df56c5d9f4c 550 Gene3D G3DSA:3.30.70.270 390 547 1.3E-50 T 22-04-2016 SCD_RS07275 78656bdc2f1217e269cf9df56c5d9f4c 550 Pfam PF00072 Response regulator receiver domain 137 249 1.7E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS07275 78656bdc2f1217e269cf9df56c5d9f4c 550 Pfam PF00072 Response regulator receiver domain 263 374 8.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS07275 78656bdc2f1217e269cf9df56c5d9f4c 550 Gene3D G3DSA:3.40.50.2300 136 253 2.0E-20 T 22-04-2016 SCD_RS07275 78656bdc2f1217e269cf9df56c5d9f4c 550 SUPERFAMILY SSF52172 259 388 1.31E-33 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS07275 78656bdc2f1217e269cf9df56c5d9f4c 550 Pfam PF01627 Hpt domain 15 107 6.3E-13 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS07275 78656bdc2f1217e269cf9df56c5d9f4c 550 Gene3D G3DSA:1.20.120.160 11 120 2.4E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS07275 78656bdc2f1217e269cf9df56c5d9f4c 550 PANTHER PTHR26402 261 384 1.1E-31 T 22-04-2016 SCD_RS07275 78656bdc2f1217e269cf9df56c5d9f4c 550 Gene3D G3DSA:3.40.50.2300 258 384 3.8E-31 T 22-04-2016 SCD_RS07275 78656bdc2f1217e269cf9df56c5d9f4c 550 SUPERFAMILY SSF47226 14 120 2.22E-13 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS07275 78656bdc2f1217e269cf9df56c5d9f4c 550 SUPERFAMILY SSF52172 136 253 3.42E-21 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS07275 78656bdc2f1217e269cf9df56c5d9f4c 550 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 388 548 3.8E-47 T 22-04-2016 IPR000160 GGDEF domain SCD_RS07275 78656bdc2f1217e269cf9df56c5d9f4c 550 SMART SM00448 135 249 1.0E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS07275 78656bdc2f1217e269cf9df56c5d9f4c 550 SMART SM00448 261 374 7.0E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS15545 8ecb273f72a4e9723e213a2b40b617f6 773 PANTHER PTHR10799 318 765 7.6E-41 T 22-04-2016 SCD_RS15545 8ecb273f72a4e9723e213a2b40b617f6 773 Pfam PF00990 Diguanylate cyclase, GGDEF domain 609 766 6.4E-55 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15545 8ecb273f72a4e9723e213a2b40b617f6 773 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 356 483 3.6E-12 T 22-04-2016 IPR000014 PAS domain SCD_RS15545 8ecb273f72a4e9723e213a2b40b617f6 773 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 488 604 2.7E-22 T 22-04-2016 IPR000014 PAS domain SCD_RS15545 8ecb273f72a4e9723e213a2b40b617f6 773 SUPERFAMILY SSF55073 614 771 1.08E-55 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS15545 8ecb273f72a4e9723e213a2b40b617f6 773 Pfam PF03924 CHASE domain 78 266 1.8E-55 T 22-04-2016 IPR006189 CHASE domain SCD_RS15545 8ecb273f72a4e9723e213a2b40b617f6 773 Pfam PF08448 PAS fold 366 478 7.3E-18 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS15545 8ecb273f72a4e9723e213a2b40b617f6 773 SUPERFAMILY SSF55785 489 596 3.49E-28 T 22-04-2016 IPR000014 PAS domain SCD_RS15545 8ecb273f72a4e9723e213a2b40b617f6 773 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 607 769 1.3E-47 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15545 8ecb273f72a4e9723e213a2b40b617f6 773 Gene3D G3DSA:3.30.450.20 349 473 5.6E-20 T 22-04-2016 SCD_RS15545 8ecb273f72a4e9723e213a2b40b617f6 773 PANTHER PTHR10799:SF774 318 765 7.6E-41 T 22-04-2016 SCD_RS15545 8ecb273f72a4e9723e213a2b40b617f6 773 SMART SM00091 484 550 3.1E-7 T 22-04-2016 IPR000014 PAS domain SCD_RS15545 8ecb273f72a4e9723e213a2b40b617f6 773 SMART SM00091 360 428 9.0E-7 T 22-04-2016 IPR000014 PAS domain SCD_RS15545 8ecb273f72a4e9723e213a2b40b617f6 773 SMART SM00267 598 770 8.6E-71 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15545 8ecb273f72a4e9723e213a2b40b617f6 773 SUPERFAMILY SSF55785 348 474 3.32E-19 T 22-04-2016 IPR000014 PAS domain SCD_RS15545 8ecb273f72a4e9723e213a2b40b617f6 773 Pfam PF13426 PAS domain 495 597 3.1E-15 T 22-04-2016 IPR000014 PAS domain SCD_RS15545 8ecb273f72a4e9723e213a2b40b617f6 773 Gene3D G3DSA:3.30.70.270 610 772 2.1E-61 T 22-04-2016 SCD_RS15545 8ecb273f72a4e9723e213a2b40b617f6 773 Gene3D G3DSA:3.30.450.20 474 591 5.3E-30 T 22-04-2016 SCD_RS15545 8ecb273f72a4e9723e213a2b40b617f6 773 SMART SM01079 75 268 7.4E-68 T 22-04-2016 IPR006189 CHASE domain SCD_RS15545 8ecb273f72a4e9723e213a2b40b617f6 773 SMART SM00086 434 476 26.0 T 22-04-2016 IPR001610 PAC motif SCD_RS15545 8ecb273f72a4e9723e213a2b40b617f6 773 SMART SM00086 556 598 1.4E-6 T 22-04-2016 IPR001610 PAC motif SCD_RS11130 3bceeb8463036b6274ab2c5942083d97 588 ProSitePatterns PS00079 Multicopper oxidases signature 1. 149 169 - T 22-04-2016 IPR033138 Multicopper oxidases, conserved site SCD_RS11130 3bceeb8463036b6274ab2c5942083d97 588 ProSitePatterns PS00079 Multicopper oxidases signature 1. 565 585 - T 22-04-2016 IPR033138 Multicopper oxidases, conserved site SCD_RS11130 3bceeb8463036b6274ab2c5942083d97 588 Pfam PF00394 Multicopper oxidase 184 361 3.5E-29 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 SCD_RS11130 3bceeb8463036b6274ab2c5942083d97 588 Gene3D G3DSA:2.60.40.420 453 587 1.9E-34 T 22-04-2016 IPR008972 Cupredoxin SCD_RS11130 3bceeb8463036b6274ab2c5942083d97 588 Gene3D G3DSA:2.60.40.420 56 173 3.8E-36 T 22-04-2016 IPR008972 Cupredoxin SCD_RS11130 3bceeb8463036b6274ab2c5942083d97 588 Pfam PF07731 Multicopper oxidase 473 587 1.9E-24 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 SCD_RS11130 3bceeb8463036b6274ab2c5942083d97 588 ProSitePatterns PS00080 Multicopper oxidases signature 2. 570 581 - T 22-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 SCD_RS11130 3bceeb8463036b6274ab2c5942083d97 588 SUPERFAMILY SSF49503 180 394 4.65E-52 T 22-04-2016 IPR008972 Cupredoxin SCD_RS11130 3bceeb8463036b6274ab2c5942083d97 588 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 11 587 7.7E-286 T 22-04-2016 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 SCD_RS11130 3bceeb8463036b6274ab2c5942083d97 588 PANTHER PTHR11709 259 371 1.0E-98 T 22-04-2016 SCD_RS11130 3bceeb8463036b6274ab2c5942083d97 588 PANTHER PTHR11709 438 587 1.0E-98 T 22-04-2016 SCD_RS11130 3bceeb8463036b6274ab2c5942083d97 588 PANTHER PTHR11709 59 215 1.0E-98 T 22-04-2016 SCD_RS11130 3bceeb8463036b6274ab2c5942083d97 588 Gene3D G3DSA:2.60.40.420 182 382 1.1E-46 T 22-04-2016 IPR008972 Cupredoxin SCD_RS11130 3bceeb8463036b6274ab2c5942083d97 588 SUPERFAMILY SSF49503 58 204 4.92E-41 T 22-04-2016 IPR008972 Cupredoxin SCD_RS11130 3bceeb8463036b6274ab2c5942083d97 588 PANTHER PTHR11709:SF33 259 371 1.0E-98 T 22-04-2016 SCD_RS11130 3bceeb8463036b6274ab2c5942083d97 588 PANTHER PTHR11709:SF33 438 587 1.0E-98 T 22-04-2016 SCD_RS11130 3bceeb8463036b6274ab2c5942083d97 588 PANTHER PTHR11709:SF33 59 215 1.0E-98 T 22-04-2016 SCD_RS11130 3bceeb8463036b6274ab2c5942083d97 588 Pfam PF07732 Multicopper oxidase 64 173 1.7E-40 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 SCD_RS11130 3bceeb8463036b6274ab2c5942083d97 588 SUPERFAMILY SSF49503 427 587 4.18E-35 T 22-04-2016 IPR008972 Cupredoxin SCD_RS00285 42890067458460140a3a1e1eaa9870c0 418 PANTHER PTHR11063 4 417 2.0E-179 T 22-04-2016 SCD_RS00285 42890067458460140a3a1e1eaa9870c0 418 Gene3D G3DSA:3.40.309.10 228 375 1.1E-44 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SCD_RS00285 42890067458460140a3a1e1eaa9870c0 418 SUPERFAMILY SSF53720 6 417 1.7E-119 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SCD_RS00285 42890067458460140a3a1e1eaa9870c0 418 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 324 345 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SCD_RS00285 42890067458460140a3a1e1eaa9870c0 418 PIRSF PIRSF000151 1 418 1.0E-178 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SCD_RS00285 42890067458460140a3a1e1eaa9870c0 418 PANTHER PTHR11063:SF8 4 417 2.0E-179 T 22-04-2016 SCD_RS00285 42890067458460140a3a1e1eaa9870c0 418 Gene3D G3DSA:3.40.605.10 376 417 1.9E-100 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SCD_RS00285 42890067458460140a3a1e1eaa9870c0 418 Gene3D G3DSA:3.40.605.10 3 225 1.9E-100 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SCD_RS00285 42890067458460140a3a1e1eaa9870c0 418 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 14 407 1.4E-149 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SCD_RS00285 42890067458460140a3a1e1eaa9870c0 418 Pfam PF00171 Aldehyde dehydrogenase family 10 275 1.2E-15 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SCD_RS00285 42890067458460140a3a1e1eaa9870c0 418 Pfam PF00171 Aldehyde dehydrogenase family 309 374 7.3E-10 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SCD_RS00285 42890067458460140a3a1e1eaa9870c0 418 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 6 417 42.134 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SCD_RS08325 8b37b46948db06f39862447a3477a276 442 PANTHER PTHR30163 1 426 2.0E-123 T 22-04-2016 IPR011757 Lytic transglycosylase MltB SCD_RS08325 8b37b46948db06f39862447a3477a276 442 Pfam PF01471 Putative peptidoglycan binding domain 382 430 4.1E-12 T 22-04-2016 IPR002477 Peptidoglycan binding-like SCD_RS08325 8b37b46948db06f39862447a3477a276 442 Gene3D G3DSA:1.10.530.10 247 364 4.1E-50 T 22-04-2016 SCD_RS08325 8b37b46948db06f39862447a3477a276 442 Gene3D G3DSA:1.10.530.10 109 166 4.1E-50 T 22-04-2016 SCD_RS08325 8b37b46948db06f39862447a3477a276 442 SUPERFAMILY SSF47090 367 434 3.14E-15 T 22-04-2016 IPR002477 Peptidoglycan binding-like SCD_RS08325 8b37b46948db06f39862447a3477a276 442 PANTHER PTHR30163:SF2 1 426 2.0E-123 T 22-04-2016 SCD_RS08325 8b37b46948db06f39862447a3477a276 442 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 65 363 1.7E-98 T 22-04-2016 IPR011970 Lytic murein transglycosylase SCD_RS08325 8b37b46948db06f39862447a3477a276 442 Gene3D G3DSA:1.10.101.10 382 435 4.1E-15 T 22-04-2016 IPR002477 Peptidoglycan binding-like SCD_RS08325 8b37b46948db06f39862447a3477a276 442 Pfam PF13406 Transglycosylase SLT domain 65 359 3.5E-95 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 SCD_RS08325 8b37b46948db06f39862447a3477a276 442 SUPERFAMILY SSF53955 62 364 2.47E-88 T 22-04-2016 IPR023346 Lysozyme-like domain SCD_RS07675 7f92b686ebc492d4d0286d1eb4f3df50 671 Gene3D G3DSA:3.30.2060.10 164 235 4.5E-11 T 22-04-2016 SCD_RS07675 7f92b686ebc492d4d0286d1eb4f3df50 671 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 10 665 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SCD_RS07675 7f92b686ebc492d4d0286d1eb4f3df50 671 SUPERFAMILY SSF52540 9 419 2.41E-134 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07675 7f92b686ebc492d4d0286d1eb4f3df50 671 Gene3D G3DSA:4.10.860.10 628 669 1.9E-14 T 22-04-2016 IPR001943 UVR domain GO:0005515 SCD_RS07675 7f92b686ebc492d4d0286d1eb4f3df50 671 SMART SM00487 14 430 2.1E-27 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SCD_RS07675 7f92b686ebc492d4d0286d1eb4f3df50 671 SMART SM00490 464 550 6.7E-19 T 22-04-2016 IPR001650 Helicase, C-terminal SCD_RS07675 7f92b686ebc492d4d0286d1eb4f3df50 671 PANTHER PTHR24029 4 668 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SCD_RS07675 7f92b686ebc492d4d0286d1eb4f3df50 671 Pfam PF12344 Ultra-violet resistance protein B 556 598 2.2E-20 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain SCD_RS07675 7f92b686ebc492d4d0286d1eb4f3df50 671 Gene3D G3DSA:3.40.50.300 423 581 3.7E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07675 7f92b686ebc492d4d0286d1eb4f3df50 671 SUPERFAMILY SSF52540 42 87 6.69E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07675 7f92b686ebc492d4d0286d1eb4f3df50 671 SUPERFAMILY SSF52540 463 584 6.69E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07675 7f92b686ebc492d4d0286d1eb4f3df50 671 Pfam PF00271 Helicase conserved C-terminal domain 440 548 7.6E-18 T 22-04-2016 IPR001650 Helicase, C-terminal SCD_RS07675 7f92b686ebc492d4d0286d1eb4f3df50 671 Hamap MF_00204 UvrABC system protein B [uvrB]. 8 667 43.416 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SCD_RS07675 7f92b686ebc492d4d0286d1eb4f3df50 671 Pfam PF02151 UvrB/uvrC motif 633 666 1.3E-9 T 22-04-2016 IPR001943 UVR domain GO:0005515 SCD_RS07675 7f92b686ebc492d4d0286d1eb4f3df50 671 Gene3D G3DSA:3.40.50.300 12 94 5.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07675 7f92b686ebc492d4d0286d1eb4f3df50 671 Gene3D G3DSA:3.40.50.300 393 414 5.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07675 7f92b686ebc492d4d0286d1eb4f3df50 671 Gene3D G3DSA:3.40.50.300 283 343 5.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07675 7f92b686ebc492d4d0286d1eb4f3df50 671 Pfam PF04851 Type III restriction enzyme, res subunit 21 144 3.2E-8 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SCD_RS07675 7f92b686ebc492d4d0286d1eb4f3df50 671 SUPERFAMILY SSF46600 623 670 1.57E-10 T 22-04-2016 IPR001943 UVR domain GO:0005515 SCD_RS08010 7277c2f7e765904769e162a94f117a48 320 Gene3D G3DSA:3.30.1330.60 167 275 4.4E-15 T 22-04-2016 IPR006665 OmpA-like domain SCD_RS08010 7277c2f7e765904769e162a94f117a48 320 PANTHER PTHR30329:SF2 1 299 6.5E-111 T 22-04-2016 SCD_RS08010 7277c2f7e765904769e162a94f117a48 320 PANTHER PTHR30329 1 299 6.5E-111 T 22-04-2016 SCD_RS08010 7277c2f7e765904769e162a94f117a48 320 Pfam PF00691 OmpA family 171 264 1.6E-10 T 22-04-2016 IPR006665 OmpA-like domain SCD_RS08010 7277c2f7e765904769e162a94f117a48 320 SUPERFAMILY SSF103088 169 275 3.14E-18 T 22-04-2016 IPR006665 OmpA-like domain SCD_RS08010 7277c2f7e765904769e162a94f117a48 320 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 15 65 7.6E-18 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain SCD_RS15705 c7055d385dd4573cae56826aa1af2451 284 SMART SM00267 113 282 1.1E-46 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15705 c7055d385dd4573cae56826aa1af2451 284 PANTHER PTHR10799 157 277 1.1E-28 T 22-04-2016 SCD_RS15705 c7055d385dd4573cae56826aa1af2451 284 PANTHER PTHR10799 1 123 1.1E-28 T 22-04-2016 SCD_RS15705 c7055d385dd4573cae56826aa1af2451 284 PANTHER PTHR10799:SF774 157 277 1.1E-28 T 22-04-2016 SCD_RS15705 c7055d385dd4573cae56826aa1af2451 284 PANTHER PTHR10799:SF774 1 123 1.1E-28 T 22-04-2016 SCD_RS15705 c7055d385dd4573cae56826aa1af2451 284 Gene3D G3DSA:1.20.120.620 24 76 4.6E-4 T 22-04-2016 SCD_RS15705 c7055d385dd4573cae56826aa1af2451 284 Pfam PF00990 Diguanylate cyclase, GGDEF domain 124 277 2.9E-42 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15705 c7055d385dd4573cae56826aa1af2451 284 SUPERFAMILY SSF55073 129 279 4.32E-47 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS15705 c7055d385dd4573cae56826aa1af2451 284 Pfam PF13493 Domain of unknown function (DUF4118) 24 126 4.3E-7 T 22-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain SCD_RS15705 c7055d385dd4573cae56826aa1af2451 284 Gene3D G3DSA:3.30.70.270 126 280 5.8E-50 T 22-04-2016 SCD_RS15705 c7055d385dd4573cae56826aa1af2451 284 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 122 280 2.6E-47 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15845 c05f74cbc224f7ea313034a42d6238f4 327 Pfam PF11306 Protein of unknown function (DUF3108) 95 316 7.3E-35 T 22-04-2016 IPR021457 Protein of unknown function DUF3108 SCD_RS09330 511c421301ad41369d1f714d3d9cdd3a 182 Pfam PF00719 Inorganic pyrophosphatase 18 174 7.2E-54 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SCD_RS09330 511c421301ad41369d1f714d3d9cdd3a 182 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.712 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SCD_RS09330 511c421301ad41369d1f714d3d9cdd3a 182 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SCD_RS09330 511c421301ad41369d1f714d3d9cdd3a 182 SUPERFAMILY SSF50324 4 175 1.7E-67 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SCD_RS09330 511c421301ad41369d1f714d3d9cdd3a 182 Gene3D G3DSA:3.90.80.10 5 175 5.1E-59 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SCD_RS09330 511c421301ad41369d1f714d3d9cdd3a 182 PANTHER PTHR10286 6 175 2.2E-70 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SCD_RS14545 112014278b82778d96f51524cbd1af0b 201 SUPERFAMILY SSF81301 80 126 9.35E-6 T 22-04-2016 SCD_RS14545 112014278b82778d96f51524cbd1af0b 201 Gene3D G3DSA:3.30.460.10 77 136 1.3E-4 T 22-04-2016 SCD_RS14160 7fa41b33de603eb6921a6737094efb3d 589 SMART SM00382 367 554 5.0E-21 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS14160 7fa41b33de603eb6921a6737094efb3d 589 Gene3D G3DSA:1.20.1560.10 14 328 5.1E-78 T 22-04-2016 SCD_RS14160 7fa41b33de603eb6921a6737094efb3d 589 SUPERFAMILY SSF52540 331 579 8.1E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14160 7fa41b33de603eb6921a6737094efb3d 589 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 581 1.6E-241 T 22-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 SCD_RS14160 7fa41b33de603eb6921a6737094efb3d 589 SUPERFAMILY SSF90123 14 327 4.84E-79 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SCD_RS14160 7fa41b33de603eb6921a6737094efb3d 589 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS14160 7fa41b33de603eb6921a6737094efb3d 589 Pfam PF00664 ABC transporter transmembrane region 27 297 1.0E-52 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SCD_RS14160 7fa41b33de603eb6921a6737094efb3d 589 Pfam PF00005 ABC transporter 358 508 1.2E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS14160 7fa41b33de603eb6921a6737094efb3d 589 Gene3D G3DSA:3.40.50.300 341 572 5.0E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14160 7fa41b33de603eb6921a6737094efb3d 589 PANTHER PTHR24221 5 587 1.8E-237 T 22-04-2016 SCD_RS10395 ff9474495a85d0937bf1ca0dddd1e3b4 459 PANTHER PTHR32071 1 459 1.7E-209 T 22-04-2016 SCD_RS10395 ff9474495a85d0937bf1ca0dddd1e3b4 459 Gene3D G3DSA:3.40.50.300 154 326 4.9E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS10395 ff9474495a85d0937bf1ca0dddd1e3b4 459 Pfam PF02954 Bacterial regulatory protein, Fis family 416 456 2.5E-15 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS10395 ff9474495a85d0937bf1ca0dddd1e3b4 459 Gene3D G3DSA:1.10.10.60 411 455 3.0E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS10395 ff9474495a85d0937bf1ca0dddd1e3b4 459 SMART SM00382 174 317 2.7E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS10395 ff9474495a85d0937bf1ca0dddd1e3b4 459 SUPERFAMILY SSF46689 367 459 2.82E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS10395 ff9474495a85d0937bf1ca0dddd1e3b4 459 PANTHER PTHR32071:SF28 1 459 1.7E-209 T 22-04-2016 SCD_RS10395 ff9474495a85d0937bf1ca0dddd1e3b4 459 Pfam PF00158 Sigma-54 interaction domain 154 320 9.1E-66 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SCD_RS10395 ff9474495a85d0937bf1ca0dddd1e3b4 459 Gene3D G3DSA:3.40.50.2300 15 142 3.8E-34 T 22-04-2016 SCD_RS10395 ff9474495a85d0937bf1ca0dddd1e3b4 459 SMART SM00448 16 127 9.5E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS10395 ff9474495a85d0937bf1ca0dddd1e3b4 459 SUPERFAMILY SSF52540 155 395 2.74E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS10395 ff9474495a85d0937bf1ca0dddd1e3b4 459 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SCD_RS10395 ff9474495a85d0937bf1ca0dddd1e3b4 459 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 439 459 3.2E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS10395 ff9474495a85d0937bf1ca0dddd1e3b4 459 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 422 439 3.2E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS10395 ff9474495a85d0937bf1ca0dddd1e3b4 459 Pfam PF00072 Response regulator receiver domain 18 127 3.8E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS10395 ff9474495a85d0937bf1ca0dddd1e3b4 459 Gene3D G3DSA:1.10.8.60 327 402 8.1E-19 T 22-04-2016 SCD_RS10395 ff9474495a85d0937bf1ca0dddd1e3b4 459 SUPERFAMILY SSF52172 14 196 2.42E-41 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS09620 3a206254e33006559a23846b4d2a7bd6 892 Gene3D G3DSA:3.40.50.261 290 444 1.0E-21 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SCD_RS09620 3a206254e33006559a23846b4d2a7bd6 892 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 155 292 9.0E-57 T 22-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain SCD_RS09620 3a206254e33006559a23846b4d2a7bd6 892 PANTHER PTHR11117 17 708 1.5E-291 T 22-04-2016 SCD_RS09620 3a206254e33006559a23846b4d2a7bd6 892 Pfam PF13380 CoA binding domain 13 138 3.6E-23 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SCD_RS09620 3a206254e33006559a23846b4d2a7bd6 892 Gene3D G3DSA:3.40.630.30 731 882 2.7E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS09620 3a206254e33006559a23846b4d2a7bd6 892 SUPERFAMILY SSF52210 300 455 1.7E-45 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SCD_RS09620 3a206254e33006559a23846b4d2a7bd6 892 SUPERFAMILY SSF55729 734 879 2.62E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS09620 3a206254e33006559a23846b4d2a7bd6 892 Gene3D G3DSA:3.40.50.720 4 135 5.1E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS09620 3a206254e33006559a23846b4d2a7bd6 892 SUPERFAMILY SSF52210 133 295 4.06E-48 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SCD_RS09620 3a206254e33006559a23846b4d2a7bd6 892 Pfam PF13302 Acetyltransferase (GNAT) domain 737 874 5.2E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SCD_RS09620 3a206254e33006559a23846b4d2a7bd6 892 PANTHER PTHR11117:SF8 17 708 1.5E-291 T 22-04-2016 SCD_RS09620 3a206254e33006559a23846b4d2a7bd6 892 SMART SM00881 9 104 1.8E-36 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SCD_RS09620 3a206254e33006559a23846b4d2a7bd6 892 Pfam PF13549 ATP-grasp domain 482 703 9.6E-85 T 22-04-2016 SCD_RS09620 3a206254e33006559a23846b4d2a7bd6 892 SUPERFAMILY SSF56059 488 704 2.05E-40 T 22-04-2016 SCD_RS09620 3a206254e33006559a23846b4d2a7bd6 892 Gene3D G3DSA:3.40.50.261 136 289 1.7E-36 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SCD_RS09620 3a206254e33006559a23846b4d2a7bd6 892 SUPERFAMILY SSF51735 2 143 3.18E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS04465 63ee41b73c880a621adb4d012ad41e35 560 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 32 557 1.5E-232 T 22-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 SCD_RS04465 63ee41b73c880a621adb4d012ad41e35 560 SUPERFAMILY SSF50715 343 554 1.1E-67 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 SCD_RS04465 63ee41b73c880a621adb4d012ad41e35 560 Gene3D G3DSA:2.40.240.10 351 464 9.0E-44 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 SCD_RS04465 63ee41b73c880a621adb4d012ad41e35 560 PANTHER PTHR11451:SF29 14 250 1.6E-214 T 22-04-2016 SCD_RS04465 63ee41b73c880a621adb4d012ad41e35 560 PANTHER PTHR11451:SF29 270 559 1.6E-214 T 22-04-2016 SCD_RS04465 63ee41b73c880a621adb4d012ad41e35 560 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 37 48 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS04465 63ee41b73c880a621adb4d012ad41e35 560 Gene3D G3DSA:2.40.240.10 465 553 4.8E-31 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 SCD_RS04465 63ee41b73c880a621adb4d012ad41e35 560 PANTHER PTHR11451 14 250 1.6E-214 T 22-04-2016 SCD_RS04465 63ee41b73c880a621adb4d012ad41e35 560 PANTHER PTHR11451 270 559 1.6E-214 T 22-04-2016 SCD_RS04465 63ee41b73c880a621adb4d012ad41e35 560 Gene3D G3DSA:1.10.1160.10 265 340 4.3E-35 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 SCD_RS04465 63ee41b73c880a621adb4d012ad41e35 560 Gene3D G3DSA:3.40.50.620 215 264 7.6E-44 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS04465 63ee41b73c880a621adb4d012ad41e35 560 Gene3D G3DSA:3.40.50.620 31 99 7.6E-44 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS04465 63ee41b73c880a621adb4d012ad41e35 560 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 344 533 5.6E-58 T 22-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 SCD_RS04465 63ee41b73c880a621adb4d012ad41e35 560 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 555 54.157 T 22-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 SCD_RS04465 63ee41b73c880a621adb4d012ad41e35 560 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 31 339 2.9E-109 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 SCD_RS04465 63ee41b73c880a621adb4d012ad41e35 560 Gene3D G3DSA:3.90.800.10 104 212 1.9E-44 T 22-04-2016 SCD_RS04465 63ee41b73c880a621adb4d012ad41e35 560 PRINTS PR00987 Glutamyl-tRNA synthetase signature 34 46 3.4E-8 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SCD_RS04465 63ee41b73c880a621adb4d012ad41e35 560 PRINTS PR00987 Glutamyl-tRNA synthetase signature 63 76 3.4E-8 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SCD_RS04465 63ee41b73c880a621adb4d012ad41e35 560 PRINTS PR00987 Glutamyl-tRNA synthetase signature 213 223 3.4E-8 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SCD_RS04465 63ee41b73c880a621adb4d012ad41e35 560 SUPERFAMILY SSF52374 14 338 9.38E-99 T 22-04-2016 SCD_RS05510 39da5b875e79c8cf2b3b56acf883ae87 339 Gene3D G3DSA:3.30.930.10 9 339 6.3E-130 T 22-04-2016 SCD_RS05510 39da5b875e79c8cf2b3b56acf883ae87 339 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 6.3E-22 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SCD_RS05510 39da5b875e79c8cf2b3b56acf883ae87 339 Pfam PF01409 tRNA synthetases class II core domain (F) 92 338 2.2E-105 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 SCD_RS05510 39da5b875e79c8cf2b3b56acf883ae87 339 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 338 1.2E-102 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SCD_RS05510 39da5b875e79c8cf2b3b56acf883ae87 339 SUPERFAMILY SSF55681 92 339 5.53E-81 T 22-04-2016 SCD_RS05510 39da5b875e79c8cf2b3b56acf883ae87 339 SUPERFAMILY SSF46589 14 99 4.18E-21 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SCD_RS05510 39da5b875e79c8cf2b3b56acf883ae87 339 PANTHER PTHR11538 92 338 1.9E-106 T 22-04-2016 SCD_RS05510 39da5b875e79c8cf2b3b56acf883ae87 339 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 338 49.592 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 SCD_RS11735 a276dfe11cd74339ce3a0282bccfdaf4 93 Pfam PF13744 Helix-turn-helix domain 13 89 5.3E-23 T 22-04-2016 SCD_RS11735 a276dfe11cd74339ce3a0282bccfdaf4 93 SUPERFAMILY SSF47413 18 89 1.41E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SCD_RS11735 a276dfe11cd74339ce3a0282bccfdaf4 93 Gene3D G3DSA:1.10.260.40 18 82 6.7E-29 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SCD_RS11570 01b1b323a74101e7ac72a48e0711ef66 592 SUPERFAMILY SSF90123 10 340 4.32E-51 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SCD_RS11570 01b1b323a74101e7ac72a48e0711ef66 592 SUPERFAMILY SSF52540 354 588 5.75E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11570 01b1b323a74101e7ac72a48e0711ef66 592 PANTHER PTHR24221:SF233 75 590 1.2E-292 T 22-04-2016 SCD_RS11570 01b1b323a74101e7ac72a48e0711ef66 592 PANTHER PTHR24221:SF233 6 57 1.2E-292 T 22-04-2016 SCD_RS11570 01b1b323a74101e7ac72a48e0711ef66 592 SMART SM00382 381 582 2.4E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS11570 01b1b323a74101e7ac72a48e0711ef66 592 PANTHER PTHR24221 75 590 1.2E-292 T 22-04-2016 SCD_RS11570 01b1b323a74101e7ac72a48e0711ef66 592 PANTHER PTHR24221 6 57 1.2E-292 T 22-04-2016 SCD_RS11570 01b1b323a74101e7ac72a48e0711ef66 592 Gene3D G3DSA:3.40.50.300 357 589 6.5E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11570 01b1b323a74101e7ac72a48e0711ef66 592 Gene3D G3DSA:1.20.1560.10 10 340 2.1E-48 T 22-04-2016 SCD_RS11570 01b1b323a74101e7ac72a48e0711ef66 592 Pfam PF00005 ABC transporter 372 520 6.4E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS11570 01b1b323a74101e7ac72a48e0711ef66 592 ProSitePatterns PS00211 ABC transporters family signature. 492 506 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS11570 01b1b323a74101e7ac72a48e0711ef66 592 Pfam PF00664 ABC transporter transmembrane region 56 310 8.7E-26 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SCD_RS14135 fc1b3cfdd881767f108676a9ac049492 103 PANTHER PTHR34981 4 102 5.9E-18 T 22-04-2016 SCD_RS14135 fc1b3cfdd881767f108676a9ac049492 103 SUPERFAMILY SSF102829 9 97 2.22E-22 T 22-04-2016 IPR007838 Cell division protein ZapA-like SCD_RS14135 fc1b3cfdd881767f108676a9ac049492 103 PANTHER PTHR34981:SF1 4 102 5.9E-18 T 22-04-2016 SCD_RS14135 fc1b3cfdd881767f108676a9ac049492 103 Pfam PF05164 Cell division protein ZapA 9 92 1.2E-21 T 22-04-2016 IPR007838 Cell division protein ZapA-like SCD_RS02505 8135c9636e6d3e348eccd173aba1c878 206 SUPERFAMILY SSF161111 20 201 1.96E-35 T 22-04-2016 SCD_RS02505 8135c9636e6d3e348eccd173aba1c878 206 Pfam PF01545 Cation efflux family 23 201 9.9E-15 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SCD_RS02505 8135c9636e6d3e348eccd173aba1c878 206 Gene3D G3DSA:1.20.1510.10 21 201 2.1E-25 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain SCD_RS02505 8135c9636e6d3e348eccd173aba1c878 206 PANTHER PTHR11562 21 201 1.9E-20 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SCD_RS01670 de63c015fd29edef75e27f6fceca1609 389 PANTHER PTHR11751:SF422 4 383 9.3E-133 T 22-04-2016 SCD_RS01670 de63c015fd29edef75e27f6fceca1609 389 SUPERFAMILY SSF53383 19 383 9.25E-99 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS01670 de63c015fd29edef75e27f6fceca1609 389 PANTHER PTHR11751 4 383 9.3E-133 T 22-04-2016 SCD_RS01670 de63c015fd29edef75e27f6fceca1609 389 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 386 1.3E-162 T 22-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 SCD_RS01670 de63c015fd29edef75e27f6fceca1609 389 Pfam PF00155 Aminotransferase class I and II 32 370 1.0E-34 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SCD_RS01670 de63c015fd29edef75e27f6fceca1609 389 Gene3D G3DSA:3.40.640.10 44 254 1.6E-50 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS01670 de63c015fd29edef75e27f6fceca1609 389 Gene3D G3DSA:3.90.1150.10 255 385 7.0E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS09610 1586d941b6b6add70f30efcebf93f4e2 250 Gene3D G3DSA:3.30.450.40 8 169 3.2E-28 T 22-04-2016 IPR029016 GAF domain-like SCD_RS09610 1586d941b6b6add70f30efcebf93f4e2 250 SMART SM00065 23 173 3.2E-16 T 22-04-2016 IPR003018 GAF domain GO:0005515 SCD_RS09610 1586d941b6b6add70f30efcebf93f4e2 250 Pfam PF13185 GAF domain 35 163 3.5E-14 T 22-04-2016 IPR003018 GAF domain GO:0005515 SCD_RS09610 1586d941b6b6add70f30efcebf93f4e2 250 SUPERFAMILY SSF55781 8 178 9.16E-29 T 22-04-2016 IPR029016 GAF domain-like SCD_RS13750 3801ca2d9e2ab1118338f0c551b82417 167 Pfam PF08534 Redoxin 28 162 4.3E-25 T 22-04-2016 IPR013740 Redoxin GO:0016491 SCD_RS13750 3801ca2d9e2ab1118338f0c551b82417 167 PANTHER PTHR10681 3 166 1.6E-48 T 22-04-2016 SCD_RS13750 3801ca2d9e2ab1118338f0c551b82417 167 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 166 37.31 T 22-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 SCD_RS13750 3801ca2d9e2ab1118338f0c551b82417 167 SUPERFAMILY SSF52833 1 163 7.3E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS13750 3801ca2d9e2ab1118338f0c551b82417 167 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 22-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 SCD_RS13750 3801ca2d9e2ab1118338f0c551b82417 167 PANTHER PTHR10681:SF81 3 166 1.6E-48 T 22-04-2016 SCD_RS13750 3801ca2d9e2ab1118338f0c551b82417 167 Gene3D G3DSA:3.40.30.10 2 166 7.6E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS11910 22eb44bb2ee5e2956392abb8cc769fcd 104 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 6 102 2.0E-38 T 22-04-2016 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ SCD_RS11910 22eb44bb2ee5e2956392abb8cc769fcd 104 Gene3D G3DSA:2.60.40.10 5 103 6.4E-33 T 22-04-2016 IPR013783 Immunoglobulin-like fold SCD_RS11910 22eb44bb2ee5e2956392abb8cc769fcd 104 SUPERFAMILY SSF81296 2 103 1.54E-27 T 22-04-2016 IPR014756 Immunoglobulin E-set SCD_RS11910 22eb44bb2ee5e2956392abb8cc769fcd 104 Pfam PF08770 Sulphur oxidation protein SoxZ 7 100 1.3E-35 T 22-04-2016 IPR014880 Sulphur oxidation protein SoxZ SCD_RS14880 f0325a629e616de72d545845914e6ebd 289 SUPERFAMILY SSF55729 82 249 1.23E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS14880 f0325a629e616de72d545845914e6ebd 289 Gene3D G3DSA:3.40.630.30 83 245 3.4E-8 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS03765 e75c374a1bbbe7496466cf989335c48a 213 PANTHER PTHR34229 2 209 8.2E-40 T 22-04-2016 SCD_RS03765 e75c374a1bbbe7496466cf989335c48a 213 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 210 1.9E-46 T 22-04-2016 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 UniPathway: UPA00148 SCD_RS03765 e75c374a1bbbe7496466cf989335c48a 213 PANTHER PTHR34229:SF1 2 209 8.2E-40 T 22-04-2016 SCD_RS11445 fb9881b8aae04307981831819edd5f86 129 SUPERFAMILY SSF55174 6 102 7.72E-27 T 22-04-2016 SCD_RS11445 fb9881b8aae04307981831819edd5f86 129 SMART SM00363 8 65 9.4E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS11445 fb9881b8aae04307981831819edd5f86 129 PANTHER PTHR11079 1 59 8.6E-18 T 22-04-2016 SCD_RS11445 fb9881b8aae04307981831819edd5f86 129 Pfam PF01479 S4 domain 9 53 9.1E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS11445 fb9881b8aae04307981831819edd5f86 129 Gene3D G3DSA:3.10.290.10 6 97 4.5E-32 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS11445 fb9881b8aae04307981831819edd5f86 129 PANTHER PTHR11079:SF70 1 59 8.6E-18 T 22-04-2016 SCD_RS11445 fb9881b8aae04307981831819edd5f86 129 PIRSF PIRSF016821 5 129 7.6E-41 T 22-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 SCD_RS14665 a840ab31a53ebe9ba26559580fcd1457 458 PANTHER PTHR36932:SF2 1 451 6.7E-61 T 22-04-2016 SCD_RS14665 a840ab31a53ebe9ba26559580fcd1457 458 Gene3D G3DSA:3.40.50.980 185 261 2.2E-5 T 22-04-2016 SCD_RS14665 a840ab31a53ebe9ba26559580fcd1457 458 PANTHER PTHR36932 1 451 6.7E-61 T 22-04-2016 SCD_RS14665 a840ab31a53ebe9ba26559580fcd1457 458 Pfam PF00501 AMP-binding enzyme 188 308 3.6E-6 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SCD_RS14665 a840ab31a53ebe9ba26559580fcd1457 458 SUPERFAMILY SSF56801 60 393 1.11E-22 T 22-04-2016 SCD_RS15540 21734afd506ee7dbef641499742a177e 935 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 503 661 7.0E-37 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15540 21734afd506ee7dbef641499742a177e 935 Gene3D G3DSA:3.30.70.270 505 669 5.9E-55 T 22-04-2016 SCD_RS15540 21734afd506ee7dbef641499742a177e 935 SUPERFAMILY SSF55785 383 490 4.19E-28 T 22-04-2016 IPR000014 PAS domain SCD_RS15540 21734afd506ee7dbef641499742a177e 935 SUPERFAMILY SSF103190 69 186 8.63E-13 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SCD_RS15540 21734afd506ee7dbef641499742a177e 935 SMART SM00052 674 920 2.3E-141 T 22-04-2016 IPR001633 EAL domain SCD_RS15540 21734afd506ee7dbef641499742a177e 935 Pfam PF00563 EAL domain 680 915 6.5E-78 T 22-04-2016 IPR001633 EAL domain SCD_RS15540 21734afd506ee7dbef641499742a177e 935 Gene3D G3DSA:3.20.20.450 677 927 2.1E-111 T 22-04-2016 IPR001633 EAL domain SCD_RS15540 21734afd506ee7dbef641499742a177e 935 Pfam PF14827 Double sensory domain of two-component sensor kinase 43 291 3.9E-12 T 22-04-2016 IPR029150 Double Cache domain 3 SCD_RS15540 21734afd506ee7dbef641499742a177e 935 SMART SM00267 491 664 5.8E-58 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15540 21734afd506ee7dbef641499742a177e 935 Gene3D G3DSA:3.30.450.20 364 486 1.1E-28 T 22-04-2016 SCD_RS15540 21734afd506ee7dbef641499742a177e 935 Pfam PF00990 Diguanylate cyclase, GGDEF domain 503 659 4.2E-47 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15540 21734afd506ee7dbef641499742a177e 935 SMART SM00086 450 492 7.7E-6 T 22-04-2016 IPR001610 PAC motif SCD_RS15540 21734afd506ee7dbef641499742a177e 935 SUPERFAMILY SSF141868 679 927 4.71E-100 T 22-04-2016 IPR001633 EAL domain SCD_RS15540 21734afd506ee7dbef641499742a177e 935 SMART SM00091 378 444 1.1E-7 T 22-04-2016 IPR000014 PAS domain SCD_RS15540 21734afd506ee7dbef641499742a177e 935 SUPERFAMILY SSF55073 509 665 2.51E-48 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS15540 21734afd506ee7dbef641499742a177e 935 Pfam PF13426 PAS domain 389 491 9.3E-16 T 22-04-2016 IPR000014 PAS domain SCD_RS15540 21734afd506ee7dbef641499742a177e 935 PANTHER PTHR10799:SF774 915 934 1.9E-91 T 22-04-2016 SCD_RS15540 21734afd506ee7dbef641499742a177e 935 PANTHER PTHR10799:SF774 536 754 1.9E-91 T 22-04-2016 SCD_RS15540 21734afd506ee7dbef641499742a177e 935 PANTHER PTHR10799:SF774 160 237 1.9E-91 T 22-04-2016 SCD_RS15540 21734afd506ee7dbef641499742a177e 935 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 382 498 1.3E-20 T 22-04-2016 IPR000014 PAS domain SCD_RS15540 21734afd506ee7dbef641499742a177e 935 PANTHER PTHR10799 915 934 1.9E-91 T 22-04-2016 SCD_RS15540 21734afd506ee7dbef641499742a177e 935 PANTHER PTHR10799 536 754 1.9E-91 T 22-04-2016 SCD_RS15540 21734afd506ee7dbef641499742a177e 935 PANTHER PTHR10799 160 237 1.9E-91 T 22-04-2016 SCD_RS00375 60e8216dce7150301af62281a5a02ded 554 PANTHER PTHR24096 3 552 4.6E-155 T 22-04-2016 SCD_RS00375 60e8216dce7150301af62281a5a02ded 554 Gene3D G3DSA:2.30.38.10 372 429 6.5E-20 T 22-04-2016 SCD_RS00375 60e8216dce7150301af62281a5a02ded 554 SUPERFAMILY SSF56801 313 548 1.7E-108 T 22-04-2016 SCD_RS00375 60e8216dce7150301af62281a5a02ded 554 SUPERFAMILY SSF56801 15 268 1.7E-108 T 22-04-2016 SCD_RS00375 60e8216dce7150301af62281a5a02ded 554 ProSitePatterns PS00455 Putative AMP-binding domain signature. 165 176 - T 22-04-2016 IPR020845 AMP-binding, conserved site SCD_RS00375 60e8216dce7150301af62281a5a02ded 554 Gene3D G3DSA:3.40.50.980 172 263 3.5E-32 T 22-04-2016 SCD_RS00375 60e8216dce7150301af62281a5a02ded 554 Gene3D G3DSA:3.40.50.980 310 371 3.5E-32 T 22-04-2016 SCD_RS00375 60e8216dce7150301af62281a5a02ded 554 Pfam PF00501 AMP-binding enzyme 21 442 4.7E-89 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SCD_RS00375 60e8216dce7150301af62281a5a02ded 554 Gene3D G3DSA:3.40.50.980 27 171 4.7E-28 T 22-04-2016 SCD_RS00375 60e8216dce7150301af62281a5a02ded 554 PANTHER PTHR24096:SF193 3 552 4.6E-155 T 22-04-2016 SCD_RS00205 65d592d2c5267c72358301796ea0ad16 333 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 SCD_RS00205 65d592d2c5267c72358301796ea0ad16 333 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 50.272 T 22-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 SCD_RS00205 65d592d2c5267c72358301796ea0ad16 333 Gene3D G3DSA:3.20.20.70 8 244 1.3E-85 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS00205 65d592d2c5267c72358301796ea0ad16 333 PANTHER PTHR11082 1 319 1.8E-139 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SCD_RS00205 65d592d2c5267c72358301796ea0ad16 333 PIRSF PIRSF006621 1 327 8.2E-109 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SCD_RS00205 65d592d2c5267c72358301796ea0ad16 333 Pfam PF01207 Dihydrouridine synthase (Dus) 14 316 1.8E-110 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SCD_RS00205 65d592d2c5267c72358301796ea0ad16 333 Gene3D G3DSA:1.10.1200.80 253 320 4.0E-23 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 SCD_RS00205 65d592d2c5267c72358301796ea0ad16 333 SUPERFAMILY SSF51395 12 319 4.03E-90 T 22-04-2016 SCD_RS00205 65d592d2c5267c72358301796ea0ad16 333 PANTHER PTHR11082:SF25 1 319 1.8E-139 T 22-04-2016 SCD_RS00205 65d592d2c5267c72358301796ea0ad16 333 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 318 5.6E-130 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 SCD_RS06750 f6628bb6173312d19e5d0b1b55919e24 72 SUPERFAMILY SSF55174 3 69 2.22E-19 T 22-04-2016 SCD_RS06750 f6628bb6173312d19e5d0b1b55919e24 72 Gene3D G3DSA:3.10.290.10 1 70 1.1E-25 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS06750 f6628bb6173312d19e5d0b1b55919e24 72 PANTHER PTHR32319 8 70 7.1E-18 T 22-04-2016 SCD_RS06750 f6628bb6173312d19e5d0b1b55919e24 72 Pfam PF13275 S4 domain 6 69 3.3E-23 T 22-04-2016 SCD_RS02905 408f364f3e45aac6e428cddb18567f48 217 SUPERFAMILY SSF53850 4 212 2.17E-66 T 22-04-2016 SCD_RS02905 408f364f3e45aac6e428cddb18567f48 217 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 3 213 56.399 T 22-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SCD_RS02905 408f364f3e45aac6e428cddb18567f48 217 PANTHER PTHR21403:SF3 4 212 2.6E-84 T 22-04-2016 SCD_RS02905 408f364f3e45aac6e428cddb18567f48 217 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 148 169 - T 22-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SCD_RS02905 408f364f3e45aac6e428cddb18567f48 217 Pfam PF01634 ATP phosphoribosyltransferase 53 206 4.0E-52 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SCD_RS02905 408f364f3e45aac6e428cddb18567f48 217 PANTHER PTHR21403 4 212 2.6E-84 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SCD_RS02905 408f364f3e45aac6e428cddb18567f48 217 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 4 189 2.3E-60 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SCD_RS02905 408f364f3e45aac6e428cddb18567f48 217 Gene3D G3DSA:3.40.190.10 4 147 2.7E-44 T 22-04-2016 SCD_RS10105 2f6680c3234d12e252843f16e4daeeb3 212 Gene3D G3DSA:3.40.1050.10 2 209 1.6E-69 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SCD_RS10105 2f6680c3234d12e252843f16e4daeeb3 212 PANTHER PTHR11002 4 198 6.4E-74 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SCD_RS10105 2f6680c3234d12e252843f16e4daeeb3 212 Pfam PF00484 Carbonic anhydrase 38 198 2.2E-48 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SCD_RS10105 2f6680c3234d12e252843f16e4daeeb3 212 SUPERFAMILY SSF53056 4 210 5.63E-63 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SCD_RS10105 2f6680c3234d12e252843f16e4daeeb3 212 PANTHER PTHR11002:SF7 4 198 6.4E-74 T 22-04-2016 SCD_RS10105 2f6680c3234d12e252843f16e4daeeb3 212 SMART SM00947 31 202 2.1E-61 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SCD_RS08685 a4cd997d4b22663274a8dc732730e4d7 347 Gene3D G3DSA:3.40.50.720 1 239 1.2E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS08685 a4cd997d4b22663274a8dc732730e4d7 347 SUPERFAMILY SSF51735 2 337 4.92E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS08685 a4cd997d4b22663274a8dc732730e4d7 347 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 252 3.1E-48 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SCD_RS08685 a4cd997d4b22663274a8dc732730e4d7 347 PANTHER PTHR10366 3 329 6.6E-113 T 22-04-2016 SCD_RS08685 a4cd997d4b22663274a8dc732730e4d7 347 PANTHER PTHR10366:SF253 3 329 6.6E-113 T 22-04-2016 SCD_RS08685 a4cd997d4b22663274a8dc732730e4d7 347 Gene3D G3DSA:3.90.25.10 256 326 1.7E-37 T 22-04-2016 SCD_RS07570 9724eddff883f728f127fe01cc12bba8 270 SUPERFAMILY SSF56752 1 265 9.03E-68 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SCD_RS07570 9724eddff883f728f127fe01cc12bba8 270 Gene3D G3DSA:3.30.470.10 1 107 3.5E-25 T 22-04-2016 SCD_RS07570 9724eddff883f728f127fe01cc12bba8 270 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 263 9.6E-83 T 22-04-2016 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543|UniPathway: UPA00077 SCD_RS07570 9724eddff883f728f127fe01cc12bba8 270 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 SCD_RS07570 9724eddff883f728f127fe01cc12bba8 270 PANTHER PTHR11825 16 247 3.9E-62 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SCD_RS07570 9724eddff883f728f127fe01cc12bba8 270 Gene3D G3DSA:3.20.10.10 122 264 4.4E-44 T 22-04-2016 SCD_RS07570 9724eddff883f728f127fe01cc12bba8 270 PANTHER PTHR11825:SF55 16 247 3.9E-62 T 22-04-2016 SCD_RS07570 9724eddff883f728f127fe01cc12bba8 270 Pfam PF01063 Amino-transferase class IV 24 246 4.5E-42 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SCD_RS13820 a8edded23d878873df446674d4205d40 342 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 81 1.2E-13 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SCD_RS13820 a8edded23d878873df446674d4205d40 342 SUPERFAMILY SSF63380 102 199 5.55E-25 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SCD_RS13820 a8edded23d878873df446674d4205d40 342 SUPERFAMILY SSF54292 3 93 8.0E-26 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SCD_RS13820 a8edded23d878873df446674d4205d40 342 Gene3D G3DSA:3.10.20.30 2 97 9.1E-30 T 22-04-2016 IPR012675 Beta-grasp domain SCD_RS13820 a8edded23d878873df446674d4205d40 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 300 308 6.6E-22 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SCD_RS13820 a8edded23d878873df446674d4205d40 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 192 201 6.6E-22 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SCD_RS13820 a8edded23d878873df446674d4205d40 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 148 155 6.6E-22 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SCD_RS13820 a8edded23d878873df446674d4205d40 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 233 242 6.6E-22 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SCD_RS13820 a8edded23d878873df446674d4205d40 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 6.6E-22 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SCD_RS13820 a8edded23d878873df446674d4205d40 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 208 227 6.6E-22 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SCD_RS13820 a8edded23d878873df446674d4205d40 342 Gene3D G3DSA:2.40.30.10 102 199 3.4E-29 T 22-04-2016 SCD_RS13820 a8edded23d878873df446674d4205d40 342 Gene3D G3DSA:3.40.50.80 201 335 5.0E-40 T 22-04-2016 SCD_RS13820 a8edded23d878873df446674d4205d40 342 Pfam PF00175 Oxidoreductase NAD-binding domain 209 314 2.8E-20 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SCD_RS13820 a8edded23d878873df446674d4205d40 342 PANTHER PTHR19370 33 333 2.1E-68 T 22-04-2016 SCD_RS13820 a8edded23d878873df446674d4205d40 342 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SCD_RS13820 a8edded23d878873df446674d4205d40 342 PANTHER PTHR19370:SF68 33 333 2.1E-68 T 22-04-2016 SCD_RS13820 a8edded23d878873df446674d4205d40 342 Pfam PF00970 Oxidoreductase FAD-binding domain 105 197 1.0E-16 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain SCD_RS13820 a8edded23d878873df446674d4205d40 342 SUPERFAMILY SSF52343 200 335 1.7E-39 T 22-04-2016 SCD_RS06505 3672b1e66f77f25a7c2d669f8addfc55 68 Gene3D G3DSA:1.25.40.10 4 40 4.3E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS05125 5ae3dea97646c1416b8177e893695408 93 Gene3D G3DSA:4.10.520.10 1 91 8.9E-34 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SCD_RS05125 5ae3dea97646c1416b8177e893695408 93 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 93 29.157 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 SCD_RS05125 5ae3dea97646c1416b8177e893695408 93 PANTHER PTHR33175:SF5 1 93 4.4E-45 T 22-04-2016 SCD_RS05125 5ae3dea97646c1416b8177e893695408 93 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.3E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS05125 5ae3dea97646c1416b8177e893695408 93 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.3E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS05125 5ae3dea97646c1416b8177e893695408 93 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.3E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS05125 5ae3dea97646c1416b8177e893695408 93 SUPERFAMILY SSF47729 1 91 3.53E-29 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SCD_RS05125 5ae3dea97646c1416b8177e893695408 93 SMART SM00411 1 91 9.8E-41 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS05125 5ae3dea97646c1416b8177e893695408 93 Pfam PF00216 Bacterial DNA-binding protein 1 90 6.1E-29 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS05125 5ae3dea97646c1416b8177e893695408 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SCD_RS05125 5ae3dea97646c1416b8177e893695408 93 PANTHER PTHR33175 1 93 4.4E-45 T 22-04-2016 SCD_RS05125 5ae3dea97646c1416b8177e893695408 93 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 3.2E-41 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 SCD_RS13615 c229f68162226f76601d687da26e25e2 338 SUPERFAMILY SSF55298 198 330 2.67E-14 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SCD_RS13615 c229f68162226f76601d687da26e25e2 338 Pfam PF01042 Endoribonuclease L-PSP 225 330 5.4E-7 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family SCD_RS13615 c229f68162226f76601d687da26e25e2 338 Gene3D G3DSA:3.30.1330.40 197 330 5.4E-13 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SCD_RS05595 da9b13cd40d23e978c9738bd73ebbecf 467 SUPERFAMILY SSF53686 1 466 5.76E-158 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SCD_RS05595 da9b13cd40d23e978c9738bd73ebbecf 467 Pfam PF14821 Threonine synthase N terminus 2 79 1.4E-26 T 22-04-2016 IPR029144 Threonine synthase, N-terminal SCD_RS05595 da9b13cd40d23e978c9738bd73ebbecf 467 Gene3D G3DSA:3.90.1380.10 1 82 3.1E-28 T 22-04-2016 IPR029144 Threonine synthase, N-terminal SCD_RS05595 da9b13cd40d23e978c9738bd73ebbecf 467 TIGRFAM TIGR00260 thrC: threonine synthase 78 426 1.2E-75 T 22-04-2016 IPR004450 Threonine synthase-like SCD_RS05595 da9b13cd40d23e978c9738bd73ebbecf 467 PANTHER PTHR10314 53 332 1.5E-127 T 22-04-2016 SCD_RS05595 da9b13cd40d23e978c9738bd73ebbecf 467 PANTHER PTHR10314 25 36 1.5E-127 T 22-04-2016 SCD_RS05595 da9b13cd40d23e978c9738bd73ebbecf 467 PANTHER PTHR10314 366 466 1.5E-127 T 22-04-2016 SCD_RS05595 da9b13cd40d23e978c9738bd73ebbecf 467 PANTHER PTHR10314:SF1 53 332 1.5E-127 T 22-04-2016 SCD_RS05595 da9b13cd40d23e978c9738bd73ebbecf 467 PANTHER PTHR10314:SF1 25 36 1.5E-127 T 22-04-2016 SCD_RS05595 da9b13cd40d23e978c9738bd73ebbecf 467 PANTHER PTHR10314:SF1 366 466 1.5E-127 T 22-04-2016 SCD_RS05595 da9b13cd40d23e978c9738bd73ebbecf 467 Gene3D G3DSA:3.40.50.1100 112 203 6.6E-8 T 22-04-2016 SCD_RS05595 da9b13cd40d23e978c9738bd73ebbecf 467 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 105 326 1.6E-9 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SCD_RS05595 da9b13cd40d23e978c9738bd73ebbecf 467 Gene3D G3DSA:3.40.50.1100 204 438 6.2E-93 T 22-04-2016 SCD_RS11490 9bff5757bb60d41986604cdf3d50972e 243 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 143 242 6.5E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS11490 9bff5757bb60d41986604cdf3d50972e 243 PANTHER PTHR24423 25 243 1.4E-15 T 22-04-2016 SCD_RS11490 9bff5757bb60d41986604cdf3d50972e 243 SUPERFAMILY SSF55874 80 243 3.14E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS11490 9bff5757bb60d41986604cdf3d50972e 243 Gene3D G3DSA:3.30.565.10 101 243 1.9E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS11490 9bff5757bb60d41986604cdf3d50972e 243 PRINTS PR00344 Bacterial sensor protein C-terminal signature 200 218 5.0E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS11490 9bff5757bb60d41986604cdf3d50972e 243 PRINTS PR00344 Bacterial sensor protein C-terminal signature 170 184 5.0E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS11490 9bff5757bb60d41986604cdf3d50972e 243 PRINTS PR00344 Bacterial sensor protein C-terminal signature 230 243 5.0E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS14095 4537f26a3d7bd338022079d1b81e95af 459 Gene3D G3DSA:3.30.70.150 6 134 6.6E-45 T 22-04-2016 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 SCD_RS14095 4537f26a3d7bd338022079d1b81e95af 459 Gene3D G3DSA:3.20.20.110 137 438 7.2E-110 T 22-04-2016 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 SCD_RS14095 4537f26a3d7bd338022079d1b81e95af 459 PANTHER PTHR23321:SF19 14 444 8.0E-43 T 22-04-2016 SCD_RS14095 4537f26a3d7bd338022079d1b81e95af 459 Hamap MF_01339 Ribulose bisphosphate carboxylase [cbbM]. 1 459 76.828 T 22-04-2016 IPR020871 Ribulose bisphosphate carboxylase GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 SCD_RS14095 4537f26a3d7bd338022079d1b81e95af 459 PANTHER PTHR23321 14 444 8.0E-43 T 22-04-2016 SCD_RS14095 4537f26a3d7bd338022079d1b81e95af 459 SUPERFAMILY SSF54966 2 137 4.71E-48 T 22-04-2016 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 SCD_RS14095 4537f26a3d7bd338022079d1b81e95af 459 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 12 131 2.1E-38 T 22-04-2016 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 SCD_RS14095 4537f26a3d7bd338022079d1b81e95af 459 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 143 440 6.4E-113 T 22-04-2016 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 SCD_RS14095 4537f26a3d7bd338022079d1b81e95af 459 SUPERFAMILY SSF51649 138 455 9.03E-111 T 22-04-2016 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 SCD_RS14095 4537f26a3d7bd338022079d1b81e95af 459 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 186 194 - T 22-04-2016 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 SCD_RS06860 19bcd169fa45ea8a4529013ad129b026 616 SMART SM00487 15 213 8.3E-25 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SCD_RS06860 19bcd169fa45ea8a4529013ad129b026 616 Gene3D G3DSA:1.10.10.10 343 517 2.3E-61 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS06860 19bcd169fa45ea8a4529013ad129b026 616 Gene3D G3DSA:3.40.50.300 204 342 5.4E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06860 19bcd169fa45ea8a4529013ad129b026 616 Pfam PF00270 DEAD/DEAH box helicase 21 182 2.4E-18 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SCD_RS06860 19bcd169fa45ea8a4529013ad129b026 616 Gene3D G3DSA:3.40.50.300 4 203 2.0E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06860 19bcd169fa45ea8a4529013ad129b026 616 Pfam PF09382 RQC domain 406 517 4.2E-40 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 SCD_RS06860 19bcd169fa45ea8a4529013ad129b026 616 PANTHER PTHR13710 6 607 2.1E-285 T 22-04-2016 SCD_RS06860 19bcd169fa45ea8a4529013ad129b026 616 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 461 3.5E-153 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 SCD_RS06860 19bcd169fa45ea8a4529013ad129b026 616 SUPERFAMILY SSF47819 538 608 4.36E-21 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 SCD_RS06860 19bcd169fa45ea8a4529013ad129b026 616 Pfam PF00271 Helicase conserved C-terminal domain 222 329 3.6E-15 T 22-04-2016 IPR001650 Helicase, C-terminal SCD_RS06860 19bcd169fa45ea8a4529013ad129b026 616 SMART SM00341 536 616 3.1E-15 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SCD_RS06860 19bcd169fa45ea8a4529013ad129b026 616 Gene3D G3DSA:1.10.150.80 540 607 1.1E-16 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SCD_RS06860 19bcd169fa45ea8a4529013ad129b026 616 SMART SM00956 410 513 2.0E-53 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 SCD_RS06860 19bcd169fa45ea8a4529013ad129b026 616 SUPERFAMILY SSF52540 205 455 6.05E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06860 19bcd169fa45ea8a4529013ad129b026 616 SUPERFAMILY SSF52540 4 193 4.67E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06860 19bcd169fa45ea8a4529013ad129b026 616 Pfam PF00570 HRDC domain 541 606 7.2E-23 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SCD_RS06860 19bcd169fa45ea8a4529013ad129b026 616 SMART SM00490 248 329 1.7E-25 T 22-04-2016 IPR001650 Helicase, C-terminal SCD_RS06860 19bcd169fa45ea8a4529013ad129b026 616 PANTHER PTHR13710:SF81 6 607 2.1E-285 T 22-04-2016 SCD_RS06860 19bcd169fa45ea8a4529013ad129b026 616 Pfam PF16124 RecQ zinc-binding 341 403 3.0E-19 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain SCD_RS06860 19bcd169fa45ea8a4529013ad129b026 616 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 6 607 6.3E-248 T 22-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 SCD_RS14535 1cc00ffa76ed3609c747c31c58301ecf 337 PIRSF PIRSF001415 1 334 7.7E-147 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS14535 1cc00ffa76ed3609c747c31c58301ecf 337 Gene3D G3DSA:3.20.20.70 6 333 4.8E-148 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS14535 1cc00ffa76ed3609c747c31c58301ecf 337 SMART SM01004 7 331 4.5E-237 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS14535 1cc00ffa76ed3609c747c31c58301ecf 337 Pfam PF00490 Delta-aminolevulinic acid dehydratase 10 330 2.6E-138 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS14535 1cc00ffa76ed3609c747c31c58301ecf 337 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 250 262 - T 22-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS14535 1cc00ffa76ed3609c747c31c58301ecf 337 PANTHER PTHR11458 7 337 1.3E-181 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS14535 1cc00ffa76ed3609c747c31c58301ecf 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 196 215 2.1E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS14535 1cc00ffa76ed3609c747c31c58301ecf 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 127 141 2.1E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS14535 1cc00ffa76ed3609c747c31c58301ecf 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 158 177 2.1E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS14535 1cc00ffa76ed3609c747c31c58301ecf 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 305 324 2.1E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS14535 1cc00ffa76ed3609c747c31c58301ecf 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 250 266 2.1E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS14535 1cc00ffa76ed3609c747c31c58301ecf 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 275 290 2.1E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS14535 1cc00ffa76ed3609c747c31c58301ecf 337 SUPERFAMILY SSF51569 6 332 6.89E-143 T 22-04-2016 SCD_RS14320 7d610a7bd4de4f6a9ee680d3df6ec79d 453 Gene3D G3DSA:3.90.1300.10 9 433 4.6E-86 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SCD_RS14320 7d610a7bd4de4f6a9ee680d3df6ec79d 453 PANTHER PTHR11895 5 445 4.5E-68 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SCD_RS14320 7d610a7bd4de4f6a9ee680d3df6ec79d 453 SUPERFAMILY SSF75304 6 432 2.49E-82 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SCD_RS14320 7d610a7bd4de4f6a9ee680d3df6ec79d 453 Pfam PF01425 Amidase 27 430 1.3E-57 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SCD_RS11755 02cedc7dd9df4759089e5ce57c62974d 176 Gene3D G3DSA:3.30.1060.10 3 152 2.4E-67 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SCD_RS11755 02cedc7dd9df4759089e5ce57c62974d 176 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 5 157 35.185 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SCD_RS11755 02cedc7dd9df4759089e5ce57c62974d 176 Pfam PF01625 Peptide methionine sulfoxide reductase 7 152 4.3E-59 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SCD_RS11755 02cedc7dd9df4759089e5ce57c62974d 176 SUPERFAMILY SSF55068 2 163 8.76E-70 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SCD_RS11755 02cedc7dd9df4759089e5ce57c62974d 176 PANTHER PTHR10173 3 153 2.0E-74 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SCD_RS11755 02cedc7dd9df4759089e5ce57c62974d 176 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 6 145 1.7E-54 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SCD_RS11755 02cedc7dd9df4759089e5ce57c62974d 176 PANTHER PTHR10173:SF34 3 153 2.0E-74 T 22-04-2016 SCD_RS12160 f009bae0b5dfe4c5c1199914a07b9be4 159 Gene3D G3DSA:2.40.30.60 1 85 4.1E-27 T 22-04-2016 IPR002676 RimM protein GO:0006364 SCD_RS12160 f009bae0b5dfe4c5c1199914a07b9be4 159 PANTHER PTHR33692 2 158 1.3E-49 T 22-04-2016 SCD_RS12160 f009bae0b5dfe4c5c1199914a07b9be4 159 Gene3D G3DSA:2.30.30.240 91 159 2.7E-28 T 22-04-2016 SCD_RS12160 f009bae0b5dfe4c5c1199914a07b9be4 159 PANTHER PTHR33692:SF1 2 158 1.3E-49 T 22-04-2016 SCD_RS12160 f009bae0b5dfe4c5c1199914a07b9be4 159 Pfam PF05239 PRC-barrel domain 88 154 2.4E-9 T 22-04-2016 IPR027275 PRC-barrel domain SCD_RS12160 f009bae0b5dfe4c5c1199914a07b9be4 159 SUPERFAMILY SSF50346 91 158 1.26E-20 T 22-04-2016 IPR011033 PRC-barrel-like SCD_RS12160 f009bae0b5dfe4c5c1199914a07b9be4 159 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 1 159 21.925 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SCD_RS12160 f009bae0b5dfe4c5c1199914a07b9be4 159 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 1 158 1.1E-50 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SCD_RS12160 f009bae0b5dfe4c5c1199914a07b9be4 159 SUPERFAMILY SSF50447 1 85 1.17E-19 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SCD_RS12160 f009bae0b5dfe4c5c1199914a07b9be4 159 Pfam PF01782 RimM N-terminal domain 1 82 1.4E-23 T 22-04-2016 IPR002676 RimM protein GO:0006364 SCD_RS13835 f0ea60548e5304136a11a98bda10e69c 353 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 31 342 7.8E-63 T 22-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX SCD_RS13835 f0ea60548e5304136a11a98bda10e69c 353 PANTHER PTHR38043 1 341 5.1E-34 T 22-04-2016 SCD_RS10920 fbb3c1e93ae941fd8d564f2fae785f20 605 Pfam PF13721 SecD export protein N-terminal TM region 1 103 2.9E-38 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain SCD_RS10920 fbb3c1e93ae941fd8d564f2fae785f20 605 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 590 1.5E-144 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 SCD_RS10920 fbb3c1e93ae941fd8d564f2fae785f20 605 PANTHER PTHR30081:SF1 316 599 3.4E-177 T 22-04-2016 SCD_RS10920 fbb3c1e93ae941fd8d564f2fae785f20 605 PANTHER PTHR30081:SF1 226 284 3.4E-177 T 22-04-2016 SCD_RS10920 fbb3c1e93ae941fd8d564f2fae785f20 605 PANTHER PTHR30081:SF1 1 173 3.4E-177 T 22-04-2016 SCD_RS10920 fbb3c1e93ae941fd8d564f2fae785f20 605 PANTHER PTHR30081 316 599 3.4E-177 T 22-04-2016 SCD_RS10920 fbb3c1e93ae941fd8d564f2fae785f20 605 PANTHER PTHR30081 226 284 3.4E-177 T 22-04-2016 SCD_RS10920 fbb3c1e93ae941fd8d564f2fae785f20 605 PANTHER PTHR30081 1 173 3.4E-177 T 22-04-2016 SCD_RS10920 fbb3c1e93ae941fd8d564f2fae785f20 605 Pfam PF07549 SecD/SecF GG Motif 115 139 1.9E-6 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site SCD_RS10920 fbb3c1e93ae941fd8d564f2fae785f20 605 Gene3D G3DSA:1.20.1640.10 437 595 1.4E-22 T 22-04-2016 SCD_RS10920 fbb3c1e93ae941fd8d564f2fae785f20 605 Pfam PF02355 Protein export membrane protein 423 591 5.8E-18 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SCD_RS10920 fbb3c1e93ae941fd8d564f2fae785f20 605 SUPERFAMILY SSF82866 400 597 2.09E-39 T 22-04-2016 SCD_RS10920 fbb3c1e93ae941fd8d564f2fae785f20 605 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 349 583 1.0E-73 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SCD_RS10920 fbb3c1e93ae941fd8d564f2fae785f20 605 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 604 47.566 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 SCD_RS14755 d48577e77715ea4e019c4f8debe27701 610 SUPERFAMILY SSF69318 2 184 1.29E-25 T 22-04-2016 SCD_RS14755 d48577e77715ea4e019c4f8debe27701 610 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 424 492 6.4E-10 T 22-04-2016 SCD_RS14755 d48577e77715ea4e019c4f8debe27701 610 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 9 72 5.3E-14 T 22-04-2016 SCD_RS14755 d48577e77715ea4e019c4f8debe27701 610 Pfam PF07593 ASPIC and UnbV 537 603 2.0E-19 T 22-04-2016 IPR011519 ASPIC/UnbV SCD_RS14755 d48577e77715ea4e019c4f8debe27701 610 SUPERFAMILY SSF69318 408 537 2.75E-22 T 22-04-2016 SCD_RS14755 d48577e77715ea4e019c4f8debe27701 610 SUPERFAMILY SSF69318 165 273 2.75E-22 T 22-04-2016 SCD_RS14755 d48577e77715ea4e019c4f8debe27701 610 PANTHER PTHR16026:SF0 420 605 2.4E-31 T 22-04-2016 SCD_RS14755 d48577e77715ea4e019c4f8debe27701 610 PANTHER PTHR16026 420 605 2.4E-31 T 22-04-2016 IPR027039 Cartilage acidic protein 1 SCD_RS14755 d48577e77715ea4e019c4f8debe27701 610 Gene3D G3DSA:2.130.10.130 2 152 1.8E-15 T 22-04-2016 SCD_RS14755 d48577e77715ea4e019c4f8debe27701 610 Gene3D G3DSA:2.130.10.130 415 520 3.3E-11 T 22-04-2016 SCD_RS14755 d48577e77715ea4e019c4f8debe27701 610 Gene3D G3DSA:2.130.10.130 229 271 3.3E-11 T 22-04-2016 SCD_RS14755 d48577e77715ea4e019c4f8debe27701 610 Gene3D G3DSA:2.130.10.130 191 228 1.8E-15 T 22-04-2016 SCD_RS08070 345912a09470d136b840221b301d401e 273 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 224 250 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 SCD_RS08070 345912a09470d136b840221b301d401e 273 Pfam PF01148 Cytidylyltransferase family 3 261 6.5E-54 T 22-04-2016 SCD_RS08070 345912a09470d136b840221b301d401e 273 PANTHER PTHR13773:SF0 1 261 2.4E-47 T 22-04-2016 SCD_RS08070 345912a09470d136b840221b301d401e 273 PANTHER PTHR13773 1 261 2.4E-47 T 22-04-2016 SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 SMART SM00065 411 563 2.9E-10 T 22-04-2016 IPR003018 GAF domain GO:0005515 SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 Gene3D G3DSA:3.30.450.20 269 405 4.3E-16 T 22-04-2016 SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 567 683 4.6E-16 T 22-04-2016 IPR000014 PAS domain SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 PANTHER PTHR10799:SF774 562 940 1.6E-93 T 22-04-2016 SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 PANTHER PTHR10799:SF774 1070 1089 1.6E-93 T 22-04-2016 SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 SUPERFAMILY SSF55781 386 555 5.67E-25 T 22-04-2016 IPR029016 GAF domain-like SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 SMART SM00267 677 850 3.0E-61 T 22-04-2016 IPR000160 GGDEF domain SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 Pfam PF08447 PAS fold 303 372 4.2E-11 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 SUPERFAMILY SSF52172 136 276 5.83E-22 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 SMART SM00448 3 118 2.5E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 SMART SM00448 136 256 1.8E-10 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 SMART SM00052 860 1106 3.9E-134 T 22-04-2016 IPR001633 EAL domain SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 SMART SM00091 563 629 4.1E-6 T 22-04-2016 IPR000014 PAS domain SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 SMART SM00091 277 347 0.14 T 22-04-2016 IPR000014 PAS domain SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 SUPERFAMILY SSF55785 568 675 1.74E-25 T 22-04-2016 IPR000014 PAS domain SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 PANTHER PTHR10799 562 940 1.6E-93 T 22-04-2016 SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 PANTHER PTHR10799 1070 1089 1.6E-93 T 22-04-2016 SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 SUPERFAMILY SSF55073 693 852 7.22E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 Gene3D G3DSA:3.40.50.2300 136 268 6.5E-21 T 22-04-2016 SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 Pfam PF00563 EAL domain 866 1101 7.8E-76 T 22-04-2016 IPR001633 EAL domain SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 685 848 3.4E-41 T 22-04-2016 IPR000160 GGDEF domain SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 SUPERFAMILY SSF55785 264 380 5.32E-11 T 22-04-2016 IPR000014 PAS domain SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 Gene3D G3DSA:3.30.450.20 573 675 1.3E-24 T 22-04-2016 SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 Gene3D G3DSA:3.30.450.40 406 567 1.3E-18 T 22-04-2016 IPR029016 GAF domain-like SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 Pfam PF00072 Response regulator receiver domain 165 245 2.9E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 Pfam PF00072 Response regulator receiver domain 5 108 2.8E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 SUPERFAMILY SSF141868 866 1113 2.48E-95 T 22-04-2016 IPR001633 EAL domain SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 Gene3D G3DSA:3.20.20.450 863 1112 1.4E-107 T 22-04-2016 IPR001633 EAL domain SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 Gene3D G3DSA:3.30.70.270 690 854 3.2E-54 T 22-04-2016 SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 Pfam PF13426 PAS domain 574 676 5.9E-12 T 22-04-2016 IPR000014 PAS domain SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 SUPERFAMILY SSF52172 3 128 9.53E-27 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 Pfam PF00990 Diguanylate cyclase, GGDEF domain 689 846 2.4E-45 T 22-04-2016 IPR000160 GGDEF domain SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 Gene3D G3DSA:3.40.50.2300 2 123 1.9E-26 T 22-04-2016 SCD_RS05695 39457fd260fff2d35e130ee435c0c718 1119 Pfam PF13185 GAF domain 415 554 2.2E-15 T 22-04-2016 IPR003018 GAF domain GO:0005515 SCD_RS06530 7885c07631b0972d84fa56a9689e6e4d 404 PANTHER PTHR30012:SF6 2 404 6.4E-160 T 22-04-2016 SCD_RS06530 7885c07631b0972d84fa56a9689e6e4d 404 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 403 6.2E-156 T 22-04-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 SCD_RS06530 7885c07631b0972d84fa56a9689e6e4d 404 PANTHER PTHR30012 2 404 6.4E-160 T 22-04-2016 SCD_RS06530 7885c07631b0972d84fa56a9689e6e4d 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 2.9E-31 T 22-04-2016 IPR003004 GspF/PilC family SCD_RS06530 7885c07631b0972d84fa56a9689e6e4d 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 2.9E-31 T 22-04-2016 IPR003004 GspF/PilC family SCD_RS06530 7885c07631b0972d84fa56a9689e6e4d 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 2.9E-31 T 22-04-2016 IPR003004 GspF/PilC family SCD_RS06530 7885c07631b0972d84fa56a9689e6e4d 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 2.9E-31 T 22-04-2016 IPR003004 GspF/PilC family SCD_RS06530 7885c07631b0972d84fa56a9689e6e4d 404 Pfam PF00482 Type II secretion system (T2SS), protein F 71 193 1.0E-33 T 22-04-2016 IPR018076 Type II secretion system F domain SCD_RS06530 7885c07631b0972d84fa56a9689e6e4d 404 Pfam PF00482 Type II secretion system (T2SS), protein F 275 395 1.5E-27 T 22-04-2016 IPR018076 Type II secretion system F domain SCD_RS12395 a577d8dceb5b0a94debaefcdbfbe6c2d 240 SUPERFAMILY SSF53067 114 237 1.04E-27 T 22-04-2016 SCD_RS12395 a577d8dceb5b0a94debaefcdbfbe6c2d 240 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 3 236 2.3E-30 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SCD_RS12395 a577d8dceb5b0a94debaefcdbfbe6c2d 240 PANTHER PTHR34265 1 240 1.0E-34 T 22-04-2016 SCD_RS12395 a577d8dceb5b0a94debaefcdbfbe6c2d 240 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 240 17.914 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SCD_RS12395 a577d8dceb5b0a94debaefcdbfbe6c2d 240 Pfam PF03309 Type III pantothenate kinase 2 191 8.2E-52 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SCD_RS12395 a577d8dceb5b0a94debaefcdbfbe6c2d 240 Gene3D G3DSA:3.30.420.40 84 238 2.0E-41 T 22-04-2016 SCD_RS12395 a577d8dceb5b0a94debaefcdbfbe6c2d 240 SUPERFAMILY SSF53067 1 111 2.59E-27 T 22-04-2016 SCD_RS07990 54dc62fea0bb416d70da9be817429a10 256 Gene3D G3DSA:3.30.1330.30 3 103 1.5E-19 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SCD_RS07990 54dc62fea0bb416d70da9be817429a10 256 PANTHER PTHR12029 1 256 9.3E-52 T 22-04-2016 SCD_RS07990 54dc62fea0bb416d70da9be817429a10 256 Gene3D G3DSA:3.40.1280.10 109 255 4.2E-48 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SCD_RS07990 54dc62fea0bb416d70da9be817429a10 256 SUPERFAMILY SSF75217 108 255 5.56E-43 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SCD_RS07990 54dc62fea0bb416d70da9be817429a10 256 Pfam PF00588 SpoU rRNA Methylase family 113 248 1.9E-35 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SCD_RS07990 54dc62fea0bb416d70da9be817429a10 256 SUPERFAMILY SSF55315 2 104 2.21E-21 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SCD_RS05980 da9883333ebc9fefbc9aeed35786d1ee 590 Gene3D G3DSA:2.40.160.50 397 590 4.3E-16 T 22-04-2016 SCD_RS05980 da9883333ebc9fefbc9aeed35786d1ee 590 Pfam PF01103 Surface antigen 293 590 1.8E-33 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 SCD_RS05980 da9883333ebc9fefbc9aeed35786d1ee 590 Pfam PF07244 Surface antigen variable number repeat 210 281 9.0E-6 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 SCD_RS05980 da9883333ebc9fefbc9aeed35786d1ee 590 PANTHER PTHR12815:SF12 6 587 7.8E-79 T 22-04-2016 SCD_RS05980 da9883333ebc9fefbc9aeed35786d1ee 590 PANTHER PTHR12815 6 587 7.8E-79 T 22-04-2016 SCD_RS08485 eae57f5243ed2be2aa79091ac12294ce 302 SUPERFAMILY SSF55120 10 236 4.03E-78 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS08485 eae57f5243ed2be2aa79091ac12294ce 302 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 218 1.5E-76 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS08485 eae57f5243ed2be2aa79091ac12294ce 302 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 297 18.383 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS08485 eae57f5243ed2be2aa79091ac12294ce 302 PANTHER PTHR13767:SF2 4 297 8.5E-114 T 22-04-2016 SCD_RS08485 eae57f5243ed2be2aa79091ac12294ce 302 PANTHER PTHR13767 4 297 8.5E-114 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS08485 eae57f5243ed2be2aa79091ac12294ce 302 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 234 3.3E-14 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal SCD_RS08485 eae57f5243ed2be2aa79091ac12294ce 302 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 241 297 1.4E-16 T 22-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS08485 eae57f5243ed2be2aa79091ac12294ce 302 Gene3D G3DSA:2.30.130.10 240 300 7.8E-21 T 22-04-2016 IPR015947 PUA-like domain SCD_RS08485 eae57f5243ed2be2aa79091ac12294ce 302 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 1.7E-55 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 SCD_RS08485 eae57f5243ed2be2aa79091ac12294ce 302 SUPERFAMILY SSF88697 240 298 1.42E-12 T 22-04-2016 IPR015947 PUA-like domain SCD_RS10380 4f6f537f3c3fa9482ff64644a79b3973 126 Gene3D G3DSA:3.40.30.10 18 116 2.5E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS10380 4f6f537f3c3fa9482ff64644a79b3973 126 SUPERFAMILY SSF52833 10 123 1.69E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS10380 4f6f537f3c3fa9482ff64644a79b3973 126 Pfam PF00085 Thioredoxin 19 115 8.5E-9 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 SCD_RS03575 0851360c1d991dd2b8f01a970769af02 283 SMART SM00086 230 272 0.0019 T 22-04-2016 IPR001610 PAC motif SCD_RS03575 0851360c1d991dd2b8f01a970769af02 283 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 154 271 3.0E-8 T 22-04-2016 IPR000014 PAS domain SCD_RS03575 0851360c1d991dd2b8f01a970769af02 283 Gene3D G3DSA:3.40.50.2300 9 138 5.9E-31 T 22-04-2016 SCD_RS03575 0851360c1d991dd2b8f01a970769af02 283 Pfam PF00072 Response regulator receiver domain 12 122 1.0E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS03575 0851360c1d991dd2b8f01a970769af02 283 SMART SM00448 10 122 1.0E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS03575 0851360c1d991dd2b8f01a970769af02 283 SUPERFAMILY SSF52172 10 163 4.13E-35 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS03575 0851360c1d991dd2b8f01a970769af02 283 PANTHER PTHR26402 10 125 3.2E-28 T 22-04-2016 SCD_RS03575 0851360c1d991dd2b8f01a970769af02 283 SUPERFAMILY SSF55785 149 270 2.27E-14 T 22-04-2016 IPR000014 PAS domain SCD_RS03575 0851360c1d991dd2b8f01a970769af02 283 PANTHER PTHR26402:SF547 10 125 3.2E-28 T 22-04-2016 SCD_RS03575 0851360c1d991dd2b8f01a970769af02 283 Gene3D G3DSA:3.30.450.20 151 270 1.5E-14 T 22-04-2016 SCD_RS00580 b88d024e335caa2cc9cc9b3465acf3a2 370 Pfam PF14020 Protein of unknown function (DUF4236) 3 53 5.1E-17 T 22-04-2016 IPR025330 Domain of unknown function DUF4236 SCD_RS01115 04ba22ac81d5327c8687cedcb388f5ab 335 SMART SM00267 149 312 3.6E-40 T 22-04-2016 IPR000160 GGDEF domain SCD_RS01115 04ba22ac81d5327c8687cedcb388f5ab 335 PANTHER PTHR10799 193 306 3.6E-22 T 22-04-2016 SCD_RS01115 04ba22ac81d5327c8687cedcb388f5ab 335 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 157 311 9.3E-36 T 22-04-2016 IPR000160 GGDEF domain SCD_RS01115 04ba22ac81d5327c8687cedcb388f5ab 335 Gene3D G3DSA:3.30.70.270 161 311 3.2E-40 T 22-04-2016 SCD_RS01115 04ba22ac81d5327c8687cedcb388f5ab 335 PANTHER PTHR10799 95 105 3.6E-22 T 22-04-2016 SCD_RS01115 04ba22ac81d5327c8687cedcb388f5ab 335 PANTHER PTHR10799:SF750 193 306 3.6E-22 T 22-04-2016 SCD_RS01115 04ba22ac81d5327c8687cedcb388f5ab 335 PANTHER PTHR10799:SF750 95 105 3.6E-22 T 22-04-2016 SCD_RS01115 04ba22ac81d5327c8687cedcb388f5ab 335 SUPERFAMILY SSF55073 164 310 4.0E-36 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS01115 04ba22ac81d5327c8687cedcb388f5ab 335 Pfam PF00990 Diguanylate cyclase, GGDEF domain 159 307 4.1E-35 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15595 6b9cf02341fa2f3db45f13ee5acefb4b 382 PANTHER PTHR30408:SF2 55 211 5.4E-20 T 22-04-2016 SCD_RS15595 6b9cf02341fa2f3db45f13ee5acefb4b 382 PANTHER PTHR30408 55 211 5.4E-20 T 22-04-2016 SCD_RS15595 6b9cf02341fa2f3db45f13ee5acefb4b 382 SUPERFAMILY SSF116734 5 176 1.26E-29 T 22-04-2016 SCD_RS15595 6b9cf02341fa2f3db45f13ee5acefb4b 382 Pfam PF01420 Type I restriction modification DNA specificity domain 4 151 5.7E-16 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 SCD_RS15595 6b9cf02341fa2f3db45f13ee5acefb4b 382 SUPERFAMILY SSF116734 182 382 1.37E-23 T 22-04-2016 SCD_RS02355 41cdf82475d4d40c8ed86b7880cd9539 153 Pfam PF09626 Dihaem cytochrome c 31 138 5.0E-36 T 22-04-2016 IPR018588 Dihaem cytochrome c SCD_RS02355 41cdf82475d4d40c8ed86b7880cd9539 153 SUPERFAMILY SSF48695 25 46 4.19E-6 T 22-04-2016 IPR011031 Multihaem cytochrome SCD_RS02355 41cdf82475d4d40c8ed86b7880cd9539 153 SUPERFAMILY SSF48695 112 144 4.19E-6 T 22-04-2016 IPR011031 Multihaem cytochrome SCD_RS03515 8a760b0d3ae64a9b291afb7a4e83b0af 847 TIGRFAM TIGR02094 more_P_ylases: alpha-glucan phosphorylases 112 712 4.1E-243 T 22-04-2016 IPR011834 Alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SCD_RS03515 8a760b0d3ae64a9b291afb7a4e83b0af 847 Pfam PF11897 Protein of unknown function (DUF3417) 23 125 1.5E-25 T 22-04-2016 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SCD_RS03515 8a760b0d3ae64a9b291afb7a4e83b0af 847 Pfam PF00343 Carbohydrate phosphorylase 275 624 1.9E-24 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SCD_RS03515 8a760b0d3ae64a9b291afb7a4e83b0af 847 Pfam PF00343 Carbohydrate phosphorylase 129 173 1.6E-4 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SCD_RS03515 8a760b0d3ae64a9b291afb7a4e83b0af 847 PIRSF PIRSF000460 17 792 9.6E-243 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SCD_RS03515 8a760b0d3ae64a9b291afb7a4e83b0af 847 Gene3D G3DSA:3.40.50.2000 423 716 5.5E-76 T 22-04-2016 SCD_RS03515 8a760b0d3ae64a9b291afb7a4e83b0af 847 PANTHER PTHR11468:SF9 112 479 1.4E-220 T 22-04-2016 SCD_RS03515 8a760b0d3ae64a9b291afb7a4e83b0af 847 PANTHER PTHR11468:SF9 497 780 1.4E-220 T 22-04-2016 SCD_RS03515 8a760b0d3ae64a9b291afb7a4e83b0af 847 SUPERFAMILY SSF53756 20 736 1.94E-197 T 22-04-2016 SCD_RS03515 8a760b0d3ae64a9b291afb7a4e83b0af 847 PANTHER PTHR11468 112 479 1.4E-220 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SCD_RS03515 8a760b0d3ae64a9b291afb7a4e83b0af 847 PANTHER PTHR11468 497 780 1.4E-220 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SCD_RS03515 8a760b0d3ae64a9b291afb7a4e83b0af 847 Gene3D G3DSA:3.40.50.2000 31 422 1.5E-78 T 22-04-2016 SCD_RS01595 0adc8a700fc07d746b9ddd696d59bf59 433 PANTHER PTHR23512:SF1 12 430 7.0E-82 T 22-04-2016 SCD_RS01595 0adc8a700fc07d746b9ddd696d59bf59 433 Pfam PF07690 Major Facilitator Superfamily 21 272 2.5E-28 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SCD_RS01595 0adc8a700fc07d746b9ddd696d59bf59 433 Pfam PF07690 Major Facilitator Superfamily 273 421 7.7E-11 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SCD_RS01595 0adc8a700fc07d746b9ddd696d59bf59 433 Gene3D G3DSA:1.20.1250.20 12 205 2.2E-32 T 22-04-2016 SCD_RS01595 0adc8a700fc07d746b9ddd696d59bf59 433 SUPERFAMILY SSF103473 7 425 4.58E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain SCD_RS01595 0adc8a700fc07d746b9ddd696d59bf59 433 Gene3D G3DSA:1.20.1250.20 228 426 1.5E-19 T 22-04-2016 SCD_RS01595 0adc8a700fc07d746b9ddd696d59bf59 433 ProSitePatterns PS00216 Sugar transport proteins signature 1. 287 304 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SCD_RS01595 0adc8a700fc07d746b9ddd696d59bf59 433 PANTHER PTHR23512 12 430 7.0E-82 T 22-04-2016 SCD_RS04935 b6f9b232a5176faeef6afaa576158442 109 Gene3D G3DSA:1.10.10.370 40 106 1.9E-25 T 22-04-2016 SCD_RS04935 b6f9b232a5176faeef6afaa576158442 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 10 104 4.5E-31 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE SCD_RS04935 b6f9b232a5176faeef6afaa576158442 109 PIRSF PIRSF006223 4 107 2.1E-34 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE SCD_RS04935 b6f9b232a5176faeef6afaa576158442 109 PANTHER PTHR37010:SF1 10 103 7.0E-27 T 22-04-2016 SCD_RS04935 b6f9b232a5176faeef6afaa576158442 109 Pfam PF04358 DsrC like protein 10 105 1.6E-34 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE SCD_RS04935 b6f9b232a5176faeef6afaa576158442 109 SUPERFAMILY SSF69721 10 106 3.92E-33 T 22-04-2016 IPR025526 DsrC-like domain SCD_RS04935 b6f9b232a5176faeef6afaa576158442 109 PANTHER PTHR37010 10 103 7.0E-27 T 22-04-2016 SCD_RS04935 b6f9b232a5176faeef6afaa576158442 109 Gene3D G3DSA:3.30.1420.10 11 39 1.8E-8 T 22-04-2016 SCD_RS03980 5f168156937bb26c36eeb3b3fdce9784 146 PANTHER PTHR11715 4 115 6.4E-41 T 22-04-2016 IPR002930 Glycine cleavage system H-protein SCD_RS03980 5f168156937bb26c36eeb3b3fdce9784 146 Pfam PF01597 Glycine cleavage H-protein 13 132 4.9E-32 T 22-04-2016 IPR002930 Glycine cleavage system H-protein SCD_RS03980 5f168156937bb26c36eeb3b3fdce9784 146 SUPERFAMILY SSF51230 9 123 1.7E-29 T 22-04-2016 IPR011053 Single hybrid motif SCD_RS03980 5f168156937bb26c36eeb3b3fdce9784 146 Gene3D G3DSA:2.40.50.100 12 135 3.9E-29 T 22-04-2016 SCD_RS03980 5f168156937bb26c36eeb3b3fdce9784 146 PANTHER PTHR11715:SF13 4 115 6.4E-41 T 22-04-2016 SCD_RS03980 5f168156937bb26c36eeb3b3fdce9784 146 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 10 138 23.917 T 22-04-2016 IPR002930 Glycine cleavage system H-protein SCD_RS04770 0a4b841348e059ec8ddf25b6f45cc2b8 151 Pfam PF13676 TIR domain 4 107 3.8E-22 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 SCD_RS04770 0a4b841348e059ec8ddf25b6f45cc2b8 151 Gene3D G3DSA:3.40.50.10140 3 117 8.3E-15 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 SCD_RS04770 0a4b841348e059ec8ddf25b6f45cc2b8 151 SUPERFAMILY SSF52200 2 105 7.32E-20 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 SCD_RS04770 0a4b841348e059ec8ddf25b6f45cc2b8 151 SMART SM00255 1 131 0.0041 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 SCD_RS09515 29dbb31ea3d3fc0e06cd93811f650ba0 668 Pfam PF09095 Domain of unknown function (DUF1926) 404 661 1.6E-66 T 22-04-2016 IPR015179 Alpha-amylase/4-alpha-glucanotransferase, C-terminal GO:0003824|GO:0005975|GO:0030246 SCD_RS09515 29dbb31ea3d3fc0e06cd93811f650ba0 668 Pfam PF03065 Glycosyl hydrolase family 57 10 282 1.1E-37 T 22-04-2016 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 SCD_RS09515 29dbb31ea3d3fc0e06cd93811f650ba0 668 Gene3D G3DSA:2.70.98.10 402 656 1.4E-57 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SCD_RS09515 29dbb31ea3d3fc0e06cd93811f650ba0 668 Pfam PF09094 Domain of unknown function (DUF1925) 312 388 4.4E-38 T 22-04-2016 IPR015178 Alpha-amylase/4-alpha-glucanotransferase, central domain SCD_RS09515 29dbb31ea3d3fc0e06cd93811f650ba0 668 Gene3D G3DSA:3.20.110.10 68 279 1.3E-18 T 22-04-2016 IPR027291 Glycoside hydrolase 38/57, N-terminal domain SCD_RS09515 29dbb31ea3d3fc0e06cd93811f650ba0 668 Gene3D G3DSA:3.20.110.10 4 60 3.5E-5 T 22-04-2016 IPR027291 Glycoside hydrolase 38/57, N-terminal domain SCD_RS09515 29dbb31ea3d3fc0e06cd93811f650ba0 668 SUPERFAMILY SSF88688 312 389 3.4E-32 T 22-04-2016 IPR028995 Glycoside hydrolase families 57/38, central domain SCD_RS09515 29dbb31ea3d3fc0e06cd93811f650ba0 668 ProDom PD014405 HYDROLASE METABOLISM CARBOHYDRATE GLYCOSIDASE ALPHA-AMYLASE TRANSFERASE 4-ALPHA-GLUCANOTRANSFERASE GLYCOSYLTRANSFERASE FAMILY DIRECT 320 391 5.0E-25 T 22-04-2016 IPR015178 Alpha-amylase/4-alpha-glucanotransferase, central domain SCD_RS09515 29dbb31ea3d3fc0e06cd93811f650ba0 668 SUPERFAMILY SSF88713 5 280 1.52E-59 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SCD_RS09515 29dbb31ea3d3fc0e06cd93811f650ba0 668 SUPERFAMILY SSF74650 400 655 1.19E-62 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SCD_RS07435 f29ba7520a6685cfa4bf34aa29554d5e 396 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SCD_RS07435 f29ba7520a6685cfa4bf34aa29554d5e 396 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 395 1.6E-169 T 22-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 SCD_RS07435 f29ba7520a6685cfa4bf34aa29554d5e 396 PANTHER PTHR23151:SF47 2 396 2.0E-217 T 22-04-2016 SCD_RS07435 f29ba7520a6685cfa4bf34aa29554d5e 396 SUPERFAMILY SSF52777 166 395 4.36E-91 T 22-04-2016 SCD_RS07435 f29ba7520a6685cfa4bf34aa29554d5e 396 SUPERFAMILY SSF47005 95 139 1.83E-9 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SCD_RS07435 f29ba7520a6685cfa4bf34aa29554d5e 396 PANTHER PTHR23151 2 396 2.0E-217 T 22-04-2016 SCD_RS07435 f29ba7520a6685cfa4bf34aa29554d5e 396 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 166 394 3.0E-83 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 SCD_RS07435 f29ba7520a6685cfa4bf34aa29554d5e 396 Gene3D G3DSA:2.40.50.100 1 88 4.3E-26 T 22-04-2016 SCD_RS07435 f29ba7520a6685cfa4bf34aa29554d5e 396 Pfam PF00364 Biotin-requiring enzyme 4 76 1.4E-16 T 22-04-2016 IPR000089 Biotin/lipoyl attachment SCD_RS07435 f29ba7520a6685cfa4bf34aa29554d5e 396 SUPERFAMILY SSF51230 1 93 2.88E-23 T 22-04-2016 IPR011053 Single hybrid motif SCD_RS07435 f29ba7520a6685cfa4bf34aa29554d5e 396 Pfam PF02817 e3 binding domain 102 135 1.6E-9 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SCD_RS07435 f29ba7520a6685cfa4bf34aa29554d5e 396 Gene3D G3DSA:4.10.320.10 102 140 5.7E-15 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SCD_RS07435 f29ba7520a6685cfa4bf34aa29554d5e 396 Gene3D G3DSA:3.30.559.10 159 394 3.0E-94 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain SCD_RS13575 d8ce1afa32d780d08c25aefce9902e7e 117 Gene3D G3DSA:1.10.760.10 35 117 3.9E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS13575 d8ce1afa32d780d08c25aefce9902e7e 117 Pfam PF00034 Cytochrome c 33 92 4.0E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS13575 d8ce1afa32d780d08c25aefce9902e7e 117 PRINTS PR00606 Class ID cytochrome C signature 53 66 9.0E-9 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 SCD_RS13575 d8ce1afa32d780d08c25aefce9902e7e 117 PRINTS PR00606 Class ID cytochrome C signature 106 116 9.0E-9 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 SCD_RS13575 d8ce1afa32d780d08c25aefce9902e7e 117 PRINTS PR00606 Class ID cytochrome C signature 38 51 9.0E-9 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 SCD_RS13575 d8ce1afa32d780d08c25aefce9902e7e 117 SUPERFAMILY SSF46626 36 116 3.39E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS03970 44048bcfec2a33745acf9bd0da6e0fb4 75 Pfam PF01206 Sulfurtransferase TusA 5 74 4.3E-24 T 22-04-2016 IPR001455 TusA-like domain SCD_RS03970 44048bcfec2a33745acf9bd0da6e0fb4 75 PANTHER PTHR33279:SF2 4 74 6.2E-21 T 22-04-2016 SCD_RS03970 44048bcfec2a33745acf9bd0da6e0fb4 75 SUPERFAMILY SSF64307 3 74 3.66E-24 T 22-04-2016 IPR001455 TusA-like domain SCD_RS03970 44048bcfec2a33745acf9bd0da6e0fb4 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 22-04-2016 IPR001455 TusA-like domain SCD_RS03970 44048bcfec2a33745acf9bd0da6e0fb4 75 PANTHER PTHR33279 4 74 6.2E-21 T 22-04-2016 SCD_RS03970 44048bcfec2a33745acf9bd0da6e0fb4 75 Gene3D G3DSA:3.30.110.40 1 74 2.0E-31 T 22-04-2016 IPR001455 TusA-like domain SCD_RS07385 ff89382a11165fa13a29a86348dca10e 296 SUPERFAMILY SSF51621 8 291 8.07E-100 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SCD_RS07385 ff89382a11165fa13a29a86348dca10e 296 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 8 291 1.6E-129 T 22-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 SCD_RS07385 ff89382a11165fa13a29a86348dca10e 296 PANTHER PTHR21631:SF4 4 295 8.3E-157 T 22-04-2016 SCD_RS07385 ff89382a11165fa13a29a86348dca10e 296 PANTHER PTHR21631 4 295 8.3E-157 T 22-04-2016 SCD_RS07385 ff89382a11165fa13a29a86348dca10e 296 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 5 292 49.811 T 22-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 SCD_RS07385 ff89382a11165fa13a29a86348dca10e 296 Gene3D G3DSA:3.20.20.60 8 289 5.2E-98 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SCD_RS07385 ff89382a11165fa13a29a86348dca10e 296 ProSitePatterns PS00161 Isocitrate lyase signature. 121 126 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 SCD_RS07385 ff89382a11165fa13a29a86348dca10e 296 Pfam PF13714 Phosphoenolpyruvate phosphomutase 18 254 1.3E-49 T 22-04-2016 SCD_RS07390 5a354abbae2630d09f9f24ef0da5d15c 244 Pfam PF07702 UTRA domain 101 236 1.4E-33 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SCD_RS07390 5a354abbae2630d09f9f24ef0da5d15c 244 Gene3D G3DSA:3.40.1410.10 74 239 7.4E-44 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SCD_RS07390 5a354abbae2630d09f9f24ef0da5d15c 244 SMART SM00866 99 238 3.1E-30 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SCD_RS07390 5a354abbae2630d09f9f24ef0da5d15c 244 SUPERFAMILY SSF64288 65 242 3.3E-40 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SCD_RS07390 5a354abbae2630d09f9f24ef0da5d15c 244 SUPERFAMILY SSF46785 11 89 1.49E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS07390 5a354abbae2630d09f9f24ef0da5d15c 244 SMART SM00345 17 76 3.4E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SCD_RS07390 5a354abbae2630d09f9f24ef0da5d15c 244 PANTHER PTHR11751:SF292 124 148 3.8E-22 T 22-04-2016 SCD_RS07390 5a354abbae2630d09f9f24ef0da5d15c 244 PANTHER PTHR11751:SF292 12 78 3.8E-22 T 22-04-2016 SCD_RS07390 5a354abbae2630d09f9f24ef0da5d15c 244 Gene3D G3DSA:1.10.10.10 11 73 8.8E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS07390 5a354abbae2630d09f9f24ef0da5d15c 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 1.9E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SCD_RS07390 5a354abbae2630d09f9f24ef0da5d15c 244 PANTHER PTHR11751 124 148 3.8E-22 T 22-04-2016 SCD_RS07390 5a354abbae2630d09f9f24ef0da5d15c 244 PANTHER PTHR11751 12 78 3.8E-22 T 22-04-2016 SCD_RS07390 5a354abbae2630d09f9f24ef0da5d15c 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 3.8E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SCD_RS07390 5a354abbae2630d09f9f24ef0da5d15c 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 3.8E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SCD_RS05545 e30e12afe5b797afd096c449e4ac498b 297 SUPERFAMILY SSF51261 52 292 1.41E-48 T 22-04-2016 IPR011055 Duplicated hybrid motif SCD_RS05545 e30e12afe5b797afd096c449e4ac498b 297 Gene3D G3DSA:2.70.70.10 159 293 8.3E-39 T 22-04-2016 SCD_RS05545 e30e12afe5b797afd096c449e4ac498b 297 PANTHER PTHR21666 176 293 1.1E-42 T 22-04-2016 SCD_RS05545 e30e12afe5b797afd096c449e4ac498b 297 Pfam PF01476 LysM domain 53 94 8.7E-11 T 22-04-2016 IPR018392 LysM domain SCD_RS05545 e30e12afe5b797afd096c449e4ac498b 297 SMART SM00257 52 96 1.5E-10 T 22-04-2016 IPR018392 LysM domain SCD_RS05545 e30e12afe5b797afd096c449e4ac498b 297 Pfam PF01551 Peptidase family M23 195 288 1.6E-28 T 22-04-2016 IPR016047 Peptidase M23 SCD_RS05545 e30e12afe5b797afd096c449e4ac498b 297 Gene3D G3DSA:3.10.350.10 50 94 1.2E-15 T 22-04-2016 IPR018392 LysM domain SCD_RS05545 e30e12afe5b797afd096c449e4ac498b 297 PANTHER PTHR21666:SF222 176 293 1.1E-42 T 22-04-2016 SCD_RS05690 e51723c4671daf611e93998409289e7f 143 SUPERFAMILY SSF52172 10 130 1.99E-28 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS05690 e51723c4671daf611e93998409289e7f 143 Gene3D G3DSA:3.40.50.2300 10 131 2.3E-31 T 22-04-2016 SCD_RS05690 e51723c4671daf611e93998409289e7f 143 SMART SM00448 8 128 1.0E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS05690 e51723c4671daf611e93998409289e7f 143 PANTHER PTHR26402 8 131 4.6E-28 T 22-04-2016 SCD_RS05690 e51723c4671daf611e93998409289e7f 143 Pfam PF00072 Response regulator receiver domain 10 126 1.7E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS10545 8e33a6ef27b962175bd027d0b5adc0c3 156 Pfam PF01252 Signal peptidase (SPase) II 11 150 3.5E-37 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SCD_RS10545 8e33a6ef27b962175bd027d0b5adc0c3 156 PANTHER PTHR33695:SF1 1 151 7.6E-54 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SCD_RS10545 8e33a6ef27b962175bd027d0b5adc0c3 156 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 2 156 16.768 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SCD_RS10545 8e33a6ef27b962175bd027d0b5adc0c3 156 PANTHER PTHR33695 1 151 7.6E-54 T 22-04-2016 SCD_RS10545 8e33a6ef27b962175bd027d0b5adc0c3 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 95 110 3.2E-16 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SCD_RS10545 8e33a6ef27b962175bd027d0b5adc0c3 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 131 147 3.2E-16 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SCD_RS10545 8e33a6ef27b962175bd027d0b5adc0c3 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 48 56 3.2E-16 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SCD_RS10545 8e33a6ef27b962175bd027d0b5adc0c3 156 TIGRFAM TIGR00077 lspA: signal peptidase II 9 153 2.2E-40 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SCD_RS08480 398dafc4dd03510620a4ff4489eac183 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 5.0E-22 T 22-04-2016 SCD_RS08480 398dafc4dd03510620a4ff4489eac183 89 Pfam PF00312 Ribosomal protein S15 8 88 1.0E-36 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS08480 398dafc4dd03510620a4ff4489eac183 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS08480 398dafc4dd03510620a4ff4489eac183 89 SMART SM01387 8 88 3.2E-50 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS08480 398dafc4dd03510620a4ff4489eac183 89 PANTHER PTHR23321 1 88 2.0E-39 T 22-04-2016 SCD_RS08480 398dafc4dd03510620a4ff4489eac183 89 SUPERFAMILY SSF47060 3 89 8.54E-35 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 SCD_RS08480 398dafc4dd03510620a4ff4489eac183 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.141 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 SCD_RS08480 398dafc4dd03510620a4ff4489eac183 89 Gene3D G3DSA:1.10.287.10 3 89 2.0E-38 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 SCD_RS08480 398dafc4dd03510620a4ff4489eac183 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 6.9E-38 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 SCD_RS08170 dbe6f4182c6195dfdd7ae0eb4cfc93ef 716 PRINTS PR00207 Flagellin signature 111 134 4.3E-25 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SCD_RS08170 dbe6f4182c6195dfdd7ae0eb4cfc93ef 716 PRINTS PR00207 Flagellin signature 76 95 4.3E-25 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SCD_RS08170 dbe6f4182c6195dfdd7ae0eb4cfc93ef 716 PRINTS PR00207 Flagellin signature 37 54 4.3E-25 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SCD_RS08170 dbe6f4182c6195dfdd7ae0eb4cfc93ef 716 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 143 5.4E-43 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SCD_RS08170 dbe6f4182c6195dfdd7ae0eb4cfc93ef 716 Gene3D G3DSA:1.20.1330.10 54 171 5.1E-48 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SCD_RS08170 dbe6f4182c6195dfdd7ae0eb4cfc93ef 716 Gene3D G3DSA:1.20.1330.10 618 672 5.1E-48 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SCD_RS08170 dbe6f4182c6195dfdd7ae0eb4cfc93ef 716 Pfam PF00700 Bacterial flagellin C-terminal helical region 630 715 1.3E-24 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SCD_RS08170 dbe6f4182c6195dfdd7ae0eb4cfc93ef 716 PANTHER PTHR30244 566 716 7.9E-121 T 22-04-2016 SCD_RS08170 dbe6f4182c6195dfdd7ae0eb4cfc93ef 716 PANTHER PTHR30244 3 188 7.9E-121 T 22-04-2016 SCD_RS08170 dbe6f4182c6195dfdd7ae0eb4cfc93ef 716 SUPERFAMILY SSF64518 359 384 1.01E-88 T 22-04-2016 SCD_RS08170 dbe6f4182c6195dfdd7ae0eb4cfc93ef 716 SUPERFAMILY SSF64518 584 716 1.01E-88 T 22-04-2016 SCD_RS08170 dbe6f4182c6195dfdd7ae0eb4cfc93ef 716 SUPERFAMILY SSF64518 1 321 1.01E-88 T 22-04-2016 SCD_RS08170 dbe6f4182c6195dfdd7ae0eb4cfc93ef 716 PANTHER PTHR30244:SF1 566 716 7.9E-121 T 22-04-2016 SCD_RS08170 dbe6f4182c6195dfdd7ae0eb4cfc93ef 716 PANTHER PTHR30244:SF1 3 188 7.9E-121 T 22-04-2016 SCD_RS05640 bde01475824fa769d6bfa55bf698000b 407 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS05640 bde01475824fa769d6bfa55bf698000b 407 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS05640 bde01475824fa769d6bfa55bf698000b 407 Gene3D G3DSA:1.10.1060.10 16 105 3.8E-22 T 22-04-2016 SCD_RS05640 bde01475824fa769d6bfa55bf698000b 407 Pfam PF12838 4Fe-4S dicluster domain 24 89 5.9E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS05640 bde01475824fa769d6bfa55bf698000b 407 SUPERFAMILY SSF46548 21 103 3.4E-19 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SCD_RS05640 bde01475824fa769d6bfa55bf698000b 407 PIRSF PIRSF000139 6 405 6.0E-113 T 22-04-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit SCD_RS05640 bde01475824fa769d6bfa55bf698000b 407 PANTHER PTHR32479 14 400 4.1E-108 T 22-04-2016 SCD_RS05640 bde01475824fa769d6bfa55bf698000b 407 Pfam PF02754 Cysteine-rich domain 302 385 3.5E-10 T 22-04-2016 IPR004017 Cysteine-rich domain SCD_RS05640 bde01475824fa769d6bfa55bf698000b 407 Pfam PF02754 Cysteine-rich domain 171 254 2.3E-11 T 22-04-2016 IPR004017 Cysteine-rich domain SCD_RS05640 bde01475824fa769d6bfa55bf698000b 407 PANTHER PTHR32479:SF2 14 400 4.1E-108 T 22-04-2016 SCD_RS08175 d03f3c426510dcf7cb91df10e6d99bda 163 Pfam PF14559 Tetratricopeptide repeat 65 114 1.1E-5 T 22-04-2016 SCD_RS08175 d03f3c426510dcf7cb91df10e6d99bda 163 Pfam PF13432 Tetratricopeptide repeat 26 64 0.0086 T 22-04-2016 SCD_RS08175 d03f3c426510dcf7cb91df10e6d99bda 163 Gene3D G3DSA:1.25.40.10 20 115 2.2E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS08175 d03f3c426510dcf7cb91df10e6d99bda 163 SMART SM00028 54 87 19.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS08175 d03f3c426510dcf7cb91df10e6d99bda 163 SMART SM00028 20 53 2.8 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS08175 d03f3c426510dcf7cb91df10e6d99bda 163 SUPERFAMILY SSF48452 18 116 5.06E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS04010 2d3f1aa72093fb5a5f45012660ab2ef1 299 SUPERFAMILY SSF103247 38 139 4.05E-5 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SCD_RS04320 e6f9fe71fb4a526f10d7c5caf1cfeb22 431 SMART SM00387 321 431 4.2E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS04320 e6f9fe71fb4a526f10d7c5caf1cfeb22 431 SUPERFAMILY SSF55874 268 418 1.31E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS04320 e6f9fe71fb4a526f10d7c5caf1cfeb22 431 PANTHER PTHR24423:SF474 151 424 2.0E-53 T 22-04-2016 SCD_RS04320 e6f9fe71fb4a526f10d7c5caf1cfeb22 431 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 277 6.9E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS04320 e6f9fe71fb4a526f10d7c5caf1cfeb22 431 Gene3D G3DSA:3.30.565.10 285 423 6.1E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS04320 e6f9fe71fb4a526f10d7c5caf1cfeb22 431 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 324 417 9.6E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS04320 e6f9fe71fb4a526f10d7c5caf1cfeb22 431 Gene3D G3DSA:1.10.287.130 206 274 2.7E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS04320 e6f9fe71fb4a526f10d7c5caf1cfeb22 431 SUPERFAMILY SSF47384 196 278 1.65E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS04320 e6f9fe71fb4a526f10d7c5caf1cfeb22 431 SMART SM00388 213 278 2.4E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS04320 e6f9fe71fb4a526f10d7c5caf1cfeb22 431 PANTHER PTHR24423 151 424 2.0E-53 T 22-04-2016 SCD_RS04320 e6f9fe71fb4a526f10d7c5caf1cfeb22 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 2.0E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS04320 e6f9fe71fb4a526f10d7c5caf1cfeb22 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 2.0E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS04320 e6f9fe71fb4a526f10d7c5caf1cfeb22 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 2.0E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS05520 dacfab3955e82a4d79098548818b86c7 108 Pfam PF00216 Bacterial DNA-binding protein 3 90 3.6E-29 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS05520 dacfab3955e82a4d79098548818b86c7 108 Gene3D G3DSA:4.10.520.10 2 93 3.1E-35 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SCD_RS05520 dacfab3955e82a4d79098548818b86c7 108 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 1.3E-13 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS05520 dacfab3955e82a4d79098548818b86c7 108 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 1.3E-13 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS05520 dacfab3955e82a4d79098548818b86c7 108 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 1.3E-13 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS05520 dacfab3955e82a4d79098548818b86c7 108 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 93 1.4E-43 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 SCD_RS05520 dacfab3955e82a4d79098548818b86c7 108 SMART SM00411 3 92 1.5E-40 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS05520 dacfab3955e82a4d79098548818b86c7 108 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.138 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 SCD_RS05520 dacfab3955e82a4d79098548818b86c7 108 SUPERFAMILY SSF47729 3 93 9.13E-31 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SCD_RS05520 dacfab3955e82a4d79098548818b86c7 108 PANTHER PTHR33175 3 98 3.8E-48 T 22-04-2016 SCD_RS05520 dacfab3955e82a4d79098548818b86c7 108 PANTHER PTHR33175:SF2 3 98 3.8E-48 T 22-04-2016 SCD_RS05520 dacfab3955e82a4d79098548818b86c7 108 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SCD_RS13020 6acc9d807aa76389e02c154f8514a84b 654 SUPERFAMILY SSF52540 190 333 1.13E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13020 6acc9d807aa76389e02c154f8514a84b 654 SUPERFAMILY SSF52540 43 113 1.13E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13020 6acc9d807aa76389e02c154f8514a84b 654 Gene3D G3DSA:3.40.50.300 58 108 1.5E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13020 6acc9d807aa76389e02c154f8514a84b 654 Gene3D G3DSA:3.40.50.300 209 319 1.5E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13020 6acc9d807aa76389e02c154f8514a84b 654 Pfam PF00350 Dynamin family 59 275 4.2E-16 T 22-04-2016 IPR022812 Dynamin superfamily SCD_RS08915 8b8ae94c8cbf782c4edc44b97f47d5ff 383 Pfam PF01926 50S ribosome-binding GTPase 200 318 5.5E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS08915 8b8ae94c8cbf782c4edc44b97f47d5ff 383 SUPERFAMILY SSF52540 197 361 1.16E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08915 8b8ae94c8cbf782c4edc44b97f47d5ff 383 PANTHER PTHR10229:SF0 1 358 3.3E-154 T 22-04-2016 SCD_RS08915 8b8ae94c8cbf782c4edc44b97f47d5ff 383 PIRSF PIRSF006809 3 378 8.3E-138 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SCD_RS08915 8b8ae94c8cbf782c4edc44b97f47d5ff 383 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 358 8.0E-150 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SCD_RS08915 8b8ae94c8cbf782c4edc44b97f47d5ff 383 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 1.7E-8 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS08915 8b8ae94c8cbf782c4edc44b97f47d5ff 383 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 1.7E-8 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS08915 8b8ae94c8cbf782c4edc44b97f47d5ff 383 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 1.7E-8 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SCD_RS08915 8b8ae94c8cbf782c4edc44b97f47d5ff 383 PANTHER PTHR10229 1 358 3.3E-154 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SCD_RS08915 8b8ae94c8cbf782c4edc44b97f47d5ff 383 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 4.0E-28 T 22-04-2016 IPR032305 GTP-binding protein, middle domain SCD_RS08915 8b8ae94c8cbf782c4edc44b97f47d5ff 383 Hamap MF_00900 GTPase HflX [hflX]. 27 379 44.874 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SCD_RS08915 8b8ae94c8cbf782c4edc44b97f47d5ff 383 Gene3D G3DSA:3.40.50.300 198 361 9.4E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08915 8b8ae94c8cbf782c4edc44b97f47d5ff 383 Pfam PF13167 GTP-binding GTPase N-terminal 24 112 1.0E-30 T 22-04-2016 IPR025121 GTPase HflX, N-terminal SCD_RS03365 891cd90650039713f78b62b79340dcd6 427 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 14 421 1.9E-158 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 SCD_RS03365 891cd90650039713f78b62b79340dcd6 427 Pfam PF04052 TolB amino-terminal domain 23 125 4.2E-29 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 SCD_RS03365 891cd90650039713f78b62b79340dcd6 427 Gene3D G3DSA:3.40.50.10070 23 149 3.8E-43 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 SCD_RS03365 891cd90650039713f78b62b79340dcd6 427 Hamap MF_00671 Protein TolB [tolB]. 7 420 35.358 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 SCD_RS03365 891cd90650039713f78b62b79340dcd6 427 PANTHER PTHR11731 156 422 2.8E-77 T 22-04-2016 SCD_RS03365 891cd90650039713f78b62b79340dcd6 427 PANTHER PTHR11731 13 119 2.8E-77 T 22-04-2016 SCD_RS03365 891cd90650039713f78b62b79340dcd6 427 SUPERFAMILY SSF52964 30 155 3.4E-36 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 SCD_RS03365 891cd90650039713f78b62b79340dcd6 427 Gene3D G3DSA:2.130.10.10 150 422 1.4E-77 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SCD_RS03365 891cd90650039713f78b62b79340dcd6 427 PANTHER PTHR11731:SF123 156 422 2.8E-77 T 22-04-2016 SCD_RS03365 891cd90650039713f78b62b79340dcd6 427 PANTHER PTHR11731:SF123 13 119 2.8E-77 T 22-04-2016 SCD_RS03365 891cd90650039713f78b62b79340dcd6 427 Pfam PF07676 WD40-like Beta Propeller Repeat 236 264 1.4E-6 T 22-04-2016 IPR011659 WD40-like Beta Propeller SCD_RS03365 891cd90650039713f78b62b79340dcd6 427 Pfam PF07676 WD40-like Beta Propeller Repeat 274 309 1.7E-12 T 22-04-2016 IPR011659 WD40-like Beta Propeller SCD_RS03365 891cd90650039713f78b62b79340dcd6 427 Pfam PF07676 WD40-like Beta Propeller Repeat 318 346 0.0083 T 22-04-2016 IPR011659 WD40-like Beta Propeller SCD_RS03365 891cd90650039713f78b62b79340dcd6 427 Pfam PF07676 WD40-like Beta Propeller Repeat 188 220 1.1E-6 T 22-04-2016 IPR011659 WD40-like Beta Propeller SCD_RS03365 891cd90650039713f78b62b79340dcd6 427 Pfam PF07676 WD40-like Beta Propeller Repeat 363 391 0.005 T 22-04-2016 IPR011659 WD40-like Beta Propeller SCD_RS03365 891cd90650039713f78b62b79340dcd6 427 SUPERFAMILY SSF69304 150 422 6.8E-53 T 22-04-2016 SCD_RS01075 4530ca48431df40a2805bc81f8dd0320 313 SUPERFAMILY SSF109604 14 270 4.71E-39 T 22-04-2016 SCD_RS01075 4530ca48431df40a2805bc81f8dd0320 313 PANTHER PTHR33525 14 288 1.0E-14 T 22-04-2016 SCD_RS01075 4530ca48431df40a2805bc81f8dd0320 313 Pfam PF08668 HDOD domain 20 218 1.6E-19 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS01075 4530ca48431df40a2805bc81f8dd0320 313 Gene3D G3DSA:1.10.3150.10 17 270 6.6E-40 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS10010 354ec8a42958b1752d65443d2732ea42 219 ProDom PD037531 MEMBRANE HYDROGENASE SUBUNIT COMPONENT HYDROGENASE-4 E OXIDOREDUCTASE PRECURSOR SIGNAL 1.-.-.- 26 190 2.0E-65 T 22-04-2016 SCD_RS10010 354ec8a42958b1752d65443d2732ea42 219 PANTHER PTHR38601:SF1 1 219 7.1E-42 T 22-04-2016 SCD_RS10010 354ec8a42958b1752d65443d2732ea42 219 PANTHER PTHR38601 1 219 7.1E-42 T 22-04-2016 SCD_RS09140 401d1e12ff32640b5927d341dcf05fbb 535 Gene3D G3DSA:3.40.50.620 256 514 5.4E-74 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS09140 401d1e12ff32640b5927d341dcf05fbb 535 PANTHER PTHR23090 1 533 8.2E-160 T 22-04-2016 SCD_RS09140 401d1e12ff32640b5927d341dcf05fbb 535 TIGRFAM TIGR00552 nadE: NAD+ synthetase 261 509 1.9E-59 T 22-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 SCD_RS09140 401d1e12ff32640b5927d341dcf05fbb 535 SUPERFAMILY SSF56317 1 241 1.23E-60 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SCD_RS09140 401d1e12ff32640b5927d341dcf05fbb 535 Gene3D G3DSA:3.60.110.10 1 240 7.3E-60 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SCD_RS09140 401d1e12ff32640b5927d341dcf05fbb 535 SUPERFAMILY SSF52402 255 516 3.97E-77 T 22-04-2016 SCD_RS09140 401d1e12ff32640b5927d341dcf05fbb 535 Pfam PF02540 NAD synthase 259 507 2.6E-75 T 22-04-2016 IPR022310 NAD/GMP synthase SCD_RS09140 401d1e12ff32640b5927d341dcf05fbb 535 Pfam PF00795 Carbon-nitrogen hydrolase 2 239 1.3E-26 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SCD_RS02265 6171d3e32981e59d85ac0f42cd4f2f51 196 Pfam PF00510 Cytochrome c oxidase subunit III 21 194 7.7E-16 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 SCD_RS02265 6171d3e32981e59d85ac0f42cd4f2f51 196 PANTHER PTHR11403 20 196 3.4E-58 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 SCD_RS02265 6171d3e32981e59d85ac0f42cd4f2f51 196 PANTHER PTHR11403:SF6 20 196 3.4E-58 T 22-04-2016 SCD_RS02265 6171d3e32981e59d85ac0f42cd4f2f51 196 SUPERFAMILY SSF81452 17 195 2.35E-50 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 SCD_RS02265 6171d3e32981e59d85ac0f42cd4f2f51 196 Gene3D G3DSA:1.20.120.80 18 195 1.9E-49 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 SCD_RS11190 8a238ac516c4c8650e2aa42e71c1c4f8 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 131 300 3.6E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SCD_RS11190 8a238ac516c4c8650e2aa42e71c1c4f8 303 SUPERFAMILY SSF161098 107 291 1.96E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SCD_RS11190 8a238ac516c4c8650e2aa42e71c1c4f8 303 PANTHER PTHR30151:SF7 57 302 2.9E-97 T 22-04-2016 SCD_RS11190 8a238ac516c4c8650e2aa42e71c1c4f8 303 PANTHER PTHR30151 57 302 2.9E-97 T 22-04-2016 SCD_RS11190 8a238ac516c4c8650e2aa42e71c1c4f8 303 Gene3D G3DSA:1.10.3720.10 104 300 4.8E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SCD_RS11190 8a238ac516c4c8650e2aa42e71c1c4f8 303 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 97 294 6.4E-78 T 22-04-2016 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 SCD_RS10015 4853881dbf2ae0912bf3d60c12667c68 482 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 129 148 8.0E-12 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SCD_RS10015 4853881dbf2ae0912bf3d60c12667c68 482 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 379 405 8.0E-12 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SCD_RS10015 4853881dbf2ae0912bf3d60c12667c68 482 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 8.0E-12 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SCD_RS10015 4853881dbf2ae0912bf3d60c12667c68 482 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 327 346 8.0E-12 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SCD_RS10015 4853881dbf2ae0912bf3d60c12667c68 482 Pfam PF00361 Proton-conducting membrane transporter 124 415 2.8E-53 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SCD_RS10015 4853881dbf2ae0912bf3d60c12667c68 482 PANTHER PTHR22773 1 481 1.5E-141 T 22-04-2016 SCD_RS10015 4853881dbf2ae0912bf3d60c12667c68 482 PANTHER PTHR22773:SF56 1 481 1.5E-141 T 22-04-2016 SCD_RS06540 40f29226a803bb22375071298de2da98 145 SUPERFAMILY SSF54523 37 143 1.88E-39 T 22-04-2016 SCD_RS06540 40f29226a803bb22375071298de2da98 145 PANTHER PTHR30093:SF9 8 144 7.1E-66 T 22-04-2016 SCD_RS06540 40f29226a803bb22375071298de2da98 145 PANTHER PTHR30093 8 144 7.1E-66 T 22-04-2016 SCD_RS06540 40f29226a803bb22375071298de2da98 145 Pfam PF08334 Type II secretion system (T2SS), protein G 34 143 2.0E-43 T 22-04-2016 IPR013545 Type II secretion system protein G SCD_RS06540 40f29226a803bb22375071298de2da98 145 Gene3D G3DSA:3.30.700.10 12 75 5.1E-9 T 22-04-2016 SCD_RS06540 40f29226a803bb22375071298de2da98 145 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 7 30 5.0E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS06540 40f29226a803bb22375071298de2da98 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS06540 40f29226a803bb22375071298de2da98 145 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 10 144 8.8E-59 T 22-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 SCD_RS06540 40f29226a803bb22375071298de2da98 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 47 65 3.6E-18 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SCD_RS06540 40f29226a803bb22375071298de2da98 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 11 36 3.6E-18 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SCD_RS06540 40f29226a803bb22375071298de2da98 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 1.5E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS14045 b216d33f7bf1a98b400ee328e0b418f8 444 Pfam PF00696 Amino acid kinase family 31 270 1.7E-26 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SCD_RS14045 b216d33f7bf1a98b400ee328e0b418f8 444 PIRSF PIRSF000423 4 444 6.0E-196 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 SCD_RS14045 b216d33f7bf1a98b400ee328e0b418f8 444 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 14 444 5.5E-185 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 SCD_RS14045 b216d33f7bf1a98b400ee328e0b418f8 444 Gene3D G3DSA:3.40.630.30 299 443 6.9E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS14045 b216d33f7bf1a98b400ee328e0b418f8 444 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 444 213.978 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 SCD_RS14045 b216d33f7bf1a98b400ee328e0b418f8 444 PANTHER PTHR30602 11 444 7.0E-195 T 22-04-2016 SCD_RS14045 b216d33f7bf1a98b400ee328e0b418f8 444 SUPERFAMILY SSF53633 12 295 2.93E-65 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SCD_RS14045 b216d33f7bf1a98b400ee328e0b418f8 444 Gene3D G3DSA:3.40.1160.10 29 293 6.3E-65 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SCD_RS14045 b216d33f7bf1a98b400ee328e0b418f8 444 PANTHER PTHR30602:SF3 11 444 7.0E-195 T 22-04-2016 SCD_RS14045 b216d33f7bf1a98b400ee328e0b418f8 444 SUPERFAMILY SSF55729 299 423 1.69E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS14045 b216d33f7bf1a98b400ee328e0b418f8 444 Pfam PF13508 Acetyltransferase (GNAT) domain 338 417 1.4E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SCD_RS14645 2690cc4fef8038699f5154bfc651599f 399 Gene3D G3DSA:3.40.50.2000 160 354 1.5E-28 T 22-04-2016 SCD_RS14645 2690cc4fef8038699f5154bfc651599f 399 Pfam PF13692 Glycosyl transferases group 1 201 342 1.9E-29 T 22-04-2016 SCD_RS14645 2690cc4fef8038699f5154bfc651599f 399 Pfam PF13439 Glycosyltransferase Family 4 17 174 3.3E-19 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SCD_RS14645 2690cc4fef8038699f5154bfc651599f 399 SUPERFAMILY SSF53756 6 380 7.46E-75 T 22-04-2016 SCD_RS14645 2690cc4fef8038699f5154bfc651599f 399 TIGRFAM TIGR03088 stp2: sugar transferase, PEP-CTERM/EpsH1 system associated 6 378 6.6E-173 T 22-04-2016 IPR017522 Sugar transferase, PEP-CTERM, Stp2 SCD_RS14645 2690cc4fef8038699f5154bfc651599f 399 PANTHER PTHR12526 8 378 7.9E-55 T 22-04-2016 SCD_RS14885 4e1f1f22804e8cf0e4777bcdfec585e3 1565 SUPERFAMILY SSF56235 31 456 5.75E-159 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SCD_RS14885 4e1f1f22804e8cf0e4777bcdfec585e3 1565 Pfam PF01645 Conserved region in glutamate synthase 827 1217 1.6E-156 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 SCD_RS14885 4e1f1f22804e8cf0e4777bcdfec585e3 1565 SUPERFAMILY SSF51395 475 1263 2.89E-264 T 22-04-2016 SCD_RS14885 4e1f1f22804e8cf0e4777bcdfec585e3 1565 Gene3D G3DSA:3.20.20.70 819 1258 9.8E-183 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS14885 4e1f1f22804e8cf0e4777bcdfec585e3 1565 Gene3D G3DSA:2.160.20.60 1271 1561 5.5E-109 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SCD_RS14885 4e1f1f22804e8cf0e4777bcdfec585e3 1565 PANTHER PTHR11938:SF1 20 1482 0.0 T 22-04-2016 SCD_RS14885 4e1f1f22804e8cf0e4777bcdfec585e3 1565 PANTHER PTHR11938:SF1 1505 1556 0.0 T 22-04-2016 SCD_RS14885 4e1f1f22804e8cf0e4777bcdfec585e3 1565 Gene3D G3DSA:3.20.20.70 474 817 1.7E-108 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS14885 4e1f1f22804e8cf0e4777bcdfec585e3 1565 Pfam PF04898 Glutamate synthase central domain 480 766 2.8E-113 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 SCD_RS14885 4e1f1f22804e8cf0e4777bcdfec585e3 1565 Pfam PF00310 Glutamine amidotransferases class-II 31 453 9.6E-189 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SCD_RS14885 4e1f1f22804e8cf0e4777bcdfec585e3 1565 Gene3D G3DSA:3.60.20.10 31 462 5.4E-189 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SCD_RS14885 4e1f1f22804e8cf0e4777bcdfec585e3 1565 Pfam PF01493 GXGXG motif 1298 1481 2.2E-83 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SCD_RS14885 4e1f1f22804e8cf0e4777bcdfec585e3 1565 PANTHER PTHR11938 20 1482 0.0 T 22-04-2016 SCD_RS14885 4e1f1f22804e8cf0e4777bcdfec585e3 1565 PANTHER PTHR11938 1505 1556 0.0 T 22-04-2016 SCD_RS14885 4e1f1f22804e8cf0e4777bcdfec585e3 1565 SUPERFAMILY SSF69336 1266 1553 1.1E-95 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SCD_RS14325 e63273e61af075df24cd9a135a7e2747 386 Gene3D G3DSA:3.40.50.620 36 162 1.2E-5 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS14325 e63273e61af075df24cd9a135a7e2747 386 SUPERFAMILY SSF52402 8 179 4.19E-18 T 22-04-2016 SCD_RS14325 e63273e61af075df24cd9a135a7e2747 386 TIGRFAM TIGR03573 WbuX: N-acetyl sugar amidotransferase 2 334 6.1E-96 T 22-04-2016 IPR020022 N-acetyl sugar amidotransferase SCD_RS09630 1dd31c619472da4815cee66584b3d217 117 Pfam PF11154 Protein of unknown function (DUF2934) 77 112 6.8E-11 T 22-04-2016 IPR021327 Protein of unknown function DUF2934 SCD_RS03655 727210c92e7975c674580b9ff25ba51d 108 PANTHER PTHR10438 5 108 2.6E-39 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SCD_RS03655 727210c92e7975c674580b9ff25ba51d 108 PIRSF PIRSF000077 2 108 4.4E-43 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SCD_RS03655 727210c92e7975c674580b9ff25ba51d 108 Gene3D G3DSA:3.40.30.10 2 107 4.2E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS03655 727210c92e7975c674580b9ff25ba51d 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SCD_RS03655 727210c92e7975c674580b9ff25ba51d 108 SUPERFAMILY SSF52833 3 107 4.29E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS03655 727210c92e7975c674580b9ff25ba51d 108 PRINTS PR00421 Thioredoxin family signature 24 32 7.5E-10 T 22-04-2016 SCD_RS03655 727210c92e7975c674580b9ff25ba51d 108 PRINTS PR00421 Thioredoxin family signature 32 41 7.5E-10 T 22-04-2016 SCD_RS03655 727210c92e7975c674580b9ff25ba51d 108 PRINTS PR00421 Thioredoxin family signature 72 83 7.5E-10 T 22-04-2016 SCD_RS03655 727210c92e7975c674580b9ff25ba51d 108 Pfam PF00085 Thioredoxin 5 106 2.2E-33 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 SCD_RS03655 727210c92e7975c674580b9ff25ba51d 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 4.4E-38 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SCD_RS02910 e5a666120a93330de69007c6cefdd0ff 432 Gene3D G3DSA:3.40.50.1980 29 243 1.8E-80 T 22-04-2016 SCD_RS02910 e5a666120a93330de69007c6cefdd0ff 432 SUPERFAMILY SSF53720 32 430 4.32E-84 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SCD_RS02910 e5a666120a93330de69007c6cefdd0ff 432 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 36 430 1.1E-159 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SCD_RS02910 e5a666120a93330de69007c6cefdd0ff 432 PIRSF PIRSF000099 1 432 3.3E-158 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SCD_RS02910 e5a666120a93330de69007c6cefdd0ff 432 PANTHER PTHR21256 1 432 1.3E-193 T 22-04-2016 SCD_RS02910 e5a666120a93330de69007c6cefdd0ff 432 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 233 265 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SCD_RS02910 e5a666120a93330de69007c6cefdd0ff 432 PRINTS PR00083 Histidinol dehydrogenase signature 365 383 8.9E-84 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SCD_RS02910 e5a666120a93330de69007c6cefdd0ff 432 PRINTS PR00083 Histidinol dehydrogenase signature 36 60 8.9E-84 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SCD_RS02910 e5a666120a93330de69007c6cefdd0ff 432 PRINTS PR00083 Histidinol dehydrogenase signature 233 254 8.9E-84 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SCD_RS02910 e5a666120a93330de69007c6cefdd0ff 432 PRINTS PR00083 Histidinol dehydrogenase signature 324 349 8.9E-84 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SCD_RS02910 e5a666120a93330de69007c6cefdd0ff 432 PRINTS PR00083 Histidinol dehydrogenase signature 174 200 8.9E-84 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SCD_RS02910 e5a666120a93330de69007c6cefdd0ff 432 PRINTS PR00083 Histidinol dehydrogenase signature 204 229 8.9E-84 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SCD_RS02910 e5a666120a93330de69007c6cefdd0ff 432 PRINTS PR00083 Histidinol dehydrogenase signature 255 274 8.9E-84 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SCD_RS02910 e5a666120a93330de69007c6cefdd0ff 432 PRINTS PR00083 Histidinol dehydrogenase signature 140 166 8.9E-84 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SCD_RS02910 e5a666120a93330de69007c6cefdd0ff 432 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 8 431 40.648 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SCD_RS02910 e5a666120a93330de69007c6cefdd0ff 432 Pfam PF00815 Histidinol dehydrogenase 27 431 8.6E-167 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SCD_RS10870 fab2decaa01b7983cb20b1f7ef58a464 277 SUPERFAMILY SSF103481 30 131 2.09E-16 T 22-04-2016 SCD_RS10870 fab2decaa01b7983cb20b1f7ef58a464 277 Pfam PF00892 EamA-like transporter family 1 126 1.3E-19 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SCD_RS10870 fab2decaa01b7983cb20b1f7ef58a464 277 Pfam PF00892 EamA-like transporter family 139 267 3.4E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SCD_RS10870 fab2decaa01b7983cb20b1f7ef58a464 277 SUPERFAMILY SSF103481 174 269 6.93E-9 T 22-04-2016 SCD_RS10870 fab2decaa01b7983cb20b1f7ef58a464 277 PANTHER PTHR22911 1 269 9.1E-53 T 22-04-2016 SCD_RS06230 6ee1ed9d51bca153fa5221cce2137391 141 Pfam PF01592 NifU-like N terminal domain 3 125 6.4E-56 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 SCD_RS06230 6ee1ed9d51bca153fa5221cce2137391 141 PANTHER PTHR10093:SF3 1 130 3.9E-94 T 22-04-2016 SCD_RS06230 6ee1ed9d51bca153fa5221cce2137391 141 Gene3D G3DSA:3.90.1010.10 2 126 9.2E-56 T 22-04-2016 SCD_RS06230 6ee1ed9d51bca153fa5221cce2137391 141 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 3.3E-68 T 22-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 SCD_RS06230 6ee1ed9d51bca153fa5221cce2137391 141 SUPERFAMILY SSF82649 2 126 2.43E-49 T 22-04-2016 SCD_RS06230 6ee1ed9d51bca153fa5221cce2137391 141 PANTHER PTHR10093 1 130 3.9E-94 T 22-04-2016 SCD_RS11805 7a6faacaf027a8ea84cf1194b7fa4706 148 Pfam PF00114 Pilin (bacterial filament) 37 146 1.7E-16 T 22-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 SCD_RS11805 7a6faacaf027a8ea84cf1194b7fa4706 148 SUPERFAMILY SSF54523 8 147 8.89E-25 T 22-04-2016 SCD_RS11805 7a6faacaf027a8ea84cf1194b7fa4706 148 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 1.7E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS11805 7a6faacaf027a8ea84cf1194b7fa4706 148 PANTHER PTHR30093 1 64 4.0E-17 T 22-04-2016 SCD_RS11805 7a6faacaf027a8ea84cf1194b7fa4706 148 Gene3D G3DSA:3.30.700.10 8 147 1.0E-38 T 22-04-2016 SCD_RS11805 7a6faacaf027a8ea84cf1194b7fa4706 148 Pfam PF13633 Prokaryotic N-terminal methylation site 5 31 1.1E-12 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS11805 7a6faacaf027a8ea84cf1194b7fa4706 148 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS12170 086b5a3483ace920585c1852d0cb0e09 447 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 437 32.867 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 SCD_RS12170 086b5a3483ace920585c1852d0cb0e09 447 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.4E-20 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SCD_RS12170 086b5a3483ace920585c1852d0cb0e09 447 Gene3D G3DSA:1.20.120.140 2 89 8.9E-34 T 22-04-2016 SCD_RS12170 086b5a3483ace920585c1852d0cb0e09 447 Gene3D G3DSA:3.40.50.300 94 297 4.4E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12170 086b5a3483ace920585c1852d0cb0e09 447 SUPERFAMILY SSF47446 329 428 1.41E-32 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SCD_RS12170 086b5a3483ace920585c1852d0cb0e09 447 Gene3D G3DSA:1.10.260.30 328 429 3.0E-35 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SCD_RS12170 086b5a3483ace920585c1852d0cb0e09 447 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 2.3E-73 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SCD_RS12170 086b5a3483ace920585c1852d0cb0e09 447 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 427 4.1E-176 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SCD_RS12170 086b5a3483ace920585c1852d0cb0e09 447 Pfam PF02978 Signal peptide binding domain 329 425 4.2E-32 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SCD_RS12170 086b5a3483ace920585c1852d0cb0e09 447 SMART SM00963 1 86 4.0E-38 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SCD_RS12170 086b5a3483ace920585c1852d0cb0e09 447 PANTHER PTHR11564:SF7 1 433 2.0E-243 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SCD_RS12170 086b5a3483ace920585c1852d0cb0e09 447 SUPERFAMILY SSF52540 42 357 7.33E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12170 086b5a3483ace920585c1852d0cb0e09 447 SMART SM00962 100 296 4.7E-113 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SCD_RS12170 086b5a3483ace920585c1852d0cb0e09 447 SMART SM00382 99 247 1.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS12170 086b5a3483ace920585c1852d0cb0e09 447 PANTHER PTHR11564 1 433 2.0E-243 T 22-04-2016 SCD_RS12170 086b5a3483ace920585c1852d0cb0e09 447 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SCD_RS14190 f24e0470cc27de3dfdf6d4ce21b32d4f 325 Pfam PF13489 Methyltransferase domain 114 253 5.7E-26 T 22-04-2016 SCD_RS14190 f24e0470cc27de3dfdf6d4ce21b32d4f 325 SUPERFAMILY SSF53335 104 259 6.37E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS14190 f24e0470cc27de3dfdf6d4ce21b32d4f 325 PANTHER PTHR10108:SF779 108 271 5.0E-13 T 22-04-2016 SCD_RS14190 f24e0470cc27de3dfdf6d4ce21b32d4f 325 Gene3D G3DSA:3.40.50.150 107 273 1.5E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS14190 f24e0470cc27de3dfdf6d4ce21b32d4f 325 PANTHER PTHR10108 108 271 5.0E-13 T 22-04-2016 SCD_RS03740 aad7f9897a3b0cda376958965fb8b09c 422 Gene3D G3DSA:3.30.70.100 320 405 1.9E-23 T 22-04-2016 SCD_RS03740 aad7f9897a3b0cda376958965fb8b09c 422 SUPERFAMILY SSF82689 319 417 3.66E-28 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SCD_RS03740 aad7f9897a3b0cda376958965fb8b09c 422 Gene3D G3DSA:2.30.30.60 266 314 2.1E-11 T 22-04-2016 SCD_RS03740 aad7f9897a3b0cda376958965fb8b09c 422 PANTHER PTHR30347:SF3 70 421 8.9E-72 T 22-04-2016 SCD_RS03740 aad7f9897a3b0cda376958965fb8b09c 422 SUPERFAMILY SSF82861 169 248 8.5E-11 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SCD_RS03740 aad7f9897a3b0cda376958965fb8b09c 422 SUPERFAMILY SSF50182 250 315 1.9E-13 T 22-04-2016 IPR010920 LSM domain SCD_RS03740 aad7f9897a3b0cda376958965fb8b09c 422 Pfam PF00924 Mechanosensitive ion channel 207 407 2.4E-47 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SCD_RS03740 aad7f9897a3b0cda376958965fb8b09c 422 PANTHER PTHR30347 70 421 8.9E-72 T 22-04-2016 SCD_RS10875 9db1f7b4132e80ae53ba06379d220347 115 Pfam PF11964 SpoIIAA-like 13 112 8.0E-15 T 22-04-2016 IPR021866 SpoIIAA-like SCD_RS10875 9db1f7b4132e80ae53ba06379d220347 115 Gene3D G3DSA:3.40.50.10600 1 113 4.8E-29 T 22-04-2016 IPR021866 SpoIIAA-like SCD_RS10875 9db1f7b4132e80ae53ba06379d220347 115 SUPERFAMILY SSF52091 6 113 7.46E-29 T 22-04-2016 IPR002645 STAS domain SCD_RS03040 66fccfb0a1b61f1ef84abb72bc8244be 115 PANTHER PTHR33910 9 114 2.4E-19 T 22-04-2016 SCD_RS03040 66fccfb0a1b61f1ef84abb72bc8244be 115 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 58 110 3.5E-18 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 SCD_RS03040 66fccfb0a1b61f1ef84abb72bc8244be 115 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 56 111 5.6E-15 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SCD_RS03040 66fccfb0a1b61f1ef84abb72bc8244be 115 PANTHER PTHR33910:SF1 9 114 2.4E-19 T 22-04-2016 SCD_RS03040 66fccfb0a1b61f1ef84abb72bc8244be 115 Hamap MF_00422 Protein translocase subunit SecE [secE]. 54 109 11.715 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE SCD_RS03040 66fccfb0a1b61f1ef84abb72bc8244be 115 PRINTS PR01650 Bacterial translocase SecE signature 77 97 2.2E-15 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SCD_RS03040 66fccfb0a1b61f1ef84abb72bc8244be 115 PRINTS PR01650 Bacterial translocase SecE signature 32 53 2.2E-15 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SCD_RS03040 66fccfb0a1b61f1ef84abb72bc8244be 115 PRINTS PR01650 Bacterial translocase SecE signature 97 113 2.2E-15 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SCD_RS03040 66fccfb0a1b61f1ef84abb72bc8244be 115 PRINTS PR01650 Bacterial translocase SecE signature 53 73 2.2E-15 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SCD_RS03040 66fccfb0a1b61f1ef84abb72bc8244be 115 Gene3D G3DSA:1.20.5.1030 53 111 8.0E-22 T 22-04-2016 SCD_RS07470 af9560941c6e166f8492f7b005ddf130 476 Pfam PF00271 Helicase conserved C-terminal domain 236 342 5.5E-29 T 22-04-2016 IPR001650 Helicase, C-terminal SCD_RS07470 af9560941c6e166f8492f7b005ddf130 476 PANTHER PTHR24031:SF0 1 423 3.7E-190 T 22-04-2016 SCD_RS07470 af9560941c6e166f8492f7b005ddf130 476 Gene3D G3DSA:3.40.50.300 1 214 3.5E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07470 af9560941c6e166f8492f7b005ddf130 476 Pfam PF00270 DEAD/DEAH box helicase 25 199 1.0E-50 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SCD_RS07470 af9560941c6e166f8492f7b005ddf130 476 SMART SM00487 20 225 5.9E-63 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SCD_RS07470 af9560941c6e166f8492f7b005ddf130 476 Gene3D G3DSA:3.40.50.300 215 374 2.5E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07470 af9560941c6e166f8492f7b005ddf130 476 SUPERFAMILY SSF52540 77 361 4.15E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07470 af9560941c6e166f8492f7b005ddf130 476 SMART SM00490 261 342 3.5E-34 T 22-04-2016 IPR001650 Helicase, C-terminal SCD_RS07470 af9560941c6e166f8492f7b005ddf130 476 PANTHER PTHR24031 1 423 3.7E-190 T 22-04-2016 SCD_RS07470 af9560941c6e166f8492f7b005ddf130 476 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SCD_RS14455 9e07d93b485d28c644d803ff83331b0c 275 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 265 17.772 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SCD_RS14455 9e07d93b485d28c644d803ff83331b0c 275 PANTHER PTHR30622 2 273 5.4E-126 T 22-04-2016 SCD_RS14455 9e07d93b485d28c644d803ff83331b0c 275 PANTHER PTHR30622:SF3 2 273 5.4E-126 T 22-04-2016 SCD_RS14455 9e07d93b485d28c644d803ff83331b0c 275 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 257 3.7E-74 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SCD_RS14455 9e07d93b485d28c644d803ff83331b0c 275 Pfam PF02673 Bacitracin resistance protein BacA 9 260 6.9E-79 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SCD_RS07645 c8f29c92f00ed91d84021bb3f73dbefe 313 Pfam PF01343 Peptidase family S49 129 271 2.9E-35 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 SCD_RS07645 c8f29c92f00ed91d84021bb3f73dbefe 313 SUPERFAMILY SSF52096 203 263 5.36E-42 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SCD_RS07645 c8f29c92f00ed91d84021bb3f73dbefe 313 SUPERFAMILY SSF52096 40 174 5.36E-42 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SCD_RS07645 c8f29c92f00ed91d84021bb3f73dbefe 313 PANTHER PTHR30341:SF1 13 296 2.0E-91 T 22-04-2016 SCD_RS07645 c8f29c92f00ed91d84021bb3f73dbefe 313 PANTHER PTHR30341 13 296 2.0E-91 T 22-04-2016 SCD_RS07645 c8f29c92f00ed91d84021bb3f73dbefe 313 Gene3D G3DSA:3.90.226.10 38 166 2.6E-45 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SCD_RS07645 c8f29c92f00ed91d84021bb3f73dbefe 313 Gene3D G3DSA:3.90.226.10 204 287 2.6E-45 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SCD_RS11680 85c558d5e72146f317da690a48196c7f 617 PANTHER PTHR33121 297 615 3.1E-75 T 22-04-2016 SCD_RS11680 85c558d5e72146f317da690a48196c7f 617 SUPERFAMILY SSF55073 191 353 3.37E-42 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS11680 85c558d5e72146f317da690a48196c7f 617 Pfam PF00990 Diguanylate cyclase, GGDEF domain 186 346 9.9E-43 T 22-04-2016 IPR000160 GGDEF domain SCD_RS11680 85c558d5e72146f317da690a48196c7f 617 SUPERFAMILY SSF141868 367 615 2.48E-82 T 22-04-2016 IPR001633 EAL domain SCD_RS11680 85c558d5e72146f317da690a48196c7f 617 PANTHER PTHR33121:SF13 297 615 3.1E-75 T 22-04-2016 SCD_RS11680 85c558d5e72146f317da690a48196c7f 617 Gene3D G3DSA:3.30.70.270 187 359 2.1E-49 T 22-04-2016 SCD_RS11680 85c558d5e72146f317da690a48196c7f 617 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 183 350 1.5E-40 T 22-04-2016 IPR000160 GGDEF domain SCD_RS11680 85c558d5e72146f317da690a48196c7f 617 Pfam PF00563 EAL domain 370 603 2.5E-68 T 22-04-2016 IPR001633 EAL domain SCD_RS11680 85c558d5e72146f317da690a48196c7f 617 SMART SM00267 175 351 8.2E-53 T 22-04-2016 IPR000160 GGDEF domain SCD_RS11680 85c558d5e72146f317da690a48196c7f 617 Gene3D G3DSA:3.20.20.450 364 615 1.8E-87 T 22-04-2016 IPR001633 EAL domain SCD_RS11680 85c558d5e72146f317da690a48196c7f 617 SMART SM00052 361 608 8.3E-102 T 22-04-2016 IPR001633 EAL domain SCD_RS03635 51e2c3a20306154ab44b50d555b8dd25 551 PANTHER PTHR33908 1 444 1.7E-32 T 22-04-2016 SCD_RS03635 51e2c3a20306154ab44b50d555b8dd25 551 PANTHER PTHR33908:SF3 1 444 1.7E-32 T 22-04-2016 SCD_RS04675 2047eb85a81b918d02868aea661b14c8 158 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 41.746 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 SCD_RS04675 2047eb85a81b918d02868aea661b14c8 158 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 1.1E-75 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 SCD_RS04675 2047eb85a81b918d02868aea661b14c8 158 SUPERFAMILY SSF56770 9 153 1.28E-66 T 22-04-2016 SCD_RS04675 2047eb85a81b918d02868aea661b14c8 158 PANTHER PTHR11995 11 156 1.3E-123 T 22-04-2016 SCD_RS04675 2047eb85a81b918d02868aea661b14c8 158 Gene3D G3DSA:3.40.50.700 21 149 2.6E-32 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SCD_RS04675 2047eb85a81b918d02868aea661b14c8 158 PANTHER PTHR11995:SF19 11 156 1.3E-123 T 22-04-2016 SCD_RS04675 2047eb85a81b918d02868aea661b14c8 158 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 145 9.9E-22 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SCD_RS04675 2047eb85a81b918d02868aea661b14c8 158 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 SCD_RS05005 78fe08998e22f2ad4e16209d3e032ab0 216 SUPERFAMILY SSF46785 14 95 5.96E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS05005 78fe08998e22f2ad4e16209d3e032ab0 216 Gene3D G3DSA:1.10.10.10 16 85 2.5E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS05005 78fe08998e22f2ad4e16209d3e032ab0 216 Gene3D G3DSA:3.30.460.10 103 191 3.2E-14 T 22-04-2016 SCD_RS05005 78fe08998e22f2ad4e16209d3e032ab0 216 SUPERFAMILY SSF81301 103 201 3.27E-13 T 22-04-2016 SCD_RS11600 03a4ba04a2e0ec817936c0d47c786bd2 96 TIGRFAM TIGR04353 PqqD_rel_X: PqqD family protein, HPr-rel-A system 20 92 2.0E-15 T 22-04-2016 IPR027599 PqqD family protein, HPr-rel-A system SCD_RS12655 854525b82de47c28afd7b2dab9d47042 870 Pfam PF03968 OstA-like protein 192 297 1.5E-4 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal SCD_RS12655 854525b82de47c28afd7b2dab9d47042 870 Gene3D G3DSA:2.60.450.10 178 304 1.1E-6 T 22-04-2016 SCD_RS12655 854525b82de47c28afd7b2dab9d47042 870 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 26 838 19.77 T 22-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 SCD_RS12655 854525b82de47c28afd7b2dab9d47042 870 Pfam PF04453 Organic solvent tolerance protein 403 778 1.8E-90 T 22-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 SCD_RS12655 854525b82de47c28afd7b2dab9d47042 870 PANTHER PTHR30189 180 813 6.6E-61 T 22-04-2016 SCD_RS06460 239c7a8002d58f27a672fb820f42d9e4 99 SUPERFAMILY SSF143011 2 94 7.45E-5 T 22-04-2016 SCD_RS06460 239c7a8002d58f27a672fb820f42d9e4 99 PANTHER PTHR33755 1 99 2.3E-32 T 22-04-2016 SCD_RS06460 239c7a8002d58f27a672fb820f42d9e4 99 PANTHER PTHR33755:SF7 1 99 2.3E-32 T 22-04-2016 SCD_RS06460 239c7a8002d58f27a672fb820f42d9e4 99 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 96 5.6E-18 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SCD_RS04560 377f03f46696d0a23db94802c5e84f8c 268 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 4 266 1.7E-95 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SCD_RS04560 377f03f46696d0a23db94802c5e84f8c 268 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 4 266 35.215 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SCD_RS04560 377f03f46696d0a23db94802c5e84f8c 268 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 129 265 1.6E-43 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SCD_RS04560 377f03f46696d0a23db94802c5e84f8c 268 PIRSF PIRSF000161 2 268 1.8E-85 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SCD_RS04560 377f03f46696d0a23db94802c5e84f8c 268 Gene3D G3DSA:3.40.50.720 4 164 4.2E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS04560 377f03f46696d0a23db94802c5e84f8c 268 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 5 126 1.3E-35 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SCD_RS04560 377f03f46696d0a23db94802c5e84f8c 268 PANTHER PTHR20836 1 267 2.0E-92 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SCD_RS04560 377f03f46696d0a23db94802c5e84f8c 268 SUPERFAMILY SSF55347 128 237 8.5E-39 T 22-04-2016 SCD_RS04560 377f03f46696d0a23db94802c5e84f8c 268 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 151 168 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SCD_RS04560 377f03f46696d0a23db94802c5e84f8c 268 SUPERFAMILY SSF51735 237 267 1.28E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS04560 377f03f46696d0a23db94802c5e84f8c 268 SUPERFAMILY SSF51735 4 127 1.28E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS01845 95a5d804ac6831db7d280a1883007af2 348 Gene3D G3DSA:1.10.10.10 195 228 8.5E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS01845 95a5d804ac6831db7d280a1883007af2 348 PANTHER PTHR30154:SF27 167 329 9.5E-49 T 22-04-2016 SCD_RS01845 95a5d804ac6831db7d280a1883007af2 348 PANTHER PTHR30154 167 329 9.5E-49 T 22-04-2016 SCD_RS07800 27a89839d4606b477104d2a21550d696 230 Gene3D G3DSA:3.40.50.300 15 228 7.0E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07800 27a89839d4606b477104d2a21550d696 230 PANTHER PTHR24220 11 228 1.4E-92 T 22-04-2016 SCD_RS07800 27a89839d4606b477104d2a21550d696 230 SMART SM00382 38 226 2.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS07800 27a89839d4606b477104d2a21550d696 230 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS07800 27a89839d4606b477104d2a21550d696 230 SUPERFAMILY SSF52540 11 227 5.32E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07800 27a89839d4606b477104d2a21550d696 230 PANTHER PTHR24220:SF509 11 228 1.4E-92 T 22-04-2016 SCD_RS07800 27a89839d4606b477104d2a21550d696 230 Pfam PF00005 ABC transporter 29 175 4.6E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS06265 b3d97a8cc57ce24ed1d8aa07b69334c7 694 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 18 689 5.6E-274 T 22-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 SCD_RS06265 b3d97a8cc57ce24ed1d8aa07b69334c7 694 PANTHER PTHR30161 1 693 0.0 T 22-04-2016 SCD_RS06265 b3d97a8cc57ce24ed1d8aa07b69334c7 694 PANTHER PTHR30161:SF1 1 693 0.0 T 22-04-2016 SCD_RS06265 b3d97a8cc57ce24ed1d8aa07b69334c7 694 Pfam PF00771 FHIPEP family 28 681 1.7E-272 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SCD_RS06265 b3d97a8cc57ce24ed1d8aa07b69334c7 694 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 239 253 1.6E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SCD_RS06265 b3d97a8cc57ce24ed1d8aa07b69334c7 694 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 139 155 1.6E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SCD_RS06265 b3d97a8cc57ce24ed1d8aa07b69334c7 694 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 158 176 1.6E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SCD_RS06265 b3d97a8cc57ce24ed1d8aa07b69334c7 694 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 188 205 1.6E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SCD_RS06265 b3d97a8cc57ce24ed1d8aa07b69334c7 694 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 72 91 1.6E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SCD_RS06265 b3d97a8cc57ce24ed1d8aa07b69334c7 694 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 35 48 1.6E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SCD_RS06265 b3d97a8cc57ce24ed1d8aa07b69334c7 694 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 144 167 - T 22-04-2016 IPR025505 FHIPEP conserved site SCD_RS06265 b3d97a8cc57ce24ed1d8aa07b69334c7 694 PIRSF PIRSF005419 13 692 1.9E-248 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SCD_RS02240 5731d28fdde0c8f3c365cafbb0359221 138 Gene3D G3DSA:1.20.120.520 20 130 5.6E-10 T 22-04-2016 SCD_RS02240 5731d28fdde0c8f3c365cafbb0359221 138 Pfam PF01814 Hemerythrin HHE cation binding domain 12 121 2.3E-11 T 22-04-2016 IPR012312 Haemerythrin-like SCD_RS05015 5d4637b7670a55a3348e00615ddbdf51 70 Pfam PF01402 Ribbon-helix-helix protein, copG family 6 40 6.6E-6 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 SCD_RS07240 59a7edc0a29ad0716c18c571a2e2f9bf 530 Pfam PF08447 PAS fold 30 112 9.5E-17 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SCD_RS07240 59a7edc0a29ad0716c18c571a2e2f9bf 530 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 113 3.5E-14 T 22-04-2016 IPR000014 PAS domain SCD_RS07240 59a7edc0a29ad0716c18c571a2e2f9bf 530 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 393 422 1.2E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SCD_RS07240 59a7edc0a29ad0716c18c571a2e2f9bf 530 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 287 316 1.2E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SCD_RS07240 59a7edc0a29ad0716c18c571a2e2f9bf 530 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 364 391 1.2E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SCD_RS07240 59a7edc0a29ad0716c18c571a2e2f9bf 530 PANTHER PTHR32089 44 530 7.0E-117 T 22-04-2016 SCD_RS07240 59a7edc0a29ad0716c18c571a2e2f9bf 530 SUPERFAMILY SSF58104 219 527 3.27E-74 T 22-04-2016 SCD_RS07240 59a7edc0a29ad0716c18c571a2e2f9bf 530 SMART SM00086 79 120 1.0E-4 T 22-04-2016 IPR001610 PAC motif SCD_RS07240 59a7edc0a29ad0716c18c571a2e2f9bf 530 SMART SM00283 266 527 1.3E-78 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SCD_RS07240 59a7edc0a29ad0716c18c571a2e2f9bf 530 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 526 9.0E-52 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SCD_RS07240 59a7edc0a29ad0716c18c571a2e2f9bf 530 Gene3D G3DSA:3.30.450.20 19 113 6.4E-26 T 22-04-2016 SCD_RS07240 59a7edc0a29ad0716c18c571a2e2f9bf 530 Gene3D G3DSA:1.10.287.950 281 496 6.0E-57 T 22-04-2016 SCD_RS07240 59a7edc0a29ad0716c18c571a2e2f9bf 530 SUPERFAMILY SSF55785 19 113 2.09E-28 T 22-04-2016 IPR000014 PAS domain SCD_RS09575 66a25469bcc790032ced7fe0f73f3115 852 PANTHER PTHR11468 496 783 4.2E-231 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SCD_RS09575 66a25469bcc790032ced7fe0f73f3115 852 PANTHER PTHR11468 58 475 4.2E-231 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SCD_RS09575 66a25469bcc790032ced7fe0f73f3115 852 Gene3D G3DSA:3.40.50.2000 418 721 3.4E-72 T 22-04-2016 SCD_RS09575 66a25469bcc790032ced7fe0f73f3115 852 TIGRFAM TIGR02094 more_P_ylases: alpha-glucan phosphorylases 111 711 1.1E-248 T 22-04-2016 IPR011834 Alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SCD_RS09575 66a25469bcc790032ced7fe0f73f3115 852 Gene3D G3DSA:3.40.50.2000 26 417 3.2E-70 T 22-04-2016 SCD_RS09575 66a25469bcc790032ced7fe0f73f3115 852 SUPERFAMILY SSF53756 25 713 4.08E-192 T 22-04-2016 SCD_RS09575 66a25469bcc790032ced7fe0f73f3115 852 PANTHER PTHR11468:SF9 496 783 4.2E-231 T 22-04-2016 SCD_RS09575 66a25469bcc790032ced7fe0f73f3115 852 PANTHER PTHR11468:SF9 58 475 4.2E-231 T 22-04-2016 SCD_RS09575 66a25469bcc790032ced7fe0f73f3115 852 Pfam PF00343 Carbohydrate phosphorylase 275 623 1.6E-14 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SCD_RS09575 66a25469bcc790032ced7fe0f73f3115 852 Pfam PF11897 Protein of unknown function (DUF3417) 15 123 7.3E-31 T 22-04-2016 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SCD_RS09575 66a25469bcc790032ced7fe0f73f3115 852 PIRSF PIRSF000460 1 795 2.3E-260 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SCD_RS15670 9f839353a2d38cb2854643d4c996d503 124 Gene3D G3DSA:3.30.160.170 35 120 1.3E-20 T 22-04-2016 IPR005186 FlaG protein SCD_RS15670 9f839353a2d38cb2854643d4c996d503 124 Pfam PF03646 FlaG protein 29 121 4.2E-21 T 22-04-2016 IPR005186 FlaG protein SCD_RS15670 9f839353a2d38cb2854643d4c996d503 124 SUPERFAMILY SSF160214 46 124 9.81E-21 T 22-04-2016 IPR005186 FlaG protein SCD_RS15670 9f839353a2d38cb2854643d4c996d503 124 PANTHER PTHR37166:SF1 50 124 7.8E-15 T 22-04-2016 SCD_RS15670 9f839353a2d38cb2854643d4c996d503 124 PANTHER PTHR37166 50 124 7.8E-15 T 22-04-2016 SCD_RS13520 7422edadc262d3ce248bbc7506cbc9aa 154 PANTHER PTHR30009 4 147 1.5E-26 T 22-04-2016 SCD_RS13520 7422edadc262d3ce248bbc7506cbc9aa 154 PANTHER PTHR30009:SF7 4 147 1.5E-26 T 22-04-2016 SCD_RS13520 7422edadc262d3ce248bbc7506cbc9aa 154 Pfam PF03918 Cytochrome C biogenesis protein 7 147 1.4E-52 T 22-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family SCD_RS11895 e36502c5c0f2226991a69e1a6f25b90d 387 Gene3D G3DSA:2.40.50.100 64 96 6.2E-16 T 22-04-2016 SCD_RS11895 e36502c5c0f2226991a69e1a6f25b90d 387 Gene3D G3DSA:2.40.50.100 176 202 6.2E-16 T 22-04-2016 SCD_RS11895 e36502c5c0f2226991a69e1a6f25b90d 387 SUPERFAMILY SSF111369 53 287 5.1E-31 T 22-04-2016 SCD_RS11895 e36502c5c0f2226991a69e1a6f25b90d 387 Gene3D G3DSA:1.20.1600.10 102 175 4.7E-7 T 22-04-2016 SCD_RS11895 e36502c5c0f2226991a69e1a6f25b90d 387 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 283 3.4E-26 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SCD_RS11895 e36502c5c0f2226991a69e1a6f25b90d 387 PANTHER PTHR30572 4 305 8.0E-91 T 22-04-2016 SCD_RS11895 e36502c5c0f2226991a69e1a6f25b90d 387 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 307 7.2E-50 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SCD_RS11895 e36502c5c0f2226991a69e1a6f25b90d 387 PANTHER PTHR30572:SF1 4 305 8.0E-91 T 22-04-2016 SCD_RS11560 b2ca4416513ad07761eaa68fc6a951cb 279 PANTHER PTHR22726 50 258 1.3E-51 T 22-04-2016 SCD_RS11560 b2ca4416513ad07761eaa68fc6a951cb 279 PANTHER PTHR22726:SF9 50 258 1.3E-51 T 22-04-2016 SCD_RS11560 b2ca4416513ad07761eaa68fc6a951cb 279 Gene3D G3DSA:3.30.2010.10 73 156 3.7E-22 T 22-04-2016 SCD_RS11560 b2ca4416513ad07761eaa68fc6a951cb 279 Pfam PF01435 Peptidase family M48 77 256 1.7E-28 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SCD_RS11165 994d1281bdf141af211ff3f5e1b5af7a 106 Gene3D G3DSA:3.40.250.10 1 102 4.3E-28 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS11165 994d1281bdf141af211ff3f5e1b5af7a 106 SMART SM00450 6 101 2.3E-22 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS11165 994d1281bdf141af211ff3f5e1b5af7a 106 PANTHER PTHR10657:SF12 22 106 1.5E-17 T 22-04-2016 SCD_RS11165 994d1281bdf141af211ff3f5e1b5af7a 106 SUPERFAMILY SSF52821 2 98 2.23E-28 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS11165 994d1281bdf141af211ff3f5e1b5af7a 106 Pfam PF00581 Rhodanese-like domain 8 97 1.2E-17 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS11165 994d1281bdf141af211ff3f5e1b5af7a 106 PANTHER PTHR10657 22 106 1.5E-17 T 22-04-2016 SCD_RS06055 faab169d037f54f835bfbdceaa4ada0e 310 Gene3D G3DSA:3.40.50.2300 179 308 1.4E-25 T 22-04-2016 SCD_RS06055 faab169d037f54f835bfbdceaa4ada0e 310 SUPERFAMILY SSF50341 20 160 1.03E-35 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SCD_RS06055 faab169d037f54f835bfbdceaa4ada0e 310 PIRSF PIRSF002867 4 310 1.7E-101 T 22-04-2016 IPR024181 Chemotaxis response regulator CheV SCD_RS06055 faab169d037f54f835bfbdceaa4ada0e 310 PANTHER PTHR22617 1 164 5.6E-48 T 22-04-2016 SCD_RS06055 faab169d037f54f835bfbdceaa4ada0e 310 SMART SM00448 179 304 2.0E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS06055 faab169d037f54f835bfbdceaa4ada0e 310 Gene3D G3DSA:2.40.50.180 64 101 3.5E-7 T 22-04-2016 SCD_RS06055 faab169d037f54f835bfbdceaa4ada0e 310 Pfam PF01584 CheW-like domain 24 159 9.8E-40 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SCD_RS06055 faab169d037f54f835bfbdceaa4ada0e 310 PANTHER PTHR22617:SF37 1 164 5.6E-48 T 22-04-2016 SCD_RS06055 faab169d037f54f835bfbdceaa4ada0e 310 Gene3D G3DSA:2.30.30.40 102 134 5.7E-6 T 22-04-2016 SCD_RS06055 faab169d037f54f835bfbdceaa4ada0e 310 Pfam PF00072 Response regulator receiver domain 181 302 2.1E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS06055 faab169d037f54f835bfbdceaa4ada0e 310 SUPERFAMILY SSF52172 179 308 1.21E-22 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS06055 faab169d037f54f835bfbdceaa4ada0e 310 SMART SM00260 20 158 2.1E-33 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SCD_RS05705 f4555c1008df1d18ab8ef5b4af04f4e0 544 Gene3D G3DSA:1.10.710.10 482 490 9.4E-24 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SCD_RS05705 f4555c1008df1d18ab8ef5b4af04f4e0 544 Gene3D G3DSA:1.10.710.10 57 310 9.4E-24 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SCD_RS05705 f4555c1008df1d18ab8ef5b4af04f4e0 544 PIRSF PIRSF039014 1 544 2.5E-175 T 22-04-2016 IPR024673 Octaheme c-type cytochrome SCD_RS05705 f4555c1008df1d18ab8ef5b4af04f4e0 544 Pfam PF11783 Cytochrome c bacterial 319 491 5.6E-67 T 22-04-2016 IPR024673 Octaheme c-type cytochrome SCD_RS05705 f4555c1008df1d18ab8ef5b4af04f4e0 544 SUPERFAMILY SSF48695 45 495 1.01E-93 T 22-04-2016 IPR011031 Multihaem cytochrome SCD_RS05705 f4555c1008df1d18ab8ef5b4af04f4e0 544 TIGRFAM TIGR04315 octaheme_Shew: octaheme c-type cytochrome, tetrathionate reductase family 38 504 5.5E-189 T 22-04-2016 IPR024673 Octaheme c-type cytochrome SCD_RS05705 f4555c1008df1d18ab8ef5b4af04f4e0 544 Pfam PF13435 Cytochrome c554 and c-prime 59 138 0.0016 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SCD_RS15530 ad880aed157d93bf66b292227cb540df 450 SUPERFAMILY SSF56322 47 447 7.85E-80 T 22-04-2016 IPR005801 ADC synthase GO:0009058 SCD_RS15530 ad880aed157d93bf66b292227cb540df 450 PANTHER PTHR11236:SF3 124 446 1.8E-79 T 22-04-2016 SCD_RS15530 ad880aed157d93bf66b292227cb540df 450 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 111 446 6.8E-80 T 22-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 SCD_RS15530 ad880aed157d93bf66b292227cb540df 450 Pfam PF00425 chorismate binding enzyme 196 438 7.1E-62 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SCD_RS15530 ad880aed157d93bf66b292227cb540df 450 PANTHER PTHR11236 124 446 1.8E-79 T 22-04-2016 SCD_RS15530 ad880aed157d93bf66b292227cb540df 450 Gene3D G3DSA:3.60.120.10 75 447 3.8E-76 T 22-04-2016 IPR005801 ADC synthase GO:0009058 SCD_RS06905 95b415dffbb103faf7c28972be402b68 458 PANTHER PTHR22939 66 354 3.3E-128 T 22-04-2016 SCD_RS06905 95b415dffbb103faf7c28972be402b68 458 PANTHER PTHR22939 21 45 3.3E-128 T 22-04-2016 SCD_RS06905 95b415dffbb103faf7c28972be402b68 458 PANTHER PTHR22939:SF98 66 354 3.3E-128 T 22-04-2016 SCD_RS06905 95b415dffbb103faf7c28972be402b68 458 PANTHER PTHR22939:SF98 21 45 3.3E-128 T 22-04-2016 SCD_RS06905 95b415dffbb103faf7c28972be402b68 458 Gene3D G3DSA:2.40.10.10 150 260 7.0E-45 T 22-04-2016 SCD_RS06905 95b415dffbb103faf7c28972be402b68 458 SUPERFAMILY SSF50494 22 250 5.67E-69 T 22-04-2016 IPR009003 Peptidase S1, PA clan SCD_RS06905 95b415dffbb103faf7c28972be402b68 458 Gene3D G3DSA:2.40.10.10 23 147 9.9E-38 T 22-04-2016 SCD_RS06905 95b415dffbb103faf7c28972be402b68 458 SUPERFAMILY SSF50156 371 455 5.78E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS06905 95b415dffbb103faf7c28972be402b68 458 PRINTS PR00834 HtrA/DegQ protease family signature 191 208 1.9E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SCD_RS06905 95b415dffbb103faf7c28972be402b68 458 PRINTS PR00834 HtrA/DegQ protease family signature 213 230 1.9E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SCD_RS06905 95b415dffbb103faf7c28972be402b68 458 PRINTS PR00834 HtrA/DegQ protease family signature 157 181 1.9E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SCD_RS06905 95b415dffbb103faf7c28972be402b68 458 PRINTS PR00834 HtrA/DegQ protease family signature 299 311 1.9E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SCD_RS06905 95b415dffbb103faf7c28972be402b68 458 PRINTS PR00834 HtrA/DegQ protease family signature 117 137 1.9E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SCD_RS06905 95b415dffbb103faf7c28972be402b68 458 PRINTS PR00834 HtrA/DegQ protease family signature 96 108 1.9E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SCD_RS06905 95b415dffbb103faf7c28972be402b68 458 SUPERFAMILY SSF50156 217 341 1.25E-24 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS06905 95b415dffbb103faf7c28972be402b68 458 Pfam PF13365 Trypsin-like peptidase domain 87 220 1.5E-35 T 22-04-2016 SCD_RS06905 95b415dffbb103faf7c28972be402b68 458 Pfam PF13180 PDZ domain 259 348 8.7E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS06905 95b415dffbb103faf7c28972be402b68 458 Pfam PF13180 PDZ domain 392 449 1.6E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS06905 95b415dffbb103faf7c28972be402b68 458 Gene3D G3DSA:2.30.42.10 370 455 9.8E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS06905 95b415dffbb103faf7c28972be402b68 458 Gene3D G3DSA:2.30.42.10 261 358 2.5E-29 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS06905 95b415dffbb103faf7c28972be402b68 458 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 23 453 2.0E-155 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 SCD_RS06905 95b415dffbb103faf7c28972be402b68 458 SMART SM00228 370 448 8.1E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS06905 95b415dffbb103faf7c28972be402b68 458 SMART SM00228 259 341 7.6E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS03585 83b8fa146c01122172c1545ea700f063 247 PANTHER PTHR24567 7 233 5.0E-71 T 22-04-2016 SCD_RS03585 83b8fa146c01122172c1545ea700f063 247 SUPERFAMILY SSF51206 11 135 2.36E-11 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like SCD_RS03585 83b8fa146c01122172c1545ea700f063 247 SMART SM00100 12 130 5.0E-4 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SCD_RS03585 83b8fa146c01122172c1545ea700f063 247 PANTHER PTHR24567:SF22 7 233 5.0E-71 T 22-04-2016 SCD_RS03585 83b8fa146c01122172c1545ea700f063 247 Gene3D G3DSA:1.10.10.10 147 218 1.1E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS03585 83b8fa146c01122172c1545ea700f063 247 SUPERFAMILY SSF46785 147 222 2.14E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS03585 83b8fa146c01122172c1545ea700f063 247 Gene3D G3DSA:2.60.120.10 11 136 3.2E-9 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SCD_RS03585 83b8fa146c01122172c1545ea700f063 247 SMART SM00419 162 210 6.8E-5 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SCD_RS03585 83b8fa146c01122172c1545ea700f063 247 Pfam PF13545 Crp-like helix-turn-helix domain 150 216 3.3E-14 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SCD_RS15615 d690019a9cccd93d78df7e3cc6fd7127 322 PANTHER PTHR10799:SF750 95 297 1.9E-18 T 22-04-2016 SCD_RS15615 d690019a9cccd93d78df7e3cc6fd7127 322 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 293 8.3E-34 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15615 d690019a9cccd93d78df7e3cc6fd7127 322 Gene3D G3DSA:3.30.70.270 142 297 1.4E-41 T 22-04-2016 SCD_RS15615 d690019a9cccd93d78df7e3cc6fd7127 322 PANTHER PTHR10799 95 297 1.9E-18 T 22-04-2016 SCD_RS15615 d690019a9cccd93d78df7e3cc6fd7127 322 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 140 297 9.9E-37 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15615 d690019a9cccd93d78df7e3cc6fd7127 322 SUPERFAMILY SSF55073 145 297 4.39E-38 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS15615 d690019a9cccd93d78df7e3cc6fd7127 322 SMART SM00267 129 298 9.9E-49 T 22-04-2016 IPR000160 GGDEF domain SCD_RS12150 bbcc3bbfd2625b90963cc4fc228adf3f 127 Pfam PF01245 Ribosomal protein L19 3 115 8.9E-48 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS12150 bbcc3bbfd2625b90963cc4fc228adf3f 127 PANTHER PTHR15680 2 116 8.6E-55 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS12150 bbcc3bbfd2625b90963cc4fc228adf3f 127 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 116 30.795 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS12150 bbcc3bbfd2625b90963cc4fc228adf3f 127 ProSitePatterns PS01015 Ribosomal protein L19 signature. 88 103 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS12150 bbcc3bbfd2625b90963cc4fc228adf3f 127 SUPERFAMILY SSF50104 1 116 9.63E-46 T 22-04-2016 IPR008991 Translation protein SH3-like domain SCD_RS12150 bbcc3bbfd2625b90963cc4fc228adf3f 127 PRINTS PR00061 Ribosomal protein L19 signature 90 115 6.3E-36 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS12150 bbcc3bbfd2625b90963cc4fc228adf3f 127 PRINTS PR00061 Ribosomal protein L19 signature 6 35 6.3E-36 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS12150 bbcc3bbfd2625b90963cc4fc228adf3f 127 PRINTS PR00061 Ribosomal protein L19 signature 36 65 6.3E-36 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS12150 bbcc3bbfd2625b90963cc4fc228adf3f 127 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 115 1.5E-49 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS12150 bbcc3bbfd2625b90963cc4fc228adf3f 127 PIRSF PIRSF002191 1 126 4.6E-51 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS06090 e0feef557e1383faeda8d9f83bd5e2a3 201 PRINTS PR01003 Flagellar assembly protein FliH signature 50 68 4.7E-9 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 SCD_RS06090 e0feef557e1383faeda8d9f83bd5e2a3 201 PRINTS PR01003 Flagellar assembly protein FliH signature 27 49 4.7E-9 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 SCD_RS06090 e0feef557e1383faeda8d9f83bd5e2a3 201 PRINTS PR01003 Flagellar assembly protein FliH signature 126 153 4.7E-9 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 SCD_RS06090 e0feef557e1383faeda8d9f83bd5e2a3 201 PRINTS PR01003 Flagellar assembly protein FliH signature 171 196 4.7E-9 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 SCD_RS06090 e0feef557e1383faeda8d9f83bd5e2a3 201 PRINTS PR01003 Flagellar assembly protein FliH signature 154 170 4.7E-9 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 SCD_RS06090 e0feef557e1383faeda8d9f83bd5e2a3 201 PANTHER PTHR34982 36 193 1.2E-29 T 22-04-2016 SCD_RS06090 e0feef557e1383faeda8d9f83bd5e2a3 201 PANTHER PTHR34982:SF1 36 193 1.2E-29 T 22-04-2016 SCD_RS06090 e0feef557e1383faeda8d9f83bd5e2a3 201 Pfam PF02108 Flagellar assembly protein FliH 63 189 2.3E-40 T 22-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE SCD_RS02510 267fcef87b7f62d4a3571c9784ea2149 296 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 64 86 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site SCD_RS02510 267fcef87b7f62d4a3571c9784ea2149 296 PANTHER PTHR11048 3 286 1.4E-83 T 22-04-2016 SCD_RS02510 267fcef87b7f62d4a3571c9784ea2149 296 Pfam PF01040 UbiA prenyltransferase family 25 269 8.4E-65 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 SCD_RS02510 267fcef87b7f62d4a3571c9784ea2149 296 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 9 284 2.8E-104 T 22-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 SCD_RS02510 267fcef87b7f62d4a3571c9784ea2149 296 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 2 285 29.598 T 22-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 SCD_RS11500 29866ddc20fb7e98a16fb365a9891332 311 SUPERFAMILY SSF52374 12 298 5.04E-82 T 22-04-2016 SCD_RS11500 29866ddc20fb7e98a16fb365a9891332 311 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 12 303 43.587 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 SCD_RS11500 29866ddc20fb7e98a16fb365a9891332 311 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 12 283 3.4E-115 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 SCD_RS11500 29866ddc20fb7e98a16fb365a9891332 311 Gene3D G3DSA:3.40.50.620 12 76 6.0E-39 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS11500 29866ddc20fb7e98a16fb365a9891332 311 Gene3D G3DSA:3.40.50.620 185 233 6.0E-39 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS11500 29866ddc20fb7e98a16fb365a9891332 311 PANTHER PTHR11451:SF35 1 249 4.7E-99 T 22-04-2016 SCD_RS11500 29866ddc20fb7e98a16fb365a9891332 311 Gene3D G3DSA:3.90.800.10 77 183 3.1E-19 T 22-04-2016 SCD_RS11500 29866ddc20fb7e98a16fb365a9891332 311 PANTHER PTHR11451 1 249 4.7E-99 T 22-04-2016 SCD_RS11500 29866ddc20fb7e98a16fb365a9891332 311 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 13 252 1.9E-43 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 SCD_RS11500 29866ddc20fb7e98a16fb365a9891332 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 15 27 1.4E-12 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SCD_RS11500 29866ddc20fb7e98a16fb365a9891332 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 183 193 1.4E-12 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SCD_RS11500 29866ddc20fb7e98a16fb365a9891332 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 199 207 1.4E-12 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SCD_RS11500 29866ddc20fb7e98a16fb365a9891332 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 44 57 1.4E-12 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SCD_RS04790 f04b843dae68afaf3f84ddffd29b5316 109 Pfam PF14213 Domain of unknown function (DUF4325) 30 89 4.2E-13 T 22-04-2016 IPR025474 Domain of unknown function DUF4325 SCD_RS13580 98a1c588d389065f7b6563f6c9850f24 667 Gene3D G3DSA:1.10.710.10 253 326 1.1E-5 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SCD_RS13580 98a1c588d389065f7b6563f6c9850f24 667 Gene3D G3DSA:1.20.950.20 395 624 2.4E-44 T 22-04-2016 SCD_RS13580 98a1c588d389065f7b6563f6c9850f24 667 PANTHER PTHR35038 199 487 1.7E-22 T 22-04-2016 SCD_RS13580 98a1c588d389065f7b6563f6c9850f24 667 PANTHER PTHR35038:SF2 199 487 1.7E-22 T 22-04-2016 SCD_RS13580 98a1c588d389065f7b6563f6c9850f24 667 Pfam PF14522 Cytochrome c7 and related cytochrome c 36 116 4.5E-6 T 22-04-2016 SCD_RS13580 98a1c588d389065f7b6563f6c9850f24 667 Gene3D G3DSA:1.10.3820.10 9 168 5.9E-11 T 22-04-2016 SCD_RS13580 98a1c588d389065f7b6563f6c9850f24 667 Gene3D G3DSA:3.90.10.10 169 252 3.0E-7 T 22-04-2016 SCD_RS13580 98a1c588d389065f7b6563f6c9850f24 667 SUPERFAMILY SSF48695 41 115 2.51E-51 T 22-04-2016 IPR011031 Multihaem cytochrome SCD_RS13580 98a1c588d389065f7b6563f6c9850f24 667 SUPERFAMILY SSF48695 145 523 2.51E-51 T 22-04-2016 IPR011031 Multihaem cytochrome SCD_RS04550 12f5b9a36e36a453bc8f9c709dbecaf6 141 SUPERFAMILY SSF46785 5 133 1.91E-40 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS04550 12f5b9a36e36a453bc8f9c709dbecaf6 141 Pfam PF01475 Ferric uptake regulator family 10 128 2.9E-44 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SCD_RS04550 12f5b9a36e36a453bc8f9c709dbecaf6 141 Gene3D G3DSA:1.10.10.10 5 82 1.2E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS04550 12f5b9a36e36a453bc8f9c709dbecaf6 141 PANTHER PTHR33202 5 134 1.6E-40 T 22-04-2016 SCD_RS06380 f3e8c53189671d8c0bb5eaa6ef399339 320 PANTHER PTHR34351:SF1 11 315 2.8E-54 T 22-04-2016 SCD_RS06380 f3e8c53189671d8c0bb5eaa6ef399339 320 Pfam PF01882 Protein of unknown function DUF58 213 269 5.1E-13 T 22-04-2016 IPR002881 Domain of unknown function DUF58 SCD_RS06380 f3e8c53189671d8c0bb5eaa6ef399339 320 PANTHER PTHR34351 11 315 2.8E-54 T 22-04-2016 SCD_RS13130 3aecadee1a6335b80abafddfc3cdcceb 208 Pfam PF02630 SCO1/SenC 64 168 9.3E-10 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC SCD_RS13130 3aecadee1a6335b80abafddfc3cdcceb 208 PANTHER PTHR12151 5 203 5.3E-12 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC SCD_RS13130 3aecadee1a6335b80abafddfc3cdcceb 208 PANTHER PTHR12151:SF0 5 203 5.3E-12 T 22-04-2016 SCD_RS13130 3aecadee1a6335b80abafddfc3cdcceb 208 Gene3D G3DSA:3.40.30.10 30 203 1.1E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS13130 3aecadee1a6335b80abafddfc3cdcceb 208 SUPERFAMILY SSF52833 57 203 7.77E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS04565 5918abfb4d9059762ed89639035d6c37 376 SMART SM01097 5 135 1.2E-89 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SCD_RS04565 5918abfb4d9059762ed89639035d6c37 376 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 7 133 4.7E-52 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SCD_RS04565 5918abfb4d9059762ed89639035d6c37 376 Gene3D G3DSA:3.40.50.880 155 374 2.2E-81 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SCD_RS04565 5918abfb4d9059762ed89639035d6c37 376 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 5 376 48.112 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SCD_RS04565 5918abfb4d9059762ed89639035d6c37 376 Gene3D G3DSA:3.50.30.20 7 143 9.3E-61 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SCD_RS04565 5918abfb4d9059762ed89639035d6c37 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 231 245 1.5E-39 T 22-04-2016 SCD_RS04565 5918abfb4d9059762ed89639035d6c37 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 262 278 1.5E-39 T 22-04-2016 SCD_RS04565 5918abfb4d9059762ed89639035d6c37 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 192 206 1.5E-39 T 22-04-2016 SCD_RS04565 5918abfb4d9059762ed89639035d6c37 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 304 315 1.5E-39 T 22-04-2016 SCD_RS04565 5918abfb4d9059762ed89639035d6c37 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 279 296 1.5E-39 T 22-04-2016 SCD_RS04565 5918abfb4d9059762ed89639035d6c37 376 SUPERFAMILY SSF52317 158 374 9.47E-62 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SCD_RS04565 5918abfb4d9059762ed89639035d6c37 376 PRINTS PR00097 Anthranilate synthase component II signature 347 360 5.6E-5 T 22-04-2016 SCD_RS04565 5918abfb4d9059762ed89639035d6c37 376 PRINTS PR00097 Anthranilate synthase component II signature 234 243 5.6E-5 T 22-04-2016 SCD_RS04565 5918abfb4d9059762ed89639035d6c37 376 PRINTS PR00097 Anthranilate synthase component II signature 262 273 5.6E-5 T 22-04-2016 SCD_RS04565 5918abfb4d9059762ed89639035d6c37 376 PANTHER PTHR11405 5 376 1.2E-240 T 22-04-2016 SCD_RS04565 5918abfb4d9059762ed89639035d6c37 376 SUPERFAMILY SSF52021 7 149 9.15E-57 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SCD_RS04565 5918abfb4d9059762ed89639035d6c37 376 Pfam PF00117 Glutamine amidotransferase class-I 195 369 6.8E-48 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SCD_RS04565 5918abfb4d9059762ed89639035d6c37 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 262 273 1.5E-10 T 22-04-2016 SCD_RS04565 5918abfb4d9059762ed89639035d6c37 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 234 243 1.5E-10 T 22-04-2016 SCD_RS04565 5918abfb4d9059762ed89639035d6c37 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 347 360 1.5E-10 T 22-04-2016 SCD_RS04565 5918abfb4d9059762ed89639035d6c37 376 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 7 373 6.0E-149 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SCD_RS12740 4e33dba1f01d2f9107206f94cda8441a 208 PANTHER PTHR35802 2 201 1.0E-56 T 22-04-2016 SCD_RS12740 4e33dba1f01d2f9107206f94cda8441a 208 PANTHER PTHR35802:SF1 2 201 1.0E-56 T 22-04-2016 SCD_RS12740 4e33dba1f01d2f9107206f94cda8441a 208 SUPERFAMILY SSF50475 10 183 4.19E-39 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SCD_RS12740 4e33dba1f01d2f9107206f94cda8441a 208 PIRSF PIRSF010372 1 206 7.6E-64 T 22-04-2016 IPR007396 Transcriptional regulator PAI 2-type SCD_RS12740 4e33dba1f01d2f9107206f94cda8441a 208 Gene3D G3DSA:2.30.110.10 1 201 6.8E-66 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SCD_RS12740 4e33dba1f01d2f9107206f94cda8441a 208 Pfam PF04299 Putative FMN-binding domain 1 161 1.0E-53 T 22-04-2016 IPR007396 Transcriptional regulator PAI 2-type SCD_RS00895 6d838403275f24621a702afd4a80013e 156 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 6.5E-22 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SCD_RS00895 6d838403275f24621a702afd4a80013e 156 Gene3D G3DSA:1.10.10.10 4 55 4.4E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS00895 6d838403275f24621a702afd4a80013e 156 SMART SM00344 3 113 6.3E-44 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 SCD_RS00895 6d838403275f24621a702afd4a80013e 156 PANTHER PTHR30154 1 153 2.0E-74 T 22-04-2016 SCD_RS00895 6d838403275f24621a702afd4a80013e 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 49 3.6E-21 T 22-04-2016 SCD_RS00895 6d838403275f24621a702afd4a80013e 156 SUPERFAMILY SSF54909 63 153 1.31E-18 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel SCD_RS00895 6d838403275f24621a702afd4a80013e 156 SUPERFAMILY SSF46785 2 63 6.53E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS00895 6d838403275f24621a702afd4a80013e 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 3.6E-19 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SCD_RS00895 6d838403275f24621a702afd4a80013e 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 3.6E-19 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SCD_RS00895 6d838403275f24621a702afd4a80013e 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 3.6E-19 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SCD_RS00895 6d838403275f24621a702afd4a80013e 156 PANTHER PTHR30154:SF19 1 153 2.0E-74 T 22-04-2016 SCD_RS00895 6d838403275f24621a702afd4a80013e 156 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site SCD_RS00895 6d838403275f24621a702afd4a80013e 156 Gene3D G3DSA:3.30.70.920 56 141 3.3E-26 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SCD_RS05085 1512fd9e9abfadb6dca6f6d6abc1cbe4 360 PANTHER PTHR21152:SF1 1 360 1.5E-189 T 22-04-2016 SCD_RS05085 1512fd9e9abfadb6dca6f6d6abc1cbe4 360 Gene3D G3DSA:3.40.640.10 17 256 1.3E-112 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS05085 1512fd9e9abfadb6dca6f6d6abc1cbe4 360 Gene3D G3DSA:3.90.1150.10 258 359 9.5E-43 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS05085 1512fd9e9abfadb6dca6f6d6abc1cbe4 360 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 359 52.305 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 SCD_RS05085 1512fd9e9abfadb6dca6f6d6abc1cbe4 360 PIRSF PIRSF000525 1 360 2.6E-157 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 SCD_RS05085 1512fd9e9abfadb6dca6f6d6abc1cbe4 360 PANTHER PTHR21152 1 360 1.5E-189 T 22-04-2016 SCD_RS05085 1512fd9e9abfadb6dca6f6d6abc1cbe4 360 Pfam PF00266 Aminotransferase class-V 4 348 3.1E-57 T 22-04-2016 IPR000192 Aminotransferase class V domain SCD_RS05085 1512fd9e9abfadb6dca6f6d6abc1cbe4 360 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 359 2.5E-162 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 SCD_RS05085 1512fd9e9abfadb6dca6f6d6abc1cbe4 360 SUPERFAMILY SSF53383 1 358 5.17E-122 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS05100 c9d7e8bfdc96e1937b0d4c61ef119194 338 PANTHER PTHR21057:SF1 2 336 1.1E-167 T 22-04-2016 SCD_RS05100 c9d7e8bfdc96e1937b0d4c61ef119194 338 PANTHER PTHR21057 2 336 1.1E-167 T 22-04-2016 SCD_RS05100 c9d7e8bfdc96e1937b0d4c61ef119194 338 SUPERFAMILY SSF51569 1 336 1.19E-115 T 22-04-2016 SCD_RS05100 c9d7e8bfdc96e1937b0d4c61ef119194 338 Pfam PF00793 DAHP synthetase I family 91 322 3.4E-69 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SCD_RS05100 c9d7e8bfdc96e1937b0d4c61ef119194 338 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 72 327 4.9E-112 T 22-04-2016 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SCD_RS05100 c9d7e8bfdc96e1937b0d4c61ef119194 338 Gene3D G3DSA:3.20.20.70 73 336 6.9E-100 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS05100 c9d7e8bfdc96e1937b0d4c61ef119194 338 Gene3D G3DSA:3.30.70.1140 1 70 8.6E-28 T 22-04-2016 SCD_RS00960 05a203a58db9aa093f826dc314f7226b 469 Gene3D G3DSA:3.30.590.10 106 456 4.4E-138 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 SCD_RS00960 05a203a58db9aa093f826dc314f7226b 469 Gene3D G3DSA:3.10.20.70 4 105 2.0E-37 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SCD_RS00960 05a203a58db9aa093f826dc314f7226b 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 22-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SCD_RS00960 05a203a58db9aa093f826dc314f7226b 469 SMART SM01230 102 379 1.3E-150 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SCD_RS00960 05a203a58db9aa093f826dc314f7226b 469 SUPERFAMILY SSF54368 4 100 5.62E-34 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SCD_RS00960 05a203a58db9aa093f826dc314f7226b 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SCD_RS00960 05a203a58db9aa093f826dc314f7226b 469 PANTHER PTHR20852:SF15 1 138 2.3E-260 T 22-04-2016 SCD_RS00960 05a203a58db9aa093f826dc314f7226b 469 PANTHER PTHR20852:SF15 160 469 2.3E-260 T 22-04-2016 SCD_RS00960 05a203a58db9aa093f826dc314f7226b 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SCD_RS00960 05a203a58db9aa093f826dc314f7226b 469 PANTHER PTHR20852 1 138 2.3E-260 T 22-04-2016 SCD_RS00960 05a203a58db9aa093f826dc314f7226b 469 PANTHER PTHR20852 160 469 2.3E-260 T 22-04-2016 SCD_RS00960 05a203a58db9aa093f826dc314f7226b 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 2.9E-138 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SCD_RS00960 05a203a58db9aa093f826dc314f7226b 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 5 468 1.0E-199 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SCD_RS00960 05a203a58db9aa093f826dc314f7226b 469 SUPERFAMILY SSF55931 102 468 1.47E-138 T 22-04-2016 SCD_RS00960 05a203a58db9aa093f826dc314f7226b 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 2.1E-27 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SCD_RS04690 582d633c86069295670647999e597b13 157 PIRSF PIRSF000216 1 157 2.5E-58 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 SCD_RS04690 582d633c86069295670647999e597b13 157 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 11 156 2.8E-51 T 22-04-2016 SCD_RS04690 582d633c86069295670647999e597b13 157 Gene3D G3DSA:3.40.30.10 76 153 2.5E-8 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS04690 582d633c86069295670647999e597b13 157 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 113 131 - T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 SCD_RS04690 582d633c86069295670647999e597b13 157 PANTHER PTHR10371 2 157 1.1E-63 T 22-04-2016 SCD_RS04690 582d633c86069295670647999e597b13 157 SUPERFAMILY SSF52833 2 156 3.13E-53 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS04690 582d633c86069295670647999e597b13 157 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 9 156 1.5E-57 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 SCD_RS12780 2768133684cc86b842f3d179d7ace325 382 SMART SM00387 280 382 4.0E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS12780 2768133684cc86b842f3d179d7ace325 382 PANTHER PTHR24423 1 23 2.2E-50 T 22-04-2016 SCD_RS12780 2768133684cc86b842f3d179d7ace325 382 PANTHER PTHR24423 111 378 2.2E-50 T 22-04-2016 SCD_RS12780 2768133684cc86b842f3d179d7ace325 382 Gene3D G3DSA:1.10.287.130 163 224 1.7E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS12780 2768133684cc86b842f3d179d7ace325 382 SUPERFAMILY SSF47384 154 234 4.51E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS12780 2768133684cc86b842f3d179d7ace325 382 SMART SM00388 171 237 7.1E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS12780 2768133684cc86b842f3d179d7ace325 382 SUPERFAMILY SSF55874 234 378 1.44E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS12780 2768133684cc86b842f3d179d7ace325 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 326 2.7E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS12780 2768133684cc86b842f3d179d7ace325 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 340 2.7E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS12780 2768133684cc86b842f3d179d7ace325 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 360 2.7E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS12780 2768133684cc86b842f3d179d7ace325 382 Pfam PF00512 His Kinase A (phospho-acceptor) domain 173 235 6.8E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS12780 2768133684cc86b842f3d179d7ace325 382 Pfam PF00672 HAMP domain 98 166 8.7E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS12780 2768133684cc86b842f3d179d7ace325 382 Gene3D G3DSA:3.30.565.10 225 376 1.8E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS12780 2768133684cc86b842f3d179d7ace325 382 SMART SM00304 117 170 0.005 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS12780 2768133684cc86b842f3d179d7ace325 382 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 285 376 1.0E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS01405 554fb6d93f04f61db5b7eb5346809bc3 244 PANTHER PTHR10108 2 244 1.2E-146 T 22-04-2016 SCD_RS01405 554fb6d93f04f61db5b7eb5346809bc3 244 Pfam PF01209 ubiE/COQ5 methyltransferase family 16 243 2.7E-86 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SCD_RS01405 554fb6d93f04f61db5b7eb5346809bc3 244 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 152 166 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SCD_RS01405 554fb6d93f04f61db5b7eb5346809bc3 244 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 12 243 37.163 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SCD_RS01405 554fb6d93f04f61db5b7eb5346809bc3 244 PANTHER PTHR10108:SF864 2 244 1.2E-146 T 22-04-2016 SCD_RS01405 554fb6d93f04f61db5b7eb5346809bc3 244 SUPERFAMILY SSF53335 14 241 7.88E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS01405 554fb6d93f04f61db5b7eb5346809bc3 244 Gene3D G3DSA:3.40.50.150 19 239 1.0E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS01405 554fb6d93f04f61db5b7eb5346809bc3 244 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 32 47 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SCD_RS01405 554fb6d93f04f61db5b7eb5346809bc3 244 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 21 243 1.8E-76 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SCD_RS05445 690636abbb3fc85f8208169247457c8a 228 PANTHER PTHR12677 34 226 1.8E-46 T 22-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 SCD_RS05445 690636abbb3fc85f8208169247457c8a 228 PANTHER PTHR12677:SF26 34 226 1.8E-46 T 22-04-2016 SCD_RS05445 690636abbb3fc85f8208169247457c8a 228 Pfam PF09335 SNARE associated Golgi protein 70 187 1.2E-21 T 22-04-2016 IPR032816 SNARE associated Golgi protein SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 Gene3D G3DSA:1.10.1060.10 28 153 1.4E-21 T 22-04-2016 SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 Gene3D G3DSA:1.10.1060.10 575 665 2.4E-13 T 22-04-2016 SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 Gene3D G3DSA:3.40.50.720 154 240 1.5E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 Gene3D G3DSA:3.40.50.720 418 496 1.5E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 Gene3D G3DSA:3.50.50.60 241 304 7.2E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 Gene3D G3DSA:3.50.50.60 319 417 1.5E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 PANTHER PTHR11938 333 479 4.5E-69 T 22-04-2016 SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 PANTHER PTHR11938 51 301 4.5E-69 T 22-04-2016 SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 SUPERFAMILY SSF46548 49 161 1.1E-15 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 648 659 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 612 623 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 SUPERFAMILY SSF54862 52 72 3.56E-15 T 22-04-2016 SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 SUPERFAMILY SSF54862 578 665 3.56E-15 T 22-04-2016 SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 SUPERFAMILY SSF51971 150 303 1.06E-58 T 22-04-2016 SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 SUPERFAMILY SSF51971 335 418 1.06E-58 T 22-04-2016 SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 Pfam PF12838 4Fe-4S dicluster domain 612 661 4.3E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 PANTHER PTHR11938:SF99 333 479 4.5E-69 T 22-04-2016 SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 PANTHER PTHR11938:SF99 51 301 4.5E-69 T 22-04-2016 SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 PRINTS PR00419 Adrenodoxin reductase family signature 283 297 2.8E-18 T 22-04-2016 SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 PRINTS PR00419 Adrenodoxin reductase family signature 152 174 2.8E-18 T 22-04-2016 SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 PRINTS PR00419 Adrenodoxin reductase family signature 175 188 2.8E-18 T 22-04-2016 SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 PRINTS PR00419 Adrenodoxin reductase family signature 217 227 2.8E-18 T 22-04-2016 SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 35 136 1.5E-11 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II SCD_RS13405 c50903cd6761b57cbf0c2d5f60f61535 669 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 151 468 5.1E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS05400 9fc80964d6c5e7bbffc08dd0127c60c5 297 Gene3D G3DSA:3.30.420.40 132 276 6.1E-51 T 22-04-2016 SCD_RS05400 9fc80964d6c5e7bbffc08dd0127c60c5 297 SUPERFAMILY SSF53067 3 296 1.05E-61 T 22-04-2016 SCD_RS05400 9fc80964d6c5e7bbffc08dd0127c60c5 297 ProSitePatterns PS01125 ROK family signature. 130 157 - T 22-04-2016 IPR000600 ROK family SCD_RS05400 9fc80964d6c5e7bbffc08dd0127c60c5 297 Gene3D G3DSA:3.30.420.40 3 131 1.2E-36 T 22-04-2016 SCD_RS05400 9fc80964d6c5e7bbffc08dd0127c60c5 297 PANTHER PTHR18964:SF134 1 296 5.6E-95 T 22-04-2016 SCD_RS05400 9fc80964d6c5e7bbffc08dd0127c60c5 297 Pfam PF00480 ROK family 3 296 1.2E-80 T 22-04-2016 IPR000600 ROK family SCD_RS05400 9fc80964d6c5e7bbffc08dd0127c60c5 297 PANTHER PTHR18964 1 296 5.6E-95 T 22-04-2016 SCD_RS10600 72e47377a98c89ce08aba5d28a32f375 222 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 215 1.7E-42 T 22-04-2016 SCD_RS10600 72e47377a98c89ce08aba5d28a32f375 222 PANTHER PTHR23291 16 222 2.8E-83 T 22-04-2016 IPR006214 Bax inhibitor 1-related SCD_RS10600 72e47377a98c89ce08aba5d28a32f375 222 PANTHER PTHR23291:SF37 16 222 2.8E-83 T 22-04-2016 SCD_RS07270 ae7ac7051f92ce4240f7d40a04802b88 129 Pfam PF00072 Response regulator receiver domain 8 120 8.8E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS07270 ae7ac7051f92ce4240f7d40a04802b88 129 PANTHER PTHR26402:SF434 6 124 4.6E-34 T 22-04-2016 SCD_RS07270 ae7ac7051f92ce4240f7d40a04802b88 129 Gene3D G3DSA:3.40.50.2300 4 123 4.7E-35 T 22-04-2016 SCD_RS07270 ae7ac7051f92ce4240f7d40a04802b88 129 PANTHER PTHR26402 6 124 4.6E-34 T 22-04-2016 SCD_RS07270 ae7ac7051f92ce4240f7d40a04802b88 129 SMART SM00448 6 120 1.3E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS07270 ae7ac7051f92ce4240f7d40a04802b88 129 SUPERFAMILY SSF52172 7 124 3.84E-34 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS06125 626ddc8b7108b3ad9537ce80be911ee5 153 Pfam PF04347 Flagellar biosynthesis protein, FliO 63 146 2.3E-22 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 SCD_RS06125 626ddc8b7108b3ad9537ce80be911ee5 153 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 51 118 7.4E-23 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 SCD_RS06125 626ddc8b7108b3ad9537ce80be911ee5 153 PANTHER PTHR38766 9 122 7.8E-16 T 22-04-2016 SCD_RS06125 626ddc8b7108b3ad9537ce80be911ee5 153 PANTHER PTHR38766:SF1 9 122 7.8E-16 T 22-04-2016 SCD_RS08570 4954c52fce7d3f79be41b366fc1cd8d4 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 1.6E-11 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SCD_RS08570 4954c52fce7d3f79be41b366fc1cd8d4 200 PIRSF PIRSF000239 1 199 1.4E-61 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 SCD_RS08570 4954c52fce7d3f79be41b366fc1cd8d4 200 SUPERFAMILY SSF52833 3 196 3.59E-67 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS08570 4954c52fce7d3f79be41b366fc1cd8d4 200 Gene3D G3DSA:3.40.30.10 5 161 4.1E-62 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS08570 4954c52fce7d3f79be41b366fc1cd8d4 200 Gene3D G3DSA:3.30.1020.10 162 195 1.1E-14 T 22-04-2016 SCD_RS08570 4954c52fce7d3f79be41b366fc1cd8d4 200 Pfam PF00578 AhpC/TSA family 5 139 6.4E-34 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SCD_RS08570 4954c52fce7d3f79be41b366fc1cd8d4 200 PANTHER PTHR10681 1 196 1.1E-85 T 22-04-2016 SCD_RS14240 00a1101970203199987b52b3df89d2c7 373 PANTHER PTHR30244 1 372 2.7E-132 T 22-04-2016 SCD_RS14240 00a1101970203199987b52b3df89d2c7 373 PIRSF PIRSF000390 1 373 4.5E-105 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SCD_RS14240 00a1101970203199987b52b3df89d2c7 373 SUPERFAMILY SSF53383 3 368 2.21E-111 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS14240 00a1101970203199987b52b3df89d2c7 373 Gene3D G3DSA:3.40.640.10 4 244 8.2E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS14240 00a1101970203199987b52b3df89d2c7 373 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 15 365 1.6E-108 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SCD_RS14240 00a1101970203199987b52b3df89d2c7 373 Gene3D G3DSA:3.90.1150.10 245 370 7.9E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS14240 00a1101970203199987b52b3df89d2c7 373 PANTHER PTHR30244:SF16 1 372 2.7E-132 T 22-04-2016 SCD_RS10520 9ad313262435bb6ea17477c1b2962f49 388 Pfam PF16074 Type IV Pilus-assembly protein W 248 382 4.9E-10 T 22-04-2016 IPR032092 Type IV Pilus-assembly protein W GO:0043683 SCD_RS10520 9ad313262435bb6ea17477c1b2962f49 388 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 32 3.9E-4 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS10520 9ad313262435bb6ea17477c1b2962f49 388 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS08345 72f26ccecd301e9c3dd4cfbd2f8c13e1 460 Pfam PF02321 Outer membrane efflux protein 59 249 1.1E-24 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SCD_RS08345 72f26ccecd301e9c3dd4cfbd2f8c13e1 460 Pfam PF02321 Outer membrane efflux protein 273 457 1.5E-30 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SCD_RS08345 72f26ccecd301e9c3dd4cfbd2f8c13e1 460 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 8 459 5.2E-123 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 SCD_RS08345 72f26ccecd301e9c3dd4cfbd2f8c13e1 460 PANTHER PTHR30203:SF15 5 460 3.7E-140 T 22-04-2016 SCD_RS08345 72f26ccecd301e9c3dd4cfbd2f8c13e1 460 Gene3D G3DSA:1.20.1600.10 48 85 7.9E-99 T 22-04-2016 SCD_RS08345 72f26ccecd301e9c3dd4cfbd2f8c13e1 460 Gene3D G3DSA:1.20.1600.10 137 308 7.9E-99 T 22-04-2016 SCD_RS08345 72f26ccecd301e9c3dd4cfbd2f8c13e1 460 Gene3D G3DSA:1.20.1600.10 346 459 7.9E-99 T 22-04-2016 SCD_RS08345 72f26ccecd301e9c3dd4cfbd2f8c13e1 460 SUPERFAMILY SSF56954 1 459 4.71E-111 T 22-04-2016 SCD_RS08345 72f26ccecd301e9c3dd4cfbd2f8c13e1 460 PANTHER PTHR30203 5 460 3.7E-140 T 22-04-2016 SCD_RS08345 72f26ccecd301e9c3dd4cfbd2f8c13e1 460 Gene3D G3DSA:2.20.200.10 309 344 9.2E-21 T 22-04-2016 SCD_RS08345 72f26ccecd301e9c3dd4cfbd2f8c13e1 460 Gene3D G3DSA:2.20.200.10 95 136 9.2E-21 T 22-04-2016 SCD_RS01715 da808eaf075b2981206e4c78eddacb37 169 Gene3D G3DSA:3.40.30.10 4 169 1.3E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS01715 da808eaf075b2981206e4c78eddacb37 169 PANTHER PTHR10681:SF125 37 159 3.2E-22 T 22-04-2016 SCD_RS01715 da808eaf075b2981206e4c78eddacb37 169 ProSitePatterns PS00194 Thioredoxin family active site. 57 75 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SCD_RS01715 da808eaf075b2981206e4c78eddacb37 169 SUPERFAMILY SSF52833 4 168 4.95E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS01715 da808eaf075b2981206e4c78eddacb37 169 Pfam PF00578 AhpC/TSA family 30 150 2.8E-20 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SCD_RS01715 da808eaf075b2981206e4c78eddacb37 169 PANTHER PTHR10681 37 159 3.2E-22 T 22-04-2016 SCD_RS06275 57cbd2445a8e1bf290258b65543fa261 299 Gene3D G3DSA:3.40.50.300 28 287 3.8E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06275 57cbd2445a8e1bf290258b65543fa261 299 PIRSF PIRSF003092 11 292 2.2E-68 T 22-04-2016 IPR025501 ATP binding protein MinD SCD_RS06275 57cbd2445a8e1bf290258b65543fa261 299 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 29 220 4.8E-17 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SCD_RS06275 57cbd2445a8e1bf290258b65543fa261 299 PANTHER PTHR13696:SF3 7 278 3.8E-67 T 22-04-2016 SCD_RS06275 57cbd2445a8e1bf290258b65543fa261 299 PANTHER PTHR13696 7 278 3.8E-67 T 22-04-2016 SCD_RS06275 57cbd2445a8e1bf290258b65543fa261 299 SUPERFAMILY SSF52540 27 286 1.84E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12320 5e2ebe4fb9c8d69becbe75295e36c1cd 94 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 1 84 2.7E-27 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 SCD_RS12320 5e2ebe4fb9c8d69becbe75295e36c1cd 94 PANTHER PTHR37479 3 87 1.4E-22 T 22-04-2016 SCD_RS12320 5e2ebe4fb9c8d69becbe75295e36c1cd 94 Hamap MF_00910 Cell division protein FtsL [ftsL]. 1 84 16.524 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 SCD_RS12320 5e2ebe4fb9c8d69becbe75295e36c1cd 94 Pfam PF04999 Cell division protein FtsL 3 86 8.0E-23 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 SCD_RS12320 5e2ebe4fb9c8d69becbe75295e36c1cd 94 PANTHER PTHR37479:SF1 3 87 1.4E-22 T 22-04-2016 SCD_RS03990 6aa1e001e2e911bf7d6409cf3b43f0c1 350 Gene3D G3DSA:3.30.390.50 263 345 1.0E-5 T 22-04-2016 SCD_RS03990 6aa1e001e2e911bf7d6409cf3b43f0c1 350 SUPERFAMILY SSF55681 4 249 2.91E-63 T 22-04-2016 SCD_RS03990 6aa1e001e2e911bf7d6409cf3b43f0c1 350 PANTHER PTHR12561:SF11 5 345 7.7E-97 T 22-04-2016 SCD_RS03990 6aa1e001e2e911bf7d6409cf3b43f0c1 350 Gene3D G3DSA:3.90.1550.10 2 249 4.6E-58 T 22-04-2016 SCD_RS03990 6aa1e001e2e911bf7d6409cf3b43f0c1 350 PANTHER PTHR12561 5 345 7.7E-97 T 22-04-2016 SCD_RS01800 b516b1f718608a12e2f93c30d72a7ae9 239 Gene3D G3DSA:3.30.70.20 150 203 5.8E-9 T 22-04-2016 SCD_RS01800 b516b1f718608a12e2f93c30d72a7ae9 239 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 14 223 1.3E-78 T 22-04-2016 IPR004494 MauM/NapG ferredoxin-type protein SCD_RS01800 b516b1f718608a12e2f93c30d72a7ae9 239 SUPERFAMILY SSF54862 66 209 5.44E-23 T 22-04-2016 SCD_RS01800 b516b1f718608a12e2f93c30d72a7ae9 239 PANTHER PTHR30176:SF3 11 239 1.2E-96 T 22-04-2016 SCD_RS01800 b516b1f718608a12e2f93c30d72a7ae9 239 PANTHER PTHR30176 11 239 1.2E-96 T 22-04-2016 SCD_RS01800 b516b1f718608a12e2f93c30d72a7ae9 239 Gene3D G3DSA:3.30.70.20 116 149 9.0E-8 T 22-04-2016 SCD_RS01800 b516b1f718608a12e2f93c30d72a7ae9 239 Pfam PF12800 4Fe-4S binding domain 190 202 0.36 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS01800 b516b1f718608a12e2f93c30d72a7ae9 239 Pfam PF12800 4Fe-4S binding domain 143 162 0.018 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS01800 b516b1f718608a12e2f93c30d72a7ae9 239 Gene3D G3DSA:3.30.70.20 66 115 1.2E-9 T 22-04-2016 SCD_RS01800 b516b1f718608a12e2f93c30d72a7ae9 239 Pfam PF12838 4Fe-4S dicluster domain 66 121 4.3E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS01800 b516b1f718608a12e2f93c30d72a7ae9 239 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 67 78 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS12105 4c5f3c165805dcb68b90a2d712d4bf64 148 Gene3D G3DSA:1.10.10.410 91 146 3.0E-21 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal SCD_RS12105 4c5f3c165805dcb68b90a2d712d4bf64 148 SUPERFAMILY SSF89095 1 146 3.3E-42 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 SCD_RS12105 4c5f3c165805dcb68b90a2d712d4bf64 148 Pfam PF09424 Yqey-like protein 6 146 1.9E-54 T 22-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial SCD_RS12105 4c5f3c165805dcb68b90a2d712d4bf64 148 PANTHER PTHR28055 1 148 5.5E-49 T 22-04-2016 SCD_RS12105 4c5f3c165805dcb68b90a2d712d4bf64 148 PANTHER PTHR28055:SF1 1 148 5.5E-49 T 22-04-2016 SCD_RS12105 4c5f3c165805dcb68b90a2d712d4bf64 148 Gene3D G3DSA:1.10.1510.10 1 90 4.4E-32 T 22-04-2016 SCD_RS06080 b5906371897ea19865e8edcda22956bb 538 Pfam PF01514 Secretory protein of YscJ/FliF family 31 220 6.5E-75 T 22-04-2016 IPR006182 Secretory protein YscJ/FliF SCD_RS06080 b5906371897ea19865e8edcda22956bb 538 PANTHER PTHR30046 1 538 1.1E-170 T 22-04-2016 SCD_RS06080 b5906371897ea19865e8edcda22956bb 538 PANTHER PTHR30046:SF0 1 538 1.1E-170 T 22-04-2016 SCD_RS06080 b5906371897ea19865e8edcda22956bb 538 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 16 481 1.0E-127 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SCD_RS06080 b5906371897ea19865e8edcda22956bb 538 PIRSF PIRSF004862 5 538 3.1E-148 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SCD_RS06080 b5906371897ea19865e8edcda22956bb 538 PRINTS PR01009 Flagellar M-ring protein signature 153 167 5.3E-41 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SCD_RS06080 b5906371897ea19865e8edcda22956bb 538 PRINTS PR01009 Flagellar M-ring protein signature 267 285 5.3E-41 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SCD_RS06080 b5906371897ea19865e8edcda22956bb 538 PRINTS PR01009 Flagellar M-ring protein signature 356 380 5.3E-41 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SCD_RS06080 b5906371897ea19865e8edcda22956bb 538 PRINTS PR01009 Flagellar M-ring protein signature 196 214 5.3E-41 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SCD_RS06080 b5906371897ea19865e8edcda22956bb 538 PRINTS PR01009 Flagellar M-ring protein signature 121 139 5.3E-41 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SCD_RS06080 b5906371897ea19865e8edcda22956bb 538 Pfam PF08345 Flagellar M-ring protein C-terminal 254 432 1.3E-50 T 22-04-2016 IPR013556 Flagellar M-ring C-terminal SCD_RS14335 9955213c1e2731b6ff1bdfafa8e93306 180 Gene3D G3DSA:3.40.630.30 11 176 1.0E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS14335 9955213c1e2731b6ff1bdfafa8e93306 180 PANTHER PTHR13256:SF39 12 176 5.0E-28 T 22-04-2016 SCD_RS14335 9955213c1e2731b6ff1bdfafa8e93306 180 Pfam PF13302 Acetyltransferase (GNAT) domain 11 143 1.6E-20 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SCD_RS14335 9955213c1e2731b6ff1bdfafa8e93306 180 SUPERFAMILY SSF55729 6 171 3.4E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS14335 9955213c1e2731b6ff1bdfafa8e93306 180 PANTHER PTHR13256 12 176 5.0E-28 T 22-04-2016 SCD_RS03870 a8bf553e53531d7913fc031e28ca9e91 128 SUPERFAMILY SSF52833 49 127 9.98E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS03870 a8bf553e53531d7913fc031e28ca9e91 128 Gene3D G3DSA:3.40.30.10 56 127 1.6E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS03870 a8bf553e53531d7913fc031e28ca9e91 128 ProSitePatterns PS00195 Glutaredoxin active site. 51 67 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 SCD_RS03870 a8bf553e53531d7913fc031e28ca9e91 128 Pfam PF13417 Glutathione S-transferase, N-terminal domain 51 127 4.8E-10 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SCD_RS06450 f99379000321444979cda5a2ddca4ff3 273 TIGRFAM TIGR03370 VPLPA-CTERM: VPLPA-CTERM protein sorting domain 247 271 1.1E-7 T 22-04-2016 IPR022472 VPLPA-CTERM protein sorting domain SCD_RS14080 4d8a599068b8ff2cc174d283c354c6bb 480 Gene3D G3DSA:3.40.1380.20 324 471 5.3E-40 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14080 4d8a599068b8ff2cc174d283c354c6bb 480 PANTHER PTHR11817:SF17 1 474 4.7E-251 T 22-04-2016 SCD_RS14080 4d8a599068b8ff2cc174d283c354c6bb 480 PRINTS PR01050 Pyruvate kinase family signature 292 310 1.9E-59 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14080 4d8a599068b8ff2cc174d283c354c6bb 480 PRINTS PR01050 Pyruvate kinase family signature 215 241 1.9E-59 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14080 4d8a599068b8ff2cc174d283c354c6bb 480 PRINTS PR01050 Pyruvate kinase family signature 311 327 1.9E-59 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14080 4d8a599068b8ff2cc174d283c354c6bb 480 PRINTS PR01050 Pyruvate kinase family signature 185 199 1.9E-59 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14080 4d8a599068b8ff2cc174d283c354c6bb 480 PRINTS PR01050 Pyruvate kinase family signature 60 76 1.9E-59 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14080 4d8a599068b8ff2cc174d283c354c6bb 480 PRINTS PR01050 Pyruvate kinase family signature 242 266 1.9E-59 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14080 4d8a599068b8ff2cc174d283c354c6bb 480 PRINTS PR01050 Pyruvate kinase family signature 267 291 1.9E-59 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14080 4d8a599068b8ff2cc174d283c354c6bb 480 PANTHER PTHR11817 1 474 4.7E-251 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14080 4d8a599068b8ff2cc174d283c354c6bb 480 SUPERFAMILY SSF51621 166 337 1.15E-95 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SCD_RS14080 4d8a599068b8ff2cc174d283c354c6bb 480 SUPERFAMILY SSF51621 2 76 1.15E-95 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SCD_RS14080 4d8a599068b8ff2cc174d283c354c6bb 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 471 1.9E-160 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14080 4d8a599068b8ff2cc174d283c354c6bb 480 Gene3D G3DSA:3.20.20.60 3 73 6.4E-96 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SCD_RS14080 4d8a599068b8ff2cc174d283c354c6bb 480 Gene3D G3DSA:3.20.20.60 167 323 6.4E-96 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SCD_RS14080 4d8a599068b8ff2cc174d283c354c6bb 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 469 3.8E-29 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14080 4d8a599068b8ff2cc174d283c354c6bb 480 Gene3D G3DSA:2.40.33.10 74 165 1.9E-29 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14080 4d8a599068b8ff2cc174d283c354c6bb 480 Pfam PF00224 Pyruvate kinase, barrel domain 3 338 2.1E-120 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14080 4d8a599068b8ff2cc174d283c354c6bb 480 SUPERFAMILY SSF50800 71 164 8.72E-27 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain SCD_RS14080 4d8a599068b8ff2cc174d283c354c6bb 480 SUPERFAMILY SSF52935 321 472 1.96E-37 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS06685 c296da62528e70de35f1e9561abd5428 527 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 27 280 5.4E-63 T 22-04-2016 IPR019127 Exosortase EpsH-related KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SCD_RS06685 c296da62528e70de35f1e9561abd5428 527 TIGRFAM TIGR02914 EpsI_fam: EpsI family protein 350 524 4.4E-44 T 22-04-2016 IPR014263 Methanolan biosynthesis EpsI SCD_RS06685 c296da62528e70de35f1e9561abd5428 527 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 187 282 5.7E-22 T 22-04-2016 IPR026392 Exosortase/Archaeosortase domain SCD_RS06685 c296da62528e70de35f1e9561abd5428 527 Pfam PF11984 Protein of unknown function (DUF3485) 321 523 3.4E-57 T 22-04-2016 IPR014263 Methanolan biosynthesis EpsI SCD_RS06685 c296da62528e70de35f1e9561abd5428 527 TIGRFAM TIGR04152 exosort_VPLPA: exosortase D, VPLPA-CTERM-specific 43 526 2.4E-179 T 22-04-2016 IPR026491 Exosortase D, VPLPA-CTERM-specific SCD_RS06685 c296da62528e70de35f1e9561abd5428 527 TIGRFAM TIGR02602 8TM_EpsH: exosortase 42 274 1.3E-51 T 22-04-2016 IPR013426 Exosortase, EpsH SCD_RS13630 edad0e5d08f4b92c917d42a720f9d579 440 PANTHER PTHR32468 20 414 5.5E-119 T 22-04-2016 SCD_RS13630 edad0e5d08f4b92c917d42a720f9d579 440 Pfam PF00999 Sodium/hydrogen exchanger family 25 413 2.9E-52 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SCD_RS13630 edad0e5d08f4b92c917d42a720f9d579 440 PANTHER PTHR32468:SF0 20 414 5.5E-119 T 22-04-2016 SCD_RS08085 a96631b8b4f1c05d6f7cdef9de9b9756 238 PANTHER PTHR21499 4 238 1.1E-113 T 22-04-2016 SCD_RS08085 a96631b8b4f1c05d6f7cdef9de9b9756 238 PANTHER PTHR21499:SF23 4 238 1.1E-113 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SCD_RS08085 a96631b8b4f1c05d6f7cdef9de9b9756 238 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 237 45.052 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SCD_RS08085 a96631b8b4f1c05d6f7cdef9de9b9756 238 PIRSF PIRSF005650 1 238 4.8E-93 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SCD_RS08085 a96631b8b4f1c05d6f7cdef9de9b9756 238 SUPERFAMILY SSF53633 4 236 1.57E-72 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SCD_RS08085 a96631b8b4f1c05d6f7cdef9de9b9756 238 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 7.0E-101 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SCD_RS08085 a96631b8b4f1c05d6f7cdef9de9b9756 238 Pfam PF00696 Amino acid kinase family 7 216 5.8E-31 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SCD_RS08085 a96631b8b4f1c05d6f7cdef9de9b9756 238 Gene3D G3DSA:3.40.1160.10 3 236 9.7E-88 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SCD_RS11820 2a42609f18d1b3b66ac7cf663173b271 361 SUPERFAMILY SSF53756 15 358 4.08E-33 T 22-04-2016 SCD_RS11820 2a42609f18d1b3b66ac7cf663173b271 361 Gene3D G3DSA:3.40.50.2000 246 319 5.6E-6 T 22-04-2016 SCD_RS11820 2a42609f18d1b3b66ac7cf663173b271 361 Pfam PF00534 Glycosyl transferases group 1 232 336 1.9E-12 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SCD_RS11820 2a42609f18d1b3b66ac7cf663173b271 361 PANTHER PTHR12526:SF374 84 361 2.5E-13 T 22-04-2016 SCD_RS11820 2a42609f18d1b3b66ac7cf663173b271 361 PANTHER PTHR12526 84 361 2.5E-13 T 22-04-2016 SCD_RS12990 e332ea2b358edeb20f5bc74d7271d50c 246 PANTHER PTHR24220:SF160 7 224 7.3E-86 T 22-04-2016 SCD_RS12990 e332ea2b358edeb20f5bc74d7271d50c 246 Gene3D G3DSA:3.40.50.300 2 226 1.4E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12990 e332ea2b358edeb20f5bc74d7271d50c 246 SMART SM00382 30 213 6.8E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS12990 e332ea2b358edeb20f5bc74d7271d50c 246 Pfam PF00005 ABC transporter 22 164 3.3E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS12990 e332ea2b358edeb20f5bc74d7271d50c 246 SUPERFAMILY SSF52540 5 225 1.43E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12990 e332ea2b358edeb20f5bc74d7271d50c 246 PANTHER PTHR24220 7 224 7.3E-86 T 22-04-2016 SCD_RS09935 4c57c9df0c57e106a431b2b1ed5be0fe 300 PANTHER PTHR37955 1 289 1.6E-53 T 22-04-2016 SCD_RS09935 4c57c9df0c57e106a431b2b1ed5be0fe 300 PANTHER PTHR37955:SF1 1 289 1.6E-53 T 22-04-2016 SCD_RS09935 4c57c9df0c57e106a431b2b1ed5be0fe 300 Pfam PF03595 Voltage-dependent anion channel 1 289 7.6E-33 T 22-04-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 SCD_RS07100 2134f34c744a9ecab7796da6caa8e9c0 459 SMART SM00388 253 311 9.7E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS07100 2134f34c744a9ecab7796da6caa8e9c0 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 9.5E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS07100 2134f34c744a9ecab7796da6caa8e9c0 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 9.5E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS07100 2134f34c744a9ecab7796da6caa8e9c0 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 9.5E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS07100 2134f34c744a9ecab7796da6caa8e9c0 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 9.5E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS07100 2134f34c744a9ecab7796da6caa8e9c0 459 Gene3D G3DSA:3.30.565.10 299 457 3.2E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS07100 2134f34c744a9ecab7796da6caa8e9c0 459 SUPERFAMILY SSF55874 314 457 1.83E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS07100 2134f34c744a9ecab7796da6caa8e9c0 459 SUPERFAMILY SSF47384 237 307 1.35E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS07100 2134f34c744a9ecab7796da6caa8e9c0 459 PANTHER PTHR24423 194 457 1.1E-52 T 22-04-2016 SCD_RS07100 2134f34c744a9ecab7796da6caa8e9c0 459 PANTHER PTHR24423 1 15 1.1E-52 T 22-04-2016 SCD_RS07100 2134f34c744a9ecab7796da6caa8e9c0 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 254 294 4.7E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS07100 2134f34c744a9ecab7796da6caa8e9c0 459 SMART SM00387 350 459 1.4E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS07100 2134f34c744a9ecab7796da6caa8e9c0 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 457 7.9E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS07100 2134f34c744a9ecab7796da6caa8e9c0 459 SMART SM00304 200 252 4.5E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS07100 2134f34c744a9ecab7796da6caa8e9c0 459 Pfam PF00672 HAMP domain 184 248 8.4E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS07100 2134f34c744a9ecab7796da6caa8e9c0 459 Gene3D G3DSA:1.10.287.130 243 298 1.9E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS08960 1649af597931480d018a44524a50d0fa 298 Gene3D G3DSA:1.10.260.40 21 92 1.2E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SCD_RS08960 1649af597931480d018a44524a50d0fa 298 PANTHER PTHR34475:SF1 7 297 1.1E-32 T 22-04-2016 SCD_RS08960 1649af597931480d018a44524a50d0fa 298 SUPERFAMILY SSF47413 20 87 8.76E-5 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SCD_RS08960 1649af597931480d018a44524a50d0fa 298 SMART SM00530 23 84 0.0022 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SCD_RS08960 1649af597931480d018a44524a50d0fa 298 PANTHER PTHR34475 7 297 1.1E-32 T 22-04-2016 SCD_RS08960 1649af597931480d018a44524a50d0fa 298 Pfam PF13413 Helix-turn-helix domain 23 83 2.4E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SCD_RS08960 1649af597931480d018a44524a50d0fa 298 Pfam PF13464 Domain of unknown function (DUF4115) 224 296 2.7E-22 T 22-04-2016 IPR025194 Domain of unknown function DUF4115 SCD_RS01170 ab7d149eda3446c6309990d44c0879b1 616 Gene3D G3DSA:3.40.50.150 76 306 8.9E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS01170 ab7d149eda3446c6309990d44c0879b1 616 SUPERFAMILY SSF53335 65 316 1.91E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS01170 ab7d149eda3446c6309990d44c0879b1 616 Pfam PF02384 N-6 DNA Methylase 67 326 3.9E-15 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 SCD_RS01170 ab7d149eda3446c6309990d44c0879b1 616 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 216 240 8.0E-15 T 22-04-2016 SCD_RS01170 ab7d149eda3446c6309990d44c0879b1 616 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 74 90 8.0E-15 T 22-04-2016 SCD_RS01170 ab7d149eda3446c6309990d44c0879b1 616 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 104 118 8.0E-15 T 22-04-2016 SCD_RS01170 ab7d149eda3446c6309990d44c0879b1 616 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 183 195 8.0E-15 T 22-04-2016 SCD_RS01170 ab7d149eda3446c6309990d44c0879b1 616 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 186 192 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SCD_RS10245 bb989bf20658f7be35cfb0c6229de502 212 Gene3D G3DSA:3.60.15.10 2 208 6.2E-60 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS10245 bb989bf20658f7be35cfb0c6229de502 212 SUPERFAMILY SSF56281 5 207 3.22E-57 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS10245 bb989bf20658f7be35cfb0c6229de502 212 Pfam PF00753 Metallo-beta-lactamase superfamily 9 192 7.0E-29 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS10245 bb989bf20658f7be35cfb0c6229de502 212 PANTHER PTHR11935:SF115 1 207 1.1E-117 T 22-04-2016 SCD_RS10245 bb989bf20658f7be35cfb0c6229de502 212 SMART SM00849 12 192 8.7E-37 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS10245 bb989bf20658f7be35cfb0c6229de502 212 PANTHER PTHR11935 1 207 1.1E-117 T 22-04-2016 SCD_RS01305 4056d48afcdd6629926efe6292eae2fd 164 SUPERFAMILY SSF47413 49 114 1.29E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SCD_RS01305 4056d48afcdd6629926efe6292eae2fd 164 SMART SM00530 56 112 3.4E-4 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SCD_RS01305 4056d48afcdd6629926efe6292eae2fd 164 Gene3D G3DSA:1.10.260.40 53 158 1.5E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SCD_RS01305 4056d48afcdd6629926efe6292eae2fd 164 Pfam PF13560 Helix-turn-helix domain 52 114 4.3E-9 T 22-04-2016 SCD_RS00005 a8346e7b4cf0cb83313b177b99ed3287 442 ProSitePatterns PS01008 DnaA protein signature. 400 419 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SCD_RS00005 a8346e7b4cf0cb83313b177b99ed3287 442 PANTHER PTHR30050:SF2 1 442 9.7E-201 T 22-04-2016 SCD_RS00005 a8346e7b4cf0cb83313b177b99ed3287 442 Pfam PF11638 DnaA N-terminal domain 3 63 2.8E-16 T 22-04-2016 IPR024633 DnaA N-terminal domain SCD_RS00005 a8346e7b4cf0cb83313b177b99ed3287 442 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 352 419 1.0E-31 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SCD_RS00005 a8346e7b4cf0cb83313b177b99ed3287 442 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 2 441 32.027 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SCD_RS00005 a8346e7b4cf0cb83313b177b99ed3287 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 238 265 4.8E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SCD_RS00005 a8346e7b4cf0cb83313b177b99ed3287 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 400 419 4.8E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SCD_RS00005 a8346e7b4cf0cb83313b177b99ed3287 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 204 218 4.8E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SCD_RS00005 a8346e7b4cf0cb83313b177b99ed3287 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 172 186 4.8E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SCD_RS00005 a8346e7b4cf0cb83313b177b99ed3287 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 140 160 4.8E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SCD_RS00005 a8346e7b4cf0cb83313b177b99ed3287 442 Pfam PF00308 Bacterial dnaA protein 107 324 6.4E-90 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA SCD_RS00005 a8346e7b4cf0cb83313b177b99ed3287 442 Gene3D G3DSA:1.10.8.60 273 340 1.3E-29 T 22-04-2016 SCD_RS00005 a8346e7b4cf0cb83313b177b99ed3287 442 Gene3D G3DSA:1.10.1750.10 341 441 5.7E-39 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SCD_RS00005 a8346e7b4cf0cb83313b177b99ed3287 442 SMART SM00382 139 270 4.2E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS00005 a8346e7b4cf0cb83313b177b99ed3287 442 Gene3D G3DSA:3.40.50.300 98 271 4.4E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00005 a8346e7b4cf0cb83313b177b99ed3287 442 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 5 438 1.9E-175 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SCD_RS00005 a8346e7b4cf0cb83313b177b99ed3287 442 SMART SM00760 350 419 2.5E-41 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SCD_RS00005 a8346e7b4cf0cb83313b177b99ed3287 442 SUPERFAMILY SSF52540 107 318 5.3E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00005 a8346e7b4cf0cb83313b177b99ed3287 442 PANTHER PTHR30050 1 442 9.7E-201 T 22-04-2016 SCD_RS00005 a8346e7b4cf0cb83313b177b99ed3287 442 SUPERFAMILY SSF48295 338 441 2.59E-36 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 SCD_RS12880 bf496553dffe4bc4902381f713a68da6 70 PANTHER PTHR40613:SF1 1 69 1.5E-19 T 22-04-2016 SCD_RS12880 bf496553dffe4bc4902381f713a68da6 70 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 2 67 1.6E-29 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor SCD_RS12880 bf496553dffe4bc4902381f713a68da6 70 PANTHER PTHR40613 1 69 1.5E-19 T 22-04-2016 SCD_RS12880 bf496553dffe4bc4902381f713a68da6 70 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 70 5.0E-24 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor SCD_RS13765 a860f95e8378ff51f2fe13770854cbcc 361 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 354 3.6E-119 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SCD_RS13765 a860f95e8378ff51f2fe13770854cbcc 361 SUPERFAMILY SSF101790 270 356 1.28E-21 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain SCD_RS13765 a860f95e8378ff51f2fe13770854cbcc 361 Gene3D G3DSA:3.30.1360.120 2 53 3.1E-49 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SCD_RS13765 a860f95e8378ff51f2fe13770854cbcc 361 Gene3D G3DSA:3.30.1360.120 146 232 3.1E-49 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SCD_RS13765 a860f95e8378ff51f2fe13770854cbcc 361 Gene3D G3DSA:3.30.70.1400 54 130 4.5E-29 T 22-04-2016 SCD_RS13765 a860f95e8378ff51f2fe13770854cbcc 361 PANTHER PTHR13847 5 352 1.0E-52 T 22-04-2016 SCD_RS13765 a860f95e8378ff51f2fe13770854cbcc 361 Gene3D G3DSA:2.40.30.110 276 357 8.4E-23 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SCD_RS13765 a860f95e8378ff51f2fe13770854cbcc 361 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 255 1.3E-82 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal SCD_RS13765 a860f95e8378ff51f2fe13770854cbcc 361 PANTHER PTHR13847:SF5 5 352 1.0E-52 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SCD_RS13765 a860f95e8378ff51f2fe13770854cbcc 361 SUPERFAMILY SSF103025 2 272 5.49E-87 T 22-04-2016 SCD_RS13765 a860f95e8378ff51f2fe13770854cbcc 361 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 354 42.266 T 22-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SCD_RS13765 a860f95e8378ff51f2fe13770854cbcc 361 PIRSF PIRSF006487 1 359 4.2E-78 T 22-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SCD_RS13765 a860f95e8378ff51f2fe13770854cbcc 361 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 262 349 1.2E-13 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SCD_RS10125 fca969943ccead0b651986baf467ec76 307 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 307 66.163 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 SCD_RS10125 fca969943ccead0b651986baf467ec76 307 PANTHER PTHR34308 23 304 6.3E-41 T 22-04-2016 SCD_RS10125 fca969943ccead0b651986baf467ec76 307 Pfam PF03186 CobD/Cbib protein 22 284 6.2E-36 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 SCD_RS10125 fca969943ccead0b651986baf467ec76 307 PANTHER PTHR34308:SF1 23 304 6.3E-41 T 22-04-2016 SCD_RS07995 06a22f0e22ccbeb657ca8748310f1ef2 311 Gene3D G3DSA:3.40.50.2000 145 249 2.2E-7 T 22-04-2016 SCD_RS07995 06a22f0e22ccbeb657ca8748310f1ef2 311 PANTHER PTHR12526 1 285 6.0E-14 T 22-04-2016 SCD_RS07995 06a22f0e22ccbeb657ca8748310f1ef2 311 SUPERFAMILY SSF53756 2 293 2.83E-25 T 22-04-2016 SCD_RS07995 06a22f0e22ccbeb657ca8748310f1ef2 311 Pfam PF00534 Glycosyl transferases group 1 143 281 4.6E-15 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SCD_RS07995 06a22f0e22ccbeb657ca8748310f1ef2 311 TIGRFAM TIGR04348 TIGR04348: putative glycosyltransferase, TIGR04348 family 3 311 1.9E-130 T 22-04-2016 IPR027627 Putative glycosyltransferase SCD_RS12590 70f2b8f9b95990aaf7f029212e9a4c77 744 Pfam PF00593 TonB dependent receptor 448 742 4.2E-32 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SCD_RS12590 70f2b8f9b95990aaf7f029212e9a4c77 744 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 727 744 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site SCD_RS12590 70f2b8f9b95990aaf7f029212e9a4c77 744 Gene3D G3DSA:2.40.170.20 144 744 7.3E-78 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SCD_RS12590 70f2b8f9b95990aaf7f029212e9a4c77 744 SUPERFAMILY SSF56935 13 744 2.12E-102 T 22-04-2016 SCD_RS12590 70f2b8f9b95990aaf7f029212e9a4c77 744 Pfam PF07715 TonB-dependent Receptor Plug Domain 35 142 1.7E-18 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SCD_RS12590 70f2b8f9b95990aaf7f029212e9a4c77 744 PANTHER PTHR32552 20 596 1.4E-46 T 22-04-2016 SCD_RS12590 70f2b8f9b95990aaf7f029212e9a4c77 744 PANTHER PTHR32552 614 744 1.4E-46 T 22-04-2016 SCD_RS12590 70f2b8f9b95990aaf7f029212e9a4c77 744 Gene3D G3DSA:2.170.130.10 12 143 2.7E-27 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SCD_RS02855 a3d3923c208de788860f3ea77f756abc 271 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS02855 a3d3923c208de788860f3ea77f756abc 271 PRINTS PR00364 Disease resistance protein signature 171 185 8.9E-5 T 22-04-2016 SCD_RS02855 a3d3923c208de788860f3ea77f756abc 271 PRINTS PR00364 Disease resistance protein signature 34 49 8.9E-5 T 22-04-2016 SCD_RS02855 a3d3923c208de788860f3ea77f756abc 271 SMART SM00382 31 204 1.8E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS02855 a3d3923c208de788860f3ea77f756abc 271 Gene3D G3DSA:3.40.50.300 3 238 1.3E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02855 a3d3923c208de788860f3ea77f756abc 271 Pfam PF00005 ABC transporter 22 171 7.5E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS02855 a3d3923c208de788860f3ea77f756abc 271 SUPERFAMILY SSF52540 6 236 6.39E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02855 a3d3923c208de788860f3ea77f756abc 271 PANTHER PTHR24220:SF368 8 267 1.7E-130 T 22-04-2016 SCD_RS02855 a3d3923c208de788860f3ea77f756abc 271 PANTHER PTHR24220 8 267 1.7E-130 T 22-04-2016 SCD_RS07290 253fc6e7e62bf3d29dc12efba8434641 87 PANTHER PTHR12735 5 87 1.3E-26 T 22-04-2016 SCD_RS07290 253fc6e7e62bf3d29dc12efba8434641 87 Pfam PF01722 BolA-like protein 13 86 2.4E-29 T 22-04-2016 IPR002634 BolA protein SCD_RS07290 253fc6e7e62bf3d29dc12efba8434641 87 SUPERFAMILY SSF82657 1 86 1.44E-25 T 22-04-2016 IPR002634 BolA protein SCD_RS07290 253fc6e7e62bf3d29dc12efba8434641 87 Gene3D G3DSA:3.30.70.1500 1 83 6.4E-28 T 22-04-2016 SCD_RS07290 253fc6e7e62bf3d29dc12efba8434641 87 PIRSF PIRSF003113 1 87 7.3E-27 T 22-04-2016 IPR002634 BolA protein SCD_RS07290 253fc6e7e62bf3d29dc12efba8434641 87 PANTHER PTHR12735:SF24 5 87 1.3E-26 T 22-04-2016 SCD_RS08030 c79b83e0eee3248a57eeb5230fc661e5 378 PANTHER PTHR30372:SF0 1 377 1.0E-113 T 22-04-2016 SCD_RS08030 c79b83e0eee3248a57eeb5230fc661e5 378 PANTHER PTHR30372 1 377 1.0E-113 T 22-04-2016 SCD_RS08030 c79b83e0eee3248a57eeb5230fc661e5 378 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 5 375 2.9E-118 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 SCD_RS08030 c79b83e0eee3248a57eeb5230fc661e5 378 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 1 377 38.219 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 SCD_RS08030 c79b83e0eee3248a57eeb5230fc661e5 378 Gene3D G3DSA:3.40.50.2000 156 352 8.2E-5 T 22-04-2016 SCD_RS08030 c79b83e0eee3248a57eeb5230fc661e5 378 Pfam PF02684 Lipid-A-disaccharide synthetase 5 367 1.0E-111 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 SCD_RS08030 c79b83e0eee3248a57eeb5230fc661e5 378 SUPERFAMILY SSF53756 2 375 1.41E-36 T 22-04-2016 SCD_RS13000 bbfc9991a5e81382389163fd9f21305e 450 SUPERFAMILY SSF52317 353 398 2.65E-16 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SCD_RS13000 bbfc9991a5e81382389163fd9f21305e 450 SUPERFAMILY SSF52317 158 311 2.65E-16 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SCD_RS13000 bbfc9991a5e81382389163fd9f21305e 450 Pfam PF09822 ABC-type uncharacterized transport system 41 243 1.1E-29 T 22-04-2016 IPR019196 ABC-type uncharacterised transport system SCD_RS11435 e0bf560c8ce226cda04ecfc3b371cf0b 523 Pfam PF16658 Class II release factor RF3, C-terminal domain 381 507 1.9E-44 T 22-04-2016 IPR032090 Peptide chain release factor 3, C-terminal SCD_RS11435 e0bf560c8ce226cda04ecfc3b371cf0b 523 Gene3D G3DSA:3.30.70.870 389 458 2.6E-13 T 22-04-2016 SCD_RS11435 e0bf560c8ce226cda04ecfc3b371cf0b 523 SUPERFAMILY SSF54980 387 462 8.99E-17 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SCD_RS11435 e0bf560c8ce226cda04ecfc3b371cf0b 523 PANTHER PTHR23115 1 181 2.7E-236 T 22-04-2016 SCD_RS11435 e0bf560c8ce226cda04ecfc3b371cf0b 523 PANTHER PTHR23115 245 466 2.7E-236 T 22-04-2016 SCD_RS11435 e0bf560c8ce226cda04ecfc3b371cf0b 523 PANTHER PTHR23115:SF69 1 181 2.7E-236 T 22-04-2016 SCD_RS11435 e0bf560c8ce226cda04ecfc3b371cf0b 523 PANTHER PTHR23115:SF69 245 466 2.7E-236 T 22-04-2016 SCD_RS11435 e0bf560c8ce226cda04ecfc3b371cf0b 523 Pfam PF03144 Elongation factor Tu domain 2 308 373 4.8E-8 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SCD_RS11435 e0bf560c8ce226cda04ecfc3b371cf0b 523 Gene3D G3DSA:2.40.30.10 286 388 3.4E-23 T 22-04-2016 SCD_RS11435 e0bf560c8ce226cda04ecfc3b371cf0b 523 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 55 70 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SCD_RS11435 e0bf560c8ce226cda04ecfc3b371cf0b 523 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 1 520 52.534 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 SCD_RS11435 e0bf560c8ce226cda04ecfc3b371cf0b 523 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 4 521 3.4E-241 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 SCD_RS11435 e0bf560c8ce226cda04ecfc3b371cf0b 523 SUPERFAMILY SSF50447 255 387 3.98E-29 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SCD_RS11435 e0bf560c8ce226cda04ecfc3b371cf0b 523 Pfam PF00009 Elongation factor Tu GTP binding domain 10 271 4.6E-51 T 22-04-2016 SCD_RS11435 e0bf560c8ce226cda04ecfc3b371cf0b 523 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 151 5.4E-19 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SCD_RS11435 e0bf560c8ce226cda04ecfc3b371cf0b 523 SUPERFAMILY SSF52540 7 271 3.38E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11435 e0bf560c8ce226cda04ecfc3b371cf0b 523 PRINTS PR00315 GTP-binding elongation factor signature 134 143 1.0E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS11435 e0bf560c8ce226cda04ecfc3b371cf0b 523 PRINTS PR00315 GTP-binding elongation factor signature 98 109 1.0E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS11435 e0bf560c8ce226cda04ecfc3b371cf0b 523 PRINTS PR00315 GTP-binding elongation factor signature 82 92 1.0E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS11435 e0bf560c8ce226cda04ecfc3b371cf0b 523 PRINTS PR00315 GTP-binding elongation factor signature 62 70 1.0E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS11435 e0bf560c8ce226cda04ecfc3b371cf0b 523 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.0E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SCD_RS11435 e0bf560c8ce226cda04ecfc3b371cf0b 523 Gene3D G3DSA:3.40.50.300 4 277 4.9E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS15610 2726604879cce160b573b5f5d541cdb0 304 SMART SM00267 127 300 1.6E-46 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15610 2726604879cce160b573b5f5d541cdb0 304 SUPERFAMILY SSF55073 143 300 2.51E-45 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS15610 2726604879cce160b573b5f5d541cdb0 304 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 137 299 2.1E-44 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15610 2726604879cce160b573b5f5d541cdb0 304 PANTHER PTHR10799 106 296 5.2E-23 T 22-04-2016 SCD_RS15610 2726604879cce160b573b5f5d541cdb0 304 PANTHER PTHR10799:SF710 106 296 5.2E-23 T 22-04-2016 SCD_RS15610 2726604879cce160b573b5f5d541cdb0 304 Pfam PF13682 Chemoreceptor zinc-binding domain 29 97 1.0E-8 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SCD_RS15610 2726604879cce160b573b5f5d541cdb0 304 Pfam PF00990 Diguanylate cyclase, GGDEF domain 140 296 1.9E-41 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15610 2726604879cce160b573b5f5d541cdb0 304 Gene3D G3DSA:3.30.70.270 140 300 3.0E-50 T 22-04-2016 SCD_RS01895 23492d7077ab36751c626f815a7bca17 425 SUPERFAMILY SSF51905 158 285 2.36E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS01895 23492d7077ab36751c626f815a7bca17 425 Pfam PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding 361 423 4.1E-18 T 22-04-2016 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 SCD_RS01895 23492d7077ab36751c626f815a7bca17 425 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 40 152 3.3E-10 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS01895 23492d7077ab36751c626f815a7bca17 425 PANTHER PTHR10632 13 423 1.6E-112 T 22-04-2016 SCD_RS01895 23492d7077ab36751c626f815a7bca17 425 SUPERFAMILY SSF51905 38 159 3.89E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS01895 23492d7077ab36751c626f815a7bca17 425 PANTHER PTHR10632:SF10 13 423 1.6E-112 T 22-04-2016 SCD_RS01895 23492d7077ab36751c626f815a7bca17 425 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 26 6.2E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SCD_RS01895 23492d7077ab36751c626f815a7bca17 425 Gene3D G3DSA:3.50.50.60 159 285 1.3E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS01895 23492d7077ab36751c626f815a7bca17 425 Gene3D G3DSA:3.90.760.10 361 423 1.5E-18 T 22-04-2016 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 SCD_RS01895 23492d7077ab36751c626f815a7bca17 425 Gene3D G3DSA:3.50.50.60 286 357 1.8E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS01895 23492d7077ab36751c626f815a7bca17 425 Gene3D G3DSA:3.50.50.60 39 152 1.8E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS01895 23492d7077ab36751c626f815a7bca17 425 SUPERFAMILY SSF55424 361 423 2.75E-13 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SCD_RS05965 2962d0690ac458768491f53e4b6114d5 159 Gene3D G3DSA:1.10.10.10 5 139 8.0E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS05965 2962d0690ac458768491f53e4b6114d5 159 Pfam PF01047 MarR family 33 90 6.7E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SCD_RS05965 2962d0690ac458768491f53e4b6114d5 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 1.1E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SCD_RS05965 2962d0690ac458768491f53e4b6114d5 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 1.1E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SCD_RS05965 2962d0690ac458768491f53e4b6114d5 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 1.1E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SCD_RS05965 2962d0690ac458768491f53e4b6114d5 159 SMART SM00347 25 125 2.6E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SCD_RS05965 2962d0690ac458768491f53e4b6114d5 159 SUPERFAMILY SSF46785 8 140 2.59E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS05965 2962d0690ac458768491f53e4b6114d5 159 PANTHER PTHR18964:SF135 12 139 9.8E-20 T 22-04-2016 SCD_RS05965 2962d0690ac458768491f53e4b6114d5 159 PANTHER PTHR18964 12 139 9.8E-20 T 22-04-2016 SCD_RS14340 0f5fe000406c15a28600a16a6bdfc216 430 PANTHER PTHR30244:SF16 18 380 8.8E-87 T 22-04-2016 SCD_RS14340 0f5fe000406c15a28600a16a6bdfc216 430 PANTHER PTHR30244:SF16 403 426 8.8E-87 T 22-04-2016 SCD_RS14340 0f5fe000406c15a28600a16a6bdfc216 430 SUPERFAMILY SSF53383 26 393 5.78E-92 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS14340 0f5fe000406c15a28600a16a6bdfc216 430 Gene3D G3DSA:3.90.1150.10 277 424 2.2E-18 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS14340 0f5fe000406c15a28600a16a6bdfc216 430 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 30 380 1.3E-100 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SCD_RS14340 0f5fe000406c15a28600a16a6bdfc216 430 Gene3D G3DSA:3.40.640.10 28 274 1.9E-71 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS14340 0f5fe000406c15a28600a16a6bdfc216 430 PANTHER PTHR30244 18 380 8.8E-87 T 22-04-2016 SCD_RS14340 0f5fe000406c15a28600a16a6bdfc216 430 PANTHER PTHR30244 403 426 8.8E-87 T 22-04-2016 SCD_RS11950 7c2df10b517ddfd4b3a57035ee3a105b 197 Pfam PF04519 Polymer-forming cytoskeletal 52 147 1.9E-17 T 22-04-2016 IPR007607 Protein of unknown function DUF583 SCD_RS11950 7c2df10b517ddfd4b3a57035ee3a105b 197 PANTHER PTHR35024 10 181 8.8E-13 T 22-04-2016 SCD_RS11950 7c2df10b517ddfd4b3a57035ee3a105b 197 PANTHER PTHR35024:SF2 10 181 8.8E-13 T 22-04-2016 SCD_RS09020 62d009da71804f6ff056a0983f5949db 566 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 558 2.0E-152 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 SCD_RS09020 62d009da71804f6ff056a0983f5949db 566 Pfam PF02272 DHHA1 domain 376 445 8.5E-15 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SCD_RS09020 62d009da71804f6ff056a0983f5949db 566 Pfam PF01368 DHH family 75 221 1.5E-10 T 22-04-2016 IPR001667 DDH domain SCD_RS09020 62d009da71804f6ff056a0983f5949db 566 PANTHER PTHR30255 1 563 9.7E-196 T 22-04-2016 SCD_RS09020 62d009da71804f6ff056a0983f5949db 566 PANTHER PTHR30255:SF2 1 563 9.7E-196 T 22-04-2016 SCD_RS09020 62d009da71804f6ff056a0983f5949db 566 SUPERFAMILY SSF64182 48 459 5.49E-119 T 22-04-2016 SCD_RS10980 3dfc991a454cea8be5dd27ee9d4088fc 165 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 93 104 - T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SCD_RS10980 3dfc991a454cea8be5dd27ee9d4088fc 165 PANTHER PTHR20941 8 164 5.4E-66 T 22-04-2016 SCD_RS10980 3dfc991a454cea8be5dd27ee9d4088fc 165 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 10 138 2.2E-38 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SCD_RS10980 3dfc991a454cea8be5dd27ee9d4088fc 165 Gene3D G3DSA:3.30.70.560 8 158 7.0E-56 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SCD_RS10980 3dfc991a454cea8be5dd27ee9d4088fc 165 SUPERFAMILY SSF55083 7 146 1.09E-52 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SCD_RS10980 3dfc991a454cea8be5dd27ee9d4088fc 165 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 9 138 3.4E-44 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SCD_RS14125 5a01140dada29725a90749fcb92a9b3f 151 SUPERFAMILY SSF88697 1 150 1.24E-56 T 22-04-2016 IPR015947 PUA-like domain SCD_RS14125 5a01140dada29725a90749fcb92a9b3f 151 PANTHER PTHR14087 1 150 1.2E-73 T 22-04-2016 SCD_RS14125 5a01140dada29725a90749fcb92a9b3f 151 Pfam PF01878 EVE domain 2 148 4.6E-53 T 22-04-2016 IPR002740 EVE domain SCD_RS14125 5a01140dada29725a90749fcb92a9b3f 151 Gene3D G3DSA:3.10.590.10 1 150 8.5E-32 T 22-04-2016 IPR002740 EVE domain SCD_RS10590 3c3d12dbc052d1ac9636c4231f46835a 293 PANTHER PTHR10120 1 292 1.8E-94 T 22-04-2016 SCD_RS10590 3c3d12dbc052d1ac9636c4231f46835a 293 Gene3D G3DSA:3.30.2010.10 77 162 1.3E-29 T 22-04-2016 SCD_RS10590 3c3d12dbc052d1ac9636c4231f46835a 293 PANTHER PTHR10120:SF19 1 292 1.8E-94 T 22-04-2016 SCD_RS10590 3c3d12dbc052d1ac9636c4231f46835a 293 Pfam PF01435 Peptidase family M48 83 291 9.0E-38 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SCD_RS10590 3c3d12dbc052d1ac9636c4231f46835a 293 Hamap MF_00188 Protease HtpX [htpX]. 1 291 25.174 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 SCD_RS09595 31c5f101adf95f1402ee64c884b85018 95 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 1 93 22.306 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 SCD_RS09595 31c5f101adf95f1402ee64c884b85018 95 PANTHER PTHR12599 1 93 2.0E-29 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 SCD_RS09595 31c5f101adf95f1402ee64c884b85018 95 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 3 91 4.4E-31 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 SCD_RS09595 31c5f101adf95f1402ee64c884b85018 95 Gene3D G3DSA:3.30.1360.20 18 93 1.3E-28 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 SCD_RS09595 31c5f101adf95f1402ee64c884b85018 95 SUPERFAMILY SSF55248 3 93 1.83E-30 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 SCD_RS09110 970ba23ca55b2d087bf575f1c0328587 438 SMART SM00729 136 361 4.5E-51 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SCD_RS09110 970ba23ca55b2d087bf575f1c0328587 438 PANTHER PTHR11918:SF57 1 438 3.1E-227 T 22-04-2016 SCD_RS09110 970ba23ca55b2d087bf575f1c0328587 438 SUPERFAMILY SSF102114 113 366 2.49E-51 T 22-04-2016 SCD_RS09110 970ba23ca55b2d087bf575f1c0328587 438 Gene3D G3DSA:3.80.30.20 134 370 4.4E-71 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SCD_RS09110 970ba23ca55b2d087bf575f1c0328587 438 PANTHER PTHR11918 1 438 3.1E-227 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein SCD_RS09110 970ba23ca55b2d087bf575f1c0328587 438 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 5 436 61.006 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 SCD_RS09110 970ba23ca55b2d087bf575f1c0328587 438 Pfam PF04055 Radical SAM superfamily 142 319 4.4E-28 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SCD_RS09110 970ba23ca55b2d087bf575f1c0328587 438 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 140 160 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 SCD_RS09110 970ba23ca55b2d087bf575f1c0328587 438 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 6 434 1.8E-102 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 SCD_RS09110 970ba23ca55b2d087bf575f1c0328587 438 Gene3D G3DSA:2.40.50.140 376 437 1.1E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS09110 970ba23ca55b2d087bf575f1c0328587 438 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 6 434 1.5E-174 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 SCD_RS09110 970ba23ca55b2d087bf575f1c0328587 438 Pfam PF00919 Uncharacterized protein family UPF0004 6 97 2.9E-19 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 SCD_RS04185 5f0e541edfb45fd04dc55b6b819833d3 155 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 18 152 1.9E-48 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SCD_RS04185 5f0e541edfb45fd04dc55b6b819833d3 155 SUPERFAMILY SSF52121 11 155 1.57E-51 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SCD_RS04185 5f0e541edfb45fd04dc55b6b819833d3 155 Gene3D G3DSA:3.40.50.960 9 154 1.2E-54 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SCD_RS04185 5f0e541edfb45fd04dc55b6b819833d3 155 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 20 151 3.9E-40 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SCD_RS04185 5f0e541edfb45fd04dc55b6b819833d3 155 PANTHER PTHR21058 10 155 6.4E-56 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SCD_RS04185 5f0e541edfb45fd04dc55b6b819833d3 155 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 14 155 28.11 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SCD_RS03055 322a164399452f94cb66043fcf8058d4 231 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 4.1E-52 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein SCD_RS03055 322a164399452f94cb66043fcf8058d4 231 SUPERFAMILY SSF56808 6 226 1.02E-81 T 22-04-2016 IPR023674 Ribosomal protein L1-like SCD_RS03055 322a164399452f94cb66043fcf8058d4 231 Gene3D G3DSA:3.30.190.20 161 226 3.5E-45 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 SCD_RS03055 322a164399452f94cb66043fcf8058d4 231 Gene3D G3DSA:3.30.190.20 18 68 3.5E-45 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 SCD_RS03055 322a164399452f94cb66043fcf8058d4 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site SCD_RS03055 322a164399452f94cb66043fcf8058d4 231 PANTHER PTHR23105 17 229 3.1E-76 T 22-04-2016 SCD_RS03055 322a164399452f94cb66043fcf8058d4 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 4 228 1.6E-103 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SCD_RS03055 322a164399452f94cb66043fcf8058d4 231 PIRSF PIRSF002155 1 227 9.0E-79 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 SCD_RS03055 322a164399452f94cb66043fcf8058d4 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.823 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SCD_RS03055 322a164399452f94cb66043fcf8058d4 231 Gene3D G3DSA:3.40.50.790 69 159 2.6E-41 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich SCD_RS03055 322a164399452f94cb66043fcf8058d4 231 PANTHER PTHR23105:SF5 17 229 3.1E-76 T 22-04-2016 SCD_RS09405 1a91add3363fec255593e0a97ac9cb8e 262 Gene3D G3DSA:3.60.21.10 5 127 6.8E-31 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SCD_RS09405 1a91add3363fec255593e0a97ac9cb8e 262 Gene3D G3DSA:3.60.21.10 190 243 6.8E-31 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SCD_RS09405 1a91add3363fec255593e0a97ac9cb8e 262 PANTHER PTHR34990:SF2 3 244 4.9E-106 T 22-04-2016 SCD_RS09405 1a91add3363fec255593e0a97ac9cb8e 262 Pfam PF00149 Calcineurin-like phosphoesterase 7 207 8.2E-12 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SCD_RS09405 1a91add3363fec255593e0a97ac9cb8e 262 PANTHER PTHR34990 3 244 4.9E-106 T 22-04-2016 SCD_RS09405 1a91add3363fec255593e0a97ac9cb8e 262 SUPERFAMILY SSF56300 180 245 3.19E-32 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SCD_RS09405 1a91add3363fec255593e0a97ac9cb8e 262 SUPERFAMILY SSF56300 2 123 3.19E-32 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SCD_RS02645 ca329a44ef9758ab7a9fcc418fe4bdc2 244 Gene3D G3DSA:2.30.110.10 13 118 3.0E-15 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SCD_RS02645 ca329a44ef9758ab7a9fcc418fe4bdc2 244 Pfam PF07317 Flagellar regulator YcgR 13 115 6.9E-21 T 22-04-2016 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal SCD_RS02645 ca329a44ef9758ab7a9fcc418fe4bdc2 244 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 8 241 27.306 T 22-04-2016 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 SCD_RS02645 ca329a44ef9758ab7a9fcc418fe4bdc2 244 Pfam PF07238 PilZ domain 119 231 2.5E-10 T 22-04-2016 IPR009875 PilZ domain GO:0035438 SCD_RS02645 ca329a44ef9758ab7a9fcc418fe4bdc2 244 Gene3D G3DSA:2.40.10.220 120 239 8.5E-17 T 22-04-2016 SCD_RS15290 1dd7dd71e5e59659b38b414c4b0a3077 283 SUPERFAMILY SSF51395 1 279 1.25E-79 T 22-04-2016 SCD_RS15290 1dd7dd71e5e59659b38b414c4b0a3077 283 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 1 279 3.9E-116 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 SCD_RS15290 1dd7dd71e5e59659b38b414c4b0a3077 283 PIRSF PIRSF006621 1 283 4.2E-97 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SCD_RS15290 1dd7dd71e5e59659b38b414c4b0a3077 283 Pfam PF01207 Dihydrouridine synthase (Dus) 1 279 8.2E-102 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SCD_RS15290 1dd7dd71e5e59659b38b414c4b0a3077 283 Gene3D G3DSA:3.20.20.70 1 220 5.7E-77 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS15290 1dd7dd71e5e59659b38b414c4b0a3077 283 Gene3D G3DSA:1.10.1200.80 229 281 3.2E-19 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 SCD_RS15290 1dd7dd71e5e59659b38b414c4b0a3077 283 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 70 88 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 SCD_RS15290 1dd7dd71e5e59659b38b414c4b0a3077 283 PANTHER PTHR11082 1 279 3.2E-122 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SCD_RS15290 1dd7dd71e5e59659b38b414c4b0a3077 283 PANTHER PTHR11082:SF25 1 279 3.2E-122 T 22-04-2016 SCD_RS00445 e274c95a215f4f45683f2564856b1129 287 Pfam PF08867 FRG domain 46 167 6.8E-9 T 22-04-2016 IPR014966 FRG domain SCD_RS00445 e274c95a215f4f45683f2564856b1129 287 SMART SM00901 41 172 4.2E-5 T 22-04-2016 IPR014966 FRG domain SCD_RS09320 04bd77085f106068cb99e6de7e9f3273 428 Pfam PF12831 FAD dependent oxidoreductase 11 49 2.6E-10 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS09320 04bd77085f106068cb99e6de7e9f3273 428 PANTHER PTHR10668 1 227 6.6E-51 T 22-04-2016 SCD_RS09320 04bd77085f106068cb99e6de7e9f3273 428 Gene3D G3DSA:3.50.50.60 296 386 1.1E-4 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS09320 04bd77085f106068cb99e6de7e9f3273 428 PANTHER PTHR10668:SF77 1 227 6.6E-51 T 22-04-2016 SCD_RS09320 04bd77085f106068cb99e6de7e9f3273 428 Gene3D G3DSA:3.40.50.720 7 100 2.6E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS09320 04bd77085f106068cb99e6de7e9f3273 428 Gene3D G3DSA:3.40.50.720 179 269 2.6E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS09320 04bd77085f106068cb99e6de7e9f3273 428 SUPERFAMILY SSF51905 8 385 1.81E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS09320 04bd77085f106068cb99e6de7e9f3273 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 4.93E-6 T 22-04-2016 SCD_RS09320 04bd77085f106068cb99e6de7e9f3273 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 351 367 4.93E-6 T 22-04-2016 SCD_RS05880 094464c022bd945464afe7a9c9e81dab 479 PANTHER PTHR21666:SF215 262 444 6.4E-88 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 SCD_RS05880 094464c022bd945464afe7a9c9e81dab 479 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 255 5.6E-40 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SCD_RS05880 094464c022bd945464afe7a9c9e81dab 479 Gene3D G3DSA:3.40.190.10 28 108 2.9E-25 T 22-04-2016 SCD_RS05880 094464c022bd945464afe7a9c9e81dab 479 Gene3D G3DSA:3.40.190.10 214 247 2.9E-25 T 22-04-2016 SCD_RS05880 094464c022bd945464afe7a9c9e81dab 479 Pfam PF01464 Transglycosylase SLT domain 281 384 1.6E-21 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 SCD_RS05880 094464c022bd945464afe7a9c9e81dab 479 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 2 467 44.996 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 SCD_RS05880 094464c022bd945464afe7a9c9e81dab 479 Gene3D G3DSA:3.40.190.10 109 195 6.9E-10 T 22-04-2016 SCD_RS05880 094464c022bd945464afe7a9c9e81dab 479 PANTHER PTHR21666 262 444 6.4E-88 T 22-04-2016 SCD_RS05880 094464c022bd945464afe7a9c9e81dab 479 Gene3D G3DSA:1.10.530.10 419 440 2.3E-34 T 22-04-2016 SCD_RS05880 094464c022bd945464afe7a9c9e81dab 479 Gene3D G3DSA:1.10.530.10 248 384 2.3E-34 T 22-04-2016 SCD_RS05880 094464c022bd945464afe7a9c9e81dab 479 SUPERFAMILY SSF53955 235 384 3.19E-32 T 22-04-2016 IPR023346 Lysozyme-like domain SCD_RS05880 094464c022bd945464afe7a9c9e81dab 479 SUPERFAMILY SSF53850 32 255 3.72E-49 T 22-04-2016 SCD_RS05880 094464c022bd945464afe7a9c9e81dab 479 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 299 327 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 SCD_RS05880 094464c022bd945464afe7a9c9e81dab 479 SMART SM00062 31 256 1.9E-34 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SCD_RS11455 2d78b53364bcfb0cdeac6e397b1c417b 600 PANTHER PTHR10799 139 428 1.1E-46 T 22-04-2016 SCD_RS11455 2d78b53364bcfb0cdeac6e397b1c417b 600 PANTHER PTHR10799 460 479 1.1E-46 T 22-04-2016 SCD_RS11455 2d78b53364bcfb0cdeac6e397b1c417b 600 Gene3D G3DSA:3.30.450.40 3 182 1.0E-13 T 22-04-2016 IPR029016 GAF domain-like SCD_RS11455 2d78b53364bcfb0cdeac6e397b1c417b 600 Pfam PF00563 EAL domain 355 595 3.7E-51 T 22-04-2016 IPR001633 EAL domain SCD_RS11455 2d78b53364bcfb0cdeac6e397b1c417b 600 PANTHER PTHR10799:SF710 139 428 1.1E-46 T 22-04-2016 SCD_RS11455 2d78b53364bcfb0cdeac6e397b1c417b 600 PANTHER PTHR10799:SF710 460 479 1.1E-46 T 22-04-2016 SCD_RS11455 2d78b53364bcfb0cdeac6e397b1c417b 600 Pfam PF00990 Diguanylate cyclase, GGDEF domain 182 339 5.6E-47 T 22-04-2016 IPR000160 GGDEF domain SCD_RS11455 2d78b53364bcfb0cdeac6e397b1c417b 600 SMART SM00267 171 343 1.4E-57 T 22-04-2016 IPR000160 GGDEF domain SCD_RS11455 2d78b53364bcfb0cdeac6e397b1c417b 600 SMART SM00052 348 600 2.7E-43 T 22-04-2016 IPR001633 EAL domain SCD_RS11455 2d78b53364bcfb0cdeac6e397b1c417b 600 SUPERFAMILY SSF55781 27 181 9.32E-11 T 22-04-2016 IPR029016 GAF domain-like SCD_RS11455 2d78b53364bcfb0cdeac6e397b1c417b 600 SUPERFAMILY SSF141868 355 596 1.18E-57 T 22-04-2016 IPR001633 EAL domain SCD_RS11455 2d78b53364bcfb0cdeac6e397b1c417b 600 SUPERFAMILY SSF55073 187 342 8.63E-50 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS11455 2d78b53364bcfb0cdeac6e397b1c417b 600 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 178 341 7.9E-52 T 22-04-2016 IPR000160 GGDEF domain SCD_RS11455 2d78b53364bcfb0cdeac6e397b1c417b 600 Gene3D G3DSA:3.20.20.450 352 597 4.4E-60 T 22-04-2016 IPR001633 EAL domain SCD_RS11455 2d78b53364bcfb0cdeac6e397b1c417b 600 Gene3D G3DSA:3.30.70.270 184 343 2.1E-55 T 22-04-2016 SCD_RS03495 aceca98fa65b4236a62fae3f4b06a5f3 295 PANTHER PTHR34383 27 291 1.5E-113 T 22-04-2016 SCD_RS03495 aceca98fa65b4236a62fae3f4b06a5f3 295 PIRSF PIRSF028756 3 294 1.3E-83 T 22-04-2016 IPR016898 Polyphosphate kinase 2 SCD_RS03495 aceca98fa65b4236a62fae3f4b06a5f3 295 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 6 279 1.8E-120 T 22-04-2016 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 SCD_RS03495 aceca98fa65b4236a62fae3f4b06a5f3 295 Gene3D G3DSA:3.40.50.300 4 287 1.4E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03495 aceca98fa65b4236a62fae3f4b06a5f3 295 SUPERFAMILY SSF52540 65 258 4.58E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03495 aceca98fa65b4236a62fae3f4b06a5f3 295 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 31 265 3.8E-66 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related SCD_RS12155 4433e05894a8cfd12d2dc8718c995076 256 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 225 1.3E-61 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SCD_RS12155 4433e05894a8cfd12d2dc8718c995076 256 Gene3D G3DSA:1.10.1270.20 165 252 2.0E-36 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SCD_RS12155 4433e05894a8cfd12d2dc8718c995076 256 PANTHER PTHR32125 1 232 2.4E-108 T 22-04-2016 SCD_RS12155 4433e05894a8cfd12d2dc8718c995076 256 PIRSF PIRSF000386 1 256 2.1E-97 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SCD_RS12155 4433e05894a8cfd12d2dc8718c995076 256 PANTHER PTHR32125:SF1 1 232 2.4E-108 T 22-04-2016 SCD_RS12155 4433e05894a8cfd12d2dc8718c995076 256 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 2 236 1.6E-93 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SCD_RS12155 4433e05894a8cfd12d2dc8718c995076 256 SUPERFAMILY SSF75217 2 251 6.15E-97 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SCD_RS12155 4433e05894a8cfd12d2dc8718c995076 256 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 256 110.581 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SCD_RS12155 4433e05894a8cfd12d2dc8718c995076 256 Gene3D G3DSA:3.40.1280.10 2 164 8.5E-62 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SCD_RS00550 07c5d4fb1181e7cae9dddd1066f6995f 437 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 242 323 1.3E-24 T 22-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 SCD_RS00550 07c5d4fb1181e7cae9dddd1066f6995f 437 PANTHER PTHR32305:SF6 38 326 1.8E-25 T 22-04-2016 SCD_RS00550 07c5d4fb1181e7cae9dddd1066f6995f 437 PRINTS PR00394 RHS protein signature 290 309 2.4E-7 T 22-04-2016 IPR001826 RHS protein SCD_RS00550 07c5d4fb1181e7cae9dddd1066f6995f 437 PRINTS PR00394 RHS protein signature 208 228 2.4E-7 T 22-04-2016 IPR001826 RHS protein SCD_RS00550 07c5d4fb1181e7cae9dddd1066f6995f 437 PANTHER PTHR32305 38 326 1.8E-25 T 22-04-2016 SCD_RS05155 9dff068a35c4413a84484456d1237f45 331 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 242 1.5E-45 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SCD_RS05155 9dff068a35c4413a84484456d1237f45 331 Gene3D G3DSA:3.40.50.720 3 171 5.0E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS05155 9dff068a35c4413a84484456d1237f45 331 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 2 330 59.284 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 SCD_RS05155 9dff068a35c4413a84484456d1237f45 331 Gene3D G3DSA:3.90.25.10 172 312 1.1E-33 T 22-04-2016 SCD_RS05155 9dff068a35c4413a84484456d1237f45 331 PANTHER PTHR10366 2 331 3.9E-98 T 22-04-2016 SCD_RS05155 9dff068a35c4413a84484456d1237f45 331 PANTHER PTHR10366:SF469 2 331 3.9E-98 T 22-04-2016 SCD_RS05155 9dff068a35c4413a84484456d1237f45 331 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 4 329 6.4E-134 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 SCD_RS05155 9dff068a35c4413a84484456d1237f45 331 SUPERFAMILY SSF51735 3 329 1.46E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS11115 fd8e0f33a71a937df013eb3fb45a3211 146 SUPERFAMILY SSF52833 21 102 3.36E-6 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS11115 fd8e0f33a71a937df013eb3fb45a3211 146 Pfam PF04214 Protein of unknown function, DUF 52 120 1.4E-32 T 22-04-2016 IPR007332 Protein of unknown function DUF411 SCD_RS09730 92f7c1e18abe8fa6f295fae2962c3df1 332 PANTHER PTHR30040 1 325 5.0E-78 T 22-04-2016 SCD_RS09730 92f7c1e18abe8fa6f295fae2962c3df1 332 SUPERFAMILY SSF143631 33 326 3.92E-71 T 22-04-2016 IPR003374 ApbE-like domain SCD_RS09730 92f7c1e18abe8fa6f295fae2962c3df1 332 PIRSF PIRSF006268 5 330 1.2E-58 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SCD_RS09730 92f7c1e18abe8fa6f295fae2962c3df1 332 PANTHER PTHR30040:SF2 1 325 5.0E-78 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SCD_RS09730 92f7c1e18abe8fa6f295fae2962c3df1 332 Pfam PF02424 ApbE family 43 317 1.1E-55 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SCD_RS00145 a98069531f39012e07825a9a37755c39 260 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 253 5.3E-85 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SCD_RS00145 a98069531f39012e07825a9a37755c39 260 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 258 6.6E-82 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SCD_RS00145 a98069531f39012e07825a9a37755c39 260 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 259 20.048 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SCD_RS00145 a98069531f39012e07825a9a37755c39 260 PANTHER PTHR30589 1 258 7.1E-105 T 22-04-2016 SCD_RS00145 a98069531f39012e07825a9a37755c39 260 PANTHER PTHR30589:SF0 1 258 7.1E-105 T 22-04-2016 SCD_RS00145 a98069531f39012e07825a9a37755c39 260 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 139 151 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SCD_RS03525 806e14354d2fe03037b0820f468305dd 136 Pfam PF04120 Low affinity iron permease 8 127 5.8E-53 T 22-04-2016 IPR007251 Low affinity iron permease, Fet4 GO:0055085 SCD_RS09905 ba3efe1e1c41e0a299367218518aaf8c 508 PANTHER PTHR22773 1 499 1.2E-112 T 22-04-2016 SCD_RS09905 ba3efe1e1c41e0a299367218518aaf8c 508 PANTHER PTHR22773:SF49 1 499 1.2E-112 T 22-04-2016 SCD_RS09905 ba3efe1e1c41e0a299367218518aaf8c 508 Pfam PF00361 Proton-conducting membrane transporter 127 407 3.9E-34 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SCD_RS09905 ba3efe1e1c41e0a299367218518aaf8c 508 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 376 402 7.9E-10 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SCD_RS09905 ba3efe1e1c41e0a299367218518aaf8c 508 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 7.9E-10 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SCD_RS09905 ba3efe1e1c41e0a299367218518aaf8c 508 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 162 186 7.9E-10 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SCD_RS09905 ba3efe1e1c41e0a299367218518aaf8c 508 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 132 151 7.9E-10 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SCD_RS11025 9d375dc2ae08b500f1b9a24bc73bc721 1308 Pfam PF04408 Helicase associated domain (HA2) 457 542 8.8E-20 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 SCD_RS11025 9d375dc2ae08b500f1b9a24bc73bc721 1308 Pfam PF11898 Domain of unknown function (DUF3418) 698 1304 2.7E-214 T 22-04-2016 IPR024590 RNA helicase HrpA, C-terminal SCD_RS11025 9d375dc2ae08b500f1b9a24bc73bc721 1308 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 1 920 0.0 T 22-04-2016 IPR010222 RNA helicase HrpA GO:0004004 SCD_RS11025 9d375dc2ae08b500f1b9a24bc73bc721 1308 SMART SM00382 74 360 1.2E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS11025 9d375dc2ae08b500f1b9a24bc73bc721 1308 Pfam PF00271 Helicase conserved C-terminal domain 276 393 1.9E-10 T 22-04-2016 IPR001650 Helicase, C-terminal SCD_RS11025 9d375dc2ae08b500f1b9a24bc73bc721 1308 Pfam PF00270 DEAD/DEAH box helicase 70 215 5.2E-7 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SCD_RS11025 9d375dc2ae08b500f1b9a24bc73bc721 1308 SMART SM00487 57 241 6.6E-25 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SCD_RS11025 9d375dc2ae08b500f1b9a24bc73bc721 1308 PANTHER PTHR18934:SF109 58 694 0.0 T 22-04-2016 SCD_RS11025 9d375dc2ae08b500f1b9a24bc73bc721 1308 PANTHER PTHR18934:SF109 724 852 0.0 T 22-04-2016 SCD_RS11025 9d375dc2ae08b500f1b9a24bc73bc721 1308 SMART SM00847 454 544 7.6E-37 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 SCD_RS11025 9d375dc2ae08b500f1b9a24bc73bc721 1308 Gene3D G3DSA:3.40.50.300 262 407 4.2E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11025 9d375dc2ae08b500f1b9a24bc73bc721 1308 Gene3D G3DSA:3.40.50.300 58 216 2.0E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11025 9d375dc2ae08b500f1b9a24bc73bc721 1308 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 568 681 4.1E-18 T 22-04-2016 IPR011709 Domain of unknown function DUF1605 SCD_RS11025 9d375dc2ae08b500f1b9a24bc73bc721 1308 PANTHER PTHR18934 58 694 0.0 T 22-04-2016 SCD_RS11025 9d375dc2ae08b500f1b9a24bc73bc721 1308 PANTHER PTHR18934 724 852 0.0 T 22-04-2016 SCD_RS11025 9d375dc2ae08b500f1b9a24bc73bc721 1308 SMART SM00490 294 394 1.0E-13 T 22-04-2016 IPR001650 Helicase, C-terminal SCD_RS11025 9d375dc2ae08b500f1b9a24bc73bc721 1308 SUPERFAMILY SSF52540 56 552 5.46E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11025 9d375dc2ae08b500f1b9a24bc73bc721 1308 SUPERFAMILY SSF52540 635 668 5.46E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03745 9a73c868892f9ac3dfbb4c5f0c0020ea 352 PANTHER PTHR21535 63 352 1.1E-76 T 22-04-2016 SCD_RS03745 9a73c868892f9ac3dfbb4c5f0c0020ea 352 Pfam PF01544 CorA-like Mg2+ transporter protein 60 348 4.2E-76 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 SCD_RS03745 9a73c868892f9ac3dfbb4c5f0c0020ea 352 Gene3D G3DSA:1.20.58.340 276 352 1.1E-33 T 22-04-2016 SCD_RS03745 9a73c868892f9ac3dfbb4c5f0c0020ea 352 Gene3D G3DSA:1.20.58.340 164 273 5.4E-41 T 22-04-2016 SCD_RS03745 9a73c868892f9ac3dfbb4c5f0c0020ea 352 SUPERFAMILY SSF144083 287 350 4.18E-23 T 22-04-2016 SCD_RS03745 9a73c868892f9ac3dfbb4c5f0c0020ea 352 PANTHER PTHR21535:SF33 63 352 1.1E-76 T 22-04-2016 SCD_RS03745 9a73c868892f9ac3dfbb4c5f0c0020ea 352 SUPERFAMILY SSF143865 10 286 1.11E-85 T 22-04-2016 SCD_RS03745 9a73c868892f9ac3dfbb4c5f0c0020ea 352 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 32 352 1.1E-100 T 22-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 SCD_RS03745 9a73c868892f9ac3dfbb4c5f0c0020ea 352 Gene3D G3DSA:3.30.460.20 4 163 7.7E-47 T 22-04-2016 SCD_RS12480 5674af111da6ac7ca4ab0a60f295d754 208 PANTHER PTHR11237:SF3 4 208 1.1E-89 T 22-04-2016 SCD_RS12480 5674af111da6ac7ca4ab0a60f295d754 208 SUPERFAMILY SSF47240 54 178 3.57E-18 T 22-04-2016 IPR009078 Ferritin-like superfamily SCD_RS12480 5674af111da6ac7ca4ab0a60f295d754 208 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 8 208 31.026 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 SCD_RS12480 5674af111da6ac7ca4ab0a60f295d754 208 Gene3D G3DSA:1.20.1260.10 53 176 1.6E-12 T 22-04-2016 IPR012347 Ferritin-related SCD_RS12480 5674af111da6ac7ca4ab0a60f295d754 208 PANTHER PTHR11237 4 208 1.1E-89 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 SCD_RS12480 5674af111da6ac7ca4ab0a60f295d754 208 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 48 205 1.0E-41 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 SCD_RS09810 aa231bb14657e258ad879b49926931ab 216 Pfam PF04205 FMN-binding domain 105 194 6.2E-17 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 SCD_RS09810 aa231bb14657e258ad879b49926931ab 216 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 15 198 3.8E-60 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 SCD_RS09810 aa231bb14657e258ad879b49926931ab 216 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 6 199 24.679 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 SCD_RS09810 aa231bb14657e258ad879b49926931ab 216 PANTHER PTHR36118 1 216 3.3E-58 T 22-04-2016 SCD_RS09810 aa231bb14657e258ad879b49926931ab 216 PIRSF PIRSF006091 2 210 4.8E-73 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 SCD_RS09810 aa231bb14657e258ad879b49926931ab 216 PANTHER PTHR36118:SF1 1 216 3.3E-58 T 22-04-2016 SCD_RS09810 aa231bb14657e258ad879b49926931ab 216 SMART SM00900 105 197 8.0E-30 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 SCD_RS13175 0c85b97ec8d79d4cafa546c42b0a7057 257 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 3 253 40.295 T 22-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 SCD_RS13175 0c85b97ec8d79d4cafa546c42b0a7057 257 Pfam PF12697 Alpha/beta hydrolase family 16 246 7.3E-19 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SCD_RS13175 0c85b97ec8d79d4cafa546c42b0a7057 257 SUPERFAMILY SSF53474 3 252 7.6E-56 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SCD_RS13175 0c85b97ec8d79d4cafa546c42b0a7057 257 Gene3D G3DSA:3.40.50.1820 3 252 3.1E-59 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SCD_RS13175 0c85b97ec8d79d4cafa546c42b0a7057 257 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 250 5.9E-79 T 22-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 SCD_RS13175 0c85b97ec8d79d4cafa546c42b0a7057 257 PANTHER PTHR10992 5 254 3.0E-61 T 22-04-2016 SCD_RS13175 0c85b97ec8d79d4cafa546c42b0a7057 257 PANTHER PTHR10992:SF812 5 254 3.0E-61 T 22-04-2016 SCD_RS03080 199199dc473617c76ee075cf5cfd38dc 125 PIRSF PIRSF002133 1 124 2.1E-54 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03080 199199dc473617c76ee075cf5cfd38dc 125 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 1.1E-69 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SCD_RS03080 199199dc473617c76ee075cf5cfd38dc 125 Pfam PF00164 Ribosomal protein S12/S23 3 123 6.3E-43 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03080 199199dc473617c76ee075cf5cfd38dc 125 SUPERFAMILY SSF50249 2 123 4.37E-52 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS03080 199199dc473617c76ee075cf5cfd38dc 125 Gene3D G3DSA:2.40.50.140 1 123 6.2E-66 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS03080 199199dc473617c76ee075cf5cfd38dc 125 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03080 199199dc473617c76ee075cf5cfd38dc 125 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.878 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SCD_RS03080 199199dc473617c76ee075cf5cfd38dc 125 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.4E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SCD_RS03080 199199dc473617c76ee075cf5cfd38dc 125 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.4E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SCD_RS03080 199199dc473617c76ee075cf5cfd38dc 125 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.4E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SCD_RS03080 199199dc473617c76ee075cf5cfd38dc 125 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.4E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SCD_RS03080 199199dc473617c76ee075cf5cfd38dc 125 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.4E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SCD_RS03080 199199dc473617c76ee075cf5cfd38dc 125 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.4E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SCD_RS03080 199199dc473617c76ee075cf5cfd38dc 125 PANTHER PTHR11652 1 116 7.9E-78 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS09275 ee16bac4d62abd12e1f9c2a64a08584b 1147 Gene3D G3DSA:1.10.150.280 830 867 3.0E-5 T 22-04-2016 SCD_RS09275 ee16bac4d62abd12e1f9c2a64a08584b 1147 Pfam PF02811 PHP domain 8 173 1.8E-41 T 22-04-2016 IPR004013 PHP domain GO:0003824 SCD_RS09275 ee16bac4d62abd12e1f9c2a64a08584b 1147 Gene3D G3DSA:2.40.50.140 975 1065 1.5E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS09275 ee16bac4d62abd12e1f9c2a64a08584b 1147 Pfam PF14579 Helix-hairpin-helix motif 804 893 2.9E-27 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS09275 ee16bac4d62abd12e1f9c2a64a08584b 1147 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 293 730 2.6E-172 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS09275 ee16bac4d62abd12e1f9c2a64a08584b 1147 SUPERFAMILY SSF89550 154 264 6.47E-10 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SCD_RS09275 ee16bac4d62abd12e1f9c2a64a08584b 1147 SUPERFAMILY SSF89550 6 123 6.47E-10 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SCD_RS09275 ee16bac4d62abd12e1f9c2a64a08584b 1147 PANTHER PTHR32294 3 1147 0.0 T 22-04-2016 SCD_RS09275 ee16bac4d62abd12e1f9c2a64a08584b 1147 PANTHER PTHR32294:SF0 3 1147 0.0 T 22-04-2016 SCD_RS09275 ee16bac4d62abd12e1f9c2a64a08584b 1147 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1022 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS09275 ee16bac4d62abd12e1f9c2a64a08584b 1147 Gene3D G3DSA:3.20.20.140 6 258 9.6E-16 T 22-04-2016 SCD_RS09275 ee16bac4d62abd12e1f9c2a64a08584b 1147 Pfam PF01336 OB-fold nucleic acid binding domain 986 1061 8.6E-10 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SCD_RS09275 ee16bac4d62abd12e1f9c2a64a08584b 1147 SMART SM00481 7 74 9.5E-21 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 SCD_RS05065 7d13f49df8d7b9dde710d1572082ed93 235 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 12 229 4.4E-86 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 SCD_RS05065 7d13f49df8d7b9dde710d1572082ed93 235 Pfam PF13489 Methyltransferase domain 50 201 5.4E-24 T 22-04-2016 SCD_RS05065 7d13f49df8d7b9dde710d1572082ed93 235 PANTHER PTHR10108:SF910 5 231 4.5E-124 T 22-04-2016 SCD_RS05065 7d13f49df8d7b9dde710d1572082ed93 235 PANTHER PTHR10108 5 231 4.5E-124 T 22-04-2016 SCD_RS05065 7d13f49df8d7b9dde710d1572082ed93 235 Gene3D G3DSA:3.40.50.150 23 218 5.7E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS05065 7d13f49df8d7b9dde710d1572082ed93 235 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 10 235 38.403 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 SCD_RS05065 7d13f49df8d7b9dde710d1572082ed93 235 SUPERFAMILY SSF53335 14 214 8.44E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS01870 94d2fdf2a56c4fef6ec281dbecd7f7bc 232 Gene3D G3DSA:2.60.120.10 9 145 2.1E-34 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SCD_RS01870 94d2fdf2a56c4fef6ec281dbecd7f7bc 232 Pfam PF00027 Cyclic nucleotide-binding domain 35 116 2.6E-19 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SCD_RS01870 94d2fdf2a56c4fef6ec281dbecd7f7bc 232 PANTHER PTHR24567 7 228 1.1E-41 T 22-04-2016 SCD_RS01870 94d2fdf2a56c4fef6ec281dbecd7f7bc 232 SMART SM00100 14 132 5.6E-16 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SCD_RS01870 94d2fdf2a56c4fef6ec281dbecd7f7bc 232 Pfam PF13545 Crp-like helix-turn-helix domain 152 225 8.4E-17 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SCD_RS01870 94d2fdf2a56c4fef6ec281dbecd7f7bc 232 SMART SM00419 170 218 1.2E-9 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SCD_RS01870 94d2fdf2a56c4fef6ec281dbecd7f7bc 232 SUPERFAMILY SSF51206 8 142 1.13E-33 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like SCD_RS01870 94d2fdf2a56c4fef6ec281dbecd7f7bc 232 Gene3D G3DSA:1.10.10.10 151 225 2.4E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS01870 94d2fdf2a56c4fef6ec281dbecd7f7bc 232 SUPERFAMILY SSF46785 150 226 6.34E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS02870 1e062241c5e1615110084279988e9fc0 211 Pfam PF05494 MlaC protein 36 197 1.3E-59 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC SCD_RS02870 1e062241c5e1615110084279988e9fc0 211 PANTHER PTHR36573 1 202 1.4E-42 T 22-04-2016 SCD_RS02870 1e062241c5e1615110084279988e9fc0 211 Gene3D G3DSA:1.10.10.640 173 204 1.0E-30 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical SCD_RS02870 1e062241c5e1615110084279988e9fc0 211 Gene3D G3DSA:1.10.10.640 74 114 1.0E-30 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical SCD_RS02870 1e062241c5e1615110084279988e9fc0 211 PIRSF PIRSF004649 1 211 1.4E-58 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC SCD_RS02870 1e062241c5e1615110084279988e9fc0 211 Gene3D G3DSA:3.10.450.50 29 73 1.7E-33 T 22-04-2016 IPR032710 NTF2-like domain SCD_RS02870 1e062241c5e1615110084279988e9fc0 211 Gene3D G3DSA:3.10.450.50 117 172 1.7E-33 T 22-04-2016 IPR032710 NTF2-like domain SCD_RS13870 40f161957fe83b368365a3bcdf413c1b 123 Pfam PF00717 Peptidase S24-like 35 95 2.9E-11 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B SCD_RS13870 40f161957fe83b368365a3bcdf413c1b 123 Gene3D G3DSA:2.10.109.10 28 110 1.3E-19 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SCD_RS13870 40f161957fe83b368365a3bcdf413c1b 123 SUPERFAMILY SSF51306 28 111 3.53E-20 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SCD_RS14555 dbfddc049f7630cb1a42f744e64366d9 364 SMART SM00842 19 187 8.2E-5 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 SCD_RS14555 dbfddc049f7630cb1a42f744e64366d9 364 PANTHER PTHR32432 7 364 1.1E-80 T 22-04-2016 SCD_RS14555 dbfddc049f7630cb1a42f744e64366d9 364 Gene3D G3DSA:3.30.420.40 15 115 2.7E-8 T 22-04-2016 SCD_RS14555 dbfddc049f7630cb1a42f744e64366d9 364 PANTHER PTHR32432:SF3 7 364 1.1E-80 T 22-04-2016 SCD_RS14555 dbfddc049f7630cb1a42f744e64366d9 364 Gene3D G3DSA:3.30.420.40 204 323 4.3E-27 T 22-04-2016 SCD_RS14555 dbfddc049f7630cb1a42f744e64366d9 364 Pfam PF11104 Type IV pilus assembly protein PilM; 21 361 6.7E-151 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM SCD_RS14555 dbfddc049f7630cb1a42f744e64366d9 364 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 19 361 4.1E-111 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM SCD_RS14555 dbfddc049f7630cb1a42f744e64366d9 364 SUPERFAMILY SSF53067 196 358 4.64E-25 T 22-04-2016 SCD_RS14555 dbfddc049f7630cb1a42f744e64366d9 364 PIRSF PIRSF019169 5 362 8.4E-135 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM SCD_RS14555 dbfddc049f7630cb1a42f744e64366d9 364 SUPERFAMILY SSF53067 20 184 2.78E-14 T 22-04-2016 SCD_RS09210 26277cfc68b3e056fe65238356929f84 155 SUPERFAMILY SSF52172 9 137 5.55E-27 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS09210 26277cfc68b3e056fe65238356929f84 155 Pfam PF00072 Response regulator receiver domain 10 133 7.4E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS09210 26277cfc68b3e056fe65238356929f84 155 SMART SM00448 8 133 1.5E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS09210 26277cfc68b3e056fe65238356929f84 155 PANTHER PTHR26402 8 136 7.8E-27 T 22-04-2016 SCD_RS09210 26277cfc68b3e056fe65238356929f84 155 Gene3D G3DSA:3.40.50.2300 9 136 6.1E-31 T 22-04-2016 SCD_RS09560 3793122e312c307d15b6bd46a6beae7e 151 PANTHER PTHR37691:SF1 3 151 2.7E-24 T 22-04-2016 SCD_RS09560 3793122e312c307d15b6bd46a6beae7e 151 Gene3D G3DSA:3.40.1260.10 39 151 1.1E-38 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS09560 3793122e312c307d15b6bd46a6beae7e 151 SUPERFAMILY SSF75169 40 151 2.52E-30 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS09560 3793122e312c307d15b6bd46a6beae7e 151 PANTHER PTHR37691 3 151 2.7E-24 T 22-04-2016 SCD_RS09560 3793122e312c307d15b6bd46a6beae7e 151 Pfam PF02635 DsrE/DsrF-like family 61 151 1.1E-12 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein SCD_RS03065 cfa71831e64416257346a47023100585 124 SUPERFAMILY SSF48300 4 60 1.96E-16 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03065 cfa71831e64416257346a47023100585 124 SUPERFAMILY SSF54736 53 124 3.31E-24 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SCD_RS03065 cfa71831e64416257346a47023100585 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 5.8E-30 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 SCD_RS03065 cfa71831e64416257346a47023100585 124 Gene3D G3DSA:1.20.5.710 2 51 1.3E-20 T 22-04-2016 SCD_RS03065 cfa71831e64416257346a47023100585 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 124 4.0E-22 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 SCD_RS03065 cfa71831e64416257346a47023100585 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 51 4.2E-18 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03065 cfa71831e64416257346a47023100585 124 Gene3D G3DSA:3.30.1390.10 52 124 7.9E-33 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SCD_RS03065 cfa71831e64416257346a47023100585 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 124 24.132 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03065 cfa71831e64416257346a47023100585 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 1.9E-48 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS10000 0c62714551137d2904bb32903c3b27d2 664 PANTHER PTHR22773:SF91 6 29 2.4E-161 T 22-04-2016 SCD_RS10000 0c62714551137d2904bb32903c3b27d2 664 PANTHER PTHR22773:SF91 58 607 2.4E-161 T 22-04-2016 SCD_RS10000 0c62714551137d2904bb32903c3b27d2 664 PANTHER PTHR22773 6 29 2.4E-161 T 22-04-2016 SCD_RS10000 0c62714551137d2904bb32903c3b27d2 664 PANTHER PTHR22773 58 607 2.4E-161 T 22-04-2016 SCD_RS10000 0c62714551137d2904bb32903c3b27d2 664 Pfam PF00361 Proton-conducting membrane transporter 129 412 5.0E-54 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SCD_RS10000 0c62714551137d2904bb32903c3b27d2 664 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 386 412 1.2E-7 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SCD_RS10000 0c62714551137d2904bb32903c3b27d2 664 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 166 190 1.2E-7 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SCD_RS10000 0c62714551137d2904bb32903c3b27d2 664 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 235 259 1.2E-7 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SCD_RS00610 e007d0b084ffff3ac8da3c3c4594c932 524 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 369 404 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SCD_RS00610 e007d0b084ffff3ac8da3c3c4594c932 524 SUPERFAMILY SSF53927 236 296 1.0E-24 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SCD_RS00610 e007d0b084ffff3ac8da3c3c4594c932 524 SUPERFAMILY SSF53927 365 422 1.0E-24 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SCD_RS00610 e007d0b084ffff3ac8da3c3c4594c932 524 Gene3D G3DSA:3.40.140.10 236 424 1.4E-32 T 22-04-2016 SCD_RS00610 e007d0b084ffff3ac8da3c3c4594c932 524 PANTHER PTHR11086 234 296 8.5E-28 T 22-04-2016 IPR015517 Deoxycytidylate deaminase-related SCD_RS00610 e007d0b084ffff3ac8da3c3c4594c932 524 PANTHER PTHR11086 354 418 8.5E-28 T 22-04-2016 IPR015517 Deoxycytidylate deaminase-related SCD_RS00610 e007d0b084ffff3ac8da3c3c4594c932 524 PANTHER PTHR11086:SF4 234 296 8.5E-28 T 22-04-2016 SCD_RS00610 e007d0b084ffff3ac8da3c3c4594c932 524 PANTHER PTHR11086:SF4 354 418 8.5E-28 T 22-04-2016 SCD_RS00610 e007d0b084ffff3ac8da3c3c4594c932 524 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 234 415 5.2E-15 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SCD_RS05045 c8ddb9222cce6e44e29f509ac8c0cb6c 334 Pfam PF02625 XdhC and CoxI family 16 82 5.8E-22 T 22-04-2016 IPR003777 XdhC- CoxI SCD_RS05045 c8ddb9222cce6e44e29f509ac8c0cb6c 334 PANTHER PTHR30388 6 311 1.1E-73 T 22-04-2016 SCD_RS05045 c8ddb9222cce6e44e29f509ac8c0cb6c 334 PANTHER PTHR30388:SF4 6 311 1.1E-73 T 22-04-2016 SCD_RS05045 c8ddb9222cce6e44e29f509ac8c0cb6c 334 Pfam PF13478 XdhC Rossmann domain 164 305 9.7E-38 T 22-04-2016 IPR027051 XdhC Rossmann domain SCD_RS05045 c8ddb9222cce6e44e29f509ac8c0cb6c 334 Gene3D G3DSA:3.40.50.20 162 213 1.8E-5 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SCD_RS14725 4eff0eaa5328b0f31e0f1fe9204fc140 1033 Gene3D G3DSA:3.90.550.10 3 239 6.7E-30 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS14725 4eff0eaa5328b0f31e0f1fe9204fc140 1033 Pfam PF00884 Sulfatase 553 896 1.2E-48 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SCD_RS14725 4eff0eaa5328b0f31e0f1fe9204fc140 1033 PANTHER PTHR10342 953 1032 1.1E-72 T 22-04-2016 SCD_RS14725 4eff0eaa5328b0f31e0f1fe9204fc140 1033 PANTHER PTHR10342 516 916 1.1E-72 T 22-04-2016 SCD_RS14725 4eff0eaa5328b0f31e0f1fe9204fc140 1033 Gene3D G3DSA:3.30.1120.10 974 1032 1.4E-10 T 22-04-2016 SCD_RS14725 4eff0eaa5328b0f31e0f1fe9204fc140 1033 SUPERFAMILY SSF53448 3 261 5.44E-37 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS14725 4eff0eaa5328b0f31e0f1fe9204fc140 1033 Pfam PF13641 Glycosyltransferase like family 2 5 232 4.2E-13 T 22-04-2016 SCD_RS14725 4eff0eaa5328b0f31e0f1fe9204fc140 1033 SUPERFAMILY SSF53649 974 1031 1.14E-89 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SCD_RS14725 4eff0eaa5328b0f31e0f1fe9204fc140 1033 SUPERFAMILY SSF53649 552 930 1.14E-89 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SCD_RS14725 4eff0eaa5328b0f31e0f1fe9204fc140 1033 Gene3D G3DSA:3.40.720.10 553 911 1.0E-66 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SCD_RS01600 e2a1e659456dc3f2fab0853a406dc367 315 SUPERFAMILY SSF52283 4 134 2.27E-28 T 22-04-2016 SCD_RS01600 e2a1e659456dc3f2fab0853a406dc367 315 SUPERFAMILY SSF51735 99 285 1.98E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS01600 e2a1e659456dc3f2fab0853a406dc367 315 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 192 214 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SCD_RS01600 e2a1e659456dc3f2fab0853a406dc367 315 PANTHER PTHR10996 1 308 1.7E-96 T 22-04-2016 SCD_RS01600 e2a1e659456dc3f2fab0853a406dc367 315 Gene3D G3DSA:3.40.50.720 108 287 2.1E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS01600 e2a1e659456dc3f2fab0853a406dc367 315 Gene3D G3DSA:3.40.50.720 4 107 8.1E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS01600 e2a1e659456dc3f2fab0853a406dc367 315 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 284 5.0E-56 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SCD_RS01600 e2a1e659456dc3f2fab0853a406dc367 315 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 221 237 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SCD_RS01600 e2a1e659456dc3f2fab0853a406dc367 315 PANTHER PTHR10996:SF91 1 308 1.7E-96 T 22-04-2016 SCD_RS01600 e2a1e659456dc3f2fab0853a406dc367 315 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 30 314 7.0E-25 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SCD_RS02545 70ff70be6454fc6e856a16335439e66e 203 Gene3D G3DSA:3.30.63.10 34 85 1.5E-25 T 22-04-2016 SCD_RS02545 70ff70be6454fc6e856a16335439e66e 203 PANTHER PTHR23117 1 202 4.4E-89 T 22-04-2016 SCD_RS02545 70ff70be6454fc6e856a16335439e66e 203 Hamap MF_00328 Guanylate kinase [gmk]. 2 185 36.112 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SCD_RS02545 70ff70be6454fc6e856a16335439e66e 203 ProSitePatterns PS00856 Guanylate kinase-like signature. 38 55 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SCD_RS02545 70ff70be6454fc6e856a16335439e66e 203 Pfam PF00625 Guanylate kinase 5 183 6.9E-50 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SCD_RS02545 70ff70be6454fc6e856a16335439e66e 203 SMART SM00072 3 185 1.9E-62 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SCD_RS02545 70ff70be6454fc6e856a16335439e66e 203 SUPERFAMILY SSF52540 4 186 1.8E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02545 70ff70be6454fc6e856a16335439e66e 203 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 182 4.7E-72 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SCD_RS02545 70ff70be6454fc6e856a16335439e66e 203 Gene3D G3DSA:3.40.50.300 86 201 1.5E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02545 70ff70be6454fc6e856a16335439e66e 203 Gene3D G3DSA:3.40.50.300 1 26 1.5E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08320 ebbf710429bd89d7409345933e18540b 257 Gene3D G3DSA:1.10.287.110 196 253 4.6E-16 T 22-04-2016 IPR001623 DnaJ domain SCD_RS08320 ebbf710429bd89d7409345933e18540b 257 PANTHER PTHR24078 146 252 5.1E-13 T 22-04-2016 SCD_RS08320 ebbf710429bd89d7409345933e18540b 257 Pfam PF05099 Tellurite resistance protein TerB 43 169 1.2E-23 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal SCD_RS08320 ebbf710429bd89d7409345933e18540b 257 PANTHER PTHR24078:SF231 146 252 5.1E-13 T 22-04-2016 SCD_RS08320 ebbf710429bd89d7409345933e18540b 257 SMART SM00271 191 256 1.8E-17 T 22-04-2016 IPR001623 DnaJ domain SCD_RS08320 ebbf710429bd89d7409345933e18540b 257 SUPERFAMILY SSF158682 5 206 7.85E-33 T 22-04-2016 IPR029024 TerB-like SCD_RS08320 ebbf710429bd89d7409345933e18540b 257 PRINTS PR00625 DnaJ domain signature 236 256 2.6E-11 T 22-04-2016 IPR001623 DnaJ domain SCD_RS08320 ebbf710429bd89d7409345933e18540b 257 PRINTS PR00625 DnaJ domain signature 194 212 2.6E-11 T 22-04-2016 IPR001623 DnaJ domain SCD_RS08320 ebbf710429bd89d7409345933e18540b 257 PRINTS PR00625 DnaJ domain signature 212 227 2.6E-11 T 22-04-2016 IPR001623 DnaJ domain SCD_RS08320 ebbf710429bd89d7409345933e18540b 257 SUPERFAMILY SSF46565 189 253 7.63E-17 T 22-04-2016 IPR001623 DnaJ domain SCD_RS08320 ebbf710429bd89d7409345933e18540b 257 Pfam PF00226 DnaJ domain 192 253 2.3E-13 T 22-04-2016 IPR001623 DnaJ domain SCD_RS08320 ebbf710429bd89d7409345933e18540b 257 Gene3D G3DSA:1.10.3680.10 17 195 1.4E-29 T 22-04-2016 IPR029024 TerB-like SCD_RS01430 b00c30348bfa4510018386378f970456 412 SUPERFAMILY SSF160996 199 349 1.22E-9 T 22-04-2016 SCD_RS01430 b00c30348bfa4510018386378f970456 412 SUPERFAMILY SSF51905 349 405 1.77E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS01430 b00c30348bfa4510018386378f970456 412 SUPERFAMILY SSF51905 9 195 1.77E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS01430 b00c30348bfa4510018386378f970456 412 PRINTS PR00419 Adrenodoxin reductase family signature 31 44 3.3E-8 T 22-04-2016 SCD_RS01430 b00c30348bfa4510018386378f970456 412 PRINTS PR00419 Adrenodoxin reductase family signature 8 30 3.3E-8 T 22-04-2016 SCD_RS01430 b00c30348bfa4510018386378f970456 412 PRINTS PR00419 Adrenodoxin reductase family signature 163 177 3.3E-8 T 22-04-2016 SCD_RS01430 b00c30348bfa4510018386378f970456 412 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 29 409 4.2E-166 T 22-04-2016 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 SCD_RS01430 b00c30348bfa4510018386378f970456 412 Pfam PF03486 HI0933-like protein 9 403 2.6E-109 T 22-04-2016 SCD_RS01430 b00c30348bfa4510018386378f970456 412 Gene3D G3DSA:3.50.50.60 371 404 5.6E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS01430 b00c30348bfa4510018386378f970456 412 Gene3D G3DSA:3.50.50.60 9 213 5.6E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS01430 b00c30348bfa4510018386378f970456 412 PANTHER PTHR10617:SF103 342 409 8.7E-59 T 22-04-2016 SCD_RS01430 b00c30348bfa4510018386378f970456 412 PANTHER PTHR10617:SF103 11 310 8.7E-59 T 22-04-2016 SCD_RS01430 b00c30348bfa4510018386378f970456 412 PANTHER PTHR10617 342 409 8.7E-59 T 22-04-2016 SCD_RS01430 b00c30348bfa4510018386378f970456 412 PANTHER PTHR10617 11 310 8.7E-59 T 22-04-2016 SCD_RS01430 b00c30348bfa4510018386378f970456 412 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 10 402 3.8E-86 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like SCD_RS13590 b00d6187156ad7e17092b3733042d520 456 SMART SM00448 3 113 2.8E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS13590 b00d6187156ad7e17092b3733042d520 456 Pfam PF02954 Bacterial regulatory protein, Fis family 412 451 1.2E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS13590 b00d6187156ad7e17092b3733042d520 456 Pfam PF00072 Response regulator receiver domain 5 112 9.1E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS13590 b00d6187156ad7e17092b3733042d520 456 SUPERFAMILY SSF46689 355 452 1.76E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS13590 b00d6187156ad7e17092b3733042d520 456 Pfam PF00158 Sigma-54 interaction domain 142 308 6.8E-65 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SCD_RS13590 b00d6187156ad7e17092b3733042d520 456 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SCD_RS13590 b00d6187156ad7e17092b3733042d520 456 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 434 454 9.9E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS13590 b00d6187156ad7e17092b3733042d520 456 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 417 434 9.9E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS13590 b00d6187156ad7e17092b3733042d520 456 SUPERFAMILY SSF52172 3 187 2.42E-36 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS13590 b00d6187156ad7e17092b3733042d520 456 PANTHER PTHR32071 1 452 1.0E-169 T 22-04-2016 SCD_RS13590 b00d6187156ad7e17092b3733042d520 456 SUPERFAMILY SSF52540 141 384 3.47E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13590 b00d6187156ad7e17092b3733042d520 456 Gene3D G3DSA:3.40.50.300 140 314 1.3E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13590 b00d6187156ad7e17092b3733042d520 456 SMART SM00382 162 305 7.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS13590 b00d6187156ad7e17092b3733042d520 456 Gene3D G3DSA:1.10.10.60 396 452 1.3E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS13590 b00d6187156ad7e17092b3733042d520 456 Gene3D G3DSA:1.10.8.60 315 385 4.0E-21 T 22-04-2016 SCD_RS13590 b00d6187156ad7e17092b3733042d520 456 Gene3D G3DSA:3.40.50.2300 4 132 1.5E-30 T 22-04-2016 SCD_RS02755 34db59402bf3be27b5d8bc2939a2492d 150 Gene3D G3DSA:3.40.930.10 3 149 2.0E-40 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SCD_RS02755 34db59402bf3be27b5d8bc2939a2492d 150 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 10 148 2.3E-31 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SCD_RS02755 34db59402bf3be27b5d8bc2939a2492d 150 PANTHER PTHR30505:SF6 1 150 1.1E-41 T 22-04-2016 SCD_RS02755 34db59402bf3be27b5d8bc2939a2492d 150 SUPERFAMILY SSF55804 4 149 4.19E-38 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SCD_RS02755 34db59402bf3be27b5d8bc2939a2492d 150 PANTHER PTHR30505 1 150 1.1E-41 T 22-04-2016 SCD_RS00870 14c6e1a31634dee8af268ac9525fc1f9 360 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 266 7.0E-25 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SCD_RS00870 14c6e1a31634dee8af268ac9525fc1f9 360 PANTHER PTHR30469:SF15 1 360 1.8E-59 T 22-04-2016 SCD_RS00870 14c6e1a31634dee8af268ac9525fc1f9 360 Gene3D G3DSA:2.40.50.100 72 103 1.8E-16 T 22-04-2016 SCD_RS00870 14c6e1a31634dee8af268ac9525fc1f9 360 Gene3D G3DSA:2.40.50.100 164 195 1.8E-16 T 22-04-2016 SCD_RS00870 14c6e1a31634dee8af268ac9525fc1f9 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 349 2.2E-65 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SCD_RS00870 14c6e1a31634dee8af268ac9525fc1f9 360 PANTHER PTHR30469 1 360 1.8E-59 T 22-04-2016 SCD_RS00870 14c6e1a31634dee8af268ac9525fc1f9 360 SUPERFAMILY SSF111369 62 263 2.62E-24 T 22-04-2016 SCD_RS01720 73e83aea3146902e69d9560550610005 361 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 10 322 1.1E-40 T 22-04-2016 SCD_RS01720 73e83aea3146902e69d9560550610005 361 SUPERFAMILY SSF51604 127 345 8.12E-47 T 22-04-2016 IPR029065 Enolase C-terminal domain-like SCD_RS01720 73e83aea3146902e69d9560550610005 361 Gene3D G3DSA:3.20.20.120 115 346 2.2E-53 T 22-04-2016 IPR029065 Enolase C-terminal domain-like SCD_RS01720 73e83aea3146902e69d9560550610005 361 PANTHER PTHR13794 1 345 1.1E-51 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 SCD_RS01720 73e83aea3146902e69d9560550610005 361 SMART SM00922 137 234 2.2E-13 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal SCD_RS01720 73e83aea3146902e69d9560550610005 361 Gene3D G3DSA:3.30.390.10 4 114 2.9E-24 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SCD_RS01720 73e83aea3146902e69d9560550610005 361 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 33 117 1.8E-5 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain SCD_RS01720 73e83aea3146902e69d9560550610005 361 SUPERFAMILY SSF54826 2 119 1.36E-20 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SCD_RS01720 73e83aea3146902e69d9560550610005 361 Pfam PF13378 Enolase C-terminal domain-like 140 348 3.7E-26 T 22-04-2016 IPR029065 Enolase C-terminal domain-like SCD_RS01720 73e83aea3146902e69d9560550610005 361 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 184 215 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 SCD_RS12465 90a401eda71433d119ca40efd6bc10de 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 SCD_RS12465 90a401eda71433d119ca40efd6bc10de 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 6.7E-46 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SCD_RS12465 90a401eda71433d119ca40efd6bc10de 130 Gene3D G3DSA:3.30.230.10 5 130 7.1E-50 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SCD_RS12465 90a401eda71433d119ca40efd6bc10de 130 SUPERFAMILY SSF54211 5 130 2.5E-45 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SCD_RS12465 90a401eda71433d119ca40efd6bc10de 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 31.851 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid SCD_RS12465 90a401eda71433d119ca40efd6bc10de 130 PANTHER PTHR21569 6 130 7.5E-65 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SCD_RS03695 240d7ecadb470851318ab026a0a91719 115 Gene3D G3DSA:1.10.10.10 47 97 8.4E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS03695 240d7ecadb470851318ab026a0a91719 115 SUPERFAMILY SSF46785 45 93 1.44E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS11765 73298b58b25d201e81473ff7f975bf66 493 TIGRFAM TIGR03708 poly_P_AMP_trns: polyphosphate:AMP phosphotransferase 2 492 1.8E-230 T 22-04-2016 IPR022489 Polyphosphate:AMP phosphotransferase GO:0006797|GO:0043751 SCD_RS11765 73298b58b25d201e81473ff7f975bf66 493 SUPERFAMILY SSF52540 302 482 5.11E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11765 73298b58b25d201e81473ff7f975bf66 493 Gene3D G3DSA:3.40.50.300 255 491 2.5E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11765 73298b58b25d201e81473ff7f975bf66 493 Gene3D G3DSA:3.40.50.300 1 240 4.2E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11765 73298b58b25d201e81473ff7f975bf66 493 PANTHER PTHR34383 4 489 3.6E-251 T 22-04-2016 SCD_RS11765 73298b58b25d201e81473ff7f975bf66 493 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 11 234 3.8E-51 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related SCD_RS11765 73298b58b25d201e81473ff7f975bf66 493 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 269 490 1.0E-85 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related SCD_RS11765 73298b58b25d201e81473ff7f975bf66 493 PANTHER PTHR34383:SF3 4 489 3.6E-251 T 22-04-2016 SCD_RS11765 73298b58b25d201e81473ff7f975bf66 493 SUPERFAMILY SSF52540 43 235 4.31E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12695 c07430cce906e2a4a67ce10a33768f2a 180 SUPERFAMILY SSF56784 1 175 1.02E-44 T 22-04-2016 IPR023214 HAD-like domain SCD_RS12695 c07430cce906e2a4a67ce10a33768f2a 180 PANTHER PTHR23133 2 175 3.2E-68 T 22-04-2016 SCD_RS12695 c07430cce906e2a4a67ce10a33768f2a 180 PANTHER PTHR23133:SF7 2 175 3.2E-68 T 22-04-2016 SCD_RS12695 c07430cce906e2a4a67ce10a33768f2a 180 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 3 143 1.1E-41 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 SCD_RS12695 c07430cce906e2a4a67ce10a33768f2a 180 PIRSF PIRSF004682 1 178 5.3E-53 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 SCD_RS12695 c07430cce906e2a4a67ce10a33768f2a 180 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 2 145 4.8E-33 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA SCD_RS12695 c07430cce906e2a4a67ce10a33768f2a 180 Gene3D G3DSA:3.40.50.1000 1 174 3.9E-55 T 22-04-2016 IPR023214 HAD-like domain SCD_RS12695 c07430cce906e2a4a67ce10a33768f2a 180 Pfam PF13242 HAD-hyrolase-like 99 171 1.8E-9 T 22-04-2016 SCD_RS15500 48a5f7e0ac76e6402084c7b416240cb3 672 Pfam PF12729 Four helix bundle sensory module for signal transduction 19 187 2.0E-9 T 22-04-2016 IPR024478 4HB MCP domain SCD_RS15500 48a5f7e0ac76e6402084c7b416240cb3 672 Pfam PF00990 Diguanylate cyclase, GGDEF domain 515 668 3.6E-46 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15500 48a5f7e0ac76e6402084c7b416240cb3 672 SUPERFAMILY SSF55785 253 352 1.26E-28 T 22-04-2016 IPR000014 PAS domain SCD_RS15500 48a5f7e0ac76e6402084c7b416240cb3 672 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 511 671 4.8E-45 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15500 48a5f7e0ac76e6402084c7b416240cb3 672 Gene3D G3DSA:3.30.70.270 517 671 6.1E-52 T 22-04-2016 SCD_RS15500 48a5f7e0ac76e6402084c7b416240cb3 672 SMART SM00267 504 672 1.8E-64 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15500 48a5f7e0ac76e6402084c7b416240cb3 672 PANTHER PTHR24423 10 514 4.5E-28 T 22-04-2016 SCD_RS15500 48a5f7e0ac76e6402084c7b416240cb3 672 Gene3D G3DSA:3.30.450.20 380 502 6.7E-23 T 22-04-2016 SCD_RS15500 48a5f7e0ac76e6402084c7b416240cb3 672 Pfam PF13426 PAS domain 255 354 4.1E-13 T 22-04-2016 IPR000014 PAS domain SCD_RS15500 48a5f7e0ac76e6402084c7b416240cb3 672 Gene3D G3DSA:3.30.450.20 254 354 3.6E-25 T 22-04-2016 SCD_RS15500 48a5f7e0ac76e6402084c7b416240cb3 672 PANTHER PTHR24423:SF442 10 514 4.5E-28 T 22-04-2016 SCD_RS15500 48a5f7e0ac76e6402084c7b416240cb3 672 SMART SM00091 242 311 0.027 T 22-04-2016 IPR000014 PAS domain SCD_RS15500 48a5f7e0ac76e6402084c7b416240cb3 672 SMART SM00091 386 452 1.4E-11 T 22-04-2016 IPR000014 PAS domain SCD_RS15500 48a5f7e0ac76e6402084c7b416240cb3 672 SMART SM00086 314 356 0.0038 T 22-04-2016 IPR001610 PAC motif SCD_RS15500 48a5f7e0ac76e6402084c7b416240cb3 672 SMART SM00086 464 504 2.0 T 22-04-2016 IPR001610 PAC motif SCD_RS15500 48a5f7e0ac76e6402084c7b416240cb3 672 Pfam PF00989 PAS fold 391 500 6.2E-15 T 22-04-2016 IPR013767 PAS fold GO:0006355 SCD_RS15500 48a5f7e0ac76e6402084c7b416240cb3 672 SUPERFAMILY SSF55785 397 512 5.53E-24 T 22-04-2016 IPR000014 PAS domain SCD_RS15500 48a5f7e0ac76e6402084c7b416240cb3 672 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 382 511 2.2E-26 T 22-04-2016 IPR000014 PAS domain SCD_RS15500 48a5f7e0ac76e6402084c7b416240cb3 672 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 253 361 1.8E-14 T 22-04-2016 IPR000014 PAS domain SCD_RS15500 48a5f7e0ac76e6402084c7b416240cb3 672 SUPERFAMILY SSF55073 520 670 1.1E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS07600 64696e470e538a70f4daba99d2a1e470 320 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 320 74.257 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SCD_RS07600 64696e470e538a70f4daba99d2a1e470 320 SUPERFAMILY SSF53901 3 320 1.61E-73 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SCD_RS07600 64696e470e538a70f4daba99d2a1e470 320 PANTHER PTHR18919 27 320 3.7E-137 T 22-04-2016 SCD_RS07600 64696e470e538a70f4daba99d2a1e470 320 Gene3D G3DSA:3.40.47.10 2 162 2.9E-71 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SCD_RS07600 64696e470e538a70f4daba99d2a1e470 320 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 108 185 6.9E-36 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SCD_RS07600 64696e470e538a70f4daba99d2a1e470 320 PANTHER PTHR18919:SF109 27 320 3.7E-137 T 22-04-2016 SCD_RS07600 64696e470e538a70f4daba99d2a1e470 320 Gene3D G3DSA:3.40.47.10 163 320 1.6E-54 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SCD_RS07600 64696e470e538a70f4daba99d2a1e470 320 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 2 320 3.2E-137 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SCD_RS07600 64696e470e538a70f4daba99d2a1e470 320 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 231 320 1.9E-37 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SCD_RS00890 8040438e62d4cf90dd1d7e4b38613d99 378 PANTHER PTHR30294 3 375 7.6E-109 T 22-04-2016 SCD_RS00890 8040438e62d4cf90dd1d7e4b38613d99 378 PANTHER PTHR30294:SF12 3 375 7.6E-109 T 22-04-2016 SCD_RS00890 8040438e62d4cf90dd1d7e4b38613d99 378 Pfam PF12698 ABC-2 family transporter protein 27 370 1.5E-53 T 22-04-2016 SCD_RS00025 0e0441bc4247a0c90336b8584c6fc204 186 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 2.4E-19 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 SCD_RS00025 0e0441bc4247a0c90336b8584c6fc204 186 Hamap MF_00141 Elongation factor P [efp]. 1 184 46.969 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 SCD_RS00025 0e0441bc4247a0c90336b8584c6fc204 186 SMART SM01185 67 120 2.5E-19 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 SCD_RS00025 0e0441bc4247a0c90336b8584c6fc204 186 PANTHER PTHR30053 1 185 2.2E-68 T 22-04-2016 SCD_RS00025 0e0441bc4247a0c90336b8584c6fc204 186 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 120 3.9E-17 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 SCD_RS00025 0e0441bc4247a0c90336b8584c6fc204 186 SMART SM00841 128 183 3.0E-25 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 SCD_RS00025 0e0441bc4247a0c90336b8584c6fc204 186 TIGRFAM TIGR00038 efp: translation elongation factor P 3 184 1.8E-62 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 SCD_RS00025 0e0441bc4247a0c90336b8584c6fc204 186 SUPERFAMILY SSF50249 65 126 3.26E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS00025 0e0441bc4247a0c90336b8584c6fc204 186 SUPERFAMILY SSF50104 1 63 1.0E-16 T 22-04-2016 IPR008991 Translation protein SH3-like domain SCD_RS00025 0e0441bc4247a0c90336b8584c6fc204 186 PIRSF PIRSF005901 1 185 2.1E-55 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 SCD_RS00025 0e0441bc4247a0c90336b8584c6fc204 186 Pfam PF09285 Elongation factor P, C-terminal 128 183 2.3E-20 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 SCD_RS00025 0e0441bc4247a0c90336b8584c6fc204 186 Gene3D G3DSA:2.40.50.140 127 184 3.5E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS00025 0e0441bc4247a0c90336b8584c6fc204 186 Gene3D G3DSA:2.30.30.30 1 62 3.9E-20 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 SCD_RS00025 0e0441bc4247a0c90336b8584c6fc204 186 Gene3D G3DSA:2.40.50.140 65 126 1.7E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS00025 0e0441bc4247a0c90336b8584c6fc204 186 SUPERFAMILY SSF50249 127 184 1.3E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS12995 1a5fb1206669f5791351ba667a9e6c8f 247 PANTHER PTHR30294:SF5 2 236 1.2E-18 T 22-04-2016 SCD_RS12995 1a5fb1206669f5791351ba667a9e6c8f 247 PANTHER PTHR30294 2 236 1.2E-18 T 22-04-2016 SCD_RS12995 1a5fb1206669f5791351ba667a9e6c8f 247 Pfam PF12679 ABC-2 family transporter protein 4 239 7.1E-12 T 22-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 SCD_RS02275 787309a8a3ca161a227ccb485f980886 144 Gene3D G3DSA:1.10.760.10 27 128 3.6E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS02275 787309a8a3ca161a227ccb485f980886 144 SUPERFAMILY SSF46626 45 140 2.47E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS02275 787309a8a3ca161a227ccb485f980886 144 Pfam PF00034 Cytochrome c 49 129 3.2E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS05935 22f5a954ec6554b2c92b04eeb0a02a78 153 SMART SM00116 101 148 0.23 T 22-04-2016 IPR000644 CBS domain SCD_RS05935 22f5a954ec6554b2c92b04eeb0a02a78 153 SMART SM00116 11 59 0.053 T 22-04-2016 IPR000644 CBS domain SCD_RS05935 22f5a954ec6554b2c92b04eeb0a02a78 153 Pfam PF00571 CBS domain 94 148 5.4E-8 T 22-04-2016 IPR000644 CBS domain SCD_RS05935 22f5a954ec6554b2c92b04eeb0a02a78 153 Pfam PF00571 CBS domain 14 58 6.5E-7 T 22-04-2016 IPR000644 CBS domain SCD_RS05935 22f5a954ec6554b2c92b04eeb0a02a78 153 Gene3D G3DSA:3.10.580.10 3 148 1.7E-18 T 22-04-2016 SCD_RS05935 22f5a954ec6554b2c92b04eeb0a02a78 153 SUPERFAMILY SSF54631 4 149 2.39E-20 T 22-04-2016 SCD_RS14905 95193821b9d6032300ba36a5b24bb35c 511 SUPERFAMILY SSF47323 389 511 3.34E-34 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS14905 95193821b9d6032300ba36a5b24bb35c 511 PRINTS PR01038 Arginyl-tRNA synthetase signature 92 105 6.3E-22 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SCD_RS14905 95193821b9d6032300ba36a5b24bb35c 511 PRINTS PR01038 Arginyl-tRNA synthetase signature 263 284 6.3E-22 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SCD_RS14905 95193821b9d6032300ba36a5b24bb35c 511 PRINTS PR01038 Arginyl-tRNA synthetase signature 53 68 6.3E-22 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SCD_RS14905 95193821b9d6032300ba36a5b24bb35c 511 PRINTS PR01038 Arginyl-tRNA synthetase signature 68 84 6.3E-22 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SCD_RS14905 95193821b9d6032300ba36a5b24bb35c 511 Pfam PF00750 tRNA synthetases class I (R) 36 361 4.9E-24 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SCD_RS14905 95193821b9d6032300ba36a5b24bb35c 511 Gene3D G3DSA:3.30.1360.70 9 42 2.4E-6 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SCD_RS14905 95193821b9d6032300ba36a5b24bb35c 511 Gene3D G3DSA:1.10.730.10 399 511 2.1E-39 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS14905 95193821b9d6032300ba36a5b24bb35c 511 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 10 511 2.1E-116 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SCD_RS14905 95193821b9d6032300ba36a5b24bb35c 511 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 63 72 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SCD_RS14905 95193821b9d6032300ba36a5b24bb35c 511 Gene3D G3DSA:3.40.50.620 47 398 2.6E-104 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS14905 95193821b9d6032300ba36a5b24bb35c 511 SUPERFAMILY SSF52374 47 406 7.88E-89 T 22-04-2016 SCD_RS14905 95193821b9d6032300ba36a5b24bb35c 511 PANTHER PTHR11956 167 511 2.5E-180 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SCD_RS14905 95193821b9d6032300ba36a5b24bb35c 511 Pfam PF05746 DALR anticodon binding domain 394 511 1.3E-30 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SCD_RS14905 95193821b9d6032300ba36a5b24bb35c 511 PANTHER PTHR11956 10 146 2.5E-180 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SCD_RS14905 95193821b9d6032300ba36a5b24bb35c 511 PANTHER PTHR11956:SF6 167 511 2.5E-180 T 22-04-2016 SCD_RS14905 95193821b9d6032300ba36a5b24bb35c 511 PANTHER PTHR11956:SF6 10 146 2.5E-180 T 22-04-2016 SCD_RS14905 95193821b9d6032300ba36a5b24bb35c 511 SMART SM00836 394 511 1.1E-47 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SCD_RS13710 639710c4e66428ee5906631ab9293e2b 661 Gene3D G3DSA:1.10.486.10 382 531 1.7E-36 T 22-04-2016 SCD_RS13710 639710c4e66428ee5906631ab9293e2b 661 SUPERFAMILY SSF52540 2 631 6.77E-157 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13710 639710c4e66428ee5906631ab9293e2b 661 PANTHER PTHR11070:SF19 1 645 8.8E-276 T 22-04-2016 SCD_RS13710 639710c4e66428ee5906631ab9293e2b 661 Gene3D G3DSA:3.40.50.300 181 278 9.2E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13710 639710c4e66428ee5906631ab9293e2b 661 Gene3D G3DSA:3.40.50.300 2 106 9.2E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13710 639710c4e66428ee5906631ab9293e2b 661 Gene3D G3DSA:1.10.10.160 110 180 1.7E-17 T 22-04-2016 IPR013986 DExx box DNA helicase domain SCD_RS13710 639710c4e66428ee5906631ab9293e2b 661 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 3 660 38.732 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 SCD_RS13710 639710c4e66428ee5906631ab9293e2b 661 Pfam PF13361 UvrD-like helicase C-terminal domain 270 607 2.0E-63 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SCD_RS13710 639710c4e66428ee5906631ab9293e2b 661 Gene3D G3DSA:3.40.50.300 279 381 9.5E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13710 639710c4e66428ee5906631ab9293e2b 661 Gene3D G3DSA:3.40.50.300 544 632 9.5E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13710 639710c4e66428ee5906631ab9293e2b 661 Pfam PF00580 UvrD/REP helicase N-terminal domain 5 265 4.7E-68 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SCD_RS13710 639710c4e66428ee5906631ab9293e2b 661 PANTHER PTHR11070 1 645 8.8E-276 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SCD_RS09555 311f425dfc181c1cc1f10de77af89c12 186 Pfam PF08281 Sigma-70, region 4 114 164 3.2E-15 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS09555 311f425dfc181c1cc1f10de77af89c12 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 168 1.8E-24 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS09555 311f425dfc181c1cc1f10de77af89c12 186 Pfam PF04542 Sigma-70 region 2 19 82 1.4E-12 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS09555 311f425dfc181c1cc1f10de77af89c12 186 Gene3D G3DSA:1.10.1740.10 14 106 5.6E-19 T 22-04-2016 SCD_RS09555 311f425dfc181c1cc1f10de77af89c12 186 Gene3D G3DSA:1.10.10.10 113 170 4.4E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS09555 311f425dfc181c1cc1f10de77af89c12 186 SUPERFAMILY SSF88659 106 169 2.99E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS09555 311f425dfc181c1cc1f10de77af89c12 186 SUPERFAMILY SSF88946 13 94 3.61E-16 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS09555 311f425dfc181c1cc1f10de77af89c12 186 PANTHER PTHR30173 23 173 1.5E-33 T 22-04-2016 SCD_RS08730 9cc2b43e02cb7d2f5891dde8b2978a7c 176 SUPERFAMILY SSF54001 43 164 2.18E-41 T 22-04-2016 SCD_RS08730 9cc2b43e02cb7d2f5891dde8b2978a7c 176 Gene3D G3DSA:3.90.1720.10 41 165 8.7E-44 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SCD_RS08730 9cc2b43e02cb7d2f5891dde8b2978a7c 176 Pfam PF00877 NlpC/P60 family 55 162 2.4E-29 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SCD_RS08730 9cc2b43e02cb7d2f5891dde8b2978a7c 176 PANTHER PTHR21666 47 164 2.4E-34 T 22-04-2016 SCD_RS04910 7413792290e1f33f5f2e5c910d27f7c3 183 Gene3D G3DSA:1.10.3210.10 5 172 2.0E-46 T 22-04-2016 IPR006674 HD domain SCD_RS04910 7413792290e1f33f5f2e5c910d27f7c3 183 SUPERFAMILY SSF109604 5 172 8.79E-38 T 22-04-2016 SCD_RS01015 e67fffe707861215a86e0f6413a14049 183 PANTHER PTHR13061:SF11 8 182 2.0E-67 T 22-04-2016 SCD_RS01015 e67fffe707861215a86e0f6413a14049 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 20 51 4.3E-4 T 22-04-2016 IPR001451 Hexapeptide repeat SCD_RS01015 e67fffe707861215a86e0f6413a14049 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 86 115 2.2E-5 T 22-04-2016 IPR001451 Hexapeptide repeat SCD_RS01015 e67fffe707861215a86e0f6413a14049 183 SUPERFAMILY SSF51161 12 181 2.63E-41 T 22-04-2016 IPR011004 Trimeric LpxA-like SCD_RS01015 e67fffe707861215a86e0f6413a14049 183 PANTHER PTHR13061 8 182 2.0E-67 T 22-04-2016 SCD_RS01015 e67fffe707861215a86e0f6413a14049 183 Gene3D G3DSA:2.160.10.10 9 181 1.2E-41 T 22-04-2016 SCD_RS12135 c75fc242e83cd11bd3b73673b69676a4 244 Pfam PF01925 Sulfite exporter TauE/SafE 10 237 1.4E-26 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SCD_RS12135 c75fc242e83cd11bd3b73673b69676a4 244 PANTHER PTHR30269:SF14 4 243 4.6E-22 T 22-04-2016 SCD_RS12135 c75fc242e83cd11bd3b73673b69676a4 244 PANTHER PTHR30269 4 243 4.6E-22 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SCD_RS01315 eedafb8861e4bd76f1e25123628a267a 280 PANTHER PTHR32039 1 279 8.0E-131 T 22-04-2016 SCD_RS01315 eedafb8861e4bd76f1e25123628a267a 280 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 4.6E-46 T 22-04-2016 SCD_RS01315 eedafb8861e4bd76f1e25123628a267a 280 SUPERFAMILY SSF54211 2 170 3.79E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SCD_RS01315 eedafb8861e4bd76f1e25123628a267a 280 Gene3D G3DSA:3.30.230.10 5 168 1.2E-29 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SCD_RS01315 eedafb8861e4bd76f1e25123628a267a 280 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 280 1.4E-36 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain SCD_RS01315 eedafb8861e4bd76f1e25123628a267a 280 SUPERFAMILY SSF52540 189 279 2.1E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS01315 eedafb8861e4bd76f1e25123628a267a 280 PANTHER PTHR32039:SF7 1 279 8.0E-131 T 22-04-2016 IPR004482 Mg chelatase-related protein SCD_RS01315 eedafb8861e4bd76f1e25123628a267a 280 Gene3D G3DSA:3.40.50.300 189 280 3.1E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS09710 c63e0f4c160661b04d6084c394fa4cb3 282 Gene3D G3DSA:1.10.3150.10 15 277 2.2E-59 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS09710 c63e0f4c160661b04d6084c394fa4cb3 282 PANTHER PTHR33525 10 238 8.1E-36 T 22-04-2016 SCD_RS09710 c63e0f4c160661b04d6084c394fa4cb3 282 SMART SM00471 119 247 1.4E-4 T 22-04-2016 IPR003607 HD/PDEase domain SCD_RS09710 c63e0f4c160661b04d6084c394fa4cb3 282 Pfam PF08668 HDOD domain 27 213 8.8E-42 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS09710 c63e0f4c160661b04d6084c394fa4cb3 282 SUPERFAMILY SSF109604 16 276 2.09E-57 T 22-04-2016 SCD_RS09710 c63e0f4c160661b04d6084c394fa4cb3 282 PANTHER PTHR33525:SF2 10 238 8.1E-36 T 22-04-2016 SCD_RS09710 c63e0f4c160661b04d6084c394fa4cb3 282 TIGRFAM TIGR00277 HDIG: HDIG domain 121 212 7.0E-9 T 22-04-2016 IPR006675 HDIG domain SCD_RS02165 b6cf1c655f4659b9cb159424c1eb2283 820 Gene3D G3DSA:1.10.3150.10 291 570 3.0E-57 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS02165 b6cf1c655f4659b9cb159424c1eb2283 820 SUPERFAMILY SSF55781 660 819 2.4E-9 T 22-04-2016 IPR029016 GAF domain-like SCD_RS02165 b6cf1c655f4659b9cb159424c1eb2283 820 SUPERFAMILY SSF56112 8 299 3.37E-73 T 22-04-2016 IPR011009 Protein kinase-like domain SCD_RS02165 b6cf1c655f4659b9cb159424c1eb2283 820 Gene3D G3DSA:3.30.450.40 660 818 8.3E-8 T 22-04-2016 IPR029016 GAF domain-like SCD_RS02165 b6cf1c655f4659b9cb159424c1eb2283 820 PANTHER PTHR24362 541 595 1.3E-72 T 22-04-2016 SCD_RS02165 b6cf1c655f4659b9cb159424c1eb2283 820 PANTHER PTHR24362 8 315 1.3E-72 T 22-04-2016 SCD_RS02165 b6cf1c655f4659b9cb159424c1eb2283 820 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 131 143 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 SCD_RS02165 b6cf1c655f4659b9cb159424c1eb2283 820 PANTHER PTHR24362:SF160 541 595 1.3E-72 T 22-04-2016 SCD_RS02165 b6cf1c655f4659b9cb159424c1eb2283 820 PANTHER PTHR24362:SF160 8 315 1.3E-72 T 22-04-2016 SCD_RS02165 b6cf1c655f4659b9cb159424c1eb2283 820 SMART SM00220 11 272 4.3E-62 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SCD_RS02165 b6cf1c655f4659b9cb159424c1eb2283 820 Gene3D G3DSA:1.10.510.10 110 274 1.4E-48 T 22-04-2016 SCD_RS02165 b6cf1c655f4659b9cb159424c1eb2283 820 Pfam PF00069 Protein kinase domain 11 261 2.8E-53 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SCD_RS02165 b6cf1c655f4659b9cb159424c1eb2283 820 SUPERFAMILY SSF109604 292 571 7.53E-48 T 22-04-2016 SCD_RS02165 b6cf1c655f4659b9cb159424c1eb2283 820 Gene3D G3DSA:3.30.200.20 3 109 1.4E-25 T 22-04-2016 SCD_RS02165 b6cf1c655f4659b9cb159424c1eb2283 820 Pfam PF08668 HDOD domain 304 496 1.7E-36 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS05245 6c3facc64ce13f2101c872fc60a09773 148 Gene3D G3DSA:3.30.479.10 1 145 1.1E-37 T 22-04-2016 SCD_RS05245 6c3facc64ce13f2101c872fc60a09773 148 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 3 115 7.1E-28 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SCD_RS05245 6c3facc64ce13f2101c872fc60a09773 148 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 145 3.1E-34 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SCD_RS05245 6c3facc64ce13f2101c872fc60a09773 148 SUPERFAMILY SSF55620 1 145 6.67E-38 T 22-04-2016 SCD_RS05245 6c3facc64ce13f2101c872fc60a09773 148 PANTHER PTHR12589 1 142 4.2E-29 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SCD_RS10840 270df7c9af7da7e305483fa13b5b70c4 216 SUPERFAMILY SSF50630 101 203 6.1E-20 T 22-04-2016 IPR021109 Aspartic peptidase domain SCD_RS10840 270df7c9af7da7e305483fa13b5b70c4 216 PANTHER PTHR41535:SF1 5 216 2.6E-22 T 22-04-2016 SCD_RS10840 270df7c9af7da7e305483fa13b5b70c4 216 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 99 212 3.5E-32 T 22-04-2016 IPR011969 Clan AA aspartic peptidase, C-terminal SCD_RS10840 270df7c9af7da7e305483fa13b5b70c4 216 PANTHER PTHR41535 5 216 2.6E-22 T 22-04-2016 SCD_RS10840 270df7c9af7da7e305483fa13b5b70c4 216 Pfam PF13975 gag-polyprotein putative aspartyl protease 111 200 1.5E-25 T 22-04-2016 SCD_RS12185 9415997051bc382a1b1c027c123cb182 571 SUPERFAMILY SSF52540 179 568 2.95E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12185 9415997051bc382a1b1c027c123cb182 571 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 389 403 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SCD_RS12185 9415997051bc382a1b1c027c123cb182 571 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 46 149 5.7E-15 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 SCD_RS12185 9415997051bc382a1b1c027c123cb182 571 Pfam PF00437 Type II/IV secretion system protein 194 461 3.5E-84 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SCD_RS12185 9415997051bc382a1b1c027c123cb182 571 PANTHER PTHR30258:SF1 1 571 5.1E-230 T 22-04-2016 SCD_RS12185 9415997051bc382a1b1c027c123cb182 571 Gene3D G3DSA:3.30.450.90 168 294 2.3E-51 T 22-04-2016 SCD_RS12185 9415997051bc382a1b1c027c123cb182 571 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 13 570 4.4E-253 T 22-04-2016 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 SCD_RS12185 9415997051bc382a1b1c027c123cb182 571 Gene3D G3DSA:3.40.50.300 302 569 2.1E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12185 9415997051bc382a1b1c027c123cb182 571 SUPERFAMILY SSF160246 7 145 2.88E-31 T 22-04-2016 SCD_RS12185 9415997051bc382a1b1c027c123cb182 571 PANTHER PTHR30258 1 571 5.1E-230 T 22-04-2016 SCD_RS10975 4a5d7a5c54c617b06448f4fba83b1ddb 213 Gene3D G3DSA:3.40.50.300 4 184 6.5E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS10975 4a5d7a5c54c617b06448f4fba83b1ddb 213 PANTHER PTHR10513:SF16 8 202 1.5E-41 T 22-04-2016 SCD_RS10975 4a5d7a5c54c617b06448f4fba83b1ddb 213 PANTHER PTHR10513 8 202 1.5E-41 T 22-04-2016 SCD_RS10975 4a5d7a5c54c617b06448f4fba83b1ddb 213 SUPERFAMILY SSF52540 4 208 2.0E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS10975 4a5d7a5c54c617b06448f4fba83b1ddb 213 Pfam PF01712 Deoxynucleoside kinase 10 200 2.8E-39 T 22-04-2016 IPR031314 Deoxynucleoside kinase domain SCD_RS10975 4a5d7a5c54c617b06448f4fba83b1ddb 213 PIRSF PIRSF000705 2 207 2.0E-57 T 22-04-2016 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 SCD_RS09765 317c47ce8583d1d0601d9a85127ea040 224 PANTHER PTHR30586:SF0 1 221 2.3E-89 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 SCD_RS09765 317c47ce8583d1d0601d9a85127ea040 224 PANTHER PTHR30586 1 221 2.3E-89 T 22-04-2016 SCD_RS09765 317c47ce8583d1d0601d9a85127ea040 224 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 211 26.686 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 SCD_RS09765 317c47ce8583d1d0601d9a85127ea040 224 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 208 5.6E-73 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 SCD_RS09765 317c47ce8583d1d0601d9a85127ea040 224 PIRSF PIRSF006102 1 217 8.8E-70 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SCD_RS09765 317c47ce8583d1d0601d9a85127ea040 224 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 200 2.8E-59 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SCD_RS02745 a0edee079051e947ee34ab5bb51a6489 279 PIRSF PIRSF005052 1 279 3.3E-108 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 SCD_RS02745 a0edee079051e947ee34ab5bb51a6489 279 PANTHER PTHR30448 1 278 5.1E-118 T 22-04-2016 SCD_RS02745 a0edee079051e947ee34ab5bb51a6489 279 PANTHER PTHR30448:SF0 1 278 5.1E-118 T 22-04-2016 SCD_RS02745 a0edee079051e947ee34ab5bb51a6489 279 Pfam PF03668 P-loop ATPase protein family 1 278 2.1E-96 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 SCD_RS02745 a0edee079051e947ee34ab5bb51a6489 279 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 279 38.685 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 SCD_RS02745 a0edee079051e947ee34ab5bb51a6489 279 Gene3D G3DSA:3.40.50.300 1 152 5.5E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02745 a0edee079051e947ee34ab5bb51a6489 279 SUPERFAMILY SSF52540 1 152 1.95E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07315 5745c254478106b0051197dd674e3636 214 PANTHER PTHR22939 35 205 4.6E-40 T 22-04-2016 SCD_RS07315 5745c254478106b0051197dd674e3636 214 PANTHER PTHR22939:SF104 35 205 4.6E-40 T 22-04-2016 SCD_RS01155 5bb3742bffaa0bc53adb79de7b4449a5 299 SUPERFAMILY SSF52540 46 284 4.44E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS01155 5bb3742bffaa0bc53adb79de7b4449a5 299 Gene3D G3DSA:3.40.50.300 63 177 2.4E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS01155 5bb3742bffaa0bc53adb79de7b4449a5 299 Pfam PF05621 Bacterial TniB protein 25 277 1.8E-84 T 22-04-2016 IPR008868 Bacterial TniB SCD_RS08075 539ab63d6240ade8cca38345e6a9a416 251 SUPERFAMILY SSF64005 14 237 2.49E-86 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SCD_RS08075 539ab63d6240ade8cca38345e6a9a416 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 17 242 40.67 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SCD_RS08075 539ab63d6240ade8cca38345e6a9a416 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 17 241 1.5E-89 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SCD_RS08075 539ab63d6240ade8cca38345e6a9a416 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 187 204 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 SCD_RS08075 539ab63d6240ade8cca38345e6a9a416 251 Gene3D G3DSA:3.40.1180.10 8 248 2.7E-95 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SCD_RS08075 539ab63d6240ade8cca38345e6a9a416 251 PANTHER PTHR10291 10 251 1.1E-113 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SCD_RS08075 539ab63d6240ade8cca38345e6a9a416 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 24 241 1.0E-81 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SCD_RS13840 d4e2998176321e9d4dd7de6ecbadabf7 260 PANTHER PTHR38042 3 260 4.2E-56 T 22-04-2016 SCD_RS13840 d4e2998176321e9d4dd7de6ecbadabf7 260 Pfam PF02602 Uroporphyrinogen-III synthase HemD 21 238 6.2E-42 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS13840 d4e2998176321e9d4dd7de6ecbadabf7 260 Gene3D G3DSA:3.40.50.10090 128 253 4.8E-17 T 22-04-2016 SCD_RS13840 d4e2998176321e9d4dd7de6ecbadabf7 260 Gene3D G3DSA:3.40.50.10090 2 122 1.2E-15 T 22-04-2016 SCD_RS13840 d4e2998176321e9d4dd7de6ecbadabf7 260 PANTHER PTHR38042:SF1 3 260 4.2E-56 T 22-04-2016 SCD_RS13840 d4e2998176321e9d4dd7de6ecbadabf7 260 SUPERFAMILY SSF69618 9 252 5.49E-53 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SCD_RS00880 5c632b3dc3e7a95e809f21ce5950984b 320 PANTHER PTHR32347 20 320 4.4E-73 T 22-04-2016 SCD_RS00880 5c632b3dc3e7a95e809f21ce5950984b 320 PANTHER PTHR32347:SF15 20 320 4.4E-73 T 22-04-2016 SCD_RS00880 5c632b3dc3e7a95e809f21ce5950984b 320 Gene3D G3DSA:2.40.50.100 40 72 8.9E-10 T 22-04-2016 SCD_RS00880 5c632b3dc3e7a95e809f21ce5950984b 320 Gene3D G3DSA:2.40.50.100 199 232 8.9E-10 T 22-04-2016 SCD_RS00880 5c632b3dc3e7a95e809f21ce5950984b 320 Pfam PF13437 HlyD family secretion protein 202 313 6.9E-20 T 22-04-2016 SCD_RS00880 5c632b3dc3e7a95e809f21ce5950984b 320 SUPERFAMILY SSF111369 178 254 2.75E-10 T 22-04-2016 SCD_RS00880 5c632b3dc3e7a95e809f21ce5950984b 320 SUPERFAMILY SSF111369 108 144 2.75E-10 T 22-04-2016 SCD_RS09480 f8246a62a1d0c011d3c4c98dd28969d9 372 PANTHER PTHR30097:SF3 22 365 7.5E-51 T 22-04-2016 SCD_RS09480 f8246a62a1d0c011d3c4c98dd28969d9 372 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 288 2.8E-34 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SCD_RS09480 f8246a62a1d0c011d3c4c98dd28969d9 372 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 73 361 3.1E-33 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SCD_RS09480 f8246a62a1d0c011d3c4c98dd28969d9 372 Gene3D G3DSA:2.40.50.100 68 101 3.7E-12 T 22-04-2016 SCD_RS09480 f8246a62a1d0c011d3c4c98dd28969d9 372 Gene3D G3DSA:2.40.50.100 182 218 3.7E-12 T 22-04-2016 SCD_RS09480 f8246a62a1d0c011d3c4c98dd28969d9 372 SUPERFAMILY SSF111369 73 293 1.44E-15 T 22-04-2016 SCD_RS09480 f8246a62a1d0c011d3c4c98dd28969d9 372 PANTHER PTHR30097 22 365 7.5E-51 T 22-04-2016 SCD_RS01065 46787b9fb922f020e70c14a8333fdf0d 186 PANTHER PTHR35602 1 186 3.6E-73 T 22-04-2016 SCD_RS01065 46787b9fb922f020e70c14a8333fdf0d 186 SUPERFAMILY SSF53474 1 183 4.16E-20 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SCD_RS01065 46787b9fb922f020e70c14a8333fdf0d 186 Gene3D G3DSA:3.40.50.1820 1 181 2.0E-20 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SCD_RS01065 46787b9fb922f020e70c14a8333fdf0d 186 Pfam PF05728 Uncharacterised protein family (UPF0227) 2 184 1.4E-56 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA SCD_RS01065 46787b9fb922f020e70c14a8333fdf0d 186 PANTHER PTHR35602:SF3 1 186 3.6E-73 T 22-04-2016 SCD_RS14180 936a7730927df878bb7d71e823a724d4 385 Gene3D G3DSA:3.40.50.2000 195 336 6.7E-16 T 22-04-2016 SCD_RS14180 936a7730927df878bb7d71e823a724d4 385 Pfam PF00534 Glycosyl transferases group 1 194 328 5.2E-18 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SCD_RS14180 936a7730927df878bb7d71e823a724d4 385 PANTHER PTHR12526 13 377 8.2E-21 T 22-04-2016 SCD_RS14180 936a7730927df878bb7d71e823a724d4 385 SUPERFAMILY SSF53756 11 371 3.95E-34 T 22-04-2016 SCD_RS03955 54b4a13039c519b5bff14573652ca532 476 Gene3D G3DSA:3.30.2010.10 59 140 5.4E-19 T 22-04-2016 SCD_RS03955 54b4a13039c519b5bff14573652ca532 476 SUPERFAMILY SSF48452 260 448 4.88E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS03955 54b4a13039c519b5bff14573652ca532 476 Gene3D G3DSA:1.25.40.10 260 445 1.4E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS03955 54b4a13039c519b5bff14573652ca532 476 PANTHER PTHR22726 6 341 1.4E-83 T 22-04-2016 SCD_RS03955 54b4a13039c519b5bff14573652ca532 476 Pfam PF01435 Peptidase family M48 66 250 2.6E-33 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SCD_RS03955 54b4a13039c519b5bff14573652ca532 476 PANTHER PTHR22726:SF10 6 341 1.4E-83 T 22-04-2016 SCD_RS03955 54b4a13039c519b5bff14573652ca532 476 Pfam PF14559 Tetratricopeptide repeat 347 409 1.6E-8 T 22-04-2016 SCD_RS03955 54b4a13039c519b5bff14573652ca532 476 Pfam PF14559 Tetratricopeptide repeat 275 329 4.0E-6 T 22-04-2016 SCD_RS03955 54b4a13039c519b5bff14573652ca532 476 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 1 473 31.548 T 22-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 SCD_RS13780 49c2fb79d286a9284b969c5997aebe00 452 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SCD_RS13780 49c2fb79d286a9284b969c5997aebe00 452 Gene3D G3DSA:3.30.1490.20 130 203 6.6E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SCD_RS13780 49c2fb79d286a9284b969c5997aebe00 452 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 6.6E-230 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 SCD_RS13780 49c2fb79d286a9284b969c5997aebe00 452 SUPERFAMILY SSF56059 83 347 3.36E-72 T 22-04-2016 SCD_RS13780 49c2fb79d286a9284b969c5997aebe00 452 SUPERFAMILY SSF51246 331 444 9.94E-44 T 22-04-2016 IPR011054 Rudiment single hybrid motif SCD_RS13780 49c2fb79d286a9284b969c5997aebe00 452 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SCD_RS13780 49c2fb79d286a9284b969c5997aebe00 452 Gene3D G3DSA:3.40.50.20 1 129 3.5E-52 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SCD_RS13780 49c2fb79d286a9284b969c5997aebe00 452 SUPERFAMILY SSF52440 1 113 6.04E-48 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SCD_RS13780 49c2fb79d286a9284b969c5997aebe00 452 PANTHER PTHR18866 1 441 5.7E-298 T 22-04-2016 SCD_RS13780 49c2fb79d286a9284b969c5997aebe00 452 SMART SM00878 336 441 4.3E-67 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal SCD_RS13780 49c2fb79d286a9284b969c5997aebe00 452 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.1E-39 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal SCD_RS13780 49c2fb79d286a9284b969c5997aebe00 452 Gene3D G3DSA:3.30.470.20 204 444 1.4E-100 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SCD_RS13780 49c2fb79d286a9284b969c5997aebe00 452 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 3.5E-83 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SCD_RS13780 49c2fb79d286a9284b969c5997aebe00 452 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 4.3E-45 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain SCD_RS01840 7e9964b440e391a08c8877589b2739ca 391 Gene3D G3DSA:2.140.10.20 121 382 5.9E-43 T 22-04-2016 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain SCD_RS01840 7e9964b440e391a08c8877589b2739ca 391 SUPERFAMILY SSF51004 28 388 9.02E-74 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain SCD_RS01840 7e9964b440e391a08c8877589b2739ca 391 Pfam PF02239 Cytochrome D1 heme domain 26 384 9.7E-110 T 22-04-2016 SCD_RS12580 9887893f031ba406bcaf5ccc3b6a975a 350 Pfam PF12801 4Fe-4S binding domain 153 180 96.0 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS12580 9887893f031ba406bcaf5ccc3b6a975a 350 Pfam PF12801 4Fe-4S binding domain 87 130 2.6E-13 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS12580 9887893f031ba406bcaf5ccc3b6a975a 350 Pfam PF12801 4Fe-4S binding domain 215 248 0.14 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS12580 9887893f031ba406bcaf5ccc3b6a975a 350 Pfam PF13187 4Fe-4S dicluster domain 257 301 2.1E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS12580 9887893f031ba406bcaf5ccc3b6a975a 350 SUPERFAMILY SSF54862 97 118 5.98E-17 T 22-04-2016 SCD_RS12580 9887893f031ba406bcaf5ccc3b6a975a 350 SUPERFAMILY SSF54862 174 301 5.98E-17 T 22-04-2016 SCD_RS12580 9887893f031ba406bcaf5ccc3b6a975a 350 PANTHER PTHR30176 85 329 2.6E-19 T 22-04-2016 SCD_RS12580 9887893f031ba406bcaf5ccc3b6a975a 350 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 288 299 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS12580 9887893f031ba406bcaf5ccc3b6a975a 350 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 258 269 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS12580 9887893f031ba406bcaf5ccc3b6a975a 350 Gene3D G3DSA:3.30.70.20 229 307 1.3E-12 T 22-04-2016 SCD_RS00100 0e5d881067c0fc094e40a4dcf200e919 175 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 171 3.5E-68 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 SCD_RS00100 0e5d881067c0fc094e40a4dcf200e919 175 Pfam PF00156 Phosphoribosyl transferase domain 45 152 7.2E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SCD_RS00100 0e5d881067c0fc094e40a4dcf200e919 175 PANTHER PTHR32315 3 175 4.1E-79 T 22-04-2016 SCD_RS00100 0e5d881067c0fc094e40a4dcf200e919 175 SUPERFAMILY SSF53271 4 172 3.77E-53 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SCD_RS00100 0e5d881067c0fc094e40a4dcf200e919 175 Gene3D G3DSA:3.40.50.2020 3 173 3.0E-69 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SCD_RS00100 0e5d881067c0fc094e40a4dcf200e919 175 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 172 37.051 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 SCD_RS06895 3fcc1cf7b2e455c19129234c0e32bdb6 324 SUPERFAMILY SSF89392 76 200 4.32E-5 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX SCD_RS06895 3fcc1cf7b2e455c19129234c0e32bdb6 324 PANTHER PTHR38782:SF1 4 321 1.2E-53 T 22-04-2016 SCD_RS06895 3fcc1cf7b2e455c19129234c0e32bdb6 324 PIRSF PIRSF005427 1 324 3.1E-102 T 22-04-2016 IPR005588 MucB/RseB SCD_RS06895 3fcc1cf7b2e455c19129234c0e32bdb6 324 Pfam PF03888 MucB/RseB N-terminal domain 28 205 4.7E-62 T 22-04-2016 IPR033434 MucB/RseB, N-terminal SCD_RS06895 3fcc1cf7b2e455c19129234c0e32bdb6 324 Pfam PF17188 MucB/RseB C-terminal domain 225 321 3.7E-29 T 22-04-2016 IPR033436 MucB/RseB, C-terminal SCD_RS06895 3fcc1cf7b2e455c19129234c0e32bdb6 324 PANTHER PTHR38782 4 321 1.2E-53 T 22-04-2016 SCD_RS06895 3fcc1cf7b2e455c19129234c0e32bdb6 324 Gene3D G3DSA:2.50.20.10 124 193 1.4E-5 T 22-04-2016 SCD_RS02895 5ae77f6d264e80758357429a85c598a7 107 Gene3D G3DSA:3.40.30.10 9 104 6.6E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS02895 5ae77f6d264e80758357429a85c598a7 107 SUPERFAMILY SSF52833 5 105 1.66E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS02895 5ae77f6d264e80758357429a85c598a7 107 PIRSF PIRSF005894 1 107 4.3E-44 T 22-04-2016 IPR014434 Monothiol glutaredoxin SCD_RS02895 5ae77f6d264e80758357429a85c598a7 107 Pfam PF00462 Glutaredoxin 18 83 1.9E-15 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 SCD_RS02895 5ae77f6d264e80758357429a85c598a7 107 PANTHER PTHR10293 9 105 2.3E-48 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related SCD_RS02895 5ae77f6d264e80758357429a85c598a7 107 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 7 103 1.3E-42 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related SCD_RS05355 4073aaca7bfd92f667e404ad97906e33 512 PANTHER PTHR23293:SF6 31 241 3.2E-24 T 22-04-2016 SCD_RS05355 4073aaca7bfd92f667e404ad97906e33 512 PANTHER PTHR23293:SF6 259 269 3.2E-24 T 22-04-2016 SCD_RS05355 4073aaca7bfd92f667e404ad97906e33 512 Gene3D G3DSA:3.40.50.620 27 228 2.4E-22 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS05355 4073aaca7bfd92f667e404ad97906e33 512 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 43 269 8.8E-10 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 SCD_RS05355 4073aaca7bfd92f667e404ad97906e33 512 SUPERFAMILY SSF52402 25 228 2.79E-21 T 22-04-2016 SCD_RS05355 4073aaca7bfd92f667e404ad97906e33 512 PANTHER PTHR23293 31 241 3.2E-24 T 22-04-2016 SCD_RS05355 4073aaca7bfd92f667e404ad97906e33 512 PANTHER PTHR23293 259 269 3.2E-24 T 22-04-2016 SCD_RS05355 4073aaca7bfd92f667e404ad97906e33 512 TIGRFAM TIGR03183 DNA_S_dndC: putative sulfurtransferase DndC 28 469 3.5E-177 T 22-04-2016 IPR017598 Sulphur transferase DndC, putative SCD_RS12645 55b24a1fb4caad968a2556a39af10464 229 Pfam PF00483 Nucleotidyl transferase 2 121 4.9E-20 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SCD_RS12645 55b24a1fb4caad968a2556a39af10464 229 Gene3D G3DSA:3.90.550.10 1 221 9.0E-54 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS12645 55b24a1fb4caad968a2556a39af10464 229 SUPERFAMILY SSF53448 1 218 2.48E-54 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS12645 55b24a1fb4caad968a2556a39af10464 229 PANTHER PTHR22572:SF15 2 229 1.2E-43 T 22-04-2016 SCD_RS12645 55b24a1fb4caad968a2556a39af10464 229 PANTHER PTHR22572 2 229 1.2E-43 T 22-04-2016 SCD_RS13995 3e659bc81b91a21162fcd15281af7176 510 Gene3D G3DSA:2.40.160.50 128 510 2.5E-55 T 22-04-2016 SCD_RS13995 3e659bc81b91a21162fcd15281af7176 510 Pfam PF08479 POTRA domain, ShlB-type 18 93 6.1E-17 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type SCD_RS13995 3e659bc81b91a21162fcd15281af7176 510 Pfam PF01103 Surface antigen 372 505 2.1E-5 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 SCD_RS13995 3e659bc81b91a21162fcd15281af7176 510 PANTHER PTHR34597 13 510 4.8E-81 T 22-04-2016 SCD_RS13995 3e659bc81b91a21162fcd15281af7176 510 PANTHER PTHR34597:SF1 13 510 4.8E-81 T 22-04-2016 SCD_RS13995 3e659bc81b91a21162fcd15281af7176 510 Gene3D G3DSA:3.10.20.310 13 93 1.8E-13 T 22-04-2016 SCD_RS08155 56efcd242a11b1b86fddf2dc51434bfa 148 TIGRFAM TIGR00208 fliS: flagellar protein FliS 2 120 6.3E-29 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SCD_RS08155 56efcd242a11b1b86fddf2dc51434bfa 148 SUPERFAMILY SSF101116 3 122 9.42E-35 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SCD_RS08155 56efcd242a11b1b86fddf2dc51434bfa 148 Gene3D G3DSA:1.20.120.340 1 122 5.0E-37 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SCD_RS08155 56efcd242a11b1b86fddf2dc51434bfa 148 Pfam PF02561 Flagellar protein FliS 2 119 1.6E-34 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SCD_RS08155 56efcd242a11b1b86fddf2dc51434bfa 148 PIRSF PIRSF039090 1 127 1.6E-37 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SCD_RS08155 56efcd242a11b1b86fddf2dc51434bfa 148 PANTHER PTHR34773 1 140 1.2E-32 T 22-04-2016 SCD_RS08955 8d6c6d6bebdfe70969969fcee04a4279 363 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 8 350 7.6E-131 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SCD_RS08955 8d6c6d6bebdfe70969969fcee04a4279 363 PIRSF PIRSF004640 1 362 1.7E-148 T 22-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SCD_RS08955 8d6c6d6bebdfe70969969fcee04a4279 363 SUPERFAMILY SSF51395 20 121 5.49E-9 T 22-04-2016 SCD_RS08955 8d6c6d6bebdfe70969969fcee04a4279 363 SUPERFAMILY SSF56014 265 351 2.18E-12 T 22-04-2016 SCD_RS08955 8d6c6d6bebdfe70969969fcee04a4279 363 Pfam PF04551 GcpE protein 12 351 7.7E-136 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SCD_RS08955 8d6c6d6bebdfe70969969fcee04a4279 363 Gene3D G3DSA:3.20.20.70 185 225 1.5E-7 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS08955 8d6c6d6bebdfe70969969fcee04a4279 363 Gene3D G3DSA:3.20.20.70 27 118 1.5E-7 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS08955 8d6c6d6bebdfe70969969fcee04a4279 363 PANTHER PTHR30454 6 357 7.0E-204 T 22-04-2016 SCD_RS08955 8d6c6d6bebdfe70969969fcee04a4279 363 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 6 356 34.923 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SCD_RS00120 b45ddb1a6ae2ca70582c21b9401b33bc 151 PANTHER PTHR37164 3 148 1.0E-28 T 22-04-2016 SCD_RS00120 b45ddb1a6ae2ca70582c21b9401b33bc 151 ProSitePatterns PS00550 Hemerythrin family signature. 59 82 - T 22-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 SCD_RS00120 b45ddb1a6ae2ca70582c21b9401b33bc 151 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 7 132 3.3E-34 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SCD_RS00120 b45ddb1a6ae2ca70582c21b9401b33bc 151 Gene3D G3DSA:1.20.120.50 4 132 1.6E-34 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SCD_RS00120 b45ddb1a6ae2ca70582c21b9401b33bc 151 Pfam PF01814 Hemerythrin HHE cation binding domain 17 126 8.6E-9 T 22-04-2016 IPR012312 Haemerythrin-like SCD_RS00120 b45ddb1a6ae2ca70582c21b9401b33bc 151 SUPERFAMILY SSF47188 5 132 8.89E-33 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SCD_RS13620 056fe73053b67bf6ef821b08c3c8d1a2 266 SMART SM00563 88 196 1.7E-11 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SCD_RS13620 056fe73053b67bf6ef821b08c3c8d1a2 266 Pfam PF01553 Acyltransferase 75 193 9.9E-12 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SCD_RS13620 056fe73053b67bf6ef821b08c3c8d1a2 266 Gene3D G3DSA:3.40.1130.10 80 193 2.4E-4 T 22-04-2016 SCD_RS13620 056fe73053b67bf6ef821b08c3c8d1a2 266 SUPERFAMILY SSF69593 9 243 1.7E-19 T 22-04-2016 SCD_RS13620 056fe73053b67bf6ef821b08c3c8d1a2 266 PANTHER PTHR10434 1 250 3.3E-14 T 22-04-2016 SCD_RS04370 ab27dd4b9893713404914eabf56ae6d0 261 PANTHER PTHR11142 1 251 2.2E-87 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS04370 ab27dd4b9893713404914eabf56ae6d0 261 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.723 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS04370 ab27dd4b9893713404914eabf56ae6d0 261 SUPERFAMILY SSF55120 1 253 1.35E-87 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS04370 ab27dd4b9893713404914eabf56ae6d0 261 Gene3D G3DSA:3.30.70.660 106 241 2.2E-44 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS04370 ab27dd4b9893713404914eabf56ae6d0 261 Gene3D G3DSA:3.30.70.580 1 104 1.7E-34 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS04370 ab27dd4b9893713404914eabf56ae6d0 261 PIRSF PIRSF001430 1 256 5.5E-74 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS04370 ab27dd4b9893713404914eabf56ae6d0 261 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 3.2E-66 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS04370 ab27dd4b9893713404914eabf56ae6d0 261 Pfam PF01416 tRNA pseudouridine synthase 8 102 3.7E-7 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS04370 ab27dd4b9893713404914eabf56ae6d0 261 Pfam PF01416 tRNA pseudouridine synthase 143 244 8.4E-26 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS11215 b35be97558bcd89b5ac41b8d4c709586 607 Gene3D G3DSA:3.30.70.20 155 187 9.1E-12 T 22-04-2016 SCD_RS11215 b35be97558bcd89b5ac41b8d4c709586 607 Pfam PF13247 4Fe-4S dicluster domain 112 203 1.0E-22 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS11215 b35be97558bcd89b5ac41b8d4c709586 607 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 148 159 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS11215 b35be97558bcd89b5ac41b8d4c709586 607 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 283 568 1.3E-13 T 22-04-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 SCD_RS11215 b35be97558bcd89b5ac41b8d4c709586 607 SUPERFAMILY SSF54862 58 232 4.4E-56 T 22-04-2016 SCD_RS11215 b35be97558bcd89b5ac41b8d4c709586 607 Gene3D G3DSA:3.30.70.20 60 120 3.4E-27 T 22-04-2016 SCD_RS11215 b35be97558bcd89b5ac41b8d4c709586 607 Gene3D G3DSA:3.30.70.20 188 236 3.4E-27 T 22-04-2016 SCD_RS11215 b35be97558bcd89b5ac41b8d4c709586 607 PANTHER PTHR11938 58 206 3.2E-39 T 22-04-2016 SCD_RS11215 b35be97558bcd89b5ac41b8d4c709586 607 Gene3D G3DSA:3.30.70.20 121 154 3.9E-9 T 22-04-2016 SCD_RS07070 c6cf9270782fa2172428b03bb73ada8f 111 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 16 94 3.8E-10 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SCD_RS07070 c6cf9270782fa2172428b03bb73ada8f 111 PANTHER PTHR35601 13 107 4.1E-26 T 22-04-2016 SCD_RS07070 c6cf9270782fa2172428b03bb73ada8f 111 SUPERFAMILY SSF143011 14 94 1.23E-16 T 22-04-2016 SCD_RS07070 c6cf9270782fa2172428b03bb73ada8f 111 PANTHER PTHR35601:SF1 13 107 4.1E-26 T 22-04-2016 SCD_RS12010 e7c6fb41ad0ee9dea3e5c5b2b01d11c5 1121 SMART SM00642 33 432 1.4E-102 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SCD_RS12010 e7c6fb41ad0ee9dea3e5c5b2b01d11c5 1121 PANTHER PTHR10357:SF164 15 417 4.4E-273 T 22-04-2016 SCD_RS12010 e7c6fb41ad0ee9dea3e5c5b2b01d11c5 1121 PANTHER PTHR10357:SF164 456 586 4.4E-273 T 22-04-2016 SCD_RS12010 e7c6fb41ad0ee9dea3e5c5b2b01d11c5 1121 Pfam PF16657 Maltogenic Amylase, C-terminal domain 480 556 3.5E-28 T 22-04-2016 IPR032091 Maltogenic Amylase, C-terminal SCD_RS12010 e7c6fb41ad0ee9dea3e5c5b2b01d11c5 1121 Gene3D G3DSA:3.90.400.10 125 193 9.7E-24 T 22-04-2016 SCD_RS12010 e7c6fb41ad0ee9dea3e5c5b2b01d11c5 1121 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 25 560 1.7E-279 T 22-04-2016 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622 SCD_RS12010 e7c6fb41ad0ee9dea3e5c5b2b01d11c5 1121 SUPERFAMILY SSF56112 770 1113 8.37E-11 T 22-04-2016 IPR011009 Protein kinase-like domain SCD_RS12010 e7c6fb41ad0ee9dea3e5c5b2b01d11c5 1121 TIGRFAM TIGR02457 TreS_Cterm: putative maltokinase 602 1112 4.3E-143 T 22-04-2016 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain SCD_RS12010 e7c6fb41ad0ee9dea3e5c5b2b01d11c5 1121 Gene3D G3DSA:3.20.20.80 459 473 2.1E-108 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SCD_RS12010 e7c6fb41ad0ee9dea3e5c5b2b01d11c5 1121 Gene3D G3DSA:3.20.20.80 201 426 2.1E-108 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SCD_RS12010 e7c6fb41ad0ee9dea3e5c5b2b01d11c5 1121 Gene3D G3DSA:3.20.20.80 27 124 2.1E-108 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SCD_RS12010 e7c6fb41ad0ee9dea3e5c5b2b01d11c5 1121 SUPERFAMILY SSF51011 480 560 8.64E-17 T 22-04-2016 SCD_RS12010 e7c6fb41ad0ee9dea3e5c5b2b01d11c5 1121 SUPERFAMILY SSF51445 22 343 3.25E-130 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SCD_RS12010 e7c6fb41ad0ee9dea3e5c5b2b01d11c5 1121 SUPERFAMILY SSF51445 370 477 3.25E-130 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SCD_RS12010 e7c6fb41ad0ee9dea3e5c5b2b01d11c5 1121 Pfam PF00128 Alpha amylase, catalytic domain 48 401 1.0E-77 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SCD_RS12010 e7c6fb41ad0ee9dea3e5c5b2b01d11c5 1121 Gene3D G3DSA:2.60.40.1180 480 555 4.0E-18 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta SCD_RS12010 e7c6fb41ad0ee9dea3e5c5b2b01d11c5 1121 PANTHER PTHR10357 15 417 4.4E-273 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SCD_RS12010 e7c6fb41ad0ee9dea3e5c5b2b01d11c5 1121 PANTHER PTHR10357 456 586 4.4E-273 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SCD_RS02440 eb292a71c73c86153b9e159374e41d38 364 SUPERFAMILY SSF50182 183 250 1.54E-14 T 22-04-2016 IPR010920 LSM domain SCD_RS02440 eb292a71c73c86153b9e159374e41d38 364 PANTHER PTHR30566 17 355 2.0E-86 T 22-04-2016 SCD_RS02440 eb292a71c73c86153b9e159374e41d38 364 Gene3D G3DSA:2.30.30.60 199 249 2.3E-13 T 22-04-2016 SCD_RS02440 eb292a71c73c86153b9e159374e41d38 364 PANTHER PTHR30566:SF5 17 355 2.0E-86 T 22-04-2016 SCD_RS02440 eb292a71c73c86153b9e159374e41d38 364 SUPERFAMILY SSF82689 252 354 1.57E-17 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SCD_RS02440 eb292a71c73c86153b9e159374e41d38 364 Gene3D G3DSA:3.30.70.100 254 342 9.5E-11 T 22-04-2016 SCD_RS02440 eb292a71c73c86153b9e159374e41d38 364 Pfam PF00924 Mechanosensitive ion channel 141 345 5.9E-51 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SCD_RS02440 eb292a71c73c86153b9e159374e41d38 364 SUPERFAMILY SSF82861 100 182 9.15E-14 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SCD_RS13395 1636ed107ace09cdde6f47b74e0ee55e 246 Pfam PF13247 4Fe-4S dicluster domain 105 202 2.5E-17 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS13395 1636ed107ace09cdde6f47b74e0ee55e 246 Gene3D G3DSA:3.30.70.20 174 229 1.2E-15 T 22-04-2016 SCD_RS13395 1636ed107ace09cdde6f47b74e0ee55e 246 Gene3D G3DSA:3.30.70.20 115 163 3.5E-25 T 22-04-2016 SCD_RS13395 1636ed107ace09cdde6f47b74e0ee55e 246 Gene3D G3DSA:3.30.70.20 48 113 1.7E-11 T 22-04-2016 SCD_RS13395 1636ed107ace09cdde6f47b74e0ee55e 246 PANTHER PTHR11938:SF86 39 224 9.0E-48 T 22-04-2016 SCD_RS13395 1636ed107ace09cdde6f47b74e0ee55e 246 SUPERFAMILY SSF54862 48 227 8.16E-52 T 22-04-2016 SCD_RS13395 1636ed107ace09cdde6f47b74e0ee55e 246 PANTHER PTHR11938 39 224 9.0E-48 T 22-04-2016 SCD_RS13395 1636ed107ace09cdde6f47b74e0ee55e 246 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS09770 bb5f1001ff654785c66c40a8da2eb5f2 96 Pfam PF03658 RnfH family Ubiquitin 1 83 3.7E-36 T 22-04-2016 IPR005346 RnfH protein SCD_RS09770 bb5f1001ff654785c66c40a8da2eb5f2 96 SUPERFAMILY SSF54285 1 75 4.3E-27 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SCD_RS09770 bb5f1001ff654785c66c40a8da2eb5f2 96 Hamap MF_00460 Protein RnfH [rnfH]. 1 91 25.388 T 22-04-2016 IPR005346 RnfH protein SCD_RS09770 bb5f1001ff654785c66c40a8da2eb5f2 96 PANTHER PTHR37483:SF1 1 84 2.7E-31 T 22-04-2016 SCD_RS09770 bb5f1001ff654785c66c40a8da2eb5f2 96 Gene3D G3DSA:3.10.20.280 1 84 4.4E-35 T 22-04-2016 IPR005346 RnfH protein SCD_RS09770 bb5f1001ff654785c66c40a8da2eb5f2 96 PANTHER PTHR37483 1 84 2.7E-31 T 22-04-2016 SCD_RS02900 13ad870f767e4e8796c7de51b49d7a45 417 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 1.5E-182 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS02900 13ad870f767e4e8796c7de51b49d7a45 417 PANTHER PTHR21090 1 416 2.7E-211 T 22-04-2016 SCD_RS02900 13ad870f767e4e8796c7de51b49d7a45 417 Gene3D G3DSA:3.65.10.10 221 416 3.6E-61 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SCD_RS02900 13ad870f767e4e8796c7de51b49d7a45 417 Gene3D G3DSA:3.65.10.10 21 220 1.5E-71 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SCD_RS02900 13ad870f767e4e8796c7de51b49d7a45 417 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 406 1.5E-117 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SCD_RS02900 13ad870f767e4e8796c7de51b49d7a45 417 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 47.836 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS02900 13ad870f767e4e8796c7de51b49d7a45 417 SUPERFAMILY SSF55205 1 416 1.96E-148 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SCD_RS04775 cb78428fd0c2a0f643c0ccaae13faaeb 182 Gene3D G3DSA:3.40.50.9200 23 117 1.1E-9 T 22-04-2016 IPR015032 MTH538 TIR-like domain SCD_RS04775 cb78428fd0c2a0f643c0ccaae13faaeb 182 SUPERFAMILY SSF52206 71 117 1.57E-6 T 22-04-2016 IPR015032 MTH538 TIR-like domain SCD_RS04775 cb78428fd0c2a0f643c0ccaae13faaeb 182 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 23 127 5.4E-25 T 22-04-2016 IPR015032 MTH538 TIR-like domain SCD_RS01560 916e56654175b19b8f2aa62c6726c2cb 456 Gene3D G3DSA:2.40.160.10 115 388 5.4E-15 T 22-04-2016 IPR023614 Porin domain SCD_RS01560 916e56654175b19b8f2aa62c6726c2cb 456 PANTHER PTHR11603 130 242 2.4E-14 T 22-04-2016 SCD_RS01560 916e56654175b19b8f2aa62c6726c2cb 456 PANTHER PTHR11603:SF148 130 242 2.4E-14 T 22-04-2016 SCD_RS01560 916e56654175b19b8f2aa62c6726c2cb 456 SUPERFAMILY SSF56935 129 432 5.27E-13 T 22-04-2016 SCD_RS06670 499f161e7ae1747b7dd1caf2bf6f799e 386 PANTHER PTHR12526 1 386 5.7E-32 T 22-04-2016 SCD_RS06670 499f161e7ae1747b7dd1caf2bf6f799e 386 Pfam PF13579 Glycosyl transferase 4-like domain 49 168 3.0E-9 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SCD_RS06670 499f161e7ae1747b7dd1caf2bf6f799e 386 Gene3D G3DSA:3.40.50.2000 190 363 1.3E-20 T 22-04-2016 SCD_RS06670 499f161e7ae1747b7dd1caf2bf6f799e 386 Pfam PF00534 Glycosyl transferases group 1 206 363 3.7E-28 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SCD_RS06670 499f161e7ae1747b7dd1caf2bf6f799e 386 SUPERFAMILY SSF53756 2 384 1.15E-54 T 22-04-2016 SCD_RS06670 499f161e7ae1747b7dd1caf2bf6f799e 386 PANTHER PTHR12526:SF374 1 386 5.7E-32 T 22-04-2016 SCD_RS12555 0ff90fd1b702050cce5d93732cd994e4 746 Gene3D G3DSA:2.40.170.20 171 746 8.2E-52 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SCD_RS12555 0ff90fd1b702050cce5d93732cd994e4 746 PANTHER PTHR32552:SF11 6 222 2.3E-40 T 22-04-2016 SCD_RS12555 0ff90fd1b702050cce5d93732cd994e4 746 PANTHER PTHR32552:SF11 238 440 2.3E-40 T 22-04-2016 SCD_RS12555 0ff90fd1b702050cce5d93732cd994e4 746 PANTHER PTHR32552:SF11 460 746 2.3E-40 T 22-04-2016 SCD_RS12555 0ff90fd1b702050cce5d93732cd994e4 746 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 151 1.9E-10 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SCD_RS12555 0ff90fd1b702050cce5d93732cd994e4 746 Gene3D G3DSA:2.170.130.10 24 159 1.2E-15 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SCD_RS12555 0ff90fd1b702050cce5d93732cd994e4 746 PANTHER PTHR32552 6 222 2.3E-40 T 22-04-2016 SCD_RS12555 0ff90fd1b702050cce5d93732cd994e4 746 PANTHER PTHR32552 238 440 2.3E-40 T 22-04-2016 SCD_RS12555 0ff90fd1b702050cce5d93732cd994e4 746 PANTHER PTHR32552 460 746 2.3E-40 T 22-04-2016 SCD_RS12555 0ff90fd1b702050cce5d93732cd994e4 746 SUPERFAMILY SSF56935 248 437 3.41E-78 T 22-04-2016 SCD_RS12555 0ff90fd1b702050cce5d93732cd994e4 746 SUPERFAMILY SSF56935 33 221 3.41E-78 T 22-04-2016 SCD_RS12555 0ff90fd1b702050cce5d93732cd994e4 746 SUPERFAMILY SSF56935 464 746 3.41E-78 T 22-04-2016 SCD_RS09040 35bf5f9aee6eec02caa8130971c3b835 117 Pfam PF13682 Chemoreceptor zinc-binding domain 14 78 2.2E-10 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SCD_RS09865 bb8742a60351b0f5055d07c31742fbc5 296 Pfam PF00582 Universal stress protein family 4 147 1.6E-25 T 22-04-2016 IPR006016 UspA GO:0006950 SCD_RS09865 bb8742a60351b0f5055d07c31742fbc5 296 Pfam PF00582 Universal stress protein family 154 294 4.8E-26 T 22-04-2016 IPR006016 UspA GO:0006950 SCD_RS09865 bb8742a60351b0f5055d07c31742fbc5 296 PANTHER PTHR31964 139 294 1.1E-27 T 22-04-2016 SCD_RS09865 bb8742a60351b0f5055d07c31742fbc5 296 PRINTS PR01438 Universal stress protein signature 273 295 5.9E-16 T 22-04-2016 IPR006015 Universal stress protein A SCD_RS09865 bb8742a60351b0f5055d07c31742fbc5 296 PRINTS PR01438 Universal stress protein signature 255 267 5.9E-16 T 22-04-2016 IPR006015 Universal stress protein A SCD_RS09865 bb8742a60351b0f5055d07c31742fbc5 296 PRINTS PR01438 Universal stress protein signature 154 172 5.9E-16 T 22-04-2016 IPR006015 Universal stress protein A SCD_RS09865 bb8742a60351b0f5055d07c31742fbc5 296 SUPERFAMILY SSF52402 4 149 7.87E-29 T 22-04-2016 SCD_RS09865 bb8742a60351b0f5055d07c31742fbc5 296 SUPERFAMILY SSF52402 153 294 1.93E-31 T 22-04-2016 SCD_RS09865 bb8742a60351b0f5055d07c31742fbc5 296 Gene3D G3DSA:3.40.50.620 144 295 2.2E-35 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS09865 bb8742a60351b0f5055d07c31742fbc5 296 Gene3D G3DSA:3.40.50.620 2 143 3.4E-30 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS05480 a4482b9ff210146d25500e3ff0f1afb1 253 Gene3D G3DSA:3.40.390.10 39 247 1.8E-34 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SCD_RS05480 a4482b9ff210146d25500e3ff0f1afb1 253 PANTHER PTHR30164 1 253 4.3E-85 T 22-04-2016 SCD_RS05480 a4482b9ff210146d25500e3ff0f1afb1 253 Pfam PF06167 Glucose-regulated metallo-peptidase M90 5 247 6.9E-91 T 22-04-2016 IPR010384 MtfA family SCD_RS05480 a4482b9ff210146d25500e3ff0f1afb1 253 SUPERFAMILY SSF55486 41 249 1.17E-43 T 22-04-2016 SCD_RS00950 08954c7f9c21eda63008ef718aba42f7 272 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 5 269 2.9E-80 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SCD_RS00950 08954c7f9c21eda63008ef718aba42f7 272 SUPERFAMILY SSF53223 2 102 8.06E-31 T 22-04-2016 SCD_RS00950 08954c7f9c21eda63008ef718aba42f7 272 SUPERFAMILY SSF51735 103 269 2.44E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS00950 08954c7f9c21eda63008ef718aba42f7 272 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 118 194 3.1E-8 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase SCD_RS00950 08954c7f9c21eda63008ef718aba42f7 272 Gene3D G3DSA:3.40.192.10 2 109 5.8E-38 T 22-04-2016 SCD_RS00950 08954c7f9c21eda63008ef718aba42f7 272 Gene3D G3DSA:3.40.50.720 110 247 2.7E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS00950 08954c7f9c21eda63008ef718aba42f7 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 1.1E-23 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SCD_RS00950 08954c7f9c21eda63008ef718aba42f7 272 PANTHER PTHR21089:SF2 1 271 3.2E-127 T 22-04-2016 SCD_RS00950 08954c7f9c21eda63008ef718aba42f7 272 PANTHER PTHR21089 1 271 3.2E-127 T 22-04-2016 SCD_RS00950 08954c7f9c21eda63008ef718aba42f7 272 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 270 31.837 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SCD_RS07085 71901d26ce51157fd72e2a2dac59820f 1034 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 450 456 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SCD_RS07085 71901d26ce51157fd72e2a2dac59820f 1034 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 447 459 1.0E-13 T 22-04-2016 SCD_RS07085 71901d26ce51157fd72e2a2dac59820f 1034 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 303 319 1.0E-13 T 22-04-2016 SCD_RS07085 71901d26ce51157fd72e2a2dac59820f 1034 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 338 352 1.0E-13 T 22-04-2016 SCD_RS07085 71901d26ce51157fd72e2a2dac59820f 1034 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 496 520 1.0E-13 T 22-04-2016 SCD_RS07085 71901d26ce51157fd72e2a2dac59820f 1034 SUPERFAMILY SSF53335 197 413 2.11E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS07085 71901d26ce51157fd72e2a2dac59820f 1034 SUPERFAMILY SSF53335 445 587 2.11E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS07085 71901d26ce51157fd72e2a2dac59820f 1034 Gene3D G3DSA:3.40.50.150 305 585 5.0E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS07085 71901d26ce51157fd72e2a2dac59820f 1034 Pfam PF02384 N-6 DNA Methylase 284 475 6.7E-9 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 SCD_RS02320 0b3a6a0d2c39052cb2a26f0d6c03b2ac 360 Gene3D G3DSA:3.30.160.20 213 288 2.5E-35 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SCD_RS02320 0b3a6a0d2c39052cb2a26f0d6c03b2ac 360 Pfam PF03462 PCRF domain 13 203 4.6E-73 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SCD_RS02320 0b3a6a0d2c39052cb2a26f0d6c03b2ac 360 PANTHER PTHR11075 1 356 3.0E-173 T 22-04-2016 SCD_RS02320 0b3a6a0d2c39052cb2a26f0d6c03b2ac 360 SMART SM00937 63 178 1.6E-63 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SCD_RS02320 0b3a6a0d2c39052cb2a26f0d6c03b2ac 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 2 356 1.8E-163 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SCD_RS02320 0b3a6a0d2c39052cb2a26f0d6c03b2ac 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SCD_RS02320 0b3a6a0d2c39052cb2a26f0d6c03b2ac 360 Gene3D G3DSA:1.20.58.410 8 94 2.4E-17 T 22-04-2016 SCD_RS02320 0b3a6a0d2c39052cb2a26f0d6c03b2ac 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.782 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SCD_RS02320 0b3a6a0d2c39052cb2a26f0d6c03b2ac 360 PANTHER PTHR11075:SF9 1 356 3.0E-173 T 22-04-2016 SCD_RS02320 0b3a6a0d2c39052cb2a26f0d6c03b2ac 360 SUPERFAMILY SSF75620 12 353 1.57E-136 T 22-04-2016 SCD_RS02320 0b3a6a0d2c39052cb2a26f0d6c03b2ac 360 Pfam PF00472 RF-1 domain 214 321 1.5E-42 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SCD_RS12950 f0f3e6a31731c8dc9f258084482c1372 238 SUPERFAMILY SSF55120 62 232 1.49E-36 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS12950 f0f3e6a31731c8dc9f258084482c1372 238 PANTHER PTHR21600 3 229 7.3E-38 T 22-04-2016 SCD_RS12950 f0f3e6a31731c8dc9f258084482c1372 238 Pfam PF00849 RNA pseudouridylate synthase 65 196 2.1E-13 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS12950 f0f3e6a31731c8dc9f258084482c1372 238 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 69 228 3.8E-34 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SCD_RS12950 f0f3e6a31731c8dc9f258084482c1372 238 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 103 117 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SCD_RS12950 f0f3e6a31731c8dc9f258084482c1372 238 PANTHER PTHR21600:SF19 3 229 7.3E-38 T 22-04-2016 SCD_RS12950 f0f3e6a31731c8dc9f258084482c1372 238 Gene3D G3DSA:3.10.290.10 6 66 1.8E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS12950 f0f3e6a31731c8dc9f258084482c1372 238 SUPERFAMILY SSF55174 6 91 3.36E-6 T 22-04-2016 SCD_RS03470 4ec2755ff437c8f1a8fe3fe78f4ba7b6 103 Pfam PF12966 N-ATPase, AtpR subunit 6 87 6.6E-30 T 22-04-2016 IPR017581 N-ATPase, AtpR subunit-like SCD_RS03470 4ec2755ff437c8f1a8fe3fe78f4ba7b6 103 TIGRFAM TIGR03165 F1F0_chp_2: F1/F0 ATPase, Methanosarcina type, subunit 2 6 87 6.0E-32 T 22-04-2016 IPR017581 N-ATPase, AtpR subunit-like SCD_RS02330 3115249882d58f486840fffd85485693 612 PANTHER PTHR32507 14 499 7.9E-136 T 22-04-2016 SCD_RS02330 3115249882d58f486840fffd85485693 612 Pfam PF00999 Sodium/hydrogen exchanger family 11 393 2.4E-45 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SCD_RS02330 3115249882d58f486840fffd85485693 612 SUPERFAMILY SSF51735 404 487 2.61E-7 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS02330 3115249882d58f486840fffd85485693 612 Pfam PF02254 TrkA-N domain 405 487 1.1E-5 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SCD_RS02330 3115249882d58f486840fffd85485693 612 Gene3D G3DSA:3.40.50.720 403 496 1.3E-7 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS02330 3115249882d58f486840fffd85485693 612 PANTHER PTHR32507:SF0 14 499 7.9E-136 T 22-04-2016 SCD_RS12525 437f3b7c4c1e8c830e705ef96db09a97 490 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 169 3.9E-33 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SCD_RS12525 437f3b7c4c1e8c830e705ef96db09a97 490 Pfam PF00425 chorismate binding enzyme 218 471 4.0E-100 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SCD_RS12525 437f3b7c4c1e8c830e705ef96db09a97 490 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 479 2.0E-172 T 22-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SCD_RS12525 437f3b7c4c1e8c830e705ef96db09a97 490 SUPERFAMILY SSF56322 14 481 5.63E-160 T 22-04-2016 IPR005801 ADC synthase GO:0009058 SCD_RS12525 437f3b7c4c1e8c830e705ef96db09a97 490 PRINTS PR00095 Anthranilate synthase component I signature 428 442 1.0E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SCD_RS12525 437f3b7c4c1e8c830e705ef96db09a97 490 PRINTS PR00095 Anthranilate synthase component I signature 333 346 1.0E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SCD_RS12525 437f3b7c4c1e8c830e705ef96db09a97 490 PRINTS PR00095 Anthranilate synthase component I signature 413 427 1.0E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SCD_RS12525 437f3b7c4c1e8c830e705ef96db09a97 490 PRINTS PR00095 Anthranilate synthase component I signature 319 332 1.0E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SCD_RS12525 437f3b7c4c1e8c830e705ef96db09a97 490 PANTHER PTHR11236 1 482 3.4E-228 T 22-04-2016 SCD_RS12525 437f3b7c4c1e8c830e705ef96db09a97 490 PANTHER PTHR11236:SF9 1 482 3.4E-228 T 22-04-2016 SCD_RS12525 437f3b7c4c1e8c830e705ef96db09a97 490 Gene3D G3DSA:3.60.120.10 12 481 1.7E-179 T 22-04-2016 IPR005801 ADC synthase GO:0009058 SCD_RS10355 96b84e7733e3a926a4084b7084b4a8ae 285 PANTHER PTHR10520 8 278 1.2E-140 T 22-04-2016 SCD_RS10355 96b84e7733e3a926a4084b7084b4a8ae 285 Pfam PF01842 ACT domain 7 49 8.6E-8 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SCD_RS10355 96b84e7733e3a926a4084b7084b4a8ae 285 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 3 284 47.606 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SCD_RS10355 96b84e7733e3a926a4084b7084b4a8ae 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 112 139 2.448812E-60 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SCD_RS10355 96b84e7733e3a926a4084b7084b4a8ae 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 40 52 2.448812E-60 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SCD_RS10355 96b84e7733e3a926a4084b7084b4a8ae 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 236 258 2.448812E-60 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SCD_RS10355 96b84e7733e3a926a4084b7084b4a8ae 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 8 34 2.448812E-60 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SCD_RS10355 96b84e7733e3a926a4084b7084b4a8ae 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 258 283 2.448812E-60 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SCD_RS10355 96b84e7733e3a926a4084b7084b4a8ae 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 90 112 2.448812E-60 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SCD_RS10355 96b84e7733e3a926a4084b7084b4a8ae 285 PANTHER PTHR10520:SF7 8 278 1.2E-140 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SCD_RS10355 96b84e7733e3a926a4084b7084b4a8ae 285 Gene3D G3DSA:3.40.50.170 89 281 5.7E-56 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS10355 96b84e7733e3a926a4084b7084b4a8ae 285 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 7 284 8.6E-121 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SCD_RS10355 96b84e7733e3a926a4084b7084b4a8ae 285 Pfam PF00551 Formyl transferase 90 264 2.0E-38 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS10355 96b84e7733e3a926a4084b7084b4a8ae 285 SUPERFAMILY SSF55021 2 88 5.41E-16 T 22-04-2016 SCD_RS10355 96b84e7733e3a926a4084b7084b4a8ae 285 PIRSF PIRSF036480 3 285 1.3E-116 T 22-04-2016 SCD_RS10355 96b84e7733e3a926a4084b7084b4a8ae 285 Gene3D G3DSA:3.30.70.260 2 82 1.8E-20 T 22-04-2016 SCD_RS10355 96b84e7733e3a926a4084b7084b4a8ae 285 SUPERFAMILY SSF53328 90 285 5.63E-60 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS04070 30444514096193d1ebb20c8de3677c11 163 SUPERFAMILY SSF55021 1 76 5.39E-24 T 22-04-2016 SCD_RS04070 30444514096193d1ebb20c8de3677c11 163 Gene3D G3DSA:3.30.70.1150 83 161 1.1E-28 T 22-04-2016 SCD_RS04070 30444514096193d1ebb20c8de3677c11 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 157 9.8E-65 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SCD_RS04070 30444514096193d1ebb20c8de3677c11 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 9.1E-26 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SCD_RS04070 30444514096193d1ebb20c8de3677c11 163 PANTHER PTHR30239 1 159 1.2E-86 T 22-04-2016 SCD_RS04070 30444514096193d1ebb20c8de3677c11 163 SUPERFAMILY SSF55021 80 162 3.81E-25 T 22-04-2016 SCD_RS04070 30444514096193d1ebb20c8de3677c11 163 Gene3D G3DSA:3.30.70.260 1 78 3.5E-38 T 22-04-2016 SCD_RS04070 30444514096193d1ebb20c8de3677c11 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 1.0E-33 T 22-04-2016 SCD_RS04070 30444514096193d1ebb20c8de3677c11 163 Pfam PF13710 ACT domain 13 73 3.4E-17 T 22-04-2016 SCD_RS12965 9dac9875d7f42de957e4434b6943c274 316 Pfam PF14572 Phosphoribosyl synthetase-associated domain 205 314 2.4E-28 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SCD_RS12965 9dac9875d7f42de957e4434b6943c274 316 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 123 1.2E-46 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SCD_RS12965 9dac9875d7f42de957e4434b6943c274 316 PANTHER PTHR10210 1 314 4.1E-179 T 22-04-2016 SCD_RS12965 9dac9875d7f42de957e4434b6943c274 316 PANTHER PTHR10210:SF41 1 314 4.1E-179 T 22-04-2016 SCD_RS12965 9dac9875d7f42de957e4434b6943c274 316 SUPERFAMILY SSF53271 71 306 6.39E-64 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SCD_RS12965 9dac9875d7f42de957e4434b6943c274 316 Gene3D G3DSA:3.40.50.2020 162 289 3.2E-53 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SCD_RS12965 9dac9875d7f42de957e4434b6943c274 316 Gene3D G3DSA:3.40.50.2020 4 161 3.8E-71 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SCD_RS12965 9dac9875d7f42de957e4434b6943c274 316 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 6 314 1.1E-120 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SCD_RS12965 9dac9875d7f42de957e4434b6943c274 316 SMART SM01400 6 123 9.1E-75 T 22-04-2016 SCD_RS12965 9dac9875d7f42de957e4434b6943c274 316 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 6 315 48.715 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SCD_RS12965 9dac9875d7f42de957e4434b6943c274 316 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 131 146 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 SCD_RS04865 74cfa206951c93b828e4c06742dab117 409 SMART SM00710 163 184 61.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SCD_RS04865 74cfa206951c93b828e4c06742dab117 409 SMART SM00710 207 232 7700.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SCD_RS04865 74cfa206951c93b828e4c06742dab117 409 SMART SM00710 259 280 510.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SCD_RS04865 74cfa206951c93b828e4c06742dab117 409 SMART SM00710 142 162 4000.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SCD_RS04865 74cfa206951c93b828e4c06742dab117 409 SMART SM00710 91 112 350.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SCD_RS04865 74cfa206951c93b828e4c06742dab117 409 SMART SM00710 63 90 2700.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SCD_RS04865 74cfa206951c93b828e4c06742dab117 409 SMART SM00710 185 206 920.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SCD_RS04865 74cfa206951c93b828e4c06742dab117 409 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 11 387 4.5E-99 T 22-04-2016 IPR026464 Nitrous oxide reductase family maturation protein NosD SCD_RS04865 74cfa206951c93b828e4c06742dab117 409 Pfam PF05048 Periplasmic copper-binding protein (NosD) 121 348 7.4E-39 T 22-04-2016 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain SCD_RS04865 74cfa206951c93b828e4c06742dab117 409 SUPERFAMILY SSF51126 5 374 5.47E-49 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor SCD_RS04865 74cfa206951c93b828e4c06742dab117 409 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 86 124 3.6E-6 T 22-04-2016 IPR022441 Parallel beta-helix repeat-2 SCD_RS04865 74cfa206951c93b828e4c06742dab117 409 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 160 195 5.4E-5 T 22-04-2016 IPR022441 Parallel beta-helix repeat-2 SCD_RS04865 74cfa206951c93b828e4c06742dab117 409 Gene3D G3DSA:2.160.20.10 6 321 1.6E-19 T 22-04-2016 IPR012334 Pectin lyase fold SCD_RS11520 af52b3a57bd7eefc2d4e1fa818d3360d 138 SUPERFAMILY SSF110916 12 100 4.32E-13 T 22-04-2016 SCD_RS11520 af52b3a57bd7eefc2d4e1fa818d3360d 138 PANTHER PTHR11075 10 138 2.4E-39 T 22-04-2016 SCD_RS11520 af52b3a57bd7eefc2d4e1fa818d3360d 138 Gene3D G3DSA:3.30.160.200 3 107 1.4E-34 T 22-04-2016 SCD_RS11520 af52b3a57bd7eefc2d4e1fa818d3360d 138 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SCD_RS11520 af52b3a57bd7eefc2d4e1fa818d3360d 138 Pfam PF00472 RF-1 domain 8 133 8.6E-28 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SCD_RS14525 b04af8a12aff6c964e513798ba7f59ee 206 Gene3D G3DSA:1.10.760.10 123 205 9.2E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS14525 b04af8a12aff6c964e513798ba7f59ee 206 PANTHER PTHR33751 13 206 1.1E-53 T 22-04-2016 SCD_RS14525 b04af8a12aff6c964e513798ba7f59ee 206 PIRSF PIRSF000005 1 206 1.4E-64 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 SCD_RS14525 b04af8a12aff6c964e513798ba7f59ee 206 Gene3D G3DSA:1.10.760.10 32 106 6.7E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS14525 b04af8a12aff6c964e513798ba7f59ee 206 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 28 101 5.3E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS14525 b04af8a12aff6c964e513798ba7f59ee 206 SUPERFAMILY SSF46626 117 204 3.64E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS14525 b04af8a12aff6c964e513798ba7f59ee 206 Pfam PF00034 Cytochrome c 119 204 3.4E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS14525 b04af8a12aff6c964e513798ba7f59ee 206 SUPERFAMILY SSF46626 23 105 7.13E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS14525 b04af8a12aff6c964e513798ba7f59ee 206 PANTHER PTHR33751:SF3 13 206 1.1E-53 T 22-04-2016 SCD_RS03960 38c1b9d5a1d3cfc114227941e7e8152f 159 Gene3D G3DSA:3.30.70.640 4 157 3.6E-66 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 SCD_RS03960 38c1b9d5a1d3cfc114227941e7e8152f 159 PANTHER PTHR22960 1 158 3.1E-89 T 22-04-2016 SCD_RS03960 38c1b9d5a1d3cfc114227941e7e8152f 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 35.154 T 22-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 SCD_RS03960 38c1b9d5a1d3cfc114227941e7e8152f 159 SUPERFAMILY SSF55040 11 155 9.81E-60 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 SCD_RS03960 38c1b9d5a1d3cfc114227941e7e8152f 159 Pfam PF01967 MoaC family 15 150 1.4E-51 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 SCD_RS03960 38c1b9d5a1d3cfc114227941e7e8152f 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 6.2E-61 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 SCD_RS00260 2b1ba642f82ca33ff42508e1f5707a80 623 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 22 189 6.9E-25 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 SCD_RS00260 2b1ba642f82ca33ff42508e1f5707a80 623 PANTHER PTHR21432 13 436 7.1E-147 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 SCD_RS00260 2b1ba642f82ca33ff42508e1f5707a80 623 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 281 434 5.8E-51 T 22-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain SCD_RS00260 2b1ba642f82ca33ff42508e1f5707a80 623 SUPERFAMILY SSF100950 196 444 4.94E-55 T 22-04-2016 SCD_RS00260 2b1ba642f82ca33ff42508e1f5707a80 623 Gene3D G3DSA:3.40.1080.10 17 192 2.3E-55 T 22-04-2016 SCD_RS00260 2b1ba642f82ca33ff42508e1f5707a80 623 Gene3D G3DSA:3.40.810.20 198 443 1.2E-36 T 22-04-2016 SCD_RS00260 2b1ba642f82ca33ff42508e1f5707a80 623 Gene3D G3DSA:3.40.630.30 468 602 2.5E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS00260 2b1ba642f82ca33ff42508e1f5707a80 623 PANTHER PTHR21432:SF18 13 436 7.1E-147 T 22-04-2016 SCD_RS00260 2b1ba642f82ca33ff42508e1f5707a80 623 SUPERFAMILY SSF100950 16 231 2.37E-43 T 22-04-2016 SCD_RS00260 2b1ba642f82ca33ff42508e1f5707a80 623 Pfam PF13302 Acetyltransferase (GNAT) domain 468 602 1.5E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SCD_RS00260 2b1ba642f82ca33ff42508e1f5707a80 623 SUPERFAMILY SSF55729 467 602 1.03E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS11780 189dd084dbaa03c274e228cbc0d3b65a 150 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 123 1.1E-21 T 22-04-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- SCD_RS11780 189dd084dbaa03c274e228cbc0d3b65a 150 SMART SM00855 2 106 7.9E-8 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SCD_RS11780 189dd084dbaa03c274e228cbc0d3b65a 150 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 64 5.2E-8 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SCD_RS11780 189dd084dbaa03c274e228cbc0d3b65a 150 Gene3D G3DSA:3.40.50.1240 1 150 2.0E-27 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SCD_RS11780 189dd084dbaa03c274e228cbc0d3b65a 150 SUPERFAMILY SSF53254 3 132 7.59E-21 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SCD_RS04405 5aa8b403c2e0ff7eacae93ee53e5de29 432 PIRSF PIRSF001563 8 431 4.5E-111 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SCD_RS04405 5aa8b403c2e0ff7eacae93ee53e5de29 432 Gene3D G3DSA:3.90.190.20 296 426 6.7E-41 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SCD_RS04405 5aa8b403c2e0ff7eacae93ee53e5de29 432 PANTHER PTHR11136:SF0 14 425 1.1E-123 T 22-04-2016 SCD_RS04405 5aa8b403c2e0ff7eacae93ee53e5de29 432 PANTHER PTHR11136 14 425 1.1E-123 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SCD_RS04405 5aa8b403c2e0ff7eacae93ee53e5de29 432 SUPERFAMILY SSF53623 14 292 6.8E-88 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS04405 5aa8b403c2e0ff7eacae93ee53e5de29 432 TIGRFAM TIGR01499 folC: bifunctional protein FolC 34 424 5.1E-101 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SCD_RS04405 5aa8b403c2e0ff7eacae93ee53e5de29 432 Pfam PF08245 Mur ligase middle domain 55 199 3.0E-10 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS04405 5aa8b403c2e0ff7eacae93ee53e5de29 432 SUPERFAMILY SSF53244 294 425 8.97E-32 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SCD_RS04405 5aa8b403c2e0ff7eacae93ee53e5de29 432 Pfam PF02875 Mur ligase family, glutamate ligase domain 294 347 1.4E-6 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SCD_RS04405 5aa8b403c2e0ff7eacae93ee53e5de29 432 Gene3D G3DSA:3.40.1190.10 14 294 8.3E-90 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS15690 87275011f08dbda507e9571f242b1d9c 724 Gene3D G3DSA:3.30.450.40 154 306 3.4E-12 T 22-04-2016 IPR029016 GAF domain-like SCD_RS15690 87275011f08dbda507e9571f242b1d9c 724 SUPERFAMILY SSF55781 161 306 2.18E-13 T 22-04-2016 IPR029016 GAF domain-like SCD_RS15690 87275011f08dbda507e9571f242b1d9c 724 Gene3D G3DSA:3.30.70.270 308 468 1.9E-51 T 22-04-2016 SCD_RS15690 87275011f08dbda507e9571f242b1d9c 724 SMART SM00267 295 467 1.7E-57 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15690 87275011f08dbda507e9571f242b1d9c 724 Gene3D G3DSA:3.30.450.20 22 128 1.5E-6 T 22-04-2016 SCD_RS15690 87275011f08dbda507e9571f242b1d9c 724 Pfam PF01590 GAF domain 171 291 4.6E-7 T 22-04-2016 IPR003018 GAF domain GO:0005515 SCD_RS15690 87275011f08dbda507e9571f242b1d9c 724 SMART SM00052 473 724 4.9E-49 T 22-04-2016 IPR001633 EAL domain SCD_RS15690 87275011f08dbda507e9571f242b1d9c 724 Pfam PF00990 Diguanylate cyclase, GGDEF domain 306 462 5.3E-43 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15690 87275011f08dbda507e9571f242b1d9c 724 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 302 466 2.0E-45 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15690 87275011f08dbda507e9571f242b1d9c 724 SUPERFAMILY SSF55785 22 129 2.09E-7 T 22-04-2016 IPR000014 PAS domain SCD_RS15690 87275011f08dbda507e9571f242b1d9c 724 Gene3D G3DSA:3.20.20.450 480 722 6.8E-63 T 22-04-2016 IPR001633 EAL domain SCD_RS15690 87275011f08dbda507e9571f242b1d9c 724 SUPERFAMILY SSF141868 480 722 5.1E-62 T 22-04-2016 IPR001633 EAL domain SCD_RS15690 87275011f08dbda507e9571f242b1d9c 724 PANTHER PTHR33121 481 723 9.9E-52 T 22-04-2016 SCD_RS15690 87275011f08dbda507e9571f242b1d9c 724 SMART SM00065 142 303 3.9E-5 T 22-04-2016 IPR003018 GAF domain GO:0005515 SCD_RS15690 87275011f08dbda507e9571f242b1d9c 724 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 36 131 3.2E-6 T 22-04-2016 IPR000014 PAS domain SCD_RS15690 87275011f08dbda507e9571f242b1d9c 724 SUPERFAMILY SSF55073 311 466 7.22E-45 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS15690 87275011f08dbda507e9571f242b1d9c 724 Pfam PF00563 EAL domain 480 722 5.2E-53 T 22-04-2016 IPR001633 EAL domain SCD_RS15690 87275011f08dbda507e9571f242b1d9c 724 PANTHER PTHR33121:SF10 481 723 9.9E-52 T 22-04-2016 SCD_RS01690 a5b3e4ffe05cfef937562299ca35df84 217 Gene3D G3DSA:3.40.50.2300 1 146 6.0E-35 T 22-04-2016 SCD_RS01690 a5b3e4ffe05cfef937562299ca35df84 217 Pfam PF00072 Response regulator receiver domain 1 111 4.3E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS01690 a5b3e4ffe05cfef937562299ca35df84 217 Gene3D G3DSA:1.10.10.10 147 208 6.9E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS01690 a5b3e4ffe05cfef937562299ca35df84 217 PANTHER PTHR26402:SF151 1 205 5.0E-61 T 22-04-2016 SCD_RS01690 a5b3e4ffe05cfef937562299ca35df84 217 SMART SM00448 1 111 2.0E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS01690 a5b3e4ffe05cfef937562299ca35df84 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS01690 a5b3e4ffe05cfef937562299ca35df84 217 PANTHER PTHR26402 1 205 5.0E-61 T 22-04-2016 SCD_RS01690 a5b3e4ffe05cfef937562299ca35df84 217 SMART SM00421 146 203 1.6E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS01690 a5b3e4ffe05cfef937562299ca35df84 217 SUPERFAMILY SSF46894 141 208 8.16E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SCD_RS01690 a5b3e4ffe05cfef937562299ca35df84 217 SUPERFAMILY SSF52172 1 124 2.42E-30 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS01690 a5b3e4ffe05cfef937562299ca35df84 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 6.7E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS01690 a5b3e4ffe05cfef937562299ca35df84 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 6.7E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS01690 a5b3e4ffe05cfef937562299ca35df84 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 6.7E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS01690 a5b3e4ffe05cfef937562299ca35df84 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 203 6.4E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SCD_RS05405 9dc55c7e812b0ea5ad95d5d6dd371480 191 PANTHER PTHR33516 5 191 8.5E-41 T 22-04-2016 SCD_RS05405 9dc55c7e812b0ea5ad95d5d6dd371480 191 Gene3D G3DSA:2.10.109.10 78 190 1.8E-39 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SCD_RS05405 9dc55c7e812b0ea5ad95d5d6dd371480 191 Gene3D G3DSA:1.10.10.10 5 58 3.3E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS05405 9dc55c7e812b0ea5ad95d5d6dd371480 191 Pfam PF00717 Peptidase S24-like 108 172 1.8E-15 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B SCD_RS05405 9dc55c7e812b0ea5ad95d5d6dd371480 191 SUPERFAMILY SSF51306 73 188 1.12E-32 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SCD_RS05405 9dc55c7e812b0ea5ad95d5d6dd371480 191 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 105 115 1.0E-6 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SCD_RS05405 9dc55c7e812b0ea5ad95d5d6dd371480 191 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 144 156 1.0E-6 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SCD_RS05405 9dc55c7e812b0ea5ad95d5d6dd371480 191 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 116 127 1.0E-6 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SCD_RS14380 8a1d779d634c26f74a18e7570ec4ec25 386 PIRSF PIRSF000390 1 386 2.1E-112 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SCD_RS14380 8a1d779d634c26f74a18e7570ec4ec25 386 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 1 383 4.5E-174 T 22-04-2016 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase SCD_RS14380 8a1d779d634c26f74a18e7570ec4ec25 386 PANTHER PTHR30244:SF3 1 386 1.5E-141 T 22-04-2016 SCD_RS14380 8a1d779d634c26f74a18e7570ec4ec25 386 SUPERFAMILY SSF53383 2 384 4.08E-114 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS14380 8a1d779d634c26f74a18e7570ec4ec25 386 Gene3D G3DSA:3.40.640.10 1 258 8.7E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS14380 8a1d779d634c26f74a18e7570ec4ec25 386 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 9 381 4.9E-115 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SCD_RS14380 8a1d779d634c26f74a18e7570ec4ec25 386 Gene3D G3DSA:3.90.1150.10 260 385 2.0E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS14380 8a1d779d634c26f74a18e7570ec4ec25 386 PANTHER PTHR30244 1 386 1.5E-141 T 22-04-2016 SCD_RS08710 b58c37d67f281c50c100aeedc2927059 186 TIGRFAM TIGR00296 TIGR00296: uncharacterized protein, PH0010 family 3 184 1.4E-30 T 22-04-2016 IPR023473 AMMECR1 SCD_RS08710 b58c37d67f281c50c100aeedc2927059 186 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 10 180 8.3E-57 T 22-04-2016 IPR027623 AmmeMemoRadiSam system protein A SCD_RS08710 b58c37d67f281c50c100aeedc2927059 186 SUPERFAMILY SSF143447 3 183 1.44E-53 T 22-04-2016 IPR002733 AMMECR1 domain SCD_RS08710 b58c37d67f281c50c100aeedc2927059 186 Gene3D G3DSA:3.30.700.20 3 120 1.8E-35 T 22-04-2016 IPR027485 AMMECR1, N-terminal SCD_RS08710 b58c37d67f281c50c100aeedc2927059 186 Pfam PF01871 AMMECR1 14 179 5.7E-42 T 22-04-2016 IPR002733 AMMECR1 domain SCD_RS08710 b58c37d67f281c50c100aeedc2927059 186 Gene3D G3DSA:3.30.1490.150 121 176 8.9E-19 T 22-04-2016 SCD_RS08710 b58c37d67f281c50c100aeedc2927059 186 PANTHER PTHR13016 42 183 1.5E-26 T 22-04-2016 IPR023473 AMMECR1 SCD_RS09880 25c11c8f84637d5c7630720181a9b6bd 134 Pfam PF00581 Rhodanese-like domain 29 126 7.4E-14 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS09880 25c11c8f84637d5c7630720181a9b6bd 134 SMART SM00450 24 130 9.8E-13 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS09880 25c11c8f84637d5c7630720181a9b6bd 134 PANTHER PTHR12231 22 133 4.0E-16 T 22-04-2016 SCD_RS09880 25c11c8f84637d5c7630720181a9b6bd 134 Gene3D G3DSA:3.40.250.10 18 131 9.9E-25 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS09880 25c11c8f84637d5c7630720181a9b6bd 134 SUPERFAMILY SSF52821 13 133 2.36E-22 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS00905 ee73fca33d99b131cf865bd046c25a5a 348 Pfam PF01384 Phosphate transporter family 182 333 1.6E-41 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SCD_RS00905 ee73fca33d99b131cf865bd046c25a5a 348 Pfam PF01384 Phosphate transporter family 22 176 2.3E-37 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SCD_RS00905 ee73fca33d99b131cf865bd046c25a5a 348 PANTHER PTHR11101 1 341 4.7E-75 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SCD_RS08720 0b8af9aca2e8d4ac079548dd7c3b11cd 221 SUPERFAMILY SSF53474 12 213 7.65E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SCD_RS08720 0b8af9aca2e8d4ac079548dd7c3b11cd 221 Gene3D G3DSA:3.40.50.1820 4 211 1.8E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SCD_RS08720 0b8af9aca2e8d4ac079548dd7c3b11cd 221 Pfam PF01738 Dienelactone hydrolase family 19 202 3.1E-7 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 SCD_RS10370 cd8dc1ed2db12d6229ba96d709c66655 231 SMART SM00100 22 139 1.1E-9 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SCD_RS10370 cd8dc1ed2db12d6229ba96d709c66655 231 PANTHER PTHR24567 10 218 2.5E-29 T 22-04-2016 SCD_RS10370 cd8dc1ed2db12d6229ba96d709c66655 231 Pfam PF00027 Cyclic nucleotide-binding domain 43 125 8.1E-16 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SCD_RS10370 cd8dc1ed2db12d6229ba96d709c66655 231 Gene3D G3DSA:2.60.120.10 18 147 3.2E-18 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SCD_RS10370 cd8dc1ed2db12d6229ba96d709c66655 231 PANTHER PTHR24567:SF28 10 218 2.5E-29 T 22-04-2016 SCD_RS10370 cd8dc1ed2db12d6229ba96d709c66655 231 SUPERFAMILY SSF51206 15 153 3.67E-24 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like SCD_RS10370 cd8dc1ed2db12d6229ba96d709c66655 231 SUPERFAMILY SSF46785 156 212 8.41E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS10370 cd8dc1ed2db12d6229ba96d709c66655 231 Gene3D G3DSA:1.10.10.10 156 217 2.1E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS10370 cd8dc1ed2db12d6229ba96d709c66655 231 Pfam PF13545 Crp-like helix-turn-helix domain 159 210 2.1E-10 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SCD_RS03505 9ccf6b703c14df3418509ae398a47352 792 Pfam PF09364 XFP N-terminal domain 14 387 2.7E-194 T 22-04-2016 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal SCD_RS03505 9ccf6b703c14df3418509ae398a47352 792 Hamap MF_01403 Probable phosphoketolase. 8 792 42.012 T 22-04-2016 IPR023962 Probable phosphoketolase SCD_RS03505 9ccf6b703c14df3418509ae398a47352 792 ProSitePatterns PS60002 Phosphoketolase signature 1. 147 153 - T 22-04-2016 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site GO:0005975|GO:0016832 SCD_RS03505 9ccf6b703c14df3418509ae398a47352 792 SUPERFAMILY SSF52518 5 371 4.63E-80 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS03505 9ccf6b703c14df3418509ae398a47352 792 Gene3D G3DSA:3.40.50.970 16 369 1.1E-22 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS03505 9ccf6b703c14df3418509ae398a47352 792 PANTHER PTHR31273:SF0 1 792 0.0 T 22-04-2016 SCD_RS03505 9ccf6b703c14df3418509ae398a47352 792 PIRSF PIRSF017245 1 792 0.0 T 22-04-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 SCD_RS03505 9ccf6b703c14df3418509ae398a47352 792 SUPERFAMILY SSF52518 379 595 2.94E-26 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS03505 9ccf6b703c14df3418509ae398a47352 792 PANTHER PTHR31273 1 792 0.0 T 22-04-2016 SCD_RS03505 9ccf6b703c14df3418509ae398a47352 792 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 403 578 4.0E-88 T 22-04-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 SCD_RS03505 9ccf6b703c14df3418509ae398a47352 792 Pfam PF09363 XFP C-terminal domain 589 790 2.6E-94 T 22-04-2016 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 SCD_RS11000 3b66a9fae7350e15c786b4150caaf6c8 320 PANTHER PTHR30472:SF3 1 319 8.5E-85 T 22-04-2016 SCD_RS11000 3b66a9fae7350e15c786b4150caaf6c8 320 SUPERFAMILY SSF81345 4 318 4.58E-69 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SCD_RS11000 3b66a9fae7350e15c786b4150caaf6c8 320 PANTHER PTHR30472 1 319 8.5E-85 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SCD_RS11000 3b66a9fae7350e15c786b4150caaf6c8 320 Gene3D G3DSA:1.10.3470.10 4 319 3.6E-91 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SCD_RS11000 3b66a9fae7350e15c786b4150caaf6c8 320 Pfam PF01032 FecCD transport family 15 318 4.7E-81 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SCD_RS06510 ae96c44503640749b7d3eac2bcf6e6fd 484 Gene3D G3DSA:3.40.50.150 409 432 6.0E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS06510 ae96c44503640749b7d3eac2bcf6e6fd 484 Gene3D G3DSA:3.40.50.150 238 367 6.0E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS06510 ae96c44503640749b7d3eac2bcf6e6fd 484 SUPERFAMILY SSF53335 238 441 1.19E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS06510 ae96c44503640749b7d3eac2bcf6e6fd 484 Pfam PF13847 Methyltransferase domain 244 347 3.3E-16 T 22-04-2016 IPR025714 Methyltransferase domain SCD_RS06510 ae96c44503640749b7d3eac2bcf6e6fd 484 PANTHER PTHR10108 390 464 2.6E-18 T 22-04-2016 SCD_RS06510 ae96c44503640749b7d3eac2bcf6e6fd 484 PANTHER PTHR10108 244 352 2.6E-18 T 22-04-2016 SCD_RS02035 3387fe7d21aae784c49b052f9213abc5 400 Pfam PF02687 FtsX-like permease family 281 393 1.2E-18 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SCD_RS02035 3387fe7d21aae784c49b052f9213abc5 400 Pfam PF12704 MacB-like periplasmic core domain 21 243 4.8E-35 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SCD_RS02035 3387fe7d21aae784c49b052f9213abc5 400 PANTHER PTHR30572:SF7 1 400 2.7E-81 T 22-04-2016 SCD_RS02035 3387fe7d21aae784c49b052f9213abc5 400 PANTHER PTHR30572 1 400 2.7E-81 T 22-04-2016 SCD_RS05030 60c0ed9c777c11afd4a3a8ae7f5a76bb 381 Pfam PF02661 Fic/DOC family 128 233 1.4E-22 T 22-04-2016 IPR003812 Fido domain SCD_RS05030 60c0ed9c777c11afd4a3a8ae7f5a76bb 381 SUPERFAMILY SSF140931 103 297 3.27E-46 T 22-04-2016 IPR003812 Fido domain SCD_RS05030 60c0ed9c777c11afd4a3a8ae7f5a76bb 381 Gene3D G3DSA:1.10.3290.10 46 293 2.9E-58 T 22-04-2016 IPR003812 Fido domain SCD_RS05030 60c0ed9c777c11afd4a3a8ae7f5a76bb 381 PIRSF PIRSF038925 12 381 6.5E-100 T 22-04-2016 IPR026287 Adenosine monophosphate-protein transferase SCD_RS05030 60c0ed9c777c11afd4a3a8ae7f5a76bb 381 Pfam PF13784 Fic/DOC family N-terminal 43 115 4.5E-20 T 22-04-2016 IPR025758 Fic/DOC N-terminal SCD_RS05030 60c0ed9c777c11afd4a3a8ae7f5a76bb 381 PANTHER PTHR13504 18 379 6.7E-97 T 22-04-2016 SCD_RS05030 60c0ed9c777c11afd4a3a8ae7f5a76bb 381 PANTHER PTHR13504:SF32 18 379 6.7E-97 T 22-04-2016 SCD_RS04025 e0753223b8fa770d1b02c5ae2d30f037 142 PANTHER PTHR38767 2 140 2.5E-24 T 22-04-2016 SCD_RS04025 e0753223b8fa770d1b02c5ae2d30f037 142 Gene3D G3DSA:3.40.50.10110 1 137 4.1E-40 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 SCD_RS04025 e0753223b8fa770d1b02c5ae2d30f037 142 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 132 5.2E-38 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 SCD_RS04025 e0753223b8fa770d1b02c5ae2d30f037 142 SUPERFAMILY SSF102400 1 137 1.83E-40 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 SCD_RS08945 448fab13ebe31d565f1a60ad339aa118 211 Gene3D G3DSA:1.25.40.10 65 189 1.5E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS08945 448fab13ebe31d565f1a60ad339aa118 211 SUPERFAMILY SSF48452 89 192 5.52E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS08945 448fab13ebe31d565f1a60ad339aa118 211 PIRSF PIRSF006170 1 210 4.5E-61 T 22-04-2016 IPR026039 Uncharacterised protein family UPF0070 SCD_RS08945 448fab13ebe31d565f1a60ad339aa118 211 PANTHER PTHR38035 2 209 6.8E-40 T 22-04-2016 SCD_RS08945 448fab13ebe31d565f1a60ad339aa118 211 Pfam PF09976 Tetratricopeptide repeat-like domain 15 208 7.2E-67 T 22-04-2016 IPR018704 Tetratricopeptide repeat-like domain SCD_RS01725 bfd9ed903842f90581196d4a2d6a671e 765 PANTHER PTHR22888:SF3 573 684 5.1E-22 T 22-04-2016 SCD_RS01725 bfd9ed903842f90581196d4a2d6a671e 765 Gene3D G3DSA:2.60.40.420 539 643 1.1E-34 T 22-04-2016 IPR008972 Cupredoxin SCD_RS01725 bfd9ed903842f90581196d4a2d6a671e 765 SUPERFAMILY SSF50974 51 517 8.5E-91 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal SCD_RS01725 bfd9ed903842f90581196d4a2d6a671e 765 PANTHER PTHR22888 573 684 5.1E-22 T 22-04-2016 SCD_RS01725 bfd9ed903842f90581196d4a2d6a671e 765 TIGRFAM TIGR04246 nitrous_NosZ_Gp: nitrous-oxide reductase, Sec-dependent 48 645 5.4E-274 T 22-04-2016 IPR026468 Nitrous-oxide reductase, Sec-dependent SCD_RS01725 bfd9ed903842f90581196d4a2d6a671e 765 Gene3D G3DSA:2.130.10.10 98 526 9.8E-117 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SCD_RS01725 bfd9ed903842f90581196d4a2d6a671e 765 SUPERFAMILY SSF49503 479 647 9.13E-25 T 22-04-2016 IPR008972 Cupredoxin SCD_RS01725 bfd9ed903842f90581196d4a2d6a671e 765 Pfam PF13473 Cupredoxin-like domain 560 642 2.6E-7 T 22-04-2016 IPR028096 EfeO-type cupredoxin-like domain SCD_RS10695 2f3d57044e049177f42008287237025e 188 Gene3D G3DSA:2.40.128.110 20 187 1.6E-54 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SCD_RS10695 2f3d57044e049177f42008287237025e 188 Pfam PF04264 YceI-like domain 24 185 6.0E-40 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SCD_RS10695 2f3d57044e049177f42008287237025e 188 SUPERFAMILY SSF101874 23 187 1.07E-53 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SCD_RS10695 2f3d57044e049177f42008287237025e 188 PANTHER PTHR34406:SF1 5 187 1.6E-46 T 22-04-2016 SCD_RS10695 2f3d57044e049177f42008287237025e 188 SMART SM00867 23 186 1.8E-64 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SCD_RS10695 2f3d57044e049177f42008287237025e 188 PANTHER PTHR34406 5 187 1.6E-46 T 22-04-2016 SCD_RS13725 6fb700c2733e3dbbf2f7ac007a7c6bf5 255 SUPERFAMILY SSF55729 19 226 2.13E-45 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS13725 6fb700c2733e3dbbf2f7ac007a7c6bf5 255 PANTHER PTHR37323 1 255 4.6E-80 T 22-04-2016 SCD_RS13725 6fb700c2733e3dbbf2f7ac007a7c6bf5 255 Pfam PF13444 Acetyltransferase (GNAT) domain 34 135 1.1E-35 T 22-04-2016 SCD_RS13725 6fb700c2733e3dbbf2f7ac007a7c6bf5 255 PANTHER PTHR37323:SF1 1 255 4.6E-80 T 22-04-2016 SCD_RS13725 6fb700c2733e3dbbf2f7ac007a7c6bf5 255 Gene3D G3DSA:3.40.630.30 19 220 7.4E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS09460 73601509d517d010e73b45bcdfe55eca 214 Pfam PF02310 B12 binding domain 92 194 3.5E-16 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SCD_RS09460 73601509d517d010e73b45bcdfe55eca 214 Gene3D G3DSA:3.40.50.280 89 210 8.5E-34 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SCD_RS09460 73601509d517d010e73b45bcdfe55eca 214 SUPERFAMILY SSF52242 73 209 2.09E-29 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SCD_RS06260 312f1bab0d47c09435a0755e91bd4395 380 SUPERFAMILY SSF160544 244 351 1.83E-40 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal SCD_RS06260 312f1bab0d47c09435a0755e91bd4395 380 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 1.9E-36 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SCD_RS06260 312f1bab0d47c09435a0755e91bd4395 380 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 1.9E-36 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SCD_RS06260 312f1bab0d47c09435a0755e91bd4395 380 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 1.9E-36 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SCD_RS06260 312f1bab0d47c09435a0755e91bd4395 380 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 1.9E-36 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SCD_RS06260 312f1bab0d47c09435a0755e91bd4395 380 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 1.9E-36 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SCD_RS06260 312f1bab0d47c09435a0755e91bd4395 380 PANTHER PTHR30531 1 361 2.5E-150 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SCD_RS06260 312f1bab0d47c09435a0755e91bd4395 380 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 347 7.3E-124 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SCD_RS06260 312f1bab0d47c09435a0755e91bd4395 380 PANTHER PTHR30531:SF4 1 361 2.5E-150 T 22-04-2016 SCD_RS06260 312f1bab0d47c09435a0755e91bd4395 380 Gene3D G3DSA:3.40.1690.10 218 356 4.7E-61 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal SCD_RS06260 312f1bab0d47c09435a0755e91bd4395 380 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 352 2.4E-122 T 22-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 SCD_RS06925 569cc4a11d5037b88052aa7ba5a23242 121 Pfam PF16137 Domain of unknown function (DUF4845) 28 112 2.1E-25 T 22-04-2016 IPR032314 Protein of unknown function DUF4845 SCD_RS04390 5e25622f0b3db3f51ca1dc3051a7640b 70 SUPERFAMILY SSF143100 3 65 1.7E-21 T 22-04-2016 SCD_RS04390 5e25622f0b3db3f51ca1dc3051a7640b 70 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 4 63 1.7E-10 T 22-04-2016 IPR031807 HicB-like antitoxin of toxin-antitoxin system SCD_RS04390 5e25622f0b3db3f51ca1dc3051a7640b 70 PANTHER PTHR34504 1 62 1.3E-14 T 22-04-2016 SCD_RS02875 c42d379f9c21394202ec087f7e78cd71 96 SUPERFAMILY SSF52091 5 91 5.49E-13 T 22-04-2016 IPR002645 STAS domain SCD_RS02875 c42d379f9c21394202ec087f7e78cd71 96 Gene3D G3DSA:3.30.750.24 8 91 2.1E-12 T 22-04-2016 IPR002645 STAS domain SCD_RS02875 c42d379f9c21394202ec087f7e78cd71 96 Pfam PF13466 STAS domain 10 85 9.2E-18 T 22-04-2016 IPR002645 STAS domain SCD_RS05535 2b966db0ebf890744aef7a255fba4c75 245 Gene3D G3DSA:3.40.1210.10 1 244 2.1E-87 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SCD_RS05535 2b966db0ebf890744aef7a255fba4c75 245 Pfam PF01975 Survival protein SurE 3 182 4.8E-58 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SCD_RS05535 2b966db0ebf890744aef7a255fba4c75 245 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 245 38.485 T 22-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SCD_RS05535 2b966db0ebf890744aef7a255fba4c75 245 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 233 2.7E-68 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SCD_RS05535 2b966db0ebf890744aef7a255fba4c75 245 PANTHER PTHR30457 1 245 1.0E-89 T 22-04-2016 SCD_RS05535 2b966db0ebf890744aef7a255fba4c75 245 SUPERFAMILY SSF64167 1 245 8.24E-86 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SCD_RS01270 2f2cf3ed40a710f9a79d257abec61ab3 298 Gene3D G3DSA:3.40.1350.10 12 105 6.7E-6 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 SCD_RS03820 5b3cbb79dadbc834a18868357e417163 289 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 44 253 5.1E-90 T 22-04-2016 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 SCD_RS03820 5b3cbb79dadbc834a18868357e417163 289 PANTHER PTHR30134:SF2 7 269 1.4E-130 T 22-04-2016 SCD_RS03820 5b3cbb79dadbc834a18868357e417163 289 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 73 233 2.5E-35 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain SCD_RS03820 5b3cbb79dadbc834a18868357e417163 289 Gene3D G3DSA:3.40.50.300 80 237 1.9E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03820 5b3cbb79dadbc834a18868357e417163 289 SUPERFAMILY SSF52540 38 261 3.63E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03820 5b3cbb79dadbc834a18868357e417163 289 PANTHER PTHR30134 7 269 1.4E-130 T 22-04-2016 SCD_RS12935 4eed62f50d6bcc3be8e25721f4c4cf7b 222 Pfam PF01625 Peptide methionine sulfoxide reductase 43 195 1.9E-58 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SCD_RS12935 4eed62f50d6bcc3be8e25721f4c4cf7b 222 PANTHER PTHR10173:SF29 33 198 2.7E-81 T 22-04-2016 SCD_RS12935 4eed62f50d6bcc3be8e25721f4c4cf7b 222 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 41 201 34.528 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SCD_RS12935 4eed62f50d6bcc3be8e25721f4c4cf7b 222 PANTHER PTHR10173 33 198 2.7E-81 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SCD_RS12935 4eed62f50d6bcc3be8e25721f4c4cf7b 222 SUPERFAMILY SSF55068 17 207 1.29E-67 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SCD_RS12935 4eed62f50d6bcc3be8e25721f4c4cf7b 222 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 43 192 1.6E-52 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SCD_RS12935 4eed62f50d6bcc3be8e25721f4c4cf7b 222 Gene3D G3DSA:3.30.1060.10 33 195 1.8E-67 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SCD_RS04720 8037be4cfa71f35e2568575449489ebf 94 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 2 89 7.8E-23 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SCD_RS04720 8037be4cfa71f35e2568575449489ebf 94 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 1 94 17.239 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SCD_RS04720 8037be4cfa71f35e2568575449489ebf 94 PANTHER PTHR11434 1 94 9.9E-36 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SCD_RS08715 59d3b7a12ffc423eea3e2c9f3017336c 369 PANTHER PTHR30352 9 349 1.4E-161 T 22-04-2016 SCD_RS08715 59d3b7a12ffc423eea3e2c9f3017336c 369 PANTHER PTHR30352:SF5 9 349 1.4E-161 T 22-04-2016 SCD_RS08715 59d3b7a12ffc423eea3e2c9f3017336c 369 Pfam PF04055 Radical SAM superfamily 89 240 3.6E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SCD_RS08715 59d3b7a12ffc423eea3e2c9f3017336c 369 Pfam PF13353 4Fe-4S single cluster domain 80 184 1.5E-6 T 22-04-2016 SCD_RS08715 59d3b7a12ffc423eea3e2c9f3017336c 369 PIRSF PIRSF004869 5 322 1.3E-94 T 22-04-2016 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted SCD_RS08715 59d3b7a12ffc423eea3e2c9f3017336c 369 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 14 361 2.6E-197 T 22-04-2016 IPR027596 AmmeMemoRadiSam system radical SAM enzyme SCD_RS08715 59d3b7a12ffc423eea3e2c9f3017336c 369 SUPERFAMILY SSF102114 54 324 1.22E-42 T 22-04-2016 SCD_RS08715 59d3b7a12ffc423eea3e2c9f3017336c 369 Gene3D G3DSA:3.80.30.10 131 295 7.9E-35 T 22-04-2016 SCD_RS07405 da0b9c861f8d708418336969189f9edf 116 PIRSF PIRSF000169 1 115 8.3E-43 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 SCD_RS07405 da0b9c861f8d708418336969189f9edf 116 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 9 100 9.6E-13 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 SCD_RS07405 da0b9c861f8d708418336969189f9edf 116 Gene3D G3DSA:1.20.1300.10 1 114 9.7E-37 T 22-04-2016 SCD_RS07405 da0b9c861f8d708418336969189f9edf 116 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 9 113 6.1E-38 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 SCD_RS07405 da0b9c861f8d708418336969189f9edf 116 PANTHER PTHR38689:SF1 2 115 1.5E-30 T 22-04-2016 SCD_RS07405 da0b9c861f8d708418336969189f9edf 116 SUPERFAMILY SSF81343 4 115 1.0E-29 T 22-04-2016 SCD_RS07405 da0b9c861f8d708418336969189f9edf 116 PANTHER PTHR38689 2 115 1.5E-30 T 22-04-2016 SCD_RS15495 a8c4363d855f8cf5e658a840d06c1d6f 362 Pfam PF06527 TniQ 26 166 7.2E-31 T 22-04-2016 IPR009492 TniQ SCD_RS12270 d6956d9e6db0d903f11d4b8b200a828f 295 SUPERFAMILY SSF52440 1 90 5.28E-27 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SCD_RS12270 d6956d9e6db0d903f11d4b8b200a828f 295 Gene3D G3DSA:3.30.1490.20 100 167 1.3E-23 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SCD_RS12270 d6956d9e6db0d903f11d4b8b200a828f 295 Gene3D G3DSA:3.40.50.20 1 78 3.4E-25 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SCD_RS12270 d6956d9e6db0d903f11d4b8b200a828f 295 Pfam PF07478 D-ala D-ala ligase C-terminus 97 289 1.6E-60 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS12270 d6956d9e6db0d903f11d4b8b200a828f 295 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 235 263 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS12270 d6956d9e6db0d903f11d4b8b200a828f 295 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 1 293 33.79 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS12270 d6956d9e6db0d903f11d4b8b200a828f 295 PIRSF PIRSF039102 31 295 4.6E-86 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS12270 d6956d9e6db0d903f11d4b8b200a828f 295 SUPERFAMILY SSF56059 90 292 1.4E-56 T 22-04-2016 SCD_RS12270 d6956d9e6db0d903f11d4b8b200a828f 295 Gene3D G3DSA:3.30.470.20 79 97 7.2E-49 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SCD_RS12270 d6956d9e6db0d903f11d4b8b200a828f 295 Gene3D G3DSA:3.30.470.20 168 292 7.2E-49 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SCD_RS12270 d6956d9e6db0d903f11d4b8b200a828f 295 Pfam PF01820 D-ala D-ala ligase N-terminus 1 80 2.4E-18 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS12270 d6956d9e6db0d903f11d4b8b200a828f 295 PANTHER PTHR23132 1 292 9.4E-88 T 22-04-2016 SCD_RS12270 d6956d9e6db0d903f11d4b8b200a828f 295 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 1 292 5.7E-102 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS12270 d6956d9e6db0d903f11d4b8b200a828f 295 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 57 68 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS06300 079f9986d18d56f6fb1e75493a27ff08 107 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 2 99 9.3E-22 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 SCD_RS06300 079f9986d18d56f6fb1e75493a27ff08 107 Pfam PF04316 Anti-sigma-28 factor, FlgM 42 95 3.8E-13 T 22-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal SCD_RS06300 079f9986d18d56f6fb1e75493a27ff08 107 SUPERFAMILY SSF101498 28 98 3.14E-15 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 SCD_RS14845 7b43fb241be3b3e6da9a83d4cc8e36ba 407 Pfam PF12704 MacB-like periplasmic core domain 19 236 3.6E-13 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SCD_RS14845 7b43fb241be3b3e6da9a83d4cc8e36ba 407 PANTHER PTHR30489 1 406 5.4E-44 T 22-04-2016 SCD_RS14845 7b43fb241be3b3e6da9a83d4cc8e36ba 407 Pfam PF02687 FtsX-like permease family 276 398 4.5E-21 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SCD_RS10225 f439c68cdd45d7717336cfe8a148b95e 90 Gene3D G3DSA:3.30.370.10 8 88 2.3E-23 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) SCD_RS10225 f439c68cdd45d7717336cfe8a148b95e 90 SUPERFAMILY SSF52038 4 87 2.49E-20 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) SCD_RS10225 f439c68cdd45d7717336cfe8a148b95e 90 Pfam PF01337 Barstar (barnase inhibitor) 8 82 6.8E-20 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) SCD_RS02800 2eb9c57822a73af737a4fdd08e7efb0c 217 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 2 27 1.9E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS02800 2eb9c57822a73af737a4fdd08e7efb0c 217 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 7.9E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS02800 2eb9c57822a73af737a4fdd08e7efb0c 217 SUPERFAMILY SSF54523 8 133 2.67E-12 T 22-04-2016 SCD_RS02800 2eb9c57822a73af737a4fdd08e7efb0c 217 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS10925 231aa132af8e8df4ad7255ebe1d105c2 108 SMART SM01323 18 100 1.9E-45 T 22-04-2016 IPR003849 Preprotein translocase YajC SCD_RS10925 231aa132af8e8df4ad7255ebe1d105c2 108 PANTHER PTHR33909 1 108 8.2E-32 T 22-04-2016 SCD_RS10925 231aa132af8e8df4ad7255ebe1d105c2 108 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 100 1.8E-28 T 22-04-2016 IPR003849 Preprotein translocase YajC SCD_RS10925 231aa132af8e8df4ad7255ebe1d105c2 108 PRINTS PR01853 Bacterial YajC preprotein translocase signature 40 58 4.7E-15 T 22-04-2016 IPR003849 Preprotein translocase YajC SCD_RS10925 231aa132af8e8df4ad7255ebe1d105c2 108 PRINTS PR01853 Bacterial YajC preprotein translocase signature 20 40 4.7E-15 T 22-04-2016 IPR003849 Preprotein translocase YajC SCD_RS10925 231aa132af8e8df4ad7255ebe1d105c2 108 Pfam PF02699 Preprotein translocase subunit 22 97 9.9E-30 T 22-04-2016 IPR003849 Preprotein translocase YajC SCD_RS10925 231aa132af8e8df4ad7255ebe1d105c2 108 PANTHER PTHR33909:SF1 1 108 8.2E-32 T 22-04-2016 SCD_RS08415 d43f15e0429cd6bb1d7457d9dfcfd4af 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 3.2E-26 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SCD_RS08415 d43f15e0429cd6bb1d7457d9dfcfd4af 260 PANTHER PTHR30435:SF19 1 260 1.2E-136 T 22-04-2016 SCD_RS08415 d43f15e0429cd6bb1d7457d9dfcfd4af 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site SCD_RS08415 d43f15e0429cd6bb1d7457d9dfcfd4af 260 SUPERFAMILY SSF117143 93 222 1.29E-35 T 22-04-2016 SCD_RS08415 d43f15e0429cd6bb1d7457d9dfcfd4af 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 1.2E-119 T 22-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 SCD_RS08415 d43f15e0429cd6bb1d7457d9dfcfd4af 260 PANTHER PTHR30435 1 260 1.2E-136 T 22-04-2016 SCD_RS08415 d43f15e0429cd6bb1d7457d9dfcfd4af 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 1.1E-48 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SCD_RS08415 d43f15e0429cd6bb1d7457d9dfcfd4af 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 145 243 6.5E-32 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SCD_RS08415 d43f15e0429cd6bb1d7457d9dfcfd4af 260 Pfam PF00460 Flagella basal body rod protein 5 35 2.6E-13 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SCD_RS10485 18ec45ad6eecf05e1e0243b15855852f 205 Pfam PF01464 Transglycosylase SLT domain 84 174 1.0E-16 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 SCD_RS10485 18ec45ad6eecf05e1e0243b15855852f 205 PANTHER PTHR21666 56 175 2.0E-17 T 22-04-2016 SCD_RS10485 18ec45ad6eecf05e1e0243b15855852f 205 Gene3D G3DSA:1.10.530.10 75 175 6.5E-26 T 22-04-2016 SCD_RS10485 18ec45ad6eecf05e1e0243b15855852f 205 SUPERFAMILY SSF53955 71 176 6.88E-29 T 22-04-2016 IPR023346 Lysozyme-like domain SCD_RS08260 44023bf9415146b4c6faa44058816dba 142 SUPERFAMILY SSF88723 1 135 1.64E-15 T 22-04-2016 IPR029060 PIN domain-like SCD_RS08260 44023bf9415146b4c6faa44058816dba 142 Gene3D G3DSA:3.40.50.1010 1 132 1.4E-10 T 22-04-2016 IPR029060 PIN domain-like SCD_RS08260 44023bf9415146b4c6faa44058816dba 142 Pfam PF01850 PIN domain 3 131 1.0E-10 T 22-04-2016 IPR002716 PIN domain SCD_RS11195 8c08501856bb3e463cc557a486086510 263 Pfam PF00005 ABC transporter 24 166 1.7E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS11195 8c08501856bb3e463cc557a486086510 263 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 24 254 1.0E-105 T 22-04-2016 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 SCD_RS11195 8c08501856bb3e463cc557a486086510 263 SMART SM00382 33 216 1.0E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS11195 8c08501856bb3e463cc557a486086510 263 PANTHER PTHR24220 6 258 4.1E-121 T 22-04-2016 SCD_RS11195 8c08501856bb3e463cc557a486086510 263 Gene3D G3DSA:3.40.50.300 4 222 7.6E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11195 8c08501856bb3e463cc557a486086510 263 PANTHER PTHR24220:SF361 6 258 4.1E-121 T 22-04-2016 SCD_RS11195 8c08501856bb3e463cc557a486086510 263 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS11195 8c08501856bb3e463cc557a486086510 263 SUPERFAMILY SSF52540 5 226 1.1E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03280 1238b34c572e6b3324c80811177c126c 73 Pfam PF03692 Putative zinc- or iron-chelating domain 23 56 6.3E-8 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein SCD_RS06585 f03cbc49e9189474722e4102343f3729 429 Pfam PF10082 Putative beta-barrel porin 2 323 419 5.4E-6 T 22-04-2016 IPR018759 Putative beta-barrel porin 2 SCD_RS06585 f03cbc49e9189474722e4102343f3729 429 Gene3D G3DSA:2.40.170.20 179 415 6.0E-11 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SCD_RS06585 f03cbc49e9189474722e4102343f3729 429 SUPERFAMILY SSF56935 131 297 7.61E-12 T 22-04-2016 SCD_RS06585 f03cbc49e9189474722e4102343f3729 429 SUPERFAMILY SSF56935 330 421 7.61E-12 T 22-04-2016 SCD_RS05225 3f3f5c761f65baa4578b3a4d183b9999 219 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 193 217 0.0018 T 22-04-2016 IPR013424 PEP-CTERM protein-sorting domain SCD_RS05225 3f3f5c761f65baa4578b3a4d183b9999 219 TIGRFAM TIGR03370 VPLPA-CTERM: VPLPA-CTERM protein sorting domain 193 217 2.1E-7 T 22-04-2016 IPR022472 VPLPA-CTERM protein sorting domain SCD_RS15630 211533196e7ba5e5dfa9bdd74caec586 645 SUPERFAMILY SSF55781 324 477 4.66E-9 T 22-04-2016 IPR029016 GAF domain-like SCD_RS15630 211533196e7ba5e5dfa9bdd74caec586 645 Gene3D G3DSA:3.30.70.270 484 642 3.9E-52 T 22-04-2016 SCD_RS15630 211533196e7ba5e5dfa9bdd74caec586 645 SUPERFAMILY SSF55073 487 642 4.0E-47 T 22-04-2016 IPR029787 Nucleotide cyclase SCD_RS15630 211533196e7ba5e5dfa9bdd74caec586 645 SMART SM00267 471 644 4.6E-62 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15630 211533196e7ba5e5dfa9bdd74caec586 645 Pfam PF00990 Diguanylate cyclase, GGDEF domain 482 640 1.1E-47 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15630 211533196e7ba5e5dfa9bdd74caec586 645 Gene3D G3DSA:3.30.450.40 322 482 2.1E-7 T 22-04-2016 IPR029016 GAF domain-like SCD_RS15630 211533196e7ba5e5dfa9bdd74caec586 645 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 478 643 2.5E-54 T 22-04-2016 IPR000160 GGDEF domain SCD_RS15630 211533196e7ba5e5dfa9bdd74caec586 645 PANTHER PTHR10799 430 641 8.2E-31 T 22-04-2016 SCD_RS15630 211533196e7ba5e5dfa9bdd74caec586 645 PANTHER PTHR10799:SF750 430 641 8.2E-31 T 22-04-2016 SCD_RS10455 1756badb5783a45278d2cd994d5a2756 159 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 38.294 T 22-04-2016 IPR022927 RNA pyrophosphohydrolase RppH SCD_RS10455 1756badb5783a45278d2cd994d5a2756 159 Gene3D G3DSA:3.90.79.10 7 152 4.5E-31 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SCD_RS10455 1756badb5783a45278d2cd994d5a2756 159 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.3E-7 T 22-04-2016 IPR020476 NUDIX hydrolase SCD_RS10455 1756badb5783a45278d2cd994d5a2756 159 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.3E-7 T 22-04-2016 IPR020476 NUDIX hydrolase SCD_RS10455 1756badb5783a45278d2cd994d5a2756 159 Pfam PF00293 NUDIX domain 7 136 1.6E-24 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SCD_RS10455 1756badb5783a45278d2cd994d5a2756 159 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SCD_RS10455 1756badb5783a45278d2cd994d5a2756 159 SUPERFAMILY SSF55811 3 157 6.23E-31 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SCD_RS10455 1756badb5783a45278d2cd994d5a2756 159 PANTHER PTHR23114 1 152 5.6E-44 T 22-04-2016 SCD_RS06635 91cfa5c3bdd0ae5ae06a79438bed2d7b 739 SUPERFAMILY SSF51126 79 248 1.19E-9 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor SCD_RS06635 91cfa5c3bdd0ae5ae06a79438bed2d7b 739 SUPERFAMILY SSF51126 410 642 9.87E-9 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor SCD_RS11315 53bdee1f338cdd75086ad0bb665f6c52 277 Pfam PF08668 HDOD domain 11 207 6.9E-58 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS11315 53bdee1f338cdd75086ad0bb665f6c52 277 TIGRFAM TIGR00277 HDIG: HDIG domain 107 204 5.7E-12 T 22-04-2016 IPR006675 HDIG domain SCD_RS11315 53bdee1f338cdd75086ad0bb665f6c52 277 Gene3D G3DSA:1.10.3150.10 3 263 1.7E-74 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS11315 53bdee1f338cdd75086ad0bb665f6c52 277 PANTHER PTHR33525:SF3 3 252 5.1E-51 T 22-04-2016 SCD_RS11315 53bdee1f338cdd75086ad0bb665f6c52 277 PANTHER PTHR33525 3 252 5.1E-51 T 22-04-2016 SCD_RS11315 53bdee1f338cdd75086ad0bb665f6c52 277 SUPERFAMILY SSF109604 3 263 1.26E-67 T 22-04-2016 SCD_RS06305 e9d753ba3382b0240f761ee6cb5d19e8 153 SUPERFAMILY SSF54690 3 148 1.57E-52 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 SCD_RS06305 e9d753ba3382b0240f761ee6cb5d19e8 153 Gene3D G3DSA:3.90.1170.40 3 148 2.6E-56 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 SCD_RS06305 e9d753ba3382b0240f761ee6cb5d19e8 153 Pfam PF02391 MoaE protein 5 119 1.4E-37 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 SCD_RS06305 e9d753ba3382b0240f761ee6cb5d19e8 153 PANTHER PTHR23404:SF2 24 148 1.2E-39 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 SCD_RS06305 e9d753ba3382b0240f761ee6cb5d19e8 153 PANTHER PTHR23404 24 148 1.2E-39 T 22-04-2016 SCD_RS02805 66e566a26be749aa314e50d6353e7f6c 224 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 1.5E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS02805 66e566a26be749aa314e50d6353e7f6c 224 SUPERFAMILY SSF54523 7 142 1.33E-9 T 22-04-2016 SCD_RS14895 db034b674dc980040ddf4e2dd6f5e6bc 355 PANTHER PTHR21091:SF2 1 351 1.8E-147 T 22-04-2016 SCD_RS14895 db034b674dc980040ddf4e2dd6f5e6bc 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 143 159 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SCD_RS14895 db034b674dc980040ddf4e2dd6f5e6bc 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 23 32 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SCD_RS14895 db034b674dc980040ddf4e2dd6f5e6bc 355 SUPERFAMILY SSF51726 4 353 2.44E-119 T 22-04-2016 SCD_RS14895 db034b674dc980040ddf4e2dd6f5e6bc 355 Gene3D G3DSA:3.20.20.210 3 352 8.3E-149 T 22-04-2016 SCD_RS14895 db034b674dc980040ddf4e2dd6f5e6bc 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 7 350 49.325 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SCD_RS14895 db034b674dc980040ddf4e2dd6f5e6bc 355 PANTHER PTHR21091 1 351 1.8E-147 T 22-04-2016 SCD_RS14895 db034b674dc980040ddf4e2dd6f5e6bc 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 10 348 7.8E-128 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SCD_RS14895 db034b674dc980040ddf4e2dd6f5e6bc 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 6 348 5.6E-134 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SCD_RS01615 968127bea9b09299af60cdb45a258c12 617 ProSitePatterns PS00211 ABC transporters family signature. 429 443 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS01615 968127bea9b09299af60cdb45a258c12 617 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS01615 968127bea9b09299af60cdb45a258c12 617 PANTHER PTHR19211 1 554 1.2E-260 T 22-04-2016 SCD_RS01615 968127bea9b09299af60cdb45a258c12 617 SUPERFAMILY SSF52540 2 251 7.44E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS01615 968127bea9b09299af60cdb45a258c12 617 Pfam PF00005 ABC transporter 18 175 5.8E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS01615 968127bea9b09299af60cdb45a258c12 617 Pfam PF00005 ABC transporter 327 457 4.4E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS01615 968127bea9b09299af60cdb45a258c12 617 Pfam PF12848 ABC transporter 215 290 3.8E-25 T 22-04-2016 IPR032781 ABC-transporter extension domain SCD_RS01615 968127bea9b09299af60cdb45a258c12 617 SUPERFAMILY SSF52540 303 515 6.96E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS01615 968127bea9b09299af60cdb45a258c12 617 Gene3D G3DSA:3.40.50.300 1 262 4.4E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS01615 968127bea9b09299af60cdb45a258c12 617 Gene3D G3DSA:3.40.50.300 310 532 1.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS01615 968127bea9b09299af60cdb45a258c12 617 SMART SM00382 335 502 2.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS01615 968127bea9b09299af60cdb45a258c12 617 SMART SM00382 26 227 4.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS01615 968127bea9b09299af60cdb45a258c12 617 PANTHER PTHR19211:SF49 1 554 1.2E-260 T 22-04-2016 SCD_RS11175 e03755fde1091d07abe72613a7aeb059 201 Pfam PF00072 Response regulator receiver domain 14 120 3.6E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS11175 e03755fde1091d07abe72613a7aeb059 201 SMART SM01012 139 194 5.5E-23 T 22-04-2016 IPR005561 ANTAR domain GO:0003723 SCD_RS11175 e03755fde1091d07abe72613a7aeb059 201 PANTHER PTHR26402:SF567 12 193 9.9E-54 T 22-04-2016 SCD_RS11175 e03755fde1091d07abe72613a7aeb059 201 PIRSF PIRSF036382 4 201 4.0E-64 T 22-04-2016 IPR008327 Signal transduction response regulator, antiterminator SCD_RS11175 e03755fde1091d07abe72613a7aeb059 201 Pfam PF03861 ANTAR domain 142 194 5.0E-19 T 22-04-2016 IPR005561 ANTAR domain GO:0003723 SCD_RS11175 e03755fde1091d07abe72613a7aeb059 201 SUPERFAMILY SSF52172 7 194 7.97E-51 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS11175 e03755fde1091d07abe72613a7aeb059 201 PANTHER PTHR26402 12 193 9.9E-54 T 22-04-2016 SCD_RS11175 e03755fde1091d07abe72613a7aeb059 201 Gene3D G3DSA:1.10.10.10 142 200 6.2E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS11175 e03755fde1091d07abe72613a7aeb059 201 SMART SM00448 12 123 2.5E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS11175 e03755fde1091d07abe72613a7aeb059 201 Gene3D G3DSA:3.40.50.2300 8 132 5.6E-20 T 22-04-2016 SCD_RS11980 9eca24ecd8ce9f2d21da4b2e1dc5b125 285 PANTHER PTHR33490 5 260 4.9E-59 T 22-04-2016 SCD_RS11980 9eca24ecd8ce9f2d21da4b2e1dc5b125 285 SMART SM00460 172 235 1.4E-21 T 22-04-2016 IPR002931 Transglutaminase-like SCD_RS11980 9eca24ecd8ce9f2d21da4b2e1dc5b125 285 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 82 1.1E-19 T 22-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal SCD_RS11980 9eca24ecd8ce9f2d21da4b2e1dc5b125 285 Gene3D G3DSA:3.90.260.10 123 245 4.0E-12 T 22-04-2016 IPR002931 Transglutaminase-like SCD_RS11980 9eca24ecd8ce9f2d21da4b2e1dc5b125 285 SUPERFAMILY SSF54001 7 262 3.22E-42 T 22-04-2016 SCD_RS11980 9eca24ecd8ce9f2d21da4b2e1dc5b125 285 PANTHER PTHR33490:SF1 5 260 4.9E-59 T 22-04-2016 SCD_RS11980 9eca24ecd8ce9f2d21da4b2e1dc5b125 285 Pfam PF01841 Transglutaminase-like superfamily 128 233 3.3E-20 T 22-04-2016 IPR002931 Transglutaminase-like SCD_RS13035 7f4848bda54ee9fa2848bbe194c9f61d 187 Pfam PF03602 Conserved hypothetical protein 95 7 177 3.7E-53 T 22-04-2016 SCD_RS13035 7f4848bda54ee9fa2848bbe194c9f61d 187 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 5 179 4.6E-49 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SCD_RS13035 7f4848bda54ee9fa2848bbe194c9f61d 187 SUPERFAMILY SSF53335 7 177 2.67E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS13035 7f4848bda54ee9fa2848bbe194c9f61d 187 PIRSF PIRSF004553 6 181 3.9E-49 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SCD_RS13035 7f4848bda54ee9fa2848bbe194c9f61d 187 PANTHER PTHR18895 3 182 3.5E-39 T 22-04-2016 SCD_RS13035 7f4848bda54ee9fa2848bbe194c9f61d 187 PANTHER PTHR18895:SF60 3 182 3.5E-39 T 22-04-2016 SCD_RS13035 7f4848bda54ee9fa2848bbe194c9f61d 187 Gene3D G3DSA:3.40.50.150 4 182 8.0E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS13035 7f4848bda54ee9fa2848bbe194c9f61d 187 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 119 125 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SCD_RS02885 fa35f73d42ef0332e6564fc81f4e5a82 251 PANTHER PTHR30413:SF2 1 251 5.1E-61 T 22-04-2016 SCD_RS02885 fa35f73d42ef0332e6564fc81f4e5a82 251 Pfam PF01061 ABC-2 type transporter 4 214 1.4E-34 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 SCD_RS02885 fa35f73d42ef0332e6564fc81f4e5a82 251 PIRSF PIRSF006648 2 248 4.0E-21 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SCD_RS02885 fa35f73d42ef0332e6564fc81f4e5a82 251 PANTHER PTHR30413 1 251 5.1E-61 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SCD_RS02885 fa35f73d42ef0332e6564fc81f4e5a82 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 171 190 5.4E-12 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SCD_RS02885 fa35f73d42ef0332e6564fc81f4e5a82 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 191 210 5.4E-12 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SCD_RS02885 fa35f73d42ef0332e6564fc81f4e5a82 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 53 75 5.4E-12 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SCD_RS02885 fa35f73d42ef0332e6564fc81f4e5a82 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 133 157 5.4E-12 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SCD_RS04660 71e745b096792c44f5f29a96835ba4e7 122 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 4.3E-27 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SCD_RS04660 71e745b096792c44f5f29a96835ba4e7 122 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 1.0E-38 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SCD_RS04660 71e745b096792c44f5f29a96835ba4e7 122 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.0E-38 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SCD_RS04660 71e745b096792c44f5f29a96835ba4e7 122 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 1.0E-38 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SCD_RS04660 71e745b096792c44f5f29a96835ba4e7 122 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 1.0E-38 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SCD_RS04660 71e745b096792c44f5f29a96835ba4e7 122 Pfam PF03840 Preprotein translocase SecG subunit 5 72 8.8E-23 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SCD_RS04660 71e745b096792c44f5f29a96835ba4e7 122 PANTHER PTHR34182 2 110 1.1E-26 T 22-04-2016 SCD_RS11020 ac86ba4e97aa26ea50b430ce4f123d30 1201 Gene3D G3DSA:3.30.70.20 683 796 8.5E-18 T 22-04-2016 SCD_RS11020 ac86ba4e97aa26ea50b430ce4f123d30 1201 Pfam PF10371 Domain of unknown function 636 689 8.2E-23 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 SCD_RS11020 ac86ba4e97aa26ea50b430ce4f123d30 1201 PIRSF PIRSF000159 1 1192 0.0 T 22-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 SCD_RS11020 ac86ba4e97aa26ea50b430ce4f123d30 1201 Gene3D G3DSA:3.40.50.920 260 420 1.9E-63 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SCD_RS11020 ac86ba4e97aa26ea50b430ce4f123d30 1201 Gene3D G3DSA:3.40.50.970 807 1184 2.2E-129 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS11020 ac86ba4e97aa26ea50b430ce4f123d30 1201 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 757 768 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS11020 ac86ba4e97aa26ea50b430ce4f123d30 1201 PANTHER PTHR32154 5 1192 0.0 T 22-04-2016 SCD_RS11020 ac86ba4e97aa26ea50b430ce4f123d30 1201 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 972 1084 6.4E-11 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SCD_RS11020 ac86ba4e97aa26ea50b430ce4f123d30 1201 Gene3D G3DSA:3.40.50.970 5 259 1.5E-110 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS11020 ac86ba4e97aa26ea50b430ce4f123d30 1201 Gene3D G3DSA:4.10.780.10 641 679 1.8E-17 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 SCD_RS11020 ac86ba4e97aa26ea50b430ce4f123d30 1201 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 270 360 7.2E-13 T 22-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II SCD_RS11020 ac86ba4e97aa26ea50b430ce4f123d30 1201 Pfam PF13484 4Fe-4S double cluster binding domain 700 769 1.4E-8 T 22-04-2016 SCD_RS11020 ac86ba4e97aa26ea50b430ce4f123d30 1201 PANTHER PTHR32154:SF0 5 1192 0.0 T 22-04-2016 SCD_RS11020 ac86ba4e97aa26ea50b430ce4f123d30 1201 Gene3D G3DSA:3.40.920.10 428 633 1.0E-75 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SCD_RS11020 ac86ba4e97aa26ea50b430ce4f123d30 1201 SUPERFAMILY SSF53323 427 679 2.62E-75 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SCD_RS11020 ac86ba4e97aa26ea50b430ce4f123d30 1201 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 22 248 2.3E-81 T 22-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 SCD_RS11020 ac86ba4e97aa26ea50b430ce4f123d30 1201 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 6 1183 0.0 T 22-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 SCD_RS11020 ac86ba4e97aa26ea50b430ce4f123d30 1201 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 435 618 2.4E-27 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SCD_RS11020 ac86ba4e97aa26ea50b430ce4f123d30 1201 SUPERFAMILY SSF52518 805 1186 1.12E-116 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS11020 ac86ba4e97aa26ea50b430ce4f123d30 1201 SMART SM00890 633 690 5.6E-27 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 SCD_RS11020 ac86ba4e97aa26ea50b430ce4f123d30 1201 SUPERFAMILY SSF52518 6 259 2.16E-79 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SCD_RS11020 ac86ba4e97aa26ea50b430ce4f123d30 1201 SUPERFAMILY SSF54862 676 849 3.01E-20 T 22-04-2016 SCD_RS11020 ac86ba4e97aa26ea50b430ce4f123d30 1201 SUPERFAMILY SSF52922 260 421 7.38E-44 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SCD_RS12625 1ca4951533d6b6752af8a79bda3bda6e 201 SUPERFAMILY SSF53335 3 182 6.31E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS12625 1ca4951533d6b6752af8a79bda3bda6e 201 Pfam PF13649 Methyltransferase domain 37 130 8.6E-14 T 22-04-2016 SCD_RS12625 1ca4951533d6b6752af8a79bda3bda6e 201 PANTHER PTHR10108 5 170 5.7E-47 T 22-04-2016 SCD_RS12625 1ca4951533d6b6752af8a79bda3bda6e 201 PANTHER PTHR10108:SF838 5 170 5.7E-47 T 22-04-2016 SCD_RS12625 1ca4951533d6b6752af8a79bda3bda6e 201 Gene3D G3DSA:3.40.50.150 3 178 6.3E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS02850 67cbd863ddd5b0b1e4afcd517e97a8b1 466 Pfam PF13401 AAA domain 42 168 5.8E-21 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS02850 67cbd863ddd5b0b1e4afcd517e97a8b1 466 PANTHER PTHR35894:SF1 2 272 9.5E-80 T 22-04-2016 SCD_RS02850 67cbd863ddd5b0b1e4afcd517e97a8b1 466 PANTHER PTHR35894 2 272 9.5E-80 T 22-04-2016 SCD_RS02850 67cbd863ddd5b0b1e4afcd517e97a8b1 466 SUPERFAMILY SSF52540 5 263 1.27E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02850 67cbd863ddd5b0b1e4afcd517e97a8b1 466 Gene3D G3DSA:3.40.50.300 34 182 1.8E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07575 62494a7a85c5de04b42a06658bf22fcf 440 SUPERFAMILY SSF56322 30 437 7.46E-122 T 22-04-2016 IPR005801 ADC synthase GO:0009058 SCD_RS07575 62494a7a85c5de04b42a06658bf22fcf 440 PRINTS PR00095 Anthranilate synthase component I signature 276 289 3.7E-17 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SCD_RS07575 62494a7a85c5de04b42a06658bf22fcf 440 PRINTS PR00095 Anthranilate synthase component I signature 290 303 3.7E-17 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SCD_RS07575 62494a7a85c5de04b42a06658bf22fcf 440 PRINTS PR00095 Anthranilate synthase component I signature 385 399 3.7E-17 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SCD_RS07575 62494a7a85c5de04b42a06658bf22fcf 440 PRINTS PR00095 Anthranilate synthase component I signature 370 384 3.7E-17 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SCD_RS07575 62494a7a85c5de04b42a06658bf22fcf 440 Gene3D G3DSA:3.60.120.10 63 439 3.5E-131 T 22-04-2016 IPR005801 ADC synthase GO:0009058 SCD_RS07575 62494a7a85c5de04b42a06658bf22fcf 440 Pfam PF00425 chorismate binding enzyme 173 428 5.9E-92 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SCD_RS07575 62494a7a85c5de04b42a06658bf22fcf 440 Pfam PF04715 Anthranilate synthase component I, N terminal region 59 135 2.2E-7 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SCD_RS07575 62494a7a85c5de04b42a06658bf22fcf 440 PANTHER PTHR11236 60 440 1.6E-127 T 22-04-2016 SCD_RS11155 6c2410e58470a2424768edc7920da83c 200 Pfam PF13649 Methyltransferase domain 41 135 3.0E-18 T 22-04-2016 SCD_RS11155 6c2410e58470a2424768edc7920da83c 200 Gene3D G3DSA:3.40.50.150 22 192 4.9E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS11155 6c2410e58470a2424768edc7920da83c 200 SUPERFAMILY SSF53335 17 191 2.19E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS11155 6c2410e58470a2424768edc7920da83c 200 PANTHER PTHR10108 14 189 3.4E-25 T 22-04-2016 SCD_RS07505 95eb301915f867aa6c465a40f47bdf85 293 PANTHER PTHR36698:SF2 2 282 3.6E-55 T 22-04-2016 SCD_RS07505 95eb301915f867aa6c465a40f47bdf85 293 PANTHER PTHR36698 2 282 3.6E-55 T 22-04-2016 SCD_RS07505 95eb301915f867aa6c465a40f47bdf85 293 Pfam PF02470 MlaD protein 40 115 9.0E-17 T 22-04-2016 IPR003399 Mce/MlaD SCD_RS11385 c408f33ab11455356e4e5d82c51965e4 281 Gene3D G3DSA:1.25.40.10 37 93 9.6E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS11385 c408f33ab11455356e4e5d82c51965e4 281 SUPERFAMILY SSF48452 36 95 1.35E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS11385 c408f33ab11455356e4e5d82c51965e4 281 Pfam PF14559 Tetratricopeptide repeat 38 92 2.7E-6 T 22-04-2016 SCD_RS10115 058c8dc8435947b7b7b0117aca7c4b79 298 Gene3D G3DSA:3.40.50.1980 40 158 3.8E-33 T 22-04-2016 SCD_RS10115 058c8dc8435947b7b7b0117aca7c4b79 298 SUPERFAMILY SSF53807 19 286 5.89E-66 T 22-04-2016 SCD_RS10115 058c8dc8435947b7b7b0117aca7c4b79 298 PANTHER PTHR30535 9 287 1.9E-55 T 22-04-2016 SCD_RS10115 058c8dc8435947b7b7b0117aca7c4b79 298 Pfam PF01497 Periplasmic binding protein 43 267 7.2E-28 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SCD_RS10115 058c8dc8435947b7b7b0117aca7c4b79 298 Gene3D G3DSA:3.40.50.1980 162 287 2.8E-34 T 22-04-2016 SCD_RS04190 e6477055b44e7fcd585b737dc48e9c03 152 Pfam PF01029 NusB family 16 140 1.3E-33 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SCD_RS04190 e6477055b44e7fcd585b737dc48e9c03 152 Gene3D G3DSA:1.10.940.10 12 145 4.3E-43 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SCD_RS04190 e6477055b44e7fcd585b737dc48e9c03 152 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 13 144 22.004 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 SCD_RS04190 e6477055b44e7fcd585b737dc48e9c03 152 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 14 142 7.3E-43 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 SCD_RS04190 e6477055b44e7fcd585b737dc48e9c03 152 PANTHER PTHR11078 15 147 9.2E-40 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 SCD_RS04190 e6477055b44e7fcd585b737dc48e9c03 152 SUPERFAMILY SSF48013 13 144 1.7E-42 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SCD_RS07230 a1f72a11813af3675256e43bfcd2ce6b 104 SUPERFAMILY SSF54913 1 101 2.33E-26 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SCD_RS07230 a1f72a11813af3675256e43bfcd2ce6b 104 PANTHER PTHR35983 1 85 4.9E-15 T 22-04-2016 SCD_RS07230 a1f72a11813af3675256e43bfcd2ce6b 104 Gene3D G3DSA:3.30.70.120 1 102 5.2E-28 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SCD_RS07230 a1f72a11813af3675256e43bfcd2ce6b 104 Pfam PF02641 Uncharacterized ACR, COG1993 6 85 4.6E-19 T 22-04-2016 IPR003793 Domain of unknown function DUF190 SCD_RS12805 afe70058ffdafb0bb66807f45bef6df6 178 PANTHER PTHR22881 9 168 1.1E-44 T 22-04-2016 SCD_RS12805 afe70058ffdafb0bb66807f45bef6df6 178 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 130 140 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site SCD_RS12805 afe70058ffdafb0bb66807f45bef6df6 178 SUPERFAMILY SSF55486 26 166 3.42E-43 T 22-04-2016 SCD_RS12805 afe70058ffdafb0bb66807f45bef6df6 178 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 24 164 22.739 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SCD_RS12805 afe70058ffdafb0bb66807f45bef6df6 178 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 55 161 6.9E-34 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SCD_RS12805 afe70058ffdafb0bb66807f45bef6df6 178 Gene3D G3DSA:3.40.390.30 35 173 1.7E-46 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 SCD_RS12805 afe70058ffdafb0bb66807f45bef6df6 178 Pfam PF02130 Uncharacterized protein family UPF0054 37 160 4.1E-34 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SCD_RS01810 8e7b133db6a37b0d9d40d1150d77ef70 540 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 35 105 3.2E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01810 8e7b133db6a37b0d9d40d1150d77ef70 540 SUPERFAMILY SSF51004 114 540 8.63E-124 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain SCD_RS01810 8e7b133db6a37b0d9d40d1150d77ef70 540 SUPERFAMILY SSF46626 2 130 3.35E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01810 8e7b133db6a37b0d9d40d1150d77ef70 540 Gene3D G3DSA:2.130.10.10 150 251 1.1E-5 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SCD_RS01810 8e7b133db6a37b0d9d40d1150d77ef70 540 Gene3D G3DSA:1.10.760.10 5 109 1.2E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01810 8e7b133db6a37b0d9d40d1150d77ef70 540 Gene3D G3DSA:2.140.10.20 252 531 7.0E-144 T 22-04-2016 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain SCD_RS01810 8e7b133db6a37b0d9d40d1150d77ef70 540 Pfam PF02239 Cytochrome D1 heme domain 142 535 2.2E-156 T 22-04-2016 SCD_RS06210 14e9cfd968e8ed08055ea3efd292835f 250 Gene3D G3DSA:1.10.3130.10 1 58 5.3E-25 T 22-04-2016 SCD_RS06210 14e9cfd968e8ed08055ea3efd292835f 250 Gene3D G3DSA:2.160.10.10 59 215 1.7E-36 T 22-04-2016 SCD_RS06210 14e9cfd968e8ed08055ea3efd292835f 250 PANTHER PTHR23416:SF55 1 233 9.0E-97 T 22-04-2016 SCD_RS06210 14e9cfd968e8ed08055ea3efd292835f 250 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 1.1E-77 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 SCD_RS06210 14e9cfd968e8ed08055ea3efd292835f 250 PANTHER PTHR23416 1 233 9.0E-97 T 22-04-2016 SCD_RS06210 14e9cfd968e8ed08055ea3efd292835f 250 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SCD_RS06210 14e9cfd968e8ed08055ea3efd292835f 250 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 150 3.4E-5 T 22-04-2016 IPR001451 Hexapeptide repeat SCD_RS06210 14e9cfd968e8ed08055ea3efd292835f 250 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 108 2.8E-5 T 22-04-2016 IPR001451 Hexapeptide repeat SCD_RS06210 14e9cfd968e8ed08055ea3efd292835f 250 SUPERFAMILY SSF51161 4 170 7.21E-55 T 22-04-2016 IPR011004 Trimeric LpxA-like SCD_RS10670 ae2f0a9c19e04231fdce571f4d7afb36 356 Pfam PF01758 Sodium Bile acid symporter family 63 255 5.4E-31 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 SCD_RS10670 ae2f0a9c19e04231fdce571f4d7afb36 356 PANTHER PTHR10361:SF31 16 350 1.3E-108 T 22-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 SCD_RS10670 ae2f0a9c19e04231fdce571f4d7afb36 356 PIRSF PIRSF005508 4 356 7.9E-113 T 22-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 SCD_RS10670 ae2f0a9c19e04231fdce571f4d7afb36 356 PRINTS PR00173 Glutamate-aspartate symporter signature 227 246 6.8E-6 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SCD_RS10670 ae2f0a9c19e04231fdce571f4d7afb36 356 PRINTS PR00173 Glutamate-aspartate symporter signature 64 84 6.8E-6 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SCD_RS10670 ae2f0a9c19e04231fdce571f4d7afb36 356 PRINTS PR00173 Glutamate-aspartate symporter signature 22 42 6.8E-6 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SCD_RS10670 ae2f0a9c19e04231fdce571f4d7afb36 356 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 17 342 4.4E-110 T 22-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 SCD_RS10670 ae2f0a9c19e04231fdce571f4d7afb36 356 PANTHER PTHR10361 16 350 1.3E-108 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 SCD_RS04455 68e687598bf7d344402bd95df3ab2707 395 Pfam PF03734 L,D-transpeptidase catalytic domain 135 268 1.4E-20 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 SCD_RS04455 68e687598bf7d344402bd95df3ab2707 395 Gene3D G3DSA:2.40.440.10 129 268 2.2E-16 T 22-04-2016 SCD_RS04455 68e687598bf7d344402bd95df3ab2707 395 PANTHER PTHR36699 65 385 6.8E-28 T 22-04-2016 SCD_RS04455 68e687598bf7d344402bd95df3ab2707 395 SUPERFAMILY SSF54427 285 391 1.06E-7 T 22-04-2016 IPR032710 NTF2-like domain SCD_RS04455 68e687598bf7d344402bd95df3ab2707 395 SUPERFAMILY SSF141523 129 268 8.63E-17 T 22-04-2016 SCD_RS09885 ee86f5034d3fb7d4bb508b268a4d2a50 310 PANTHER PTHR30238:SF0 1 307 5.5E-149 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 SCD_RS09885 ee86f5034d3fb7d4bb508b268a4d2a50 310 Pfam PF03741 Integral membrane protein TerC family 72 274 3.0E-56 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 SCD_RS09885 ee86f5034d3fb7d4bb508b268a4d2a50 310 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 1 305 2.1E-125 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 SCD_RS09885 ee86f5034d3fb7d4bb508b268a4d2a50 310 PANTHER PTHR30238 1 307 5.5E-149 T 22-04-2016 SCD_RS01805 6e9e9e9d1c3bdf70a06afd29f25765bd 82 PANTHER PTHR38603 3 79 1.4E-14 T 22-04-2016 SCD_RS01805 6e9e9e9d1c3bdf70a06afd29f25765bd 82 Pfam PF03927 NapD protein 1 75 1.9E-29 T 22-04-2016 IPR005623 Chaperone NapD, nitrate reductase assembly SCD_RS13025 940125c56157b8e18047e88db3ed7aa9 83 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS13025 940125c56157b8e18047e88db3ed7aa9 83 Pfam PF00037 4Fe-4S binding domain 6 25 3.1E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS13025 940125c56157b8e18047e88db3ed7aa9 83 Gene3D G3DSA:3.30.70.20 4 77 2.0E-18 T 22-04-2016 SCD_RS13025 940125c56157b8e18047e88db3ed7aa9 83 SUPERFAMILY SSF54862 4 74 9.99E-19 T 22-04-2016 SCD_RS13025 940125c56157b8e18047e88db3ed7aa9 83 PANTHER PTHR24960 1 81 1.3E-26 T 22-04-2016 SCD_RS13025 940125c56157b8e18047e88db3ed7aa9 83 PANTHER PTHR24960:SF38 1 81 1.3E-26 T 22-04-2016 SCD_RS04335 e25a7e8b8f71da49f8c6bbf7f78346de 378 PANTHER PTHR23522:SF3 1 369 9.5E-88 T 22-04-2016 SCD_RS04335 e25a7e8b8f71da49f8c6bbf7f78346de 378 Pfam PF12832 MFS_1 like family 6 359 2.2E-83 T 22-04-2016 IPR024989 Major facilitator superfamily associated domain SCD_RS04335 e25a7e8b8f71da49f8c6bbf7f78346de 378 PANTHER PTHR23522 1 369 9.5E-88 T 22-04-2016 SCD_RS04335 e25a7e8b8f71da49f8c6bbf7f78346de 378 Gene3D G3DSA:1.20.1250.20 6 179 5.9E-18 T 22-04-2016 SCD_RS04335 e25a7e8b8f71da49f8c6bbf7f78346de 378 SUPERFAMILY SSF103473 6 376 6.54E-47 T 22-04-2016 IPR020846 Major facilitator superfamily domain SCD_RS04335 e25a7e8b8f71da49f8c6bbf7f78346de 378 PIRSF PIRSF004925 1 378 4.7E-104 T 22-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter SCD_RS04335 e25a7e8b8f71da49f8c6bbf7f78346de 378 Gene3D G3DSA:1.20.1250.20 192 376 1.3E-24 T 22-04-2016 SCD_RS07785 4904230655148e86eb6d2ddc812b8eb2 126 Pfam PF01152 Bacterial-like globin 4 119 1.1E-38 T 22-04-2016 IPR001486 Truncated hemoglobin GO:0019825 SCD_RS07785 4904230655148e86eb6d2ddc812b8eb2 126 PANTHER PTHR10681 1 126 3.8E-18 T 22-04-2016 SCD_RS07785 4904230655148e86eb6d2ddc812b8eb2 126 Gene3D G3DSA:1.10.490.10 2 124 6.0E-43 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 SCD_RS07785 4904230655148e86eb6d2ddc812b8eb2 126 ProSitePatterns PS01213 Protozoan/cyanobacterial globins signature. 52 76 - T 22-04-2016 IPR019795 Globin, bacterial-like, conserved site GO:0015671|GO:0019825 SCD_RS07785 4904230655148e86eb6d2ddc812b8eb2 126 SUPERFAMILY SSF46458 3 123 1.62E-37 T 22-04-2016 IPR009050 Globin-like SCD_RS00160 d791230513d155bd4e4f2e121bef4651 681 Gene3D G3DSA:3.40.30.10 20 148 1.8E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS00160 d791230513d155bd4e4f2e121bef4651 681 SUPERFAMILY SSF52833 2 130 1.78E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS00160 d791230513d155bd4e4f2e121bef4651 681 PIRSF PIRSF006402 1 678 1.5E-216 T 22-04-2016 IPR024705 Spermatogenesis-associated protein 20 SCD_RS00160 d791230513d155bd4e4f2e121bef4651 681 Pfam PF03190 Protein of unknown function, DUF255 3 164 1.1E-71 T 22-04-2016 IPR004879 Domain of unknown function DUF255 SCD_RS00160 d791230513d155bd4e4f2e121bef4651 681 Gene3D G3DSA:1.50.10.10 361 537 4.7E-21 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 SCD_RS00160 d791230513d155bd4e4f2e121bef4651 681 Gene3D G3DSA:1.50.10.10 191 323 4.7E-21 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 SCD_RS00160 d791230513d155bd4e4f2e121bef4651 681 SUPERFAMILY SSF48208 188 540 4.86E-76 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SCD_RS14355 fd22a32527bbd93f3727a2f16319fee1 218 Gene3D G3DSA:3.40.50.170 21 134 5.2E-12 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS14355 fd22a32527bbd93f3727a2f16319fee1 218 SUPERFAMILY SSF50486 148 207 2.98E-16 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 SCD_RS14355 fd22a32527bbd93f3727a2f16319fee1 218 SUPERFAMILY SSF53328 19 140 6.8E-23 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SCD_RS06330 00381b5950a421b53489710c481a53ea 145 PANTHER PTHR12901 1 145 2.8E-44 T 22-04-2016 SCD_RS06330 00381b5950a421b53489710c481a53ea 145 Gene3D G3DSA:3.30.530.20 3 144 2.4E-40 T 22-04-2016 IPR023393 START-like domain SCD_RS06330 00381b5950a421b53489710c481a53ea 145 PANTHER PTHR12901:SF7 1 145 2.8E-44 T 22-04-2016 SCD_RS06330 00381b5950a421b53489710c481a53ea 145 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 12 134 3.5E-26 T 22-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain SCD_RS06330 00381b5950a421b53489710c481a53ea 145 SUPERFAMILY SSF55961 1 143 7.5E-28 T 22-04-2016 SCD_RS05505 172dac3b63bb0f3ed42dc8191ea51fac 119 SUPERFAMILY SSF74731 2 116 4.97E-49 T 22-04-2016 SCD_RS05505 172dac3b63bb0f3ed42dc8191ea51fac 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.2E-49 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SCD_RS05505 172dac3b63bb0f3ed42dc8191ea51fac 119 Pfam PF00453 Ribosomal protein L20 3 108 2.6E-48 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SCD_RS05505 172dac3b63bb0f3ed42dc8191ea51fac 119 PANTHER PTHR10986:SF12 2 117 1.3E-60 T 22-04-2016 SCD_RS05505 172dac3b63bb0f3ed42dc8191ea51fac 119 Gene3D G3DSA:1.10.1900.20 55 117 1.6E-28 T 22-04-2016 SCD_RS05505 172dac3b63bb0f3ed42dc8191ea51fac 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 71 2.0E-20 T 22-04-2016 SCD_RS05505 172dac3b63bb0f3ed42dc8191ea51fac 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 6.8E-40 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SCD_RS05505 172dac3b63bb0f3ed42dc8191ea51fac 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 6.8E-40 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SCD_RS05505 172dac3b63bb0f3ed42dc8191ea51fac 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 6.8E-40 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SCD_RS05505 172dac3b63bb0f3ed42dc8191ea51fac 119 PANTHER PTHR10986 2 117 1.3E-60 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SCD_RS05505 172dac3b63bb0f3ed42dc8191ea51fac 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SCD_RS05505 172dac3b63bb0f3ed42dc8191ea51fac 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.744 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SCD_RS11505 7d93bb917868ae2b84e25861ac6fa872 232 PANTHER PTHR13903:SF7 1 231 6.9E-118 T 22-04-2016 SCD_RS11505 7d93bb917868ae2b84e25861ac6fa872 232 Gene3D G3DSA:2.60.120.10 3 231 3.7E-78 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SCD_RS11505 7d93bb917868ae2b84e25861ac6fa872 232 SUPERFAMILY SSF51182 2 231 1.35E-80 T 22-04-2016 IPR011051 RmlC-like cupin domain SCD_RS11505 7d93bb917868ae2b84e25861ac6fa872 232 PANTHER PTHR13903 1 231 6.9E-118 T 22-04-2016 IPR012093 Pirin SCD_RS11505 7d93bb917868ae2b84e25861ac6fa872 232 PIRSF PIRSF006232 1 230 4.4E-57 T 22-04-2016 IPR012093 Pirin SCD_RS11505 7d93bb917868ae2b84e25861ac6fa872 232 Pfam PF02678 Pirin 6 119 1.8E-38 T 22-04-2016 IPR003829 Pirin, N-terminal domain SCD_RS06565 56b605080d3bde0a9a085bc8de5bc12d 425 Pfam PF12693 GspL periplasmic domain 270 391 4.1E-17 T 22-04-2016 IPR025691 GspL periplasmic domain SCD_RS06565 56b605080d3bde0a9a085bc8de5bc12d 425 Pfam PF05134 Type II secretion system (T2SS), protein L 44 259 2.3E-24 T 22-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain SCD_RS06565 56b605080d3bde0a9a085bc8de5bc12d 425 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 22 406 7.3E-52 T 22-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 SCD_RS06565 56b605080d3bde0a9a085bc8de5bc12d 425 SUPERFAMILY SSF53067 25 149 6.86E-24 T 22-04-2016 SCD_RS14945 cc1715b52394836797dc1bd502414f1a 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 1.8E-11 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain SCD_RS14945 cc1715b52394836797dc1bd502414f1a 140 Gene3D G3DSA:1.20.5.440 93 135 1.7E-17 T 22-04-2016 SCD_RS14945 cc1715b52394836797dc1bd502414f1a 140 SUPERFAMILY SSF51344 3 87 7.72E-23 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS14945 cc1715b52394836797dc1bd502414f1a 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 91 2.0E-28 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS14945 cc1715b52394836797dc1bd502414f1a 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 134 2.0E-40 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS14945 cc1715b52394836797dc1bd502414f1a 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 132 20.98 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS14945 cc1715b52394836797dc1bd502414f1a 140 PANTHER PTHR13822 1 140 2.0E-40 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS14945 cc1715b52394836797dc1bd502414f1a 140 SUPERFAMILY SSF46604 90 138 2.2E-13 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain SCD_RS14945 cc1715b52394836797dc1bd502414f1a 140 Gene3D G3DSA:2.60.15.10 3 92 3.6E-28 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS14945 cc1715b52394836797dc1bd502414f1a 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 85 6.0E-28 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SCD_RS13170 333dae0dc6cade2601f38e6491f4a1fd 290 PANTHER PTHR13090:SF3 8 271 6.8E-62 T 22-04-2016 SCD_RS13170 333dae0dc6cade2601f38e6491f4a1fd 290 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 7 272 32.867 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 SCD_RS13170 333dae0dc6cade2601f38e6491f4a1fd 290 Pfam PF08241 Methyltransferase domain 52 155 2.2E-17 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SCD_RS13170 333dae0dc6cade2601f38e6491f4a1fd 290 PANTHER PTHR13090 8 271 6.8E-62 T 22-04-2016 SCD_RS13170 333dae0dc6cade2601f38e6491f4a1fd 290 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 15 272 9.7E-78 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 SCD_RS13170 333dae0dc6cade2601f38e6491f4a1fd 290 Gene3D G3DSA:3.40.50.150 12 263 3.1E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS13170 333dae0dc6cade2601f38e6491f4a1fd 290 SUPERFAMILY SSF53335 12 272 6.56E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS03810 aa0f94b0f2d8477e70146f0b67b98931 374 SUPERFAMILY SSF56762 7 368 5.05E-43 T 22-04-2016 IPR029014 NiFe hydrogenase-like SCD_RS03810 aa0f94b0f2d8477e70146f0b67b98931 374 PANTHER PTHR11993 220 373 1.6E-12 T 22-04-2016 SCD_RS03810 aa0f94b0f2d8477e70146f0b67b98931 374 Gene3D G3DSA:1.10.645.10 4 90 7.1E-7 T 22-04-2016 IPR029014 NiFe hydrogenase-like SCD_RS03810 aa0f94b0f2d8477e70146f0b67b98931 374 Gene3D G3DSA:1.10.645.10 216 368 3.6E-26 T 22-04-2016 IPR029014 NiFe hydrogenase-like SCD_RS03810 aa0f94b0f2d8477e70146f0b67b98931 374 PANTHER PTHR11993:SF26 220 373 1.6E-12 T 22-04-2016 SCD_RS06190 6a735fa5c37d31eb4198c7d25e191469 160 SUPERFAMILY SSF54534 2 140 1.2E-27 T 22-04-2016 SCD_RS06190 6a735fa5c37d31eb4198c7d25e191469 160 PANTHER PTHR10516:SF316 129 160 2.1E-18 T 22-04-2016 SCD_RS06190 6a735fa5c37d31eb4198c7d25e191469 160 PANTHER PTHR10516:SF316 1 82 2.1E-18 T 22-04-2016 SCD_RS06190 6a735fa5c37d31eb4198c7d25e191469 160 PANTHER PTHR10516 129 160 2.1E-18 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SCD_RS06190 6a735fa5c37d31eb4198c7d25e191469 160 PANTHER PTHR10516 1 82 2.1E-18 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SCD_RS06190 6a735fa5c37d31eb4198c7d25e191469 160 Gene3D G3DSA:3.10.50.40 126 138 2.9E-8 T 22-04-2016 SCD_RS06190 6a735fa5c37d31eb4198c7d25e191469 160 Gene3D G3DSA:3.10.50.40 2 79 2.9E-8 T 22-04-2016 SCD_RS06190 6a735fa5c37d31eb4198c7d25e191469 160 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 110 1.5E-6 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SCD_RS02020 7965a921118e42413dd5952503551fc0 391 PANTHER PTHR30469 1 368 4.5E-47 T 22-04-2016 SCD_RS02020 7965a921118e42413dd5952503551fc0 391 Gene3D G3DSA:2.40.50.100 186 211 4.5E-9 T 22-04-2016 SCD_RS02020 7965a921118e42413dd5952503551fc0 391 Gene3D G3DSA:2.40.50.100 71 97 4.5E-9 T 22-04-2016 SCD_RS02020 7965a921118e42413dd5952503551fc0 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 292 1.8E-17 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SCD_RS02020 7965a921118e42413dd5952503551fc0 391 SUPERFAMILY SSF111369 54 305 3.79E-17 T 22-04-2016 SCD_RS02020 7965a921118e42413dd5952503551fc0 391 Pfam PF00529 HlyD membrane-fusion protein of T1SS 40 367 1.0E-7 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SCD_RS02020 7965a921118e42413dd5952503551fc0 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 368 6.8E-52 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SCD_RS09975 ed4be33cfc5417fa7a9f4db11648a3d1 601 Gene3D G3DSA:3.30.750.24 457 549 2.4E-11 T 22-04-2016 IPR002645 STAS domain SCD_RS09975 ed4be33cfc5417fa7a9f4db11648a3d1 601 Pfam PF01740 STAS domain 461 559 5.9E-11 T 22-04-2016 IPR002645 STAS domain SCD_RS09975 ed4be33cfc5417fa7a9f4db11648a3d1 601 Pfam PF00916 Sulfate permease family 35 405 1.6E-91 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 SCD_RS09975 ed4be33cfc5417fa7a9f4db11648a3d1 601 PANTHER PTHR11814:SF71 15 589 9.1E-164 T 22-04-2016 SCD_RS09975 ed4be33cfc5417fa7a9f4db11648a3d1 601 SUPERFAMILY SSF52091 456 552 2.94E-14 T 22-04-2016 IPR002645 STAS domain SCD_RS09975 ed4be33cfc5417fa7a9f4db11648a3d1 601 PANTHER PTHR11814 15 589 9.1E-164 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 SCD_RS12545 d1995f4bda96a248b675921c64cee09c 406 PANTHER PTHR30124 49 394 2.0E-114 T 22-04-2016 SCD_RS12545 d1995f4bda96a248b675921c64cee09c 406 SUPERFAMILY SSF50685 44 391 5.23E-139 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SCD_RS12545 d1995f4bda96a248b675921c64cee09c 406 Gene3D G3DSA:2.40.40.10 49 195 2.4E-36 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SCD_RS12545 d1995f4bda96a248b675921c64cee09c 406 Gene3D G3DSA:2.40.40.10 202 392 1.3E-55 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SCD_RS12545 d1995f4bda96a248b675921c64cee09c 406 PANTHER PTHR30124:SF0 49 394 2.0E-114 T 22-04-2016 SCD_RS12545 d1995f4bda96a248b675921c64cee09c 406 Pfam PF03562 MltA specific insert domain 60 291 1.1E-86 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 SCD_RS12545 d1995f4bda96a248b675921c64cee09c 406 Pfam PF06725 3D domain 312 385 4.9E-25 T 22-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 SCD_RS12545 d1995f4bda96a248b675921c64cee09c 406 PIRSF PIRSF019422 1 394 1.4E-139 T 22-04-2016 IPR026044 Membrane-bound lytic murein transglycosylase A SCD_RS12545 d1995f4bda96a248b675921c64cee09c 406 SMART SM00925 134 291 2.3E-89 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 SCD_RS03315 f0fe12beb9c9835c3ec2c9d76c86c988 250 SUPERFAMILY SSF56219 3 246 4.71E-50 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SCD_RS03315 f0fe12beb9c9835c3ec2c9d76c86c988 250 PANTHER PTHR15822 3 250 4.1E-75 T 22-04-2016 SCD_RS03315 f0fe12beb9c9835c3ec2c9d76c86c988 250 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 8 240 1.8E-20 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SCD_RS03315 f0fe12beb9c9835c3ec2c9d76c86c988 250 Gene3D G3DSA:3.60.10.10 2 178 7.6E-16 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SCD_RS03315 f0fe12beb9c9835c3ec2c9d76c86c988 250 PANTHER PTHR15822:SF7 3 250 4.1E-75 T 22-04-2016 SCD_RS15745 68339ec139652bc340fbc06c42839a74 181 Pfam PF07295 Zinc-ribbon containing domain 39 178 1.6E-35 T 22-04-2016 IPR009912 Zinc-ribbon containing domain SCD_RS02170 3a153053c02bb5ff0b60587733da10c8 408 Pfam PF05940 NnrS protein 11 402 3.2E-70 T 22-04-2016 IPR010266 NnrS SCD_RS09780 5d8f7135b93c50347d794de65b537c31 346 SUPERFAMILY SSF51395 1 336 1.1E-104 T 22-04-2016 SCD_RS09780 5d8f7135b93c50347d794de65b537c31 346 PANTHER PTHR11938 1 344 1.3E-94 T 22-04-2016 SCD_RS09780 5d8f7135b93c50347d794de65b537c31 346 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 336 6.4E-138 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS09780 5d8f7135b93c50347d794de65b537c31 346 Gene3D G3DSA:3.20.20.70 1 337 3.2E-127 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS09780 5d8f7135b93c50347d794de65b537c31 346 PIRSF PIRSF000164 15 345 2.2E-97 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 SCD_RS09780 5d8f7135b93c50347d794de65b537c31 346 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 79 98 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 SCD_RS09780 5d8f7135b93c50347d794de65b537c31 346 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 335 51.707 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS09780 5d8f7135b93c50347d794de65b537c31 346 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 291 311 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 SCD_RS09780 5d8f7135b93c50347d794de65b537c31 346 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 8.6E-93 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 SCD_RS10050 2b9faa26e9b886300321524a508eb130 118 Gene3D G3DSA:3.30.190.10 17 115 5.1E-41 T 22-04-2016 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 SCD_RS10050 2b9faa26e9b886300321524a508eb130 118 SUPERFAMILY SSF55239 12 115 1.31E-40 T 22-04-2016 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 SCD_RS10050 2b9faa26e9b886300321524a508eb130 118 PANTHER PTHR31262:SF6 17 114 4.6E-26 T 22-04-2016 SCD_RS10050 2b9faa26e9b886300321524a508eb130 118 SMART SM00961 18 115 5.6E-48 T 22-04-2016 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 SCD_RS10050 2b9faa26e9b886300321524a508eb130 118 PANTHER PTHR31262 17 114 4.6E-26 T 22-04-2016 SCD_RS10050 2b9faa26e9b886300321524a508eb130 118 Pfam PF00101 Ribulose bisphosphate carboxylase, small chain 19 114 4.6E-37 T 22-04-2016 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 SCD_RS11245 d3146da2c1bb4b7d5cc32612de2516aa 468 PANTHER PTHR35093 220 468 3.9E-27 T 22-04-2016 SCD_RS11245 d3146da2c1bb4b7d5cc32612de2516aa 468 PANTHER PTHR35093 1 194 3.9E-27 T 22-04-2016 SCD_RS11245 d3146da2c1bb4b7d5cc32612de2516aa 468 SUPERFAMILY SSF56935 20 468 7.32E-67 T 22-04-2016 SCD_RS11245 d3146da2c1bb4b7d5cc32612de2516aa 468 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 16 444 5.8E-47 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) SCD_RS11245 d3146da2c1bb4b7d5cc32612de2516aa 468 Gene3D G3DSA:2.40.160.60 19 468 7.7E-83 T 22-04-2016 SCD_RS09090 892a76f6c646a1437d1a1d051d71bcac 71 Gene3D G3DSA:3.30.70.100 2 67 8.9E-21 T 22-04-2016 SCD_RS09090 892a76f6c646a1437d1a1d051d71bcac 71 SUPERFAMILY SSF55008 2 68 9.56E-19 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SCD_RS09090 892a76f6c646a1437d1a1d051d71bcac 71 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SCD_RS09090 892a76f6c646a1437d1a1d051d71bcac 71 PANTHER PTHR24093 4 67 1.3E-13 T 22-04-2016 SCD_RS09090 892a76f6c646a1437d1a1d051d71bcac 71 Pfam PF00403 Heavy-metal-associated domain 6 66 6.1E-16 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SCD_RS11675 c736a5948559d05f8654e3e5c9dc9375 419 Pfam PF01189 16S rRNA methyltransferase RsmB/F 218 415 7.2E-54 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SCD_RS11675 c736a5948559d05f8654e3e5c9dc9375 419 Gene3D G3DSA:3.40.50.150 209 418 2.6E-56 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS11675 c736a5948559d05f8654e3e5c9dc9375 419 PANTHER PTHR22807:SF33 111 417 1.4E-88 T 22-04-2016 SCD_RS11675 c736a5948559d05f8654e3e5c9dc9375 419 SUPERFAMILY SSF53335 111 417 6.75E-73 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS11675 c736a5948559d05f8654e3e5c9dc9375 419 Gene3D G3DSA:1.10.940.10 11 70 1.2E-4 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SCD_RS11675 c736a5948559d05f8654e3e5c9dc9375 419 PANTHER PTHR22807 111 417 1.4E-88 T 22-04-2016 SCD_RS11675 c736a5948559d05f8654e3e5c9dc9375 419 Gene3D G3DSA:3.30.70.1170 150 207 8.9E-15 T 22-04-2016 SCD_RS11675 c736a5948559d05f8654e3e5c9dc9375 419 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 400 417 1.9E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SCD_RS11675 c736a5948559d05f8654e3e5c9dc9375 419 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 297 309 1.9E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SCD_RS11675 c736a5948559d05f8654e3e5c9dc9375 419 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 228 238 1.9E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SCD_RS11675 c736a5948559d05f8654e3e5c9dc9375 419 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 347 363 1.9E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SCD_RS11675 c736a5948559d05f8654e3e5c9dc9375 419 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 199 213 1.9E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SCD_RS10495 b964b90f88041fca142e41c4637be163 140 Gene3D G3DSA:1.10.10.10 8 87 5.8E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS10495 b964b90f88041fca142e41c4637be163 140 SUPERFAMILY SSF46785 8 127 1.82E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS10495 b964b90f88041fca142e41c4637be163 140 Pfam PF01475 Ferric uptake regulator family 20 109 5.8E-17 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SCD_RS10495 b964b90f88041fca142e41c4637be163 140 PANTHER PTHR33202 1 106 2.5E-22 T 22-04-2016 SCD_RS10495 b964b90f88041fca142e41c4637be163 140 PANTHER PTHR33202:SF7 1 106 2.5E-22 T 22-04-2016 SCD_RS08725 ca3d70517217a0b17d213b3505367e3b 210 PANTHER PTHR31299 1 207 1.8E-62 T 22-04-2016 SCD_RS08725 ca3d70517217a0b17d213b3505367e3b 210 Gene3D G3DSA:3.40.50.2020 2 203 3.5E-36 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SCD_RS08725 ca3d70517217a0b17d213b3505367e3b 210 SUPERFAMILY SSF53271 1 207 2.36E-47 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SCD_RS08725 ca3d70517217a0b17d213b3505367e3b 210 Pfam PF00156 Phosphoribosyl transferase domain 7 194 5.8E-42 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SCD_RS08995 0c3c378c80249ee1e940128393f52b3f 429 PANTHER PTHR33362 1 427 1.1E-197 T 22-04-2016 SCD_RS08995 0c3c378c80249ee1e940128393f52b3f 429 PANTHER PTHR33362:SF6 1 427 1.1E-197 T 22-04-2016 SCD_RS08995 0c3c378c80249ee1e940128393f52b3f 429 PIRSF PIRSF006066 1 429 2.4E-152 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 SCD_RS08995 0c3c378c80249ee1e940128393f52b3f 429 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 424 1.9E-146 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 SCD_RS08995 0c3c378c80249ee1e940128393f52b3f 429 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 419 1.6E-127 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit SCD_RS14790 160d4057eb0185022062c32eabe97775 612 Gene3D G3DSA:3.40.50.620 210 364 3.2E-65 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS14790 160d4057eb0185022062c32eabe97775 612 Gene3D G3DSA:3.40.50.620 460 610 3.2E-65 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS14790 160d4057eb0185022062c32eabe97775 612 PIRSF PIRSF001589 83 611 8.5E-89 T 22-04-2016 SCD_RS14790 160d4057eb0185022062c32eabe97775 612 SUPERFAMILY SSF56235 32 210 6.09E-23 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SCD_RS14790 160d4057eb0185022062c32eabe97775 612 Gene3D G3DSA:3.60.20.10 42 209 3.4E-23 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SCD_RS14790 160d4057eb0185022062c32eabe97775 612 PANTHER PTHR11772:SF10 90 369 1.1E-65 T 22-04-2016 SCD_RS14790 160d4057eb0185022062c32eabe97775 612 PANTHER PTHR11772:SF10 456 567 1.1E-65 T 22-04-2016 SCD_RS14790 160d4057eb0185022062c32eabe97775 612 SUPERFAMILY SSF52402 464 604 2.4E-64 T 22-04-2016 SCD_RS14790 160d4057eb0185022062c32eabe97775 612 SUPERFAMILY SSF52402 219 367 2.4E-64 T 22-04-2016 SCD_RS14790 160d4057eb0185022062c32eabe97775 612 PANTHER PTHR11772 90 369 1.1E-65 T 22-04-2016 SCD_RS14790 160d4057eb0185022062c32eabe97775 612 PANTHER PTHR11772 456 567 1.1E-65 T 22-04-2016 SCD_RS14790 160d4057eb0185022062c32eabe97775 612 Pfam PF13537 Glutamine amidotransferase domain 90 152 2.7E-10 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SCD_RS14790 160d4057eb0185022062c32eabe97775 612 Pfam PF00733 Asparagine synthase 228 610 8.4E-76 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 SCD_RS13515 41a99cc1638f0cff2f075844eac00017 427 Pfam PF07719 Tetratricopeptide repeat 163 196 5.9E-7 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 SCD_RS13515 41a99cc1638f0cff2f075844eac00017 427 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 9 124 3.9E-32 T 22-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI SCD_RS13515 41a99cc1638f0cff2f075844eac00017 427 Gene3D G3DSA:1.25.40.10 202 283 5.5E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS13515 41a99cc1638f0cff2f075844eac00017 427 SMART SM00028 234 267 19.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS13515 41a99cc1638f0cff2f075844eac00017 427 SMART SM00028 163 196 5.4E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS13515 41a99cc1638f0cff2f075844eac00017 427 SUPERFAMILY SSF48452 160 269 2.04E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS13515 41a99cc1638f0cff2f075844eac00017 427 Gene3D G3DSA:1.25.40.10 139 201 1.2E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS07375 783abf24790f4f84055bea15bef2a1db 486 PANTHER PTHR16943:SF19 1 486 4.9E-262 T 22-04-2016 SCD_RS07375 783abf24790f4f84055bea15bef2a1db 486 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 13 486 1.9E-259 T 22-04-2016 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79|UniPathway: UPA00946 SCD_RS07375 783abf24790f4f84055bea15bef2a1db 486 PANTHER PTHR16943 1 486 4.9E-262 T 22-04-2016 IPR005656 MmgE/PrpD GO:0016829 SCD_RS07375 783abf24790f4f84055bea15bef2a1db 486 Gene3D G3DSA:3.30.1330.120 287 429 9.9E-57 T 22-04-2016 SCD_RS07375 783abf24790f4f84055bea15bef2a1db 486 Pfam PF03972 MmgE/PrpD family 18 468 3.6E-158 T 22-04-2016 IPR005656 MmgE/PrpD GO:0016829 SCD_RS07375 783abf24790f4f84055bea15bef2a1db 486 SUPERFAMILY SSF103378 12 484 3.66E-155 T 22-04-2016 IPR005656 MmgE/PrpD GO:0016829 SCD_RS04925 982542a5d5d382b5c3536c79c9e2e14b 206 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 2 172 3.2E-24 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SCD_RS04925 982542a5d5d382b5c3536c79c9e2e14b 206 Gene3D G3DSA:3.30.420.10 3 171 1.6E-53 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS04925 982542a5d5d382b5c3536c79c9e2e14b 206 SMART SM00479 3 170 4.6E-37 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SCD_RS04925 982542a5d5d382b5c3536c79c9e2e14b 206 PANTHER PTHR30231 2 172 1.7E-45 T 22-04-2016 SCD_RS04925 982542a5d5d382b5c3536c79c9e2e14b 206 Pfam PF00929 Exonuclease 6 160 2.2E-28 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SCD_RS04925 982542a5d5d382b5c3536c79c9e2e14b 206 SUPERFAMILY SSF53098 3 171 1.8E-50 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS02270 28d5ff3b75428731222116265d2935b7 458 SUPERFAMILY SSF81442 4 451 2.49E-92 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS02270 28d5ff3b75428731222116265d2935b7 458 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 196 252 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS02270 28d5ff3b75428731222116265d2935b7 458 Gene3D G3DSA:1.20.210.10 4 449 1.2E-19 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS02270 28d5ff3b75428731222116265d2935b7 458 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 8 435 1.0E-82 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS02270 28d5ff3b75428731222116265d2935b7 458 PANTHER PTHR10422 12 456 6.9E-114 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS02270 28d5ff3b75428731222116265d2935b7 458 PANTHER PTHR10422:SF24 12 456 6.9E-114 T 22-04-2016 SCD_RS05700 7fdf715515945eb594e7a28980134fc7 200 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 158 180 5.1E-5 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SCD_RS05700 7fdf715515945eb594e7a28980134fc7 200 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 11 34 5.1E-5 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SCD_RS05700 7fdf715515945eb594e7a28980134fc7 200 PANTHER PTHR30485:SF1 4 199 1.7E-24 T 22-04-2016 SCD_RS05700 7fdf715515945eb594e7a28980134fc7 200 PANTHER PTHR30485 4 199 1.7E-24 T 22-04-2016 SCD_RS05700 7fdf715515945eb594e7a28980134fc7 200 SUPERFAMILY SSF81342 4 198 3.92E-28 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SCD_RS05700 7fdf715515945eb594e7a28980134fc7 200 Gene3D G3DSA:1.20.950.20 3 196 5.4E-29 T 22-04-2016 SCD_RS05700 7fdf715515945eb594e7a28980134fc7 200 Pfam PF01292 Prokaryotic cytochrome b561 9 195 1.2E-21 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SCD_RS05725 7fdf715515945eb594e7a28980134fc7 200 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 158 180 5.1E-5 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SCD_RS05725 7fdf715515945eb594e7a28980134fc7 200 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 11 34 5.1E-5 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SCD_RS05725 7fdf715515945eb594e7a28980134fc7 200 PANTHER PTHR30485:SF1 4 199 1.7E-24 T 22-04-2016 SCD_RS05725 7fdf715515945eb594e7a28980134fc7 200 PANTHER PTHR30485 4 199 1.7E-24 T 22-04-2016 SCD_RS05725 7fdf715515945eb594e7a28980134fc7 200 SUPERFAMILY SSF81342 4 198 3.92E-28 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SCD_RS05725 7fdf715515945eb594e7a28980134fc7 200 Gene3D G3DSA:1.20.950.20 3 196 5.4E-29 T 22-04-2016 SCD_RS05725 7fdf715515945eb594e7a28980134fc7 200 Pfam PF01292 Prokaryotic cytochrome b561 9 195 1.2E-21 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SCD_RS10445 12da8d25181b5190a6ca8ccf347e7bd3 576 Gene3D G3DSA:2.130.10.10 187 288 3.8E-5 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SCD_RS10445 12da8d25181b5190a6ca8ccf347e7bd3 576 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 70 142 3.2E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS10445 12da8d25181b5190a6ca8ccf347e7bd3 576 Gene3D G3DSA:2.140.10.20 289 567 2.7E-150 T 22-04-2016 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain SCD_RS10445 12da8d25181b5190a6ca8ccf347e7bd3 576 Pfam PF02239 Cytochrome D1 heme domain 179 571 1.4E-155 T 22-04-2016 SCD_RS10445 12da8d25181b5190a6ca8ccf347e7bd3 576 SUPERFAMILY SSF51004 151 576 1.83E-124 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain SCD_RS10445 12da8d25181b5190a6ca8ccf347e7bd3 576 SUPERFAMILY SSF46626 48 165 7.76E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS10445 12da8d25181b5190a6ca8ccf347e7bd3 576 Gene3D G3DSA:1.10.760.10 59 147 3.7E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS06100 08af2dc23543f258e5bc809d4bc5169f 153 PRINTS PR01004 Flagellar FliJ protein signature 44 61 9.4E-7 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 SCD_RS06100 08af2dc23543f258e5bc809d4bc5169f 153 PRINTS PR01004 Flagellar FliJ protein signature 108 126 9.4E-7 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 SCD_RS06100 08af2dc23543f258e5bc809d4bc5169f 153 PRINTS PR01004 Flagellar FliJ protein signature 4 26 9.4E-7 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 SCD_RS06100 08af2dc23543f258e5bc809d4bc5169f 153 PRINTS PR01004 Flagellar FliJ protein signature 27 43 9.4E-7 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 SCD_RS06100 08af2dc23543f258e5bc809d4bc5169f 153 PRINTS PR01004 Flagellar FliJ protein signature 63 84 9.4E-7 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 SCD_RS06100 08af2dc23543f258e5bc809d4bc5169f 153 PRINTS PR01004 Flagellar FliJ protein signature 126 146 9.4E-7 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 SCD_RS06100 08af2dc23543f258e5bc809d4bc5169f 153 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 4 143 1.2E-28 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 SCD_RS06100 08af2dc23543f258e5bc809d4bc5169f 153 Pfam PF02050 Flagellar FliJ protein 19 142 7.0E-26 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 SCD_RS06100 08af2dc23543f258e5bc809d4bc5169f 153 PIRSF PIRSF019404 1 148 6.9E-41 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 SCD_RS06100 08af2dc23543f258e5bc809d4bc5169f 153 PANTHER PTHR38786 1 149 9.2E-24 T 22-04-2016 SCD_RS01565 0e8405de26be936e0a6853d4342c06c4 303 Gene3D G3DSA:3.40.50.1980 197 303 1.8E-8 T 22-04-2016 SCD_RS01565 0e8405de26be936e0a6853d4342c06c4 303 SUPERFAMILY SSF53807 18 303 4.46E-57 T 22-04-2016 SCD_RS01565 0e8405de26be936e0a6853d4342c06c4 303 Pfam PF01297 Zinc-uptake complex component A periplasmic 33 297 3.0E-29 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 SCD_RS01565 0e8405de26be936e0a6853d4342c06c4 303 Gene3D G3DSA:3.40.50.1980 13 176 5.8E-27 T 22-04-2016 SCD_RS01565 0e8405de26be936e0a6853d4342c06c4 303 PANTHER PTHR30477:SF11 22 278 1.8E-80 T 22-04-2016 SCD_RS01565 0e8405de26be936e0a6853d4342c06c4 303 PANTHER PTHR30477 22 278 1.8E-80 T 22-04-2016 SCD_RS15870 25619eb508b0b19ad0d7c9c4f794c071 363 SUPERFAMILY SSF48452 178 342 4.55E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS15870 25619eb508b0b19ad0d7c9c4f794c071 363 SMART SM00028 179 212 0.036 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS15870 25619eb508b0b19ad0d7c9c4f794c071 363 SMART SM00028 281 314 0.026 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS15870 25619eb508b0b19ad0d7c9c4f794c071 363 Gene3D G3DSA:1.25.40.10 177 341 7.6E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS15870 25619eb508b0b19ad0d7c9c4f794c071 363 PANTHER PTHR23083 163 341 9.0E-19 T 22-04-2016 SCD_RS15870 25619eb508b0b19ad0d7c9c4f794c071 363 Pfam PF13432 Tetratricopeptide repeat 183 237 6.8E-4 T 22-04-2016 SCD_RS15870 25619eb508b0b19ad0d7c9c4f794c071 363 Pfam PF13432 Tetratricopeptide repeat 287 342 0.0017 T 22-04-2016 SCD_RS12370 b8dc4b74a7b3fcf36896577720635295 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 2 192 35.52 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 SCD_RS12370 b8dc4b74a7b3fcf36896577720635295 196 Pfam PF13580 SIS domain 10 146 8.5E-37 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SCD_RS12370 b8dc4b74a7b3fcf36896577720635295 196 Gene3D G3DSA:3.40.50.10490 4 189 1.9E-59 T 22-04-2016 SCD_RS12370 b8dc4b74a7b3fcf36896577720635295 196 PANTHER PTHR30390:SF5 3 196 9.4E-91 T 22-04-2016 SCD_RS12370 b8dc4b74a7b3fcf36896577720635295 196 SUPERFAMILY SSF53697 3 190 3.25E-56 T 22-04-2016 SCD_RS12370 b8dc4b74a7b3fcf36896577720635295 196 PANTHER PTHR30390 3 196 9.4E-91 T 22-04-2016 SCD_RS11840 1d0217125ef509eebbf232272d3ce6f6 317 SUPERFAMILY SSF53448 48 290 7.03E-52 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS11840 1d0217125ef509eebbf232272d3ce6f6 317 PANTHER PTHR22916 5 292 3.3E-63 T 22-04-2016 SCD_RS11840 1d0217125ef509eebbf232272d3ce6f6 317 Pfam PF00535 Glycosyl transferase family 2 60 184 2.4E-24 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SCD_RS11840 1d0217125ef509eebbf232272d3ce6f6 317 Gene3D G3DSA:3.90.550.10 57 279 9.4E-50 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS11840 1d0217125ef509eebbf232272d3ce6f6 317 PANTHER PTHR22916:SF4 5 292 3.3E-63 T 22-04-2016 SCD_RS11040 d90056bbe925e7d8d76517573828fd93 294 Gene3D G3DSA:3.40.50.1820 60 291 2.3E-69 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SCD_RS11040 d90056bbe925e7d8d76517573828fd93 294 PANTHER PTHR17630 24 292 5.1E-96 T 22-04-2016 SCD_RS11040 d90056bbe925e7d8d76517573828fd93 294 SUPERFAMILY SSF53474 60 291 1.37E-52 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SCD_RS11040 d90056bbe925e7d8d76517573828fd93 294 PANTHER PTHR17630:SF42 24 292 5.1E-96 T 22-04-2016 SCD_RS11040 d90056bbe925e7d8d76517573828fd93 294 Pfam PF01738 Dienelactone hydrolase family 72 291 4.0E-69 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 SCD_RS12255 daaf2fa04dd7fbb83110c7db8e95bb99 384 SMART SM00864 13 204 2.2E-108 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SCD_RS12255 daaf2fa04dd7fbb83110c7db8e95bb99 384 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 SCD_RS12255 daaf2fa04dd7fbb83110c7db8e95bb99 384 PRINTS PR00423 Cell division protein FtsZ signature 188 210 4.6E-45 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SCD_RS12255 daaf2fa04dd7fbb83110c7db8e95bb99 384 PRINTS PR00423 Cell division protein FtsZ signature 211 232 4.6E-45 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SCD_RS12255 daaf2fa04dd7fbb83110c7db8e95bb99 384 PRINTS PR00423 Cell division protein FtsZ signature 98 118 4.6E-45 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SCD_RS12255 daaf2fa04dd7fbb83110c7db8e95bb99 384 PRINTS PR00423 Cell division protein FtsZ signature 126 147 4.6E-45 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SCD_RS12255 daaf2fa04dd7fbb83110c7db8e95bb99 384 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 369 36.903 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 SCD_RS12255 daaf2fa04dd7fbb83110c7db8e95bb99 384 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 172 7.6E-41 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SCD_RS12255 daaf2fa04dd7fbb83110c7db8e95bb99 384 SUPERFAMILY SSF55307 204 318 2.75E-41 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal SCD_RS12255 daaf2fa04dd7fbb83110c7db8e95bb99 384 SMART SM00865 206 324 3.0E-56 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain SCD_RS12255 daaf2fa04dd7fbb83110c7db8e95bb99 384 Gene3D G3DSA:3.30.1330.20 214 318 4.5E-46 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain SCD_RS12255 daaf2fa04dd7fbb83110c7db8e95bb99 384 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 325 1.1E-125 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 SCD_RS12255 daaf2fa04dd7fbb83110c7db8e95bb99 384 Pfam PF12327 FtsZ family, C-terminal domain 221 315 6.2E-33 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal SCD_RS12255 daaf2fa04dd7fbb83110c7db8e95bb99 384 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 SCD_RS12255 daaf2fa04dd7fbb83110c7db8e95bb99 384 SUPERFAMILY SSF52490 2 204 6.28E-67 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SCD_RS12255 daaf2fa04dd7fbb83110c7db8e95bb99 384 Gene3D G3DSA:3.40.50.1440 14 213 1.3E-89 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SCD_RS02515 18038356cca86df1ba43a1684bfc32e8 176 Gene3D G3DSA:3.40.1410.10 9 171 6.7E-50 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SCD_RS02515 18038356cca86df1ba43a1684bfc32e8 176 PANTHER PTHR38683 19 169 1.7E-30 T 22-04-2016 SCD_RS02515 18038356cca86df1ba43a1684bfc32e8 176 Pfam PF04345 Chorismate lyase 9 171 7.7E-29 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 SCD_RS02515 18038356cca86df1ba43a1684bfc32e8 176 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 3 174 26.645 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 SCD_RS02515 18038356cca86df1ba43a1684bfc32e8 176 SUPERFAMILY SSF64288 13 171 1.29E-41 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SCD_RS06030 1c2ae117fad035ad887338141584300a 127 PANTHER PTHR35303 8 124 8.9E-53 T 22-04-2016 SCD_RS06030 1c2ae117fad035ad887338141584300a 127 PANTHER PTHR35303:SF1 8 124 8.9E-53 T 22-04-2016 SCD_RS06030 1c2ae117fad035ad887338141584300a 127 Pfam PF06155 Protein of unknown function (DUF971) 14 98 7.9E-31 T 22-04-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 SCD_RS14910 30dded147a2386b7bebb336443274e99 204 SUPERFAMILY SSF110997 122 197 1.96E-16 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SCD_RS14910 30dded147a2386b7bebb336443274e99 204 Pfam PF05036 Sporulation related domain 122 196 7.9E-14 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SCD_RS14910 30dded147a2386b7bebb336443274e99 204 Gene3D G3DSA:3.30.70.1070 119 199 2.2E-20 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SCD_RS12025 88bd806b04cf637322152cc811e8600c 611 PIRSF PIRSF006337 5 597 1.9E-224 T 22-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 SCD_RS12025 88bd806b04cf637322152cc811e8600c 611 PANTHER PTHR10357:SF110 9 479 6.2E-119 T 22-04-2016 SCD_RS12025 88bd806b04cf637322152cc811e8600c 611 PANTHER PTHR10357:SF110 506 568 6.2E-119 T 22-04-2016 SCD_RS12025 88bd806b04cf637322152cc811e8600c 611 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 8 68 7.8E-9 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 SCD_RS12025 88bd806b04cf637322152cc811e8600c 611 SUPERFAMILY SSF81296 5 95 1.3E-21 T 22-04-2016 IPR014756 Immunoglobulin E-set SCD_RS12025 88bd806b04cf637322152cc811e8600c 611 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 19 571 2.8E-214 T 22-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 SCD_RS12025 88bd806b04cf637322152cc811e8600c 611 Pfam PF11941 Domain of unknown function (DUF3459) 513 603 3.6E-19 T 22-04-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) SCD_RS12025 88bd806b04cf637322152cc811e8600c 611 SMART SM00642 117 480 1.7E-9 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SCD_RS12025 88bd806b04cf637322152cc811e8600c 611 Gene3D G3DSA:3.20.20.80 485 523 1.4E-80 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SCD_RS12025 88bd806b04cf637322152cc811e8600c 611 Gene3D G3DSA:3.20.20.80 100 444 1.4E-80 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SCD_RS12025 88bd806b04cf637322152cc811e8600c 611 Pfam PF00128 Alpha amylase, catalytic domain 127 215 1.4E-18 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SCD_RS12025 88bd806b04cf637322152cc811e8600c 611 SUPERFAMILY SSF51445 92 523 7.57E-113 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SCD_RS12025 88bd806b04cf637322152cc811e8600c 611 Gene3D G3DSA:2.60.40.10 10 95 6.8E-28 T 22-04-2016 IPR013783 Immunoglobulin-like fold SCD_RS12025 88bd806b04cf637322152cc811e8600c 611 PANTHER PTHR10357 9 479 6.2E-119 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SCD_RS12025 88bd806b04cf637322152cc811e8600c 611 PANTHER PTHR10357 506 568 6.2E-119 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SCD_RS13305 7ad700f261d3ddba0359813c3250d3b6 154 PANTHER PTHR36918:SF1 3 154 1.9E-55 T 22-04-2016 SCD_RS13305 7ad700f261d3ddba0359813c3250d3b6 154 PANTHER PTHR36918 3 154 1.9E-55 T 22-04-2016 SCD_RS13305 7ad700f261d3ddba0359813c3250d3b6 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 4.5E-34 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SCD_RS13305 7ad700f261d3ddba0359813c3250d3b6 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 4.5E-34 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SCD_RS13305 7ad700f261d3ddba0359813c3250d3b6 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 12 29 4.5E-34 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SCD_RS13305 7ad700f261d3ddba0359813c3250d3b6 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 4.5E-34 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SCD_RS13305 7ad700f261d3ddba0359813c3250d3b6 154 Gene3D G3DSA:3.10.420.10 3 150 8.3E-59 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SCD_RS13305 7ad700f261d3ddba0359813c3250d3b6 154 Pfam PF02556 Preprotein translocase subunit SecB 4 143 1.4E-57 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SCD_RS13305 7ad700f261d3ddba0359813c3250d3b6 154 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 4 142 2.3E-53 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SCD_RS13305 7ad700f261d3ddba0359813c3250d3b6 154 SUPERFAMILY SSF54611 1 141 5.89E-53 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SCD_RS13305 7ad700f261d3ddba0359813c3250d3b6 154 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.544 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SCD_RS06680 19754ccfb418b2d77b88d99d7cbbf5b7 402 Pfam PF13579 Glycosyl transferase 4-like domain 15 203 2.2E-25 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SCD_RS06680 19754ccfb418b2d77b88d99d7cbbf5b7 402 SUPERFAMILY SSF53756 2 397 1.74E-53 T 22-04-2016 SCD_RS06680 19754ccfb418b2d77b88d99d7cbbf5b7 402 Gene3D G3DSA:3.40.50.2000 201 383 3.3E-11 T 22-04-2016 SCD_RS06680 19754ccfb418b2d77b88d99d7cbbf5b7 402 PANTHER PTHR12526 1 397 2.8E-51 T 22-04-2016 SCD_RS06680 19754ccfb418b2d77b88d99d7cbbf5b7 402 Pfam PF13692 Glycosyl transferases group 1 230 369 1.6E-16 T 22-04-2016 SCD_RS06680 19754ccfb418b2d77b88d99d7cbbf5b7 402 PANTHER PTHR12526:SF320 1 397 2.8E-51 T 22-04-2016 SCD_RS10585 26d96225dceab42abc2146273630899e 316 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 SCD_RS10585 26d96225dceab42abc2146273630899e 316 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 309 49.412 T 22-04-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 SCD_RS10585 26d96225dceab42abc2146273630899e 316 Gene3D G3DSA:3.20.20.70 2 242 5.7E-65 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS10585 26d96225dceab42abc2146273630899e 316 SUPERFAMILY SSF51395 1 305 2.01E-70 T 22-04-2016 SCD_RS10585 26d96225dceab42abc2146273630899e 316 Pfam PF01207 Dihydrouridine synthase (Dus) 4 246 3.6E-69 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SCD_RS10585 26d96225dceab42abc2146273630899e 316 PIRSF PIRSF006621 1 314 2.0E-74 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SCD_RS10585 26d96225dceab42abc2146273630899e 316 PANTHER PTHR11082:SF26 1 307 5.3E-126 T 22-04-2016 SCD_RS10585 26d96225dceab42abc2146273630899e 316 PANTHER PTHR11082 1 307 5.3E-126 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SCD_RS06370 0bffe379b9d1a6ab6c49b98191c26a29 161 Gene3D G3DSA:2.40.440.10 2 158 1.5E-25 T 22-04-2016 SCD_RS06370 0bffe379b9d1a6ab6c49b98191c26a29 161 PANTHER PTHR30582 1 158 7.6E-14 T 22-04-2016 SCD_RS06370 0bffe379b9d1a6ab6c49b98191c26a29 161 SUPERFAMILY SSF141523 85 158 6.93E-22 T 22-04-2016 SCD_RS06370 0bffe379b9d1a6ab6c49b98191c26a29 161 SUPERFAMILY SSF141523 2 57 6.93E-22 T 22-04-2016 SCD_RS06370 0bffe379b9d1a6ab6c49b98191c26a29 161 Pfam PF03734 L,D-transpeptidase catalytic domain 3 157 1.2E-15 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 SCD_RS00490 c78428b00e234c3ed1285e221be1c75c 177 Pfam PF04093 rod shape-determining protein MreD 20 158 4.0E-17 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 SCD_RS00490 c78428b00e234c3ed1285e221be1c75c 177 PIRSF PIRSF018472 6 167 9.2E-44 T 22-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type SCD_RS00490 c78428b00e234c3ed1285e221be1c75c 177 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 17 159 1.1E-30 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 SCD_RS00490 c78428b00e234c3ed1285e221be1c75c 177 PANTHER PTHR37484 7 168 8.6E-24 T 22-04-2016 SCD_RS07640 c3339ec370ba80a42d0c1941385e7079 80 SUPERFAMILY SSF101744 2 76 6.28E-10 T 22-04-2016 IPR023534 Rof/RNase P-like SCD_RS07640 c3339ec370ba80a42d0c1941385e7079 80 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 7 76 3.6E-5 T 22-04-2016 IPR009778 Modulator of Rho-dependent transcription termination SCD_RS08290 7bc943f6ed919a5f8dd3ea9795b7f8fe 132 PANTHER PTHR21366:SF4 9 123 3.0E-28 T 22-04-2016 SCD_RS08290 7bc943f6ed919a5f8dd3ea9795b7f8fe 132 Gene3D G3DSA:3.10.180.10 9 123 2.4E-25 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SCD_RS08290 7bc943f6ed919a5f8dd3ea9795b7f8fe 132 SUPERFAMILY SSF54593 4 123 4.3E-23 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SCD_RS08290 7bc943f6ed919a5f8dd3ea9795b7f8fe 132 PANTHER PTHR21366 9 123 3.0E-28 T 22-04-2016 SCD_RS08290 7bc943f6ed919a5f8dd3ea9795b7f8fe 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 120 5.3E-10 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SCD_RS02935 3da0c28bd4909006bf6b7fe9636db50e 257 SUPERFAMILY SSF51366 3 256 1.26E-84 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SCD_RS02935 3da0c28bd4909006bf6b7fe9636db50e 257 PANTHER PTHR21235:SF2 3 257 9.7E-125 T 22-04-2016 SCD_RS02935 3da0c28bd4909006bf6b7fe9636db50e 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 2 256 4.0E-113 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 SCD_RS02935 3da0c28bd4909006bf6b7fe9636db50e 257 Gene3D G3DSA:3.20.20.70 5 257 6.8E-108 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS02935 3da0c28bd4909006bf6b7fe9636db50e 257 PANTHER PTHR21235 3 257 9.7E-125 T 22-04-2016 SCD_RS02935 3da0c28bd4909006bf6b7fe9636db50e 257 Pfam PF00977 Histidine biosynthesis protein 6 239 1.8E-90 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 SCD_RS02935 3da0c28bd4909006bf6b7fe9636db50e 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 256 48.934 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 SCD_RS01735 b701b35e6ed7cd2e85e733b7b0184148 245 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 150 226 1.1E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01735 b701b35e6ed7cd2e85e733b7b0184148 245 SUPERFAMILY SSF46626 53 133 7.35E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01735 b701b35e6ed7cd2e85e733b7b0184148 245 Pfam PF00034 Cytochrome c 58 134 1.1E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01735 b701b35e6ed7cd2e85e733b7b0184148 245 Gene3D G3DSA:1.10.760.10 145 229 5.2E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01735 b701b35e6ed7cd2e85e733b7b0184148 245 SUPERFAMILY SSF46626 144 229 4.15E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01735 b701b35e6ed7cd2e85e733b7b0184148 245 Gene3D G3DSA:1.10.760.10 55 134 7.6E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01735 b701b35e6ed7cd2e85e733b7b0184148 245 PANTHER PTHR33751 55 236 1.7E-34 T 22-04-2016 SCD_RS01735 b701b35e6ed7cd2e85e733b7b0184148 245 PANTHER PTHR33751:SF3 55 236 1.7E-34 T 22-04-2016 SCD_RS11810 cd271ab47b27bae57464b68b76cefb2f 642 Gene3D G3DSA:1.25.40.10 550 610 7.4E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS11810 cd271ab47b27bae57464b68b76cefb2f 642 Gene3D G3DSA:1.25.40.10 453 516 7.4E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS11810 cd271ab47b27bae57464b68b76cefb2f 642 SUPERFAMILY SSF48452 558 609 7.59E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS11810 cd271ab47b27bae57464b68b76cefb2f 642 SUPERFAMILY SSF48452 453 487 7.59E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS03510 2d5c7dd6462592b269e8dfa80807c5cf 404 Gene3D G3DSA:3.30.420.40 206 391 1.0E-70 T 22-04-2016 SCD_RS03510 2d5c7dd6462592b269e8dfa80807c5cf 404 PIRSF PIRSF000722 4 395 5.4E-130 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SCD_RS03510 2d5c7dd6462592b269e8dfa80807c5cf 404 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 8 19 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SCD_RS03510 2d5c7dd6462592b269e8dfa80807c5cf 404 Hamap MF_00020 Acetate kinase [ackA]. 1 396 141.192 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SCD_RS03510 2d5c7dd6462592b269e8dfa80807c5cf 404 Pfam PF00871 Acetokinase family 8 387 1.8E-112 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SCD_RS03510 2d5c7dd6462592b269e8dfa80807c5cf 404 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 204 221 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SCD_RS03510 2d5c7dd6462592b269e8dfa80807c5cf 404 PRINTS PR00471 Acetate kinase family signature 204 225 1.2E-36 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SCD_RS03510 2d5c7dd6462592b269e8dfa80807c5cf 404 PRINTS PR00471 Acetate kinase family signature 322 338 1.2E-36 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SCD_RS03510 2d5c7dd6462592b269e8dfa80807c5cf 404 PRINTS PR00471 Acetate kinase family signature 174 187 1.2E-36 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SCD_RS03510 2d5c7dd6462592b269e8dfa80807c5cf 404 PRINTS PR00471 Acetate kinase family signature 374 386 1.2E-36 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SCD_RS03510 2d5c7dd6462592b269e8dfa80807c5cf 404 PRINTS PR00471 Acetate kinase family signature 300 313 1.2E-36 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SCD_RS03510 2d5c7dd6462592b269e8dfa80807c5cf 404 PRINTS PR00471 Acetate kinase family signature 8 19 1.2E-36 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SCD_RS03510 2d5c7dd6462592b269e8dfa80807c5cf 404 SUPERFAMILY SSF53067 159 393 1.08E-76 T 22-04-2016 SCD_RS03510 2d5c7dd6462592b269e8dfa80807c5cf 404 PANTHER PTHR21060:SF11 4 402 2.1E-144 T 22-04-2016 SCD_RS03510 2d5c7dd6462592b269e8dfa80807c5cf 404 PANTHER PTHR21060 4 402 2.1E-144 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SCD_RS03510 2d5c7dd6462592b269e8dfa80807c5cf 404 Gene3D G3DSA:3.30.420.40 101 205 7.5E-9 T 22-04-2016 SCD_RS03510 2d5c7dd6462592b269e8dfa80807c5cf 404 SUPERFAMILY SSF53067 7 195 1.42E-48 T 22-04-2016 SCD_RS03510 2d5c7dd6462592b269e8dfa80807c5cf 404 TIGRFAM TIGR00016 ackA: acetate kinase 5 392 3.7E-115 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SCD_RS06400 9b6e0ac172e76fd1d3485fb5f3e7f531 328 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 22 33 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SCD_RS06400 9b6e0ac172e76fd1d3485fb5f3e7f531 328 Gene3D G3DSA:3.20.20.70 7 303 2.3E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS06400 9b6e0ac172e76fd1d3485fb5f3e7f531 328 Pfam PF04055 Radical SAM superfamily 21 181 1.0E-29 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SCD_RS06400 9b6e0ac172e76fd1d3485fb5f3e7f531 328 SUPERFAMILY SSF102114 7 277 8.24E-74 T 22-04-2016 SCD_RS06400 9b6e0ac172e76fd1d3485fb5f3e7f531 328 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 7 328 1.8E-112 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SCD_RS06400 9b6e0ac172e76fd1d3485fb5f3e7f531 328 Pfam PF06463 Molybdenum Cofactor Synthesis C 188 312 8.3E-35 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SCD_RS06400 9b6e0ac172e76fd1d3485fb5f3e7f531 328 Pfam PF13353 4Fe-4S single cluster domain 23 85 3.3E-6 T 22-04-2016 SCD_RS06400 9b6e0ac172e76fd1d3485fb5f3e7f531 328 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 7 328 38.361 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SCD_RS06400 9b6e0ac172e76fd1d3485fb5f3e7f531 328 SMART SM00729 16 218 2.0E-11 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SCD_RS06400 9b6e0ac172e76fd1d3485fb5f3e7f531 328 PANTHER PTHR22960 6 283 3.2E-111 T 22-04-2016 SCD_RS15510 7efd2ddc55031595b1e91e830368c570 679 Pfam PF00665 Integrase core domain 266 402 2.8E-9 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SCD_RS15510 7efd2ddc55031595b1e91e830368c570 679 Gene3D G3DSA:3.30.420.10 266 473 5.7E-16 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS15510 7efd2ddc55031595b1e91e830368c570 679 SUPERFAMILY SSF53098 265 466 6.64E-13 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS15510 7efd2ddc55031595b1e91e830368c570 679 Pfam PF09299 Mu transposase, C-terminal 490 558 3.2E-6 T 22-04-2016 IPR015378 Transposase-like, Mu, C-terminal SCD_RS14365 0ac7d9517787543d4064f51e45085105 226 SUPERFAMILY SSF102588 2 223 6.15E-50 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain SCD_RS14365 0ac7d9517787543d4064f51e45085105 226 Pfam PF02585 GlcNAc-PI de-N-acetylase 5 130 6.4E-27 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related SCD_RS14365 0ac7d9517787543d4064f51e45085105 226 PANTHER PTHR12993 2 216 7.3E-27 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related SCD_RS14365 0ac7d9517787543d4064f51e45085105 226 Gene3D G3DSA:3.40.50.10320 2 223 1.3E-55 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain SCD_RS10915 32415aed47bc62c121f373bd40a36dcc 312 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 113 280 7.0E-49 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SCD_RS10915 32415aed47bc62c121f373bd40a36dcc 312 Gene3D G3DSA:1.20.1640.10 124 296 1.8E-26 T 22-04-2016 SCD_RS10915 32415aed47bc62c121f373bd40a36dcc 312 Pfam PF07549 SecD/SecF GG Motif 33 58 1.6E-9 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site SCD_RS10915 32415aed47bc62c121f373bd40a36dcc 312 Pfam PF02355 Protein export membrane protein 109 291 6.3E-63 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SCD_RS10915 32415aed47bc62c121f373bd40a36dcc 312 SUPERFAMILY SSF82866 73 291 1.7E-38 T 22-04-2016 SCD_RS10915 32415aed47bc62c121f373bd40a36dcc 312 PRINTS PR01755 Bacterial translocase SecF protein signature 199 217 1.5E-29 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SCD_RS10915 32415aed47bc62c121f373bd40a36dcc 312 PRINTS PR01755 Bacterial translocase SecF protein signature 231 246 1.5E-29 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SCD_RS10915 32415aed47bc62c121f373bd40a36dcc 312 PRINTS PR01755 Bacterial translocase SecF protein signature 151 165 1.5E-29 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SCD_RS10915 32415aed47bc62c121f373bd40a36dcc 312 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 1.5E-29 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SCD_RS10915 32415aed47bc62c121f373bd40a36dcc 312 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 283 9.7E-77 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 SCD_RS10915 32415aed47bc62c121f373bd40a36dcc 312 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 294 28.845 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 SCD_RS10915 32415aed47bc62c121f373bd40a36dcc 312 PANTHER PTHR30081 8 304 2.1E-74 T 22-04-2016 SCD_RS02830 c776838c3bc8b7a010ff963d28eff75d 401 PANTHER PTHR30012:SF0 2 400 1.4E-105 T 22-04-2016 SCD_RS02830 c776838c3bc8b7a010ff963d28eff75d 401 PANTHER PTHR30012 2 400 1.4E-105 T 22-04-2016 SCD_RS02830 c776838c3bc8b7a010ff963d28eff75d 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 364 378 1.9E-7 T 22-04-2016 IPR003004 GspF/PilC family SCD_RS02830 c776838c3bc8b7a010ff963d28eff75d 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 380 399 1.9E-7 T 22-04-2016 IPR003004 GspF/PilC family SCD_RS02830 c776838c3bc8b7a010ff963d28eff75d 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 160 188 1.9E-7 T 22-04-2016 IPR003004 GspF/PilC family SCD_RS02830 c776838c3bc8b7a010ff963d28eff75d 401 Pfam PF00482 Type II secretion system (T2SS), protein F 65 188 3.9E-23 T 22-04-2016 IPR018076 Type II secretion system F domain SCD_RS02830 c776838c3bc8b7a010ff963d28eff75d 401 Pfam PF00482 Type II secretion system (T2SS), protein F 269 390 2.6E-20 T 22-04-2016 IPR018076 Type II secretion system F domain SCD_RS08815 78273b94ffd5645fd00bb3e1cffd7036 230 Pfam PF00498 FHA domain 23 86 1.2E-16 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 SCD_RS08815 78273b94ffd5645fd00bb3e1cffd7036 230 PANTHER PTHR23308 4 87 3.1E-12 T 22-04-2016 SCD_RS08815 78273b94ffd5645fd00bb3e1cffd7036 230 SMART SM00240 22 72 2.9E-12 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 SCD_RS08815 78273b94ffd5645fd00bb3e1cffd7036 230 Gene3D G3DSA:2.60.200.20 3 92 1.1E-23 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 SCD_RS08815 78273b94ffd5645fd00bb3e1cffd7036 230 Gene3D G3DSA:2.60.200.20 177 227 9.1E-7 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 SCD_RS08815 78273b94ffd5645fd00bb3e1cffd7036 230 SUPERFAMILY SSF49879 2 92 8.23E-26 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 SCD_RS08815 78273b94ffd5645fd00bb3e1cffd7036 230 SUPERFAMILY SSF49879 151 228 1.78E-6 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 SCD_RS09650 373893d68c551866aa5110eea624a213 1302 PANTHER PTHR38690 322 1288 3.5E-171 T 22-04-2016 SCD_RS09650 373893d68c551866aa5110eea624a213 1302 PANTHER PTHR38690 1 286 3.5E-171 T 22-04-2016 SCD_RS09650 373893d68c551866aa5110eea624a213 1302 Pfam PF05170 AsmA family 12 174 1.7E-8 T 22-04-2016 IPR007844 AsmA SCD_RS09650 373893d68c551866aa5110eea624a213 1302 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 11 1290 3.4E-260 T 22-04-2016 IPR011836 Conserved hypothetical protein CHP02099 SCD_RS09650 373893d68c551866aa5110eea624a213 1302 Pfam PF13116 Protein of unknown function 553 828 7.1E-73 T 22-04-2016 IPR025263 Domain of unknown function DUF3971 SCD_RS09650 373893d68c551866aa5110eea624a213 1302 Pfam PF13502 AsmA-like C-terminal region 1045 1286 7.5E-74 T 22-04-2016 IPR032712 AsmA-like, C-terminal SCD_RS07255 1081dc384e8851f5a176385daba975e7 236 SMART SM01079 72 234 1.5E-26 T 22-04-2016 IPR006189 CHASE domain SCD_RS07255 1081dc384e8851f5a176385daba975e7 236 Pfam PF03924 CHASE domain 75 213 8.1E-37 T 22-04-2016 IPR006189 CHASE domain SCD_RS13825 2facf585716280d53e397ffbfe64add7 350 SUPERFAMILY SSF144052 139 345 1.05E-13 T 22-04-2016 SCD_RS02050 1373f6514fdb13b889737f4aaba9c72d 261 Pfam PF01171 PP-loop family 31 200 2.0E-18 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal SCD_RS02050 1373f6514fdb13b889737f4aaba9c72d 261 PANTHER PTHR11807 3 243 4.8E-114 T 22-04-2016 SCD_RS02050 1373f6514fdb13b889737f4aaba9c72d 261 PIRSF PIRSF004976 2 255 1.3E-57 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 SCD_RS02050 1373f6514fdb13b889737f4aaba9c72d 261 PANTHER PTHR11807:SF24 3 243 4.8E-114 T 22-04-2016 SCD_RS02050 1373f6514fdb13b889737f4aaba9c72d 261 SUPERFAMILY SSF52402 17 242 7.33E-49 T 22-04-2016 SCD_RS02050 1373f6514fdb13b889737f4aaba9c72d 261 Gene3D G3DSA:3.40.50.620 18 195 4.7E-18 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SCD_RS10200 c48644e1ae21365b230e33dd1bf91bb0 118 Pfam PF04358 DsrC like protein 16 106 1.1E-28 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE SCD_RS10200 c48644e1ae21365b230e33dd1bf91bb0 118 Gene3D G3DSA:1.10.10.370 42 106 2.5E-22 T 22-04-2016 SCD_RS10200 c48644e1ae21365b230e33dd1bf91bb0 118 PANTHER PTHR37010 16 106 1.2E-23 T 22-04-2016 SCD_RS10200 c48644e1ae21365b230e33dd1bf91bb0 118 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 16 106 3.4E-27 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE SCD_RS10200 c48644e1ae21365b230e33dd1bf91bb0 118 SUPERFAMILY SSF69721 15 107 2.09E-27 T 22-04-2016 IPR025526 DsrC-like domain SCD_RS10200 c48644e1ae21365b230e33dd1bf91bb0 118 PANTHER PTHR37010:SF1 16 106 1.2E-23 T 22-04-2016 SCD_RS10200 c48644e1ae21365b230e33dd1bf91bb0 118 Gene3D G3DSA:3.30.1420.10 17 41 7.2E-4 T 22-04-2016 SCD_RS10165 2d3115efb1ede505769f55a051a427c0 225 PANTHER PTHR26402 1 221 4.7E-79 T 22-04-2016 SCD_RS10165 2d3115efb1ede505769f55a051a427c0 225 Gene3D G3DSA:1.10.10.10 124 220 1.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS10165 2d3115efb1ede505769f55a051a427c0 225 PANTHER PTHR26402:SF518 1 221 4.7E-79 T 22-04-2016 SCD_RS10165 2d3115efb1ede505769f55a051a427c0 225 SUPERFAMILY SSF52172 1 171 9.53E-42 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS10165 2d3115efb1ede505769f55a051a427c0 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 218 7.5E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SCD_RS10165 2d3115efb1ede505769f55a051a427c0 225 Pfam PF00072 Response regulator receiver domain 3 112 5.5E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS10165 2d3115efb1ede505769f55a051a427c0 225 SMART SM00862 145 218 6.8E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SCD_RS10165 2d3115efb1ede505769f55a051a427c0 225 SMART SM00448 1 112 1.5E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS10165 2d3115efb1ede505769f55a051a427c0 225 Gene3D G3DSA:3.40.50.2300 1 123 1.2E-39 T 22-04-2016 SCD_RS07040 babd0d93a4730f6959ddb244d5b5100d 388 Gene3D G3DSA:2.40.50.100 63 94 6.3E-16 T 22-04-2016 SCD_RS07040 babd0d93a4730f6959ddb244d5b5100d 388 Gene3D G3DSA:2.40.50.100 197 229 6.3E-16 T 22-04-2016 SCD_RS07040 babd0d93a4730f6959ddb244d5b5100d 388 SUPERFAMILY SSF111369 53 308 5.49E-12 T 22-04-2016 SCD_RS07040 babd0d93a4730f6959ddb244d5b5100d 388 PANTHER PTHR32347:SF16 14 386 1.7E-58 T 22-04-2016 SCD_RS07040 babd0d93a4730f6959ddb244d5b5100d 388 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 384 1.7E-47 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SCD_RS07040 babd0d93a4730f6959ddb244d5b5100d 388 PANTHER PTHR32347 14 386 1.7E-58 T 22-04-2016 SCD_RS07040 babd0d93a4730f6959ddb244d5b5100d 388 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 284 1.5E-15 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SCD_RS11415 bd31aa4715ca41594ac55a16b4d44fd0 463 Pfam PF00672 HAMP domain 167 229 3.4E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS11415 bd31aa4715ca41594ac55a16b4d44fd0 463 SMART SM00388 235 300 3.2E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS11415 bd31aa4715ca41594ac55a16b4d44fd0 463 Gene3D G3DSA:3.30.565.10 305 454 2.3E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS11415 bd31aa4715ca41594ac55a16b4d44fd0 463 SUPERFAMILY SSF47384 218 298 2.55E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS11415 bd31aa4715ca41594ac55a16b4d44fd0 463 SUPERFAMILY SSF55874 289 457 3.01E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS11415 bd31aa4715ca41594ac55a16b4d44fd0 463 PANTHER PTHR24423:SF474 176 452 2.1E-63 T 22-04-2016 SCD_RS11415 bd31aa4715ca41594ac55a16b4d44fd0 463 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 298 1.1E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS11415 bd31aa4715ca41594ac55a16b4d44fd0 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 410 1.3E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS11415 bd31aa4715ca41594ac55a16b4d44fd0 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 452 1.3E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS11415 bd31aa4715ca41594ac55a16b4d44fd0 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 1.3E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS11415 bd31aa4715ca41594ac55a16b4d44fd0 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 432 1.3E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS11415 bd31aa4715ca41594ac55a16b4d44fd0 463 Gene3D G3DSA:1.10.287.130 230 296 4.2E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SCD_RS11415 bd31aa4715ca41594ac55a16b4d44fd0 463 SMART SM00387 345 455 9.2E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS11415 bd31aa4715ca41594ac55a16b4d44fd0 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 448 5.5E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS11415 bd31aa4715ca41594ac55a16b4d44fd0 463 PANTHER PTHR24423 176 452 2.1E-63 T 22-04-2016 SCD_RS11415 bd31aa4715ca41594ac55a16b4d44fd0 463 Pfam PF08521 Two-component sensor kinase N-terminal 19 158 7.1E-37 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal SCD_RS10595 a74e5a83566b4bb7015246826458c1a6 182 PANTHER PTHR31721 1 180 8.0E-33 T 22-04-2016 SCD_RS10595 a74e5a83566b4bb7015246826458c1a6 182 Pfam PF03350 Uncharacterized protein family, UPF0114 10 138 8.4E-31 T 22-04-2016 IPR005134 Uncharacterised protein family UPF0114 SCD_RS10595 a74e5a83566b4bb7015246826458c1a6 182 PIRSF PIRSF026509 1 182 4.4E-37 T 22-04-2016 IPR005134 Uncharacterised protein family UPF0114 SCD_RS03835 32c2d997b36ab0537373604f095741ac 369 PIRSF PIRSF005622 1 368 3.2E-164 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 SCD_RS03835 32c2d997b36ab0537373604f095741ac 369 Pfam PF01924 Hydrogenase formation hypA family 12 363 3.3E-160 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 SCD_RS03835 32c2d997b36ab0537373604f095741ac 369 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 365 3.4E-151 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 SCD_RS03835 32c2d997b36ab0537373604f095741ac 369 PANTHER PTHR30149 2 366 8.8E-202 T 22-04-2016 SCD_RS03835 32c2d997b36ab0537373604f095741ac 369 PANTHER PTHR30149:SF0 2 366 8.8E-202 T 22-04-2016 SCD_RS00725 cbb8f258919f23e9102d6c7347825d5c 495 PANTHER PTHR11808 80 494 5.8E-167 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SCD_RS00725 cbb8f258919f23e9102d6c7347825d5c 495 SUPERFAMILY SSF53383 131 494 1.29E-104 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS00725 cbb8f258919f23e9102d6c7347825d5c 495 Gene3D G3DSA:3.40.640.10 114 361 7.9E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS00725 cbb8f258919f23e9102d6c7347825d5c 495 Gene3D G3DSA:3.90.1150.10 363 494 2.0E-48 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS00725 cbb8f258919f23e9102d6c7347825d5c 495 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 116 494 1.5E-123 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SCD_RS00725 cbb8f258919f23e9102d6c7347825d5c 495 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 305 319 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SCD_RS10030 d61554d749f4f159ead4b82296810c18 353 Pfam PF08936 Carboxysome Shell Carbonic Anhydrase 100 174 1.4E-7 T 22-04-2016 IPR014074 Carboxysome shell carbonic anhydrase SCD_RS10030 d61554d749f4f159ead4b82296810c18 353 Gene3D G3DSA:3.40.1050.10 35 96 3.7E-5 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SCD_RS09775 3aef341179a43ae0ba70c397ca69ef7f 287 Pfam PF00263 Bacterial type II and III secretion system protein 156 261 5.2E-8 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 SCD_RS00920 76155192de3d3f0451d002946b06ef76 169 Gene3D G3DSA:1.10.10.10 96 158 2.6E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS00920 76155192de3d3f0451d002946b06ef76 169 Pfam PF08281 Sigma-70, region 4 102 153 9.6E-15 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS00920 76155192de3d3f0451d002946b06ef76 169 SUPERFAMILY SSF88659 98 157 3.92E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS00920 76155192de3d3f0451d002946b06ef76 169 SUPERFAMILY SSF88946 3 88 9.81E-21 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS00920 76155192de3d3f0451d002946b06ef76 169 Gene3D G3DSA:1.10.1740.10 2 73 2.5E-24 T 22-04-2016 SCD_RS00920 76155192de3d3f0451d002946b06ef76 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 2 156 6.0E-25 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS00920 76155192de3d3f0451d002946b06ef76 169 PANTHER PTHR30173 2 159 1.4E-35 T 22-04-2016 SCD_RS00920 76155192de3d3f0451d002946b06ef76 169 PANTHER PTHR30173:SF6 2 159 1.4E-35 T 22-04-2016 SCD_RS00920 76155192de3d3f0451d002946b06ef76 169 Pfam PF04542 Sigma-70 region 2 7 73 9.8E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS03350 341faac3816112593e3ea0edaf0136c4 226 TIGRFAM TIGR02796 tolQ: protein TolQ 8 222 3.4E-88 T 22-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 SCD_RS03350 341faac3816112593e3ea0edaf0136c4 226 PANTHER PTHR30625:SF3 5 223 1.1E-66 T 22-04-2016 SCD_RS03350 341faac3816112593e3ea0edaf0136c4 226 Pfam PF01618 MotA/TolQ/ExbB proton channel family 82 210 1.8E-41 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SCD_RS03350 341faac3816112593e3ea0edaf0136c4 226 PANTHER PTHR30625 5 223 1.1E-66 T 22-04-2016 SCD_RS01885 2def692676d965292e9877e877cc830e 155 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 30 149 8.9E-42 T 22-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB SCD_RS01885 2def692676d965292e9877e877cc830e 155 Gene3D G3DSA:4.10.1020.10 69 136 7.5E-27 T 22-04-2016 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain SCD_RS01885 2def692676d965292e9877e877cc830e 155 PIRSF PIRSF006105 5 155 1.3E-46 T 22-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB SCD_RS01885 2def692676d965292e9877e877cc830e 155 PANTHER PTHR38604:SF1 1 155 5.1E-36 T 22-04-2016 SCD_RS01885 2def692676d965292e9877e877cc830e 155 PANTHER PTHR38604 1 155 5.1E-36 T 22-04-2016 SCD_RS01885 2def692676d965292e9877e877cc830e 155 SUPERFAMILY SSF48695 43 152 4.89E-35 T 22-04-2016 IPR011031 Multihaem cytochrome SCD_RS10760 2af1089db48b5d681fb957a3b6dd4a93 120 PANTHER PTHR12789 36 106 1.4E-19 T 22-04-2016 SCD_RS10760 2af1089db48b5d681fb957a3b6dd4a93 120 PIRSF PIRSF037511 2 120 2.1E-34 T 22-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 SCD_RS10760 2af1089db48b5d681fb957a3b6dd4a93 120 Pfam PF01253 Translation initiation factor SUI1 43 112 3.9E-17 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 SCD_RS10760 2af1089db48b5d681fb957a3b6dd4a93 120 SUPERFAMILY SSF55159 9 117 1.44E-28 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 SCD_RS10760 2af1089db48b5d681fb957a3b6dd4a93 120 Gene3D G3DSA:3.30.780.10 41 120 1.3E-30 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 SCD_RS10760 2af1089db48b5d681fb957a3b6dd4a93 120 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 10 120 9.7E-35 T 22-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 SCD_RS12175 b8cab33c903b26a7cd7b3b6b6eb78ad4 275 PANTHER PTHR38034 11 274 2.7E-50 T 22-04-2016 SCD_RS12175 b8cab33c903b26a7cd7b3b6b6eb78ad4 275 Pfam PF01578 Cytochrome C assembly protein 53 272 1.1E-30 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SCD_RS00615 12b3cf0cfcd875cc50b4644f61ebd912 482 Gene3D G3DSA:3.40.50.720 179 363 1.2E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS00615 12b3cf0cfcd875cc50b4644f61ebd912 482 PANTHER PTHR10953 184 358 5.1E-25 T 22-04-2016 SCD_RS00615 12b3cf0cfcd875cc50b4644f61ebd912 482 SUPERFAMILY SSF69572 175 460 6.8E-40 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SCD_RS00615 12b3cf0cfcd875cc50b4644f61ebd912 482 Pfam PF00899 ThiF family 185 447 6.2E-34 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SCD_RS00615 12b3cf0cfcd875cc50b4644f61ebd912 482 Pfam PF14464 Prokaryotic homologs of the JAB domain 10 130 3.7E-6 T 22-04-2016 IPR028090 JAB domain, prokaryotic SCD_RS07755 cbf84f78f1bb26bb5ae2bc85be6a3523 156 PRINTS PR01415 Ankyrin repeat signature 105 119 4.3E-6 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS07755 cbf84f78f1bb26bb5ae2bc85be6a3523 156 PRINTS PR01415 Ankyrin repeat signature 57 72 4.3E-6 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS07755 cbf84f78f1bb26bb5ae2bc85be6a3523 156 Gene3D G3DSA:1.25.40.20 26 137 2.4E-29 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SCD_RS07755 cbf84f78f1bb26bb5ae2bc85be6a3523 156 Pfam PF12796 Ankyrin repeats (3 copies) 29 120 1.5E-16 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SCD_RS07755 cbf84f78f1bb26bb5ae2bc85be6a3523 156 SMART SM00248 56 85 1.5E-5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS07755 cbf84f78f1bb26bb5ae2bc85be6a3523 156 SMART SM00248 89 118 1.1E-5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS07755 cbf84f78f1bb26bb5ae2bc85be6a3523 156 SUPERFAMILY SSF48403 27 142 2.49E-29 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SCD_RS07755 cbf84f78f1bb26bb5ae2bc85be6a3523 156 PANTHER PTHR24193 27 142 1.4E-28 T 22-04-2016 SCD_RS02395 6bc3571780f10074fda108470e447811 569 Pfam PF07556 Protein of unknown function (DUF1538) 66 289 4.5E-54 T 22-04-2016 IPR011435 Protein of unknown function DUF1538 SCD_RS02395 6bc3571780f10074fda108470e447811 569 Pfam PF07556 Protein of unknown function (DUF1538) 332 553 2.2E-66 T 22-04-2016 IPR011435 Protein of unknown function DUF1538 SCD_RS10680 e9691137f1c248144d1707e2ba227d53 151 PANTHER PTHR33164 12 150 2.6E-25 T 22-04-2016 SCD_RS10680 e9691137f1c248144d1707e2ba227d53 151 SUPERFAMILY SSF46785 9 141 1.0E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS10680 e9691137f1c248144d1707e2ba227d53 151 Gene3D G3DSA:1.10.10.10 10 140 2.1E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS10680 e9691137f1c248144d1707e2ba227d53 151 Pfam PF01047 MarR family 33 90 6.5E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SCD_RS10680 e9691137f1c248144d1707e2ba227d53 151 SMART SM00347 26 126 4.6E-20 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SCD_RS10965 053c90c36012f02c35ffbed53e5a8bc5 375 SMART SM00283 28 265 3.0E-20 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SCD_RS10965 053c90c36012f02c35ffbed53e5a8bc5 375 PANTHER PTHR32089:SF28 100 243 1.1E-51 T 22-04-2016 SCD_RS10965 053c90c36012f02c35ffbed53e5a8bc5 375 Gene3D G3DSA:1.10.287.950 67 245 2.0E-46 T 22-04-2016 SCD_RS10965 053c90c36012f02c35ffbed53e5a8bc5 375 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 93 244 1.6E-38 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SCD_RS10965 053c90c36012f02c35ffbed53e5a8bc5 375 SUPERFAMILY SSF58104 48 249 4.71E-49 T 22-04-2016 SCD_RS10965 053c90c36012f02c35ffbed53e5a8bc5 375 PANTHER PTHR32089 100 243 1.1E-51 T 22-04-2016 SCD_RS10965 053c90c36012f02c35ffbed53e5a8bc5 375 Pfam PF13682 Chemoreceptor zinc-binding domain 259 325 4.5E-12 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SCD_RS02100 844f20776dcd3e8c6f67b10c99ba6037 103 PANTHER PTHR38471:SF2 1 102 5.0E-29 T 22-04-2016 SCD_RS02100 844f20776dcd3e8c6f67b10c99ba6037 103 PANTHER PTHR38471 1 102 5.0E-29 T 22-04-2016 SCD_RS02100 844f20776dcd3e8c6f67b10c99ba6037 103 SUPERFAMILY SSF158446 2 102 1.44E-30 T 22-04-2016 SCD_RS02100 844f20776dcd3e8c6f67b10c99ba6037 103 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 2 101 5.0E-33 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SCD_RS02100 844f20776dcd3e8c6f67b10c99ba6037 103 Pfam PF05635 23S rRNA-intervening sequence protein 2 93 5.2E-31 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SCD_RS02100 844f20776dcd3e8c6f67b10c99ba6037 103 Gene3D G3DSA:1.20.1440.60 2 102 2.1E-29 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SCD_RS14540 6867c3af2b1da163dbb09a73bd0d4be6 257 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 18 253 31.317 T 22-04-2016 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 SCD_RS14540 6867c3af2b1da163dbb09a73bd0d4be6 257 Gene3D G3DSA:2.30.110.10 24 131 1.3E-16 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SCD_RS14540 6867c3af2b1da163dbb09a73bd0d4be6 257 Pfam PF07238 PilZ domain 131 243 5.0E-11 T 22-04-2016 IPR009875 PilZ domain GO:0035438 SCD_RS14540 6867c3af2b1da163dbb09a73bd0d4be6 257 Pfam PF07317 Flagellar regulator YcgR 23 128 1.8E-29 T 22-04-2016 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal SCD_RS14540 6867c3af2b1da163dbb09a73bd0d4be6 257 Gene3D G3DSA:2.40.10.220 132 253 3.7E-20 T 22-04-2016 SCD_RS14540 6867c3af2b1da163dbb09a73bd0d4be6 257 SUPERFAMILY SSF141371 132 255 2.94E-5 T 22-04-2016 SCD_RS07705 fc0c8e2e1e0467bc4a3100d224ab8f38 112 PANTHER PTHR30305 2 112 1.1E-79 T 22-04-2016 SCD_RS07705 fc0c8e2e1e0467bc4a3100d224ab8f38 112 SUPERFAMILY SSF57783 3 33 1.29E-13 T 22-04-2016 SCD_RS07705 fc0c8e2e1e0467bc4a3100d224ab8f38 112 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 111 1.9E-49 T 22-04-2016 IPR004624 PhnA protein SCD_RS07705 fc0c8e2e1e0467bc4a3100d224ab8f38 112 Gene3D G3DSA:2.30.30.40 44 112 1.5E-36 T 22-04-2016 SCD_RS07705 fc0c8e2e1e0467bc4a3100d224ab8f38 112 SUPERFAMILY SSF82057 40 112 1.51E-28 T 22-04-2016 SCD_RS07705 fc0c8e2e1e0467bc4a3100d224ab8f38 112 Pfam PF08274 PhnA Zinc-Ribbon 3 32 7.3E-18 T 22-04-2016 IPR013987 PhnA protein, N-terminal SCD_RS07705 fc0c8e2e1e0467bc4a3100d224ab8f38 112 Gene3D G3DSA:2.20.25.10 1 40 4.9E-22 T 22-04-2016 SCD_RS07705 fc0c8e2e1e0467bc4a3100d224ab8f38 112 Pfam PF03831 PhnA domain 46 112 1.5E-32 T 22-04-2016 IPR013988 PhnA protein, C-terminal SCD_RS08050 dc645bf5236443fb5dffa829c9b4ae2d 168 SUPERFAMILY SSF111384 24 165 3.4E-35 T 22-04-2016 IPR024930 Skp domain SCD_RS08050 dc645bf5236443fb5dffa829c9b4ae2d 168 PIRSF PIRSF002094 2 168 1.0E-53 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 SCD_RS08050 dc645bf5236443fb5dffa829c9b4ae2d 168 PANTHER PTHR35089 4 168 2.2E-37 T 22-04-2016 SCD_RS08050 dc645bf5236443fb5dffa829c9b4ae2d 168 PANTHER PTHR35089:SF1 4 168 2.2E-37 T 22-04-2016 SCD_RS08050 dc645bf5236443fb5dffa829c9b4ae2d 168 SMART SM00935 14 166 3.8E-56 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 SCD_RS08050 dc645bf5236443fb5dffa829c9b4ae2d 168 Gene3D G3DSA:3.30.910.20 17 63 1.1E-31 T 22-04-2016 SCD_RS08050 dc645bf5236443fb5dffa829c9b4ae2d 168 Gene3D G3DSA:3.30.910.20 101 165 1.1E-31 T 22-04-2016 SCD_RS08050 dc645bf5236443fb5dffa829c9b4ae2d 168 Pfam PF03938 Outer membrane protein (OmpH-like) 12 165 7.0E-35 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 SCD_RS13525 2dd68aa18b5aabdfbbca206ae143bf54 174 PANTHER PTHR10681:SF107 2 173 8.8E-51 T 22-04-2016 SCD_RS13525 2dd68aa18b5aabdfbbca206ae143bf54 174 Gene3D G3DSA:3.40.30.10 1 172 1.1E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS13525 2dd68aa18b5aabdfbbca206ae143bf54 174 SUPERFAMILY SSF52833 39 172 3.32E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS13525 2dd68aa18b5aabdfbbca206ae143bf54 174 Pfam PF08534 Redoxin 35 159 2.3E-15 T 22-04-2016 IPR013740 Redoxin GO:0016491 SCD_RS13525 2dd68aa18b5aabdfbbca206ae143bf54 174 PANTHER PTHR10681 2 173 8.8E-51 T 22-04-2016 SCD_RS13525 2dd68aa18b5aabdfbbca206ae143bf54 174 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 5 169 1.1E-51 T 22-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 SCD_RS06215 4679c452c3f4b48ab7308ded1a1899f1 163 Pfam PF02082 Transcriptional regulator 1 83 1.5E-26 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type SCD_RS06215 4679c452c3f4b48ab7308ded1a1899f1 163 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 1.4E-64 T 22-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 SCD_RS06215 4679c452c3f4b48ab7308ded1a1899f1 163 Gene3D G3DSA:1.10.10.10 1 134 4.1E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS06215 4679c452c3f4b48ab7308ded1a1899f1 163 PANTHER PTHR33221 2 152 3.9E-57 T 22-04-2016 SCD_RS06215 4679c452c3f4b48ab7308ded1a1899f1 163 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 3.6E-44 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type SCD_RS06215 4679c452c3f4b48ab7308ded1a1899f1 163 PANTHER PTHR33221:SF1 2 152 3.9E-57 T 22-04-2016 SCD_RS06215 4679c452c3f4b48ab7308ded1a1899f1 163 SUPERFAMILY SSF46785 2 132 1.82E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS00220 f6b90cb1bcbcb11aebe8447497b9e8a3 205 PIRSF PIRSF002884 1 205 2.1E-61 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- SCD_RS00220 f6b90cb1bcbcb11aebe8447497b9e8a3 205 SUPERFAMILY SSF75708 13 204 1.03E-50 T 22-04-2016 SCD_RS00220 f6b90cb1bcbcb11aebe8447497b9e8a3 205 Gene3D G3DSA:1.10.287.500 34 161 2.5E-39 T 22-04-2016 SCD_RS00220 f6b90cb1bcbcb11aebe8447497b9e8a3 205 PANTHER PTHR22617:SF32 22 205 7.0E-38 T 22-04-2016 SCD_RS00220 f6b90cb1bcbcb11aebe8447497b9e8a3 205 PANTHER PTHR22617 22 205 7.0E-38 T 22-04-2016 SCD_RS00220 f6b90cb1bcbcb11aebe8447497b9e8a3 205 Pfam PF04344 Chemotaxis phosphatase, CheZ 16 205 4.3E-64 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- SCD_RS07295 8790a8689357ec379e7f69735838b830 100 Gene3D G3DSA:3.30.70.1060 1 98 2.7E-35 T 22-04-2016 SCD_RS07295 8790a8689357ec379e7f69735838b830 100 PANTHER PTHR33606 1 98 9.7E-31 T 22-04-2016 SCD_RS07295 8790a8689357ec379e7f69735838b830 100 SUPERFAMILY SSF54909 1 97 1.5E-30 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel SCD_RS07295 8790a8689357ec379e7f69735838b830 100 Pfam PF03795 YCII-related domain 1 95 1.4E-26 T 22-04-2016 IPR005545 YCII-related SCD_RS07920 5c13e38290a1cfa4901c7557e707f940 493 Pfam PF00374 Nickel-dependent hydrogenase 52 128 8.6E-18 T 22-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SCD_RS07920 5c13e38290a1cfa4901c7557e707f940 493 Pfam PF00374 Nickel-dependent hydrogenase 266 461 1.3E-14 T 22-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SCD_RS07920 5c13e38290a1cfa4901c7557e707f940 493 PANTHER PTHR11993:SF9 148 216 2.3E-152 T 22-04-2016 SCD_RS07920 5c13e38290a1cfa4901c7557e707f940 493 PANTHER PTHR11993:SF9 12 129 2.3E-152 T 22-04-2016 SCD_RS07920 5c13e38290a1cfa4901c7557e707f940 493 PANTHER PTHR11993:SF9 272 468 2.3E-152 T 22-04-2016 SCD_RS07920 5c13e38290a1cfa4901c7557e707f940 493 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 52 77 - T 22-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 SCD_RS07920 5c13e38290a1cfa4901c7557e707f940 493 SUPERFAMILY SSF56762 15 461 1.09E-126 T 22-04-2016 IPR029014 NiFe hydrogenase-like SCD_RS07920 5c13e38290a1cfa4901c7557e707f940 493 PANTHER PTHR11993 148 216 2.3E-152 T 22-04-2016 SCD_RS07920 5c13e38290a1cfa4901c7557e707f940 493 PANTHER PTHR11993 12 129 2.3E-152 T 22-04-2016 SCD_RS07920 5c13e38290a1cfa4901c7557e707f940 493 PANTHER PTHR11993 272 468 2.3E-152 T 22-04-2016 SCD_RS07920 5c13e38290a1cfa4901c7557e707f940 493 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 452 461 - T 22-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 SCD_RS07920 5c13e38290a1cfa4901c7557e707f940 493 Gene3D G3DSA:1.10.645.10 10 461 1.2E-116 T 22-04-2016 IPR029014 NiFe hydrogenase-like SCD_RS11260 73e9bc816a94df4148984ed6a9c87bc3 240 SUPERFAMILY SSF55120 102 239 2.88E-21 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS11260 73e9bc816a94df4148984ed6a9c87bc3 240 Gene3D G3DSA:3.10.290.10 3 66 3.5E-17 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS11260 73e9bc816a94df4148984ed6a9c87bc3 240 SUPERFAMILY SSF55174 5 74 4.19E-11 T 22-04-2016 SCD_RS11260 73e9bc816a94df4148984ed6a9c87bc3 240 SMART SM00363 5 71 4.8E-4 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS11260 73e9bc816a94df4148984ed6a9c87bc3 240 PANTHER PTHR21600:SF21 1 240 2.7E-93 T 22-04-2016 SCD_RS11260 73e9bc816a94df4148984ed6a9c87bc3 240 PANTHER PTHR21600 1 240 2.7E-93 T 22-04-2016 SCD_RS11260 73e9bc816a94df4148984ed6a9c87bc3 240 Pfam PF01479 S4 domain 5 46 1.8E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS12745 10649974fbe944484db7f4dfb500680b 296 PANTHER PTHR32322:SF9 1 295 4.1E-37 T 22-04-2016 SCD_RS12745 10649974fbe944484db7f4dfb500680b 296 PANTHER PTHR32322 1 295 4.1E-37 T 22-04-2016 SCD_RS12745 10649974fbe944484db7f4dfb500680b 296 Pfam PF00892 EamA-like transporter family 145 274 1.0E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SCD_RS12745 10649974fbe944484db7f4dfb500680b 296 SUPERFAMILY SSF103481 196 277 6.15E-11 T 22-04-2016 SCD_RS12745 10649974fbe944484db7f4dfb500680b 296 SUPERFAMILY SSF103481 42 138 3.01E-5 T 22-04-2016 SCD_RS00525 81f2e3d2842c99757d5152a0a0f30970 218 PANTHER PTHR10993 20 197 2.5E-71 T 22-04-2016 SCD_RS00525 81f2e3d2842c99757d5152a0a0f30970 218 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 86 101 - T 22-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SCD_RS00525 81f2e3d2842c99757d5152a0a0f30970 218 SUPERFAMILY SSF55681 21 210 7.54E-66 T 22-04-2016 SCD_RS00525 81f2e3d2842c99757d5152a0a0f30970 218 Gene3D G3DSA:3.90.1550.10 20 217 2.4E-67 T 22-04-2016 SCD_RS00525 81f2e3d2842c99757d5152a0a0f30970 218 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 90 143 5.0E-15 T 22-04-2016 SCD_RS00525 81f2e3d2842c99757d5152a0a0f30970 218 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 42 204 1.8E-58 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SCD_RS00525 81f2e3d2842c99757d5152a0a0f30970 218 Hamap MF_00013 Octanoyltransferase [lipB]. 20 217 36.59 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SCD_RS00525 81f2e3d2842c99757d5152a0a0f30970 218 Pfam PF03099 Biotin/lipoate A/B protein ligase family 75 174 3.3E-7 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 SCD_RS00525 81f2e3d2842c99757d5152a0a0f30970 218 PIRSF PIRSF016262 17 218 1.6E-57 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SCD_RS01385 db17256451489f36ffa87acb2d195ecd 138 PANTHER PTHR23089 20 114 1.0E-20 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SCD_RS01385 db17256451489f36ffa87acb2d195ecd 138 PIRSF PIRSF000714 1 136 9.6E-43 T 22-04-2016 IPR026026 Histidine triad hydrolase, Hint-type SCD_RS01385 db17256451489f36ffa87acb2d195ecd 138 PANTHER PTHR23089:SF13 20 114 1.0E-20 T 22-04-2016 SCD_RS01385 db17256451489f36ffa87acb2d195ecd 138 Gene3D G3DSA:3.30.428.10 2 123 1.4E-38 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SCD_RS01385 db17256451489f36ffa87acb2d195ecd 138 Pfam PF01230 HIT domain 14 94 4.7E-13 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SCD_RS01385 db17256451489f36ffa87acb2d195ecd 138 SUPERFAMILY SSF54197 2 130 1.7E-35 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SCD_RS13315 9f5b45cae4372d4aaf455e9142eae6cb 85 Gene3D G3DSA:3.40.30.10 1 74 2.2E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS13315 9f5b45cae4372d4aaf455e9142eae6cb 85 PANTHER PTHR10168 12 85 1.2E-17 T 22-04-2016 SCD_RS13315 9f5b45cae4372d4aaf455e9142eae6cb 85 SUPERFAMILY SSF52833 1 84 4.0E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS13315 9f5b45cae4372d4aaf455e9142eae6cb 85 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 2.6E-31 T 22-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 SCD_RS13315 9f5b45cae4372d4aaf455e9142eae6cb 85 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 SCD_RS13315 9f5b45cae4372d4aaf455e9142eae6cb 85 PRINTS PR00160 Glutaredoxin signature 61 74 2.97E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup SCD_RS13315 9f5b45cae4372d4aaf455e9142eae6cb 85 PRINTS PR00160 Glutaredoxin signature 47 60 2.97E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup SCD_RS13315 9f5b45cae4372d4aaf455e9142eae6cb 85 PRINTS PR00160 Glutaredoxin signature 4 22 2.97E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup SCD_RS13315 9f5b45cae4372d4aaf455e9142eae6cb 85 Pfam PF00462 Glutaredoxin 4 64 9.1E-15 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 SCD_RS14715 50505e28b2c54a4e13eb529744530424 303 Pfam PF00535 Glycosyl transferase family 2 7 168 1.9E-32 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SCD_RS14715 50505e28b2c54a4e13eb529744530424 303 Gene3D G3DSA:3.90.550.10 5 227 4.0E-62 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS14715 50505e28b2c54a4e13eb529744530424 303 PANTHER PTHR22916 5 281 7.2E-59 T 22-04-2016 SCD_RS14715 50505e28b2c54a4e13eb529744530424 303 Gene3D G3DSA:1.25.40.10 228 298 7.3E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS14715 50505e28b2c54a4e13eb529744530424 303 SUPERFAMILY SSF48452 230 300 1.69E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS14715 50505e28b2c54a4e13eb529744530424 303 SUPERFAMILY SSF53448 5 223 2.25E-59 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS00315 97b66f56e7621f435d4f5a05b5ca5034 483 PANTHER PTHR30001 1 483 1.7E-193 T 22-04-2016 SCD_RS00315 97b66f56e7621f435d4f5a05b5ca5034 483 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 420 1.5E-150 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 SCD_RS00315 97b66f56e7621f435d4f5a05b5ca5034 483 Pfam PF00575 S1 RNA binding domain 38 103 2.3E-4 T 22-04-2016 IPR003029 S1 domain GO:0003676 SCD_RS00315 97b66f56e7621f435d4f5a05b5ca5034 483 SMART SM00316 37 114 1.3E-6 T 22-04-2016 IPR022967 RNA-binding domain, S1 SCD_RS00315 97b66f56e7621f435d4f5a05b5ca5034 483 SUPERFAMILY SSF50249 39 120 3.66E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS00315 97b66f56e7621f435d4f5a05b5ca5034 483 Pfam PF10150 Ribonuclease E/G family 116 387 9.2E-101 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 SCD_RS00315 97b66f56e7621f435d4f5a05b5ca5034 483 Gene3D G3DSA:2.40.50.140 30 120 1.9E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS14720 da3764f6999365b6ffdc379b309aed15 314 Pfam PF00535 Glycosyl transferase family 2 5 137 3.4E-28 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SCD_RS14720 da3764f6999365b6ffdc379b309aed15 314 Gene3D G3DSA:3.90.550.10 2 230 1.9E-44 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS14720 da3764f6999365b6ffdc379b309aed15 314 PANTHER PTHR22916 158 309 1.3E-41 T 22-04-2016 SCD_RS14720 da3764f6999365b6ffdc379b309aed15 314 PANTHER PTHR22916 1 137 1.3E-41 T 22-04-2016 SCD_RS14720 da3764f6999365b6ffdc379b309aed15 314 SUPERFAMILY SSF53448 2 227 9.38E-42 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS05020 3965418b770f0a0cd8e62d2acbc9fc8d 121 PANTHER PTHR33653:SF2 1 108 2.8E-12 T 22-04-2016 SCD_RS05020 3965418b770f0a0cd8e62d2acbc9fc8d 121 SUPERFAMILY SSF88723 2 110 2.07E-23 T 22-04-2016 IPR029060 PIN domain-like SCD_RS05020 3965418b770f0a0cd8e62d2acbc9fc8d 121 Gene3D G3DSA:3.40.50.1010 3 110 3.0E-23 T 22-04-2016 IPR029060 PIN domain-like SCD_RS05020 3965418b770f0a0cd8e62d2acbc9fc8d 121 PANTHER PTHR33653 1 108 2.8E-12 T 22-04-2016 SCD_RS05020 3965418b770f0a0cd8e62d2acbc9fc8d 121 Pfam PF01850 PIN domain 5 106 1.2E-12 T 22-04-2016 IPR002716 PIN domain SCD_RS09755 dcd7a3680254c032db0b6d87be1f058d 359 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 10 345 4.7E-117 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 SCD_RS09755 dcd7a3680254c032db0b6d87be1f058d 359 PANTHER PTHR30578:SF0 9 352 3.2E-122 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 SCD_RS09755 dcd7a3680254c032db0b6d87be1f058d 359 Pfam PF03116 NQR2, RnfD, RnfE family 8 344 2.6E-110 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 SCD_RS09755 dcd7a3680254c032db0b6d87be1f058d 359 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 5 346 27.24 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 SCD_RS09755 dcd7a3680254c032db0b6d87be1f058d 359 PANTHER PTHR30578 9 352 3.2E-122 T 22-04-2016 SCD_RS11630 9e53a1bc10a66bf27258e5890f267814 357 SUPERFAMILY SSF53756 8 334 1.11E-15 T 22-04-2016 SCD_RS11630 9e53a1bc10a66bf27258e5890f267814 357 PANTHER PTHR38134 1 357 8.3E-14 T 22-04-2016 SCD_RS11630 9e53a1bc10a66bf27258e5890f267814 357 Gene3D G3DSA:3.40.50.2000 198 332 6.8E-9 T 22-04-2016 SCD_RS03500 9f758fd68dab43745853949f4dd50b7e 411 Pfam PF00999 Sodium/hydrogen exchanger family 9 404 3.4E-62 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SCD_RS03500 9f758fd68dab43745853949f4dd50b7e 411 PANTHER PTHR10110 1 408 1.8E-87 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 SCD_RS03500 9f758fd68dab43745853949f4dd50b7e 411 PANTHER PTHR10110:SF86 1 408 1.8E-87 T 22-04-2016 SCD_RS07065 ec4988e9d93f9a054e384990cb07f7c8 83 SUPERFAMILY SSF143120 10 74 1.7E-9 T 22-04-2016 SCD_RS07065 ec4988e9d93f9a054e384990cb07f7c8 83 PANTHER PTHR33713:SF5 1 83 2.7E-16 T 22-04-2016 SCD_RS07065 ec4988e9d93f9a054e384990cb07f7c8 83 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 9 59 1.1E-6 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SCD_RS07065 ec4988e9d93f9a054e384990cb07f7c8 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 9 77 4.1E-12 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SCD_RS07065 ec4988e9d93f9a054e384990cb07f7c8 83 PANTHER PTHR33713 1 83 2.7E-16 T 22-04-2016 SCD_RS07355 d8a91e2c6f478197e206c11d4fc099f2 298 PANTHER PTHR18895 1 297 2.2E-121 T 22-04-2016 SCD_RS07355 d8a91e2c6f478197e206c11d4fc099f2 298 Pfam PF05175 Methyltransferase small domain 134 212 6.9E-15 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SCD_RS07355 d8a91e2c6f478197e206c11d4fc099f2 298 PANTHER PTHR18895:SF66 1 297 2.2E-121 T 22-04-2016 SCD_RS07355 d8a91e2c6f478197e206c11d4fc099f2 298 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 203 209 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SCD_RS07355 d8a91e2c6f478197e206c11d4fc099f2 298 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 12 297 1.1E-67 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 SCD_RS07355 d8a91e2c6f478197e206c11d4fc099f2 298 Gene3D G3DSA:1.10.8.10 12 103 5.7E-6 T 22-04-2016 SCD_RS07355 d8a91e2c6f478197e206c11d4fc099f2 298 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 3 298 50.582 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 SCD_RS07355 d8a91e2c6f478197e206c11d4fc099f2 298 SUPERFAMILY SSF53335 13 290 8.51E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS07355 d8a91e2c6f478197e206c11d4fc099f2 298 Gene3D G3DSA:3.40.50.150 105 283 4.2E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS07355 d8a91e2c6f478197e206c11d4fc099f2 298 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 10 294 7.6E-129 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 SCD_RS07355 d8a91e2c6f478197e206c11d4fc099f2 298 PIRSF PIRSF037167 1 298 5.7E-131 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 SCD_RS03855 3a1ce33f6c6afb05f2945ed894e927c9 368 Pfam PF01627 Hpt domain 17 116 2.0E-7 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS03855 3a1ce33f6c6afb05f2945ed894e927c9 368 Gene3D G3DSA:1.10.3210.10 223 353 1.3E-10 T 22-04-2016 IPR006674 HD domain SCD_RS03855 3a1ce33f6c6afb05f2945ed894e927c9 368 SMART SM00073 14 111 5.5E-4 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS03855 3a1ce33f6c6afb05f2945ed894e927c9 368 SUPERFAMILY SSF109604 194 343 2.17E-16 T 22-04-2016 SCD_RS03855 3a1ce33f6c6afb05f2945ed894e927c9 368 Pfam PF13487 HD domain 252 314 1.8E-15 T 22-04-2016 SCD_RS03855 3a1ce33f6c6afb05f2945ed894e927c9 368 SUPERFAMILY SSF47226 13 137 1.24E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS03855 3a1ce33f6c6afb05f2945ed894e927c9 368 Gene3D G3DSA:1.20.120.160 14 141 2.4E-22 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SCD_RS08860 d807aa2dd107b1497b3136f9eb3d61c0 88 Gene3D G3DSA:4.10.640.10 22 88 1.2E-29 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS08860 d807aa2dd107b1497b3136f9eb3d61c0 88 PRINTS PR00974 Ribosomal protein S18 family signature 74 84 4.1E-16 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS08860 d807aa2dd107b1497b3136f9eb3d61c0 88 PRINTS PR00974 Ribosomal protein S18 family signature 52 59 4.1E-16 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS08860 d807aa2dd107b1497b3136f9eb3d61c0 88 PRINTS PR00974 Ribosomal protein S18 family signature 60 74 4.1E-16 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS08860 d807aa2dd107b1497b3136f9eb3d61c0 88 PRINTS PR00974 Ribosomal protein S18 family signature 42 52 4.1E-16 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS08860 d807aa2dd107b1497b3136f9eb3d61c0 88 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 35 87 1.0E-19 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS08860 d807aa2dd107b1497b3136f9eb3d61c0 88 SUPERFAMILY SSF46911 14 88 2.09E-27 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS08860 d807aa2dd107b1497b3136f9eb3d61c0 88 PANTHER PTHR13479 18 88 5.5E-25 T 22-04-2016 SCD_RS08860 d807aa2dd107b1497b3136f9eb3d61c0 88 Pfam PF01084 Ribosomal protein S18 32 82 8.6E-23 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS08860 d807aa2dd107b1497b3136f9eb3d61c0 88 TIGRFAM TIGR00165 S18: ribosomal protein bS18 19 86 4.1E-33 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS08860 d807aa2dd107b1497b3136f9eb3d61c0 88 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 3 87 20.408 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS11790 6079e49a391e7e9780486ba641665daa 264 PANTHER PTHR13832 4 246 2.4E-52 T 22-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 SCD_RS11790 6079e49a391e7e9780486ba641665daa 264 SMART SM00331 5 244 2.9E-36 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SCD_RS11790 6079e49a391e7e9780486ba641665daa 264 SMART SM00332 2 242 2.4E-20 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SCD_RS11790 6079e49a391e7e9780486ba641665daa 264 Pfam PF13672 Protein phosphatase 2C 11 205 4.6E-14 T 22-04-2016 SCD_RS11790 6079e49a391e7e9780486ba641665daa 264 PANTHER PTHR13832:SF278 4 246 2.4E-52 T 22-04-2016 SCD_RS11790 6079e49a391e7e9780486ba641665daa 264 SUPERFAMILY SSF81606 4 244 3.27E-61 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SCD_RS11790 6079e49a391e7e9780486ba641665daa 264 Gene3D G3DSA:3.60.40.10 4 244 6.2E-65 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SCD_RS11775 815da8fb47742bfb8076e216c6d73acc 207 PIRSF PIRSF009320 1 205 2.5E-32 T 22-04-2016 SCD_RS11775 815da8fb47742bfb8076e216c6d73acc 207 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 127 3.6E-22 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SCD_RS11775 815da8fb47742bfb8076e216c6d73acc 207 Gene3D G3DSA:3.40.50.300 2 198 6.9E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11775 815da8fb47742bfb8076e216c6d73acc 207 PANTHER PTHR13696 1 206 6.5E-30 T 22-04-2016 SCD_RS11775 815da8fb47742bfb8076e216c6d73acc 207 SUPERFAMILY SSF52540 1 194 2.28E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12500 8a4481f8ecbfaf8a4a5cee1f4b0b1e06 382 Gene3D G3DSA:2.40.160.10 25 382 3.5E-71 T 22-04-2016 IPR023614 Porin domain SCD_RS12500 8a4481f8ecbfaf8a4a5cee1f4b0b1e06 382 PRINTS PR00184 Neisseria sp. porin signature 318 342 1.2E-8 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 SCD_RS12500 8a4481f8ecbfaf8a4a5cee1f4b0b1e06 382 PRINTS PR00184 Neisseria sp. porin signature 58 83 1.2E-8 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 SCD_RS12500 8a4481f8ecbfaf8a4a5cee1f4b0b1e06 382 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 321 338 8.2E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 SCD_RS12500 8a4481f8ecbfaf8a4a5cee1f4b0b1e06 382 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 56 67 8.2E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 SCD_RS12500 8a4481f8ecbfaf8a4a5cee1f4b0b1e06 382 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 104 114 8.2E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 SCD_RS12500 8a4481f8ecbfaf8a4a5cee1f4b0b1e06 382 SUPERFAMILY SSF56935 25 382 3.97E-63 T 22-04-2016 SCD_RS12500 8a4481f8ecbfaf8a4a5cee1f4b0b1e06 382 Pfam PF13609 Gram-negative porin 7 346 3.2E-54 T 22-04-2016 SCD_RS06730 83c750df1a2f325fd1b72895c4efe0a7 280 Pfam PF16811 TRAP transporter T-component 36 280 1.3E-89 T 22-04-2016 IPR031823 TRAP transporter T-component SCD_RS03905 ca3f0bec99216506b999a20bc13ba3b4 203 Gene3D G3DSA:3.40.30.10 1 88 2.0E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS03905 ca3f0bec99216506b999a20bc13ba3b4 203 SUPERFAMILY SSF52833 1 99 5.82E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS03905 ca3f0bec99216506b999a20bc13ba3b4 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 73 5.0E-19 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SCD_RS03905 ca3f0bec99216506b999a20bc13ba3b4 203 Gene3D G3DSA:1.20.1050.10 89 200 1.1E-21 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SCD_RS03905 ca3f0bec99216506b999a20bc13ba3b4 203 Pfam PF13410 Glutathione S-transferase, C-terminal domain 120 184 1.2E-6 T 22-04-2016 SCD_RS03905 ca3f0bec99216506b999a20bc13ba3b4 203 PANTHER PTHR11260:SF256 1 201 1.7E-43 T 22-04-2016 SCD_RS03905 ca3f0bec99216506b999a20bc13ba3b4 203 PANTHER PTHR11260 1 201 1.7E-43 T 22-04-2016 SCD_RS03905 ca3f0bec99216506b999a20bc13ba3b4 203 SUPERFAMILY SSF47616 69 201 2.56E-26 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SCD_RS10475 be40dab06125490fade2a4a9e279072a 107 Pfam PF05957 Bacterial protein of unknown function (DUF883) 15 107 2.7E-29 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB SCD_RS10475 be40dab06125490fade2a4a9e279072a 107 PANTHER PTHR35893 4 107 8.0E-24 T 22-04-2016 SCD_RS05465 745e61106802afe216390b4604e92c5f 780 Pfam PF13567 Domain of unknown function (DUF4131) 10 185 1.3E-30 T 22-04-2016 IPR025405 Domain of unknown function DUF4131 SCD_RS05465 745e61106802afe216390b4604e92c5f 780 Pfam PF03772 Competence protein 228 491 6.1E-62 T 22-04-2016 IPR004477 ComEC/Rec2-related protein SCD_RS05465 745e61106802afe216390b4604e92c5f 780 PANTHER PTHR30619 1 780 8.2E-175 T 22-04-2016 SCD_RS05465 745e61106802afe216390b4604e92c5f 780 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 249 428 2.4E-26 T 22-04-2016 IPR004477 ComEC/Rec2-related protein SCD_RS05465 745e61106802afe216390b4604e92c5f 780 Pfam PF00753 Metallo-beta-lactamase superfamily 525 712 2.3E-10 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS05465 745e61106802afe216390b4604e92c5f 780 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 141 752 6.8E-112 T 22-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 SCD_RS05465 745e61106802afe216390b4604e92c5f 780 Gene3D G3DSA:3.60.15.10 517 744 2.3E-29 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS05465 745e61106802afe216390b4604e92c5f 780 SUPERFAMILY SSF56281 517 759 3.38E-42 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS05465 745e61106802afe216390b4604e92c5f 780 PANTHER PTHR30619:SF2 1 780 8.2E-175 T 22-04-2016 SCD_RS05465 745e61106802afe216390b4604e92c5f 780 SMART SM00849 528 723 0.0044 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS02550 fb5c7c563d318be654001b48a1e0f03d 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 3.5E-40 T 22-04-2016 IPR013527 YicC-like, N-terminal SCD_RS02550 fb5c7c563d318be654001b48a1e0f03d 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 6.9E-36 T 22-04-2016 IPR013551 Domain of unknown function DUF1732 SCD_RS02550 fb5c7c563d318be654001b48a1e0f03d 288 PANTHER PTHR30636 1 288 1.1E-99 T 22-04-2016 SCD_RS02550 fb5c7c563d318be654001b48a1e0f03d 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 7.5E-84 T 22-04-2016 IPR005229 Conserved hypothetical protein CHP00255 SCD_RS09585 e8b04e67b6748fd1a727186a158c0a26 415 Pfam PF01435 Peptidase family M48 207 410 9.7E-42 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SCD_RS09585 e8b04e67b6748fd1a727186a158c0a26 415 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 26 203 2.6E-53 T 22-04-2016 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 SCD_RS09585 e8b04e67b6748fd1a727186a158c0a26 415 Gene3D G3DSA:3.30.2010.10 200 292 6.4E-20 T 22-04-2016 SCD_RS09585 e8b04e67b6748fd1a727186a158c0a26 415 PANTHER PTHR10120 1 410 3.5E-114 T 22-04-2016 SCD_RS09585 e8b04e67b6748fd1a727186a158c0a26 415 PANTHER PTHR10120:SF24 1 410 3.5E-114 T 22-04-2016 IPR027057 CAAX prenyl protease 1 GO:0008233|GO:0071586 KEGG: 00900+3.4.24.84 SCD_RS05315 c2cbbe6946cea73d3c477d65603f0623 448 Gene3D G3DSA:1.10.443.10 227 418 4.5E-26 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SCD_RS05315 c2cbbe6946cea73d3c477d65603f0623 448 PANTHER PTHR30629 121 347 1.6E-60 T 22-04-2016 SCD_RS05315 c2cbbe6946cea73d3c477d65603f0623 448 PANTHER PTHR30629 1 101 1.6E-60 T 22-04-2016 SCD_RS05315 c2cbbe6946cea73d3c477d65603f0623 448 PANTHER PTHR30629 363 439 1.6E-60 T 22-04-2016 SCD_RS05315 c2cbbe6946cea73d3c477d65603f0623 448 Gene3D G3DSA:1.10.150.130 125 215 5.0E-12 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SCD_RS05315 c2cbbe6946cea73d3c477d65603f0623 448 Pfam PF13356 Domain of unknown function (DUF4102) 4 90 5.5E-9 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 SCD_RS05315 c2cbbe6946cea73d3c477d65603f0623 448 SUPERFAMILY SSF56349 364 416 9.12E-47 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SCD_RS05315 c2cbbe6946cea73d3c477d65603f0623 448 SUPERFAMILY SSF56349 122 322 9.12E-47 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SCD_RS05315 c2cbbe6946cea73d3c477d65603f0623 448 Pfam PF00589 Phage integrase family 232 413 3.4E-17 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SCD_RS11830 03d4db0c01a6d900d82f2007f3e518b4 300 PANTHER PTHR22916 42 295 2.0E-21 T 22-04-2016 SCD_RS11830 03d4db0c01a6d900d82f2007f3e518b4 300 SUPERFAMILY SSF53448 15 214 2.21E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS11830 03d4db0c01a6d900d82f2007f3e518b4 300 SUPERFAMILY SSF53448 245 255 2.21E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS11830 03d4db0c01a6d900d82f2007f3e518b4 300 Pfam PF00535 Glycosyl transferase family 2 17 137 4.1E-15 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SCD_RS11830 03d4db0c01a6d900d82f2007f3e518b4 300 Gene3D G3DSA:3.90.550.10 42 211 6.1E-25 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS04850 c1f78240110dd790a6cd476e378d0545 131 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 86 120 7.1E-14 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 SCD_RS04850 c1f78240110dd790a6cd476e378d0545 131 PANTHER PTHR33823 8 120 5.2E-22 T 22-04-2016 SCD_RS04850 c1f78240110dd790a6cd476e378d0545 131 SUPERFAMILY SSF109635 7 87 1.57E-11 T 22-04-2016 SCD_RS04850 c1f78240110dd790a6cd476e378d0545 131 SUPERFAMILY SSF57716 88 123 2.28E-10 T 22-04-2016 SCD_RS04850 c1f78240110dd790a6cd476e378d0545 131 PANTHER PTHR33823:SF2 8 120 5.2E-22 T 22-04-2016 SCD_RS04670 5923808db731b7b9d6d0676e0cab9858 118 PANTHER PTHR11058 1 118 8.4E-69 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 SCD_RS04670 5923808db731b7b9d6d0676e0cab9858 118 PANTHER PTHR11058:SF10 1 118 8.4E-69 T 22-04-2016 SCD_RS04670 5923808db731b7b9d6d0676e0cab9858 118 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 23 117 6.5E-41 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 SCD_RS04670 5923808db731b7b9d6d0676e0cab9858 118 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 118 20.498 T 22-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 SCD_RS07580 e73bf2a7f76f23e8f6f9fd2b69174225 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site SCD_RS07580 e73bf2a7f76f23e8f6f9fd2b69174225 412 Gene3D G3DSA:3.40.47.10 263 411 2.5E-61 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SCD_RS07580 e73bf2a7f76f23e8f6f9fd2b69174225 412 PANTHER PTHR11712 3 411 6.4E-217 T 22-04-2016 SCD_RS07580 e73bf2a7f76f23e8f6f9fd2b69174225 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 2.4E-35 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SCD_RS07580 e73bf2a7f76f23e8f6f9fd2b69174225 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 3.6E-62 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SCD_RS07580 e73bf2a7f76f23e8f6f9fd2b69174225 412 SUPERFAMILY SSF53901 214 411 1.57E-70 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SCD_RS07580 e73bf2a7f76f23e8f6f9fd2b69174225 412 SUPERFAMILY SSF53901 3 252 1.7E-80 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SCD_RS07580 e73bf2a7f76f23e8f6f9fd2b69174225 412 PIRSF PIRSF000447 1 412 2.1E-190 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 SCD_RS07580 e73bf2a7f76f23e8f6f9fd2b69174225 412 SMART SM00825 Beta-ketoacyl synthase 6 412 2.4E-16 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SCD_RS07580 e73bf2a7f76f23e8f6f9fd2b69174225 412 Gene3D G3DSA:3.40.47.10 3 258 1.1E-80 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SCD_RS07580 e73bf2a7f76f23e8f6f9fd2b69174225 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 410 3.1E-201 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 SCD_RS01925 9353af3e6fbf76812c5fec0b4b26acfe 281 SMART SM00090 5 231 9.3E-16 T 22-04-2016 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 SCD_RS01925 9353af3e6fbf76812c5fec0b4b26acfe 281 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 22-04-2016 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 SCD_RS01925 9353af3e6fbf76812c5fec0b4b26acfe 281 PANTHER PTHR10593:SF19 6 281 1.1E-117 T 22-04-2016 SCD_RS01925 9353af3e6fbf76812c5fec0b4b26acfe 281 Gene3D G3DSA:3.30.200.20 17 125 1.5E-12 T 22-04-2016 SCD_RS01925 9353af3e6fbf76812c5fec0b4b26acfe 281 Gene3D G3DSA:1.10.510.10 139 219 5.5E-21 T 22-04-2016 SCD_RS01925 9353af3e6fbf76812c5fec0b4b26acfe 281 SUPERFAMILY SSF56112 18 213 9.29E-22 T 22-04-2016 IPR011009 Protein kinase-like domain SCD_RS01925 9353af3e6fbf76812c5fec0b4b26acfe 281 Pfam PF01163 RIO1 family 31 219 1.9E-45 T 22-04-2016 SCD_RS01925 9353af3e6fbf76812c5fec0b4b26acfe 281 PANTHER PTHR10593 6 281 1.1E-117 T 22-04-2016 SCD_RS04260 751635f73d9c803897a016bcf2c7d701 425 SUPERFAMILY SSF52540 19 289 5.57E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS04260 751635f73d9c803897a016bcf2c7d701 425 Gene3D G3DSA:3.40.50.300 22 195 5.2E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12475 2e4aedf422e9051c15d251d65cb2aa1e 138 SUPERFAMILY SSF82784 1 136 1.44E-40 T 22-04-2016 IPR003718 OsmC/Ohr family SCD_RS12475 2e4aedf422e9051c15d251d65cb2aa1e 138 Pfam PF02566 OsmC-like protein 34 129 8.6E-18 T 22-04-2016 IPR003718 OsmC/Ohr family SCD_RS12475 2e4aedf422e9051c15d251d65cb2aa1e 138 Gene3D G3DSA:2.20.25.10 1 34 7.5E-17 T 22-04-2016 SCD_RS12475 2e4aedf422e9051c15d251d65cb2aa1e 138 PANTHER PTHR34352 1 138 7.5E-51 T 22-04-2016 SCD_RS12475 2e4aedf422e9051c15d251d65cb2aa1e 138 Gene3D G3DSA:3.30.300.20 39 136 5.2E-43 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SCD_RS13370 e5295d6106049375c743580a4cd9b491 192 PANTHER PTHR30055:SF58 7 180 9.4E-56 T 22-04-2016 SCD_RS13370 e5295d6106049375c743580a4cd9b491 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 56 1.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SCD_RS13370 e5295d6106049375c743580a4cd9b491 192 PANTHER PTHR30055 7 180 9.4E-56 T 22-04-2016 SCD_RS13370 e5295d6106049375c743580a4cd9b491 192 SUPERFAMILY SSF46689 4 75 2.13E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS13370 e5295d6106049375c743580a4cd9b491 192 SUPERFAMILY SSF48498 79 181 4.45E-11 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SCD_RS13370 e5295d6106049375c743580a4cd9b491 192 Gene3D G3DSA:1.10.357.10 3 187 6.1E-40 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SCD_RS05080 19337aed735860923f48c37a7ddd0853 853 Gene3D G3DSA:3.30.1360.40 236 334 1.9E-37 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain SCD_RS05080 19337aed735860923f48c37a7ddd0853 853 SMART SM00434 11 500 1.0E-290 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS05080 19337aed735860923f48c37a7ddd0853 853 Gene3D G3DSA:2.120.10.90 531 841 9.1E-136 T 22-04-2016 SCD_RS05080 19337aed735860923f48c37a7ddd0853 853 Gene3D G3DSA:1.10.268.10 364 497 1.2E-49 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS05080 19337aed735860923f48c37a7ddd0853 853 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 845 29.549 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SCD_RS05080 19337aed735860923f48c37a7ddd0853 853 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 504 6.8E-152 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SCD_RS05080 19337aed735860923f48c37a7ddd0853 853 Gene3D G3DSA:3.90.199.10 34 216 2.5E-84 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SCD_RS05080 19337aed735860923f48c37a7ddd0853 853 PANTHER PTHR10169:SF48 2 418 0.0 T 22-04-2016 SCD_RS05080 19337aed735860923f48c37a7ddd0853 853 PANTHER PTHR10169:SF48 451 811 0.0 T 22-04-2016 SCD_RS05080 19337aed735860923f48c37a7ddd0853 853 SUPERFAMILY SSF101904 534 850 2.09E-109 T 22-04-2016 SCD_RS05080 19337aed735860923f48c37a7ddd0853 853 PANTHER PTHR10169 2 418 0.0 T 22-04-2016 SCD_RS05080 19337aed735860923f48c37a7ddd0853 853 PANTHER PTHR10169 451 811 0.0 T 22-04-2016 SCD_RS05080 19337aed735860923f48c37a7ddd0853 853 SUPERFAMILY SSF56719 30 523 9.55E-178 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SCD_RS05080 19337aed735860923f48c37a7ddd0853 853 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 10 842 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SCD_RS05080 19337aed735860923f48c37a7ddd0853 853 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 745 792 5.2E-13 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SCD_RS05080 19337aed735860923f48c37a7ddd0853 853 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 694 739 7.4E-10 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SCD_RS05080 19337aed735860923f48c37a7ddd0853 853 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 795 841 8.3E-15 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SCD_RS05080 19337aed735860923f48c37a7ddd0853 853 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 539 585 2.2E-9 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SCD_RS05080 19337aed735860923f48c37a7ddd0853 853 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 589 639 9.8E-12 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SCD_RS05080 19337aed735860923f48c37a7ddd0853 853 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 689 2.0E-9 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SCD_RS02595 ffc05c8225deed536493f7b0030afaee 172 PANTHER PTHR41535 44 172 8.9E-16 T 22-04-2016 SCD_RS02595 ffc05c8225deed536493f7b0030afaee 172 SUPERFAMILY SSF50630 50 155 1.3E-17 T 22-04-2016 IPR021109 Aspartic peptidase domain SCD_RS02595 ffc05c8225deed536493f7b0030afaee 172 PANTHER PTHR41535:SF1 44 172 8.9E-16 T 22-04-2016 SCD_RS02595 ffc05c8225deed536493f7b0030afaee 172 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 72 83 - T 22-04-2016 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 SCD_RS02595 ffc05c8225deed536493f7b0030afaee 172 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 48 164 2.5E-22 T 22-04-2016 IPR011969 Clan AA aspartic peptidase, C-terminal SCD_RS02595 ffc05c8225deed536493f7b0030afaee 172 Pfam PF13975 gag-polyprotein putative aspartyl protease 63 150 1.6E-18 T 22-04-2016 SCD_RS08850 342ca740546cb1b860041608e7079586 457 PANTHER PTHR30153 1 457 6.3E-206 T 22-04-2016 SCD_RS08850 342ca740546cb1b860041608e7079586 457 SMART SM00382 209 410 7.0E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS08850 342ca740546cb1b860041608e7079586 457 SUPERFAMILY SSF52540 190 444 1.95E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08850 342ca740546cb1b860041608e7079586 457 Gene3D G3DSA:1.10.860.10 12 114 5.6E-38 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal SCD_RS08850 342ca740546cb1b860041608e7079586 457 Gene3D G3DSA:3.40.50.300 186 452 4.2E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08850 342ca740546cb1b860041608e7079586 457 SUPERFAMILY SSF48024 10 121 2.22E-37 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SCD_RS08850 342ca740546cb1b860041608e7079586 457 Pfam PF03796 DnaB-like helicase C terminal domain 192 450 4.7E-117 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 SCD_RS08850 342ca740546cb1b860041608e7079586 457 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 11 452 1.2E-176 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 SCD_RS08850 342ca740546cb1b860041608e7079586 457 Pfam PF00772 DnaB-like helicase N terminal domain 12 113 7.5E-35 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SCD_RS12835 8caeda5ef050b60c0d41bd258ed6dec0 125 PIRSF PIRSF028141 5 125 2.0E-39 T 22-04-2016 IPR027021 Cyclic di-GMP binding protein, PA4608 type SCD_RS12835 8caeda5ef050b60c0d41bd258ed6dec0 125 Pfam PF07238 PilZ domain 9 105 8.9E-11 T 22-04-2016 IPR009875 PilZ domain GO:0035438 SCD_RS12835 8caeda5ef050b60c0d41bd258ed6dec0 125 Gene3D G3DSA:2.40.10.220 6 123 2.3E-39 T 22-04-2016 SCD_RS12835 8caeda5ef050b60c0d41bd258ed6dec0 125 SUPERFAMILY SSF141371 7 123 5.49E-30 T 22-04-2016 SCD_RS10785 f6cbdd592b4514bf6201d9b4554dbc7f 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 9.3E-31 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SCD_RS10785 f6cbdd592b4514bf6201d9b4554dbc7f 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site SCD_RS10785 f6cbdd592b4514bf6201d9b4554dbc7f 67 SMART SM00357 3 67 5.6E-31 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 SCD_RS10785 f6cbdd592b4514bf6201d9b4554dbc7f 67 Gene3D G3DSA:2.40.50.140 1 65 1.0E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS10785 f6cbdd592b4514bf6201d9b4554dbc7f 67 PRINTS PR00050 Cold shock protein signature 25 34 1.8E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SCD_RS10785 f6cbdd592b4514bf6201d9b4554dbc7f 67 PRINTS PR00050 Cold shock protein signature 40 58 1.8E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SCD_RS10785 f6cbdd592b4514bf6201d9b4554dbc7f 67 PRINTS PR00050 Cold shock protein signature 4 19 1.8E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SCD_RS10785 f6cbdd592b4514bf6201d9b4554dbc7f 67 PANTHER PTHR11544 1 67 2.4E-37 T 22-04-2016 SCD_RS10785 f6cbdd592b4514bf6201d9b4554dbc7f 67 SUPERFAMILY SSF50249 1 65 1.71E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS10785 f6cbdd592b4514bf6201d9b4554dbc7f 67 PIRSF PIRSF002599 1 67 7.6E-24 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 SCD_RS14220 f2cf1b4bd056f31700383f0bbee7412d 319 PANTHER PTHR10366:SF329 1 318 4.2E-107 T 22-04-2016 SCD_RS14220 f2cf1b4bd056f31700383f0bbee7412d 319 Gene3D G3DSA:3.40.50.720 1 311 5.6E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS14220 f2cf1b4bd056f31700383f0bbee7412d 319 PANTHER PTHR10366 1 318 4.2E-107 T 22-04-2016 SCD_RS14220 f2cf1b4bd056f31700383f0bbee7412d 319 SUPERFAMILY SSF51735 2 316 1.69E-71 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS14220 f2cf1b4bd056f31700383f0bbee7412d 319 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 225 2.3E-33 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SCD_RS09130 26a09c101832929117c7cf79fdd93df5 275 Gene3D G3DSA:1.25.40.10 31 118 3.0E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS09130 26a09c101832929117c7cf79fdd93df5 275 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 256 44.848 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD SCD_RS09130 26a09c101832929117c7cf79fdd93df5 275 PANTHER PTHR37423 2 261 4.4E-80 T 22-04-2016 SCD_RS09130 26a09c101832929117c7cf79fdd93df5 275 Pfam PF13525 Outer membrane lipoprotein 31 247 8.2E-68 T 22-04-2016 SCD_RS09130 26a09c101832929117c7cf79fdd93df5 275 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 3 260 1.7E-91 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD SCD_RS09130 26a09c101832929117c7cf79fdd93df5 275 SUPERFAMILY SSF48452 30 104 9.25E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS10615 525bb248acd1b70e59f3987bb620d6f4 273 Gene3D G3DSA:3.40.50.150 39 189 5.0E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS10615 525bb248acd1b70e59f3987bb620d6f4 273 SUPERFAMILY SSF53335 42 177 4.63E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS10615 525bb248acd1b70e59f3987bb620d6f4 273 PANTHER PTHR13369 1 249 8.3E-21 T 22-04-2016 SCD_RS10615 525bb248acd1b70e59f3987bb620d6f4 273 Pfam PF13679 Methyltransferase domain 34 174 9.1E-45 T 22-04-2016 IPR025714 Methyltransferase domain SCD_RS08800 6c0228c739514547c60d8e0324f2d507 277 Gene3D G3DSA:1.10.600.10 5 276 1.0E-96 T 22-04-2016 IPR008949 Isoprenoid synthase domain SCD_RS08800 6c0228c739514547c60d8e0324f2d507 277 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 122 137 - T 22-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 SCD_RS08800 6c0228c739514547c60d8e0324f2d507 277 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 152 177 - T 22-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 SCD_RS08800 6c0228c739514547c60d8e0324f2d507 277 SUPERFAMILY SSF48576 4 276 9.46E-95 T 22-04-2016 IPR008949 Isoprenoid synthase domain SCD_RS08800 6c0228c739514547c60d8e0324f2d507 277 Pfam PF00494 Squalene/phytoene synthase 13 264 4.2E-84 T 22-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 SCD_RS08800 6c0228c739514547c60d8e0324f2d507 277 TIGRFAM TIGR03465 HpnD: squalene synthase HpnD 11 275 3.5E-119 T 22-04-2016 IPR017828 Squalene/phytoene synthase HpnD GO:0016117|GO:0016767 SCD_RS08800 6c0228c739514547c60d8e0324f2d507 277 PANTHER PTHR31480 5 276 2.4E-85 T 22-04-2016 SCD_RS09260 73549b662fca69c4964e5158dcbadccf 141 SUPERFAMILY SSF75169 29 134 6.28E-21 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS09260 73549b662fca69c4964e5158dcbadccf 141 PANTHER PTHR37691:SF1 21 141 2.0E-16 T 22-04-2016 SCD_RS09260 73549b662fca69c4964e5158dcbadccf 141 PANTHER PTHR37691 21 141 2.0E-16 T 22-04-2016 SCD_RS09260 73549b662fca69c4964e5158dcbadccf 141 Gene3D G3DSA:3.40.1260.10 28 141 9.5E-33 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS09260 73549b662fca69c4964e5158dcbadccf 141 Pfam PF02635 DsrE/DsrF-like family 40 140 3.3E-14 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein SCD_RS00695 3e09e56dbbf6fd20596d2edcd5cbbb95 245 SMART SM00849 11 183 4.6E-29 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS00695 3e09e56dbbf6fd20596d2edcd5cbbb95 245 PANTHER PTHR11935:SF9 1 241 5.8E-73 T 22-04-2016 SCD_RS00695 3e09e56dbbf6fd20596d2edcd5cbbb95 245 Gene3D G3DSA:3.60.15.10 9 239 9.2E-57 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS00695 3e09e56dbbf6fd20596d2edcd5cbbb95 245 Pfam PF00753 Metallo-beta-lactamase superfamily 42 183 2.3E-10 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS00695 3e09e56dbbf6fd20596d2edcd5cbbb95 245 PANTHER PTHR11935 1 241 5.8E-73 T 22-04-2016 SCD_RS00695 3e09e56dbbf6fd20596d2edcd5cbbb95 245 SUPERFAMILY SSF56281 10 222 1.21E-51 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS08400 d4ad9feb575047116512566a16c37b18 318 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 173 308 2.2E-20 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SCD_RS08400 d4ad9feb575047116512566a16c37b18 318 Pfam PF10135 Rod binding protein 50 97 1.4E-15 T 22-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal SCD_RS08400 d4ad9feb575047116512566a16c37b18 318 PANTHER PTHR33308:SF3 14 308 1.4E-30 T 22-04-2016 SCD_RS08400 d4ad9feb575047116512566a16c37b18 318 SMART SM00047 152 318 1.5E-34 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SCD_RS08400 d4ad9feb575047116512566a16c37b18 318 SUPERFAMILY SSF53955 156 206 6.56E-5 T 22-04-2016 IPR023346 Lysozyme-like domain SCD_RS08400 d4ad9feb575047116512566a16c37b18 318 PANTHER PTHR33308 14 308 1.4E-30 T 22-04-2016 SCD_RS08400 d4ad9feb575047116512566a16c37b18 318 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 12 308 1.6E-105 T 22-04-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- SCD_RS08400 d4ad9feb575047116512566a16c37b18 318 PRINTS PR01002 Flagellar protein FlgJ signature 228 249 3.6E-37 T 22-04-2016 SCD_RS08400 d4ad9feb575047116512566a16c37b18 318 PRINTS PR01002 Flagellar protein FlgJ signature 6 26 3.6E-37 T 22-04-2016 SCD_RS08400 d4ad9feb575047116512566a16c37b18 318 PRINTS PR01002 Flagellar protein FlgJ signature 206 227 3.6E-37 T 22-04-2016 SCD_RS08400 d4ad9feb575047116512566a16c37b18 318 PRINTS PR01002 Flagellar protein FlgJ signature 28 51 3.6E-37 T 22-04-2016 SCD_RS08400 d4ad9feb575047116512566a16c37b18 318 PRINTS PR01002 Flagellar protein FlgJ signature 250 271 3.6E-37 T 22-04-2016 SCD_RS08400 d4ad9feb575047116512566a16c37b18 318 PRINTS PR01002 Flagellar protein FlgJ signature 293 311 3.6E-37 T 22-04-2016 SCD_RS08400 d4ad9feb575047116512566a16c37b18 318 PRINTS PR01002 Flagellar protein FlgJ signature 186 204 3.6E-37 T 22-04-2016 SCD_RS05010 ae761e2cd7cdf3a45f5d05c49c82485a 90 Pfam PF14333 Domain of unknown function (DUF4389) 12 85 3.6E-29 T 22-04-2016 IPR025498 Protein of unknown function DUF4389 SCD_RS08585 1ae85a3fb2c2a92b95c175641779e949 182 Gene3D G3DSA:3.30.160.100 5 100 2.4E-18 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SCD_RS08585 1ae85a3fb2c2a92b95c175641779e949 182 SUPERFAMILY SSF50249 113 174 1.1E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS08585 1ae85a3fb2c2a92b95c175641779e949 182 Gene3D G3DSA:2.40.50.140 113 176 2.6E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS08585 1ae85a3fb2c2a92b95c175641779e949 182 SUPERFAMILY SSF69754 5 106 5.62E-19 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SCD_RS08585 1ae85a3fb2c2a92b95c175641779e949 182 Pfam PF00313 'Cold-shock' DNA-binding domain 115 174 7.0E-7 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SCD_RS08585 1ae85a3fb2c2a92b95c175641779e949 182 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 5 100 3.8E-14 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SCD_RS14620 e205a5bc63e3234c3928536f35e94dcd 386 SUPERFAMILY SSF53756 14 380 2.59E-110 T 22-04-2016 SCD_RS14620 e205a5bc63e3234c3928536f35e94dcd 386 PANTHER PTHR18964:SF70 14 381 6.1E-107 T 22-04-2016 SCD_RS14620 e205a5bc63e3234c3928536f35e94dcd 386 Gene3D G3DSA:3.40.50.2000 13 221 5.8E-74 T 22-04-2016 SCD_RS14620 e205a5bc63e3234c3928536f35e94dcd 386 Gene3D G3DSA:3.40.50.2000 222 378 1.5E-49 T 22-04-2016 SCD_RS14620 e205a5bc63e3234c3928536f35e94dcd 386 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 39 376 6.6E-108 T 22-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain SCD_RS14620 e205a5bc63e3234c3928536f35e94dcd 386 PANTHER PTHR18964 14 381 6.1E-107 T 22-04-2016 SCD_RS14620 e205a5bc63e3234c3928536f35e94dcd 386 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 14 376 9.2E-94 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 SCD_RS00150 262c9ed1d8caa3cdcd488529c7f8f4ee 617 PANTHER PTHR21000:SF11 1 371 0.0 T 22-04-2016 SCD_RS00150 262c9ed1d8caa3cdcd488529c7f8f4ee 617 PANTHER PTHR21000:SF11 406 615 0.0 T 22-04-2016 SCD_RS00150 262c9ed1d8caa3cdcd488529c7f8f4ee 617 PANTHER PTHR21000 1 371 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SCD_RS00150 262c9ed1d8caa3cdcd488529c7f8f4ee 617 PANTHER PTHR21000 406 615 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SCD_RS00150 262c9ed1d8caa3cdcd488529c7f8f4ee 617 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SCD_RS00150 262c9ed1d8caa3cdcd488529c7f8f4ee 617 Pfam PF00920 Dehydratase family 34 607 3.1E-215 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SCD_RS00150 262c9ed1d8caa3cdcd488529c7f8f4ee 617 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 7.8E-247 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SCD_RS00150 262c9ed1d8caa3cdcd488529c7f8f4ee 617 SUPERFAMILY SSF52016 421 613 2.98E-58 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SCD_RS00150 262c9ed1d8caa3cdcd488529c7f8f4ee 617 SUPERFAMILY SSF143975 4 420 1.31E-132 T 22-04-2016 SCD_RS00150 262c9ed1d8caa3cdcd488529c7f8f4ee 617 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 44.834 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SCD_RS00150 262c9ed1d8caa3cdcd488529c7f8f4ee 617 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SCD_RS07110 2a2410548feb733dcae77f4811290247 212 Pfam PF13202 EF hand 144 159 9.8E-5 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 SCD_RS07110 2a2410548feb733dcae77f4811290247 212 SMART SM00054 55 83 0.048 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 SCD_RS07110 2a2410548feb733dcae77f4811290247 212 SMART SM00054 16 44 14.0 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 SCD_RS07110 2a2410548feb733dcae77f4811290247 212 SMART SM00054 139 165 65.0 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 SCD_RS07110 2a2410548feb733dcae77f4811290247 212 Gene3D G3DSA:1.10.238.10 5 83 1.9E-11 T 22-04-2016 IPR011992 EF-hand domain pair SCD_RS07110 2a2410548feb733dcae77f4811290247 212 SUPERFAMILY SSF47473 19 164 9.69E-14 T 22-04-2016 IPR011992 EF-hand domain pair SCD_RS07110 2a2410548feb733dcae77f4811290247 212 Pfam PF13499 EF-hand domain pair 16 77 6.9E-10 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 SCD_RS07110 2a2410548feb733dcae77f4811290247 212 Gene3D G3DSA:1.10.238.10 131 146 3.6E-8 T 22-04-2016 IPR011992 EF-hand domain pair SCD_RS07110 2a2410548feb733dcae77f4811290247 212 Gene3D G3DSA:1.10.238.10 147 186 6.0E-4 T 22-04-2016 IPR011992 EF-hand domain pair SCD_RS07110 2a2410548feb733dcae77f4811290247 212 ProSitePatterns PS00018 EF-hand calcium-binding domain. 64 76 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site SCD_RS00700 3b6fcda5175885a87a5a772a8c0725d9 439 SUPERFAMILY SSF103473 28 431 3.14E-55 T 22-04-2016 IPR020846 Major facilitator superfamily domain SCD_RS00700 3b6fcda5175885a87a5a772a8c0725d9 439 PANTHER PTHR23517 1 438 1.2E-79 T 22-04-2016 SCD_RS00700 3b6fcda5175885a87a5a772a8c0725d9 439 Pfam PF07690 Major Facilitator Superfamily 264 431 4.5E-19 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SCD_RS00700 3b6fcda5175885a87a5a772a8c0725d9 439 Pfam PF07690 Major Facilitator Superfamily 29 228 1.6E-20 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SCD_RS00700 3b6fcda5175885a87a5a772a8c0725d9 439 Gene3D G3DSA:1.20.1250.20 247 431 4.2E-28 T 22-04-2016 SCD_RS00700 3b6fcda5175885a87a5a772a8c0725d9 439 Gene3D G3DSA:1.20.1250.20 28 200 1.3E-21 T 22-04-2016 SCD_RS00700 3b6fcda5175885a87a5a772a8c0725d9 439 PANTHER PTHR23517:SF4 1 438 1.2E-79 T 22-04-2016 SCD_RS10645 520ab1bd2364a7e321468d4f13b92db9 102 SUPERFAMILY SSF46626 10 97 2.8E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS05110 ccf5f6cebfe9bca7b65c830980de3ada 433 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 430 4.4E-141 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SCD_RS05110 ccf5f6cebfe9bca7b65c830980de3ada 433 PIRSF PIRSF000505 5 433 5.9E-150 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SCD_RS05110 ccf5f6cebfe9bca7b65c830980de3ada 433 ProSitePatterns PS00104 EPSP synthase signature 1. 89 103 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SCD_RS05110 ccf5f6cebfe9bca7b65c830980de3ada 433 ProSitePatterns PS00885 EPSP synthase signature 2. 341 359 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SCD_RS05110 ccf5f6cebfe9bca7b65c830980de3ada 433 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 432 34.467 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SCD_RS05110 ccf5f6cebfe9bca7b65c830980de3ada 433 PANTHER PTHR21090:SF21 6 429 1.9E-203 T 22-04-2016 SCD_RS05110 ccf5f6cebfe9bca7b65c830980de3ada 433 SUPERFAMILY SSF55205 1 429 6.93E-133 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SCD_RS05110 ccf5f6cebfe9bca7b65c830980de3ada 433 Gene3D G3DSA:3.65.10.10 238 428 9.4E-72 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SCD_RS05110 ccf5f6cebfe9bca7b65c830980de3ada 433 PANTHER PTHR21090 6 429 1.9E-203 T 22-04-2016 SCD_RS05110 ccf5f6cebfe9bca7b65c830980de3ada 433 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 426 1.2E-136 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SCD_RS05110 ccf5f6cebfe9bca7b65c830980de3ada 433 Gene3D G3DSA:3.65.10.10 22 237 1.3E-71 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SCD_RS05755 a49eedc08d8c58002ae375485bd0351b 325 PANTHER PTHR30465 93 324 1.3E-91 T 22-04-2016 SCD_RS05755 a49eedc08d8c58002ae375485bd0351b 325 PANTHER PTHR30465 1 74 1.3E-91 T 22-04-2016 SCD_RS05755 a49eedc08d8c58002ae375485bd0351b 325 PANTHER PTHR30465:SF24 93 324 1.3E-91 T 22-04-2016 SCD_RS05755 a49eedc08d8c58002ae375485bd0351b 325 PANTHER PTHR30465:SF24 1 74 1.3E-91 T 22-04-2016 SCD_RS05755 a49eedc08d8c58002ae375485bd0351b 325 SUPERFAMILY SSF161098 108 306 8.5E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SCD_RS05755 a49eedc08d8c58002ae375485bd0351b 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 323 3.1E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SCD_RS05755 a49eedc08d8c58002ae375485bd0351b 325 Gene3D G3DSA:1.10.3720.10 107 311 5.1E-10 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SCD_RS01380 25c2527f72b2e75012a477225c58bbc8 1273 SUPERFAMILY SSF46548 784 896 1.5E-13 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SCD_RS01380 25c2527f72b2e75012a477225c58bbc8 1273 Pfam PF02913 FAD linked oxidases, C-terminal domain 664 764 2.6E-19 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 SCD_RS01380 25c2527f72b2e75012a477225c58bbc8 1273 Pfam PF02913 FAD linked oxidases, C-terminal domain 404 541 2.2E-6 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 SCD_RS01380 25c2527f72b2e75012a477225c58bbc8 1273 Pfam PF11880 Domain of unknown function (DUF3400) 1229 1273 1.6E-24 T 22-04-2016 IPR021817 Protein of unknown function DUF3400 SCD_RS01380 25c2527f72b2e75012a477225c58bbc8 1273 SUPERFAMILY SSF56176 127 394 7.01E-56 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SCD_RS01380 25c2527f72b2e75012a477225c58bbc8 1273 PANTHER PTHR11748 598 766 6.8E-37 T 22-04-2016 SCD_RS01380 25c2527f72b2e75012a477225c58bbc8 1273 PANTHER PTHR11748 377 449 6.8E-37 T 22-04-2016 SCD_RS01380 25c2527f72b2e75012a477225c58bbc8 1273 PANTHER PTHR11748 140 318 6.8E-37 T 22-04-2016 SCD_RS01380 25c2527f72b2e75012a477225c58bbc8 1273 Pfam PF13183 4Fe-4S dicluster domain 801 879 1.2E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS01380 25c2527f72b2e75012a477225c58bbc8 1273 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 865 876 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS01380 25c2527f72b2e75012a477225c58bbc8 1273 Pfam PF12447 Protein of unknown function (DUF3683) 5 116 1.2E-51 T 22-04-2016 IPR022153 Protein of unknown function DUF3683 SCD_RS01380 25c2527f72b2e75012a477225c58bbc8 1273 Pfam PF01565 FAD binding domain 166 311 6.8E-23 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SCD_RS01380 25c2527f72b2e75012a477225c58bbc8 1273 Gene3D G3DSA:1.10.1060.10 797 899 3.9E-13 T 22-04-2016 SCD_RS01380 25c2527f72b2e75012a477225c58bbc8 1273 Gene3D G3DSA:3.30.43.10 122 282 4.9E-33 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SCD_RS01380 25c2527f72b2e75012a477225c58bbc8 1273 Pfam PF02754 Cysteine-rich domain 1012 1100 7.1E-7 T 22-04-2016 IPR004017 Cysteine-rich domain SCD_RS01380 25c2527f72b2e75012a477225c58bbc8 1273 Pfam PF02754 Cysteine-rich domain 1137 1225 0.071 T 22-04-2016 IPR004017 Cysteine-rich domain SCD_RS01380 25c2527f72b2e75012a477225c58bbc8 1273 SUPERFAMILY SSF55103 684 766 1.03E-38 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 SCD_RS01380 25c2527f72b2e75012a477225c58bbc8 1273 SUPERFAMILY SSF55103 404 555 1.03E-38 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 SCD_RS09120 96356e72fedaf217dff7d57c22229cf0 270 SUPERFAMILY SSF64438 6 178 3.11E-82 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic SCD_RS09120 96356e72fedaf217dff7d57c22229cf0 270 SUPERFAMILY SSF64438 206 269 3.11E-82 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic SCD_RS09120 96356e72fedaf217dff7d57c22229cf0 270 Gene3D G3DSA:3.60.140.10 5 269 3.6E-95 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SCD_RS09120 96356e72fedaf217dff7d57c22229cf0 270 PANTHER PTHR30616:SF3 6 177 9.3E-119 T 22-04-2016 SCD_RS09120 96356e72fedaf217dff7d57c22229cf0 270 PANTHER PTHR30616:SF3 209 270 9.3E-119 T 22-04-2016 SCD_RS09120 96356e72fedaf217dff7d57c22229cf0 270 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 27 269 2.3E-58 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SCD_RS09120 96356e72fedaf217dff7d57c22229cf0 270 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 21 268 5.9E-77 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SCD_RS09120 96356e72fedaf217dff7d57c22229cf0 270 PANTHER PTHR30616 6 177 9.3E-119 T 22-04-2016 SCD_RS09120 96356e72fedaf217dff7d57c22229cf0 270 PANTHER PTHR30616 209 270 9.3E-119 T 22-04-2016 SCD_RS06435 c8b544e46af2b8490225d9b860001ad7 704 SUPERFAMILY SSF55874 564 694 2.75E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS06435 c8b544e46af2b8490225d9b860001ad7 704 PANTHER PTHR24423 462 693 1.1E-29 T 22-04-2016 SCD_RS06435 c8b544e46af2b8490225d9b860001ad7 704 PANTHER PTHR24423 1 6 1.1E-29 T 22-04-2016 SCD_RS06435 c8b544e46af2b8490225d9b860001ad7 704 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 591 693 1.1E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS06435 c8b544e46af2b8490225d9b860001ad7 704 SMART SM00387 588 695 4.0E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS06435 c8b544e46af2b8490225d9b860001ad7 704 Gene3D G3DSA:3.30.565.10 520 696 1.5E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS06435 c8b544e46af2b8490225d9b860001ad7 704 TIGRFAM TIGR02916 PEP_his_kin: putative PEP-CTERM system histidine kinase 8 692 7.5E-251 T 22-04-2016 IPR014265 Signal transduction histidine kinase, PEP-CTERM system, putative SCD_RS06435 c8b544e46af2b8490225d9b860001ad7 704 SUPERFAMILY SSF55781 330 467 2.24E-8 T 22-04-2016 IPR029016 GAF domain-like SCD_RS06435 c8b544e46af2b8490225d9b860001ad7 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 654 3.5E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS06435 c8b544e46af2b8490225d9b860001ad7 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 679 692 3.5E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS06435 c8b544e46af2b8490225d9b860001ad7 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 639 3.5E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS06435 c8b544e46af2b8490225d9b860001ad7 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 673 3.5E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SCD_RS07670 a70e4ded28ee4b0e0687d9e08302ab6b 189 PRINTS PR01415 Ankyrin repeat signature 34 49 2.3E-5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS07670 a70e4ded28ee4b0e0687d9e08302ab6b 189 PRINTS PR01415 Ankyrin repeat signature 87 101 2.3E-5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS07670 a70e4ded28ee4b0e0687d9e08302ab6b 189 SUPERFAMILY SSF48403 5 159 1.7E-38 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SCD_RS07670 a70e4ded28ee4b0e0687d9e08302ab6b 189 Gene3D G3DSA:1.25.40.20 5 166 3.6E-41 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SCD_RS07670 a70e4ded28ee4b0e0687d9e08302ab6b 189 PANTHER PTHR24198 5 159 1.1E-39 T 22-04-2016 SCD_RS07670 a70e4ded28ee4b0e0687d9e08302ab6b 189 SMART SM00248 104 133 5.3 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS07670 a70e4ded28ee4b0e0687d9e08302ab6b 189 SMART SM00248 66 100 0.16 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS07670 a70e4ded28ee4b0e0687d9e08302ab6b 189 SMART SM00248 33 62 1.8E-4 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS07670 a70e4ded28ee4b0e0687d9e08302ab6b 189 SMART SM00248 137 166 190.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS07670 a70e4ded28ee4b0e0687d9e08302ab6b 189 Pfam PF12796 Ankyrin repeats (3 copies) 5 101 7.7E-15 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SCD_RS09995 363874c6c362449e3a69192b7608116b 690 PANTHER PTHR11814 1 230 3.3E-182 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 SCD_RS09995 363874c6c362449e3a69192b7608116b 690 PANTHER PTHR11814 366 690 3.3E-182 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 SCD_RS09995 363874c6c362449e3a69192b7608116b 690 Pfam PF00916 Sulfate permease family 22 248 1.3E-58 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 SCD_RS09995 363874c6c362449e3a69192b7608116b 690 Pfam PF00916 Sulfate permease family 359 520 1.2E-52 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 SCD_RS09995 363874c6c362449e3a69192b7608116b 690 Pfam PF01740 STAS domain 577 681 4.7E-15 T 22-04-2016 IPR002645 STAS domain SCD_RS09995 363874c6c362449e3a69192b7608116b 690 SUPERFAMILY SSF52091 577 685 3.34E-17 T 22-04-2016 IPR002645 STAS domain SCD_RS09995 363874c6c362449e3a69192b7608116b 690 Gene3D G3DSA:3.30.750.24 579 685 1.5E-16 T 22-04-2016 IPR002645 STAS domain SCD_RS08200 f2a10ae86661240ed9cef905b1cfb481 408 PANTHER PTHR10108:SF714 30 253 4.0E-49 T 22-04-2016 SCD_RS08200 f2a10ae86661240ed9cef905b1cfb481 408 Pfam PF13489 Methyltransferase domain 81 237 9.7E-13 T 22-04-2016 SCD_RS08200 f2a10ae86661240ed9cef905b1cfb481 408 PANTHER PTHR10108 30 253 4.0E-49 T 22-04-2016 SCD_RS08200 f2a10ae86661240ed9cef905b1cfb481 408 Pfam PF08421 Putative zinc binding domain 3 64 4.3E-22 T 22-04-2016 IPR013630 Methyltransferase putative zinc binding domain KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.-|UniPathway: UPA00853 SCD_RS08200 f2a10ae86661240ed9cef905b1cfb481 408 SUPERFAMILY SSF53335 60 253 1.57E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS08200 f2a10ae86661240ed9cef905b1cfb481 408 Gene3D G3DSA:3.40.50.150 376 399 1.1E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS08200 f2a10ae86661240ed9cef905b1cfb481 408 Gene3D G3DSA:3.40.50.150 86 255 1.1E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS08200 f2a10ae86661240ed9cef905b1cfb481 408 Pfam PF08484 C-methyltransferase C-terminal domain 244 403 1.2E-64 T 22-04-2016 IPR013691 C-methyltransferase KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.-|UniPathway: UPA00853 SCD_RS02380 d4dec27a17d355cc8a33401f7d86f01c 604 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 594 2.3E-258 T 22-04-2016 IPR019899 Sodium/solute symporter, VC2705 subfamily SCD_RS02380 d4dec27a17d355cc8a33401f7d86f01c 604 Pfam PF00474 Sodium:solute symporter family 407 522 1.0E-15 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SCD_RS02380 d4dec27a17d355cc8a33401f7d86f01c 604 Pfam PF00474 Sodium:solute symporter family 33 304 6.9E-34 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SCD_RS02380 d4dec27a17d355cc8a33401f7d86f01c 604 PANTHER PTHR11819:SF159 376 597 9.3E-208 T 22-04-2016 SCD_RS02380 d4dec27a17d355cc8a33401f7d86f01c 604 PANTHER PTHR11819:SF159 4 305 9.3E-208 T 22-04-2016 SCD_RS02380 d4dec27a17d355cc8a33401f7d86f01c 604 PANTHER PTHR11819 376 597 9.3E-208 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SCD_RS02380 d4dec27a17d355cc8a33401f7d86f01c 604 PANTHER PTHR11819 4 305 9.3E-208 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SCD_RS05785 851989e9b36c4d659851c2e918572265 156 Hamap MF_00042 Ribonuclease H [rnhA]. 12 154 32.486 T 22-04-2016 IPR022892 Ribonuclease H GO:0004523 SCD_RS05785 851989e9b36c4d659851c2e918572265 156 SUPERFAMILY SSF53098 13 152 1.11E-57 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS05785 851989e9b36c4d659851c2e918572265 156 PANTHER PTHR10642 1 155 3.6E-60 T 22-04-2016 SCD_RS05785 851989e9b36c4d659851c2e918572265 156 Pfam PF00075 RNase H 14 151 5.1E-48 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 SCD_RS05785 851989e9b36c4d659851c2e918572265 156 Gene3D G3DSA:3.30.420.10 13 153 1.3E-58 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS05390 76d14192bac55554d4aba7ee63b55842 181 PANTHER PTHR34875 6 178 3.1E-55 T 22-04-2016 SCD_RS05390 76d14192bac55554d4aba7ee63b55842 181 SUPERFAMILY SSF55021 6 88 4.07E-16 T 22-04-2016 SCD_RS05390 76d14192bac55554d4aba7ee63b55842 181 PIRSF PIRSF028103 6 181 1.6E-55 T 22-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 SCD_RS05390 76d14192bac55554d4aba7ee63b55842 181 Gene3D G3DSA:3.30.70.260 7 85 4.7E-24 T 22-04-2016 SCD_RS05390 76d14192bac55554d4aba7ee63b55842 181 Gene3D G3DSA:3.30.70.260 96 178 1.1E-21 T 22-04-2016 SCD_RS05390 76d14192bac55554d4aba7ee63b55842 181 SUPERFAMILY SSF55021 94 177 8.91E-18 T 22-04-2016 SCD_RS05390 76d14192bac55554d4aba7ee63b55842 181 PANTHER PTHR34875:SF3 6 178 3.1E-55 T 22-04-2016 SCD_RS05390 76d14192bac55554d4aba7ee63b55842 181 Pfam PF13740 ACT domain 9 80 8.7E-21 T 22-04-2016 SCD_RS12205 f662f128c7c2199a1fbdf4cb248da5c0 251 PANTHER PTHR39455 1 250 5.8E-57 T 22-04-2016 SCD_RS12205 f662f128c7c2199a1fbdf4cb248da5c0 251 Gene3D G3DSA:2.60.440.10 172 249 1.1E-21 T 22-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain SCD_RS12205 f662f128c7c2199a1fbdf4cb248da5c0 251 PANTHER PTHR39455:SF1 1 250 5.8E-57 T 22-04-2016 SCD_RS12205 f662f128c7c2199a1fbdf4cb248da5c0 251 Hamap MF_01092 Cell division protein ZapD [zapD]. 1 249 33.839 T 22-04-2016 IPR009777 Cell division protein ZapD SCD_RS12205 f662f128c7c2199a1fbdf4cb248da5c0 251 SUPERFAMILY SSF160950 2 249 3.14E-89 T 22-04-2016 SCD_RS12205 f662f128c7c2199a1fbdf4cb248da5c0 251 Gene3D G3DSA:1.10.3900.10 10 171 1.3E-64 T 22-04-2016 SCD_RS12205 f662f128c7c2199a1fbdf4cb248da5c0 251 Pfam PF07072 Protein of unknown function (DUF1342) 16 225 5.9E-84 T 22-04-2016 IPR009777 Cell division protein ZapD SCD_RS03530 ddecde6d1df69744483d5bb74764003e 206 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 21 160 7.9E-32 T 22-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 SCD_RS03530 ddecde6d1df69744483d5bb74764003e 206 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 63 85 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SCD_RS03530 ddecde6d1df69744483d5bb74764003e 206 PANTHER PTHR15362 1 149 7.7E-39 T 22-04-2016 SCD_RS03530 ddecde6d1df69744483d5bb74764003e 206 Pfam PF01066 CDP-alcohol phosphatidyltransferase 15 85 2.5E-13 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SCD_RS03530 ddecde6d1df69744483d5bb74764003e 206 PANTHER PTHR15362:SF2 1 149 7.7E-39 T 22-04-2016 SCD_RS05540 1254402c2200cf2d2399f1d9a37e7f47 218 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 18 213 1.0E-57 T 22-04-2016 SCD_RS05540 1254402c2200cf2d2399f1d9a37e7f47 218 Gene3D G3DSA:3.40.50.150 23 215 1.6E-56 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS05540 1254402c2200cf2d2399f1d9a37e7f47 218 SUPERFAMILY SSF53335 11 213 2.32E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS05540 1254402c2200cf2d2399f1d9a37e7f47 218 PANTHER PTHR11579 7 213 1.3E-66 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SCD_RS05540 1254402c2200cf2d2399f1d9a37e7f47 218 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 141 156 - T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SCD_RS05540 1254402c2200cf2d2399f1d9a37e7f47 218 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 11 217 33.149 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SCD_RS05540 1254402c2200cf2d2399f1d9a37e7f47 218 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 12 214 1.1E-64 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SCD_RS02600 9c670d0cbc1dbc02c995b9a9e2505ca9 113 Pfam PF07769 psiF repeat 26 59 4.3E-19 T 22-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat SCD_RS02600 9c670d0cbc1dbc02c995b9a9e2505ca9 113 Pfam PF07769 psiF repeat 79 105 7.0E-15 T 22-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat SCD_RS01710 b8044474a1e721cb092fdbaac9d899c0 302 PANTHER PTHR13929:SF0 2 302 2.2E-92 T 22-04-2016 SCD_RS01710 b8044474a1e721cb092fdbaac9d899c0 302 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 21 298 4.0E-60 T 22-04-2016 SCD_RS01710 b8044474a1e721cb092fdbaac9d899c0 302 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 12 300 21.953 T 22-04-2016 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SCD_RS01710 b8044474a1e721cb092fdbaac9d899c0 302 Pfam PF01040 UbiA prenyltransferase family 29 273 4.5E-43 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 SCD_RS01710 b8044474a1e721cb092fdbaac9d899c0 302 PANTHER PTHR13929 2 302 2.2E-92 T 22-04-2016 SCD_RS01710 b8044474a1e721cb092fdbaac9d899c0 302 PIRSF PIRSF005355 5 302 7.9E-93 T 22-04-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 SCD_RS01755 90fd71e164f6679687381ec76bede810 323 Pfam PF00037 4Fe-4S binding domain 296 313 1.6E-5 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS01755 90fd71e164f6679687381ec76bede810 323 Pfam PF12801 4Fe-4S binding domain 212 248 3.6E-4 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS01755 90fd71e164f6679687381ec76bede810 323 Pfam PF12801 4Fe-4S binding domain 117 159 5.7E-10 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS01755 90fd71e164f6679687381ec76bede810 323 Gene3D G3DSA:3.30.70.20 199 315 1.6E-9 T 22-04-2016 SCD_RS01755 90fd71e164f6679687381ec76bede810 323 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 60 315 4.2E-71 T 22-04-2016 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 SCD_RS01755 90fd71e164f6679687381ec76bede810 323 PANTHER PTHR30176:SF2 38 314 1.6E-24 T 22-04-2016 SCD_RS01755 90fd71e164f6679687381ec76bede810 323 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 297 308 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS01755 90fd71e164f6679687381ec76bede810 323 SUPERFAMILY SSF54862 225 314 4.19E-14 T 22-04-2016 SCD_RS01755 90fd71e164f6679687381ec76bede810 323 SUPERFAMILY SSF54862 129 177 4.19E-14 T 22-04-2016 SCD_RS01755 90fd71e164f6679687381ec76bede810 323 PANTHER PTHR30176 38 314 1.6E-24 T 22-04-2016 SCD_RS00740 3b029a28cfd71dee753b2cbc1690ac17 198 Gene3D G3DSA:3.40.50.150 9 197 8.6E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS00740 3b029a28cfd71dee753b2cbc1690ac17 198 PANTHER PTHR10108 40 140 1.1E-15 T 22-04-2016 SCD_RS00740 3b029a28cfd71dee753b2cbc1690ac17 198 Pfam PF03848 Tellurite resistance protein TehB 37 175 1.8E-17 T 22-04-2016 IPR015985 Tellurite resistance methyltransferase TehB-like domain SCD_RS00740 3b029a28cfd71dee753b2cbc1690ac17 198 PANTHER PTHR10108:SF358 40 140 1.1E-15 T 22-04-2016 SCD_RS00740 3b029a28cfd71dee753b2cbc1690ac17 198 SUPERFAMILY SSF53335 8 177 1.23E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS09450 48e4e9a24e6c30f413b86152677e233e 534 Pfam PF14574 Domain of unknown function (DUF4445) 131 526 4.9E-107 T 22-04-2016 IPR027980 Protein of unknown function DUF4445 SCD_RS09450 48e4e9a24e6c30f413b86152677e233e 534 Gene3D G3DSA:3.10.20.30 7 93 2.6E-16 T 22-04-2016 IPR012675 Beta-grasp domain SCD_RS09450 48e4e9a24e6c30f413b86152677e233e 534 SUPERFAMILY SSF53067 280 360 1.04E-5 T 22-04-2016 SCD_RS09450 48e4e9a24e6c30f413b86152677e233e 534 SUPERFAMILY SSF53067 189 234 1.04E-5 T 22-04-2016 SCD_RS09450 48e4e9a24e6c30f413b86152677e233e 534 SUPERFAMILY SSF53067 133 161 1.04E-5 T 22-04-2016 SCD_RS09450 48e4e9a24e6c30f413b86152677e233e 534 SUPERFAMILY SSF53067 398 454 1.04E-5 T 22-04-2016 SCD_RS09450 48e4e9a24e6c30f413b86152677e233e 534 SUPERFAMILY SSF54292 3 93 7.08E-18 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SCD_RS09450 48e4e9a24e6c30f413b86152677e233e 534 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 84 3.6E-8 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SCD_RS13925 c6394f1daf5875a10360d47b5c8fb70f 164 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 36 9.5E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS13925 c6394f1daf5875a10360d47b5c8fb70f 164 Pfam PF13633 Prokaryotic N-terminal methylation site 15 39 2.3E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS13925 c6394f1daf5875a10360d47b5c8fb70f 164 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS13925 c6394f1daf5875a10360d47b5c8fb70f 164 PRINTS PR00813 Bacterial general secretion pathway protein G signature 52 70 8.2E-7 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SCD_RS13925 c6394f1daf5875a10360d47b5c8fb70f 164 PRINTS PR00813 Bacterial general secretion pathway protein G signature 16 41 8.2E-7 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SCD_RS13925 c6394f1daf5875a10360d47b5c8fb70f 164 Gene3D G3DSA:3.30.700.10 17 68 6.1E-7 T 22-04-2016 SCD_RS13925 c6394f1daf5875a10360d47b5c8fb70f 164 SUPERFAMILY SSF54523 17 147 7.32E-14 T 22-04-2016 SCD_RS03915 c5cd865b228754462fdbc945f962f1c6 422 PANTHER PTHR10632 1 416 1.1E-166 T 22-04-2016 SCD_RS03915 c5cd865b228754462fdbc945f962f1c6 422 SUPERFAMILY SSF51905 149 306 3.63E-5 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS03915 c5cd865b228754462fdbc945f962f1c6 422 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 303 2.8E-15 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS03915 c5cd865b228754462fdbc945f962f1c6 422 PANTHER PTHR10632:SF7 1 416 1.1E-166 T 22-04-2016 SCD_RS03915 c5cd865b228754462fdbc945f962f1c6 422 SUPERFAMILY SSF51905 3 109 1.25E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS03915 c5cd865b228754462fdbc945f962f1c6 422 SUPERFAMILY SSF51905 256 338 1.25E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS03915 c5cd865b228754462fdbc945f962f1c6 422 Gene3D G3DSA:3.50.50.60 2 117 1.8E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS03915 c5cd865b228754462fdbc945f962f1c6 422 Gene3D G3DSA:3.50.50.60 263 340 1.8E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS10315 acf7daf34837c897ad408925dacb0820 126 SUPERFAMILY SSF52172 25 126 2.86E-5 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS10315 acf7daf34837c897ad408925dacb0820 126 Gene3D G3DSA:3.40.50.2300 22 126 3.4E-6 T 22-04-2016 SCD_RS13675 8a849e70298f8d5f076d02eaeed3d73e 312 PANTHER PTHR30606:SF6 4 309 1.1E-47 T 22-04-2016 SCD_RS13675 8a849e70298f8d5f076d02eaeed3d73e 312 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 29 301 7.3E-12 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SCD_RS13675 8a849e70298f8d5f076d02eaeed3d73e 312 PANTHER PTHR30606 4 309 1.1E-47 T 22-04-2016 SCD_RS13675 8a849e70298f8d5f076d02eaeed3d73e 312 PIRSF PIRSF028561 7 312 2.1E-120 T 22-04-2016 IPR014548 Predicted acyltransferase SCD_RS07045 17993cbfce55be43a4631eb2f5160604 398 Pfam PF02687 FtsX-like permease family 282 391 1.1E-10 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SCD_RS07045 17993cbfce55be43a4631eb2f5160604 398 PANTHER PTHR30489 217 398 1.4E-30 T 22-04-2016 SCD_RS07045 17993cbfce55be43a4631eb2f5160604 398 PANTHER PTHR30489 1 165 1.4E-30 T 22-04-2016 SCD_RS07045 17993cbfce55be43a4631eb2f5160604 398 PANTHER PTHR30489 184 199 1.4E-30 T 22-04-2016 SCD_RS07045 17993cbfce55be43a4631eb2f5160604 398 Pfam PF12704 MacB-like periplasmic core domain 17 249 1.9E-10 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SCD_RS10440 951d9a824003590578449846b4a83a53 166 Pfam PF08750 CNP1-like family 27 161 3.0E-48 T 22-04-2016 IPR014861 Uncharacterised domain CNP1 SCD_RS02860 5dd1f2bde277a3858a7567ece60d3185 265 PANTHER PTHR30188 10 265 9.0E-103 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 SCD_RS02860 5dd1f2bde277a3858a7567ece60d3185 265 Pfam PF02405 Permease MlaE 49 259 2.5E-77 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 SCD_RS02860 5dd1f2bde277a3858a7567ece60d3185 265 PANTHER PTHR30188:SF4 10 265 9.0E-103 T 22-04-2016 SCD_RS02860 5dd1f2bde277a3858a7567ece60d3185 265 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 29 264 9.9E-89 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria SCD_RS02145 312dea56c8dcec8a495753853364a596 337 PANTHER PTHR30217 1 224 9.2E-180 T 22-04-2016 SCD_RS02145 312dea56c8dcec8a495753853364a596 337 PANTHER PTHR30217 246 336 9.2E-180 T 22-04-2016 SCD_RS02145 312dea56c8dcec8a495753853364a596 337 Pfam PF01136 Peptidase family U32 81 336 1.9E-69 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SCD_RS02145 312dea56c8dcec8a495753853364a596 337 PANTHER PTHR30217:SF3 1 224 9.2E-180 T 22-04-2016 SCD_RS02145 312dea56c8dcec8a495753853364a596 337 PANTHER PTHR30217:SF3 246 336 9.2E-180 T 22-04-2016 SCD_RS05115 a1b67beeb91506501b99eb69336960b6 225 Gene3D G3DSA:3.40.50.300 9 220 4.8E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05115 a1b67beeb91506501b99eb69336960b6 225 SUPERFAMILY SSF52540 9 221 1.99E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05115 a1b67beeb91506501b99eb69336960b6 225 Pfam PF02224 Cytidylate kinase 11 220 8.3E-72 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SCD_RS05115 a1b67beeb91506501b99eb69336960b6 225 PANTHER PTHR21299 7 222 4.9E-70 T 22-04-2016 SCD_RS05115 a1b67beeb91506501b99eb69336960b6 225 Hamap MF_00238 Cytidylate kinase [cmk]. 9 223 33.003 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SCD_RS05115 a1b67beeb91506501b99eb69336960b6 225 TIGRFAM TIGR00017 cmk: cytidylate kinase 9 217 1.6E-72 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SCD_RS09875 b9e9736752dedd020767f13e7b9f7dea 46 Pfam PF00199 Catalase 7 41 1.9E-5 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SCD_RS09875 b9e9736752dedd020767f13e7b9f7dea 46 Gene3D G3DSA:2.40.180.10 2 41 1.5E-7 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SCD_RS09875 b9e9736752dedd020767f13e7b9f7dea 46 SUPERFAMILY SSF56634 3 41 1.31E-9 T 22-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SCD_RS06810 1a012e0f0bcaa06606576ad96c047d2a 150 SUPERFAMILY SSF143880 9 86 1.83E-17 T 22-04-2016 IPR018841 Protein of unknown function DUF2442 SCD_RS06810 1a012e0f0bcaa06606576ad96c047d2a 150 Gene3D G3DSA:1.10.260.40 90 148 1.0E-27 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SCD_RS06810 1a012e0f0bcaa06606576ad96c047d2a 150 Pfam PF10387 Protein of unknown function (DUF2442) 15 82 3.7E-7 T 22-04-2016 IPR018841 Protein of unknown function DUF2442 SCD_RS06810 1a012e0f0bcaa06606576ad96c047d2a 150 SUPERFAMILY SSF47413 91 149 7.24E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SCD_RS06810 1a012e0f0bcaa06606576ad96c047d2a 150 Gene3D G3DSA:3.30.2020.10 8 86 1.0E-20 T 22-04-2016 IPR018841 Protein of unknown function DUF2442 SCD_RS04040 7c9b5c91271a2e65476d89dd1ee6508b 357 PANTHER PTHR33529 1 351 1.4E-89 T 22-04-2016 SCD_RS04040 7c9b5c91271a2e65476d89dd1ee6508b 357 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 352 2.9E-74 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 SCD_RS04040 7c9b5c91271a2e65476d89dd1ee6508b 357 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 3 353 1.9E-123 T 22-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 SCD_RS04040 7c9b5c91271a2e65476d89dd1ee6508b 357 PANTHER PTHR33529:SF1 1 351 1.4E-89 T 22-04-2016 SCD_RS06145 0325bf03ea02ca870654c340e3ba048c 174 SUPERFAMILY SSF53335 12 157 3.92E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS06145 0325bf03ea02ca870654c340e3ba048c 174 Gene3D G3DSA:3.40.50.150 10 160 7.2E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS06145 0325bf03ea02ca870654c340e3ba048c 174 Pfam PF13489 Methyltransferase domain 12 134 2.5E-9 T 22-04-2016 SCD_RS15765 f8d0e8e392493122e286bfe9c53ba6b9 145 Gene3D G3DSA:1.20.120.20 55 138 1.3E-4 T 22-04-2016 SCD_RS15765 f8d0e8e392493122e286bfe9c53ba6b9 145 SUPERFAMILY SSF58113 30 140 1.83E-6 T 22-04-2016 SCD_RS03295 be6931304abb2ce2b7c972b520e0eefb 207 Pfam PF04367 Protein of unknown function (DUF502) 57 160 1.5E-32 T 22-04-2016 IPR007462 Protein of unknown function DUF502 SCD_RS03295 be6931304abb2ce2b7c972b520e0eefb 207 PANTHER PTHR31876:SF1 3 193 9.0E-47 T 22-04-2016 SCD_RS03295 be6931304abb2ce2b7c972b520e0eefb 207 PANTHER PTHR31876 3 193 9.0E-47 T 22-04-2016 SCD_RS13895 1855fa4960dedce1dfb24de259ea3540 565 Gene3D G3DSA:3.40.50.300 294 562 2.4E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13895 1855fa4960dedce1dfb24de259ea3540 565 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 382 396 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SCD_RS13895 1855fa4960dedce1dfb24de259ea3540 565 PANTHER PTHR30258:SF2 14 562 1.6E-163 T 22-04-2016 SCD_RS13895 1855fa4960dedce1dfb24de259ea3540 565 Gene3D G3DSA:3.30.450.90 155 282 7.8E-44 T 22-04-2016 SCD_RS13895 1855fa4960dedce1dfb24de259ea3540 565 Pfam PF00437 Type II/IV secretion system protein 186 454 7.3E-70 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SCD_RS13895 1855fa4960dedce1dfb24de259ea3540 565 SUPERFAMILY SSF160246 13 135 8.89E-16 T 22-04-2016 SCD_RS13895 1855fa4960dedce1dfb24de259ea3540 565 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 44 140 4.0E-9 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 SCD_RS13895 1855fa4960dedce1dfb24de259ea3540 565 SUPERFAMILY SSF52540 171 562 3.18E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13895 1855fa4960dedce1dfb24de259ea3540 565 PANTHER PTHR30258 14 562 1.6E-163 T 22-04-2016 SCD_RS02080 31eab974a39467dddfbee3b43efb72f4 685 SUPERFAMILY SSF109604 493 675 6.73E-25 T 22-04-2016 SCD_RS02080 31eab974a39467dddfbee3b43efb72f4 685 SUPERFAMILY SSF55785 362 483 3.24E-14 T 22-04-2016 IPR000014 PAS domain SCD_RS02080 31eab974a39467dddfbee3b43efb72f4 685 Pfam PF13487 HD domain 566 627 3.4E-15 T 22-04-2016 SCD_RS02080 31eab974a39467dddfbee3b43efb72f4 685 Gene3D G3DSA:1.10.3210.10 507 676 5.2E-10 T 22-04-2016 IPR006674 HD domain SCD_RS02080 31eab974a39467dddfbee3b43efb72f4 685 Gene3D G3DSA:3.30.450.20 365 484 6.2E-15 T 22-04-2016 SCD_RS02080 31eab974a39467dddfbee3b43efb72f4 685 SMART SM00091 373 439 0.0022 T 22-04-2016 IPR000014 PAS domain SCD_RS02080 31eab974a39467dddfbee3b43efb72f4 685 Pfam PF08448 PAS fold 380 485 2.7E-15 T 22-04-2016 IPR013656 PAS fold-4 SCD_RS02080 31eab974a39467dddfbee3b43efb72f4 685 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 372 491 7.9E-8 T 22-04-2016 IPR000014 PAS domain SCD_RS01625 96d772f58478f2612cab605251a37140 62 Gene3D G3DSA:2.60.40.790 15 62 5.8E-11 T 22-04-2016 IPR008978 HSP20-like chaperone SCD_RS01625 96d772f58478f2612cab605251a37140 62 SUPERFAMILY SSF49764 15 62 4.13E-12 T 22-04-2016 IPR008978 HSP20-like chaperone SCD_RS01625 96d772f58478f2612cab605251a37140 62 Pfam PF00011 Hsp20/alpha crystallin family 15 62 8.8E-6 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain SCD_RS01890 dabebfb8f8df51f5b61ffb5bf0cb0cab 191 Gene3D G3DSA:1.10.760.10 106 191 5.4E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01890 dabebfb8f8df51f5b61ffb5bf0cb0cab 191 SUPERFAMILY SSF46626 107 190 5.09E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01890 dabebfb8f8df51f5b61ffb5bf0cb0cab 191 Gene3D G3DSA:1.10.760.10 31 99 2.5E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01890 dabebfb8f8df51f5b61ffb5bf0cb0cab 191 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 113 186 2.7E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01890 dabebfb8f8df51f5b61ffb5bf0cb0cab 191 PIRSF PIRSF000005 4 191 4.3E-33 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 SCD_RS01890 dabebfb8f8df51f5b61ffb5bf0cb0cab 191 SUPERFAMILY SSF46626 32 99 4.98E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01890 dabebfb8f8df51f5b61ffb5bf0cb0cab 191 PANTHER PTHR33751:SF3 29 191 2.9E-27 T 22-04-2016 SCD_RS01890 dabebfb8f8df51f5b61ffb5bf0cb0cab 191 PANTHER PTHR33751 29 191 2.9E-27 T 22-04-2016 SCD_RS14670 dc2c95c86faf0b201b7aa8b895a18dda 412 Gene3D G3DSA:1.50.10.20 47 264 3.9E-14 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid SCD_RS14670 dc2c95c86faf0b201b7aa8b895a18dda 412 SUPERFAMILY SSF48208 73 371 1.87E-23 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SCD_RS14670 dc2c95c86faf0b201b7aa8b895a18dda 412 Pfam PF13243 Squalene-hopene cyclase C-terminal domain 96 256 1.8E-8 T 22-04-2016 IPR032696 Squalene cyclase, C-terminal SCD_RS04250 25c1ea836f8a751b5c2d1f19f630997e 483 SUPERFAMILY SSF53187 167 479 3.14E-95 T 22-04-2016 SCD_RS04250 25c1ea836f8a751b5c2d1f19f630997e 483 PANTHER PTHR11963:SF13 135 450 2.9E-100 T 22-04-2016 SCD_RS04250 25c1ea836f8a751b5c2d1f19f630997e 483 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 171 472 7.0E-97 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SCD_RS04250 25c1ea836f8a751b5c2d1f19f630997e 483 PANTHER PTHR11963 135 450 2.9E-100 T 22-04-2016 SCD_RS04250 25c1ea836f8a751b5c2d1f19f630997e 483 Gene3D G3DSA:3.40.630.10 166 478 2.8E-100 T 22-04-2016 SCD_RS04250 25c1ea836f8a751b5c2d1f19f630997e 483 PRINTS PR00481 Cytosol aminopeptidase signature 328 348 4.1E-39 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SCD_RS04250 25c1ea836f8a751b5c2d1f19f630997e 483 PRINTS PR00481 Cytosol aminopeptidase signature 247 264 4.1E-39 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SCD_RS04250 25c1ea836f8a751b5c2d1f19f630997e 483 PRINTS PR00481 Cytosol aminopeptidase signature 306 327 4.1E-39 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SCD_RS04250 25c1ea836f8a751b5c2d1f19f630997e 483 PRINTS PR00481 Cytosol aminopeptidase signature 269 290 4.1E-39 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SCD_RS04250 25c1ea836f8a751b5c2d1f19f630997e 483 PRINTS PR00481 Cytosol aminopeptidase signature 356 371 4.1E-39 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SCD_RS11230 980461dded99bf902d410ab6b7c1509f 579 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 391 403 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 SCD_RS11230 980461dded99bf902d410ab6b7c1509f 579 Gene3D G3DSA:3.30.200.20 262 337 3.8E-8 T 22-04-2016 SCD_RS11230 980461dded99bf902d410ab6b7c1509f 579 PANTHER PTHR24362:SF160 265 522 4.1E-62 T 22-04-2016 SCD_RS11230 980461dded99bf902d410ab6b7c1509f 579 SMART SM00331 19 236 3.1E-14 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SCD_RS11230 980461dded99bf902d410ab6b7c1509f 579 PANTHER PTHR24362 265 522 4.1E-62 T 22-04-2016 SCD_RS11230 980461dded99bf902d410ab6b7c1509f 579 SMART SM00332 1 234 7.5E-22 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SCD_RS11230 980461dded99bf902d410ab6b7c1509f 579 Pfam PF13672 Protein phosphatase 2C 21 205 5.7E-13 T 22-04-2016 SCD_RS11230 980461dded99bf902d410ab6b7c1509f 579 SUPERFAMILY SSF81606 6 237 1.57E-50 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SCD_RS11230 980461dded99bf902d410ab6b7c1509f 579 SMART SM00220 269 530 6.3E-25 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SCD_RS11230 980461dded99bf902d410ab6b7c1509f 579 Gene3D G3DSA:3.60.40.10 5 236 1.4E-47 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SCD_RS11230 980461dded99bf902d410ab6b7c1509f 579 Gene3D G3DSA:1.10.510.10 338 525 3.1E-43 T 22-04-2016 SCD_RS11230 980461dded99bf902d410ab6b7c1509f 579 SUPERFAMILY SSF56112 249 529 1.21E-58 T 22-04-2016 IPR011009 Protein kinase-like domain SCD_RS11230 980461dded99bf902d410ab6b7c1509f 579 Pfam PF00069 Protein kinase domain 279 486 3.2E-39 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SCD_RS00645 12252e608baef8d676b19755542a7557 232 SUPERFAMILY SSF53335 1 167 3.26E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS00645 12252e608baef8d676b19755542a7557 232 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 3 64 1.0E-5 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SCD_RS00645 12252e608baef8d676b19755542a7557 232 Gene3D G3DSA:3.40.50.150 1 167 3.9E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS11010 c37c0f5f87581184315f05de23cfc26a 221 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 206 2.3E-26 T 22-04-2016 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 UniPathway: UPA00148 SCD_RS12315 0f27072094db64dfeba439ca1cf75654 583 Pfam PF00905 Penicillin binding protein transpeptidase domain 256 552 2.1E-74 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SCD_RS12315 0f27072094db64dfeba439ca1cf75654 583 SUPERFAMILY SSF56519 64 230 1.44E-47 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SCD_RS12315 0f27072094db64dfeba439ca1cf75654 583 SUPERFAMILY SSF56601 183 568 1.78E-95 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS12315 0f27072094db64dfeba439ca1cf75654 583 PANTHER PTHR30627 9 583 2.4E-211 T 22-04-2016 SCD_RS12315 0f27072094db64dfeba439ca1cf75654 583 Pfam PF03717 Penicillin-binding Protein dimerisation domain 69 216 7.3E-22 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SCD_RS12315 0f27072094db64dfeba439ca1cf75654 583 Gene3D G3DSA:3.40.710.10 238 560 2.9E-88 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS12315 0f27072094db64dfeba439ca1cf75654 583 PANTHER PTHR30627:SF1 9 583 2.4E-211 T 22-04-2016 SCD_RS12315 0f27072094db64dfeba439ca1cf75654 583 Gene3D G3DSA:3.90.1310.10 137 237 3.5E-31 T 22-04-2016 SCD_RS10580 774030ed94ac521337a7e948c52709ab 617 SUPERFAMILY SSF48208 217 538 2.38E-40 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SCD_RS10580 774030ed94ac521337a7e948c52709ab 617 Pfam PF03190 Protein of unknown function, DUF255 46 195 8.3E-48 T 22-04-2016 IPR004879 Domain of unknown function DUF255 SCD_RS10580 774030ed94ac521337a7e948c52709ab 617 Gene3D G3DSA:3.40.30.10 63 183 1.6E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS10580 774030ed94ac521337a7e948c52709ab 617 SUPERFAMILY SSF52833 43 182 2.77E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS10580 774030ed94ac521337a7e948c52709ab 617 PANTHER PTHR12145 45 483 1.3E-117 T 22-04-2016 SCD_RS10580 774030ed94ac521337a7e948c52709ab 617 Gene3D G3DSA:1.50.10.10 260 355 4.0E-11 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 SCD_RS10580 774030ed94ac521337a7e948c52709ab 617 PANTHER PTHR12145:SF11 45 483 1.3E-117 T 22-04-2016 SCD_RS10580 774030ed94ac521337a7e948c52709ab 617 PIRSF PIRSF006402 38 616 1.6E-128 T 22-04-2016 IPR024705 Spermatogenesis-associated protein 20 SCD_RS14395 05e90f94b4e0f241a55e2040b1a98f7a 428 Pfam PF04932 O-Antigen ligase 209 353 2.3E-12 T 22-04-2016 IPR007016 O-antigen ligase-related SCD_RS11030 cd357a9c881bf790ece2f2145f2a1f82 665 Gene3D G3DSA:3.90.10.10 535 661 8.3E-7 T 22-04-2016 SCD_RS11030 cd357a9c881bf790ece2f2145f2a1f82 665 Gene3D G3DSA:3.90.10.10 353 378 9.5E-10 T 22-04-2016 SCD_RS11030 cd357a9c881bf790ece2f2145f2a1f82 665 Gene3D G3DSA:3.90.10.10 420 491 9.5E-10 T 22-04-2016 SCD_RS11030 cd357a9c881bf790ece2f2145f2a1f82 665 Gene3D G3DSA:3.90.10.10 293 301 9.5E-10 T 22-04-2016 SCD_RS11030 cd357a9c881bf790ece2f2145f2a1f82 665 SMART SM00635 30 105 3.4E-6 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 SCD_RS11030 cd357a9c881bf790ece2f2145f2a1f82 665 SUPERFAMILY SSF48695 427 662 2.02E-16 T 22-04-2016 IPR011031 Multihaem cytochrome SCD_RS11030 cd357a9c881bf790ece2f2145f2a1f82 665 SUPERFAMILY SSF48695 295 338 4.89E-14 T 22-04-2016 IPR011031 Multihaem cytochrome SCD_RS11030 cd357a9c881bf790ece2f2145f2a1f82 665 SUPERFAMILY SSF48695 374 491 4.89E-14 T 22-04-2016 IPR011031 Multihaem cytochrome SCD_RS11030 cd357a9c881bf790ece2f2145f2a1f82 665 Gene3D G3DSA:2.60.40.1080 32 106 4.0E-6 T 22-04-2016 SCD_RS14640 65567fa89457a9c0773a3b3aa53ccefb 522 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 33 282 2.0E-62 T 22-04-2016 IPR019127 Exosortase EpsH-related KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SCD_RS14640 65567fa89457a9c0773a3b3aa53ccefb 522 TIGRFAM TIGR03109 exosortase_1: exosortase A 20 285 4.1E-104 T 22-04-2016 IPR017540 Exosortase 1 SCD_RS14640 65567fa89457a9c0773a3b3aa53ccefb 522 Pfam PF11984 Protein of unknown function (DUF3485) 317 512 4.0E-41 T 22-04-2016 IPR014263 Methanolan biosynthesis EpsI SCD_RS14640 65567fa89457a9c0773a3b3aa53ccefb 522 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 190 281 1.4E-20 T 22-04-2016 IPR026392 Exosortase/Archaeosortase domain SCD_RS14640 65567fa89457a9c0773a3b3aa53ccefb 522 TIGRFAM TIGR02914 EpsI_fam: EpsI family protein 343 513 1.9E-40 T 22-04-2016 IPR014263 Methanolan biosynthesis EpsI SCD_RS14640 65567fa89457a9c0773a3b3aa53ccefb 522 TIGRFAM TIGR02602 8TM_EpsH: exosortase 47 284 1.9E-81 T 22-04-2016 IPR013426 Exosortase, EpsH SCD_RS06255 0646427f478ec2ed3560a35655071ef0 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 1.2E-33 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 SCD_RS06255 0646427f478ec2ed3560a35655071ef0 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 4.5E-33 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 SCD_RS06255 0646427f478ec2ed3560a35655071ef0 64 PANTHER PTHR37532 1 64 5.4E-31 T 22-04-2016 SCD_RS06255 0646427f478ec2ed3560a35655071ef0 64 Gene3D G3DSA:1.10.10.600 1 64 2.3E-33 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 SCD_RS06255 0646427f478ec2ed3560a35655071ef0 64 PIRSF PIRSF039003 1 64 3.4E-34 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 SCD_RS06255 0646427f478ec2ed3560a35655071ef0 64 SUPERFAMILY SSF140319 1 62 2.22E-27 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 SCD_RS06255 0646427f478ec2ed3560a35655071ef0 64 PANTHER PTHR37532:SF1 1 64 5.4E-31 T 22-04-2016 SCD_RS05240 20733b5a0a8600234642d4631dcb4759 251 PANTHER PTHR30632 9 248 5.2E-41 T 22-04-2016 SCD_RS05240 20733b5a0a8600234642d4631dcb4759 251 Pfam PF13531 Bacterial extracellular solute-binding protein 25 247 2.9E-48 T 22-04-2016 SCD_RS05240 20733b5a0a8600234642d4631dcb4759 251 PIRSF PIRSF004846 10 251 3.4E-51 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 SCD_RS05240 20733b5a0a8600234642d4631dcb4759 251 Gene3D G3DSA:3.40.190.10 111 208 2.1E-38 T 22-04-2016 SCD_RS05240 20733b5a0a8600234642d4631dcb4759 251 Gene3D G3DSA:3.40.190.10 209 250 5.2E-11 T 22-04-2016 SCD_RS05240 20733b5a0a8600234642d4631dcb4759 251 Gene3D G3DSA:3.40.190.10 22 110 5.2E-11 T 22-04-2016 SCD_RS05240 20733b5a0a8600234642d4631dcb4759 251 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 29 246 3.6E-70 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 SCD_RS05240 20733b5a0a8600234642d4631dcb4759 251 SUPERFAMILY SSF53850 22 250 1.51E-62 T 22-04-2016 SCD_RS11705 4597e9f6c997a5c9db666c964d580ac3 269 PANTHER PTHR21496:SF10 9 268 5.1E-74 T 22-04-2016 SCD_RS11705 4597e9f6c997a5c9db666c964d580ac3 269 Pfam PF04305 Protein of unknown function (DUF455) 20 265 4.9E-94 T 22-04-2016 IPR007402 Protein of unknown function DUF455 SCD_RS11705 4597e9f6c997a5c9db666c964d580ac3 269 SUPERFAMILY SSF47240 81 258 4.69E-17 T 22-04-2016 IPR009078 Ferritin-like superfamily SCD_RS11705 4597e9f6c997a5c9db666c964d580ac3 269 PIRSF PIRSF012318 4 269 3.5E-93 T 22-04-2016 IPR011197 Uncharacterised conserved protein UCP012318 SCD_RS11705 4597e9f6c997a5c9db666c964d580ac3 269 PANTHER PTHR21496 9 268 5.1E-74 T 22-04-2016 SCD_RS03675 0d88d43f611f1249ff383c65c7ab9aad 91 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 27 85 7.1E-21 T 22-04-2016 IPR025528 BrnA antitoxin of type II toxin-antitoxin system SCD_RS03795 15e210c616f7cab5c0b6b276dbeaddab 567 Pfam PF00374 Nickel-dependent hydrogenase 39 552 3.6E-212 T 22-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SCD_RS03795 15e210c616f7cab5c0b6b276dbeaddab 567 PANTHER PTHR11993:SF11 352 559 3.2E-171 T 22-04-2016 SCD_RS03795 15e210c616f7cab5c0b6b276dbeaddab 567 PANTHER PTHR11993:SF11 4 116 3.2E-171 T 22-04-2016 SCD_RS03795 15e210c616f7cab5c0b6b276dbeaddab 567 PANTHER PTHR11993:SF11 186 255 3.2E-171 T 22-04-2016 SCD_RS03795 15e210c616f7cab5c0b6b276dbeaddab 567 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 39 64 - T 22-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 SCD_RS03795 15e210c616f7cab5c0b6b276dbeaddab 567 Gene3D G3DSA:1.10.645.10 1 552 1.2E-207 T 22-04-2016 IPR029014 NiFe hydrogenase-like SCD_RS03795 15e210c616f7cab5c0b6b276dbeaddab 567 SUPERFAMILY SSF56762 1 552 1.31E-174 T 22-04-2016 IPR029014 NiFe hydrogenase-like SCD_RS03795 15e210c616f7cab5c0b6b276dbeaddab 567 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 543 552 - T 22-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 SCD_RS03795 15e210c616f7cab5c0b6b276dbeaddab 567 PANTHER PTHR11993 352 559 3.2E-171 T 22-04-2016 SCD_RS03795 15e210c616f7cab5c0b6b276dbeaddab 567 PANTHER PTHR11993 4 116 3.2E-171 T 22-04-2016 SCD_RS03795 15e210c616f7cab5c0b6b276dbeaddab 567 PANTHER PTHR11993 186 255 3.2E-171 T 22-04-2016 SCD_RS10970 c33c33c6e2b09ded83ab5b7ef4247794 263 SUPERFAMILY SSF51621 2 263 6.28E-108 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SCD_RS10970 c33c33c6e2b09ded83ab5b7ef4247794 263 PIRSF PIRSF000388 1 263 1.1E-107 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SCD_RS10970 c33c33c6e2b09ded83ab5b7ef4247794 263 PANTHER PTHR20881 2 263 5.3E-144 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SCD_RS10970 c33c33c6e2b09ded83ab5b7ef4247794 263 Pfam PF02548 Ketopantoate hydroxymethyltransferase 2 258 7.8E-116 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SCD_RS10970 c33c33c6e2b09ded83ab5b7ef4247794 263 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 3 263 44.479 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SCD_RS10970 c33c33c6e2b09ded83ab5b7ef4247794 263 Gene3D G3DSA:3.20.20.60 2 263 2.4E-117 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SCD_RS10970 c33c33c6e2b09ded83ab5b7ef4247794 263 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 3 263 3.9E-109 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SCD_RS14405 6ff356bd8482690df1c2ef2bd9b3473f 181 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 177 1.0E-83 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SCD_RS14405 6ff356bd8482690df1c2ef2bd9b3473f 181 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 180 3.0E-73 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SCD_RS14405 6ff356bd8482690df1c2ef2bd9b3473f 181 PANTHER PTHR21047 1 180 7.9E-77 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SCD_RS14405 6ff356bd8482690df1c2ef2bd9b3473f 181 SUPERFAMILY SSF51182 1 178 1.91E-76 T 22-04-2016 IPR011051 RmlC-like cupin domain SCD_RS14405 6ff356bd8482690df1c2ef2bd9b3473f 181 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 7 174 1.3E-71 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SCD_RS14405 6ff356bd8482690df1c2ef2bd9b3473f 181 Gene3D G3DSA:2.60.120.10 1 178 4.9E-80 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SCD_RS07150 3af50a53eff7e818f227e4c6d0f340c3 376 Pfam PF12698 ABC-2 family transporter protein 26 367 7.3E-52 T 22-04-2016 SCD_RS07150 3af50a53eff7e818f227e4c6d0f340c3 376 PANTHER PTHR30294 1 376 6.2E-113 T 22-04-2016 SCD_RS07150 3af50a53eff7e818f227e4c6d0f340c3 376 PANTHER PTHR30294:SF12 1 376 6.2E-113 T 22-04-2016 SCD_RS13670 4c62d8391bbd0d3cf73bc1ffa52c0944 209 SUPERFAMILY SSF89392 44 203 7.45E-13 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX SCD_RS13670 4c62d8391bbd0d3cf73bc1ffa52c0944 209 Gene3D G3DSA:2.50.20.10 44 205 7.1E-14 T 22-04-2016 SCD_RS07530 4a2c4b4bcf40de85db0ef382686f24ac 96 SMART SM00411 1 90 6.8E-35 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS07530 4a2c4b4bcf40de85db0ef382686f24ac 96 SUPERFAMILY SSF47729 1 91 1.16E-29 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SCD_RS07530 4a2c4b4bcf40de85db0ef382686f24ac 96 Pfam PF00216 Bacterial DNA-binding protein 1 89 8.0E-30 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS07530 4a2c4b4bcf40de85db0ef382686f24ac 96 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SCD_RS07530 4a2c4b4bcf40de85db0ef382686f24ac 96 Gene3D G3DSA:4.10.520.10 1 90 1.5E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SCD_RS07530 4a2c4b4bcf40de85db0ef382686f24ac 96 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.2E-15 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS07530 4a2c4b4bcf40de85db0ef382686f24ac 96 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.2E-15 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS07530 4a2c4b4bcf40de85db0ef382686f24ac 96 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.2E-15 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS07530 4a2c4b4bcf40de85db0ef382686f24ac 96 PANTHER PTHR33175 1 91 1.4E-31 T 22-04-2016 SCD_RS04905 577ca8247b4c21638418d6d17eca07f5 97 Pfam PF00216 Bacterial DNA-binding protein 1 89 3.6E-31 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS04905 577ca8247b4c21638418d6d17eca07f5 97 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.8E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS04905 577ca8247b4c21638418d6d17eca07f5 97 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.8E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS04905 577ca8247b4c21638418d6d17eca07f5 97 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.8E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS04905 577ca8247b4c21638418d6d17eca07f5 97 Gene3D G3DSA:4.10.520.10 1 94 1.8E-34 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SCD_RS04905 577ca8247b4c21638418d6d17eca07f5 97 SUPERFAMILY SSF47729 1 93 7.07E-31 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SCD_RS04905 577ca8247b4c21638418d6d17eca07f5 97 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SCD_RS04905 577ca8247b4c21638418d6d17eca07f5 97 PANTHER PTHR33175 1 91 5.1E-35 T 22-04-2016 SCD_RS04905 577ca8247b4c21638418d6d17eca07f5 97 SMART SM00411 1 90 5.8E-37 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SCD_RS09660 d144a770e4b513ede1fe2a3fcbb30d19 112 PANTHER PTHR37010 1 111 1.8E-40 T 22-04-2016 SCD_RS09660 d144a770e4b513ede1fe2a3fcbb30d19 112 Gene3D G3DSA:3.30.1420.10 4 40 8.9E-10 T 22-04-2016 SCD_RS09660 d144a770e4b513ede1fe2a3fcbb30d19 112 PIRSF PIRSF006223 4 111 1.8E-37 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE SCD_RS09660 d144a770e4b513ede1fe2a3fcbb30d19 112 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 5 111 5.1E-40 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE SCD_RS09660 d144a770e4b513ede1fe2a3fcbb30d19 112 Pfam PF04358 DsrC like protein 5 111 5.2E-39 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE SCD_RS09660 d144a770e4b513ede1fe2a3fcbb30d19 112 SUPERFAMILY SSF69721 4 111 1.57E-34 T 22-04-2016 IPR025526 DsrC-like domain SCD_RS09660 d144a770e4b513ede1fe2a3fcbb30d19 112 Gene3D G3DSA:1.10.10.370 41 111 2.1E-30 T 22-04-2016 SCD_RS09660 d144a770e4b513ede1fe2a3fcbb30d19 112 PANTHER PTHR37010:SF1 1 111 1.8E-40 T 22-04-2016 SCD_RS01705 e7d40dfd26dac13b8170ba7c2d847a88 271 PANTHER PTHR11941:SF20 1 264 1.5E-176 T 22-04-2016 SCD_RS01705 e7d40dfd26dac13b8170ba7c2d847a88 271 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 265 2.6E-77 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SCD_RS01705 e7d40dfd26dac13b8170ba7c2d847a88 271 TIGRFAM TIGR01929 menB: naphthoate synthase 9 267 5.2E-130 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SCD_RS01705 e7d40dfd26dac13b8170ba7c2d847a88 271 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 3 270 54.448 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SCD_RS01705 e7d40dfd26dac13b8170ba7c2d847a88 271 PANTHER PTHR11941 1 264 1.5E-176 T 22-04-2016 SCD_RS01705 e7d40dfd26dac13b8170ba7c2d847a88 271 Gene3D G3DSA:1.10.12.10 210 259 6.0E-28 T 22-04-2016 IPR014748 Crontonase, C-terminal SCD_RS01705 e7d40dfd26dac13b8170ba7c2d847a88 271 Gene3D G3DSA:3.90.226.10 9 208 1.9E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SCD_RS01705 e7d40dfd26dac13b8170ba7c2d847a88 271 SUPERFAMILY SSF52096 8 266 1.99E-77 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SCD_RS01705 e7d40dfd26dac13b8170ba7c2d847a88 271 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 109 129 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 SCD_RS04655 87661c788638509b778709b82992a6a3 251 Gene3D G3DSA:3.20.20.70 1 249 3.3E-102 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS04655 87661c788638509b778709b82992a6a3 251 SUPERFAMILY SSF51351 1 248 2.09E-93 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SCD_RS04655 87661c788638509b778709b82992a6a3 251 PANTHER PTHR21139 1 249 4.6E-118 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SCD_RS04655 87661c788638509b778709b82992a6a3 251 Pfam PF00121 Triosephosphate isomerase 4 246 5.8E-90 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SCD_RS04655 87661c788638509b778709b82992a6a3 251 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 39.902 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SCD_RS04655 87661c788638509b778709b82992a6a3 251 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 239 1.8E-68 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SCD_RS04655 87661c788638509b778709b82992a6a3 251 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SCD_RS02570 4e0d605658d58d7b32fce1b0e76aebd0 199 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 194 48.364 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SCD_RS02570 4e0d605658d58d7b32fce1b0e76aebd0 199 SUPERFAMILY SSF52972 1 194 2.38E-71 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SCD_RS02570 4e0d605658d58d7b32fce1b0e76aebd0 199 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 192 4.2E-52 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SCD_RS02570 4e0d605658d58d7b32fce1b0e76aebd0 199 Gene3D G3DSA:3.90.950.10 1 194 4.8E-75 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SCD_RS02570 4e0d605658d58d7b32fce1b0e76aebd0 199 Pfam PF01725 Ham1 family 4 190 8.1E-54 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SCD_RS02570 4e0d605658d58d7b32fce1b0e76aebd0 199 PANTHER PTHR11067:SF9 1 199 1.1E-76 T 22-04-2016 SCD_RS02570 4e0d605658d58d7b32fce1b0e76aebd0 199 PANTHER PTHR11067 1 199 1.1E-76 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SCD_RS15005 96a65c795ef525e20b1d314c8368ef5f 632 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 22-04-2016 IPR020595 MnmG-related, conserved site SCD_RS15005 96a65c795ef525e20b1d314c8368ef5f 632 Gene3D G3DSA:3.50.50.60 6 234 6.0E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS15005 96a65c795ef525e20b1d314c8368ef5f 632 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.567 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 SCD_RS15005 96a65c795ef525e20b1d314c8368ef5f 632 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 1.5E-275 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 SCD_RS15005 96a65c795ef525e20b1d314c8368ef5f 632 PANTHER PTHR11806:SF0 1 624 0.0 T 22-04-2016 SCD_RS15005 96a65c795ef525e20b1d314c8368ef5f 632 PANTHER PTHR11806 1 624 0.0 T 22-04-2016 SCD_RS15005 96a65c795ef525e20b1d314c8368ef5f 632 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 22-04-2016 IPR020595 MnmG-related, conserved site SCD_RS15005 96a65c795ef525e20b1d314c8368ef5f 632 Pfam PF01134 Glucose inhibited division protein A 8 399 3.3E-166 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 SCD_RS15005 96a65c795ef525e20b1d314c8368ef5f 632 SMART SM01228 546 617 1.3E-43 T 22-04-2016 SCD_RS15005 96a65c795ef525e20b1d314c8368ef5f 632 SUPERFAMILY SSF51905 97 261 9.89E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS15005 96a65c795ef525e20b1d314c8368ef5f 632 SUPERFAMILY SSF51905 6 66 9.89E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS15005 96a65c795ef525e20b1d314c8368ef5f 632 Pfam PF13932 GidA associated domain 403 616 1.2E-71 T 22-04-2016 IPR026904 GidA associated domain 3 SCD_RS09815 7297a9f31c8c17b1fd8d1744e6ec6d69 233 PANTHER PTHR30586:SF0 3 224 4.3E-115 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 SCD_RS09815 7297a9f31c8c17b1fd8d1744e6ec6d69 233 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 10 213 3.7E-79 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 SCD_RS09815 7297a9f31c8c17b1fd8d1744e6ec6d69 233 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 214 26.599 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 SCD_RS09815 7297a9f31c8c17b1fd8d1744e6ec6d69 233 PANTHER PTHR30586 3 224 4.3E-115 T 22-04-2016 SCD_RS09815 7297a9f31c8c17b1fd8d1744e6ec6d69 233 Pfam PF02508 Rnf-Nqr subunit, membrane protein 8 204 1.1E-60 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SCD_RS09815 7297a9f31c8c17b1fd8d1744e6ec6d69 233 PIRSF PIRSF006102 4 223 9.8E-74 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SCD_RS00795 7dd4c9070fd7bc821ce16232a1ede7a8 138 SUPERFAMILY SSF75169 77 121 7.74E-13 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS00795 7dd4c9070fd7bc821ce16232a1ede7a8 138 SUPERFAMILY SSF75169 1 48 7.74E-13 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS00795 7dd4c9070fd7bc821ce16232a1ede7a8 138 Gene3D G3DSA:3.40.1260.10 1 136 2.7E-27 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS00795 7dd4c9070fd7bc821ce16232a1ede7a8 138 Pfam PF02635 DsrE/DsrF-like family 4 121 6.5E-7 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein SCD_RS05200 780da56ce6e8369fcf9583bacc9bcab4 429 SUPERFAMILY SSF50249 3 56 9.14E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS05200 780da56ce6e8369fcf9583bacc9bcab4 429 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 412 422 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site SCD_RS05200 780da56ce6e8369fcf9583bacc9bcab4 429 SUPERFAMILY SSF53335 58 429 2.02E-84 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS05200 780da56ce6e8369fcf9583bacc9bcab4 429 Pfam PF01938 TRAM domain 4 34 7.6E-5 T 22-04-2016 IPR002792 TRAM domain SCD_RS05200 780da56ce6e8369fcf9583bacc9bcab4 429 Gene3D G3DSA:2.40.50.140 4 70 1.6E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS05200 780da56ce6e8369fcf9583bacc9bcab4 429 Gene3D G3DSA:3.40.50.150 250 428 3.6E-55 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS05200 780da56ce6e8369fcf9583bacc9bcab4 429 PANTHER PTHR11061:SF30 3 429 3.9E-116 T 22-04-2016 SCD_RS05200 780da56ce6e8369fcf9583bacc9bcab4 429 PANTHER PTHR11061 3 429 3.9E-116 T 22-04-2016 SCD_RS05200 780da56ce6e8369fcf9583bacc9bcab4 429 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 112 428 2.0E-19 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 SCD_RS05200 780da56ce6e8369fcf9583bacc9bcab4 429 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 1 429 68.805 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 SCD_RS05585 7817460dc19353201c2a93c7c277cd3b 408 PANTHER PTHR11751 9 405 4.7E-174 T 22-04-2016 SCD_RS05585 7817460dc19353201c2a93c7c277cd3b 408 PANTHER PTHR11751:SF303 9 405 4.7E-174 T 22-04-2016 SCD_RS05585 7817460dc19353201c2a93c7c277cd3b 408 Gene3D G3DSA:3.40.640.10 50 281 1.7E-63 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS05585 7817460dc19353201c2a93c7c277cd3b 408 Pfam PF00155 Aminotransferase class I and II 35 393 1.8E-49 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SCD_RS05585 7817460dc19353201c2a93c7c277cd3b 408 SUPERFAMILY SSF53383 5 402 1.75E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS05585 7817460dc19353201c2a93c7c277cd3b 408 Gene3D G3DSA:3.90.1150.10 282 404 2.1E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SCD_RS12280 a4c6d68184089f63d1b91b96b6e4ff5b 462 PANTHER PTHR23135 1 452 7.3E-202 T 22-04-2016 SCD_RS12280 a4c6d68184089f63d1b91b96b6e4ff5b 462 Pfam PF08245 Mur ligase middle domain 110 290 7.0E-29 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS12280 a4c6d68184089f63d1b91b96b6e4ff5b 462 SUPERFAMILY SSF53244 309 453 6.72E-47 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SCD_RS12280 a4c6d68184089f63d1b91b96b6e4ff5b 462 Pfam PF02875 Mur ligase family, glutamate ligase domain 310 401 3.0E-20 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SCD_RS12280 a4c6d68184089f63d1b91b96b6e4ff5b 462 Pfam PF01225 Mur ligase family, catalytic domain 8 105 3.6E-26 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS12280 a4c6d68184089f63d1b91b96b6e4ff5b 462 SUPERFAMILY SSF53623 91 308 4.45E-71 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS12280 a4c6d68184089f63d1b91b96b6e4ff5b 462 Gene3D G3DSA:3.90.190.20 312 458 2.7E-54 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SCD_RS12280 a4c6d68184089f63d1b91b96b6e4ff5b 462 Gene3D G3DSA:3.40.1190.10 94 311 5.4E-83 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SCD_RS12280 a4c6d68184089f63d1b91b96b6e4ff5b 462 SUPERFAMILY SSF51984 6 92 2.75E-29 T 22-04-2016 SCD_RS12280 a4c6d68184089f63d1b91b96b6e4ff5b 462 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 5 462 42.647 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS12280 a4c6d68184089f63d1b91b96b6e4ff5b 462 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 7 454 1.4E-169 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS12280 a4c6d68184089f63d1b91b96b6e4ff5b 462 PANTHER PTHR23135:SF5 1 452 7.3E-202 T 22-04-2016 SCD_RS12280 a4c6d68184089f63d1b91b96b6e4ff5b 462 Gene3D G3DSA:3.40.50.720 6 92 1.4E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS07080 8b42614167ce107503a3130d6dfa6df6 141 SUPERFAMILY SSF88723 6 123 3.92E-11 T 22-04-2016 IPR029060 PIN domain-like SCD_RS07080 8b42614167ce107503a3130d6dfa6df6 141 Pfam PF13470 PIN domain 6 118 7.9E-15 T 22-04-2016 IPR002716 PIN domain SCD_RS07080 8b42614167ce107503a3130d6dfa6df6 141 PANTHER PTHR34610:SF3 1 138 1.2E-18 T 22-04-2016 SCD_RS07080 8b42614167ce107503a3130d6dfa6df6 141 SMART SM00670 5 123 3.4E-5 T 22-04-2016 IPR002716 PIN domain SCD_RS07080 8b42614167ce107503a3130d6dfa6df6 141 PANTHER PTHR34610 1 138 1.2E-18 T 22-04-2016 SCD_RS07080 8b42614167ce107503a3130d6dfa6df6 141 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 6 124 5.6E-17 T 22-04-2016 IPR002850 PIN family, putative toxin-antitoxin system toxin component SCD_RS03110 4cb8a25675f3f355dc260233e7f28e79 206 SUPERFAMILY SSF52166 1 205 3.79E-69 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 SCD_RS03110 4cb8a25675f3f355dc260233e7f28e79 206 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 203 2.6E-69 T 22-04-2016 IPR013005 50S ribosomal protein uL4 SCD_RS03110 4cb8a25675f3f355dc260233e7f28e79 206 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 32.046 T 22-04-2016 IPR013005 50S ribosomal protein uL4 SCD_RS03110 4cb8a25675f3f355dc260233e7f28e79 206 Pfam PF00573 Ribosomal protein L4/L1 family 18 203 1.2E-60 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 SCD_RS03110 4cb8a25675f3f355dc260233e7f28e79 206 PANTHER PTHR10746 1 205 6.3E-74 T 22-04-2016 IPR013005 50S ribosomal protein uL4 SCD_RS03110 4cb8a25675f3f355dc260233e7f28e79 206 Gene3D G3DSA:3.40.1370.10 58 206 2.1E-53 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 SCD_RS00080 4851d3be3de96558ae23f7fdb8ebadf9 636 PANTHER PTHR30540:SF7 24 635 6.5E-244 T 22-04-2016 SCD_RS00080 4851d3be3de96558ae23f7fdb8ebadf9 636 PANTHER PTHR30540 24 635 6.5E-244 T 22-04-2016 SCD_RS00080 4851d3be3de96558ae23f7fdb8ebadf9 636 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 17 636 35.469 T 22-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup SCD_RS00080 4851d3be3de96558ae23f7fdb8ebadf9 636 Pfam PF02705 K+ potassium transporter 26 558 2.0E-217 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 SCD_RS02430 3668cb423f7206826d03ecd01e073d66 96 SMART SM00883 2 94 8.5E-59 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SCD_RS02430 3668cb423f7206826d03ecd01e073d66 96 Gene3D G3DSA:2.30.33.40 1 95 1.2E-38 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SCD_RS02430 3668cb423f7206826d03ecd01e073d66 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 1.9E-35 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SCD_RS02430 3668cb423f7206826d03ecd01e073d66 96 PANTHER PTHR10772 1 95 4.1E-44 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SCD_RS02430 3668cb423f7206826d03ecd01e073d66 96 SUPERFAMILY SSF50129 1 95 2.35E-35 T 22-04-2016 IPR011032 GroES-like SCD_RS02430 3668cb423f7206826d03ecd01e073d66 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 SCD_RS02430 3668cb423f7206826d03ecd01e073d66 96 PRINTS PR00297 10kDa chaperonin signature 3 18 6.8E-34 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SCD_RS02430 3668cb423f7206826d03ecd01e073d66 96 PRINTS PR00297 10kDa chaperonin signature 81 94 6.8E-34 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SCD_RS02430 3668cb423f7206826d03ecd01e073d66 96 PRINTS PR00297 10kDa chaperonin signature 25 46 6.8E-34 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SCD_RS02430 3668cb423f7206826d03ecd01e073d66 96 PRINTS PR00297 10kDa chaperonin signature 60 72 6.8E-34 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SCD_RS02430 3668cb423f7206826d03ecd01e073d66 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 27.481 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SCD_RS06405 c80b2cdb7b6303de558c103daf7f312d 216 PANTHER PTHR33693 12 206 1.4E-64 T 22-04-2016 SCD_RS06405 c80b2cdb7b6303de558c103daf7f312d 216 SMART SM00986 39 206 2.4E-26 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SCD_RS06405 c80b2cdb7b6303de558c103daf7f312d 216 SMART SM00987 39 206 2.4E-26 T 22-04-2016 SCD_RS06405 c80b2cdb7b6303de558c103daf7f312d 216 Pfam PF03167 Uracil DNA glycosylase superfamily 39 206 2.9E-25 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SCD_RS06405 c80b2cdb7b6303de558c103daf7f312d 216 Gene3D G3DSA:3.40.470.10 12 210 2.4E-50 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SCD_RS06405 c80b2cdb7b6303de558c103daf7f312d 216 SUPERFAMILY SSF52141 13 212 7.52E-44 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SCD_RS06405 c80b2cdb7b6303de558c103daf7f312d 216 PANTHER PTHR33693:SF2 12 206 1.4E-64 T 22-04-2016 SCD_RS07510 3e5c5d4f69d5944ad664e791e3f1bef0 215 PANTHER PTHR36698 11 206 1.9E-13 T 22-04-2016 SCD_RS07510 3e5c5d4f69d5944ad664e791e3f1bef0 215 Gene3D G3DSA:3.40.50.10610 25 205 1.1E-32 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component SCD_RS07510 3e5c5d4f69d5944ad664e791e3f1bef0 215 SUPERFAMILY SSF159594 36 204 6.02E-30 T 22-04-2016 SCD_RS07510 3e5c5d4f69d5944ad664e791e3f1bef0 215 PANTHER PTHR36698:SF1 11 206 1.9E-13 T 22-04-2016 SCD_RS07510 3e5c5d4f69d5944ad664e791e3f1bef0 215 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 70 199 1.4E-9 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component SCD_RS06165 d090940ca45ba1f1e1cf42973ee503a9 381 Pfam PF06804 NlpB/DapX lipoprotein 33 376 1.7E-53 T 22-04-2016 IPR010653 NlpB/DapX lipoprotein SCD_RS11425 1b717c7d631ee81040e4a4e3b043d1c9 130 Pfam PF07238 PilZ domain 38 128 5.4E-8 T 22-04-2016 IPR009875 PilZ domain GO:0035438 SCD_RS11425 1b717c7d631ee81040e4a4e3b043d1c9 130 SUPERFAMILY SSF141371 35 110 1.2E-5 T 22-04-2016 SCD_RS07175 8779c248e43e9465f47c82668eff1cd1 414 Gene3D G3DSA:2.40.128.140 76 106 4.7E-93 T 22-04-2016 SCD_RS07175 8779c248e43e9465f47c82668eff1cd1 414 Gene3D G3DSA:2.40.128.140 142 411 4.7E-93 T 22-04-2016 SCD_RS07175 8779c248e43e9465f47c82668eff1cd1 414 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 79 412 5.8E-87 T 22-04-2016 IPR018707 Protein of unknown function DUF2219 SCD_RS15925 9172bbd4636acfe80551aa5c140d89c2 253 Gene3D G3DSA:1.25.40.20 31 163 4.6E-35 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SCD_RS15925 9172bbd4636acfe80551aa5c140d89c2 253 Gene3D G3DSA:1.25.40.20 164 251 1.2E-16 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SCD_RS15925 9172bbd4636acfe80551aa5c140d89c2 253 Pfam PF12796 Ankyrin repeats (3 copies) 68 155 3.4E-11 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SCD_RS15925 9172bbd4636acfe80551aa5c140d89c2 253 Pfam PF12796 Ankyrin repeats (3 copies) 164 249 3.5E-6 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SCD_RS15925 9172bbd4636acfe80551aa5c140d89c2 253 SMART SM00248 27 56 440.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS15925 9172bbd4636acfe80551aa5c140d89c2 253 SMART SM00248 192 221 1.8 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS15925 9172bbd4636acfe80551aa5c140d89c2 253 SMART SM00248 93 125 0.037 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS15925 9172bbd4636acfe80551aa5c140d89c2 253 SMART SM00248 159 188 150.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS15925 9172bbd4636acfe80551aa5c140d89c2 253 SMART SM00248 60 89 1.9 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS15925 9172bbd4636acfe80551aa5c140d89c2 253 SMART SM00248 126 155 0.14 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS15925 9172bbd4636acfe80551aa5c140d89c2 253 SMART SM00248 224 253 4500.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SCD_RS15925 9172bbd4636acfe80551aa5c140d89c2 253 PANTHER PTHR24198 32 252 7.2E-47 T 22-04-2016 SCD_RS15925 9172bbd4636acfe80551aa5c140d89c2 253 SUPERFAMILY SSF48403 31 249 4.64E-46 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SCD_RS13420 70b38bc9074f7aaaecb3719be98d90ad 110 Gene3D G3DSA:3.30.1420.10 4 40 3.0E-14 T 22-04-2016 SCD_RS13420 70b38bc9074f7aaaecb3719be98d90ad 110 Gene3D G3DSA:1.10.10.370 41 110 3.1E-38 T 22-04-2016 SCD_RS13420 70b38bc9074f7aaaecb3719be98d90ad 110 SUPERFAMILY SSF69721 3 110 1.83E-43 T 22-04-2016 IPR025526 DsrC-like domain SCD_RS13420 70b38bc9074f7aaaecb3719be98d90ad 110 Pfam PF04358 DsrC like protein 4 110 2.7E-48 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE SCD_RS13420 70b38bc9074f7aaaecb3719be98d90ad 110 PIRSF PIRSF006223 3 110 1.3E-45 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE SCD_RS13420 70b38bc9074f7aaaecb3719be98d90ad 110 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 110 3.6E-51 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE SCD_RS13420 70b38bc9074f7aaaecb3719be98d90ad 110 PANTHER PTHR37010:SF1 3 110 2.4E-51 T 22-04-2016 SCD_RS13420 70b38bc9074f7aaaecb3719be98d90ad 110 PANTHER PTHR37010 3 110 2.4E-51 T 22-04-2016 SCD_RS04140 1ac4c87f345901e765580228b2075954 138 Gene3D G3DSA:1.20.120.50 6 132 3.3E-27 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SCD_RS04140 1ac4c87f345901e765580228b2075954 138 SUPERFAMILY SSF47188 6 132 2.49E-25 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SCD_RS04140 1ac4c87f345901e765580228b2075954 138 Pfam PF01814 Hemerythrin HHE cation binding domain 16 128 7.2E-14 T 22-04-2016 IPR012312 Haemerythrin-like SCD_RS04140 1ac4c87f345901e765580228b2075954 138 ProSitePatterns PS00550 Hemerythrin family signature. 61 84 - T 22-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 SCD_RS04140 1ac4c87f345901e765580228b2075954 138 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 8 132 6.0E-29 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SCD_RS04140 1ac4c87f345901e765580228b2075954 138 PANTHER PTHR37164 4 138 5.6E-27 T 22-04-2016 SCD_RS06885 2c1f320d72a2acdcf8fe46d08a6c2311 199 Gene3D G3DSA:1.10.10.10 124 189 3.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS06885 2c1f320d72a2acdcf8fe46d08a6c2311 199 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS06885 2c1f320d72a2acdcf8fe46d08a6c2311 199 Pfam PF08281 Sigma-70, region 4 134 182 3.6E-16 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS06885 2c1f320d72a2acdcf8fe46d08a6c2311 199 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 187 1.2E-32 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS06885 2c1f320d72a2acdcf8fe46d08a6c2311 199 SUPERFAMILY SSF88659 124 187 9.91E-18 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS06885 2c1f320d72a2acdcf8fe46d08a6c2311 199 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 191 1.8E-97 T 22-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS06885 2c1f320d72a2acdcf8fe46d08a6c2311 199 Gene3D G3DSA:1.10.1740.10 3 113 9.6E-36 T 22-04-2016 SCD_RS06885 2c1f320d72a2acdcf8fe46d08a6c2311 199 SUPERFAMILY SSF88946 3 109 2.04E-30 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS06885 2c1f320d72a2acdcf8fe46d08a6c2311 199 Pfam PF04542 Sigma-70 region 2 25 92 3.3E-18 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS06885 2c1f320d72a2acdcf8fe46d08a6c2311 199 PANTHER PTHR30173 1 198 1.0E-49 T 22-04-2016 SCD_RS12345 d55edda6b6b1dc611d12dc8a5ef8bc67 346 Gene3D G3DSA:1.10.760.10 13 98 9.1E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS12345 d55edda6b6b1dc611d12dc8a5ef8bc67 346 Gene3D G3DSA:1.10.760.10 109 210 1.4E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS12345 d55edda6b6b1dc611d12dc8a5ef8bc67 346 SUPERFAMILY SSF103247 223 344 1.06E-26 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SCD_RS12345 d55edda6b6b1dc611d12dc8a5ef8bc67 346 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 20 92 5.3E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS12345 d55edda6b6b1dc611d12dc8a5ef8bc67 346 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 111 201 2.1E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS12345 d55edda6b6b1dc611d12dc8a5ef8bc67 346 SUPERFAMILY SSF46626 103 206 2.62E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS12345 d55edda6b6b1dc611d12dc8a5ef8bc67 346 PANTHER PTHR33751 24 211 7.6E-15 T 22-04-2016 SCD_RS12345 d55edda6b6b1dc611d12dc8a5ef8bc67 346 PANTHER PTHR33751:SF1 24 211 7.6E-15 T 22-04-2016 SCD_RS12345 d55edda6b6b1dc611d12dc8a5ef8bc67 346 Gene3D G3DSA:3.30.310.70 220 344 7.1E-25 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SCD_RS12345 d55edda6b6b1dc611d12dc8a5ef8bc67 346 Pfam PF03625 Domain of unknown function DUF302 263 314 6.6E-13 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SCD_RS12345 d55edda6b6b1dc611d12dc8a5ef8bc67 346 SUPERFAMILY SSF46626 5 101 6.4E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS05635 390995fc373aa3446c8ca8c5eb8b140c 354 Gene3D G3DSA:1.10.45.10 324 350 5.9E-6 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 SCD_RS05635 390995fc373aa3446c8ca8c5eb8b140c 354 Gene3D G3DSA:3.30.465.10 52 173 1.4E-21 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SCD_RS05635 390995fc373aa3446c8ca8c5eb8b140c 354 SUPERFAMILY SSF56176 10 173 2.1E-30 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SCD_RS05635 390995fc373aa3446c8ca8c5eb8b140c 354 SUPERFAMILY SSF55103 185 352 1.96E-16 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 SCD_RS05635 390995fc373aa3446c8ca8c5eb8b140c 354 PANTHER PTHR11748 10 351 2.2E-79 T 22-04-2016 SCD_RS05635 390995fc373aa3446c8ca8c5eb8b140c 354 Pfam PF01565 FAD binding domain 10 135 2.3E-19 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SCD_RS05635 390995fc373aa3446c8ca8c5eb8b140c 354 PANTHER PTHR11748:SF1 10 351 2.2E-79 T 22-04-2016 SCD_RS06365 7922254569f2b2ef24afa7799889a0e4 160 Pfam PF14437 MafB19-like deaminase 9 152 2.1E-30 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 SCD_RS06365 7922254569f2b2ef24afa7799889a0e4 160 SUPERFAMILY SSF53927 6 152 2.68E-57 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SCD_RS06365 7922254569f2b2ef24afa7799889a0e4 160 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 11 152 47.947 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 SCD_RS06365 7922254569f2b2ef24afa7799889a0e4 160 PANTHER PTHR11079 2 152 8.9E-49 T 22-04-2016 SCD_RS06365 7922254569f2b2ef24afa7799889a0e4 160 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 93 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SCD_RS06365 7922254569f2b2ef24afa7799889a0e4 160 Gene3D G3DSA:3.40.140.10 3 151 1.0E-60 T 22-04-2016 SCD_RS12800 1f16c4a634a06cb5b8fac56bd626287c 281 SMART SM01091 195 273 3.3E-28 T 22-04-2016 IPR005170 Transporter-associated domain SCD_RS12800 1f16c4a634a06cb5b8fac56bd626287c 281 PANTHER PTHR22777:SF17 20 277 5.3E-103 T 22-04-2016 SCD_RS12800 1f16c4a634a06cb5b8fac56bd626287c 281 SUPERFAMILY SSF56176 193 276 2.21E-22 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SCD_RS12800 1f16c4a634a06cb5b8fac56bd626287c 281 Pfam PF00571 CBS domain 125 178 9.1E-8 T 22-04-2016 IPR000644 CBS domain SCD_RS12800 1f16c4a634a06cb5b8fac56bd626287c 281 Pfam PF00571 CBS domain 72 118 4.1E-5 T 22-04-2016 IPR000644 CBS domain SCD_RS12800 1f16c4a634a06cb5b8fac56bd626287c 281 PANTHER PTHR22777 20 277 5.3E-103 T 22-04-2016 SCD_RS12800 1f16c4a634a06cb5b8fac56bd626287c 281 SMART SM00116 130 178 0.025 T 22-04-2016 IPR000644 CBS domain SCD_RS12800 1f16c4a634a06cb5b8fac56bd626287c 281 SMART SM00116 69 118 14.0 T 22-04-2016 IPR000644 CBS domain SCD_RS12800 1f16c4a634a06cb5b8fac56bd626287c 281 Gene3D G3DSA:3.30.465.10 186 273 9.4E-28 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SCD_RS12800 1f16c4a634a06cb5b8fac56bd626287c 281 Gene3D G3DSA:3.10.580.10 48 185 1.6E-21 T 22-04-2016 SCD_RS12800 1f16c4a634a06cb5b8fac56bd626287c 281 SUPERFAMILY SSF54631 56 191 7.2E-33 T 22-04-2016 SCD_RS12800 1f16c4a634a06cb5b8fac56bd626287c 281 Pfam PF03471 Transporter associated domain 196 272 1.7E-21 T 22-04-2016 IPR005170 Transporter-associated domain SCD_RS03890 c6ed2ba22de2663dc6a1fab9edf47960 148 SUPERFAMILY SSF55811 3 141 4.2E-26 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SCD_RS03890 c6ed2ba22de2663dc6a1fab9edf47960 148 Gene3D G3DSA:3.90.79.10 1 144 8.8E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SCD_RS03890 c6ed2ba22de2663dc6a1fab9edf47960 148 Pfam PF00293 NUDIX domain 5 122 1.0E-12 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SCD_RS03890 c6ed2ba22de2663dc6a1fab9edf47960 148 PANTHER PTHR22769 1 136 1.8E-18 T 22-04-2016 SCD_RS03890 c6ed2ba22de2663dc6a1fab9edf47960 148 PANTHER PTHR22769:SF14 1 136 1.8E-18 T 22-04-2016 SCD_RS07495 c9fa50c2b1fe08db017761455b5aa605 378 SUPERFAMILY SSF52091 13 101 8.04E-10 T 22-04-2016 IPR002645 STAS domain SCD_RS07495 c9fa50c2b1fe08db017761455b5aa605 378 PANTHER PTHR30188:SF3 40 372 1.1E-124 T 22-04-2016 SCD_RS07495 c9fa50c2b1fe08db017761455b5aa605 378 Pfam PF02405 Permease MlaE 163 372 2.5E-73 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 SCD_RS07495 c9fa50c2b1fe08db017761455b5aa605 378 PANTHER PTHR30188 40 372 1.1E-124 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 SCD_RS07495 c9fa50c2b1fe08db017761455b5aa605 378 Gene3D G3DSA:3.30.750.24 14 100 5.4E-7 T 22-04-2016 IPR002645 STAS domain SCD_RS07495 c9fa50c2b1fe08db017761455b5aa605 378 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 135 374 1.5E-75 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria SCD_RS02385 87b380cc8a311936517dacba37ea27eb 234 Gene3D G3DSA:3.30.420.10 37 214 2.7E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS02385 87b380cc8a311936517dacba37ea27eb 234 SUPERFAMILY SSF53098 34 211 3.0E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS02385 87b380cc8a311936517dacba37ea27eb 234 Pfam PF00929 Exonuclease 43 202 1.4E-17 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SCD_RS02385 87b380cc8a311936517dacba37ea27eb 234 PANTHER PTHR30231 4 205 1.4E-30 T 22-04-2016 SCD_RS02385 87b380cc8a311936517dacba37ea27eb 234 SMART SM00479 41 211 1.2E-23 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SCD_RS01035 17bfe53b4109181282b8fbb71f36b580 426 Gene3D G3DSA:3.20.20.140 69 388 1.4E-90 T 22-04-2016 SCD_RS01035 17bfe53b4109181282b8fbb71f36b580 426 PANTHER PTHR11647 1 423 1.1E-138 T 22-04-2016 SCD_RS01035 17bfe53b4109181282b8fbb71f36b580 426 SUPERFAMILY SSF51556 56 367 6.29E-93 T 22-04-2016 IPR032466 Metal-dependent hydrolase SCD_RS01035 17bfe53b4109181282b8fbb71f36b580 426 SUPERFAMILY SSF51338 1 55 9.09E-30 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SCD_RS01035 17bfe53b4109181282b8fbb71f36b580 426 SUPERFAMILY SSF51338 367 423 9.09E-30 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SCD_RS01035 17bfe53b4109181282b8fbb71f36b580 426 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 19 424 2.1E-103 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS01035 17bfe53b4109181282b8fbb71f36b580 426 Hamap MF_00220_B Dihydroorotase [pyrC]. 2 425 33.624 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SCD_RS01035 17bfe53b4109181282b8fbb71f36b580 426 Gene3D G3DSA:2.30.40.10 2 68 4.8E-16 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SCD_RS01035 17bfe53b4109181282b8fbb71f36b580 426 PANTHER PTHR11647:SF70 1 423 1.1E-138 T 22-04-2016 SCD_RS01035 17bfe53b4109181282b8fbb71f36b580 426 Pfam PF01979 Amidohydrolase family 52 421 2.8E-14 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SCD_RS06070 00a8f9bacabacab7636519386a313e8c 444 Pfam PF00072 Response regulator receiver domain 6 115 1.0E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS06070 00a8f9bacabacab7636519386a313e8c 444 Gene3D G3DSA:3.40.50.300 128 302 8.6E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06070 00a8f9bacabacab7636519386a313e8c 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 401 418 1.42E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS06070 00a8f9bacabacab7636519386a313e8c 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 418 438 1.42E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS06070 00a8f9bacabacab7636519386a313e8c 444 Gene3D G3DSA:3.40.50.2300 2 124 3.9E-35 T 22-04-2016 SCD_RS06070 00a8f9bacabacab7636519386a313e8c 444 SUPERFAMILY SSF52540 134 371 2.35E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06070 00a8f9bacabacab7636519386a313e8c 444 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 216 231 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SCD_RS06070 00a8f9bacabacab7636519386a313e8c 444 SMART SM00448 4 115 2.8E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS06070 00a8f9bacabacab7636519386a313e8c 444 Gene3D G3DSA:1.10.10.60 395 434 4.0E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS06070 00a8f9bacabacab7636519386a313e8c 444 PANTHER PTHR32071:SF21 6 435 2.1E-208 T 22-04-2016 IPR029995 Transcriptional regulatory protein FlbD GO:0003700|GO:0006355 SCD_RS06070 00a8f9bacabacab7636519386a313e8c 444 Gene3D G3DSA:1.10.8.60 303 371 1.8E-22 T 22-04-2016 SCD_RS06070 00a8f9bacabacab7636519386a313e8c 444 SUPERFAMILY SSF46689 343 435 1.7E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS06070 00a8f9bacabacab7636519386a313e8c 444 SUPERFAMILY SSF52172 1 173 9.11E-42 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS06070 00a8f9bacabacab7636519386a313e8c 444 Pfam PF00158 Sigma-54 interaction domain 132 296 6.0E-68 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SCD_RS06070 00a8f9bacabacab7636519386a313e8c 444 SMART SM00382 150 294 1.4E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS06070 00a8f9bacabacab7636519386a313e8c 444 PANTHER PTHR32071 6 435 2.1E-208 T 22-04-2016 SCD_RS06070 00a8f9bacabacab7636519386a313e8c 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 343 352 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SCD_RS06070 00a8f9bacabacab7636519386a313e8c 444 Pfam PF02954 Bacterial regulatory protein, Fis family 397 435 4.1E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS10340 6b48827e9f2548148448fa5407c6a6a9 318 Pfam PF01471 Putative peptidoglycan binding domain 9 65 3.5E-17 T 22-04-2016 IPR002477 Peptidoglycan binding-like SCD_RS10340 6b48827e9f2548148448fa5407c6a6a9 318 Gene3D G3DSA:1.10.101.10 2 67 9.1E-23 T 22-04-2016 IPR002477 Peptidoglycan binding-like SCD_RS10340 6b48827e9f2548148448fa5407c6a6a9 318 SUPERFAMILY SSF47090 3 66 1.2E-20 T 22-04-2016 IPR002477 Peptidoglycan binding-like SCD_RS09835 cf67db43db745e2d2ad1f60c7c749415 366 Pfam PF10442 FIST C domain 200 342 3.6E-18 T 22-04-2016 IPR019494 FIST, C-domain SCD_RS09835 cf67db43db745e2d2ad1f60c7c749415 366 Pfam PF08495 FIST N domain 37 195 1.1E-6 T 22-04-2016 IPR013702 FIST domain, N-terminal SCD_RS09835 cf67db43db745e2d2ad1f60c7c749415 366 SMART SM01204 199 343 1.0E-20 T 22-04-2016 IPR019494 FIST, C-domain SCD_RS09835 cf67db43db745e2d2ad1f60c7c749415 366 SMART SM00897 34 198 1.9E-4 T 22-04-2016 IPR013702 FIST domain, N-terminal SCD_RS13980 6222fc04888ddbbe8d88fd22a3fc9b65 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 130 1.4E-26 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SCD_RS13980 6222fc04888ddbbe8d88fd22a3fc9b65 134 PANTHER PTHR30558:SF10 1 131 2.2E-29 T 22-04-2016 SCD_RS13980 6222fc04888ddbbe8d88fd22a3fc9b65 134 PANTHER PTHR30558 1 131 2.2E-29 T 22-04-2016 SCD_RS07125 5d474f054278efa0a188475e8b2047ff 334 Gene3D G3DSA:2.40.50.100 205 238 7.0E-14 T 22-04-2016 SCD_RS07125 5d474f054278efa0a188475e8b2047ff 334 Gene3D G3DSA:2.40.50.100 50 78 7.0E-14 T 22-04-2016 SCD_RS07125 5d474f054278efa0a188475e8b2047ff 334 SUPERFAMILY SSF111369 49 108 7.98E-8 T 22-04-2016 SCD_RS07125 5d474f054278efa0a188475e8b2047ff 334 PANTHER PTHR32347 5 329 2.0E-72 T 22-04-2016 SCD_RS07125 5d474f054278efa0a188475e8b2047ff 334 PANTHER PTHR32347:SF12 5 329 2.0E-72 T 22-04-2016 SCD_RS07125 5d474f054278efa0a188475e8b2047ff 334 SUPERFAMILY SSF111369 178 326 2.35E-11 T 22-04-2016 SCD_RS07125 5d474f054278efa0a188475e8b2047ff 334 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 322 1.9E-20 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SCD_RS00085 9739b37225bdf7e5240a6cb03030ba50 280 Gene3D G3DSA:3.40.50.1010 4 156 2.1E-45 T 22-04-2016 IPR029060 PIN domain-like SCD_RS00085 9739b37225bdf7e5240a6cb03030ba50 280 PANTHER PTHR35811 5 279 1.4E-24 T 22-04-2016 SCD_RS00085 9739b37225bdf7e5240a6cb03030ba50 280 PANTHER PTHR35811:SF1 5 279 1.4E-24 T 22-04-2016 SCD_RS00085 9739b37225bdf7e5240a6cb03030ba50 280 Pfam PF12872 OST-HTH/LOTUS domain 219 270 3.5E-5 T 22-04-2016 IPR025605 OST-HTH/LOTUS domain SCD_RS00085 9739b37225bdf7e5240a6cb03030ba50 280 Pfam PF01936 NYN domain 10 153 3.6E-35 T 22-04-2016 IPR021139 NYN domain, limkain-b1-type SCD_RS01675 0ff63a4745206fe5a107db938c39a1a0 699 PANTHER PTHR23150:SF24 1 480 2.9E-190 T 22-04-2016 SCD_RS01675 0ff63a4745206fe5a107db938c39a1a0 699 Pfam PF12867 DinB superfamily 27 162 4.7E-13 T 22-04-2016 IPR024775 DinB-like domain SCD_RS01675 0ff63a4745206fe5a107db938c39a1a0 699 SUPERFAMILY SSF53335 459 664 3.38E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS01675 0ff63a4745206fe5a107db938c39a1a0 699 TIGRFAM TIGR04345 ovoA_Cterm: putative 4-mercaptohistidine N1-methyltranferase 456 697 1.1E-105 T 22-04-2016 IPR027625 Putative 4-mercaptohistidine N1-methyltranferase, OvoA C-terminal domain SCD_RS01675 0ff63a4745206fe5a107db938c39a1a0 699 TIGRFAM TIGR04344 ovoA_Nterm: 5-histidylcysteine sulfoxide synthase 9 443 6.3E-210 T 22-04-2016 IPR027577 5-histidylcysteine sulfoxide synthase SCD_RS01675 0ff63a4745206fe5a107db938c39a1a0 699 Gene3D G3DSA:3.40.50.150 472 663 2.0E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS01675 0ff63a4745206fe5a107db938c39a1a0 699 Gene3D G3DSA:3.90.1580.10 182 448 7.1E-56 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme SCD_RS01675 0ff63a4745206fe5a107db938c39a1a0 699 Pfam PF13847 Methyltransferase domain 496 636 5.0E-12 T 22-04-2016 IPR025714 Methyltransferase domain SCD_RS01675 0ff63a4745206fe5a107db938c39a1a0 699 SUPERFAMILY SSF56436 192 444 2.35E-55 T 22-04-2016 IPR016187 C-type lectin fold SCD_RS01675 0ff63a4745206fe5a107db938c39a1a0 699 PANTHER PTHR23150 1 480 2.9E-190 T 22-04-2016 SCD_RS01675 0ff63a4745206fe5a107db938c39a1a0 699 Pfam PF03781 Sulfatase-modifying factor enzyme 1 194 443 1.2E-26 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme SCD_RS06760 afa00cc02a6f2129ce221f60087152db 128 Pfam PF00085 Thioredoxin 7 106 1.1E-19 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 SCD_RS06760 afa00cc02a6f2129ce221f60087152db 128 PANTHER PTHR10438:SF281 5 113 5.3E-27 T 22-04-2016 SCD_RS06760 afa00cc02a6f2129ce221f60087152db 128 Gene3D G3DSA:3.40.30.10 6 109 1.0E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS06760 afa00cc02a6f2129ce221f60087152db 128 SUPERFAMILY SSF52833 7 113 2.75E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS06760 afa00cc02a6f2129ce221f60087152db 128 PANTHER PTHR10438 5 113 5.3E-27 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SCD_RS07535 d64d6d156946678eee4ae3bb32c8658a 131 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 6 109 2.3E-29 T 22-04-2016 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV SCD_RS07535 d64d6d156946678eee4ae3bb32c8658a 131 PANTHER PTHR37309 6 125 1.8E-32 T 22-04-2016 SCD_RS07535 d64d6d156946678eee4ae3bb32c8658a 131 PANTHER PTHR37309:SF1 6 125 1.8E-32 T 22-04-2016 SCD_RS07250 98208b9089d2154e1b0724dac9ce62bd 206 Pfam PF08668 HDOD domain 7 123 4.3E-10 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS07250 98208b9089d2154e1b0724dac9ce62bd 206 SUPERFAMILY SSF109604 2 201 8.79E-33 T 22-04-2016 SCD_RS07250 98208b9089d2154e1b0724dac9ce62bd 206 PANTHER PTHR33525 10 167 9.2E-24 T 22-04-2016 SCD_RS07250 98208b9089d2154e1b0724dac9ce62bd 206 Gene3D G3DSA:1.10.3150.10 2 158 4.7E-28 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS07250 98208b9089d2154e1b0724dac9ce62bd 206 PANTHER PTHR33525:SF4 10 167 9.2E-24 T 22-04-2016 SCD_RS05975 7a052a705768ce6ecae03484d19b4685 1250 PANTHER PTHR36985 1 1250 2.1E-91 T 22-04-2016 SCD_RS05975 7a052a705768ce6ecae03484d19b4685 1250 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 914 1249 1.6E-56 T 22-04-2016 IPR007452 Translocation and assembly module TamB SCD_RS04350 bf7a8460a9bc04efe2902d1d2d07e460 354 Gene3D G3DSA:3.40.718.10 2 354 7.8E-131 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SCD_RS04350 bf7a8460a9bc04efe2902d1d2d07e460 354 SUPERFAMILY SSF53659 2 354 2.3E-124 T 22-04-2016 SCD_RS04350 bf7a8460a9bc04efe2902d1d2d07e460 354 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 241 260 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SCD_RS04350 bf7a8460a9bc04efe2902d1d2d07e460 354 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 1 354 52.048 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 SCD_RS04350 bf7a8460a9bc04efe2902d1d2d07e460 354 PANTHER PTHR11835 1 354 8.4E-201 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SCD_RS04350 bf7a8460a9bc04efe2902d1d2d07e460 354 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 3 350 4.8E-138 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SCD_RS04350 bf7a8460a9bc04efe2902d1d2d07e460 354 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 2 349 5.8E-157 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 SCD_RS04350 bf7a8460a9bc04efe2902d1d2d07e460 354 SMART SM01329 2 350 1.1E-209 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SCD_RS04350 bf7a8460a9bc04efe2902d1d2d07e460 354 PANTHER PTHR11835:SF35 1 354 8.4E-201 T 22-04-2016 SCD_RS06280 164eb43e8d4a5ac55273ecce95a80e71 236 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 1 235 65.264 T 22-04-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SCD_RS06280 164eb43e8d4a5ac55273ecce95a80e71 236 SUPERFAMILY SSF88659 85 159 6.98E-14 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS06280 164eb43e8d4a5ac55273ecce95a80e71 236 Gene3D G3DSA:1.10.10.10 84 131 3.2E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS06280 164eb43e8d4a5ac55273ecce95a80e71 236 PANTHER PTHR30385 9 235 6.7E-65 T 22-04-2016 SCD_RS06280 164eb43e8d4a5ac55273ecce95a80e71 236 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 13 233 8.8E-85 T 22-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SCD_RS06280 164eb43e8d4a5ac55273ecce95a80e71 236 PRINTS PR00046 Major sigma-70 factor signature 185 197 4.7E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS06280 164eb43e8d4a5ac55273ecce95a80e71 236 PRINTS PR00046 Major sigma-70 factor signature 202 217 4.7E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS06280 164eb43e8d4a5ac55273ecce95a80e71 236 PRINTS PR00046 Major sigma-70 factor signature 39 52 4.7E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS06280 164eb43e8d4a5ac55273ecce95a80e71 236 PRINTS PR00046 Major sigma-70 factor signature 63 71 4.7E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS06280 164eb43e8d4a5ac55273ecce95a80e71 236 PRINTS PR00046 Major sigma-70 factor signature 217 228 4.7E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS06280 164eb43e8d4a5ac55273ecce95a80e71 236 Pfam PF04545 Sigma-70, region 4 181 229 4.5E-16 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS06280 164eb43e8d4a5ac55273ecce95a80e71 236 PANTHER PTHR30385:SF7 9 235 6.7E-65 T 22-04-2016 SCD_RS06280 164eb43e8d4a5ac55273ecce95a80e71 236 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 232 6.0E-34 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS06280 164eb43e8d4a5ac55273ecce95a80e71 236 Pfam PF04542 Sigma-70 region 2 14 81 8.1E-18 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS06280 164eb43e8d4a5ac55273ecce95a80e71 236 Gene3D G3DSA:1.10.10.10 170 234 3.3E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS06280 164eb43e8d4a5ac55273ecce95a80e71 236 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 39 52 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS06280 164eb43e8d4a5ac55273ecce95a80e71 236 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 202 228 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS06280 164eb43e8d4a5ac55273ecce95a80e71 236 PIRSF PIRSF000770 2 236 2.6E-41 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 SCD_RS06280 164eb43e8d4a5ac55273ecce95a80e71 236 SUPERFAMILY SSF88659 146 234 1.38E-20 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS06280 164eb43e8d4a5ac55273ecce95a80e71 236 SUPERFAMILY SSF88946 7 84 2.09E-25 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS06280 164eb43e8d4a5ac55273ecce95a80e71 236 Gene3D G3DSA:1.10.601.10 9 76 1.3E-16 T 22-04-2016 SCD_RS06280 164eb43e8d4a5ac55273ecce95a80e71 236 Pfam PF04539 Sigma-70 region 3 92 155 2.3E-11 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SCD_RS09915 64dc785ae1cdbdd53a304878be6a414b 89 PANTHER PTHR34702 1 89 4.0E-17 T 22-04-2016 SCD_RS09915 64dc785ae1cdbdd53a304878be6a414b 89 PIRSF PIRSF028784 1 89 8.5E-27 T 22-04-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 SCD_RS09915 64dc785ae1cdbdd53a304878be6a414b 89 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 32 82 9.1E-20 T 22-04-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 SCD_RS09915 64dc785ae1cdbdd53a304878be6a414b 89 PANTHER PTHR34702:SF1 1 89 4.0E-17 T 22-04-2016 SCD_RS01860 36988f4b3446fbdac6c93a9e4af9a6dc 387 PANTHER PTHR11228 27 249 4.1E-74 T 22-04-2016 SCD_RS01860 36988f4b3446fbdac6c93a9e4af9a6dc 387 PANTHER PTHR11228 271 380 4.1E-74 T 22-04-2016 SCD_RS01860 36988f4b3446fbdac6c93a9e4af9a6dc 387 Pfam PF13353 4Fe-4S single cluster domain 29 118 4.7E-9 T 22-04-2016 SCD_RS01860 36988f4b3446fbdac6c93a9e4af9a6dc 387 Pfam PF04055 Radical SAM superfamily 32 173 1.3E-20 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SCD_RS01860 36988f4b3446fbdac6c93a9e4af9a6dc 387 TIGRFAM TIGR04051 rSAM_NirJ: heme d1 biosynthesis radical SAM protein NirJ 25 378 2.4E-197 T 22-04-2016 IPR023992 Heme D1 biosynthesis, radical SAM protein NirJ SCD_RS01860 36988f4b3446fbdac6c93a9e4af9a6dc 387 PANTHER PTHR11228:SF7 27 249 4.1E-74 T 22-04-2016 SCD_RS01860 36988f4b3446fbdac6c93a9e4af9a6dc 387 PANTHER PTHR11228:SF7 271 380 4.1E-74 T 22-04-2016 SCD_RS01860 36988f4b3446fbdac6c93a9e4af9a6dc 387 PIRSF PIRSF037420 15 386 1.1E-138 T 22-04-2016 IPR017200 Coenzyme PQQ synthesis protein E UniPathway: UPA00539 SCD_RS01860 36988f4b3446fbdac6c93a9e4af9a6dc 387 Gene3D G3DSA:3.20.20.70 19 361 1.4E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS01860 36988f4b3446fbdac6c93a9e4af9a6dc 387 SUPERFAMILY SSF102114 23 350 7.98E-70 T 22-04-2016 SCD_RS01860 36988f4b3446fbdac6c93a9e4af9a6dc 387 SMART SM00729 26 228 0.0012 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SCD_RS07445 91f830a425f50aad137ed012cd339bbb 361 PANTHER PTHR12169 15 361 2.8E-157 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 SCD_RS07445 91f830a425f50aad137ed012cd339bbb 361 Gene3D G3DSA:3.40.50.300 17 180 2.2E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07445 91f830a425f50aad137ed012cd339bbb 361 Pfam PF03969 AFG1-like ATPase 11 357 7.2E-139 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 SCD_RS07445 91f830a425f50aad137ed012cd339bbb 361 PANTHER PTHR12169:SF11 15 361 2.8E-157 T 22-04-2016 SCD_RS07445 91f830a425f50aad137ed012cd339bbb 361 SUPERFAMILY SSF52540 50 202 3.78E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS11235 4f21327c9b968167c8bc6758def8c383 489 SUPERFAMILY SSF103473 278 473 1.7E-52 T 22-04-2016 IPR020846 Major facilitator superfamily domain SCD_RS11235 4f21327c9b968167c8bc6758def8c383 489 SUPERFAMILY SSF103473 10 207 1.7E-52 T 22-04-2016 IPR020846 Major facilitator superfamily domain SCD_RS11235 4f21327c9b968167c8bc6758def8c383 489 ProSitePatterns PS00216 Sugar transport proteins signature 1. 349 365 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SCD_RS11235 4f21327c9b968167c8bc6758def8c383 489 Pfam PF07690 Major Facilitator Superfamily 303 473 3.0E-10 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SCD_RS11235 4f21327c9b968167c8bc6758def8c383 489 Pfam PF07690 Major Facilitator Superfamily 22 225 5.9E-23 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SCD_RS11235 4f21327c9b968167c8bc6758def8c383 489 Gene3D G3DSA:1.20.1250.20 15 199 6.4E-27 T 22-04-2016 SCD_RS11235 4f21327c9b968167c8bc6758def8c383 489 PANTHER PTHR23515:SF2 283 474 1.2E-81 T 22-04-2016 SCD_RS11235 4f21327c9b968167c8bc6758def8c383 489 PANTHER PTHR23515:SF2 2 217 1.2E-81 T 22-04-2016 SCD_RS11235 4f21327c9b968167c8bc6758def8c383 489 PANTHER PTHR23515 283 474 1.2E-81 T 22-04-2016 SCD_RS11235 4f21327c9b968167c8bc6758def8c383 489 PANTHER PTHR23515 2 217 1.2E-81 T 22-04-2016 SCD_RS11235 4f21327c9b968167c8bc6758def8c383 489 Gene3D G3DSA:1.20.1250.20 295 472 1.0E-20 T 22-04-2016 SCD_RS06120 be7e3613937726b3249c34ea7c8cfcb1 167 Gene3D G3DSA:2.30.330.10 81 166 3.3E-38 T 22-04-2016 SCD_RS06120 be7e3613937726b3249c34ea7c8cfcb1 167 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 86 156 2.2E-24 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) SCD_RS06120 be7e3613937726b3249c34ea7c8cfcb1 167 PANTHER PTHR22617 82 165 7.9E-30 T 22-04-2016 SCD_RS06120 be7e3613937726b3249c34ea7c8cfcb1 167 PRINTS PR00956 Flagellar motor switch protein FliN signature 86 102 1.5E-28 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SCD_RS06120 be7e3613937726b3249c34ea7c8cfcb1 167 PRINTS PR00956 Flagellar motor switch protein FliN signature 132 147 1.5E-28 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SCD_RS06120 be7e3613937726b3249c34ea7c8cfcb1 167 PRINTS PR00956 Flagellar motor switch protein FliN signature 119 132 1.5E-28 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SCD_RS06120 be7e3613937726b3249c34ea7c8cfcb1 167 PRINTS PR00956 Flagellar motor switch protein FliN signature 103 119 1.5E-28 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SCD_RS06120 be7e3613937726b3249c34ea7c8cfcb1 167 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 83 157 3.3E-32 T 22-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 SCD_RS06120 be7e3613937726b3249c34ea7c8cfcb1 167 SUPERFAMILY SSF101801 82 165 1.1E-25 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) SCD_RS09785 4a5d8896c6d8db59ccb784f827323395 370 PANTHER PTHR10160 1 361 1.5E-190 T 22-04-2016 SCD_RS09785 4a5d8896c6d8db59ccb784f827323395 370 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 369 2.6E-155 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 SCD_RS09785 4a5d8896c6d8db59ccb784f827323395 370 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 22-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 SCD_RS09785 4a5d8896c6d8db59ccb784f827323395 370 SMART SM01002 148 296 2.8E-85 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain SCD_RS09785 4a5d8896c6d8db59ccb784f827323395 370 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 6.9E-45 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal SCD_RS09785 4a5d8896c6d8db59ccb784f827323395 370 Gene3D G3DSA:3.40.50.1770 189 357 7.5E-27 T 22-04-2016 SCD_RS09785 4a5d8896c6d8db59ccb784f827323395 370 PIRSF PIRSF000183 1 370 1.6E-150 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 SCD_RS09785 4a5d8896c6d8db59ccb784f827323395 370 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 351 2.8E-79 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain SCD_RS09785 4a5d8896c6d8db59ccb784f827323395 370 Gene3D G3DSA:3.40.50.1770 3 188 1.1E-58 T 22-04-2016 SCD_RS09785 4a5d8896c6d8db59ccb784f827323395 370 SMART SM01003 4 136 4.3E-74 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal SCD_RS09785 4a5d8896c6d8db59ccb784f827323395 370 SUPERFAMILY SSF52283 1 136 6.63E-65 T 22-04-2016 SCD_RS09785 4a5d8896c6d8db59ccb784f827323395 370 SUPERFAMILY SSF52283 304 358 6.63E-65 T 22-04-2016 SCD_RS09785 4a5d8896c6d8db59ccb784f827323395 370 SUPERFAMILY SSF51735 136 301 1.38E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS09285 a9b5f4acc73c848bb154d1724495d666 409 SUPERFAMILY SSF109604 162 328 3.14E-32 T 22-04-2016 SCD_RS09285 a9b5f4acc73c848bb154d1724495d666 409 Gene3D G3DSA:1.10.3210.10 155 324 9.0E-26 T 22-04-2016 IPR006674 HD domain SCD_RS09285 a9b5f4acc73c848bb154d1724495d666 409 Pfam PF01966 HD domain 168 289 3.5E-12 T 22-04-2016 IPR006674 HD domain SCD_RS09285 a9b5f4acc73c848bb154d1724495d666 409 Pfam PF11871 Domain of unknown function (DUF3391) 2 136 6.8E-37 T 22-04-2016 IPR021812 Protein of unknown function DUF3391 SCD_RS09285 a9b5f4acc73c848bb154d1724495d666 409 SMART SM00471 163 299 5.4E-10 T 22-04-2016 IPR003607 HD/PDEase domain SCD_RS04680 815606212cf0ee355ae7833e69d354e6 195 PANTHER PTHR10884 13 176 6.8E-68 T 22-04-2016 SCD_RS04680 815606212cf0ee355ae7833e69d354e6 195 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 31 158 1.3E-45 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 SCD_RS04680 815606212cf0ee355ae7833e69d354e6 195 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 119 140 - T 22-04-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 SCD_RS04680 815606212cf0ee355ae7833e69d354e6 195 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 29 156 2.1E-42 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 SCD_RS04680 815606212cf0ee355ae7833e69d354e6 195 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 85 146 4.0E-14 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 SCD_RS04680 815606212cf0ee355ae7833e69d354e6 195 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 10 166 35.07 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 SCD_RS04680 815606212cf0ee355ae7833e69d354e6 195 SUPERFAMILY SSF143243 8 180 8.63E-57 T 22-04-2016 SCD_RS13060 617e8157d06056cd812a4e77f69faca8 302 Pfam PF02687 FtsX-like permease family 176 298 1.2E-7 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SCD_RS13060 617e8157d06056cd812a4e77f69faca8 302 PIRSF PIRSF003097 1 297 2.4E-66 T 22-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 SCD_RS09855 a3b0b196f4d0c799ce6b88eda96261c7 236 Gene3D G3DSA:2.40.50.140 152 218 9.1E-4 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS02150 a311e9e748a302c2f6d6030040df2c09 316 SMART SM00729 23 250 6.9E-46 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SCD_RS02150 a311e9e748a302c2f6d6030040df2c09 316 Pfam PF16199 Radical_SAM C-terminal domain 211 294 7.8E-27 T 22-04-2016 IPR032432 Radical SAM, C-terminal extension SCD_RS02150 a311e9e748a302c2f6d6030040df2c09 316 Pfam PF04055 Radical SAM superfamily 44 204 1.2E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SCD_RS02150 a311e9e748a302c2f6d6030040df2c09 316 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 7 303 5.9E-112 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 SCD_RS02150 a311e9e748a302c2f6d6030040df2c09 316 PANTHER PTHR11135:SF1 1 313 6.3E-134 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 SCD_RS02150 a311e9e748a302c2f6d6030040df2c09 316 SUPERFAMILY SSF102114 14 271 1.31E-49 T 22-04-2016 SCD_RS02150 a311e9e748a302c2f6d6030040df2c09 316 PANTHER PTHR11135 1 313 6.3E-134 T 22-04-2016 SCD_RS02150 a311e9e748a302c2f6d6030040df2c09 316 Gene3D G3DSA:3.80.30.20 32 255 8.8E-32 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SCD_RS00965 d4ec7aa1c13d1b9d23643a963c172093 150 Pfam PF13511 Domain of unknown function (DUF4124) 10 59 3.9E-11 T 22-04-2016 IPR025392 Domain of unknown function DUF4124 SCD_RS01195 957b83c83dbd2e443e384441178b607c 179 Gene3D G3DSA:3.30.420.10 2 148 3.6E-29 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS01195 957b83c83dbd2e443e384441178b607c 179 Pfam PF00929 Exonuclease 2 140 1.6E-14 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SCD_RS01195 957b83c83dbd2e443e384441178b607c 179 SMART SM00479 1 149 4.9E-12 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SCD_RS01195 957b83c83dbd2e443e384441178b607c 179 PANTHER PTHR30231 1 161 6.9E-22 T 22-04-2016 SCD_RS01195 957b83c83dbd2e443e384441178b607c 179 SUPERFAMILY SSF53098 2 155 1.94E-25 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS06605 5671f6565fbc5de409101c6d5532aedd 434 TIGRFAM TIGR03790 TIGR03790: TIGR03790 family protein 55 342 4.2E-78 T 22-04-2016 IPR022265 Conserved hypothetical protein CHP03790 SCD_RS10215 71bbe802fe6868bfaa3c943b2b8ae2da 342 SUPERFAMILY SSF54197 159 267 2.55E-7 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SCD_RS10215 71bbe802fe6868bfaa3c943b2b8ae2da 342 PANTHER PTHR20884 173 339 3.4E-16 T 22-04-2016 IPR026506 GDP-L-galactose/GDP-D-glucose phosphorylase GO:0080048 SCD_RS04155 5c4ace7fe72294bb708c1e93cf9f3b18 448 SUPERFAMILY SSF111283 14 447 3.79E-134 T 22-04-2016 SCD_RS04155 5c4ace7fe72294bb708c1e93cf9f3b18 448 PANTHER PTHR30624 7 448 3.7E-164 T 22-04-2016 SCD_RS04155 5c4ace7fe72294bb708c1e93cf9f3b18 448 PANTHER PTHR30624:SF1 7 448 3.7E-164 T 22-04-2016 SCD_RS04155 5c4ace7fe72294bb708c1e93cf9f3b18 448 Pfam PF01523 Putative modulator of DNA gyrase 34 325 7.5E-58 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SCD_RS03170 aaf3e69fab96f59b640797a1d72725ae 101 Gene3D G3DSA:4.10.830.10 41 101 1.3E-30 T 22-04-2016 SCD_RS03170 aaf3e69fab96f59b640797a1d72725ae 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.999 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid SCD_RS03170 aaf3e69fab96f59b640797a1d72725ae 101 PANTHER PTHR19836 1 101 1.4E-56 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03170 aaf3e69fab96f59b640797a1d72725ae 101 SUPERFAMILY SSF57716 2 101 3.99E-38 T 22-04-2016 SCD_RS03170 aaf3e69fab96f59b640797a1d72725ae 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 5.7E-27 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS08650 23fe971ebc3c93308f80a0b3f070bb40 514 PANTHER PTHR33908:SF3 13 497 1.5E-74 T 22-04-2016 SCD_RS08650 23fe971ebc3c93308f80a0b3f070bb40 514 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 66 225 2.0E-22 T 22-04-2016 SCD_RS08650 23fe971ebc3c93308f80a0b3f070bb40 514 PANTHER PTHR33908 13 497 1.5E-74 T 22-04-2016 SCD_RS00865 502a15c5fd361bed476d42eb1050a7de 212 Gene3D G3DSA:1.10.357.10 12 208 3.5E-44 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SCD_RS00865 502a15c5fd361bed476d42eb1050a7de 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 1.1E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SCD_RS00865 502a15c5fd361bed476d42eb1050a7de 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 1.1E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SCD_RS00865 502a15c5fd361bed476d42eb1050a7de 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 4.2E-19 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SCD_RS00865 502a15c5fd361bed476d42eb1050a7de 212 PANTHER PTHR30055 4 170 3.3E-32 T 22-04-2016 SCD_RS00865 502a15c5fd361bed476d42eb1050a7de 212 ProSitePatterns PS01081 TetR-type HTH domain signature. 33 63 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SCD_RS00865 502a15c5fd361bed476d42eb1050a7de 212 SUPERFAMILY SSF46689 13 93 5.64E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS00865 502a15c5fd361bed476d42eb1050a7de 212 SUPERFAMILY SSF48498 90 199 1.03E-13 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SCD_RS07930 d9c7a463032da15dd31b70d2e281575a 235 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 85 118 1.5E-10 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 SCD_RS07930 d9c7a463032da15dd31b70d2e281575a 235 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 73 9.9E-17 T 22-04-2016 SCD_RS07930 d9c7a463032da15dd31b70d2e281575a 235 SUPERFAMILY SSF54862 79 211 3.89E-26 T 22-04-2016 SCD_RS07930 d9c7a463032da15dd31b70d2e281575a 235 PANTHER PTHR11615:SF38 4 230 3.5E-35 T 22-04-2016 SCD_RS07930 d9c7a463032da15dd31b70d2e281575a 235 PANTHER PTHR11615 4 230 3.5E-35 T 22-04-2016 SCD_RS07930 d9c7a463032da15dd31b70d2e281575a 235 SMART SM00929 82 122 5.1E-12 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 SCD_RS07930 d9c7a463032da15dd31b70d2e281575a 235 Gene3D G3DSA:3.10.20.30 4 49 1.6E-7 T 22-04-2016 IPR012675 Beta-grasp domain SCD_RS07930 d9c7a463032da15dd31b70d2e281575a 235 Gene3D G3DSA:3.10.20.30 50 70 4.5E-6 T 22-04-2016 IPR012675 Beta-grasp domain SCD_RS07930 d9c7a463032da15dd31b70d2e281575a 235 Gene3D G3DSA:3.30.70.20 138 209 7.7E-5 T 22-04-2016 SCD_RS07930 d9c7a463032da15dd31b70d2e281575a 235 PIRSF PIRSF000309 1 231 1.4E-75 T 22-04-2016 IPR016214 NAD-reducing hydrogenase, HoxS gamma subunit MetaCyc: PWY-5382|MetaCyc: PWY-6758 SCD_RS07930 d9c7a463032da15dd31b70d2e281575a 235 Pfam PF13459 4Fe-4S single cluster domain 138 206 6.3E-14 T 22-04-2016 SCD_RS07930 d9c7a463032da15dd31b70d2e281575a 235 SUPERFAMILY SSF54292 4 71 1.48E-17 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SCD_RS04735 586984cf7dc8ac728c754966d03d42ed 482 Pfam PF00361 Proton-conducting membrane transporter 125 419 9.7E-79 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SCD_RS04735 586984cf7dc8ac728c754966d03d42ed 482 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 73 98 7.2E-8 T 22-04-2016 SCD_RS04735 586984cf7dc8ac728c754966d03d42ed 482 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 7.2E-8 T 22-04-2016 SCD_RS04735 586984cf7dc8ac728c754966d03d42ed 482 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 308 320 7.2E-8 T 22-04-2016 SCD_RS04735 586984cf7dc8ac728c754966d03d42ed 482 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 413 432 7.2E-8 T 22-04-2016 SCD_RS04735 586984cf7dc8ac728c754966d03d42ed 482 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 470 18.883 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 SCD_RS04735 586984cf7dc8ac728c754966d03d42ed 482 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 10 470 1.1E-152 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 SCD_RS04735 586984cf7dc8ac728c754966d03d42ed 482 PANTHER PTHR22773:SF41 1 478 5.7E-176 T 22-04-2016 SCD_RS04735 586984cf7dc8ac728c754966d03d42ed 482 PANTHER PTHR22773 1 478 5.7E-176 T 22-04-2016 SCD_RS02675 72ada4a9a5a494542b5fe9279f902e69 293 PANTHER PTHR11562:SF55 2 293 3.3E-92 T 22-04-2016 SCD_RS02675 72ada4a9a5a494542b5fe9279f902e69 293 SUPERFAMILY SSF160240 210 288 7.46E-21 T 22-04-2016 SCD_RS02675 72ada4a9a5a494542b5fe9279f902e69 293 Pfam PF16916 Dimerisation domain of Zinc Transporter 212 287 2.0E-23 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain SCD_RS02675 72ada4a9a5a494542b5fe9279f902e69 293 Gene3D G3DSA:3.30.70.1350 207 289 1.1E-25 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain SCD_RS02675 72ada4a9a5a494542b5fe9279f902e69 293 SUPERFAMILY SSF161111 5 207 3.01E-51 T 22-04-2016 SCD_RS02675 72ada4a9a5a494542b5fe9279f902e69 293 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 8 289 2.6E-68 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SCD_RS02675 72ada4a9a5a494542b5fe9279f902e69 293 Gene3D G3DSA:1.20.1510.10 9 206 1.2E-43 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain SCD_RS02675 72ada4a9a5a494542b5fe9279f902e69 293 PANTHER PTHR11562 2 293 3.3E-92 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SCD_RS02675 72ada4a9a5a494542b5fe9279f902e69 293 Pfam PF01545 Cation efflux family 11 206 1.3E-40 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SCD_RS14605 300e0b847de079821133a8d117986595 329 TIGRFAM TIGR03018 pepcterm_TyrKin: exopolysaccharide/PEP-CTERM locus tyrosine autokinase 107 314 8.6E-90 T 22-04-2016 SCD_RS14605 300e0b847de079821133a8d117986595 329 SUPERFAMILY SSF52540 143 321 7.87E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14605 300e0b847de079821133a8d117986595 329 PANTHER PTHR32309 145 328 8.0E-33 T 22-04-2016 SCD_RS14605 300e0b847de079821133a8d117986595 329 Gene3D G3DSA:3.40.50.300 142 317 3.4E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14605 300e0b847de079821133a8d117986595 329 Pfam PF13614 AAA domain 145 305 7.6E-10 T 22-04-2016 IPR025669 AAA domain SCD_RS14605 300e0b847de079821133a8d117986595 329 PANTHER PTHR32309:SF13 145 328 8.0E-33 T 22-04-2016 SCD_RS05325 0fef10be538b9bf679997894b169608a 417 Pfam PF07805 HipA-like N-terminal domain 185 256 3.0E-10 T 22-04-2016 IPR012894 HipA, N-terminal subdomain 2 SCD_RS05325 0fef10be538b9bf679997894b169608a 417 Pfam PF13657 HipA N-terminal domain 25 101 2.1E-5 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 SCD_RS05325 0fef10be538b9bf679997894b169608a 417 Pfam PF07804 HipA-like C-terminal domain 261 392 1.3E-26 T 22-04-2016 IPR012893 HipA-like, C-terminal SCD_RS11060 8caec4f9233a4b4b735589b61ed048b0 369 PANTHER PTHR11695 128 369 1.9E-189 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SCD_RS11060 8caec4f9233a4b4b735589b61ed048b0 369 PANTHER PTHR11695 15 108 1.9E-189 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SCD_RS11060 8caec4f9233a4b4b735589b61ed048b0 369 SUPERFAMILY SSF50129 1 185 1.67E-67 T 22-04-2016 IPR011032 GroES-like SCD_RS11060 8caec4f9233a4b4b735589b61ed048b0 369 Gene3D G3DSA:3.40.50.720 191 311 2.3E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS11060 8caec4f9233a4b4b735589b61ed048b0 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 368 1.4E-199 T 22-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 SCD_RS11060 8caec4f9233a4b4b735589b61ed048b0 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 5.0E-23 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SCD_RS11060 8caec4f9233a4b4b735589b61ed048b0 369 Pfam PF00107 Zinc-binding dehydrogenase 197 326 1.4E-22 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SCD_RS11060 8caec4f9233a4b4b735589b61ed048b0 369 SUPERFAMILY SSF50129 318 369 2.07E-12 T 22-04-2016 IPR011032 GroES-like SCD_RS11060 8caec4f9233a4b4b735589b61ed048b0 369 PANTHER PTHR11695:SF560 128 369 1.9E-189 T 22-04-2016 SCD_RS11060 8caec4f9233a4b4b735589b61ed048b0 369 PANTHER PTHR11695:SF560 15 108 1.9E-189 T 22-04-2016 SCD_RS11060 8caec4f9233a4b4b735589b61ed048b0 369 Gene3D G3DSA:3.90.180.10 2 190 9.6E-68 T 22-04-2016 IPR011032 GroES-like SCD_RS11060 8caec4f9233a4b4b735589b61ed048b0 369 SUPERFAMILY SSF51735 160 334 2.15E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS04125 fe11976778adcd927301b20b26743d58 170 Gene3D G3DSA:3.40.30.10 33 153 1.3E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS04125 fe11976778adcd927301b20b26743d58 170 SUPERFAMILY SSF52833 32 153 1.72E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS04125 fe11976778adcd927301b20b26743d58 170 Pfam PF13098 Thioredoxin-like domain 49 140 1.2E-13 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS09850 a8c0ae26a5050afc4159149639113ff7 571 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 12 404 3.1E-108 T 22-04-2016 IPR003776 YcaO-like domain SCD_RS09850 a8c0ae26a5050afc4159149639113ff7 571 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 60 392 2.1E-78 T 22-04-2016 IPR003776 YcaO-like domain SCD_RS05615 dc5c3ad7655261f0375a3ce048bdbbd5 651 SUPERFAMILY SSF52540 390 636 6.31E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05615 dc5c3ad7655261f0375a3ce048bdbbd5 651 Pfam PF02653 Branched-chain amino acid transport system / permease component 31 293 2.1E-34 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SCD_RS05615 dc5c3ad7655261f0375a3ce048bdbbd5 651 PANTHER PTHR24220 393 636 4.8E-101 T 22-04-2016 SCD_RS05615 dc5c3ad7655261f0375a3ce048bdbbd5 651 Pfam PF00005 ABC transporter 408 565 2.6E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS05615 dc5c3ad7655261f0375a3ce048bdbbd5 651 Gene3D G3DSA:3.40.50.300 388 636 2.3E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05615 dc5c3ad7655261f0375a3ce048bdbbd5 651 PANTHER PTHR24220:SF358 393 636 4.8E-101 T 22-04-2016 SCD_RS05615 dc5c3ad7655261f0375a3ce048bdbbd5 651 SMART SM00382 416 622 1.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS05615 dc5c3ad7655261f0375a3ce048bdbbd5 651 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 614 636 8.9E-13 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal SCD_RS04400 7314fb8d6aa1e00b860e50b610954200 289 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 283 38.819 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SCD_RS04400 7314fb8d6aa1e00b860e50b610954200 289 SUPERFAMILY SSF52096 27 283 2.46E-89 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SCD_RS04400 7314fb8d6aa1e00b860e50b610954200 289 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 285 2.4E-129 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SCD_RS04400 7314fb8d6aa1e00b860e50b610954200 289 PANTHER PTHR22855:SF17 1 286 3.7E-160 T 22-04-2016 SCD_RS04400 7314fb8d6aa1e00b860e50b610954200 289 Pfam PF01039 Carboxyl transferase domain 95 242 1.5E-15 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SCD_RS04400 7314fb8d6aa1e00b860e50b610954200 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 165 183 3.2E-41 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SCD_RS04400 7314fb8d6aa1e00b860e50b610954200 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 231 242 3.2E-41 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SCD_RS04400 7314fb8d6aa1e00b860e50b610954200 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 202 219 3.2E-41 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SCD_RS04400 7314fb8d6aa1e00b860e50b610954200 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 131 145 3.2E-41 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SCD_RS04400 7314fb8d6aa1e00b860e50b610954200 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 253 262 3.2E-41 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SCD_RS04400 7314fb8d6aa1e00b860e50b610954200 289 PANTHER PTHR22855 1 286 3.7E-160 T 22-04-2016 SCD_RS04400 7314fb8d6aa1e00b860e50b610954200 289 Gene3D G3DSA:3.90.226.10 20 283 1.2E-76 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SCD_RS00405 bd72304c6b27357ef7e2a1269ff5fd6d 336 PIRSF PIRSF006268 1 328 5.2E-85 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SCD_RS00405 bd72304c6b27357ef7e2a1269ff5fd6d 336 Pfam PF02424 ApbE family 22 298 2.4E-73 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SCD_RS00405 bd72304c6b27357ef7e2a1269ff5fd6d 336 SUPERFAMILY SSF143631 14 323 6.02E-74 T 22-04-2016 IPR003374 ApbE-like domain SCD_RS00405 bd72304c6b27357ef7e2a1269ff5fd6d 336 PANTHER PTHR30040:SF2 1 330 2.9E-65 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SCD_RS00405 bd72304c6b27357ef7e2a1269ff5fd6d 336 PANTHER PTHR30040 1 330 2.9E-65 T 22-04-2016 SCD_RS12070 cdab7da0c81e5c026887602473a080a4 652 Pfam PF02446 4-alpha-glucanotransferase 68 599 3.6E-37 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SCD_RS12070 cdab7da0c81e5c026887602473a080a4 652 Gene3D G3DSA:3.20.20.80 434 605 4.1E-64 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SCD_RS12070 cdab7da0c81e5c026887602473a080a4 652 Gene3D G3DSA:3.20.20.80 42 385 4.1E-64 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SCD_RS12070 cdab7da0c81e5c026887602473a080a4 652 SUPERFAMILY SSF51445 432 611 8.76E-57 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SCD_RS12070 cdab7da0c81e5c026887602473a080a4 652 SUPERFAMILY SSF51445 42 383 8.76E-57 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SCD_RS07655 63ff2bf877dc74f7bec63ce8074192ca 317 PANTHER PTHR11079 2 317 5.4E-118 T 22-04-2016 SCD_RS07655 63ff2bf877dc74f7bec63ce8074192ca 317 SUPERFAMILY SSF55174 20 71 1.14E-7 T 22-04-2016 SCD_RS07655 63ff2bf877dc74f7bec63ce8074192ca 317 Gene3D G3DSA:3.10.290.10 20 69 5.0E-4 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS07655 63ff2bf877dc74f7bec63ce8074192ca 317 Pfam PF01479 S4 domain 21 57 1.6E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS07655 63ff2bf877dc74f7bec63ce8074192ca 317 SMART SM00363 21 82 1.3E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SCD_RS07655 63ff2bf877dc74f7bec63ce8074192ca 317 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 17 312 3.4E-78 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS07655 63ff2bf877dc74f7bec63ce8074192ca 317 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS07655 63ff2bf877dc74f7bec63ce8074192ca 317 SUPERFAMILY SSF55120 88 314 3.84E-65 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS07655 63ff2bf877dc74f7bec63ce8074192ca 317 PANTHER PTHR11079:SF84 2 317 5.4E-118 T 22-04-2016 SCD_RS07655 63ff2bf877dc74f7bec63ce8074192ca 317 Pfam PF00849 RNA pseudouridylate synthase 102 250 1.3E-27 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SCD_RS02790 8d695effee010af22f0202e3ae5c0977 329 Gene3D G3DSA:3.40.50.10490 15 199 6.3E-53 T 22-04-2016 SCD_RS02790 8d695effee010af22f0202e3ae5c0977 329 PIRSF PIRSF004692 1 329 2.8E-134 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 SCD_RS02790 8d695effee010af22f0202e3ae5c0977 329 Pfam PF01380 SIS domain 46 177 1.0E-32 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SCD_RS02790 8d695effee010af22f0202e3ae5c0977 329 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 50 319 3.7E-109 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 SCD_RS02790 8d695effee010af22f0202e3ae5c0977 329 PANTHER PTHR38418:SF1 1 323 8.9E-37 T 22-04-2016 SCD_RS02790 8d695effee010af22f0202e3ae5c0977 329 Pfam PF00571 CBS domain 273 326 2.8E-10 T 22-04-2016 IPR000644 CBS domain SCD_RS02790 8d695effee010af22f0202e3ae5c0977 329 Pfam PF00571 CBS domain 206 263 3.6E-6 T 22-04-2016 IPR000644 CBS domain SCD_RS02790 8d695effee010af22f0202e3ae5c0977 329 SMART SM00116 215 263 0.059 T 22-04-2016 IPR000644 CBS domain SCD_RS02790 8d695effee010af22f0202e3ae5c0977 329 SMART SM00116 280 328 0.002 T 22-04-2016 IPR000644 CBS domain SCD_RS02790 8d695effee010af22f0202e3ae5c0977 329 Gene3D G3DSA:3.10.580.10 200 326 9.4E-40 T 22-04-2016 SCD_RS02790 8d695effee010af22f0202e3ae5c0977 329 SUPERFAMILY SSF53697 13 327 1.47E-73 T 22-04-2016 SCD_RS02790 8d695effee010af22f0202e3ae5c0977 329 PANTHER PTHR38418 1 323 8.9E-37 T 22-04-2016 SCD_RS05150 bda5b6e647731666e3cddcdefaa02dff 310 Gene3D G3DSA:3.40.1190.20 9 308 1.7E-65 T 22-04-2016 IPR029056 Ribokinase-like SCD_RS05150 bda5b6e647731666e3cddcdefaa02dff 310 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 2 308 6.3E-124 T 22-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 SCD_RS05150 bda5b6e647731666e3cddcdefaa02dff 310 PANTHER PTHR10584:SF159 1 304 1.5E-122 T 22-04-2016 SCD_RS05150 bda5b6e647731666e3cddcdefaa02dff 310 SUPERFAMILY SSF53613 8 305 2.34E-58 T 22-04-2016 IPR029056 Ribokinase-like SCD_RS05150 bda5b6e647731666e3cddcdefaa02dff 310 PANTHER PTHR10584 1 304 1.5E-122 T 22-04-2016 SCD_RS05150 bda5b6e647731666e3cddcdefaa02dff 310 Pfam PF00294 pfkB family carbohydrate kinase 9 297 6.7E-46 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB SCD_RS06395 19a601d40f729ac7762cfadbdcbc1321 169 PANTHER PTHR14015 12 140 2.1E-32 T 22-04-2016 SCD_RS06395 19a601d40f729ac7762cfadbdcbc1321 169 Pfam PF04664 Opioid growth factor receptor (OGFr) conserved region 26 135 3.9E-27 T 22-04-2016 IPR006757 Opioid growth factor receptor (OGFr) conserved domain GO:0004872|GO:0016020 SCD_RS10665 b9825eb840f8104079846b8ccedac841 319 Pfam PF03773 Predicted permease 22 313 1.6E-65 T 22-04-2016 IPR005524 Predicted permease DUF318 SCD_RS10665 b9825eb840f8104079846b8ccedac841 319 PANTHER PTHR34184 1 315 5.7E-144 T 22-04-2016 SCD_RS10665 b9825eb840f8104079846b8ccedac841 319 PANTHER PTHR34184:SF2 1 315 5.7E-144 T 22-04-2016 SCD_RS14970 b056c78e806a8e29b2e58ae22b20143c 156 Gene3D G3DSA:1.20.5.620 65 122 5.5E-19 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain SCD_RS14970 b056c78e806a8e29b2e58ae22b20143c 156 SUPERFAMILY SSF81573 64 121 1.7E-12 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain SCD_RS14970 b056c78e806a8e29b2e58ae22b20143c 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 154 2.6E-47 T 22-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 SCD_RS14970 b056c78e806a8e29b2e58ae22b20143c 156 PANTHER PTHR33445 1 149 3.0E-40 T 22-04-2016 SCD_RS14970 b056c78e806a8e29b2e58ae22b20143c 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 12.112 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SCD_RS14970 b056c78e806a8e29b2e58ae22b20143c 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 4.1E-34 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SCD_RS13360 6e5cc33e588099df13f33abafff154ce 251 PANTHER PTHR10953 1 247 1.4E-96 T 22-04-2016 SCD_RS13360 6e5cc33e588099df13f33abafff154ce 251 SUPERFAMILY SSF69572 2 247 3.14E-84 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SCD_RS13360 6e5cc33e588099df13f33abafff154ce 251 Gene3D G3DSA:3.40.50.720 3 247 1.4E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS13360 6e5cc33e588099df13f33abafff154ce 251 Pfam PF00899 ThiF family 9 243 1.4E-63 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SCD_RS13360 6e5cc33e588099df13f33abafff154ce 251 PANTHER PTHR10953:SF158 1 247 1.4E-96 T 22-04-2016 SCD_RS05350 d13b5dbf4ae930c875e8f681247f8fcd 362 Pfam PF14072 DNA-sulfur modification-associated 10 347 6.7E-122 T 22-04-2016 IPR017642 DNA sulphur modification protein DndB SCD_RS05350 d13b5dbf4ae930c875e8f681247f8fcd 362 TIGRFAM TIGR03187 DGQHR: DGQHR domain 12 290 1.6E-84 T 22-04-2016 IPR017601 DGQHR-containing domain SCD_RS05350 d13b5dbf4ae930c875e8f681247f8fcd 362 TIGRFAM TIGR03233 DNA_S_dndB: DNA sulfur modification protein DndB 6 358 2.4E-157 T 22-04-2016 IPR017642 DNA sulphur modification protein DndB SCD_RS04435 6421db68f153e62157de2541cc20c4cc 372 SUPERFAMILY SSF51569 15 362 2.75E-74 T 22-04-2016 SCD_RS04435 6421db68f153e62157de2541cc20c4cc 372 Pfam PF00793 DAHP synthetase I family 94 357 4.1E-42 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SCD_RS04435 6421db68f153e62157de2541cc20c4cc 372 PANTHER PTHR21057:SF1 2 370 9.2E-74 T 22-04-2016 SCD_RS04435 6421db68f153e62157de2541cc20c4cc 372 PANTHER PTHR21057 2 370 9.2E-74 T 22-04-2016 SCD_RS04435 6421db68f153e62157de2541cc20c4cc 372 Gene3D G3DSA:3.20.20.70 87 360 9.6E-64 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS04435 6421db68f153e62157de2541cc20c4cc 372 Gene3D G3DSA:3.30.70.1140 1 77 8.6E-16 T 22-04-2016 SCD_RS12375 9c9170dbd2b1187d427ae86fc2e0681e 219 SMART SM00749 79 143 0.26 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria SCD_RS12375 9c9170dbd2b1187d427ae86fc2e0681e 219 SMART SM00749 157 219 4.1E-7 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria SCD_RS12375 9c9170dbd2b1187d427ae86fc2e0681e 219 Pfam PF04972 BON domain 79 142 7.4E-11 T 22-04-2016 IPR007055 BON domain SCD_RS12375 9c9170dbd2b1187d427ae86fc2e0681e 219 Pfam PF04972 BON domain 152 217 1.4E-12 T 22-04-2016 IPR007055 BON domain SCD_RS12375 9c9170dbd2b1187d427ae86fc2e0681e 219 PANTHER PTHR34606:SF4 36 219 5.1E-48 T 22-04-2016 SCD_RS12375 9c9170dbd2b1187d427ae86fc2e0681e 219 PANTHER PTHR34606 36 219 5.1E-48 T 22-04-2016 SCD_RS01375 54936af9e6d1e7576a9ccc5643191490 131 PANTHER PTHR30353 4 131 1.2E-31 T 22-04-2016 IPR032818 DedA family SCD_RS01375 54936af9e6d1e7576a9ccc5643191490 131 PANTHER PTHR30353:SF12 4 131 1.2E-31 T 22-04-2016 SCD_RS10130 83eda48698f3238f6aad8801fd9b256f 169 Gene3D G3DSA:3.20.80.10 39 163 7.8E-11 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain SCD_RS10130 83eda48698f3238f6aad8801fd9b256f 169 Pfam PF06445 GyrI-like small molecule binding domain 39 161 2.5E-8 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain SCD_RS10130 83eda48698f3238f6aad8801fd9b256f 169 SUPERFAMILY SSF55136 38 164 5.75E-7 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain SCD_RS01850 d47662a89d4f04f12f691334fa6b4536 147 PANTHER PTHR30154:SF21 1 144 3.4E-37 T 22-04-2016 SCD_RS01850 d47662a89d4f04f12f691334fa6b4536 147 Gene3D G3DSA:1.10.10.10 1 53 3.7E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS01850 d47662a89d4f04f12f691334fa6b4536 147 PANTHER PTHR30154 1 144 3.4E-37 T 22-04-2016 SCD_RS10275 2aee79abcc946f0349c8c1acce2019e9 684 PANTHER PTHR32552 26 663 2.4E-32 T 22-04-2016 SCD_RS10275 2aee79abcc946f0349c8c1acce2019e9 684 Pfam PF00593 TonB dependent receptor 438 682 1.2E-18 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SCD_RS10275 2aee79abcc946f0349c8c1acce2019e9 684 SUPERFAMILY SSF56935 35 682 5.13E-79 T 22-04-2016 SCD_RS10275 2aee79abcc946f0349c8c1acce2019e9 684 Gene3D G3DSA:2.40.170.20 171 682 1.7E-47 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SCD_RS10275 2aee79abcc946f0349c8c1acce2019e9 684 Gene3D G3DSA:2.170.130.10 42 170 6.6E-28 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SCD_RS10275 2aee79abcc946f0349c8c1acce2019e9 684 PANTHER PTHR32552:SF31 26 663 2.4E-32 T 22-04-2016 SCD_RS10275 2aee79abcc946f0349c8c1acce2019e9 684 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 168 8.2E-19 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SCD_RS08015 0a006f13486250e41d87cef2eefc74ce 286 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 282 5.4E-119 T 22-04-2016 IPR022522 Flagellar motor stator, MotA SCD_RS08015 0a006f13486250e41d87cef2eefc74ce 286 PANTHER PTHR30433 1 285 4.7E-156 T 22-04-2016 SCD_RS08015 0a006f13486250e41d87cef2eefc74ce 286 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 22-04-2016 IPR000540 Flagellar motor protein MotA, conserved site SCD_RS08015 0a006f13486250e41d87cef2eefc74ce 286 PANTHER PTHR30433:SF4 1 285 4.7E-156 T 22-04-2016 IPR022522 Flagellar motor stator, MotA SCD_RS08015 0a006f13486250e41d87cef2eefc74ce 286 Pfam PF01618 MotA/TolQ/ExbB proton channel family 140 236 1.9E-8 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SCD_RS07155 171894da66691f105ff7ce42d399c046 150 Pfam PF01322 Cytochrome C' 85 135 1.0E-6 T 22-04-2016 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 SCD_RS07155 171894da66691f105ff7ce42d399c046 150 Gene3D G3DSA:1.20.120.10 81 136 1.8E-7 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 SCD_RS07155 171894da66691f105ff7ce42d399c046 150 SUPERFAMILY SSF47175 33 137 1.3E-19 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 SCD_RS15860 f0f96dfe239255d78f496b0f38376fd6 243 Gene3D G3DSA:3.30.1150.10 154 229 4.0E-8 T 22-04-2016 SCD_RS15860 f0f96dfe239255d78f496b0f38376fd6 243 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 158 226 6.2E-14 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SCD_RS15860 f0f96dfe239255d78f496b0f38376fd6 243 SUPERFAMILY SSF74653 147 224 5.62E-16 T 22-04-2016 SCD_RS15860 f0f96dfe239255d78f496b0f38376fd6 243 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 158 227 1.6E-10 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SCD_RS08430 e4ccebc52ea5e3e47e32786b602c92f3 217 Pfam PF03963 Flagellar hook capping protein - N-terminal region 6 72 6.8E-25 T 22-04-2016 IPR005648 Flagellar hook capping protein SCD_RS08430 e4ccebc52ea5e3e47e32786b602c92f3 217 PANTHER PTHR30435 9 205 5.7E-42 T 22-04-2016 SCD_RS08430 e4ccebc52ea5e3e47e32786b602c92f3 217 PANTHER PTHR30435:SF15 9 205 5.7E-42 T 22-04-2016 SCD_RS08430 e4ccebc52ea5e3e47e32786b602c92f3 217 Pfam PF13861 FlgD Tudor-like domain 81 214 7.9E-14 T 22-04-2016 IPR025963 FlgD Tudor-like domain SCD_RS08430 e4ccebc52ea5e3e47e32786b602c92f3 217 Pfam PF13860 FlgD Ig-like domain 104 174 2.3E-19 T 22-04-2016 IPR025965 FlgD Ig-like domain SCD_RS15020 3feba863073e995bae418c0441dfe856 120 SUPERFAMILY SSF54211 6 113 7.08E-22 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SCD_RS15020 3feba863073e995bae418c0441dfe856 120 Pfam PF00825 Ribonuclease P 7 113 1.4E-23 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SCD_RS15020 3feba863073e995bae418c0441dfe856 120 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 7 116 14.398 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SCD_RS15020 3feba863073e995bae418c0441dfe856 120 PANTHER PTHR33992 3 117 3.5E-14 T 22-04-2016 SCD_RS15020 3feba863073e995bae418c0441dfe856 120 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 57 71 - T 22-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 SCD_RS15020 3feba863073e995bae418c0441dfe856 120 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 8 114 2.2E-19 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SCD_RS15020 3feba863073e995bae418c0441dfe856 120 Gene3D G3DSA:3.30.230.10 5 115 7.6E-25 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SCD_RS15020 3feba863073e995bae418c0441dfe856 120 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 15 90 7.0E-13 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SCD_RS04280 e34a4a791b7c36f6f6829be51a50b268 367 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SCD_RS04280 e34a4a791b7c36f6f6829be51a50b268 367 SUPERFAMILY SSF103263 4 352 2.09E-146 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SCD_RS04280 e34a4a791b7c36f6f6829be51a50b268 367 PANTHER PTHR21085 2 351 4.3E-207 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SCD_RS04280 e34a4a791b7c36f6f6829be51a50b268 367 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 36.992 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SCD_RS04280 e34a4a791b7c36f6f6829be51a50b268 367 Gene3D G3DSA:3.60.150.10 10 352 3.0E-155 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SCD_RS04280 e34a4a791b7c36f6f6829be51a50b268 367 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SCD_RS04280 e34a4a791b7c36f6f6829be51a50b268 367 PIRSF PIRSF001456 3 364 4.4E-138 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SCD_RS04280 e34a4a791b7c36f6f6829be51a50b268 367 TIGRFAM TIGR00033 aroC: chorismate synthase 11 350 8.7E-142 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SCD_RS04280 e34a4a791b7c36f6f6829be51a50b268 367 Pfam PF01264 Chorismate synthase 10 345 5.4E-137 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SCD_RS04280 e34a4a791b7c36f6f6829be51a50b268 367 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SCD_RS13745 0ffaf3b6f3875088cad34b28b5bd7ddb 481 PANTHER PTHR11773 1 479 1.1E-248 T 22-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 SCD_RS13745 0ffaf3b6f3875088cad34b28b5bd7ddb 481 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 1 481 57.562 T 22-04-2016 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 SCD_RS13745 0ffaf3b6f3875088cad34b28b5bd7ddb 481 SUPERFAMILY SSF53383 3 479 2.99E-112 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SCD_RS13745 0ffaf3b6f3875088cad34b28b5bd7ddb 481 Gene3D G3DSA:3.40.640.10 64 292 2.0E-32 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SCD_RS13745 0ffaf3b6f3875088cad34b28b5bd7ddb 481 Pfam PF00266 Aminotransferase class-V 158 271 4.9E-8 T 22-04-2016 IPR000192 Aminotransferase class V domain SCD_RS08220 557ec741b4d3b7f943817cd78b95df4d 177 Gene3D G3DSA:3.90.45.10 5 168 7.5E-51 T 22-04-2016 IPR023635 Peptide deformylase SCD_RS08220 557ec741b4d3b7f943817cd78b95df4d 177 Pfam PF01327 Polypeptide deformylase 4 159 1.3E-43 T 22-04-2016 IPR023635 Peptide deformylase SCD_RS08220 557ec741b4d3b7f943817cd78b95df4d 177 SUPERFAMILY SSF56420 1 168 6.8E-55 T 22-04-2016 IPR023635 Peptide deformylase SCD_RS08220 557ec741b4d3b7f943817cd78b95df4d 177 PANTHER PTHR10458:SF4 1 167 9.6E-69 T 22-04-2016 SCD_RS08220 557ec741b4d3b7f943817cd78b95df4d 177 PRINTS PR01576 Peptide deformylase signature 98 109 1.545586E-27 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SCD_RS08220 557ec741b4d3b7f943817cd78b95df4d 177 PRINTS PR01576 Peptide deformylase signature 129 158 1.545586E-27 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SCD_RS08220 557ec741b4d3b7f943817cd78b95df4d 177 PRINTS PR01576 Peptide deformylase signature 34 63 1.545586E-27 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SCD_RS08220 557ec741b4d3b7f943817cd78b95df4d 177 PRINTS PR01576 Peptide deformylase signature 110 128 1.545586E-27 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SCD_RS08220 557ec741b4d3b7f943817cd78b95df4d 177 PANTHER PTHR10458 1 167 9.6E-69 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SCD_RS08220 557ec741b4d3b7f943817cd78b95df4d 177 Hamap MF_00163 Peptide deformylase [def]. 2 171 26.072 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SCD_RS08220 557ec741b4d3b7f943817cd78b95df4d 177 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 163 6.4E-34 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SCD_RS08220 557ec741b4d3b7f943817cd78b95df4d 177 PIRSF PIRSF004749 1 176 1.5E-46 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SCD_RS05720 b1f0338e8d30821292d2139bf7b14362 148 Gene3D G3DSA:1.10.760.10 44 133 2.5E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS05720 b1f0338e8d30821292d2139bf7b14362 148 SUPERFAMILY SSF46626 20 104 9.45E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS12610 2127f2585b64a14e7afb248d5a4a6e41 332 Pfam PF13557 Putative MetA-pathway of phenol degradation 98 305 1.7E-5 T 22-04-2016 IPR025737 MetA-pathway of phenol degradation, putative SCD_RS12610 2127f2585b64a14e7afb248d5a4a6e41 332 Gene3D G3DSA:2.40.170.20 216 301 2.4E-5 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SCD_RS12610 2127f2585b64a14e7afb248d5a4a6e41 332 Gene3D G3DSA:2.40.170.20 31 142 2.4E-5 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SCD_RS12610 2127f2585b64a14e7afb248d5a4a6e41 332 Gene3D G3DSA:2.40.170.20 181 182 2.4E-5 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SCD_RS12610 2127f2585b64a14e7afb248d5a4a6e41 332 SUPERFAMILY SSF56935 33 332 4.68E-6 T 22-04-2016 SCD_RS02955 c55fe61769e6cdbef09e0946f64915c9 73 Pfam PF02416 mttA/Hcf106 family 5 49 2.3E-16 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 SCD_RS02955 c55fe61769e6cdbef09e0946f64915c9 73 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 64 23.457 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 SCD_RS02955 c55fe61769e6cdbef09e0946f64915c9 73 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 8.4E-24 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 SCD_RS02955 c55fe61769e6cdbef09e0946f64915c9 73 PANTHER PTHR33162 1 48 5.1E-17 T 22-04-2016 SCD_RS01575 da0710a2329367a41288f38d842be34d 336 SUPERFAMILY SSF52091 241 330 2.16E-8 T 22-04-2016 IPR002645 STAS domain SCD_RS01575 da0710a2329367a41288f38d842be34d 336 Gene3D G3DSA:3.30.750.24 247 330 9.9E-7 T 22-04-2016 IPR002645 STAS domain SCD_RS12050 a62f4f1b54e7818951f08576b0f66e6e 538 PANTHER PTHR30462 5 476 1.5E-104 T 22-04-2016 SCD_RS12050 a62f4f1b54e7818951f08576b0f66e6e 538 PANTHER PTHR30462:SF2 5 476 1.5E-104 T 22-04-2016 SCD_RS12050 a62f4f1b54e7818951f08576b0f66e6e 538 Pfam PF02470 MlaD protein 157 217 1.1E-8 T 22-04-2016 IPR003399 Mce/MlaD SCD_RS12050 a62f4f1b54e7818951f08576b0f66e6e 538 Pfam PF02470 MlaD protein 42 132 1.3E-12 T 22-04-2016 IPR003399 Mce/MlaD SCD_RS12050 a62f4f1b54e7818951f08576b0f66e6e 538 Pfam PF02470 MlaD protein 286 385 1.0E-16 T 22-04-2016 IPR003399 Mce/MlaD SCD_RS09190 5bc9f1a02bde801caf20478b9795f647 129 PIRSF PIRSF021774 1 129 8.5E-45 T 22-04-2016 IPR016796 Uncharacterised conserved protein UCP021774 SCD_RS09190 5bc9f1a02bde801caf20478b9795f647 129 PANTHER PTHR38342 1 127 1.7E-37 T 22-04-2016 SCD_RS09190 5bc9f1a02bde801caf20478b9795f647 129 Pfam PF03625 Domain of unknown function DUF302 34 97 5.4E-29 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SCD_RS09190 5bc9f1a02bde801caf20478b9795f647 129 Gene3D G3DSA:3.30.310.70 1 126 1.3E-47 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SCD_RS09190 5bc9f1a02bde801caf20478b9795f647 129 SUPERFAMILY SSF103247 1 126 2.09E-37 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SCD_RS00410 f89644ea324136ecae7d640477da0e28 130 SUPERFAMILY SSF53062 1 127 1.24E-34 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SCD_RS00410 f89644ea324136ecae7d640477da0e28 130 Pfam PF03610 PTS system fructose IIA component 3 106 1.4E-19 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SCD_RS00410 f89644ea324136ecae7d640477da0e28 130 Gene3D G3DSA:3.40.50.510 1 129 1.1E-39 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SCD_RS00410 f89644ea324136ecae7d640477da0e28 130 PANTHER PTHR33799 2 129 6.0E-30 T 22-04-2016 SCD_RS02415 38522135a1e7923c42f7fefbea636553 114 PANTHER PTHR41335 1 111 1.5E-15 T 22-04-2016 SCD_RS02415 38522135a1e7923c42f7fefbea636553 114 Pfam PF06305 Protein of unknown function (DUF1049) 21 81 6.4E-19 T 22-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 SCD_RS06710 2da9770b53f2af5a5dff00790e33ef1c 472 Pfam PF01050 Mannose-6-phosphate isomerase 317 467 6.0E-68 T 22-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 SCD_RS06710 2da9770b53f2af5a5dff00790e33ef1c 472 PANTHER PTHR12526 354 471 2.8E-131 T 22-04-2016 SCD_RS06710 2da9770b53f2af5a5dff00790e33ef1c 472 PANTHER PTHR12526 158 291 2.8E-131 T 22-04-2016 SCD_RS06710 2da9770b53f2af5a5dff00790e33ef1c 472 Pfam PF00483 Nucleotidyl transferase 4 282 6.2E-57 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SCD_RS06710 2da9770b53f2af5a5dff00790e33ef1c 472 Gene3D G3DSA:2.60.120.10 359 471 1.7E-42 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SCD_RS06710 2da9770b53f2af5a5dff00790e33ef1c 472 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 471 1.7E-173 T 22-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 SCD_RS06710 2da9770b53f2af5a5dff00790e33ef1c 472 PANTHER PTHR12526:SF357 354 471 2.8E-131 T 22-04-2016 SCD_RS06710 2da9770b53f2af5a5dff00790e33ef1c 472 PANTHER PTHR12526:SF357 158 291 2.8E-131 T 22-04-2016 SCD_RS06710 2da9770b53f2af5a5dff00790e33ef1c 472 SUPERFAMILY SSF51182 183 471 7.79E-79 T 22-04-2016 IPR011051 RmlC-like cupin domain SCD_RS06710 2da9770b53f2af5a5dff00790e33ef1c 472 SUPERFAMILY SSF53448 2 281 5.88E-65 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS06710 2da9770b53f2af5a5dff00790e33ef1c 472 Gene3D G3DSA:3.90.550.10 2 273 1.4E-87 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS12200 cf88b3614a25cd58ea4f0312bf8b8167 202 Pfam PF01121 Dephospho-CoA kinase 2 180 1.4E-57 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SCD_RS12200 cf88b3614a25cd58ea4f0312bf8b8167 202 SUPERFAMILY SSF52540 1 194 3.75E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12200 cf88b3614a25cd58ea4f0312bf8b8167 202 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 187 1.5E-48 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SCD_RS12200 cf88b3614a25cd58ea4f0312bf8b8167 202 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 192 26.822 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SCD_RS12200 cf88b3614a25cd58ea4f0312bf8b8167 202 PANTHER PTHR10695 1 194 9.0E-68 T 22-04-2016 SCD_RS12200 cf88b3614a25cd58ea4f0312bf8b8167 202 Gene3D G3DSA:3.40.50.300 1 195 9.2E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07395 706da4aa44d22a39e8528a78ab41b9d9 398 Pfam PF00390 Malic enzyme, N-terminal domain 19 149 4.1E-27 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SCD_RS07395 706da4aa44d22a39e8528a78ab41b9d9 398 Gene3D G3DSA:3.40.50.10380 5 159 4.4E-49 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SCD_RS07395 706da4aa44d22a39e8528a78ab41b9d9 398 SMART SM01274 17 150 2.8E-79 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SCD_RS07395 706da4aa44d22a39e8528a78ab41b9d9 398 SUPERFAMILY SSF51735 162 397 8.55E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS07395 706da4aa44d22a39e8528a78ab41b9d9 398 SUPERFAMILY SSF53223 9 160 3.02E-53 T 22-04-2016 SCD_RS07395 706da4aa44d22a39e8528a78ab41b9d9 398 Pfam PF03949 Malic enzyme, NAD binding domain 164 356 4.6E-26 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 SCD_RS07395 706da4aa44d22a39e8528a78ab41b9d9 398 Gene3D G3DSA:3.40.50.720 160 397 9.8E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS07395 706da4aa44d22a39e8528a78ab41b9d9 398 PANTHER PTHR23406 32 397 8.4E-158 T 22-04-2016 SCD_RS07395 706da4aa44d22a39e8528a78ab41b9d9 398 SMART SM00919 162 398 9.7E-140 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 SCD_RS12865 8b7de73dabf392f748b706d6f03439a6 164 PANTHER PTHR33452:SF7 12 158 4.4E-46 T 22-04-2016 SCD_RS12865 8b7de73dabf392f748b706d6f03439a6 164 PANTHER PTHR33452 12 158 4.4E-46 T 22-04-2016 SCD_RS12865 8b7de73dabf392f748b706d6f03439a6 164 Pfam PF07681 DoxX 20 106 1.8E-19 T 22-04-2016 IPR032808 DoxX family SCD_RS02960 901251476280fd61e3731e304e8160d6 147 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 68 1.3E-18 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 SCD_RS02960 901251476280fd61e3731e304e8160d6 147 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 130 14.941 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 SCD_RS02960 901251476280fd61e3731e304e8160d6 147 Pfam PF02416 mttA/Hcf106 family 5 34 4.8E-7 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 SCD_RS02960 901251476280fd61e3731e304e8160d6 147 PANTHER PTHR33162:SF4 1 146 1.2E-13 T 22-04-2016 SCD_RS02960 901251476280fd61e3731e304e8160d6 147 PANTHER PTHR33162 1 146 1.2E-13 T 22-04-2016 SCD_RS02960 901251476280fd61e3731e304e8160d6 147 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.4E-14 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 SCD_RS02960 901251476280fd61e3731e304e8160d6 147 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.4E-14 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 SCD_RS02960 901251476280fd61e3731e304e8160d6 147 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.4E-14 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 SCD_RS07625 440e3bb54ef25ee71bb320e72305f84a 620 PANTHER PTHR18866 530 618 1.1E-224 T 22-04-2016 SCD_RS07625 440e3bb54ef25ee71bb320e72305f84a 620 PANTHER PTHR18866 1 508 1.1E-224 T 22-04-2016 SCD_RS07625 440e3bb54ef25ee71bb320e72305f84a 620 PANTHER PTHR18866:SF109 530 618 1.1E-224 T 22-04-2016 SCD_RS07625 440e3bb54ef25ee71bb320e72305f84a 620 PANTHER PTHR18866:SF109 1 508 1.1E-224 T 22-04-2016 SCD_RS07625 440e3bb54ef25ee71bb320e72305f84a 620 SUPERFAMILY SSF51230 544 617 2.49E-21 T 22-04-2016 IPR011053 Single hybrid motif SCD_RS07625 440e3bb54ef25ee71bb320e72305f84a 620 SUPERFAMILY SSF89000 296 446 2.12E-50 T 22-04-2016 SCD_RS07625 440e3bb54ef25ee71bb320e72305f84a 620 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 574 591 - T 22-04-2016 IPR001882 Biotin-binding site SCD_RS07625 440e3bb54ef25ee71bb320e72305f84a 620 Gene3D G3DSA:3.20.20.70 2 282 1.2E-113 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS07625 440e3bb54ef25ee71bb320e72305f84a 620 Pfam PF00364 Biotin-requiring enzyme 552 617 1.1E-16 T 22-04-2016 IPR000089 Biotin/lipoyl attachment SCD_RS07625 440e3bb54ef25ee71bb320e72305f84a 620 SUPERFAMILY SSF51569 2 300 8.42E-91 T 22-04-2016 SCD_RS07625 440e3bb54ef25ee71bb320e72305f84a 620 Pfam PF00682 HMGL-like 4 268 1.7E-47 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 SCD_RS07625 440e3bb54ef25ee71bb320e72305f84a 620 Gene3D G3DSA:2.40.50.100 545 618 1.9E-24 T 22-04-2016 SCD_RS07625 440e3bb54ef25ee71bb320e72305f84a 620 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 6 614 1.6E-243 T 22-04-2016 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 SCD_RS07625 440e3bb54ef25ee71bb320e72305f84a 620 Pfam PF02436 Conserved carboxylase domain 291 480 4.6E-56 T 22-04-2016 IPR003379 Carboxylase, conserved domain SCD_RS08195 e4d780f331ff724e226eecfaad30d4bd 186 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 9 175 5.0E-58 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SCD_RS08195 e4d780f331ff724e226eecfaad30d4bd 186 PANTHER PTHR21047 1 175 1.5E-53 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SCD_RS08195 e4d780f331ff724e226eecfaad30d4bd 186 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 3 172 3.0E-59 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SCD_RS08195 e4d780f331ff724e226eecfaad30d4bd 186 Gene3D G3DSA:2.60.120.10 5 176 3.4E-67 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SCD_RS08195 e4d780f331ff724e226eecfaad30d4bd 186 SUPERFAMILY SSF51182 5 177 2.48E-61 T 22-04-2016 IPR011051 RmlC-like cupin domain SCD_RS08195 e4d780f331ff724e226eecfaad30d4bd 186 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 6 175 7.5E-49 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SCD_RS08195 e4d780f331ff724e226eecfaad30d4bd 186 PANTHER PTHR21047:SF2 1 175 1.5E-53 T 22-04-2016 SCD_RS06660 457795822307b3a58cac0f61350eccb8 241 SUPERFAMILY SSF53335 6 196 1.0E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS06660 457795822307b3a58cac0f61350eccb8 241 Gene3D G3DSA:3.40.50.150 10 143 1.0E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS06660 457795822307b3a58cac0f61350eccb8 241 PANTHER PTHR10108 22 151 2.9E-16 T 22-04-2016 SCD_RS06660 457795822307b3a58cac0f61350eccb8 241 Pfam PF08241 Methyltransferase domain 55 143 2.4E-13 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SCD_RS04920 785f46f3fbf33cc6cc6e64a8f28c4cfc 123 SMART SM00507 28 83 2.5E-6 T 22-04-2016 IPR003615 HNH nuclease SCD_RS04920 785f46f3fbf33cc6cc6e64a8f28c4cfc 123 Pfam PF01844 HNH endonuclease 40 88 4.6E-13 T 22-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 SCD_RS07195 ee804a49699b0a12e33265275c15ab16 133 PANTHER PTHR30558 10 129 2.6E-15 T 22-04-2016 SCD_RS07195 ee804a49699b0a12e33265275c15ab16 133 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 132 9.6E-23 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SCD_RS07195 ee804a49699b0a12e33265275c15ab16 133 PANTHER PTHR30558:SF10 10 129 2.6E-15 T 22-04-2016 SCD_RS02120 117b5ad8e9f73bc565217007bf52b21a 538 Pfam PF03099 Biotin/lipoate A/B protein ligase family 58 164 6.8E-5 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 SCD_RS02120 117b5ad8e9f73bc565217007bf52b21a 538 SUPERFAMILY SSF55681 12 224 9.94E-43 T 22-04-2016 SCD_RS02120 117b5ad8e9f73bc565217007bf52b21a 538 PANTHER PTHR12561 29 358 5.9E-41 T 22-04-2016 SCD_RS02120 117b5ad8e9f73bc565217007bf52b21a 538 Pfam PF01976 Protein of unknown function DUF116 377 484 2.1E-9 T 22-04-2016 IPR002829 Protein of unknown function DUF116 SCD_RS02120 117b5ad8e9f73bc565217007bf52b21a 538 Gene3D G3DSA:3.90.1550.10 28 222 1.4E-37 T 22-04-2016 SCD_RS02120 117b5ad8e9f73bc565217007bf52b21a 538 PANTHER PTHR12561:SF11 29 358 5.9E-41 T 22-04-2016 SCD_RS10990 056db896886e5f04a64843468d1e230d 340 SUPERFAMILY SSF56281 43 313 4.76E-47 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS10990 056db896886e5f04a64843468d1e230d 340 Pfam PF00753 Metallo-beta-lactamase superfamily 70 264 1.6E-16 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS10990 056db896886e5f04a64843468d1e230d 340 PANTHER PTHR11935 16 287 1.4E-23 T 22-04-2016 SCD_RS10990 056db896886e5f04a64843468d1e230d 340 Gene3D G3DSA:3.60.15.10 43 290 1.6E-39 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS10990 056db896886e5f04a64843468d1e230d 340 SMART SM00849 72 264 8.4E-17 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS10990 056db896886e5f04a64843468d1e230d 340 PANTHER PTHR11935:SF5 16 287 1.4E-23 T 22-04-2016 SCD_RS07330 837d4471373c01ca7ecc19f40a4aaaf9 263 Hamap MF_01805 Segregation and condensation protein A [scpA]. 31 260 21.016 T 22-04-2016 IPR003768 Segregation and condensation protein A SCD_RS07330 837d4471373c01ca7ecc19f40a4aaaf9 263 Pfam PF02616 Segregation and condensation protein ScpA 48 258 1.9E-27 T 22-04-2016 IPR003768 Segregation and condensation protein A SCD_RS07330 837d4471373c01ca7ecc19f40a4aaaf9 263 PANTHER PTHR33969:SF2 15 258 3.5E-76 T 22-04-2016 SCD_RS07330 837d4471373c01ca7ecc19f40a4aaaf9 263 PANTHER PTHR33969 15 258 3.5E-76 T 22-04-2016 SCD_RS10085 162fba51473a243075119c7865d03526 935 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 416 436 1.1E-61 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SCD_RS10085 162fba51473a243075119c7865d03526 935 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 759 785 1.1E-61 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SCD_RS10085 162fba51473a243075119c7865d03526 935 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 581 601 1.1E-61 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SCD_RS10085 162fba51473a243075119c7865d03526 935 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 257 272 1.1E-61 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SCD_RS10085 162fba51473a243075119c7865d03526 935 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 193 209 1.1E-61 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SCD_RS10085 162fba51473a243075119c7865d03526 935 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 140 153 1.1E-61 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SCD_RS10085 162fba51473a243075119c7865d03526 935 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 623 652 1.1E-61 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SCD_RS10085 162fba51473a243075119c7865d03526 935 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 141 152 - T 22-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SCD_RS10085 162fba51473a243075119c7865d03526 935 Gene3D G3DSA:1.20.1440.90 287 419 5.4E-26 T 22-04-2016 SCD_RS10085 162fba51473a243075119c7865d03526 935 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 3 935 16.973 T 22-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SCD_RS10085 162fba51473a243075119c7865d03526 935 SUPERFAMILY SSF51621 12 935 6.59E-282 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SCD_RS10085 162fba51473a243075119c7865d03526 935 PANTHER PTHR30523 6 935 0.0 T 22-04-2016 SCD_RS10085 162fba51473a243075119c7865d03526 935 Pfam PF00311 Phosphoenolpyruvate carboxylase 139 935 1.3E-271 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SCD_RS10085 162fba51473a243075119c7865d03526 935 PANTHER PTHR30523:SF0 6 935 0.0 T 22-04-2016 SCD_RS10085 162fba51473a243075119c7865d03526 935 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 583 595 - T 22-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SCD_RS10945 f9226b581b42964796b322a1b52d7588 342 Pfam PF02547 Queuosine biosynthesis protein 3 338 3.2E-132 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SCD_RS10945 f9226b581b42964796b322a1b52d7588 342 PANTHER PTHR30307:SF0 2 342 4.4E-166 T 22-04-2016 SCD_RS10945 f9226b581b42964796b322a1b52d7588 342 Gene3D G3DSA:3.40.1780.10 1 62 4.4E-102 T 22-04-2016 SCD_RS10945 f9226b581b42964796b322a1b52d7588 342 Gene3D G3DSA:3.40.1780.10 177 338 4.4E-102 T 22-04-2016 SCD_RS10945 f9226b581b42964796b322a1b52d7588 342 Gene3D G3DSA:2.40.10.240 64 141 1.2E-10 T 22-04-2016 SCD_RS10945 f9226b581b42964796b322a1b52d7588 342 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 339 46.773 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SCD_RS10945 f9226b581b42964796b322a1b52d7588 342 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 338 5.2E-135 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SCD_RS10945 f9226b581b42964796b322a1b52d7588 342 SUPERFAMILY SSF111337 1 338 4.05E-134 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SCD_RS10945 f9226b581b42964796b322a1b52d7588 342 PANTHER PTHR30307 2 342 4.4E-166 T 22-04-2016 SCD_RS13635 14887c04924c13e7c9487a66231ee298 239 Pfam PF00106 short chain dehydrogenase 2 194 3.4E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS13635 14887c04924c13e7c9487a66231ee298 239 SUPERFAMILY SSF51735 2 238 6.67E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS13635 14887c04924c13e7c9487a66231ee298 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 8.0E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS13635 14887c04924c13e7c9487a66231ee298 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 8.0E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS13635 14887c04924c13e7c9487a66231ee298 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 8.0E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS13635 14887c04924c13e7c9487a66231ee298 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 8.0E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS13635 14887c04924c13e7c9487a66231ee298 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 8.0E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS13635 14887c04924c13e7c9487a66231ee298 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 8.0E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS13635 14887c04924c13e7c9487a66231ee298 239 PANTHER PTHR24322:SF328 150 181 4.4E-50 T 22-04-2016 SCD_RS13635 14887c04924c13e7c9487a66231ee298 239 PANTHER PTHR24322:SF328 6 134 4.4E-50 T 22-04-2016 SCD_RS13635 14887c04924c13e7c9487a66231ee298 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 7.9E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS13635 14887c04924c13e7c9487a66231ee298 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 7.9E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS13635 14887c04924c13e7c9487a66231ee298 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 7.9E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS13635 14887c04924c13e7c9487a66231ee298 239 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 186 7.9E-7 T 22-04-2016 SCD_RS13635 14887c04924c13e7c9487a66231ee298 239 Gene3D G3DSA:3.40.50.720 2 239 1.8E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS13635 14887c04924c13e7c9487a66231ee298 239 PANTHER PTHR24322 150 181 4.4E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS13635 14887c04924c13e7c9487a66231ee298 239 PANTHER PTHR24322 6 134 4.4E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SCD_RS11945 241a8037e720129c6d02144acb5499b2 379 PANTHER PTHR31384 50 309 1.6E-59 T 22-04-2016 SCD_RS11945 241a8037e720129c6d02144acb5499b2 379 Gene3D G3DSA:3.40.630.30 177 324 3.4E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS11945 241a8037e720129c6d02144acb5499b2 379 SUPERFAMILY SSF55729 177 346 6.25E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS11945 241a8037e720129c6d02144acb5499b2 379 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 13 375 1.5E-155 T 22-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition SCD_RS13665 df701ad16cce138d8c4441b1b3c11c52 793 SUPERFAMILY SSF82866 656 783 3.01E-14 T 22-04-2016 SCD_RS13665 df701ad16cce138d8c4441b1b3c11c52 793 Pfam PF03176 MMPL family 186 401 6.1E-11 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 SCD_RS13665 df701ad16cce138d8c4441b1b3c11c52 793 Gene3D G3DSA:1.20.1640.10 213 401 2.0E-14 T 22-04-2016 SCD_RS13665 df701ad16cce138d8c4441b1b3c11c52 793 Gene3D G3DSA:1.20.1640.10 643 724 8.5E-4 T 22-04-2016 SCD_RS13665 df701ad16cce138d8c4441b1b3c11c52 793 SUPERFAMILY SSF82866 183 401 1.22E-19 T 22-04-2016 SCD_RS12930 98d86be96a35f512e39f997661648499 548 PANTHER PTHR13833:SF51 121 384 9.3E-45 T 22-04-2016 SCD_RS12930 98d86be96a35f512e39f997661648499 548 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 8 205 4.4E-17 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 SCD_RS12930 98d86be96a35f512e39f997661648499 548 Gene3D G3DSA:2.60.120.260 404 547 5.0E-34 T 22-04-2016 IPR008979 Galactose-binding domain-like SCD_RS12930 98d86be96a35f512e39f997661648499 548 PANTHER PTHR13833 121 384 9.3E-45 T 22-04-2016 SCD_RS12930 98d86be96a35f512e39f997661648499 548 Pfam PF08534 Redoxin 246 384 7.4E-13 T 22-04-2016 IPR013740 Redoxin GO:0016491 SCD_RS12930 98d86be96a35f512e39f997661648499 548 Gene3D G3DSA:3.40.30.10 245 385 2.3E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS12930 98d86be96a35f512e39f997661648499 548 SUPERFAMILY SSF52833 253 384 4.55E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS03465 38436379ee840ca65f407aba6320322b 230 TIGRFAM TIGR03306 altF1_A: alternate F1F0 ATPase, F0 subunit A 3 219 2.6E-113 T 22-04-2016 IPR017692 Alternate F1F0 ATPase, F0 subunit A SCD_RS03465 38436379ee840ca65f407aba6320322b 230 PANTHER PTHR11410 9 224 4.2E-49 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SCD_RS03465 38436379ee840ca65f407aba6320322b 230 SUPERFAMILY SSF81336 76 214 4.58E-33 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SCD_RS03465 38436379ee840ca65f407aba6320322b 230 Gene3D G3DSA:1.20.120.220 76 218 3.5E-35 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SCD_RS03465 38436379ee840ca65f407aba6320322b 230 Pfam PF00119 ATP synthase A chain 23 214 2.6E-41 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SCD_RS03465 38436379ee840ca65f407aba6320322b 230 PANTHER PTHR11410:SF7 9 224 4.2E-49 T 22-04-2016 SCD_RS03465 38436379ee840ca65f407aba6320322b 230 PRINTS PR00123 ATP synthase A subunit signature 201 216 1.6E-15 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SCD_RS03465 38436379ee840ca65f407aba6320322b 230 PRINTS PR00123 ATP synthase A subunit signature 81 97 1.6E-15 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SCD_RS03465 38436379ee840ca65f407aba6320322b 230 PRINTS PR00123 ATP synthase A subunit signature 141 156 1.6E-15 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SCD_RS03465 38436379ee840ca65f407aba6320322b 230 PRINTS PR00123 ATP synthase A subunit signature 157 179 1.6E-15 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SCD_RS03465 38436379ee840ca65f407aba6320322b 230 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 23 216 4.1E-31 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SCD_RS03465 38436379ee840ca65f407aba6320322b 230 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 221 13.408 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SCD_RS02880 05295f7b489352d15a8e9d830d5478f2 304 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS02880 05295f7b489352d15a8e9d830d5478f2 304 PANTHER PTHR24220 5 221 2.4E-97 T 22-04-2016 SCD_RS02880 05295f7b489352d15a8e9d830d5478f2 304 Gene3D G3DSA:3.40.50.300 2 224 9.0E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02880 05295f7b489352d15a8e9d830d5478f2 304 SMART SM00382 28 208 1.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS02880 05295f7b489352d15a8e9d830d5478f2 304 SUPERFAMILY SSF52540 3 230 3.48E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02880 05295f7b489352d15a8e9d830d5478f2 304 Pfam PF00005 ABC transporter 19 161 1.6E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS02880 05295f7b489352d15a8e9d830d5478f2 304 PANTHER PTHR24220:SF305 5 221 2.4E-97 T 22-04-2016 SCD_RS09890 909fb59e478a9eec3f9cdf0c16b9d0c2 242 PANTHER PTHR34368 6 233 2.1E-73 T 22-04-2016 SCD_RS09890 909fb59e478a9eec3f9cdf0c16b9d0c2 242 PANTHER PTHR34368:SF1 6 233 2.1E-73 T 22-04-2016 SCD_RS09890 909fb59e478a9eec3f9cdf0c16b9d0c2 242 Pfam PF05875 Ceramidase 29 136 1.3E-6 T 22-04-2016 IPR008901 Ceramidase GO:0006672|GO:0016021|GO:0016811 Reactome: REACT_22258 SCD_RS14840 5893f058724ee5c186f26e26e2805726 415 PANTHER PTHR11926:SF335 5 407 1.6E-100 T 22-04-2016 SCD_RS14840 5893f058724ee5c186f26e26e2805726 415 Gene3D G3DSA:3.40.50.2000 20 240 8.6E-11 T 22-04-2016 SCD_RS14840 5893f058724ee5c186f26e26e2805726 415 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 263 384 2.3E-7 T 22-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 SCD_RS14840 5893f058724ee5c186f26e26e2805726 415 PANTHER PTHR11926 5 407 1.6E-100 T 22-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 SCD_RS14840 5893f058724ee5c186f26e26e2805726 415 Gene3D G3DSA:3.40.50.2000 241 383 8.3E-19 T 22-04-2016 SCD_RS14840 5893f058724ee5c186f26e26e2805726 415 SUPERFAMILY SSF53756 12 403 1.91E-64 T 22-04-2016 SCD_RS04440 3351877e336c752699cd42d68a3fdeb5 243 Gene3D G3DSA:3.60.21.10 8 130 3.7E-16 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SCD_RS04440 3351877e336c752699cd42d68a3fdeb5 243 Gene3D G3DSA:3.60.21.10 178 215 3.7E-16 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SCD_RS04440 3351877e336c752699cd42d68a3fdeb5 243 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 243 104.918 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 SCD_RS04440 3351877e336c752699cd42d68a3fdeb5 243 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 7 237 1.2E-84 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 SCD_RS04440 3351877e336c752699cd42d68a3fdeb5 243 Pfam PF00149 Calcineurin-like phosphoesterase 8 204 1.0E-5 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SCD_RS04440 3351877e336c752699cd42d68a3fdeb5 243 PANTHER PTHR34990:SF1 4 237 1.7E-83 T 22-04-2016 SCD_RS04440 3351877e336c752699cd42d68a3fdeb5 243 SUPERFAMILY SSF56300 162 224 3.04E-23 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SCD_RS04440 3351877e336c752699cd42d68a3fdeb5 243 SUPERFAMILY SSF56300 8 135 3.04E-23 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SCD_RS04440 3351877e336c752699cd42d68a3fdeb5 243 PANTHER PTHR34990 4 237 1.7E-83 T 22-04-2016 SCD_RS02585 aadca3450cdf2134948d48017aa0059b 377 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 3 92 9.4E-13 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal SCD_RS02585 aadca3450cdf2134948d48017aa0059b 377 Gene3D G3DSA:3.40.225.10 2 109 1.1E-16 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal SCD_RS02585 aadca3450cdf2134948d48017aa0059b 377 SUPERFAMILY SSF53639 1 106 2.16E-15 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal SCD_RS14660 5ed06ea108419e5c600c522b0c266781 371 SUPERFAMILY SSF53756 7 357 1.91E-70 T 22-04-2016 SCD_RS14660 5ed06ea108419e5c600c522b0c266781 371 Pfam PF00534 Glycosyl transferases group 1 185 335 8.9E-32 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SCD_RS14660 5ed06ea108419e5c600c522b0c266781 371 PANTHER PTHR12526 1 358 1.7E-54 T 22-04-2016 SCD_RS14660 5ed06ea108419e5c600c522b0c266781 371 Pfam PF13439 Glycosyltransferase Family 4 19 169 5.8E-9 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SCD_RS14660 5ed06ea108419e5c600c522b0c266781 371 Gene3D G3DSA:3.40.50.2000 200 336 1.3E-24 T 22-04-2016 SCD_RS04545 b3ff5837524dd0c77d569a6ef4b80986 197 PANTHER PTHR11403:SF6 22 196 3.3E-39 T 22-04-2016 SCD_RS04545 b3ff5837524dd0c77d569a6ef4b80986 197 Gene3D G3DSA:1.20.120.80 20 196 7.9E-41 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 SCD_RS04545 b3ff5837524dd0c77d569a6ef4b80986 197 PANTHER PTHR11403 22 196 3.3E-39 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 SCD_RS04545 b3ff5837524dd0c77d569a6ef4b80986 197 SUPERFAMILY SSF81452 15 196 8.76E-46 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 SCD_RS04545 b3ff5837524dd0c77d569a6ef4b80986 197 Pfam PF00510 Cytochrome c oxidase subunit III 65 195 1.0E-8 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 SCD_RS09825 152df2036b3a5e12f3cd561514eee7ab 284 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 262 284 4.2E-6 T 22-04-2016 IPR013424 PEP-CTERM protein-sorting domain SCD_RS09825 152df2036b3a5e12f3cd561514eee7ab 284 Pfam PF07589 PEP-CTERM motif 262 283 1.5E-6 T 22-04-2016 IPR013424 PEP-CTERM protein-sorting domain SCD_RS02040 d2873d7a28a5c9f9fd6c61201b73aae7 380 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 90 308 1.4E-45 T 22-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA SCD_RS02040 d2873d7a28a5c9f9fd6c61201b73aae7 380 SUPERFAMILY SSF53335 22 372 7.18E-95 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS02040 d2873d7a28a5c9f9fd6c61201b73aae7 380 PANTHER PTHR12049 20 360 6.5E-60 T 22-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA SCD_RS13680 fce06a9d4c5e0854e69bfe65e81447ee 101 SUPERFAMILY SSF54637 5 94 4.15E-15 T 22-04-2016 IPR029069 HotDog domain SCD_RS13680 fce06a9d4c5e0854e69bfe65e81447ee 101 Gene3D G3DSA:3.10.129.10 5 95 1.2E-13 T 22-04-2016 IPR029069 HotDog domain SCD_RS13680 fce06a9d4c5e0854e69bfe65e81447ee 101 Pfam PF07977 FabA-like domain 5 40 5.9E-7 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SCD_RS05850 c215b939a12de7900c438bc24464e216 346 SUPERFAMILY SSF102114 98 298 7.85E-13 T 22-04-2016 SCD_RS05850 c215b939a12de7900c438bc24464e216 346 PANTHER PTHR30544 44 330 6.4E-96 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SCD_RS05850 c215b939a12de7900c438bc24464e216 346 PANTHER PTHR30544:SF5 44 330 6.4E-96 T 22-04-2016 SCD_RS05850 c215b939a12de7900c438bc24464e216 346 Pfam PF04055 Radical SAM superfamily 100 257 3.2E-11 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SCD_RS05850 c215b939a12de7900c438bc24464e216 346 Gene3D G3DSA:3.20.20.70 98 310 1.2E-11 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS07905 ba55025a156628af3b86902bc9a0c27a 131 SMART SM00910 33 131 2.9E-25 T 22-04-2016 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 SCD_RS07905 ba55025a156628af3b86902bc9a0c27a 131 Pfam PF08797 HIRAN domain 39 129 3.2E-17 T 22-04-2016 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 SCD_RS00020 3efc06fac6bf3c424b98503c92c1f670 392 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 15 388 6.0E-149 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 SCD_RS00020 3efc06fac6bf3c424b98503c92c1f670 392 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 15 387 8.3E-144 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 SCD_RS00020 3efc06fac6bf3c424b98503c92c1f670 392 PIRSF PIRSF015557 10 392 1.6E-153 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 SCD_RS13610 3dfad62e6e8167f03688fe502252bf5c 447 PANTHER PTHR10617:SF113 14 398 6.0E-92 T 22-04-2016 SCD_RS13610 3dfad62e6e8167f03688fe502252bf5c 447 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 312 3.511932E-7 T 22-04-2016 SCD_RS13610 3dfad62e6e8167f03688fe502252bf5c 447 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 16 38 3.511932E-7 T 22-04-2016 SCD_RS13610 3dfad62e6e8167f03688fe502252bf5c 447 Gene3D G3DSA:3.50.50.60 15 192 1.5E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS13610 3dfad62e6e8167f03688fe502252bf5c 447 Gene3D G3DSA:3.50.50.60 289 330 1.5E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS13610 3dfad62e6e8167f03688fe502252bf5c 447 PANTHER PTHR10617 14 398 6.0E-92 T 22-04-2016 SCD_RS13610 3dfad62e6e8167f03688fe502252bf5c 447 SUPERFAMILY SSF51905 15 187 1.64E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS13610 3dfad62e6e8167f03688fe502252bf5c 447 SUPERFAMILY SSF51905 284 391 1.64E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS13610 3dfad62e6e8167f03688fe502252bf5c 447 Pfam PF04820 Tryptophan halogenase 16 97 5.0E-12 T 22-04-2016 IPR006905 Tryptophan halogenase SCD_RS13610 3dfad62e6e8167f03688fe502252bf5c 447 Pfam PF04820 Tryptophan halogenase 104 365 8.9E-22 T 22-04-2016 IPR006905 Tryptophan halogenase SCD_RS02255 82f7abdccf72402febe07e9aa4e565e1 260 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 173 256 4.3E-30 T 22-04-2016 IPR013615 CbbQ/NirQ/NorQ, C-terminal SCD_RS02255 82f7abdccf72402febe07e9aa4e565e1 260 SUPERFAMILY SSF52540 14 248 5.51E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02255 82f7abdccf72402febe07e9aa4e565e1 260 Gene3D G3DSA:3.40.50.300 12 177 6.0E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02255 82f7abdccf72402febe07e9aa4e565e1 260 PANTHER PTHR22908 3 252 2.9E-36 T 22-04-2016 SCD_RS02255 82f7abdccf72402febe07e9aa4e565e1 260 Pfam PF07728 AAA domain (dynein-related subfamily) 27 160 5.8E-35 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 SCD_RS03975 e100b5e53735c8023f3b63fe5bd78d78 168 PANTHER PTHR34655 82 168 5.7E-48 T 22-04-2016 SCD_RS03975 e100b5e53735c8023f3b63fe5bd78d78 168 PANTHER PTHR34655 1 66 5.7E-48 T 22-04-2016 SCD_RS03975 e100b5e53735c8023f3b63fe5bd78d78 168 Gene3D G3DSA:3.40.1260.10 1 168 4.4E-44 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS03975 e100b5e53735c8023f3b63fe5bd78d78 168 SUPERFAMILY SSF75169 3 49 1.39E-18 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS03975 e100b5e53735c8023f3b63fe5bd78d78 168 SUPERFAMILY SSF75169 110 166 1.39E-18 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS03975 e100b5e53735c8023f3b63fe5bd78d78 168 PANTHER PTHR34655:SF2 82 168 5.7E-48 T 22-04-2016 SCD_RS03975 e100b5e53735c8023f3b63fe5bd78d78 168 PANTHER PTHR34655:SF2 1 66 5.7E-48 T 22-04-2016 SCD_RS03975 e100b5e53735c8023f3b63fe5bd78d78 168 Pfam PF13686 DsrE/DsrF/DrsH-like family 2 166 2.3E-45 T 22-04-2016 IPR032836 DsrE/DsrF/DrsH-like family SCD_RS11125 66a34b6adc69c35dddc2fae760f91938 359 SUPERFAMILY SSF103515 210 354 5.62E-5 T 22-04-2016 IPR005546 Autotransporter beta-domain SCD_RS11125 66a34b6adc69c35dddc2fae760f91938 359 SUPERFAMILY SSF103515 59 90 5.62E-5 T 22-04-2016 IPR005546 Autotransporter beta-domain SCD_RS11125 66a34b6adc69c35dddc2fae760f91938 359 Pfam PF05275 Copper resistance protein B precursor (CopB) 154 359 6.4E-89 T 22-04-2016 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 SCD_RS04345 8d4599d658e97112e9af4d282afadb3c 212 Pfam PF00694 Aconitase C-terminal domain 1 132 4.7E-37 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04345 8d4599d658e97112e9af4d282afadb3c 212 PANTHER PTHR11670:SF27 1 208 6.2E-103 T 22-04-2016 SCD_RS04345 8d4599d658e97112e9af4d282afadb3c 212 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 43.757 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04345 8d4599d658e97112e9af4d282afadb3c 212 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 8.1E-84 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04345 8d4599d658e97112e9af4d282afadb3c 212 Gene3D G3DSA:3.20.19.10 1 203 6.3E-50 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SCD_RS04345 8d4599d658e97112e9af4d282afadb3c 212 PANTHER PTHR11670 1 208 6.2E-103 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SCD_RS04345 8d4599d658e97112e9af4d282afadb3c 212 SUPERFAMILY SSF52016 1 203 3.14E-63 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SCD_RS11930 ab302c4cb255e1e847721618e367c545 292 Gene3D G3DSA:3.90.1200.10 105 249 3.5E-9 T 22-04-2016 SCD_RS11930 ab302c4cb255e1e847721618e367c545 292 PANTHER PTHR12149 1 292 8.4E-109 T 22-04-2016 SCD_RS11930 ab302c4cb255e1e847721618e367c545 292 PIRSF PIRSF006221 1 292 6.1E-95 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase SCD_RS11930 ab302c4cb255e1e847721618e367c545 292 PANTHER PTHR12149:SF8 1 292 8.4E-109 T 22-04-2016 SCD_RS11930 ab302c4cb255e1e847721618e367c545 292 Pfam PF03881 Fructosamine kinase 1 289 3.1E-102 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase SCD_RS11930 ab302c4cb255e1e847721618e367c545 292 SUPERFAMILY SSF56112 17 284 2.89E-38 T 22-04-2016 IPR011009 Protein kinase-like domain SCD_RS08990 90ddd5e32a3388bd260821975b2b37b9 298 PANTHER PTHR36838 1 298 9.3E-35 T 22-04-2016 SCD_RS08990 90ddd5e32a3388bd260821975b2b37b9 298 Pfam PF03547 Membrane transport protein 153 293 6.0E-18 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 SCD_RS08990 90ddd5e32a3388bd260821975b2b37b9 298 Pfam PF03547 Membrane transport protein 3 122 8.5E-7 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 SCD_RS02780 d434aee3fda1d76cc68728ecba5219cb 191 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 8 186 1.0E-51 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 SCD_RS02780 d434aee3fda1d76cc68728ecba5219cb 191 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 189 19.378 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 SCD_RS02780 d434aee3fda1d76cc68728ecba5219cb 191 PANTHER PTHR37481 1 191 1.0E-26 T 22-04-2016 SCD_RS02780 d434aee3fda1d76cc68728ecba5219cb 191 PANTHER PTHR37481:SF1 1 191 1.0E-26 T 22-04-2016 SCD_RS02780 d434aee3fda1d76cc68728ecba5219cb 191 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 13 187 7.9E-46 T 22-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related SCD_RS02780 d434aee3fda1d76cc68728ecba5219cb 191 Gene3D G3DSA:2.60.450.10 92 181 5.1E-4 T 22-04-2016 SCD_RS00760 4b069f5896790a4a22de7a79b4b8aef0 83 Pfam PF06146 Phosphate-starvation-inducible E 12 75 1.6E-13 T 22-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like SCD_RS00760 4b069f5896790a4a22de7a79b4b8aef0 83 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 8 82 6.7E-31 T 22-04-2016 IPR013468 Conserved hypothetical protein CHP02647 SCD_RS13290 27c5ce4ac133867e69b534f92c046e72 154 PIRSF PIRSF029256 1 154 4.9E-66 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SCD_RS13290 27c5ce4ac133867e69b534f92c046e72 154 SUPERFAMILY SSF75217 2 152 5.49E-43 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SCD_RS13290 27c5ce4ac133867e69b534f92c046e72 154 Gene3D G3DSA:3.40.1280.10 1 153 1.3E-64 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SCD_RS13290 27c5ce4ac133867e69b534f92c046e72 154 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 151 5.0E-59 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SCD_RS13290 27c5ce4ac133867e69b534f92c046e72 154 PANTHER PTHR12029 1 152 5.4E-73 T 22-04-2016 SCD_RS13290 27c5ce4ac133867e69b534f92c046e72 154 Pfam PF00588 SpoU rRNA Methylase family 3 141 5.2E-33 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SCD_RS13290 27c5ce4ac133867e69b534f92c046e72 154 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 32.827 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SCD_RS13290 27c5ce4ac133867e69b534f92c046e72 154 PANTHER PTHR12029:SF31 1 152 5.4E-73 T 22-04-2016 SCD_RS00320 899eec17567ff38dad4c7378bdb42f91 787 Pfam PF07793 Protein of unknown function (DUF1631) 29 783 1.7E-191 T 22-04-2016 IPR012434 Protein of unknown function DUF1631 SCD_RS14100 ed5667d7ec0123cef5eb37879c215abb 268 Pfam PF07728 AAA domain (dynein-related subfamily) 35 169 1.2E-31 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 SCD_RS14100 ed5667d7ec0123cef5eb37879c215abb 268 SUPERFAMILY SSF52540 27 204 1.71E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14100 ed5667d7ec0123cef5eb37879c215abb 268 Gene3D G3DSA:3.40.50.300 27 186 3.9E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14100 ed5667d7ec0123cef5eb37879c215abb 268 PANTHER PTHR22908 14 252 1.5E-37 T 22-04-2016 SCD_RS14100 ed5667d7ec0123cef5eb37879c215abb 268 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 182 265 4.6E-32 T 22-04-2016 IPR013615 CbbQ/NirQ/NorQ, C-terminal SCD_RS09500 13109ea0efaf198add961be2f45f27a5 166 Pfam PF04314 Protein of unknown function (DUF461) 35 142 9.3E-39 T 22-04-2016 IPR007410 DR1885-like metal-binding protein SCD_RS09500 13109ea0efaf198add961be2f45f27a5 166 SUPERFAMILY SSF110087 9 149 6.93E-47 T 22-04-2016 IPR007410 DR1885-like metal-binding protein SCD_RS09500 13109ea0efaf198add961be2f45f27a5 166 PANTHER PTHR36302:SF1 1 165 6.3E-34 T 22-04-2016 SCD_RS09500 13109ea0efaf198add961be2f45f27a5 166 PANTHER PTHR36302 1 165 6.3E-34 T 22-04-2016 SCD_RS12855 2d3d5ed566d8a88870f02ecde750d324 283 PANTHER PTHR42194 4 273 1.2E-111 T 22-04-2016 SCD_RS12855 2d3d5ed566d8a88870f02ecde750d324 283 PANTHER PTHR42194:SF1 4 273 1.2E-111 T 22-04-2016 SCD_RS12855 2d3d5ed566d8a88870f02ecde750d324 283 SUPERFAMILY SSF51658 31 252 4.01E-15 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SCD_RS12855 2d3d5ed566d8a88870f02ecde750d324 283 Gene3D G3DSA:3.20.20.150 8 275 9.5E-97 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SCD_RS12855 2d3d5ed566d8a88870f02ecde750d324 283 Pfam PF05114 Protein of unknown function (DUF692) 9 272 2.0E-97 T 22-04-2016 IPR007801 Uncharacterised protein family UPF0276 SCD_RS14440 2cad3465bc2317f79d47cae7847e93e3 429 Pfam PF02321 Outer membrane efflux protein 230 413 1.8E-34 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SCD_RS14440 2cad3465bc2317f79d47cae7847e93e3 429 Pfam PF02321 Outer membrane efflux protein 23 205 3.1E-26 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SCD_RS14440 2cad3465bc2317f79d47cae7847e93e3 429 SUPERFAMILY SSF56954 4 417 1.83E-92 T 22-04-2016 SCD_RS14440 2cad3465bc2317f79d47cae7847e93e3 429 PANTHER PTHR30026 6 429 1.2E-108 T 22-04-2016 SCD_RS14440 2cad3465bc2317f79d47cae7847e93e3 429 PANTHER PTHR30026:SF3 6 429 1.2E-108 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 SCD_RS14440 2cad3465bc2317f79d47cae7847e93e3 429 Gene3D G3DSA:1.20.1600.10 15 419 9.6E-81 T 22-04-2016 SCD_RS14440 2cad3465bc2317f79d47cae7847e93e3 429 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 18 427 3.3E-106 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 SCD_RS14260 e120e1d44862dd2be586fbd69ca09410 304 SUPERFAMILY SSF53335 74 275 7.01E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS14260 e120e1d44862dd2be586fbd69ca09410 304 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 118 250 6.9E-28 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SCD_RS14260 e120e1d44862dd2be586fbd69ca09410 304 Gene3D G3DSA:3.40.50.150 114 276 1.8E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS14260 e120e1d44862dd2be586fbd69ca09410 304 Pfam PF05050 Methyltransferase FkbM domain 120 273 2.1E-17 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SCD_RS06835 937bf8b9f70dc0f641345f50873e0308 106 Gene3D G3DSA:3.30.460.10 5 103 1.1E-18 T 22-04-2016 SCD_RS06835 937bf8b9f70dc0f641345f50873e0308 106 Pfam PF01909 Nucleotidyltransferase domain 19 78 4.7E-9 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SCD_RS06835 937bf8b9f70dc0f641345f50873e0308 106 SUPERFAMILY SSF81301 6 102 2.03E-15 T 22-04-2016 SCD_RS11770 fd3f4d483fad9258e0063a7195d4cfad 511 PANTHER PTHR39569:SF1 3 510 1.7E-57 T 22-04-2016 SCD_RS11770 fd3f4d483fad9258e0063a7195d4cfad 511 SMART SM01118 3 206 1.2E-37 T 22-04-2016 IPR023577 CYTH domain SCD_RS11770 fd3f4d483fad9258e0063a7195d4cfad 511 Pfam PF01928 CYTH domain 4 200 1.3E-29 T 22-04-2016 IPR023577 CYTH domain SCD_RS11770 fd3f4d483fad9258e0063a7195d4cfad 511 PANTHER PTHR39569 3 510 1.7E-57 T 22-04-2016 SCD_RS11770 fd3f4d483fad9258e0063a7195d4cfad 511 Gene3D G3DSA:2.40.320.10 4 206 3.9E-33 T 22-04-2016 IPR023577 CYTH domain SCD_RS11770 fd3f4d483fad9258e0063a7195d4cfad 511 Pfam PF05235 CHAD domain 235 462 1.4E-52 T 22-04-2016 IPR007899 CHAD domain SCD_RS11770 fd3f4d483fad9258e0063a7195d4cfad 511 SMART SM00880 232 493 2.8E-64 T 22-04-2016 IPR007899 CHAD domain SCD_RS11770 fd3f4d483fad9258e0063a7195d4cfad 511 SUPERFAMILY SSF55154 3 211 3.43E-42 T 22-04-2016 IPR033469 CYTH-like domain SCD_RS09895 ecf489affb474c055b810c1a60295dac 936 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 220 241 9.2E-37 T 22-04-2016 SCD_RS09895 ecf489affb474c055b810c1a60295dac 936 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 310 322 9.2E-37 T 22-04-2016 SCD_RS09895 ecf489affb474c055b810c1a60295dac 936 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 419 438 9.2E-37 T 22-04-2016 SCD_RS09895 ecf489affb474c055b810c1a60295dac 936 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 242 268 9.2E-37 T 22-04-2016 SCD_RS09895 ecf489affb474c055b810c1a60295dac 936 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 79 104 9.2E-37 T 22-04-2016 SCD_RS09895 ecf489affb474c055b810c1a60295dac 936 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 107 127 9.2E-37 T 22-04-2016 SCD_RS09895 ecf489affb474c055b810c1a60295dac 936 PANTHER PTHR22773 1 528 1.0E-214 T 22-04-2016 SCD_RS09895 ecf489affb474c055b810c1a60295dac 936 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 117 1.9E-10 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal SCD_RS09895 ecf489affb474c055b810c1a60295dac 936 Pfam PF13244 Domain of unknown function (DUF4040) 614 678 1.2E-20 T 22-04-2016 IPR025383 Domain of unknown function DUF4040 SCD_RS09895 ecf489affb474c055b810c1a60295dac 936 Pfam PF00361 Proton-conducting membrane transporter 130 402 4.3E-61 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SCD_RS09895 ecf489affb474c055b810c1a60295dac 936 PANTHER PTHR22773:SF46 1 528 1.0E-214 T 22-04-2016 SCD_RS09895 ecf489affb474c055b810c1a60295dac 936 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 792 914 7.5E-34 T 22-04-2016 IPR007182 Na+/H+ antiporter MnhB subunit-related protein SCD_RS09325 c82a7bea8dc28464dac5c05bccf82b92 170 PANTHER PTHR11124 1 166 3.7E-19 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 SCD_RS09325 c82a7bea8dc28464dac5c05bccf82b92 170 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 159 2.7E-28 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type SCD_RS09325 c82a7bea8dc28464dac5c05bccf82b92 170 PANTHER PTHR11124:SF10 1 166 3.7E-19 T 22-04-2016 SCD_RS09325 c82a7bea8dc28464dac5c05bccf82b92 170 SUPERFAMILY SSF56300 1 159 5.43E-26 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SCD_RS09325 c82a7bea8dc28464dac5c05bccf82b92 170 Gene3D G3DSA:3.60.21.10 1 165 3.2E-30 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SCD_RS04525 c83000f82962b9c1ec18a30ac1715cd1 107 Pfam PF01909 Nucleotidyltransferase domain 11 84 6.8E-12 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SCD_RS04525 c83000f82962b9c1ec18a30ac1715cd1 107 SUPERFAMILY SSF81301 6 105 9.61E-21 T 22-04-2016 SCD_RS04525 c83000f82962b9c1ec18a30ac1715cd1 107 Gene3D G3DSA:3.30.460.10 2 105 2.4E-21 T 22-04-2016 SCD_RS13570 5ab06fca9bbff8c9aeed66972c552989 267 Pfam PF13557 Putative MetA-pathway of phenol degradation 92 249 9.3E-5 T 22-04-2016 IPR025737 MetA-pathway of phenol degradation, putative SCD_RS13530 2b112c93bc82a6ceeca4caf821408183 641 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 631 6.4E-226 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13530 2b112c93bc82a6ceeca4caf821408183 641 Pfam PF01578 Cytochrome C assembly protein 89 294 5.1E-52 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SCD_RS13530 2b112c93bc82a6ceeca4caf821408183 641 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 9.9E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13530 2b112c93bc82a6ceeca4caf821408183 641 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 393 412 9.9E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13530 2b112c93bc82a6ceeca4caf821408183 641 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 9.9E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13530 2b112c93bc82a6ceeca4caf821408183 641 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 188 203 9.9E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13530 2b112c93bc82a6ceeca4caf821408183 641 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 621 634 9.9E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13530 2b112c93bc82a6ceeca4caf821408183 641 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 312 327 9.9E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13530 2b112c93bc82a6ceeca4caf821408183 641 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 350 367 9.9E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13530 2b112c93bc82a6ceeca4caf821408183 641 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 314 628 2.5E-129 T 22-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal SCD_RS13530 2b112c93bc82a6ceeca4caf821408183 641 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 273 293 5.1E-84 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13530 2b112c93bc82a6ceeca4caf821408183 641 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 209 235 5.1E-84 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13530 2b112c93bc82a6ceeca4caf821408183 641 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 293 309 5.1E-84 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13530 2b112c93bc82a6ceeca4caf821408183 641 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 243 263 5.1E-84 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13530 2b112c93bc82a6ceeca4caf821408183 641 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 5.1E-84 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13530 2b112c93bc82a6ceeca4caf821408183 641 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 309 328 5.1E-84 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13530 2b112c93bc82a6ceeca4caf821408183 641 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 158 180 5.1E-84 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13530 2b112c93bc82a6ceeca4caf821408183 641 PANTHER PTHR30009:SF0 1 416 3.0E-298 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13530 2b112c93bc82a6ceeca4caf821408183 641 PANTHER PTHR30009:SF0 460 636 3.0E-298 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13530 2b112c93bc82a6ceeca4caf821408183 641 PANTHER PTHR30009 1 416 3.0E-298 T 22-04-2016 SCD_RS13530 2b112c93bc82a6ceeca4caf821408183 641 PANTHER PTHR30009 460 636 3.0E-298 T 22-04-2016 SCD_RS04890 e79aea232f75f97658015e67ba70c484 349 SMART SM01133 68 325 4.4E-42 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SCD_RS04890 e79aea232f75f97658015e67ba70c484 349 Pfam PF01791 DeoC/LacD family aldolase 69 325 4.5E-66 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SCD_RS04890 e79aea232f75f97658015e67ba70c484 349 SUPERFAMILY SSF51569 58 242 7.69E-65 T 22-04-2016 SCD_RS04890 e79aea232f75f97658015e67ba70c484 349 SUPERFAMILY SSF51569 270 342 7.69E-65 T 22-04-2016 SCD_RS04890 e79aea232f75f97658015e67ba70c484 349 Gene3D G3DSA:3.20.20.70 53 344 4.8E-98 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS00825 45f1388e40d94c3706e7e118ae2b3f33 102 PANTHER PTHR11780:SF12 5 102 1.6E-26 T 22-04-2016 SCD_RS00825 45f1388e40d94c3706e7e118ae2b3f33 102 SUPERFAMILY SSF52833 4 101 8.61E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS00825 45f1388e40d94c3706e7e118ae2b3f33 102 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 19 89 1.2E-6 T 22-04-2016 SCD_RS00825 45f1388e40d94c3706e7e118ae2b3f33 102 PANTHER PTHR11780 5 102 1.6E-26 T 22-04-2016 SCD_RS00825 45f1388e40d94c3706e7e118ae2b3f33 102 Gene3D G3DSA:3.40.30.10 4 100 4.7E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS14870 735603631e0c05a433a011000f2dc4aa 359 Pfam PF00881 Nitroreductase family 8 34 1.1E-4 T 22-04-2016 IPR029479 Nitroreductase SCD_RS14870 735603631e0c05a433a011000f2dc4aa 359 Gene3D G3DSA:3.40.109.10 8 55 2.1E-13 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SCD_RS14870 735603631e0c05a433a011000f2dc4aa 359 Gene3D G3DSA:3.40.109.10 242 285 2.1E-13 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SCD_RS14870 735603631e0c05a433a011000f2dc4aa 359 SUPERFAMILY SSF55469 8 79 9.55E-9 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SCD_RS14285 907c38dfafa49ba15fdce91e3f56b13b 221 SUPERFAMILY SSF55729 93 218 7.27E-10 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS14285 907c38dfafa49ba15fdce91e3f56b13b 221 Gene3D G3DSA:3.40.630.30 88 208 4.6E-6 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS03565 849371b93ab54a844af9d58193e8e0ec 88 Pfam PF09905 Uncharacterized conserved protein (DUF2132) 12 71 1.3E-29 T 22-04-2016 IPR018668 DNA-binding protein VF530-like, bacteria GO:0003677 SCD_RS03565 849371b93ab54a844af9d58193e8e0ec 88 Gene3D G3DSA:1.10.720.30 17 74 3.3E-29 T 22-04-2016 IPR003034 SAP domain SCD_RS14635 2c9b5203e1ff20c4b20bcad8d9323c83 422 TIGRFAM TIGR03087 stp1: sugar transferase, PEP-CTERM/EpsH1 system associated 4 395 2.1E-181 T 22-04-2016 IPR017521 Sugar transferase, PEP-CTERM, Stp1 SCD_RS14635 2c9b5203e1ff20c4b20bcad8d9323c83 422 PANTHER PTHR12526 121 400 5.9E-18 T 22-04-2016 SCD_RS14635 2c9b5203e1ff20c4b20bcad8d9323c83 422 SUPERFAMILY SSF53756 4 394 5.76E-34 T 22-04-2016 SCD_RS14635 2c9b5203e1ff20c4b20bcad8d9323c83 422 Pfam PF13692 Glycosyl transferases group 1 228 363 5.6E-31 T 22-04-2016 SCD_RS10865 a6195e1d2ead42515d87fbf3e4967615 82 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 10 43 2.0E-7 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SCD_RS10865 a6195e1d2ead42515d87fbf3e4967615 82 Pfam PF02609 Exonuclease VII small subunit 10 60 6.6E-21 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SCD_RS10865 a6195e1d2ead42515d87fbf3e4967615 82 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 9 63 1.2E-22 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SCD_RS10865 a6195e1d2ead42515d87fbf3e4967615 82 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 9 69 14.357 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SCD_RS10865 a6195e1d2ead42515d87fbf3e4967615 82 PANTHER PTHR34137 1 81 2.4E-17 T 22-04-2016 SCD_RS10865 a6195e1d2ead42515d87fbf3e4967615 82 Gene3D G3DSA:1.10.287.1040 6 72 2.1E-25 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SCD_RS10865 a6195e1d2ead42515d87fbf3e4967615 82 PIRSF PIRSF006488 1 80 9.3E-24 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SCD_RS10865 a6195e1d2ead42515d87fbf3e4967615 82 SUPERFAMILY SSF116842 3 70 1.57E-20 T 22-04-2016 SCD_RS03665 f57e661952f46b8200047618cce30a7f 1107 Pfam PF13361 UvrD-like helicase C-terminal domain 756 876 5.6E-12 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SCD_RS03665 f57e661952f46b8200047618cce30a7f 1107 SUPERFAMILY SSF52540 852 883 1.63E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03665 f57e661952f46b8200047618cce30a7f 1107 SUPERFAMILY SSF52540 9 69 1.63E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03665 f57e661952f46b8200047618cce30a7f 1107 SUPERFAMILY SSF52540 109 189 1.63E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03665 f57e661952f46b8200047618cce30a7f 1107 SUPERFAMILY SSF52540 336 491 1.63E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03665 f57e661952f46b8200047618cce30a7f 1107 SUPERFAMILY SSF52540 547 805 1.63E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03665 f57e661952f46b8200047618cce30a7f 1107 Pfam PF00580 UvrD/REP helicase N-terminal domain 5 446 3.4E-47 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SCD_RS03665 f57e661952f46b8200047618cce30a7f 1107 Gene3D G3DSA:3.40.50.300 8 65 7.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03665 f57e661952f46b8200047618cce30a7f 1107 Gene3D G3DSA:3.40.50.300 346 447 7.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03665 f57e661952f46b8200047618cce30a7f 1107 Gene3D G3DSA:3.40.50.300 117 177 7.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03665 f57e661952f46b8200047618cce30a7f 1107 Gene3D G3DSA:1.10.486.10 613 755 7.1E-11 T 22-04-2016 SCD_RS03665 f57e661952f46b8200047618cce30a7f 1107 PANTHER PTHR11070 851 886 2.3E-86 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SCD_RS03665 f57e661952f46b8200047618cce30a7f 1107 PANTHER PTHR11070 311 521 2.3E-86 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SCD_RS03665 f57e661952f46b8200047618cce30a7f 1107 PANTHER PTHR11070 9 77 2.3E-86 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SCD_RS03665 f57e661952f46b8200047618cce30a7f 1107 PANTHER PTHR11070 542 817 2.3E-86 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SCD_RS03665 f57e661952f46b8200047618cce30a7f 1107 PANTHER PTHR11070 109 200 2.3E-86 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SCD_RS03665 f57e661952f46b8200047618cce30a7f 1107 Gene3D G3DSA:3.40.50.300 771 886 3.2E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS03665 f57e661952f46b8200047618cce30a7f 1107 Gene3D G3DSA:3.40.50.300 467 605 3.2E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS01525 83b7697a034b547c7f70284ee9d4aed2 289 PIRSF PIRSF026649 1 288 2.8E-90 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SCD_RS01525 83b7697a034b547c7f70284ee9d4aed2 289 PANTHER PTHR30606 4 289 3.7E-92 T 22-04-2016 SCD_RS01525 83b7697a034b547c7f70284ee9d4aed2 289 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 4 278 8.1E-71 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SCD_RS01525 83b7697a034b547c7f70284ee9d4aed2 289 PANTHER PTHR30606:SF5 4 289 3.7E-92 T 22-04-2016 SCD_RS10075 327b13b5aca454d25e1b30d1627f4fe4 144 PANTHER PTHR37819:SF1 1 135 3.0E-31 T 22-04-2016 SCD_RS10075 327b13b5aca454d25e1b30d1627f4fe4 144 PIRSF PIRSF029598 1 131 2.1E-33 T 22-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 SCD_RS10075 327b13b5aca454d25e1b30d1627f4fe4 144 Pfam PF06146 Phosphate-starvation-inducible E 47 113 6.7E-17 T 22-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like SCD_RS10075 327b13b5aca454d25e1b30d1627f4fe4 144 PANTHER PTHR37819 1 135 3.0E-31 T 22-04-2016 SCD_RS11515 34469b4cbb4f793791cb9a72d1cb2be4 203 Gene3D G3DSA:3.40.109.10 4 189 2.9E-48 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SCD_RS11515 34469b4cbb4f793791cb9a72d1cb2be4 203 SUPERFAMILY SSF55469 6 197 3.8E-46 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SCD_RS11515 34469b4cbb4f793791cb9a72d1cb2be4 203 PANTHER PTHR23026 11 201 5.3E-32 T 22-04-2016 SCD_RS11515 34469b4cbb4f793791cb9a72d1cb2be4 203 Pfam PF00881 Nitroreductase family 16 162 1.4E-24 T 22-04-2016 IPR029479 Nitroreductase SCD_RS06445 dd23f82122675c587567892d518be4c3 307 Gene3D G3DSA:1.25.40.10 138 300 1.5E-36 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS06445 dd23f82122675c587567892d518be4c3 307 PANTHER PTHR23083 4 301 4.3E-55 T 22-04-2016 SCD_RS06445 dd23f82122675c587567892d518be4c3 307 SMART SM00028 88 121 0.049 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06445 dd23f82122675c587567892d518be4c3 307 SMART SM00028 156 189 0.0044 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06445 dd23f82122675c587567892d518be4c3 307 SMART SM00028 122 155 3.7 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06445 dd23f82122675c587567892d518be4c3 307 SMART SM00028 257 290 2.4E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06445 dd23f82122675c587567892d518be4c3 307 SMART SM00028 20 53 0.0059 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06445 dd23f82122675c587567892d518be4c3 307 SMART SM00028 190 223 0.35 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06445 dd23f82122675c587567892d518be4c3 307 Pfam PF13432 Tetratricopeptide repeat 160 223 4.7E-7 T 22-04-2016 SCD_RS06445 dd23f82122675c587567892d518be4c3 307 Pfam PF13432 Tetratricopeptide repeat 26 81 1.6E-6 T 22-04-2016 SCD_RS06445 dd23f82122675c587567892d518be4c3 307 SUPERFAMILY SSF81901 4 226 1.2E-36 T 22-04-2016 SCD_RS06445 dd23f82122675c587567892d518be4c3 307 Pfam PF14559 Tetratricopeptide repeat 242 300 4.1E-6 T 22-04-2016 SCD_RS06445 dd23f82122675c587567892d518be4c3 307 Gene3D G3DSA:1.25.40.10 102 137 8.5E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS06445 dd23f82122675c587567892d518be4c3 307 Pfam PF13181 Tetratricopeptide repeat 126 154 0.015 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06445 dd23f82122675c587567892d518be4c3 307 Pfam PF13181 Tetratricopeptide repeat 88 115 0.027 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS06445 dd23f82122675c587567892d518be4c3 307 SUPERFAMILY SSF48452 192 300 3.59E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS06445 dd23f82122675c587567892d518be4c3 307 Gene3D G3DSA:1.25.40.10 4 101 1.7E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS13735 68be4ed23bf02a64afd4383700ed1418 312 PANTHER PTHR10584:SF15 1 312 6.7E-99 T 22-04-2016 SCD_RS13735 68be4ed23bf02a64afd4383700ed1418 312 PANTHER PTHR10584 1 312 6.7E-99 T 22-04-2016 SCD_RS13735 68be4ed23bf02a64afd4383700ed1418 312 Gene3D G3DSA:3.40.1190.20 1 304 3.0E-57 T 22-04-2016 IPR029056 Ribokinase-like SCD_RS13735 68be4ed23bf02a64afd4383700ed1418 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SCD_RS13735 68be4ed23bf02a64afd4383700ed1418 312 SUPERFAMILY SSF53613 1 297 3.27E-61 T 22-04-2016 IPR029056 Ribokinase-like SCD_RS13735 68be4ed23bf02a64afd4383700ed1418 312 Pfam PF00294 pfkB family carbohydrate kinase 36 290 3.9E-38 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB SCD_RS05775 a63edb02ce5c5e54019bb6de610d6a2a 253 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 253 1.2E-24 T 22-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 SCD_RS05775 a63edb02ce5c5e54019bb6de610d6a2a 253 Gene3D G3DSA:3.60.15.10 2 253 5.2E-86 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS05775 a63edb02ce5c5e54019bb6de610d6a2a 253 PANTHER PTHR11935:SF7 1 253 5.5E-88 T 22-04-2016 SCD_RS05775 a63edb02ce5c5e54019bb6de610d6a2a 253 PIRSF PIRSF005457 1 253 4.2E-103 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 SCD_RS05775 a63edb02ce5c5e54019bb6de610d6a2a 253 SUPERFAMILY SSF56281 1 253 4.98E-70 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS05775 a63edb02ce5c5e54019bb6de610d6a2a 253 SMART SM00849 11 165 1.7E-31 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS05775 a63edb02ce5c5e54019bb6de610d6a2a 253 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 3 253 4.7E-102 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 SCD_RS05775 a63edb02ce5c5e54019bb6de610d6a2a 253 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 253 43.917 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 SCD_RS05775 a63edb02ce5c5e54019bb6de610d6a2a 253 PANTHER PTHR11935 1 253 5.5E-88 T 22-04-2016 SCD_RS05775 a63edb02ce5c5e54019bb6de610d6a2a 253 Pfam PF00753 Metallo-beta-lactamase superfamily 13 165 2.4E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS02640 25f1b79dbe17a2fe70e7b3b3f5c4b61e 66 SUPERFAMILY SSF54285 2 65 2.47E-19 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SCD_RS02640 25f1b79dbe17a2fe70e7b3b3f5c4b61e 66 PANTHER PTHR34472:SF1 1 66 1.6E-22 T 22-04-2016 SCD_RS02640 25f1b79dbe17a2fe70e7b3b3f5c4b61e 66 Gene3D G3DSA:3.10.20.30 1 66 1.9E-27 T 22-04-2016 IPR012675 Beta-grasp domain SCD_RS02640 25f1b79dbe17a2fe70e7b3b3f5c4b61e 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 3.9E-23 T 22-04-2016 IPR010035 ThiS, thiamine-biosynthesis SCD_RS02640 25f1b79dbe17a2fe70e7b3b3f5c4b61e 66 Pfam PF02597 ThiS family 10 66 4.6E-13 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 SCD_RS02640 25f1b79dbe17a2fe70e7b3b3f5c4b61e 66 PANTHER PTHR34472 1 66 1.6E-22 T 22-04-2016 SCD_RS13335 a033a39f23d053945579f1dc5f00b8ec 341 SUPERFAMILY SSF111369 40 266 1.18E-30 T 22-04-2016 SCD_RS13335 a033a39f23d053945579f1dc5f00b8ec 341 PANTHER PTHR30469:SF15 25 331 1.3E-66 T 22-04-2016 SCD_RS13335 a033a39f23d053945579f1dc5f00b8ec 341 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 261 1.2E-25 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SCD_RS13335 a033a39f23d053945579f1dc5f00b8ec 341 Gene3D G3DSA:2.40.50.100 156 186 5.8E-18 T 22-04-2016 SCD_RS13335 a033a39f23d053945579f1dc5f00b8ec 341 Gene3D G3DSA:2.40.50.100 48 81 5.8E-18 T 22-04-2016 SCD_RS13335 a033a39f23d053945579f1dc5f00b8ec 341 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 25 331 2.0E-62 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SCD_RS13335 a033a39f23d053945579f1dc5f00b8ec 341 PANTHER PTHR30469 25 331 1.3E-66 T 22-04-2016 SCD_RS14915 d639148ac04dc37ba4adbaddbd690d35 218 SUPERFAMILY SSF52833 30 209 2.74E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS14915 d639148ac04dc37ba4adbaddbd690d35 218 Pfam PF01323 DSBA-like thioredoxin domain 70 187 4.9E-13 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 SCD_RS14915 d639148ac04dc37ba4adbaddbd690d35 218 Gene3D G3DSA:3.40.30.10 34 214 6.2E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS14915 d639148ac04dc37ba4adbaddbd690d35 218 PANTHER PTHR35891 6 217 4.7E-42 T 22-04-2016 SCD_RS14915 d639148ac04dc37ba4adbaddbd690d35 218 PANTHER PTHR35891:SF2 6 217 4.7E-42 T 22-04-2016 SCD_RS14915 d639148ac04dc37ba4adbaddbd690d35 218 PIRSF PIRSF001488 11 215 6.3E-43 T 22-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL SCD_RS02310 8ed92de2555a9434f7e2b3e337a77e91 86 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 17 85 1.2E-25 T 22-04-2016 IPR018720 Domain of unknown function DUF2249 SCD_RS01030 8502985c0381f889527540a8ffbe954e 121 Gene3D G3DSA:1.10.10.10 53 104 7.3E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS01030 8502985c0381f889527540a8ffbe954e 121 SUPERFAMILY SSF46785 52 103 4.97E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS14940 8821c175ac26998eda6448c208ee6383 459 PANTHER PTHR22572 6 449 1.0E-203 T 22-04-2016 SCD_RS14940 8821c175ac26998eda6448c208ee6383 459 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 454 2.7E-187 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 SCD_RS14940 8821c175ac26998eda6448c208ee6383 459 Gene3D G3DSA:3.90.550.10 3 243 1.6E-66 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS14940 8821c175ac26998eda6448c208ee6383 459 Gene3D G3DSA:2.160.10.10 325 454 9.2E-35 T 22-04-2016 SCD_RS14940 8821c175ac26998eda6448c208ee6383 459 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 429 2.7E-8 T 22-04-2016 IPR001451 Hexapeptide repeat SCD_RS14940 8821c175ac26998eda6448c208ee6383 459 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 299 1.9E-5 T 22-04-2016 IPR001451 Hexapeptide repeat SCD_RS14940 8821c175ac26998eda6448c208ee6383 459 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 318 351 2.2E-4 T 22-04-2016 IPR001451 Hexapeptide repeat SCD_RS14940 8821c175ac26998eda6448c208ee6383 459 Gene3D G3DSA:2.160.10.10 244 324 6.4E-17 T 22-04-2016 SCD_RS14940 8821c175ac26998eda6448c208ee6383 459 PANTHER PTHR22572:SF115 6 449 1.0E-203 T 22-04-2016 SCD_RS14940 8821c175ac26998eda6448c208ee6383 459 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 4 452 42.333 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 SCD_RS14940 8821c175ac26998eda6448c208ee6383 459 SUPERFAMILY SSF53448 5 252 4.8E-61 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS14940 8821c175ac26998eda6448c208ee6383 459 SUPERFAMILY SSF51161 254 436 2.63E-53 T 22-04-2016 IPR011004 Trimeric LpxA-like SCD_RS14940 8821c175ac26998eda6448c208ee6383 459 Pfam PF12804 MobA-like NTP transferase domain 8 128 1.1E-21 T 22-04-2016 IPR025877 MobA-like NTP transferase SCD_RS13110 5d1eb29b7dd1ec95b008b6ba0da739bb 188 Pfam PF02630 SCO1/SenC 30 163 1.0E-36 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC SCD_RS13110 5d1eb29b7dd1ec95b008b6ba0da739bb 188 SUPERFAMILY SSF52833 28 185 6.64E-48 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS13110 5d1eb29b7dd1ec95b008b6ba0da739bb 188 PANTHER PTHR12151 26 184 2.0E-45 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC SCD_RS13110 5d1eb29b7dd1ec95b008b6ba0da739bb 188 Gene3D G3DSA:3.40.30.10 2 186 1.1E-52 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS13110 5d1eb29b7dd1ec95b008b6ba0da739bb 188 PANTHER PTHR12151:SF0 26 184 2.0E-45 T 22-04-2016 SCD_RS03950 efc146ea88cb2d5ad390a9a8d734a964 102 PANTHER PTHR33473 14 100 6.2E-35 T 22-04-2016 SCD_RS03950 efc146ea88cb2d5ad390a9a8d734a964 102 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 4 97 27.912 T 22-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS SCD_RS03950 efc146ea88cb2d5ad390a9a8d734a964 102 Gene3D G3DSA:3.30.1390.10 4 101 7.2E-42 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SCD_RS03950 efc146ea88cb2d5ad390a9a8d734a964 102 SUPERFAMILY SSF54736 17 101 1.99E-32 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SCD_RS03950 efc146ea88cb2d5ad390a9a8d734a964 102 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 19 97 8.2E-35 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 SCD_RS14700 aa0a1cbd6d69d93117c0a37d6c139ca0 387 Gene3D G3DSA:3.40.50.2000 162 358 9.8E-33 T 22-04-2016 SCD_RS14700 aa0a1cbd6d69d93117c0a37d6c139ca0 387 Pfam PF00534 Glycosyl transferases group 1 190 357 3.1E-37 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SCD_RS14700 aa0a1cbd6d69d93117c0a37d6c139ca0 387 SUPERFAMILY SSF53756 1 380 8.72E-81 T 22-04-2016 SCD_RS14700 aa0a1cbd6d69d93117c0a37d6c139ca0 387 Pfam PF13439 Glycosyltransferase Family 4 16 178 1.2E-20 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SCD_RS14700 aa0a1cbd6d69d93117c0a37d6c139ca0 387 PANTHER PTHR12526 2 377 3.0E-67 T 22-04-2016 SCD_RS01180 b6711caa9b2d3d50216448668d387b28 257 SMART SM00477 44 238 5.1E-65 T 22-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 SCD_RS01180 b6711caa9b2d3d50216448668d387b28 257 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 103 111 - T 22-04-2016 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 SCD_RS01180 b6711caa9b2d3d50216448668d387b28 257 Gene3D G3DSA:3.40.570.10 25 252 9.6E-73 T 22-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 SCD_RS01180 b6711caa9b2d3d50216448668d387b28 257 SMART SM00892 43 238 6.9E-60 T 22-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 SCD_RS01180 b6711caa9b2d3d50216448668d387b28 257 PANTHER PTHR13966 28 235 3.1E-63 T 22-04-2016 SCD_RS01180 b6711caa9b2d3d50216448668d387b28 257 Pfam PF01223 DNA/RNA non-specific endonuclease 32 235 5.9E-57 T 22-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 SCD_RS01180 b6711caa9b2d3d50216448668d387b28 257 SUPERFAMILY SSF54060 37 246 4.53E-69 T 22-04-2016 SCD_RS03615 822e50165aadcb3541f65796f625bd1c 110 PANTHER PTHR35893 7 110 7.2E-23 T 22-04-2016 SCD_RS03615 822e50165aadcb3541f65796f625bd1c 110 Pfam PF05957 Bacterial protein of unknown function (DUF883) 18 110 5.3E-30 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB SCD_RS03615 822e50165aadcb3541f65796f625bd1c 110 PANTHER PTHR35893:SF3 7 110 7.2E-23 T 22-04-2016 SCD_RS03705 d3ca6277a7694865a23ef3133b6aee6e 166 Pfam PF01927 Mut7-C RNAse domain 5 149 4.7E-34 T 22-04-2016 IPR002782 Mut7-C RNAse domain SCD_RS03705 d3ca6277a7694865a23ef3133b6aee6e 166 PANTHER PTHR39081 6 155 6.5E-14 T 22-04-2016 SCD_RS12510 e78ec702c5c18628596a4fc9cf06432f 342 SUPERFAMILY SSF52418 76 338 1.96E-97 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SCD_RS12510 e78ec702c5c18628596a4fc9cf06432f 342 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 64 2.3E-18 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SCD_RS12510 e78ec702c5c18628596a4fc9cf06432f 342 Gene3D G3DSA:3.40.1030.10 74 337 2.6E-107 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SCD_RS12510 e78ec702c5c18628596a4fc9cf06432f 342 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 8 334 1.8E-132 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 SCD_RS12510 e78ec702c5c18628596a4fc9cf06432f 342 Pfam PF00591 Glycosyl transferase family, a/b domain 75 325 3.2E-99 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SCD_RS12510 e78ec702c5c18628596a4fc9cf06432f 342 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 335 38.835 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 SCD_RS12510 e78ec702c5c18628596a4fc9cf06432f 342 SUPERFAMILY SSF47648 1 69 7.98E-19 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SCD_RS12510 e78ec702c5c18628596a4fc9cf06432f 342 Gene3D G3DSA:1.20.970.10 6 70 8.8E-28 T 22-04-2016 SCD_RS13885 c62dea3864ab20892c8afe6ae170f4d0 144 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 14 144 1.7E-52 T 22-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 SCD_RS13885 c62dea3864ab20892c8afe6ae170f4d0 144 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 11 32 1.8E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS13885 c62dea3864ab20892c8afe6ae170f4d0 144 Gene3D G3DSA:3.30.700.10 15 101 5.3E-10 T 22-04-2016 SCD_RS13885 c62dea3864ab20892c8afe6ae170f4d0 144 Pfam PF08334 Type II secretion system (T2SS), protein G 38 144 1.6E-42 T 22-04-2016 IPR013545 Type II secretion system protein G SCD_RS13885 c62dea3864ab20892c8afe6ae170f4d0 144 PANTHER PTHR30093 14 144 1.6E-45 T 22-04-2016 SCD_RS13885 c62dea3864ab20892c8afe6ae170f4d0 144 SUPERFAMILY SSF54523 41 144 6.8E-35 T 22-04-2016 SCD_RS13885 c62dea3864ab20892c8afe6ae170f4d0 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 33 1.6E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS13885 c62dea3864ab20892c8afe6ae170f4d0 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 50 68 6.3E-16 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SCD_RS13885 c62dea3864ab20892c8afe6ae170f4d0 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 14 39 6.3E-16 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SCD_RS13885 c62dea3864ab20892c8afe6ae170f4d0 144 PANTHER PTHR30093:SF9 14 144 1.6E-45 T 22-04-2016 SCD_RS00385 cca11f7272ed8dbfcd0613ead65d1fbf 172 Pfam PF00578 AhpC/TSA family 37 151 2.5E-25 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SCD_RS00385 cca11f7272ed8dbfcd0613ead65d1fbf 172 SUPERFAMILY SSF52833 35 171 1.08E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS00385 cca11f7272ed8dbfcd0613ead65d1fbf 172 Gene3D G3DSA:3.40.30.10 14 172 4.3E-47 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS00385 cca11f7272ed8dbfcd0613ead65d1fbf 172 PANTHER PTHR10681:SF104 3 156 1.7E-27 T 22-04-2016 SCD_RS00385 cca11f7272ed8dbfcd0613ead65d1fbf 172 ProSitePatterns PS00194 Thioredoxin family active site. 63 81 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SCD_RS00385 cca11f7272ed8dbfcd0613ead65d1fbf 172 PANTHER PTHR10681 3 156 1.7E-27 T 22-04-2016 SCD_RS10690 c4016ad0d55b0bb7defdbb766a90651a 181 SUPERFAMILY SSF101874 24 180 7.72E-38 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SCD_RS10690 c4016ad0d55b0bb7defdbb766a90651a 181 Gene3D G3DSA:2.40.128.110 27 180 1.5E-35 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SCD_RS10690 c4016ad0d55b0bb7defdbb766a90651a 181 Pfam PF04264 YceI-like domain 27 179 6.8E-29 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SCD_RS10690 c4016ad0d55b0bb7defdbb766a90651a 181 PANTHER PTHR34406:SF1 1 181 2.1E-24 T 22-04-2016 SCD_RS10690 c4016ad0d55b0bb7defdbb766a90651a 181 SMART SM00867 20 181 3.3E-38 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SCD_RS10690 c4016ad0d55b0bb7defdbb766a90651a 181 PANTHER PTHR34406 1 181 2.1E-24 T 22-04-2016 SCD_RS14250 db623b0c471d16a9dcd6bec8fd7df39f 304 SUPERFAMILY SSF53448 7 244 4.39E-19 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS14250 db623b0c471d16a9dcd6bec8fd7df39f 304 Gene3D G3DSA:3.90.550.10 5 130 5.4E-8 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS14250 db623b0c471d16a9dcd6bec8fd7df39f 304 Pfam PF00535 Glycosyl transferase family 2 7 156 4.1E-7 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SCD_RS03590 73d122aafa8f5e8d5d5c91b8cf10e599 390 Pfam PF01594 Domain of unknown function DUF20 37 377 2.2E-44 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SCD_RS03590 73d122aafa8f5e8d5d5c91b8cf10e599 390 PANTHER PTHR21716 36 389 6.5E-52 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SCD_RS00620 1b7194da503ed5dce7745590db46358c 134 Pfam PF14462 Prokaryotic E2 family E 5 130 9.4E-41 T 22-04-2016 IPR025701 Ubiquitin-conjugating enzyme, E2, family E SCD_RS01545 afae510584569a5d7ff1aed67a62b13b 216 Pfam PF04340 Protein of unknown function, DUF484 3 213 5.4E-33 T 22-04-2016 IPR007435 Protein of unknown function DUF484 SCD_RS01545 afae510584569a5d7ff1aed67a62b13b 216 PANTHER PTHR38765 1 213 8.0E-30 T 22-04-2016 SCD_RS01855 14f5421955216f09f19d22104eba881a 163 SUPERFAMILY SSF46785 7 70 6.72E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS01855 14f5421955216f09f19d22104eba881a 163 PANTHER PTHR30154 1 160 3.2E-46 T 22-04-2016 SCD_RS01855 14f5421955216f09f19d22104eba881a 163 Gene3D G3DSA:1.10.10.10 6 61 5.5E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS01855 14f5421955216f09f19d22104eba881a 163 PANTHER PTHR30154:SF27 1 160 3.2E-46 T 22-04-2016 SCD_RS01855 14f5421955216f09f19d22104eba881a 163 Pfam PF13404 AsnC-type helix-turn-helix domain 7 50 4.6E-8 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SCD_RS10910 95ad6f45f4b1b761166b8455cff0ef1b 211 PANTHER PTHR30353 1 209 5.0E-93 T 22-04-2016 IPR032818 DedA family SCD_RS10910 95ad6f45f4b1b761166b8455cff0ef1b 211 PANTHER PTHR30353:SF0 1 209 5.0E-93 T 22-04-2016 SCD_RS10910 95ad6f45f4b1b761166b8455cff0ef1b 211 Pfam PF09335 SNARE associated Golgi protein 49 174 6.6E-23 T 22-04-2016 IPR032816 SNARE associated Golgi protein SCD_RS14205 d497ff26730739f74bdd04a64d0297b3 353 Gene3D G3DSA:3.40.50.2000 6 161 6.1E-28 T 22-04-2016 SCD_RS14205 d497ff26730739f74bdd04a64d0297b3 353 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 78 313 4.4E-22 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 SCD_RS14205 d497ff26730739f74bdd04a64d0297b3 353 PANTHER PTHR30160:SF1 1 319 1.4E-52 T 22-04-2016 SCD_RS14205 d497ff26730739f74bdd04a64d0297b3 353 Gene3D G3DSA:3.40.50.2000 176 321 3.8E-30 T 22-04-2016 SCD_RS14205 d497ff26730739f74bdd04a64d0297b3 353 PANTHER PTHR30160 1 319 1.4E-52 T 22-04-2016 SCD_RS14205 d497ff26730739f74bdd04a64d0297b3 353 SUPERFAMILY SSF53756 5 340 2.04E-62 T 22-04-2016 SCD_RS12595 3cbe12c13b851189b47c2be1f74f633f 161 Gene3D G3DSA:3.40.30.10 7 158 8.6E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS12595 3cbe12c13b851189b47c2be1f74f633f 161 ProSitePatterns PS00194 Thioredoxin family active site. 45 63 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SCD_RS12595 3cbe12c13b851189b47c2be1f74f633f 161 SUPERFAMILY SSF52833 1 157 5.25E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS02795 dc2c7436f3149fb618e39a852e41f0e8 656 Pfam PF02254 TrkA-N domain 409 522 1.7E-24 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SCD_RS02795 dc2c7436f3149fb618e39a852e41f0e8 656 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 283 3.6E-74 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 SCD_RS02795 dc2c7436f3149fb618e39a852e41f0e8 656 PANTHER PTHR16254 8 563 3.9E-173 T 22-04-2016 SCD_RS02795 dc2c7436f3149fb618e39a852e41f0e8 656 SUPERFAMILY SSF51735 406 547 2.78E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS02795 dc2c7436f3149fb618e39a852e41f0e8 656 Gene3D G3DSA:3.30.70.1450 585 650 1.3E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SCD_RS02795 dc2c7436f3149fb618e39a852e41f0e8 656 SUPERFAMILY SSF116726 572 649 2.62E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SCD_RS02795 dc2c7436f3149fb618e39a852e41f0e8 656 Pfam PF00999 Sodium/hydrogen exchanger family 9 373 2.6E-67 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SCD_RS02795 dc2c7436f3149fb618e39a852e41f0e8 656 Pfam PF02080 TrkA-C domain 586 650 1.6E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SCD_RS02795 dc2c7436f3149fb618e39a852e41f0e8 656 PANTHER PTHR16254:SF6 8 563 3.9E-173 T 22-04-2016 SCD_RS02795 dc2c7436f3149fb618e39a852e41f0e8 656 Gene3D G3DSA:3.40.50.720 404 537 4.8E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS13945 f9057da1623aa58f05c80ab28ce8e288 125 Gene3D G3DSA:2.60.120.10 10 119 1.3E-24 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SCD_RS13945 f9057da1623aa58f05c80ab28ce8e288 125 PANTHER PTHR24353 14 96 2.9E-14 T 22-04-2016 SCD_RS13945 f9057da1623aa58f05c80ab28ce8e288 125 SMART SM00100 2 108 6.4E-10 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SCD_RS13945 f9057da1623aa58f05c80ab28ce8e288 125 Pfam PF00027 Cyclic nucleotide-binding domain 14 95 3.0E-16 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SCD_RS13945 f9057da1623aa58f05c80ab28ce8e288 125 SUPERFAMILY SSF51206 8 118 4.71E-24 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like SCD_RS07855 bb8147d4dcfe3cab6a7f022b1b62231a 465 Pfam PF13638 PIN domain 12 156 1.4E-39 T 22-04-2016 IPR002716 PIN domain SCD_RS07855 bb8147d4dcfe3cab6a7f022b1b62231a 465 PANTHER PTHR30473 9 184 6.6E-173 T 22-04-2016 SCD_RS07855 bb8147d4dcfe3cab6a7f022b1b62231a 465 PANTHER PTHR30473 203 465 6.6E-173 T 22-04-2016 SCD_RS07855 bb8147d4dcfe3cab6a7f022b1b62231a 465 PANTHER PTHR30473:SF2 9 184 6.6E-173 T 22-04-2016 SCD_RS07855 bb8147d4dcfe3cab6a7f022b1b62231a 465 PANTHER PTHR30473:SF2 203 465 6.6E-173 T 22-04-2016 SCD_RS07855 bb8147d4dcfe3cab6a7f022b1b62231a 465 SMART SM00670 10 144 9.1E-9 T 22-04-2016 IPR002716 PIN domain SCD_RS07855 bb8147d4dcfe3cab6a7f022b1b62231a 465 SUPERFAMILY SSF88723 107 159 1.18E-10 T 22-04-2016 IPR029060 PIN domain-like SCD_RS07855 bb8147d4dcfe3cab6a7f022b1b62231a 465 SUPERFAMILY SSF88723 11 71 1.18E-10 T 22-04-2016 IPR029060 PIN domain-like SCD_RS07855 bb8147d4dcfe3cab6a7f022b1b62231a 465 Gene3D G3DSA:3.40.50.1010 12 70 7.3E-9 T 22-04-2016 IPR029060 PIN domain-like SCD_RS07855 bb8147d4dcfe3cab6a7f022b1b62231a 465 Gene3D G3DSA:3.40.50.1010 107 163 7.3E-9 T 22-04-2016 IPR029060 PIN domain-like SCD_RS07855 bb8147d4dcfe3cab6a7f022b1b62231a 465 Pfam PF02562 PhoH-like protein 252 452 1.4E-52 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 SCD_RS07855 bb8147d4dcfe3cab6a7f022b1b62231a 465 Gene3D G3DSA:3.40.50.300 249 464 2.1E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07855 bb8147d4dcfe3cab6a7f022b1b62231a 465 SUPERFAMILY SSF52540 138 188 2.41E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07855 bb8147d4dcfe3cab6a7f022b1b62231a 465 SUPERFAMILY SSF52540 251 445 2.41E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS06745 1487563f1ff25a5489c546ba1e6e53f5 184 SUPERFAMILY SSF52980 4 178 9.12E-75 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SCD_RS06745 1487563f1ff25a5489c546ba1e6e53f5 184 PANTHER PTHR38784 1 182 2.9E-81 T 22-04-2016 SCD_RS06745 1487563f1ff25a5489c546ba1e6e53f5 184 PANTHER PTHR38784:SF1 1 182 2.9E-81 T 22-04-2016 SCD_RS06745 1487563f1ff25a5489c546ba1e6e53f5 184 PIRSF PIRSF011484 1 180 8.0E-76 T 22-04-2016 IPR009822 YaeQ SCD_RS06745 1487563f1ff25a5489c546ba1e6e53f5 184 SMART SM01322 1 176 6.7E-121 T 22-04-2016 IPR009822 YaeQ SCD_RS06745 1487563f1ff25a5489c546ba1e6e53f5 184 Pfam PF07152 YaeQ protein 1 173 7.7E-81 T 22-04-2016 IPR009822 YaeQ SCD_RS06745 1487563f1ff25a5489c546ba1e6e53f5 184 Gene3D G3DSA:3.10.640.10 1 179 7.1E-84 T 22-04-2016 SCD_RS11880 ff5d91bbec360b7696a22720b01091cb 276 Pfam PF01061 ABC-2 type transporter 29 235 6.8E-23 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 SCD_RS11880 ff5d91bbec360b7696a22720b01091cb 276 PANTHER PTHR30413:SF8 3 276 2.2E-108 T 22-04-2016 SCD_RS11880 ff5d91bbec360b7696a22720b01091cb 276 PANTHER PTHR30413 3 276 2.2E-108 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SCD_RS00910 125c884403dcc6c999ae3e0cba4a9c66 213 PANTHER PTHR37298 11 213 1.4E-25 T 22-04-2016 SCD_RS00910 125c884403dcc6c999ae3e0cba4a9c66 213 Pfam PF01865 Protein of unknown function DUF47 22 210 1.1E-11 T 22-04-2016 IPR018445 Putative phosphate transport regulator SCD_RS09465 0bfe6ebde3963b12e999ecbf75c69c43 422 Pfam PF02321 Outer membrane efflux protein 232 401 3.9E-12 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SCD_RS09465 0bfe6ebde3963b12e999ecbf75c69c43 422 Pfam PF02321 Outer membrane efflux protein 33 205 8.1E-5 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SCD_RS09465 0bfe6ebde3963b12e999ecbf75c69c43 422 SUPERFAMILY SSF56954 5 409 1.7E-37 T 22-04-2016 SCD_RS09465 0bfe6ebde3963b12e999ecbf75c69c43 422 PANTHER PTHR30203 32 401 3.2E-17 T 22-04-2016 SCD_RS09465 0bfe6ebde3963b12e999ecbf75c69c43 422 Gene3D G3DSA:1.20.1600.10 32 401 2.0E-22 T 22-04-2016 SCD_RS00925 e12211cd6ed87b41fc768e810b6be296 142 Gene3D G3DSA:3.10.450.50 29 125 6.8E-9 T 22-04-2016 IPR032710 NTF2-like domain SCD_RS00925 e12211cd6ed87b41fc768e810b6be296 142 SUPERFAMILY SSF54427 28 126 3.26E-9 T 22-04-2016 IPR032710 NTF2-like domain SCD_RS12710 739ae7445565525a528b4bf74be87e23 92 PANTHER PTHR34477 1 79 1.9E-30 T 22-04-2016 SCD_RS12710 739ae7445565525a528b4bf74be87e23 92 SUPERFAMILY SSF82771 4 74 7.85E-13 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SCD_RS12710 739ae7445565525a528b4bf74be87e23 92 Pfam PF01541 GIY-YIG catalytic domain 4 73 1.1E-13 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SCD_RS12710 739ae7445565525a528b4bf74be87e23 92 PANTHER PTHR34477:SF1 1 79 1.9E-30 T 22-04-2016 SCD_RS06455 392b0d94e11817d1a26aa3a7c1120ea6 427 Gene3D G3DSA:1.25.40.10 23 95 7.9E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS06455 392b0d94e11817d1a26aa3a7c1120ea6 427 SUPERFAMILY SSF48452 27 96 1.14E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS04365 e98722706c9a9d0da4c440857dab841a 222 Pfam PF02361 Cobalt transport protein 17 141 3.7E-8 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component SCD_RS03535 933cd593af757ee77d30d315865410b6 98 Pfam PF08895 Domain of unknown function (DUF1840) 1 97 2.0E-30 T 22-04-2016 IPR014991 Protein of unknown function DUF1840 SCD_RS11275 f48930ae6eb0587c57e1af7bd997829f 246 PANTHER PTHR13939 2 208 8.1E-34 T 22-04-2016 SCD_RS11275 f48930ae6eb0587c57e1af7bd997829f 246 SUPERFAMILY SSF53218 2 199 1.83E-32 T 22-04-2016 IPR001453 MoaB/Mog domain SCD_RS11275 f48930ae6eb0587c57e1af7bd997829f 246 SMART SM00852 5 165 1.2E-32 T 22-04-2016 IPR001453 MoaB/Mog domain SCD_RS11275 f48930ae6eb0587c57e1af7bd997829f 246 Gene3D G3DSA:3.40.980.10 2 162 2.1E-29 T 22-04-2016 IPR001453 MoaB/Mog domain SCD_RS11275 f48930ae6eb0587c57e1af7bd997829f 246 Pfam PF00994 Probable molybdopterin binding domain 6 159 1.4E-27 T 22-04-2016 IPR001453 MoaB/Mog domain SCD_RS00300 843268d956432baa39b0f1f9674d2ab0 122 SUPERFAMILY SSF81301 2 111 2.13E-39 T 22-04-2016 SCD_RS00300 843268d956432baa39b0f1f9674d2ab0 122 Gene3D G3DSA:3.30.460.10 3 105 2.9E-39 T 22-04-2016 SCD_RS00300 843268d956432baa39b0f1f9674d2ab0 122 PANTHER PTHR21043 1 108 2.8E-43 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SCD_RS00300 843268d956432baa39b0f1f9674d2ab0 122 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 25.27 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SCD_RS00300 843268d956432baa39b0f1f9674d2ab0 122 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 2.6E-38 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SCD_RS00300 843268d956432baa39b0f1f9674d2ab0 122 Pfam PF02410 Ribosomal silencing factor during starvation 9 104 2.7E-29 T 22-04-2016 SCD_RS09925 6af940e182de3ee3e88745d4209d975e 536 PANTHER PTHR10010 10 456 8.9E-62 T 22-04-2016 SCD_RS09925 6af940e182de3ee3e88745d4209d975e 536 SUPERFAMILY SSF109755 330 466 4.19E-7 T 22-04-2016 SCD_RS09925 6af940e182de3ee3e88745d4209d975e 536 PANTHER PTHR10010:SF26 10 456 8.9E-62 T 22-04-2016 SCD_RS09925 6af940e182de3ee3e88745d4209d975e 536 Pfam PF02690 Na+/Pi-cotransporter 16 156 9.0E-44 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 SCD_RS09925 6af940e182de3ee3e88745d4209d975e 536 Pfam PF02690 Na+/Pi-cotransporter 176 256 4.4E-12 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 SCD_RS03255 c2c318380c80ae63a9db3f8f3b344154 535 PANTHER PTHR10617 469 534 1.2E-173 T 22-04-2016 SCD_RS03255 c2c318380c80ae63a9db3f8f3b344154 535 PANTHER PTHR10617 72 389 1.2E-173 T 22-04-2016 SCD_RS03255 c2c318380c80ae63a9db3f8f3b344154 535 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 100 268 3.1E-6 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS03255 c2c318380c80ae63a9db3f8f3b344154 535 SUPERFAMILY SSF51905 478 527 6.88E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS03255 c2c318380c80ae63a9db3f8f3b344154 535 SUPERFAMILY SSF51905 100 286 6.88E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS03255 c2c318380c80ae63a9db3f8f3b344154 535 Gene3D G3DSA:3.50.50.60 100 288 1.5E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS03255 c2c318380c80ae63a9db3f8f3b344154 535 Gene3D G3DSA:3.50.50.60 472 528 1.5E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SCD_RS03255 c2c318380c80ae63a9db3f8f3b344154 535 PIRSF PIRSF038984 1 534 5.0E-245 T 22-04-2016 IPR028348 FAD dependent protein SCD_RS03255 c2c318380c80ae63a9db3f8f3b344154 535 PANTHER PTHR10617:SF52 469 534 1.2E-173 T 22-04-2016 SCD_RS03255 c2c318380c80ae63a9db3f8f3b344154 535 PANTHER PTHR10617:SF52 72 389 1.2E-173 T 22-04-2016 SCD_RS04785 eade2632174096cd40a405a982207af0 328 SUPERFAMILY SSF52091 33 89 6.28E-6 T 22-04-2016 IPR002645 STAS domain SCD_RS04785 eade2632174096cd40a405a982207af0 328 Gene3D G3DSA:3.30.565.10 155 272 1.2E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS04785 eade2632174096cd40a405a982207af0 328 SUPERFAMILY SSF55874 156 271 4.71E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS04785 eade2632174096cd40a405a982207af0 328 Gene3D G3DSA:3.30.750.24 35 89 7.1E-5 T 22-04-2016 IPR002645 STAS domain SCD_RS00450 856741eb4d2a1582094d4842415bd6f8 259 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 SCD_RS00450 856741eb4d2a1582094d4842415bd6f8 259 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 255 2.2E-76 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 SCD_RS00450 856741eb4d2a1582094d4842415bd6f8 259 Gene3D G3DSA:3.60.10.10 1 256 3.6E-94 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SCD_RS00450 856741eb4d2a1582094d4842415bd6f8 259 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 248 1.0E-23 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SCD_RS00450 856741eb4d2a1582094d4842415bd6f8 259 PANTHER PTHR22748 1 259 2.3E-102 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 SCD_RS00450 856741eb4d2a1582094d4842415bd6f8 259 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 253 2.9E-69 T 22-04-2016 SCD_RS00450 856741eb4d2a1582094d4842415bd6f8 259 SUPERFAMILY SSF56219 1 256 2.09E-75 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SCD_RS05630 722b60c29d6c28e1c1e98d9f614cda96 496 Gene3D G3DSA:3.30.43.10 11 106 1.3E-27 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SCD_RS05630 722b60c29d6c28e1c1e98d9f614cda96 496 SUPERFAMILY SSF56176 16 228 2.57E-66 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SCD_RS05630 722b60c29d6c28e1c1e98d9f614cda96 496 PANTHER PTHR11748 15 484 6.5E-200 T 22-04-2016 SCD_RS05630 722b60c29d6c28e1c1e98d9f614cda96 496 Pfam PF01565 FAD binding domain 53 191 4.8E-40 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SCD_RS05630 722b60c29d6c28e1c1e98d9f614cda96 496 PANTHER PTHR11748:SF78 15 484 6.5E-200 T 22-04-2016 SCD_RS05630 722b60c29d6c28e1c1e98d9f614cda96 496 Gene3D G3DSA:3.30.465.10 108 228 2.9E-32 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SCD_RS05630 722b60c29d6c28e1c1e98d9f614cda96 496 Pfam PF02913 FAD linked oxidases, C-terminal domain 228 467 1.2E-67 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 SCD_RS05630 722b60c29d6c28e1c1e98d9f614cda96 496 Gene3D G3DSA:1.10.45.10 429 468 7.8E-9 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 SCD_RS05630 722b60c29d6c28e1c1e98d9f614cda96 496 SUPERFAMILY SSF55103 201 470 9.81E-77 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 SCD_RS14110 fd243fbb587b62e02a6882cac7a4ef1c 372 Hamap MF_01976 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 4 371 41.852 T 22-04-2016 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 SCD_RS14110 fd243fbb587b62e02a6882cac7a4ef1c 372 Gene3D G3DSA:3.40.50.450 4 221 1.1E-68 T 22-04-2016 SCD_RS14110 fd243fbb587b62e02a6882cac7a4ef1c 372 PIRSF PIRSF000532 2 372 2.7E-117 T 22-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 SCD_RS14110 fd243fbb587b62e02a6882cac7a4ef1c 372 PANTHER PTHR13697 4 239 9.7E-105 T 22-04-2016 SCD_RS14110 fd243fbb587b62e02a6882cac7a4ef1c 372 PANTHER PTHR13697 274 359 9.7E-105 T 22-04-2016 SCD_RS14110 fd243fbb587b62e02a6882cac7a4ef1c 372 ProSitePatterns PS00433 Phosphofructokinase signature. 290 308 - T 22-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14110 fd243fbb587b62e02a6882cac7a4ef1c 372 SUPERFAMILY SSF53784 4 363 1.44E-111 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14110 fd243fbb587b62e02a6882cac7a4ef1c 372 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 34 47 4.2E-55 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14110 fd243fbb587b62e02a6882cac7a4ef1c 372 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 221 233 4.2E-55 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14110 fd243fbb587b62e02a6882cac7a4ef1c 372 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 167 183 4.2E-55 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14110 fd243fbb587b62e02a6882cac7a4ef1c 372 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 129 146 4.2E-55 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14110 fd243fbb587b62e02a6882cac7a4ef1c 372 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 185 202 4.2E-55 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14110 fd243fbb587b62e02a6882cac7a4ef1c 372 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 8 27 4.2E-55 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14110 fd243fbb587b62e02a6882cac7a4ef1c 372 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 102 118 4.2E-55 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14110 fd243fbb587b62e02a6882cac7a4ef1c 372 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 147 165 4.2E-55 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS14110 fd243fbb587b62e02a6882cac7a4ef1c 372 Pfam PF00365 Phosphofructokinase 6 322 1.2E-95 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SCD_RS12760 a04fbbc363fcc7c20cec2a24246b74bc 237 Pfam PF04654 Protein of unknown function, DUF599 15 216 5.2E-62 T 22-04-2016 IPR006747 Protein of unknown function DUF599 SCD_RS12760 a04fbbc363fcc7c20cec2a24246b74bc 237 PANTHER PTHR31881 3 220 3.3E-39 T 22-04-2016 SCD_RS09700 207e465e0692f91d4a9122faba527857 65 Gene3D G3DSA:2.60.260.40 5 65 1.4E-20 T 22-04-2016 IPR019401 Zinc finger, CHCC-type SCD_RS09700 207e465e0692f91d4a9122faba527857 65 Pfam PF10276 Zinc-finger domain 31 54 2.0E-8 T 22-04-2016 IPR019401 Zinc finger, CHCC-type SCD_RS07105 31e8fb94e8ce4e586a1d66fb83d61159 241 Pfam PF00072 Response regulator receiver domain 7 116 7.5E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS07105 31e8fb94e8ce4e586a1d66fb83d61159 241 Gene3D G3DSA:1.10.10.10 136 235 1.3E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS07105 31e8fb94e8ce4e586a1d66fb83d61159 241 SMART SM00448 5 115 8.2E-41 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS07105 31e8fb94e8ce4e586a1d66fb83d61159 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 232 7.3E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SCD_RS07105 31e8fb94e8ce4e586a1d66fb83d61159 241 SMART SM00862 156 232 1.4E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SCD_RS07105 31e8fb94e8ce4e586a1d66fb83d61159 241 PANTHER PTHR26402:SF528 5 236 2.3E-100 T 22-04-2016 SCD_RS07105 31e8fb94e8ce4e586a1d66fb83d61159 241 SUPERFAMILY SSF52172 3 135 5.83E-42 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS07105 31e8fb94e8ce4e586a1d66fb83d61159 241 PANTHER PTHR26402 5 236 2.3E-100 T 22-04-2016 SCD_RS07105 31e8fb94e8ce4e586a1d66fb83d61159 241 Gene3D G3DSA:3.40.50.2300 4 128 1.5E-41 T 22-04-2016 SCD_RS07105 31e8fb94e8ce4e586a1d66fb83d61159 241 SUPERFAMILY SSF46894 137 233 3.4E-25 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SCD_RS02030 05937d2f8cab2027e72262d330cab00d 402 Pfam PF02687 FtsX-like permease family 282 395 2.5E-19 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SCD_RS02030 05937d2f8cab2027e72262d330cab00d 402 PANTHER PTHR30572 1 402 1.5E-66 T 22-04-2016 SCD_RS02030 05937d2f8cab2027e72262d330cab00d 402 Pfam PF12704 MacB-like periplasmic core domain 21 244 5.0E-32 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SCD_RS12235 5e01abcaabeee666d1d14c58216ffef5 304 Pfam PF01551 Peptidase family M23 203 297 2.2E-32 T 22-04-2016 IPR016047 Peptidase M23 SCD_RS12235 5e01abcaabeee666d1d14c58216ffef5 304 SUPERFAMILY SSF51261 172 301 1.57E-55 T 22-04-2016 IPR011055 Duplicated hybrid motif SCD_RS12235 5e01abcaabeee666d1d14c58216ffef5 304 PANTHER PTHR21666 184 301 6.9E-44 T 22-04-2016 SCD_RS12235 5e01abcaabeee666d1d14c58216ffef5 304 Gene3D G3DSA:2.70.70.10 163 301 9.9E-48 T 22-04-2016 SCD_RS13155 25c8a28db747122893c4485d1b0f8374 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 387 406 6.4E-112 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS13155 25c8a28db747122893c4485d1b0f8374 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 254 275 6.4E-112 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS13155 25c8a28db747122893c4485d1b0f8374 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 300 315 6.4E-112 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS13155 25c8a28db747122893c4485d1b0f8374 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 437 458 6.4E-112 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS13155 25c8a28db747122893c4485d1b0f8374 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 121 6.4E-112 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS13155 25c8a28db747122893c4485d1b0f8374 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 23 48 6.4E-112 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS13155 25c8a28db747122893c4485d1b0f8374 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 345 6.4E-112 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS13155 25c8a28db747122893c4485d1b0f8374 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 203 222 6.4E-112 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS13155 25c8a28db747122893c4485d1b0f8374 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 174 192 6.4E-112 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS13155 25c8a28db747122893c4485d1b0f8374 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 70 93 6.4E-112 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS13155 25c8a28db747122893c4485d1b0f8374 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 359 377 6.4E-112 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS13155 25c8a28db747122893c4485d1b0f8374 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 145 157 6.4E-112 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS13155 25c8a28db747122893c4485d1b0f8374 532 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 256 310 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS13155 25c8a28db747122893c4485d1b0f8374 532 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 32 478 4.4E-139 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS13155 25c8a28db747122893c4485d1b0f8374 532 SUPERFAMILY SSF81442 20 531 2.22E-181 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS13155 25c8a28db747122893c4485d1b0f8374 532 PANTHER PTHR10422 9 532 9.3E-302 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS13155 25c8a28db747122893c4485d1b0f8374 532 PANTHER PTHR10422:SF27 9 532 9.3E-302 T 22-04-2016 SCD_RS13155 25c8a28db747122893c4485d1b0f8374 532 Gene3D G3DSA:1.20.210.10 11 531 7.2E-201 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS03210 112e0d094449f536fd31048134566b53 72 PANTHER PTHR33370 1 72 1.5E-47 T 22-04-2016 SCD_RS03210 112e0d094449f536fd31048134566b53 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.2E-36 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SCD_RS03210 112e0d094449f536fd31048134566b53 72 SUPERFAMILY SSF50249 1 70 1.03E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS03210 112e0d094449f536fd31048134566b53 72 SMART SM00316 4 72 2.9E-4 T 22-04-2016 IPR022967 RNA-binding domain, S1 SCD_RS03210 112e0d094449f536fd31048134566b53 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 4.5E-26 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 SCD_RS03210 112e0d094449f536fd31048134566b53 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.024 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SCD_RS03210 112e0d094449f536fd31048134566b53 72 Gene3D G3DSA:2.40.50.140 1 72 5.0E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS04445 6341fe868646ec44b6304ff7e685a116 163 PIRSF PIRSF001467 1 163 5.4E-28 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SCD_RS04445 6341fe868646ec44b6304ff7e685a116 163 PANTHER PTHR11071:SF192 1 163 1.1E-66 T 22-04-2016 SCD_RS04445 6341fe868646ec44b6304ff7e685a116 163 SUPERFAMILY SSF50891 1 162 3.07E-57 T 22-04-2016 IPR029000 Cyclophilin-like domain SCD_RS04445 6341fe868646ec44b6304ff7e685a116 163 PANTHER PTHR11071 1 163 1.1E-66 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SCD_RS04445 6341fe868646ec44b6304ff7e685a116 163 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 SCD_RS04445 6341fe868646ec44b6304ff7e685a116 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 4.0E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SCD_RS04445 6341fe868646ec44b6304ff7e685a116 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 4.0E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SCD_RS04445 6341fe868646ec44b6304ff7e685a116 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 4.0E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SCD_RS04445 6341fe868646ec44b6304ff7e685a116 163 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 162 3.2E-48 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SCD_RS04445 6341fe868646ec44b6304ff7e685a116 163 Gene3D G3DSA:2.40.100.10 2 162 1.4E-52 T 22-04-2016 IPR029000 Cyclophilin-like domain SCD_RS07805 c671e014b593efb95ed8dc874e6bcd58 208 SUPERFAMILY SSF52266 27 203 4.58E-46 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SCD_RS07805 c671e014b593efb95ed8dc874e6bcd58 208 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 29 188 5.3E-23 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SCD_RS07805 c671e014b593efb95ed8dc874e6bcd58 208 PANTHER PTHR30383 1 206 2.4E-40 T 22-04-2016 SCD_RS07805 c671e014b593efb95ed8dc874e6bcd58 208 Gene3D G3DSA:3.40.50.1110 27 204 2.3E-51 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SCD_RS10300 f88e9d993c39975f2615abcf608d4616 1047 SUPERFAMILY SSF56601 730 1001 6.72E-28 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS10300 f88e9d993c39975f2615abcf608d4616 1047 SUPERFAMILY SSF56601 883 940 5.32E-8 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS10300 f88e9d993c39975f2615abcf608d4616 1047 SUPERFAMILY SSF56601 588 653 5.32E-8 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS10300 f88e9d993c39975f2615abcf608d4616 1047 SUPERFAMILY SSF56601 457 538 5.32E-8 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS10300 f88e9d993c39975f2615abcf608d4616 1047 SUPERFAMILY SSF56601 681 698 5.32E-8 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS10300 f88e9d993c39975f2615abcf608d4616 1047 Pfam PF00905 Penicillin binding protein transpeptidase domain 826 932 6.9E-7 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SCD_RS10300 f88e9d993c39975f2615abcf608d4616 1047 Gene3D G3DSA:3.40.710.10 827 1026 3.8E-41 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS10300 f88e9d993c39975f2615abcf608d4616 1047 Gene3D G3DSA:3.40.710.10 562 658 3.8E-41 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS10300 f88e9d993c39975f2615abcf608d4616 1047 Gene3D G3DSA:3.40.710.10 357 514 3.8E-41 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SCD_RS10300 f88e9d993c39975f2615abcf608d4616 1047 Gene3D G3DSA:1.10.3810.10 152 298 2.0E-4 T 22-04-2016 SCD_RS10300 f88e9d993c39975f2615abcf608d4616 1047 SUPERFAMILY SSF53955 149 299 1.32E-7 T 22-04-2016 IPR023346 Lysozyme-like domain SCD_RS10300 f88e9d993c39975f2615abcf608d4616 1047 Pfam PF00912 Transglycosylase 147 353 3.4E-20 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SCD_RS06815 a11181323657a4e9e3cea2977945bcab 63 Pfam PF13711 Domain of unknown function (DUF4160) 1 59 2.2E-14 T 22-04-2016 IPR025427 Protein of unknown function DUF4160 SCD_RS14500 b1ca330146c7053fce697cf1f759c289 348 PANTHER PTHR13779 25 190 3.1E-42 T 22-04-2016 SCD_RS14500 b1ca330146c7053fce697cf1f759c289 348 PANTHER PTHR13779:SF23 25 190 3.1E-42 T 22-04-2016 SCD_RS14500 b1ca330146c7053fce697cf1f759c289 348 SUPERFAMILY SSF52540 21 160 4.5E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14500 b1ca330146c7053fce697cf1f759c289 348 Gene3D G3DSA:3.40.50.300 9 160 1.2E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14500 b1ca330146c7053fce697cf1f759c289 348 Pfam PF07728 AAA domain (dynein-related subfamily) 24 120 3.9E-9 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 SCD_RS14500 b1ca330146c7053fce697cf1f759c289 348 SMART SM00382 21 164 9.0E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS02390 bbb5c797a23348e5ef0007e3a4f28094 631 Pfam PF00571 CBS domain 172 223 7.7E-10 T 22-04-2016 IPR000644 CBS domain SCD_RS02390 bbb5c797a23348e5ef0007e3a4f28094 631 Pfam PF00571 CBS domain 237 287 2.0E-9 T 22-04-2016 IPR000644 CBS domain SCD_RS02390 bbb5c797a23348e5ef0007e3a4f28094 631 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 490 629 3.3E-42 T 22-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding SCD_RS02390 bbb5c797a23348e5ef0007e3a4f28094 631 PANTHER PTHR11911 169 285 1.8E-24 T 22-04-2016 SCD_RS02390 bbb5c797a23348e5ef0007e3a4f28094 631 Pfam PF03445 Putative nucleotidyltransferase DUF294 314 451 1.0E-48 T 22-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 SCD_RS02390 bbb5c797a23348e5ef0007e3a4f28094 631 Gene3D G3DSA:3.10.580.10 170 285 3.8E-27 T 22-04-2016 SCD_RS02390 bbb5c797a23348e5ef0007e3a4f28094 631 SUPERFAMILY SSF51206 15 143 2.49E-15 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like SCD_RS02390 bbb5c797a23348e5ef0007e3a4f28094 631 SUPERFAMILY SSF54631 171 286 1.07E-27 T 22-04-2016 SCD_RS02390 bbb5c797a23348e5ef0007e3a4f28094 631 SMART SM00116 242 289 4.0E-6 T 22-04-2016 IPR000644 CBS domain SCD_RS02390 bbb5c797a23348e5ef0007e3a4f28094 631 SMART SM00116 177 225 4.2E-7 T 22-04-2016 IPR000644 CBS domain SCD_RS02390 bbb5c797a23348e5ef0007e3a4f28094 631 Gene3D G3DSA:2.60.120.10 16 153 9.7E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SCD_RS01930 84bdf58773fcdee303490a95ec88fa05 496 SUPERFAMILY SSF109604 308 491 7.22E-45 T 22-04-2016 SCD_RS01930 84bdf58773fcdee303490a95ec88fa05 496 PANTHER PTHR30005 1 496 9.4E-161 T 22-04-2016 SCD_RS01930 84bdf58773fcdee303490a95ec88fa05 496 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 7 301 1.7E-97 T 22-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 SCD_RS01930 84bdf58773fcdee303490a95ec88fa05 496 SUPERFAMILY SSF53067 7 128 5.18E-34 T 22-04-2016 SCD_RS01930 84bdf58773fcdee303490a95ec88fa05 496 PIRSF PIRSF001267 1 494 1.2E-192 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 SCD_RS01930 84bdf58773fcdee303490a95ec88fa05 496 Gene3D G3DSA:3.30.420.40 3 126 3.1E-40 T 22-04-2016 SCD_RS01930 84bdf58773fcdee303490a95ec88fa05 496 SUPERFAMILY SSF53067 132 306 5.83E-42 T 22-04-2016 SCD_RS01930 84bdf58773fcdee303490a95ec88fa05 496 Pfam PF02541 Ppx/GppA phosphatase family 21 303 1.6E-70 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 SCD_RS01930 84bdf58773fcdee303490a95ec88fa05 496 PANTHER PTHR30005:SF4 1 496 9.4E-161 T 22-04-2016 SCD_RS01930 84bdf58773fcdee303490a95ec88fa05 496 Gene3D G3DSA:3.30.420.150 128 305 3.4E-50 T 22-04-2016 SCD_RS09605 e299c2bdcdb68d56572e2f0ad51ade14 130 Gene3D G3DSA:3.10.450.50 6 127 1.1E-43 T 22-04-2016 IPR032710 NTF2-like domain SCD_RS09605 e299c2bdcdb68d56572e2f0ad51ade14 130 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 3 126 27.922 T 22-04-2016 IPR023006 Uncharacterised protein family UPF0225 SCD_RS09605 e299c2bdcdb68d56572e2f0ad51ade14 130 SUPERFAMILY SSF54427 27 127 5.19E-35 T 22-04-2016 IPR032710 NTF2-like domain SCD_RS09440 16c1a5edc4e0f1570171d2d539e608bc 268 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 255 1.3E-72 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS09440 16c1a5edc4e0f1570171d2d539e608bc 268 Gene3D G3DSA:3.40.50.1860 6 176 1.2E-54 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS09440 16c1a5edc4e0f1570171d2d539e608bc 268 PANTHER PTHR21198 1 267 1.9E-103 T 22-04-2016 SCD_RS09440 16c1a5edc4e0f1570171d2d539e608bc 268 SUPERFAMILY SSF53681 113 266 2.22E-43 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS09440 16c1a5edc4e0f1570171d2d539e608bc 268 PANTHER PTHR21198:SF2 1 267 1.9E-103 T 22-04-2016 SCD_RS09440 16c1a5edc4e0f1570171d2d539e608bc 268 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 183 193 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS09440 16c1a5edc4e0f1570171d2d539e608bc 268 Pfam PF01177 Asp/Glu/Hydantoin racemase 9 218 6.5E-36 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS09440 16c1a5edc4e0f1570171d2d539e608bc 268 SUPERFAMILY SSF53681 8 108 9.59E-33 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS09440 16c1a5edc4e0f1570171d2d539e608bc 268 Hamap MF_00258 Glutamate racemase [murI]. 7 259 36.694 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SCD_RS09920 cd3e04ec48238b0196fa115a491041f5 108 Pfam PF03334 Na+/H+ antiporter subunit 12 92 6.6E-28 T 22-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 SCD_RS09920 cd3e04ec48238b0196fa115a491041f5 108 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 12 99 2.0E-30 T 22-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 SCD_RS09225 3e51c8cb36787755492091acd63fdeda 407 Gene3D G3DSA:1.10.287.950 159 377 1.1E-47 T 22-04-2016 SCD_RS09225 3e51c8cb36787755492091acd63fdeda 407 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 320 349 8.1E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SCD_RS09225 3e51c8cb36787755492091acd63fdeda 407 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 166 195 8.1E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SCD_RS09225 3e51c8cb36787755492091acd63fdeda 407 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 272 301 8.1E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SCD_RS09225 3e51c8cb36787755492091acd63fdeda 407 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 243 270 8.1E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SCD_RS09225 3e51c8cb36787755492091acd63fdeda 407 SMART SM00304 78 130 1.7E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS09225 3e51c8cb36787755492091acd63fdeda 407 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 203 405 3.7E-43 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SCD_RS09225 3e51c8cb36787755492091acd63fdeda 407 SMART SM00283 145 406 4.6E-53 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SCD_RS09225 3e51c8cb36787755492091acd63fdeda 407 SUPERFAMILY SSF58104 98 407 1.14E-63 T 22-04-2016 SCD_RS09225 3e51c8cb36787755492091acd63fdeda 407 PANTHER PTHR32089 10 407 3.7E-86 T 22-04-2016 SCD_RS09225 3e51c8cb36787755492091acd63fdeda 407 Pfam PF00672 HAMP domain 59 125 8.1E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SCD_RS14280 692080e1b7e682244a1cfd7e0e96c61b 139 Pfam PF04138 GtrA-like protein 14 127 1.6E-16 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 SCD_RS09955 b3c4db8f77a4a79ae0c83c54a0a712d9 153 Pfam PF09828 Chromate resistance exported protein 3 136 3.3E-52 T 22-04-2016 IPR018634 Chromate resistance exported protein SCD_RS07485 b80fcf431b8bcf7a0e013ab4f4dc8eb7 108 Pfam PF02575 YbaB/EbfC DNA-binding family 10 98 1.5E-33 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SCD_RS07485 b80fcf431b8bcf7a0e013ab4f4dc8eb7 108 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 97 22.861 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SCD_RS07485 b80fcf431b8bcf7a0e013ab4f4dc8eb7 108 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 104 6.2E-33 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SCD_RS07485 b80fcf431b8bcf7a0e013ab4f4dc8eb7 108 PIRSF PIRSF004555 3 108 3.8E-37 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SCD_RS07485 b80fcf431b8bcf7a0e013ab4f4dc8eb7 108 Gene3D G3DSA:3.30.1310.10 3 108 1.7E-48 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SCD_RS07485 b80fcf431b8bcf7a0e013ab4f4dc8eb7 108 PANTHER PTHR33449 3 108 7.1E-49 T 22-04-2016 SCD_RS07485 b80fcf431b8bcf7a0e013ab4f4dc8eb7 108 PANTHER PTHR33449:SF1 3 108 7.1E-49 T 22-04-2016 SCD_RS07485 b80fcf431b8bcf7a0e013ab4f4dc8eb7 108 SUPERFAMILY SSF82607 10 102 4.58E-36 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SCD_RS05860 9abe8ff8cba869eca07d6cf83218783b 253 TIGRFAM TIGR03370 VPLPA-CTERM: VPLPA-CTERM protein sorting domain 227 251 1.5E-7 T 22-04-2016 IPR022472 VPLPA-CTERM protein sorting domain SCD_RS13705 9cfe238561fdb5677398c8b3444d5636 161 PANTHER PTHR40942:SF1 36 161 4.7E-36 T 22-04-2016 SCD_RS13705 9cfe238561fdb5677398c8b3444d5636 161 Gene3D G3DSA:1.10.760.10 78 157 7.2E-30 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS13705 9cfe238561fdb5677398c8b3444d5636 161 SUPERFAMILY SSF46626 78 159 2.04E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS13705 9cfe238561fdb5677398c8b3444d5636 161 PANTHER PTHR40942 36 161 4.7E-36 T 22-04-2016 SCD_RS13705 9cfe238561fdb5677398c8b3444d5636 161 PRINTS PR00607 Class IE cytochrome C signature 146 157 2.2E-12 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 SCD_RS13705 9cfe238561fdb5677398c8b3444d5636 161 PRINTS PR00607 Class IE cytochrome C signature 131 143 2.2E-12 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 SCD_RS13705 9cfe238561fdb5677398c8b3444d5636 161 PRINTS PR00607 Class IE cytochrome C signature 99 109 2.2E-12 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 SCD_RS13705 9cfe238561fdb5677398c8b3444d5636 161 PRINTS PR00607 Class IE cytochrome C signature 88 99 2.2E-12 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 SCD_RS13705 9cfe238561fdb5677398c8b3444d5636 161 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 80 156 9.6E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS10345 28ac3c593d4c711bb91a893ab90d18d9 662 PANTHER PTHR12411:SF101 50 232 1.4E-16 T 22-04-2016 IPR033158 Cathepsin W GO:0006508|GO:0008234 SCD_RS10345 28ac3c593d4c711bb91a893ab90d18d9 662 SUPERFAMILY SSF54001 28 250 1.16E-27 T 22-04-2016 SCD_RS10345 28ac3c593d4c711bb91a893ab90d18d9 662 Pfam PF00112 Papain family cysteine protease 49 236 9.9E-9 T 22-04-2016 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 SCD_RS10345 28ac3c593d4c711bb91a893ab90d18d9 662 Gene3D G3DSA:3.90.70.10 32 239 2.5E-23 T 22-04-2016 SCD_RS10345 28ac3c593d4c711bb91a893ab90d18d9 662 PANTHER PTHR12411 50 232 1.4E-16 T 22-04-2016 IPR013128 Peptidase C1A GO:0008234 SCD_RS12565 5a64d7807c67121e4a97658161dab1c2 218 PANTHER PTHR30625 9 207 2.0E-49 T 22-04-2016 SCD_RS12565 5a64d7807c67121e4a97658161dab1c2 218 PANTHER PTHR30625:SF3 9 207 2.0E-49 T 22-04-2016 SCD_RS12565 5a64d7807c67121e4a97658161dab1c2 218 Pfam PF01618 MotA/TolQ/ExbB proton channel family 88 200 7.8E-38 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SCD_RS13545 a1e9b5b757bb62c7aed126421f914870 248 Pfam PF01578 Cytochrome C assembly protein 31 186 5.6E-27 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SCD_RS13545 a1e9b5b757bb62c7aed126421f914870 248 PANTHER PTHR30071 23 226 1.8E-58 T 22-04-2016 SCD_RS13545 a1e9b5b757bb62c7aed126421f914870 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 158 184 6.4E-45 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13545 a1e9b5b757bb62c7aed126421f914870 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 64 84 6.4E-45 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13545 a1e9b5b757bb62c7aed126421f914870 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 47 64 6.4E-45 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13545 a1e9b5b757bb62c7aed126421f914870 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 102 122 6.4E-45 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13545 a1e9b5b757bb62c7aed126421f914870 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 123 143 6.4E-45 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS13545 a1e9b5b757bb62c7aed126421f914870 248 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 47 229 5.0E-66 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SCD_RS05750 239f107bcd8eed8f106883a2f26ead61 716 Gene3D G3DSA:3.40.190.10 225 418 2.4E-29 T 22-04-2016 SCD_RS05750 239f107bcd8eed8f106883a2f26ead61 716 Gene3D G3DSA:3.10.105.10 419 641 9.4E-47 T 22-04-2016 SCD_RS05750 239f107bcd8eed8f106883a2f26ead61 716 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 584 2.2E-54 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain SCD_RS05750 239f107bcd8eed8f106883a2f26ead61 716 SUPERFAMILY SSF53850 39 129 1.12E-90 T 22-04-2016 SCD_RS05750 239f107bcd8eed8f106883a2f26ead61 716 SUPERFAMILY SSF53850 165 659 1.12E-90 T 22-04-2016 SCD_RS05750 239f107bcd8eed8f106883a2f26ead61 716 PANTHER PTHR30290 97 127 2.8E-64 T 22-04-2016 SCD_RS05750 239f107bcd8eed8f106883a2f26ead61 716 PANTHER PTHR30290 163 195 2.8E-64 T 22-04-2016 SCD_RS05750 239f107bcd8eed8f106883a2f26ead61 716 PANTHER PTHR30290 5 75 2.8E-64 T 22-04-2016 SCD_RS05750 239f107bcd8eed8f106883a2f26ead61 716 PANTHER PTHR30290 226 311 2.8E-64 T 22-04-2016 SCD_RS05750 239f107bcd8eed8f106883a2f26ead61 716 PANTHER PTHR30290 333 681 2.8E-64 T 22-04-2016 SCD_RS13480 a7828155ca3fe81e3c8318de0e97d6d8 251 PANTHER PTHR14136:SF0 36 228 2.4E-31 T 22-04-2016 SCD_RS13480 a7828155ca3fe81e3c8318de0e97d6d8 251 SUPERFAMILY SSF141571 36 158 9.94E-32 T 22-04-2016 SCD_RS13480 a7828155ca3fe81e3c8318de0e97d6d8 251 Pfam PF00805 Pentapeptide repeats (8 copies) 116 152 6.1E-6 T 22-04-2016 IPR001646 Pentapeptide repeat SCD_RS13480 a7828155ca3fe81e3c8318de0e97d6d8 251 Pfam PF00805 Pentapeptide repeats (8 copies) 76 112 1.7E-10 T 22-04-2016 IPR001646 Pentapeptide repeat SCD_RS13480 a7828155ca3fe81e3c8318de0e97d6d8 251 Pfam PF00805 Pentapeptide repeats (8 copies) 36 75 3.7E-11 T 22-04-2016 IPR001646 Pentapeptide repeat SCD_RS13480 a7828155ca3fe81e3c8318de0e97d6d8 251 Pfam PF00805 Pentapeptide repeats (8 copies) 186 223 6.6E-9 T 22-04-2016 IPR001646 Pentapeptide repeat SCD_RS13480 a7828155ca3fe81e3c8318de0e97d6d8 251 PANTHER PTHR14136 36 228 2.4E-31 T 22-04-2016 SCD_RS13480 a7828155ca3fe81e3c8318de0e97d6d8 251 SUPERFAMILY SSF141571 129 233 4.32E-22 T 22-04-2016 SCD_RS14185 cda49c05794ab989c673e9ed36dc9e1e 323 Pfam PF13524 Glycosyl transferases group 1 219 303 5.3E-20 T 22-04-2016 SCD_RS14995 011db911fc32382d02ba9221b65067dc 252 PANTHER PTHR13696 1 252 1.9E-93 T 22-04-2016 SCD_RS14995 011db911fc32382d02ba9221b65067dc 252 PANTHER PTHR13696:SF52 1 252 1.9E-93 T 22-04-2016 SCD_RS14995 011db911fc32382d02ba9221b65067dc 252 SUPERFAMILY SSF52540 1 251 6.08E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14995 011db911fc32382d02ba9221b65067dc 252 Gene3D G3DSA:3.40.50.300 3 251 8.8E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14995 011db911fc32382d02ba9221b65067dc 252 Pfam PF13614 AAA domain 3 178 3.3E-66 T 22-04-2016 IPR025669 AAA domain SCD_RS02840 ae83b7898ccf9c253d28bb23498f9b98 380 SMART SM00028 192 225 150.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS02840 ae83b7898ccf9c253d28bb23498f9b98 380 SMART SM00028 327 360 14.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS02840 ae83b7898ccf9c253d28bb23498f9b98 380 SMART SM00028 293 326 6.7 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS02840 ae83b7898ccf9c253d28bb23498f9b98 380 SMART SM00028 226 259 0.24 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS02840 ae83b7898ccf9c253d28bb23498f9b98 380 Pfam PF13432 Tetratricopeptide repeat 269 319 1.8E-5 T 22-04-2016 SCD_RS02840 ae83b7898ccf9c253d28bb23498f9b98 380 Pfam PF14559 Tetratricopeptide repeat 205 264 1.5E-7 T 22-04-2016 SCD_RS02840 ae83b7898ccf9c253d28bb23498f9b98 380 Gene3D G3DSA:1.25.40.10 196 356 9.4E-29 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS02840 ae83b7898ccf9c253d28bb23498f9b98 380 PANTHER PTHR23083 196 357 1.1E-19 T 22-04-2016 SCD_RS02840 ae83b7898ccf9c253d28bb23498f9b98 380 SUPERFAMILY SSF48452 198 356 5.69E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS03570 a0b05888ea82a97f290f6d578aa39d6b 432 Pfam PF00999 Sodium/hydrogen exchanger family 10 425 7.5E-37 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SCD_RS03570 a0b05888ea82a97f290f6d578aa39d6b 432 PANTHER PTHR32507:SF12 302 430 3.3E-118 T 22-04-2016 SCD_RS03570 a0b05888ea82a97f290f6d578aa39d6b 432 PANTHER PTHR32507:SF12 1 269 3.3E-118 T 22-04-2016 SCD_RS03570 a0b05888ea82a97f290f6d578aa39d6b 432 PANTHER PTHR32507 302 430 3.3E-118 T 22-04-2016 SCD_RS03570 a0b05888ea82a97f290f6d578aa39d6b 432 PANTHER PTHR32507 1 269 3.3E-118 T 22-04-2016 SCD_RS01680 a3ea0394567af25e4eb568ec71b25b79 130 PANTHER PTHR10516 2 130 1.4E-50 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SCD_RS01680 a3ea0394567af25e4eb568ec71b25b79 130 SUPERFAMILY SSF54534 8 127 4.32E-46 T 22-04-2016 SCD_RS01680 a3ea0394567af25e4eb568ec71b25b79 130 Gene3D G3DSA:3.10.50.40 10 128 1.8E-47 T 22-04-2016 SCD_RS01680 a3ea0394567af25e4eb568ec71b25b79 130 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 39 125 1.7E-30 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SCD_RS03685 606e282573cca48470fcb4df2ce7aad1 167 Pfam PF09851 Short C-terminal domain 138 164 2.3E-6 T 22-04-2016 IPR018649 SHOCT domain SCD_RS11750 51b1933b6ca692075c17cdc146cba727 142 Pfam PF11697 Protein of unknown function (DUF3293) 54 125 1.2E-24 T 22-04-2016 IPR021710 Protein of unknown function DUF3293 SCD_RS14865 eb26ee36b969ad21567674f073385622 468 SUPERFAMILY SSF56935 76 218 8.98E-13 T 22-04-2016 SCD_RS14865 eb26ee36b969ad21567674f073385622 468 SUPERFAMILY SSF56935 250 386 8.98E-13 T 22-04-2016 SCD_RS14865 eb26ee36b969ad21567674f073385622 468 SUPERFAMILY SSF56935 417 468 8.98E-13 T 22-04-2016 SCD_RS14865 eb26ee36b969ad21567674f073385622 468 Gene3D G3DSA:2.40.160.10 108 468 2.3E-5 T 22-04-2016 IPR023614 Porin domain SCD_RS06715 37c876d412fa677f8b02533f35ec16a3 429 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 424 5.2E-82 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit SCD_RS06715 37c876d412fa677f8b02533f35ec16a3 429 PANTHER PTHR33362 1 428 1.6E-76 T 22-04-2016 SCD_RS06715 37c876d412fa677f8b02533f35ec16a3 429 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 427 1.4E-100 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 SCD_RS06715 37c876d412fa677f8b02533f35ec16a3 429 PIRSF PIRSF006066 1 429 1.4E-99 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 SCD_RS07985 c388136df02cff22e8363c4a568de361 595 Pfam PF07664 Ferrous iron transport protein B C terminus 388 436 6.2E-15 T 22-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 SCD_RS07985 c388136df02cff22e8363c4a568de361 595 SUPERFAMILY SSF52540 3 169 8.94E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07985 c388136df02cff22e8363c4a568de361 595 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 193 561 2.0E-113 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SCD_RS07985 c388136df02cff22e8363c4a568de361 595 Pfam PF02421 Ferrous iron transport protein B 3 154 3.7E-50 T 22-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 SCD_RS07985 c388136df02cff22e8363c4a568de361 595 Gene3D G3DSA:3.40.50.300 3 165 4.0E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS07985 c388136df02cff22e8363c4a568de361 595 Pfam PF07670 Nucleoside recognition 284 376 4.4E-11 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SCD_RS07985 c388136df02cff22e8363c4a568de361 595 Pfam PF07670 Nucleoside recognition 445 564 3.9E-28 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SCD_RS07985 c388136df02cff22e8363c4a568de361 595 PANTHER PTHR11649:SF37 196 591 6.6E-211 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SCD_RS07985 c388136df02cff22e8363c4a568de361 595 PANTHER PTHR11649:SF37 3 144 6.6E-211 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SCD_RS07985 c388136df02cff22e8363c4a568de361 595 PANTHER PTHR11649 196 591 6.6E-211 T 22-04-2016 SCD_RS07985 c388136df02cff22e8363c4a568de361 595 PANTHER PTHR11649 3 144 6.6E-211 T 22-04-2016 SCD_RS06865 d45874962e9ced1cd3c04b081f903fb5 473 Pfam PF10996 Beta-Casp domain 260 385 8.1E-26 T 22-04-2016 IPR022712 Beta-Casp domain SCD_RS06865 d45874962e9ced1cd3c04b081f903fb5 473 SMART SM01027 260 385 2.1E-51 T 22-04-2016 IPR022712 Beta-Casp domain SCD_RS06865 d45874962e9ced1cd3c04b081f903fb5 473 Gene3D G3DSA:3.60.15.10 142 273 2.8E-51 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS06865 d45874962e9ced1cd3c04b081f903fb5 473 Gene3D G3DSA:3.60.15.10 1 100 2.8E-51 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS06865 d45874962e9ced1cd3c04b081f903fb5 473 PANTHER PTHR11203:SF11 1 469 2.2E-115 T 22-04-2016 SCD_RS06865 d45874962e9ced1cd3c04b081f903fb5 473 PANTHER PTHR11203 1 469 2.2E-115 T 22-04-2016 SCD_RS06865 d45874962e9ced1cd3c04b081f903fb5 473 SMART SM00849 13 239 4.4E-16 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS06865 d45874962e9ced1cd3c04b081f903fb5 473 SUPERFAMILY SSF56281 1 466 3.14E-127 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS06865 d45874962e9ced1cd3c04b081f903fb5 473 Pfam PF00753 Metallo-beta-lactamase superfamily 12 205 6.3E-14 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS06865 d45874962e9ced1cd3c04b081f903fb5 473 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 399 461 7.0E-16 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain SCD_RS11835 e825c2052c6726a77e9786bc5cd67a8a 261 PANTHER PTHR22916 6 229 1.4E-48 T 22-04-2016 SCD_RS11835 e825c2052c6726a77e9786bc5cd67a8a 261 Pfam PF00535 Glycosyl transferase family 2 10 128 8.2E-18 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SCD_RS11835 e825c2052c6726a77e9786bc5cd67a8a 261 Gene3D G3DSA:3.90.550.10 6 173 7.6E-28 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS11835 e825c2052c6726a77e9786bc5cd67a8a 261 SUPERFAMILY SSF53448 7 190 1.13E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS11835 e825c2052c6726a77e9786bc5cd67a8a 261 PANTHER PTHR22916:SF4 6 229 1.4E-48 T 22-04-2016 SCD_RS14580 17cb67aa927df8864e8a6cb87a4cda39 178 Hamap MF_00109 Shikimate kinase [aroK]. 2 168 30.343 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SCD_RS14580 17cb67aa927df8864e8a6cb87a4cda39 178 Pfam PF01202 Shikimate kinase 11 167 9.8E-55 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SCD_RS14580 17cb67aa927df8864e8a6cb87a4cda39 178 PRINTS PR01100 Shikimate kinase family signature 96 113 3.0E-26 T 22-04-2016 SCD_RS14580 17cb67aa927df8864e8a6cb87a4cda39 178 PRINTS PR01100 Shikimate kinase family signature 29 42 3.0E-26 T 22-04-2016 SCD_RS14580 17cb67aa927df8864e8a6cb87a4cda39 178 PRINTS PR01100 Shikimate kinase family signature 57 65 3.0E-26 T 22-04-2016 SCD_RS14580 17cb67aa927df8864e8a6cb87a4cda39 178 PRINTS PR01100 Shikimate kinase family signature 5 20 3.0E-26 T 22-04-2016 SCD_RS14580 17cb67aa927df8864e8a6cb87a4cda39 178 PRINTS PR01100 Shikimate kinase family signature 75 84 3.0E-26 T 22-04-2016 SCD_RS14580 17cb67aa927df8864e8a6cb87a4cda39 178 Gene3D G3DSA:3.40.50.300 4 169 7.5E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14580 17cb67aa927df8864e8a6cb87a4cda39 178 SUPERFAMILY SSF52540 4 167 2.34E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14580 17cb67aa927df8864e8a6cb87a4cda39 178 ProSitePatterns PS01128 Shikimate kinase signature. 58 83 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SCD_RS14580 17cb67aa927df8864e8a6cb87a4cda39 178 PANTHER PTHR21087 4 167 3.8E-63 T 22-04-2016 SCD_RS14830 b634ccbf67180b3d6e7779cf578265d6 226 PANTHER PTHR23416 136 222 3.0E-12 T 22-04-2016 SCD_RS14830 b634ccbf67180b3d6e7779cf578265d6 226 PANTHER PTHR23416:SF69 136 222 3.0E-12 T 22-04-2016 SCD_RS14830 b634ccbf67180b3d6e7779cf578265d6 226 Gene3D G3DSA:2.160.10.10 120 221 1.8E-24 T 22-04-2016 SCD_RS14830 b634ccbf67180b3d6e7779cf578265d6 226 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 164 199 4.8E-8 T 22-04-2016 IPR001451 Hexapeptide repeat SCD_RS14830 b634ccbf67180b3d6e7779cf578265d6 226 SUPERFAMILY SSF51161 81 221 1.36E-26 T 22-04-2016 IPR011004 Trimeric LpxA-like SCD_RS11380 cbce101c9f9554fe1c4f1516468af3a6 178 Pfam PF14235 Domain of unknown function (DUF4337) 11 174 4.5E-53 T 22-04-2016 IPR025570 Protein of unknown function DUF4337 SCD_RS09990 f59d4b7d009c958264eab339894a102f 296 SUPERFAMILY SSF81901 214 293 1.44E-17 T 22-04-2016 SCD_RS09990 f59d4b7d009c958264eab339894a102f 296 Gene3D G3DSA:1.25.40.10 214 295 4.3E-20 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS09990 f59d4b7d009c958264eab339894a102f 296 SUPERFAMILY SSF81901 31 156 1.7E-28 T 22-04-2016 SCD_RS09990 f59d4b7d009c958264eab339894a102f 296 Pfam PF08238 Sel1 repeat 113 147 7.8E-9 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS09990 f59d4b7d009c958264eab339894a102f 296 Pfam PF08238 Sel1 repeat 41 75 5.5E-6 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS09990 f59d4b7d009c958264eab339894a102f 296 Pfam PF08238 Sel1 repeat 76 111 1.7E-4 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS09990 f59d4b7d009c958264eab339894a102f 296 Pfam PF08238 Sel1 repeat 261 291 0.0032 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS09990 f59d4b7d009c958264eab339894a102f 296 Pfam PF08238 Sel1 repeat 224 258 3.6E-8 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS09990 f59d4b7d009c958264eab339894a102f 296 SMART SM00671 259 295 0.015 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS09990 f59d4b7d009c958264eab339894a102f 296 SMART SM00671 39 75 0.0024 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS09990 f59d4b7d009c958264eab339894a102f 296 SMART SM00671 223 258 1.2E-7 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS09990 f59d4b7d009c958264eab339894a102f 296 SMART SM00671 76 111 6.9E-6 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS09990 f59d4b7d009c958264eab339894a102f 296 SMART SM00671 112 147 4.0E-11 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS09990 f59d4b7d009c958264eab339894a102f 296 Gene3D G3DSA:1.25.40.10 30 160 1.8E-33 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS09990 f59d4b7d009c958264eab339894a102f 296 PANTHER PTHR11102 27 158 8.4E-45 T 22-04-2016 SCD_RS09990 f59d4b7d009c958264eab339894a102f 296 PANTHER PTHR11102 198 290 8.4E-45 T 22-04-2016 SCD_RS01110 c36195c26204ac8ab305199ec8a9d3ac 128 SMART SM00450 5 111 1.1E-12 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS01110 c36195c26204ac8ab305199ec8a9d3ac 128 SUPERFAMILY SSF52821 2 127 4.32E-22 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS01110 c36195c26204ac8ab305199ec8a9d3ac 128 Gene3D G3DSA:3.40.250.10 2 127 6.8E-33 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS01110 c36195c26204ac8ab305199ec8a9d3ac 128 Pfam PF00581 Rhodanese-like domain 6 103 2.5E-8 T 22-04-2016 IPR001763 Rhodanese-like domain SCD_RS07420 32d251356554351c54419fa7a84c3e99 63 Gene3D G3DSA:1.10.150.250 1 62 5.1E-13 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase SCD_RS07420 32d251356554351c54419fa7a84c3e99 63 SUPERFAMILY SSF109910 1 47 8.37E-12 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase SCD_RS07420 32d251356554351c54419fa7a84c3e99 63 Pfam PF03937 Flavinator of succinate dehydrogenase 1 51 2.1E-12 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase SCD_RS08600 926cb29ef5cd82946b4aed1e3d0cc606 284 PANTHER PTHR10992:SF771 9 281 8.8E-18 T 22-04-2016 SCD_RS08600 926cb29ef5cd82946b4aed1e3d0cc606 284 PANTHER PTHR10992 9 281 8.8E-18 T 22-04-2016 SCD_RS08600 926cb29ef5cd82946b4aed1e3d0cc606 284 Pfam PF12697 Alpha/beta hydrolase family 32 273 1.6E-16 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SCD_RS08600 926cb29ef5cd82946b4aed1e3d0cc606 284 Gene3D G3DSA:3.40.50.1820 5 275 1.7E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SCD_RS08600 926cb29ef5cd82946b4aed1e3d0cc606 284 SUPERFAMILY SSF53474 4 275 9.21E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SCD_RS09000 fb83cd080545093a69a9f93040b5416a 179 PANTHER PTHR35011 2 173 1.9E-33 T 22-04-2016 SCD_RS09000 fb83cd080545093a69a9f93040b5416a 179 PANTHER PTHR35011:SF1 2 173 1.9E-33 T 22-04-2016 SCD_RS09000 fb83cd080545093a69a9f93040b5416a 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 22 148 9.1E-30 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component SCD_RS11965 a7ff2c2e768cf99d9a3afd5df85c8edf 479 PANTHER PTHR34595 5 479 3.7E-293 T 22-04-2016 SCD_RS11965 a7ff2c2e768cf99d9a3afd5df85c8edf 479 SUPERFAMILY SSF56059 46 218 6.59E-61 T 22-04-2016 SCD_RS11965 a7ff2c2e768cf99d9a3afd5df85c8edf 479 SUPERFAMILY SSF56059 325 470 6.59E-61 T 22-04-2016 SCD_RS11965 a7ff2c2e768cf99d9a3afd5df85c8edf 479 PIRSF PIRSF005522 1 479 8.7E-228 T 22-04-2016 IPR016450 Uncharacterised conserved protein UCP005522 SCD_RS11965 a7ff2c2e768cf99d9a3afd5df85c8edf 479 Pfam PF14403 Circularly permuted ATP-grasp type 2 80 455 2.1E-164 T 22-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 SCD_RS11965 a7ff2c2e768cf99d9a3afd5df85c8edf 479 PANTHER PTHR34595:SF3 5 479 3.7E-293 T 22-04-2016 SCD_RS00230 840254e69fffd07a6aedf52e6d8f2b8c 242 Gene3D G3DSA:3.40.50.450 27 228 1.1E-62 T 22-04-2016 SCD_RS00230 840254e69fffd07a6aedf52e6d8f2b8c 242 Pfam PF03641 Possible lysine decarboxylase 90 220 1.5E-33 T 22-04-2016 IPR031100 LOG family SCD_RS00230 840254e69fffd07a6aedf52e6d8f2b8c 242 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 48 223 3.2E-48 T 22-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG SCD_RS00230 840254e69fffd07a6aedf52e6d8f2b8c 242 PANTHER PTHR31223 26 225 1.7E-88 T 22-04-2016 SCD_RS00230 840254e69fffd07a6aedf52e6d8f2b8c 242 PANTHER PTHR31223:SF1 26 225 1.7E-88 T 22-04-2016 SCD_RS00230 840254e69fffd07a6aedf52e6d8f2b8c 242 SUPERFAMILY SSF102405 22 221 6.26E-62 T 22-04-2016 SCD_RS00380 37c43e89fcff1965c010c4595a3beb59 137 PIRSF PIRSF004638 1 137 4.7E-56 T 22-04-2016 IPR005265 Uncharacterised protein family UPF0093 SCD_RS00380 37c43e89fcff1965c010c4595a3beb59 137 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 2 137 2.6E-44 T 22-04-2016 IPR014351 Conserved hypothetical protein CHP00701 SCD_RS00380 37c43e89fcff1965c010c4595a3beb59 137 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 137 9.1E-50 T 22-04-2016 IPR005265 Uncharacterised protein family UPF0093 SCD_RS00380 37c43e89fcff1965c010c4595a3beb59 137 PANTHER PTHR40255 1 137 1.6E-52 T 22-04-2016 SCD_RS08335 f1e8af1b2e0d5009dba728d5f78fb231 378 PANTHER PTHR30158 1 365 3.9E-130 T 22-04-2016 SCD_RS08335 f1e8af1b2e0d5009dba728d5f78fb231 378 PANTHER PTHR30158:SF3 1 365 3.9E-130 T 22-04-2016 SCD_RS08335 f1e8af1b2e0d5009dba728d5f78fb231 378 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 359 9.5E-79 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SCD_RS08335 f1e8af1b2e0d5009dba728d5f78fb231 378 Gene3D G3DSA:2.40.50.100 159 193 3.3E-21 T 22-04-2016 SCD_RS08335 f1e8af1b2e0d5009dba728d5f78fb231 378 Gene3D G3DSA:2.40.50.100 65 98 3.3E-21 T 22-04-2016 SCD_RS08335 f1e8af1b2e0d5009dba728d5f78fb231 378 SUPERFAMILY SSF111369 51 283 6.02E-81 T 22-04-2016 SCD_RS08335 f1e8af1b2e0d5009dba728d5f78fb231 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 278 1.5E-12 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SCD_RS01190 07bee2c225bae25d73c2feef65784985 454 SUPERFAMILY SSF102114 191 413 1.12E-37 T 22-04-2016 SCD_RS01190 07bee2c225bae25d73c2feef65784985 454 SMART SM00729 192 409 2.0E-20 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SCD_RS01190 07bee2c225bae25d73c2feef65784985 454 Pfam PF00919 Uncharacterized protein family UPF0004 13 102 1.5E-12 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 SCD_RS01190 07bee2c225bae25d73c2feef65784985 454 Pfam PF04055 Radical SAM superfamily 196 367 6.6E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SCD_RS01190 07bee2c225bae25d73c2feef65784985 454 PANTHER PTHR11918 173 414 4.2E-56 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein SCD_RS01190 07bee2c225bae25d73c2feef65784985 454 PANTHER PTHR11918 21 117 4.2E-56 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein SCD_RS01190 07bee2c225bae25d73c2feef65784985 454 Gene3D G3DSA:3.80.30.20 194 414 1.8E-45 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SCD_RS09435 6104ded267acfcd0fcb608630642ad06 257 SUPERFAMILY SSF46626 51 140 3.99E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS09435 6104ded267acfcd0fcb608630642ad06 257 PANTHER PTHR33751:SF3 60 255 6.1E-23 T 22-04-2016 SCD_RS09435 6104ded267acfcd0fcb608630642ad06 257 Gene3D G3DSA:1.10.760.10 169 255 3.9E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS09435 6104ded267acfcd0fcb608630642ad06 257 Gene3D G3DSA:1.10.760.10 55 140 4.8E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS09435 6104ded267acfcd0fcb608630642ad06 257 SUPERFAMILY SSF46626 170 254 1.55E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS09435 6104ded267acfcd0fcb608630642ad06 257 PANTHER PTHR33751 60 255 6.1E-23 T 22-04-2016 SCD_RS09435 6104ded267acfcd0fcb608630642ad06 257 Pfam PF00034 Cytochrome c 178 255 3.4E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS09435 6104ded267acfcd0fcb608630642ad06 257 Pfam PF00034 Cytochrome c 71 141 2.2E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS14615 b7c8a039d9735e4c853eebc2b6727b02 334 Pfam PF13401 AAA domain 42 171 2.0E-21 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS14615 b7c8a039d9735e4c853eebc2b6727b02 334 TIGRFAM TIGR03015 pepcterm_ATPase: putative secretion ATPase, PEP-CTERM locus subfamily 1 269 3.7E-128 T 22-04-2016 IPR017466 ATPase, secretion system, PEP-CTERM, predicted SCD_RS14615 b7c8a039d9735e4c853eebc2b6727b02 334 PANTHER PTHR35894:SF1 2 269 8.2E-77 T 22-04-2016 SCD_RS14615 b7c8a039d9735e4c853eebc2b6727b02 334 SMART SM00382 42 209 6.2E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS14615 b7c8a039d9735e4c853eebc2b6727b02 334 PANTHER PTHR35894 2 269 8.2E-77 T 22-04-2016 SCD_RS14615 b7c8a039d9735e4c853eebc2b6727b02 334 SUPERFAMILY SSF52540 5 265 1.06E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14615 b7c8a039d9735e4c853eebc2b6727b02 334 Gene3D G3DSA:3.40.50.300 37 182 1.3E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14735 cb4e85c4152f8e5105578c6aaf10ba8c 302 Pfam PF13469 Sulfotransferase family 46 257 3.0E-15 T 22-04-2016 SCD_RS14735 cb4e85c4152f8e5105578c6aaf10ba8c 302 SUPERFAMILY SSF52540 46 300 1.1E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS14735 cb4e85c4152f8e5105578c6aaf10ba8c 302 Gene3D G3DSA:3.40.50.300 29 243 1.9E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05250 8a54b3ed9ce409486f1a1f1033808501 283 Gene3D G3DSA:3.20.20.70 35 208 1.4E-13 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS05250 8a54b3ed9ce409486f1a1f1033808501 283 PANTHER PTHR11228 84 188 4.9E-13 T 22-04-2016 SCD_RS05250 8a54b3ed9ce409486f1a1f1033808501 283 PANTHER PTHR11228 22 67 4.9E-13 T 22-04-2016 SCD_RS05250 8a54b3ed9ce409486f1a1f1033808501 283 PANTHER PTHR11228:SF25 84 188 4.9E-13 T 22-04-2016 SCD_RS05250 8a54b3ed9ce409486f1a1f1033808501 283 PANTHER PTHR11228:SF25 22 67 4.9E-13 T 22-04-2016 SCD_RS05250 8a54b3ed9ce409486f1a1f1033808501 283 SUPERFAMILY SSF102114 35 205 6.41E-12 T 22-04-2016 SCD_RS05250 8a54b3ed9ce409486f1a1f1033808501 283 Pfam PF04055 Radical SAM superfamily 41 196 3.2E-7 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SCD_RS10270 dee2bb765b9f0cd878b4072dc4e03533 315 Gene3D G3DSA:3.40.50.2300 135 266 2.3E-19 T 22-04-2016 SCD_RS10270 dee2bb765b9f0cd878b4072dc4e03533 315 Pfam PF04392 ABC transporter substrate binding protein 134 300 8.3E-13 T 22-04-2016 IPR007487 ABC transporter, substrate-binding protein SCD_RS10270 dee2bb765b9f0cd878b4072dc4e03533 315 PANTHER PTHR35271 1 310 1.0E-27 T 22-04-2016 SCD_RS01230 33a83ab43b69edb850c4e67559437e8c 370 Pfam PF14020 Protein of unknown function (DUF4236) 3 53 5.1E-17 T 22-04-2016 IPR025330 Domain of unknown function DUF4236 SCD_RS05320 faf17759297d1b4b84192ea276a3269f 93 Gene3D G3DSA:1.10.260.40 12 75 1.1E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SCD_RS05320 faf17759297d1b4b84192ea276a3269f 93 Pfam PF13560 Helix-turn-helix domain 18 75 2.6E-11 T 22-04-2016 SCD_RS05320 faf17759297d1b4b84192ea276a3269f 93 SMART SM00530 22 77 6.3E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SCD_RS05320 faf17759297d1b4b84192ea276a3269f 93 SUPERFAMILY SSF47413 12 75 4.56E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SCD_RS13410 6b2542849d3327b6f2c627bed5d3e5cd 517 PANTHER PTHR11921:SF24 354 511 4.9E-97 T 22-04-2016 SCD_RS13410 6b2542849d3327b6f2c627bed5d3e5cd 517 PANTHER PTHR11921:SF24 78 332 4.9E-97 T 22-04-2016 SCD_RS13410 6b2542849d3327b6f2c627bed5d3e5cd 517 SUPERFAMILY SSF46548 76 176 1.67E-14 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SCD_RS13410 6b2542849d3327b6f2c627bed5d3e5cd 517 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 150 161 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SCD_RS13410 6b2542849d3327b6f2c627bed5d3e5cd 517 Pfam PF13183 4Fe-4S dicluster domain 78 164 2.0E-10 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SCD_RS13410 6b2542849d3327b6f2c627bed5d3e5cd 517 Gene3D G3DSA:1.10.1060.10 78 177 7.1E-16 T 22-04-2016 SCD_RS13410 6b2542849d3327b6f2c627bed5d3e5cd 517 PANTHER PTHR11921 354 511 4.9E-97 T 22-04-2016 SCD_RS13410 6b2542849d3327b6f2c627bed5d3e5cd 517 PANTHER PTHR11921 78 332 4.9E-97 T 22-04-2016 SCD_RS13410 6b2542849d3327b6f2c627bed5d3e5cd 517 Pfam PF02754 Cysteine-rich domain 384 484 0.0013 T 22-04-2016 IPR004017 Cysteine-rich domain SCD_RS07220 280f8c4befa11a85d9dd4d1054ce5afa 437 PANTHER PTHR10283:SF21 4 437 1.7E-135 T 22-04-2016 SCD_RS07220 280f8c4befa11a85d9dd4d1054ce5afa 437 Pfam PF02040 Arsenical pump membrane protein 4 433 7.0E-141 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SCD_RS07220 280f8c4befa11a85d9dd4d1054ce5afa 437 PRINTS PR00758 Arsenical pump membrane protein signature 331 353 3.0E-79 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SCD_RS07220 280f8c4befa11a85d9dd4d1054ce5afa 437 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 3.0E-79 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SCD_RS07220 280f8c4befa11a85d9dd4d1054ce5afa 437 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 3.0E-79 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SCD_RS07220 280f8c4befa11a85d9dd4d1054ce5afa 437 PRINTS PR00758 Arsenical pump membrane protein signature 286 310 3.0E-79 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SCD_RS07220 280f8c4befa11a85d9dd4d1054ce5afa 437 PRINTS PR00758 Arsenical pump membrane protein signature 372 397 3.0E-79 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SCD_RS07220 280f8c4befa11a85d9dd4d1054ce5afa 437 PRINTS PR00758 Arsenical pump membrane protein signature 405 429 3.0E-79 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SCD_RS07220 280f8c4befa11a85d9dd4d1054ce5afa 437 PANTHER PTHR10283 4 437 1.7E-135 T 22-04-2016 SCD_RS07220 280f8c4befa11a85d9dd4d1054ce5afa 437 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 434 7.6E-176 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SCD_RS07090 2f97c44d4a86cdd06322df9b5e95a7bc 393 PANTHER PTHR23518:SF2 6 381 6.2E-103 T 22-04-2016 SCD_RS07090 2f97c44d4a86cdd06322df9b5e95a7bc 393 SUPERFAMILY SSF103473 11 390 1.44E-54 T 22-04-2016 IPR020846 Major facilitator superfamily domain SCD_RS07090 2f97c44d4a86cdd06322df9b5e95a7bc 393 Pfam PF07690 Major Facilitator Superfamily 16 231 5.5E-19 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SCD_RS07090 2f97c44d4a86cdd06322df9b5e95a7bc 393 Gene3D G3DSA:1.20.1250.20 215 389 1.1E-28 T 22-04-2016 SCD_RS07090 2f97c44d4a86cdd06322df9b5e95a7bc 393 Gene3D G3DSA:1.20.1250.20 11 193 2.1E-22 T 22-04-2016 SCD_RS07090 2f97c44d4a86cdd06322df9b5e95a7bc 393 PANTHER PTHR23518 6 381 6.2E-103 T 22-04-2016 SCD_RS02065 3ba1de16976e27048bf331ff4ff50297 567 Pfam PF08479 POTRA domain, ShlB-type 83 157 5.4E-17 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type SCD_RS02065 3ba1de16976e27048bf331ff4ff50297 567 Gene3D G3DSA:3.10.20.310 83 157 2.8E-15 T 22-04-2016 SCD_RS02065 3ba1de16976e27048bf331ff4ff50297 567 Pfam PF01103 Surface antigen 407 567 4.3E-7 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 SCD_RS02065 3ba1de16976e27048bf331ff4ff50297 567 Gene3D G3DSA:2.40.160.50 190 567 5.6E-52 T 22-04-2016 SCD_RS02065 3ba1de16976e27048bf331ff4ff50297 567 PANTHER PTHR34597 56 567 4.8E-59 T 22-04-2016 SCD_RS06975 5651f28d1f7732035cc8a8fbda1faec3 241 PANTHER PTHR30456:SF0 1 241 8.0E-134 T 22-04-2016 SCD_RS06975 5651f28d1f7732035cc8a8fbda1faec3 241 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 241 129.821 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SCD_RS06975 5651f28d1f7732035cc8a8fbda1faec3 241 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 4 236 1.3E-94 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SCD_RS06975 5651f28d1f7732035cc8a8fbda1faec3 241 Gene3D G3DSA:3.20.20.70 1 237 1.5E-106 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS06975 5651f28d1f7732035cc8a8fbda1faec3 241 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 3 236 1.7E-101 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SCD_RS06975 5651f28d1f7732035cc8a8fbda1faec3 241 SUPERFAMILY SSF63892 1 236 7.32E-98 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SCD_RS06975 5651f28d1f7732035cc8a8fbda1faec3 241 PANTHER PTHR30456 1 241 8.0E-134 T 22-04-2016 SCD_RS07975 c8cabdd4317f7a0e44761639160e3cda 278 PANTHER PTHR21057:SF2 5 277 3.1E-164 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SCD_RS07975 c8cabdd4317f7a0e44761639160e3cda 278 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 270 1.5E-124 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SCD_RS07975 c8cabdd4317f7a0e44761639160e3cda 278 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 271 52.254 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SCD_RS07975 c8cabdd4317f7a0e44761639160e3cda 278 Pfam PF00793 DAHP synthetase I family 8 269 7.4E-68 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SCD_RS07975 c8cabdd4317f7a0e44761639160e3cda 278 Gene3D G3DSA:3.20.20.70 12 271 3.2E-115 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS07975 c8cabdd4317f7a0e44761639160e3cda 278 PANTHER PTHR21057 5 277 3.1E-164 T 22-04-2016 SCD_RS07975 c8cabdd4317f7a0e44761639160e3cda 278 SUPERFAMILY SSF51569 2 271 1.37E-104 T 22-04-2016 SCD_RS08580 ee1b7047ec31af677770ad337031b7f5 156 SUPERFAMILY SSF52172 15 101 5.41E-6 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS08580 ee1b7047ec31af677770ad337031b7f5 156 Gene3D G3DSA:3.40.50.2300 14 136 2.4E-6 T 22-04-2016 SCD_RS12065 e0b76771224522499d1a18987e2314ee 165 Gene3D G3DSA:2.60.120.260 21 145 5.0E-10 T 22-04-2016 IPR008979 Galactose-binding domain-like SCD_RS12065 e0b76771224522499d1a18987e2314ee 165 SUPERFAMILY SSF49785 25 131 6.73E-11 T 22-04-2016 IPR008979 Galactose-binding domain-like SCD_RS12065 e0b76771224522499d1a18987e2314ee 165 Pfam PF00754 F5/8 type C domain 35 123 1.8E-9 T 22-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain SCD_RS10570 11da73ac6833787f08800f960ee7fa1b 119 Pfam PF09722 Protein of unknown function (DUF2384) 69 117 5.7E-11 T 22-04-2016 IPR024467 Domain of unknown function DUF2384 SCD_RS10880 3930832264afce584124e2c41b61c92c 135 Pfam PF10861 Protein of Unknown function (DUF2784) 1 116 5.4E-32 T 22-04-2016 IPR021218 Protein of unknown function DUF2784 SCD_RS11940 3e9e0059f9ad9f305e92828e2e42221f 489 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 6 457 7.2E-154 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 SCD_RS11940 3e9e0059f9ad9f305e92828e2e42221f 489 PANTHER PTHR32057 1 489 3.0E-210 T 22-04-2016 SCD_RS11940 3e9e0059f9ad9f305e92828e2e42221f 489 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 475 46.775 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 SCD_RS12690 1588e8be0434e43326d84d959c6e3e3a 238 SMART SM00563 71 185 4.4E-28 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SCD_RS12690 1588e8be0434e43326d84d959c6e3e3a 238 Gene3D G3DSA:3.40.1130.10 63 227 3.8E-21 T 22-04-2016 SCD_RS12690 1588e8be0434e43326d84d959c6e3e3a 238 Pfam PF01553 Acyltransferase 59 182 6.7E-17 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SCD_RS12690 1588e8be0434e43326d84d959c6e3e3a 238 SUPERFAMILY SSF69593 13 220 3.66E-38 T 22-04-2016 SCD_RS12690 1588e8be0434e43326d84d959c6e3e3a 238 PANTHER PTHR10434 1 233 1.8E-41 T 22-04-2016 SCD_RS06475 bd8fb0529e698d51bf285bf425f72ce6 444 Gene3D G3DSA:2.40.160.60 26 444 7.6E-63 T 22-04-2016 SCD_RS06475 bd8fb0529e698d51bf285bf425f72ce6 444 SUPERFAMILY SSF56935 27 396 9.16E-40 T 22-04-2016 SCD_RS06475 bd8fb0529e698d51bf285bf425f72ce6 444 PANTHER PTHR35093 3 444 1.2E-17 T 22-04-2016 SCD_RS06475 bd8fb0529e698d51bf285bf425f72ce6 444 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 38 396 1.6E-27 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) SCD_RS01765 fcc007d91d6f776dbf5d4cce49371992 144 SUPERFAMILY SSF160387 61 118 1.7E-12 T 22-04-2016 SCD_RS01765 fcc007d91d6f776dbf5d4cce49371992 144 Pfam PF05573 NosL 17 114 2.2E-8 T 22-04-2016 IPR008719 Nitrous oxide reductase accessory protein NosL SCD_RS00250 08d49a7229a57e4ed70ece4d5b31464f 719 Pfam PF13361 UvrD-like helicase C-terminal domain 275 605 8.0E-69 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SCD_RS00250 08d49a7229a57e4ed70ece4d5b31464f 719 Gene3D G3DSA:3.40.50.300 284 385 1.1E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00250 08d49a7229a57e4ed70ece4d5b31464f 719 Gene3D G3DSA:3.40.50.300 541 631 1.1E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00250 08d49a7229a57e4ed70ece4d5b31464f 719 Gene3D G3DSA:1.10.486.10 386 530 5.1E-47 T 22-04-2016 SCD_RS00250 08d49a7229a57e4ed70ece4d5b31464f 719 PANTHER PTHR11070:SF7 1 715 2.2E-217 T 22-04-2016 SCD_RS00250 08d49a7229a57e4ed70ece4d5b31464f 719 PANTHER PTHR11070 1 715 2.2E-217 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SCD_RS00250 08d49a7229a57e4ed70ece4d5b31464f 719 Gene3D G3DSA:3.40.50.300 189 283 9.8E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00250 08d49a7229a57e4ed70ece4d5b31464f 719 Gene3D G3DSA:3.40.50.300 3 109 9.8E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00250 08d49a7229a57e4ed70ece4d5b31464f 719 SUPERFAMILY SSF52540 3 631 1.95E-178 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00250 08d49a7229a57e4ed70ece4d5b31464f 719 Gene3D G3DSA:1.10.10.160 113 188 3.0E-19 T 22-04-2016 IPR013986 DExx box DNA helicase domain SCD_RS00250 08d49a7229a57e4ed70ece4d5b31464f 719 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 269 2.4E-71 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SCD_RS07835 eb2f7e96d039c8901ea28e0605f7a2b1 204 Gene3D G3DSA:2.40.160.20 16 201 3.3E-34 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SCD_RS07835 eb2f7e96d039c8901ea28e0605f7a2b1 204 SUPERFAMILY SSF56925 25 201 7.85E-25 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SCD_RS07835 eb2f7e96d039c8901ea28e0605f7a2b1 204 Pfam PF01389 OmpA-like transmembrane domain 30 201 6.7E-22 T 22-04-2016 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 SCD_RS10685 42d80713d50d6097837f5c36f1abe389 184 PANTHER PTHR30529:SF5 1 180 6.9E-58 T 22-04-2016 SCD_RS10685 42d80713d50d6097837f5c36f1abe389 184 SUPERFAMILY SSF81342 2 176 4.87E-38 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SCD_RS10685 42d80713d50d6097837f5c36f1abe389 184 Pfam PF01292 Prokaryotic cytochrome b561 6 176 1.7E-30 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SCD_RS10685 42d80713d50d6097837f5c36f1abe389 184 PANTHER PTHR30529 1 180 6.9E-58 T 22-04-2016 SCD_RS08125 522612f751fd095c4b68f76ebc207f13 310 Gene3D G3DSA:3.40.50.150 23 151 1.3E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS08125 522612f751fd095c4b68f76ebc207f13 310 SUPERFAMILY SSF53335 33 289 1.12E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS08125 522612f751fd095c4b68f76ebc207f13 310 Pfam PF13649 Methyltransferase domain 63 148 1.2E-8 T 22-04-2016 SCD_RS13255 5621fa495c4191e932024061ce45bbdb 165 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS13860 f51c6b6938c163908d4a320d0f606bc5 351 Pfam PF06580 Histidine kinase 159 237 3.1E-22 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 SCD_RS13860 f51c6b6938c163908d4a320d0f606bc5 351 Gene3D G3DSA:3.30.565.10 209 291 2.0E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS13860 f51c6b6938c163908d4a320d0f606bc5 351 SUPERFAMILY SSF55874 215 295 1.07E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SCD_RS13860 f51c6b6938c163908d4a320d0f606bc5 351 PANTHER PTHR34220 19 351 3.9E-50 T 22-04-2016 SCD_RS08865 39db1c25f0b42a3ee962214e702ddaa9 101 SUPERFAMILY SSF50249 2 100 9.6E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS08865 39db1c25f0b42a3ee962214e702ddaa9 101 Gene3D G3DSA:2.40.50.140 2 100 3.9E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SCD_RS08865 39db1c25f0b42a3ee962214e702ddaa9 101 PIRSF PIRSF003135 1 99 6.7E-23 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 SCD_RS08865 39db1c25f0b42a3ee962214e702ddaa9 101 Hamap MF_00720 Primosomal replication protein n [priB]. 2 98 21.189 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 SCD_RS08865 39db1c25f0b42a3ee962214e702ddaa9 101 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 4 97 7.0E-32 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 SCD_RS09900 35e403a93b7d0a9bda6407866e02e0a4 108 PANTHER PTHR34583 1 105 8.3E-51 T 22-04-2016 SCD_RS09900 35e403a93b7d0a9bda6407866e02e0a4 108 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 103 1.7E-24 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SCD_RS09900 35e403a93b7d0a9bda6407866e02e0a4 108 PANTHER PTHR34583:SF1 1 105 8.3E-51 T 22-04-2016 SCD_RS01300 26207182d3caf52202d95d7553d4901a 199 Gene3D G3DSA:3.40.630.30 45 171 1.5E-6 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS01300 26207182d3caf52202d95d7553d4901a 199 SUPERFAMILY SSF55729 37 176 7.59E-7 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS01640 2057d0215bcdf888475de564d9c70426 166 Gene3D G3DSA:1.20.1550.10 4 164 4.9E-49 T 22-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain SCD_RS01640 2057d0215bcdf888475de564d9c70426 166 Pfam PF02600 Disulfide bond formation protein DsbB 6 156 4.8E-40 T 22-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 SCD_RS01640 2057d0215bcdf888475de564d9c70426 166 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 1 164 21.768 T 22-04-2016 IPR022920 Disulphide bond formation protein DsbB SCD_RS01640 2057d0215bcdf888475de564d9c70426 166 PANTHER PTHR36570 3 166 4.9E-36 T 22-04-2016 SCD_RS01640 2057d0215bcdf888475de564d9c70426 166 SUPERFAMILY SSF158442 9 157 6.8E-39 T 22-04-2016 SCD_RS00200 3b25e5705933a8eafc9ea58552ed73e2 78 Gene3D G3DSA:1.10.10.60 7 78 2.6E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS00200 3b25e5705933a8eafc9ea58552ed73e2 78 PIRSF PIRSF002097 1 78 1.3E-33 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 SCD_RS00200 3b25e5705933a8eafc9ea58552ed73e2 78 PANTHER PTHR32071 11 77 2.8E-15 T 22-04-2016 SCD_RS00200 3b25e5705933a8eafc9ea58552ed73e2 78 Pfam PF02954 Bacterial regulatory protein, Fis family 38 73 2.7E-14 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS00200 3b25e5705933a8eafc9ea58552ed73e2 78 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 41 58 9.9E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS00200 3b25e5705933a8eafc9ea58552ed73e2 78 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 58 78 9.9E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SCD_RS00200 3b25e5705933a8eafc9ea58552ed73e2 78 SUPERFAMILY SSF46689 10 77 2.22E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SCD_RS14200 e8552425d630e5c055cd45188e50301b 298 Pfam PF04932 O-Antigen ligase 69 223 1.4E-17 T 22-04-2016 IPR007016 O-antigen ligase-related SCD_RS04095 ca4067133a2ad035f33bef2fb5f12e3f 157 Pfam PF13508 Acetyltransferase (GNAT) domain 58 145 8.8E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SCD_RS04095 ca4067133a2ad035f33bef2fb5f12e3f 157 SUPERFAMILY SSF55729 1 150 3.71E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS04095 ca4067133a2ad035f33bef2fb5f12e3f 157 Gene3D G3DSA:3.40.630.30 6 143 2.6E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SCD_RS14570 e93898f386428e0069978db5fed11b84 163 Pfam PF04351 Pilus assembly protein, PilP 16 156 1.0E-49 T 22-04-2016 IPR007446 Pilus assembly protein PilP SCD_RS14570 e93898f386428e0069978db5fed11b84 163 PIRSF PIRSF016481 1 159 1.2E-41 T 22-04-2016 IPR007446 Pilus assembly protein PilP SCD_RS14290 41475e57b2167442fc0d1f1c5dfc5ae4 316 SUPERFAMILY SSF53448 2 252 1.34E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS14290 41475e57b2167442fc0d1f1c5dfc5ae4 316 PANTHER PTHR10859:SF86 3 306 4.1E-99 T 22-04-2016 SCD_RS14290 41475e57b2167442fc0d1f1c5dfc5ae4 316 PANTHER PTHR10859 3 306 4.1E-99 T 22-04-2016 SCD_RS14290 41475e57b2167442fc0d1f1c5dfc5ae4 316 Gene3D G3DSA:3.90.550.10 4 124 1.4E-22 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS14290 41475e57b2167442fc0d1f1c5dfc5ae4 316 Pfam PF00535 Glycosyl transferase family 2 9 141 3.9E-26 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SCD_RS01505 67d1d6acfa5a4d0ad26ee04765326450 102 Gene3D G3DSA:2.60.40.420 2 69 1.4E-7 T 22-04-2016 IPR008972 Cupredoxin SCD_RS01505 67d1d6acfa5a4d0ad26ee04765326450 102 Pfam PF13473 Cupredoxin-like domain 3 101 4.6E-29 T 22-04-2016 IPR028096 EfeO-type cupredoxin-like domain SCD_RS01505 67d1d6acfa5a4d0ad26ee04765326450 102 SUPERFAMILY SSF49503 5 100 8.51E-15 T 22-04-2016 IPR008972 Cupredoxin SCD_RS11905 77235879490c95ee0bed4b1b14e0c27f 275 SUPERFAMILY SSF46626 165 274 1.6E-27 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS11905 77235879490c95ee0bed4b1b14e0c27f 275 Gene3D G3DSA:1.10.760.10 100 273 1.9E-48 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS11905 77235879490c95ee0bed4b1b14e0c27f 275 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 72 275 8.3E-67 T 22-04-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 SCD_RS11905 77235879490c95ee0bed4b1b14e0c27f 275 PIRSF PIRSF038455 1 275 1.7E-80 T 22-04-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 SCD_RS11905 77235879490c95ee0bed4b1b14e0c27f 275 SUPERFAMILY SSF46626 45 161 2.98E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS00845 f2a440ba57291979e30c52577dfb5e98 305 Pfam PF04471 Restriction endonuclease 161 279 1.1E-34 T 22-04-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 SCD_RS00845 f2a440ba57291979e30c52577dfb5e98 305 PANTHER PTHR30015 2 305 2.6E-146 T 22-04-2016 SCD_RS00845 f2a440ba57291979e30c52577dfb5e98 305 SUPERFAMILY SSF52980 164 282 3.54E-15 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SCD_RS00845 f2a440ba57291979e30c52577dfb5e98 305 Pfam PF14338 Mrr N-terminal domain 6 91 1.7E-32 T 22-04-2016 IPR025745 Restriction system protein Mrr-like N-terminal domain SCD_RS00845 f2a440ba57291979e30c52577dfb5e98 305 PANTHER PTHR30015:SF5 2 305 2.6E-146 T 22-04-2016 SCD_RS00845 f2a440ba57291979e30c52577dfb5e98 305 Gene3D G3DSA:3.40.1350.10 152 282 3.9E-14 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 SCD_RS01440 5fdd187a4aa8271be37e70dcc30d2269 92 PANTHER PTHR40266 1 92 5.7E-32 T 22-04-2016 SCD_RS01440 5fdd187a4aa8271be37e70dcc30d2269 92 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 23 92 7.4E-18 T 22-04-2016 IPR007711 Toxin HigB-1 SCD_RS01440 5fdd187a4aa8271be37e70dcc30d2269 92 PANTHER PTHR40266:SF2 1 92 5.7E-32 T 22-04-2016 SCD_RS01440 5fdd187a4aa8271be37e70dcc30d2269 92 SUPERFAMILY SSF143011 1 92 5.76E-14 T 22-04-2016 SCD_RS03730 885e0738f12c624dc804e71f316beb23 78 Pfam PF00830 Ribosomal L28 family 3 62 4.6E-28 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 SCD_RS03730 885e0738f12c624dc804e71f316beb23 78 PANTHER PTHR13528 1 70 2.8E-35 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 SCD_RS03730 885e0738f12c624dc804e71f316beb23 78 Gene3D G3DSA:2.30.170.40 2 77 8.5E-38 T 22-04-2016 SCD_RS03730 885e0738f12c624dc804e71f316beb23 78 SUPERFAMILY SSF143800 2 76 1.47E-30 T 22-04-2016 SCD_RS03730 885e0738f12c624dc804e71f316beb23 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 1.3E-27 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03730 885e0738f12c624dc804e71f316beb23 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.319 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS06640 58d778d23cc65f221dbbaaf8d2ea2468 347 PANTHER PTHR12526 81 100 6.6E-35 T 22-04-2016 SCD_RS06640 58d778d23cc65f221dbbaaf8d2ea2468 347 PANTHER PTHR12526 120 343 6.6E-35 T 22-04-2016 SCD_RS06640 58d778d23cc65f221dbbaaf8d2ea2468 347 Pfam PF00534 Glycosyl transferases group 1 177 325 1.1E-26 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SCD_RS06640 58d778d23cc65f221dbbaaf8d2ea2468 347 Gene3D G3DSA:3.40.50.2000 177 326 1.7E-20 T 22-04-2016 SCD_RS06640 58d778d23cc65f221dbbaaf8d2ea2468 347 SUPERFAMILY SSF53756 130 342 5.83E-48 T 22-04-2016 SCD_RS02680 8c1b500598e418ec8e2d2cf5330203fb 253 PANTHER PTHR10953:SF145 186 232 1.5E-90 T 22-04-2016 SCD_RS02680 8c1b500598e418ec8e2d2cf5330203fb 253 PANTHER PTHR10953:SF145 7 160 1.5E-90 T 22-04-2016 SCD_RS02680 8c1b500598e418ec8e2d2cf5330203fb 253 Pfam PF00899 ThiF family 12 200 5.8E-36 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SCD_RS02680 8c1b500598e418ec8e2d2cf5330203fb 253 SUPERFAMILY SSF69572 7 240 5.49E-58 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SCD_RS02680 8c1b500598e418ec8e2d2cf5330203fb 253 Gene3D G3DSA:3.40.50.720 7 195 1.3E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain SCD_RS02680 8c1b500598e418ec8e2d2cf5330203fb 253 PANTHER PTHR10953 186 232 1.5E-90 T 22-04-2016 SCD_RS02680 8c1b500598e418ec8e2d2cf5330203fb 253 PANTHER PTHR10953 7 160 1.5E-90 T 22-04-2016 SCD_RS06775 be887d175f8f4aef70669bfdef5e6724 184 ProDom PD105539 COIL PRECURSOR AQ_678 COILED SIGNAL 13 181 2.0E-35 T 22-04-2016 SCD_RS04540 92a70792b0c58f417f4a39c0e76b3af0 94 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 11 79 1.1E-9 T 22-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 SCD_RS12810 abc4994f6f04a2d70252c47641490ac1 318 PANTHER PTHR30473 7 317 4.1E-159 T 22-04-2016 SCD_RS12810 abc4994f6f04a2d70252c47641490ac1 318 Gene3D G3DSA:3.40.50.300 110 312 3.1E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS12810 abc4994f6f04a2d70252c47641490ac1 318 Pfam PF02562 PhoH-like protein 110 312 4.5E-92 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 SCD_RS12810 abc4994f6f04a2d70252c47641490ac1 318 PANTHER PTHR30473:SF1 7 317 4.1E-159 T 22-04-2016 SCD_RS12810 abc4994f6f04a2d70252c47641490ac1 318 SUPERFAMILY SSF52540 108 287 1.38E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS02140 4df856f11189e5e9b81021d85d379b01 306 Pfam PF01136 Peptidase family U32 81 285 1.2E-20 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SCD_RS02140 4df856f11189e5e9b81021d85d379b01 306 PANTHER PTHR30217:SF8 1 293 1.5E-87 T 22-04-2016 SCD_RS02140 4df856f11189e5e9b81021d85d379b01 306 PANTHER PTHR30217 1 293 1.5E-87 T 22-04-2016 SCD_RS02760 f752e344e604abfc66a837bdc2ddd92a 108 Gene3D G3DSA:3.30.160.100 1 90 4.5E-35 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SCD_RS02760 f752e344e604abfc66a837bdc2ddd92a 108 SUPERFAMILY SSF69754 2 102 3.92E-34 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SCD_RS02760 f752e344e604abfc66a837bdc2ddd92a 108 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 90 5.3E-27 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SCD_RS02760 f752e344e604abfc66a837bdc2ddd92a 108 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 90 4.3E-31 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SCD_RS02760 f752e344e604abfc66a837bdc2ddd92a 108 PANTHER PTHR33231 1 90 4.3E-33 T 22-04-2016 SCD_RS06005 854b421cc09f66145a2d08a1223dd07b 308 SUPERFAMILY SSF56281 5 299 1.21E-57 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS06005 854b421cc09f66145a2d08a1223dd07b 308 SMART SM00849 53 237 2.7E-22 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS06005 854b421cc09f66145a2d08a1223dd07b 308 Gene3D G3DSA:3.60.15.10 21 261 4.6E-49 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS06005 854b421cc09f66145a2d08a1223dd07b 308 PANTHER PTHR11935 7 246 3.4E-24 T 22-04-2016 SCD_RS06005 854b421cc09f66145a2d08a1223dd07b 308 PANTHER PTHR11935:SF95 7 246 3.4E-24 T 22-04-2016 SCD_RS06005 854b421cc09f66145a2d08a1223dd07b 308 Pfam PF00753 Metallo-beta-lactamase superfamily 53 237 1.1E-23 T 22-04-2016 IPR001279 Metallo-beta-lactamase SCD_RS07180 ff49f2967d0eae9480a4133d54d56128 194 Gene3D G3DSA:1.10.357.10 5 193 6.1E-17 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SCD_RS07180 ff49f2967d0eae9480a4133d54d56128 194 SUPERFAMILY SSF48498 77 193 4.45E-16 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SCD_RS03325 8dea014c587be3ffdc7c3babea2a87ed 242 Gene3D G3DSA:3.30.70.980 135 205 4.5E-26 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 SCD_RS03325 8dea014c587be3ffdc7c3babea2a87ed 242 PANTHER PTHR12532 1 241 7.4E-114 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like SCD_RS03325 8dea014c587be3ffdc7c3babea2a87ed 242 PANTHER PTHR12532:SF0 1 241 7.4E-114 T 22-04-2016 SCD_RS03325 8dea014c587be3ffdc7c3babea2a87ed 242 Gene3D G3DSA:3.30.1270.10 212 241 1.7E-38 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 SCD_RS03325 8dea014c587be3ffdc7c3babea2a87ed 242 Gene3D G3DSA:3.30.1270.10 82 134 1.7E-38 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 SCD_RS03325 8dea014c587be3ffdc7c3babea2a87ed 242 Gene3D G3DSA:1.10.10.200 1 78 1.7E-37 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like SCD_RS03325 8dea014c587be3ffdc7c3babea2a87ed 242 Pfam PF01709 Transcriptional regulator 5 236 4.7E-96 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like SCD_RS03325 8dea014c587be3ffdc7c3babea2a87ed 242 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 36.596 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like SCD_RS03325 8dea014c587be3ffdc7c3babea2a87ed 242 SUPERFAMILY SSF75625 3 241 4.32E-97 T 22-04-2016 IPR029072 YebC-like SCD_RS03325 8dea014c587be3ffdc7c3babea2a87ed 242 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 235 1.0E-97 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like SCD_RS04120 995d09dcf1ddd132fd71ee0259b0e923 151 PANTHER PTHR10681 19 149 2.1E-26 T 22-04-2016 SCD_RS04120 995d09dcf1ddd132fd71ee0259b0e923 151 SUPERFAMILY SSF52833 18 149 1.38E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS04120 995d09dcf1ddd132fd71ee0259b0e923 151 Gene3D G3DSA:3.40.30.10 18 149 4.9E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS04120 995d09dcf1ddd132fd71ee0259b0e923 151 Pfam PF00578 AhpC/TSA family 18 131 1.1E-21 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SCD_RS04120 995d09dcf1ddd132fd71ee0259b0e923 151 PANTHER PTHR10681:SF125 19 149 2.1E-26 T 22-04-2016 SCD_RS04120 995d09dcf1ddd132fd71ee0259b0e923 151 ProSitePatterns PS00194 Thioredoxin family active site. 43 61 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SCD_RS14815 77ff354526fe9dab43ca272b285b5776 305 Pfam PF01464 Transglycosylase SLT domain 164 261 2.5E-27 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 SCD_RS14815 77ff354526fe9dab43ca272b285b5776 305 SUPERFAMILY SSF81901 36 116 4.32E-18 T 22-04-2016 SCD_RS14815 77ff354526fe9dab43ca272b285b5776 305 Gene3D G3DSA:1.25.40.10 34 119 3.2E-20 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS14815 77ff354526fe9dab43ca272b285b5776 305 Pfam PF08238 Sel1 repeat 41 75 0.046 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS14815 77ff354526fe9dab43ca272b285b5776 305 Pfam PF08238 Sel1 repeat 78 112 3.9E-7 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS14815 77ff354526fe9dab43ca272b285b5776 305 SMART SM00671 77 112 1.3E-9 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS14815 77ff354526fe9dab43ca272b285b5776 305 SMART SM00671 41 76 3.6E-7 T 22-04-2016 IPR006597 Sel1-like repeat SCD_RS14815 77ff354526fe9dab43ca272b285b5776 305 Gene3D G3DSA:1.10.530.10 162 280 1.9E-43 T 22-04-2016 SCD_RS14815 77ff354526fe9dab43ca272b285b5776 305 PANTHER PTHR21666 145 279 4.0E-36 T 22-04-2016 SCD_RS14815 77ff354526fe9dab43ca272b285b5776 305 SUPERFAMILY SSF53955 159 280 1.44E-42 T 22-04-2016 IPR023346 Lysozyme-like domain SCD_RS05430 910125b1bb04d9f6acc90a6d6fc302ee 346 PIRSF PIRSF015283 1 344 7.9E-91 T 22-04-2016 IPR016631 Regulatory, RpfE SCD_RS05430 910125b1bb04d9f6acc90a6d6fc302ee 346 Pfam PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 96 192 1.1E-4 T 22-04-2016 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GO:0003824|GO:0046537 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SCD_RS01145 c12673d7d6ca3a45aaa18023e834d00f 228 Pfam PF08721 TnsA endonuclease C terminal 138 212 1.0E-7 T 22-04-2016 IPR014832 TnsA endonuclease C-terminal SCD_RS01145 c12673d7d6ca3a45aaa18023e834d00f 228 Pfam PF08722 TnsA endonuclease N terminal 40 135 1.1E-10 T 22-04-2016 IPR014833 TnsA endonuclease, N-terminal SCD_RS11100 a6303980c21c36c139438ed93e726fa2 328 Pfam PF10282 Lactonase, 7-bladed beta-propeller 166 264 1.9E-7 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 SCD_RS11100 a6303980c21c36c139438ed93e726fa2 328 SUPERFAMILY SSF51004 24 321 4.19E-58 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain SCD_RS11100 a6303980c21c36c139438ed93e726fa2 328 Gene3D G3DSA:2.130.10.10 31 325 2.4E-47 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SCD_RS11100 a6303980c21c36c139438ed93e726fa2 328 PANTHER PTHR13833 84 288 1.0E-26 T 22-04-2016 SCD_RS08360 6cc1051c6749aa3ef767fc140d8c00f0 238 PANTHER PTHR24220 12 231 1.3E-112 T 22-04-2016 SCD_RS08360 6cc1051c6749aa3ef767fc140d8c00f0 238 SUPERFAMILY SSF52540 10 229 9.09E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08360 6cc1051c6749aa3ef767fc140d8c00f0 238 SMART SM00382 39 229 2.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SCD_RS08360 6cc1051c6749aa3ef767fc140d8c00f0 238 Gene3D G3DSA:3.40.50.300 9 228 8.4E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS08360 6cc1051c6749aa3ef767fc140d8c00f0 238 Pfam PF00005 ABC transporter 30 178 4.7E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SCD_RS08360 6cc1051c6749aa3ef767fc140d8c00f0 238 PANTHER PTHR24220:SF578 12 231 1.3E-112 T 22-04-2016 SCD_RS08360 6cc1051c6749aa3ef767fc140d8c00f0 238 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SCD_RS03520 59a1471f36f617dad801c93b7aa5c4de 339 Pfam PF07603 Protein of unknown function (DUF1566) 219 332 1.7E-21 T 22-04-2016 IPR011460 Protein of unknown function DUF1566 SCD_RS03520 59a1471f36f617dad801c93b7aa5c4de 339 Pfam PF07603 Protein of unknown function (DUF1566) 51 167 4.9E-25 T 22-04-2016 IPR011460 Protein of unknown function DUF1566 SCD_RS07875 4c9e7c5486439d705d0b867878457e64 165 PANTHER PTHR30373 15 165 5.0E-65 T 22-04-2016 SCD_RS07875 4c9e7c5486439d705d0b867878457e64 165 PANTHER PTHR30373:SF3 15 165 5.0E-65 T 22-04-2016 SCD_RS07875 4c9e7c5486439d705d0b867878457e64 165 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 21 141 2.3E-14 T 22-04-2016 IPR007621 TPM domain SCD_RS06285 e3edc3bb6ba01836a7013b5c7fbefdd1 246 Pfam PF01618 MotA/TolQ/ExbB proton channel family 101 219 9.0E-26 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SCD_RS06285 e3edc3bb6ba01836a7013b5c7fbefdd1 246 PANTHER PTHR30433 2 245 1.6E-102 T 22-04-2016 SCD_RS06285 e3edc3bb6ba01836a7013b5c7fbefdd1 246 PANTHER PTHR30433:SF3 2 245 1.6E-102 T 22-04-2016 IPR022522 Flagellar motor stator, MotA SCD_RS01450 7fd3f00546a1de7257dd6f316e329060 84 Pfam PF10387 Protein of unknown function (DUF2442) 10 74 1.6E-8 T 22-04-2016 IPR018841 Protein of unknown function DUF2442 SCD_RS07075 a2bf13646458c4f41c5e2a36bf4307d5 91 Gene3D G3DSA:3.40.1620.10 1 42 7.6E-10 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SCD_RS07075 a2bf13646458c4f41c5e2a36bf4307d5 91 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 44 6.4E-9 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SCD_RS07075 a2bf13646458c4f41c5e2a36bf4307d5 91 SUPERFAMILY SSF143120 1 47 1.83E-11 T 22-04-2016 SCD_RS07075 a2bf13646458c4f41c5e2a36bf4307d5 91 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 49 5.5E-12 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SCD_RS13805 72acbb7119a65e94287959de91fc8ab7 108 Gene3D G3DSA:3.30.70.830 2 104 1.6E-40 T 22-04-2016 SCD_RS13805 72acbb7119a65e94287959de91fc8ab7 108 Pfam PF03091 CutA1 divalent ion tolerance protein 4 101 8.5E-37 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 SCD_RS13805 72acbb7119a65e94287959de91fc8ab7 108 SUPERFAMILY SSF54913 2 103 4.82E-38 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SCD_RS13805 72acbb7119a65e94287959de91fc8ab7 108 PANTHER PTHR23419 4 108 2.3E-39 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 SCD_RS10470 84f4828b1a3206de5834c84994d38acf 130 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 17 128 1.2E-14 T 22-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III SCD_RS03630 6c8f0e213fda8002336d4d63a4ee0c19 316 SUPERFAMILY SSF48452 215 314 8.6E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS03630 6c8f0e213fda8002336d4d63a4ee0c19 316 Pfam PF13432 Tetratricopeptide repeat 237 293 5.2E-11 T 22-04-2016 SCD_RS03630 6c8f0e213fda8002336d4d63a4ee0c19 316 Gene3D G3DSA:1.25.40.10 214 295 7.0E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS03630 6c8f0e213fda8002336d4d63a4ee0c19 316 Pfam PF13529 Peptidase_C39 like family 46 156 1.2E-9 T 22-04-2016 SCD_RS03630 6c8f0e213fda8002336d4d63a4ee0c19 316 SMART SM00028 232 265 12.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS03630 6c8f0e213fda8002336d4d63a4ee0c19 316 SMART SM00028 266 299 4.3 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS03115 5c558f68fca705a56706b1007abd726c 92 Pfam PF00276 Ribosomal protein L23 2 88 3.1E-30 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SCD_RS03115 5c558f68fca705a56706b1007abd726c 92 Gene3D G3DSA:3.30.70.330 1 90 7.0E-32 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 SCD_RS03115 5c558f68fca705a56706b1007abd726c 92 SUPERFAMILY SSF54189 1 91 8.99E-29 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 SCD_RS03115 5c558f68fca705a56706b1007abd726c 92 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 1 91 21.963 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SCD_RS03115 5c558f68fca705a56706b1007abd726c 92 PANTHER PTHR11620 1 89 2.3E-21 T 22-04-2016 SCD_RS02985 e6517e646f58ff5c0e8bb60d87a183cc 197 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 191 7.6E-71 T 22-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 SCD_RS02985 e6517e646f58ff5c0e8bb60d87a183cc 197 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 4 40 2.7E-11 T 22-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 SCD_RS02985 e6517e646f58ff5c0e8bb60d87a183cc 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 150 162 1.5E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SCD_RS02985 e6517e646f58ff5c0e8bb60d87a183cc 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 163 175 1.5E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SCD_RS02985 e6517e646f58ff5c0e8bb60d87a183cc 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 1.5E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SCD_RS02985 e6517e646f58ff5c0e8bb60d87a183cc 197 SUPERFAMILY SSF50022 31 190 1.68E-40 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SCD_RS02985 e6517e646f58ff5c0e8bb60d87a183cc 197 Pfam PF00355 Rieske [2Fe-2S] domain 93 178 3.0E-10 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SCD_RS02985 e6517e646f58ff5c0e8bb60d87a183cc 197 Gene3D G3DSA:2.102.10.10 6 192 1.4E-42 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SCD_RS09735 7de437a29530b4456f87615988ee5f20 160 PIRSF PIRSF004923 8 158 5.8E-24 T 22-04-2016 IPR026268 Protein RseC SCD_RS09735 7de437a29530b4456f87615988ee5f20 160 PANTHER PTHR35867:SF1 9 154 2.1E-17 T 22-04-2016 SCD_RS09735 7de437a29530b4456f87615988ee5f20 160 PANTHER PTHR35867 9 154 2.1E-17 T 22-04-2016 SCD_RS09735 7de437a29530b4456f87615988ee5f20 160 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 15 149 5.9E-29 T 22-04-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC SCD_RS02410 d1ae06f16c72af249a25c18d98582551 400 Pfam PF00999 Sodium/hydrogen exchanger family 7 378 6.3E-12 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SCD_RS13970 6c270e1a65d5715910818c3a796e99e5 512 SUPERFAMILY SSF56935 366 491 6.23E-12 T 22-04-2016 SCD_RS13970 6c270e1a65d5715910818c3a796e99e5 512 SUPERFAMILY SSF56935 126 335 6.23E-12 T 22-04-2016 SCD_RS13970 6c270e1a65d5715910818c3a796e99e5 512 Gene3D G3DSA:2.40.160.10 126 510 8.7E-6 T 22-04-2016 IPR023614 Porin domain SCD_RS13970 6c270e1a65d5715910818c3a796e99e5 512 Pfam PF16930 Putative porin 34 512 5.7E-171 T 22-04-2016 IPR032638 Putative bacterial porin SCD_RS02185 39b9d69656204226cef3b21beb3fcf5c 77 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 5 73 7.7E-23 T 22-04-2016 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system SCD_RS06675 4a46d5e33e93b99e9a4ba9002591a747 276 SUPERFAMILY SSF53448 1 147 1.69E-22 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS06675 4a46d5e33e93b99e9a4ba9002591a747 276 PANTHER PTHR10859 1 100 2.7E-14 T 22-04-2016 SCD_RS06675 4a46d5e33e93b99e9a4ba9002591a747 276 Pfam PF00535 Glycosyl transferase family 2 3 146 9.4E-15 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SCD_RS06675 4a46d5e33e93b99e9a4ba9002591a747 276 PANTHER PTHR10859:SF99 1 100 2.7E-14 T 22-04-2016 SCD_RS06675 4a46d5e33e93b99e9a4ba9002591a747 276 Gene3D G3DSA:3.90.550.10 2 117 2.0E-10 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS12885 e80e77a0ef774958c9de062d3702f5cf 511 Pfam PF00916 Sulfate permease family 18 367 3.5E-50 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 SCD_RS12885 e80e77a0ef774958c9de062d3702f5cf 511 Gene3D G3DSA:3.30.750.24 407 490 6.2E-11 T 22-04-2016 IPR002645 STAS domain SCD_RS12885 e80e77a0ef774958c9de062d3702f5cf 511 SUPERFAMILY SSF52091 407 488 5.69E-12 T 22-04-2016 IPR002645 STAS domain SCD_RS12885 e80e77a0ef774958c9de062d3702f5cf 511 PANTHER PTHR11814:SF76 18 476 1.7E-165 T 22-04-2016 SCD_RS12885 e80e77a0ef774958c9de062d3702f5cf 511 PANTHER PTHR11814 18 476 1.7E-165 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 SCD_RS15840 00a54f8bdfd97e477d81a72ed9a1f577 91 SUPERFAMILY SSF52540 24 76 1.97E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS15840 00a54f8bdfd97e477d81a72ed9a1f577 91 Gene3D G3DSA:3.40.50.300 22 77 6.5E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS00820 65683a869b4c84ed2b4bdbcb72ad8e0f 166 Pfam PF04214 Protein of unknown function, DUF 58 121 8.3E-26 T 22-04-2016 IPR007332 Protein of unknown function DUF411 SCD_RS07765 bff6a9068a0635a0cc9390e0eab99944 446 Pfam PF02646 RmuC family 148 427 5.9E-65 T 22-04-2016 IPR003798 DNA recombination RmuC SCD_RS07765 bff6a9068a0635a0cc9390e0eab99944 446 PANTHER PTHR30563 27 428 1.5E-76 T 22-04-2016 SCD_RS11685 35398aeecbe63f6bbb800a49c46f38ff 183 Pfam PF12276 Protein of unknown function (DUF3617) 14 148 4.5E-12 T 22-04-2016 IPR022061 Protein of unknown function DUF3617 SCD_RS07345 fabb3e21125c0e5f84cc670a54fd6ebd 268 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 243 265 2.4E-5 T 22-04-2016 IPR013424 PEP-CTERM protein-sorting domain SCD_RS07345 fabb3e21125c0e5f84cc670a54fd6ebd 268 Pfam PF07589 PEP-CTERM motif 242 264 6.5E-6 T 22-04-2016 IPR013424 PEP-CTERM protein-sorting domain SCD_RS14295 d8b7e739b66544da5a3fd46eb86debe7 244 Gene3D G3DSA:3.40.50.150 25 131 7.3E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS14295 d8b7e739b66544da5a3fd46eb86debe7 244 Pfam PF08241 Methyltransferase domain 44 117 1.6E-11 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SCD_RS14295 d8b7e739b66544da5a3fd46eb86debe7 244 SUPERFAMILY SSF53335 32 140 4.85E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SCD_RS14295 d8b7e739b66544da5a3fd46eb86debe7 244 PANTHER PTHR10108 40 128 5.0E-12 T 22-04-2016 SCD_RS13540 2213222de2a530dcd09e055be32f72a9 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 45 2.0E-13 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 SCD_RS13540 2213222de2a530dcd09e055be32f72a9 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 50 1.2E-11 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 SCD_RS11270 84fa721bf3b441bf3b2926b8c31b0254 458 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 372 450 2.7E-6 T 22-04-2016 IPR032388 Flagellar assembly protein T, C-terminal SCD_RS04530 8c24163c13b2dc0d9979d3133b843836 128 SMART SM00748 12 121 0.0073 T 22-04-2016 IPR007842 HEPN domain SCD_RS04530 8c24163c13b2dc0d9979d3133b843836 128 SUPERFAMILY SSF81593 11 124 5.49E-13 T 22-04-2016 SCD_RS04530 8c24163c13b2dc0d9979d3133b843836 128 Gene3D G3DSA:1.20.120.330 6 117 4.9E-17 T 22-04-2016 SCD_RS04530 8c24163c13b2dc0d9979d3133b843836 128 Pfam PF05168 HEPN domain 10 116 1.7E-14 T 22-04-2016 IPR007842 HEPN domain SCD_RS15485 5cb7632cb29fc64d58b6181a6e5c98a6 422 Pfam PF06527 TniQ 2 116 1.6E-15 T 22-04-2016 IPR009492 TniQ SCD_RS14985 2d4d2472857977dd1477ecae3403786d 122 Pfam PF03899 ATP synthase I chain 8 104 1.3E-7 T 22-04-2016 IPR005598 ATP synthase protein I SCD_RS12125 e61f7266f1a0b741cca2194f152adffe 207 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 197 19.172 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SCD_RS12125 e61f7266f1a0b741cca2194f152adffe 207 PANTHER PTHR30309 1 198 4.8E-65 T 22-04-2016 SCD_RS12125 e61f7266f1a0b741cca2194f152adffe 207 PANTHER PTHR30309:SF0 1 198 4.8E-65 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SCD_RS12125 e61f7266f1a0b741cca2194f152adffe 207 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 197 2.4E-56 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SCD_RS12125 e61f7266f1a0b741cca2194f152adffe 207 Pfam PF02660 Glycerol-3-phosphate acyltransferase 10 188 5.5E-47 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SCD_RS12125 e61f7266f1a0b741cca2194f152adffe 207 SMART SM01207 8 189 6.9E-78 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SCD_RS02360 f8306c85959fab46758d3965dd8429d1 202 SUPERFAMILY SSF81342 1 169 3.69E-34 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SCD_RS02360 f8306c85959fab46758d3965dd8429d1 202 Pfam PF01292 Prokaryotic cytochrome b561 6 167 5.8E-25 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SCD_RS02360 f8306c85959fab46758d3965dd8429d1 202 Gene3D G3DSA:1.20.950.20 28 169 1.7E-7 T 22-04-2016 SCD_RS12055 38aaa3fd8d5559f8be0e7e69fbca38e0 208 PANTHER PTHR30462 6 208 4.8E-55 T 22-04-2016 SCD_RS12055 38aaa3fd8d5559f8be0e7e69fbca38e0 208 PANTHER PTHR30462:SF3 6 208 4.8E-55 T 22-04-2016 SCD_RS12055 38aaa3fd8d5559f8be0e7e69fbca38e0 208 Pfam PF04403 Paraquat-inducible protein A 48 202 7.1E-55 T 22-04-2016 IPR007498 Paraquat-inducible protein A SCD_RS14120 3556913cc860c9b65cbe173b49a4d00c 264 PANTHER PTHR30269 1 263 1.1E-87 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SCD_RS14120 3556913cc860c9b65cbe173b49a4d00c 264 PANTHER PTHR30269:SF18 1 263 1.1E-87 T 22-04-2016 SCD_RS14120 3556913cc860c9b65cbe173b49a4d00c 264 Pfam PF01925 Sulfite exporter TauE/SafE 8 259 1.2E-54 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SCD_RS04080 78b0009ca346600a53d24caea6e2721b 218 Pfam PF02666 Phosphatidylserine decarboxylase 44 210 1.4E-31 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 SCD_RS04080 78b0009ca346600a53d24caea6e2721b 218 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 8 212 1.0E-68 T 22-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 SCD_RS04080 78b0009ca346600a53d24caea6e2721b 218 PANTHER PTHR35809 1 217 1.5E-66 T 22-04-2016 SCD_RS04080 78b0009ca346600a53d24caea6e2721b 218 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 8 214 37.972 T 22-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 SCD_RS13435 c26001bf3cfae3a4d78d43091cab95ea 119 SUPERFAMILY SSF75169 1 117 2.69E-40 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS13435 c26001bf3cfae3a4d78d43091cab95ea 119 Gene3D G3DSA:3.40.1260.10 1 117 2.3E-35 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS13435 c26001bf3cfae3a4d78d43091cab95ea 119 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 2 117 2.0E-47 T 22-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 SCD_RS13435 c26001bf3cfae3a4d78d43091cab95ea 119 Pfam PF02635 DsrE/DsrF-like family 1 117 1.3E-34 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein SCD_RS10465 4fd94d3a801085acc3fabc02f4dd4729 99 Pfam PF13997 YqjK-like protein 17 89 1.5E-16 T 22-04-2016 IPR025612 YqjK-like protein SCD_RS01415 8d3678057dfafaa863d024ad4c679ca1 204 PANTHER PTHR38693:SF1 13 204 3.2E-19 T 22-04-2016 SCD_RS01415 8d3678057dfafaa863d024ad4c679ca1 204 PANTHER PTHR38693 13 204 3.2E-19 T 22-04-2016 SCD_RS07160 f76d542c080f35e531758ab78eda5873 195 Gene3D G3DSA:1.10.357.10 54 167 6.4E-14 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SCD_RS07160 f76d542c080f35e531758ab78eda5873 195 SUPERFAMILY SSF48498 76 182 1.95E-12 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SCD_RS02260 7b8aabd6aa8b877be7114f91d0f9d8d2 95 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 17 83 3.4E-11 T 22-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 SCD_RS05185 882e8e3d2ea734416b5e8a2457387a87 140 Pfam PF07027 Protein of unknown function (DUF1318) 42 140 1.2E-25 T 22-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 SCD_RS05185 882e8e3d2ea734416b5e8a2457387a87 140 PIRSF PIRSF025560 7 140 1.2E-29 T 22-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 SCD_RS03455 da64569e25f76b118cda90b8e4b2bc6c 268 TIGRFAM TIGR03321 alt_F1F0_F0_B: alternate F1F0 ATPase, F0 subunit B 1 244 1.8E-99 T 22-04-2016 IPR017707 Alternate F1F0 ATPase, F0 subunit B SCD_RS03455 da64569e25f76b118cda90b8e4b2bc6c 268 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 157 11.272 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SCD_RS03455 da64569e25f76b118cda90b8e4b2bc6c 268 PANTHER PTHR33445 1 163 8.2E-29 T 22-04-2016 SCD_RS03455 da64569e25f76b118cda90b8e4b2bc6c 268 Pfam PF00213 ATP synthase delta (OSCP) subunit 178 243 8.6E-5 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SCD_RS03455 da64569e25f76b118cda90b8e4b2bc6c 268 Pfam PF00430 ATP synthase B/B' CF(0) 7 137 1.6E-14 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SCD_RS05905 70697226198a335b381ec77313dc0746 98 Pfam PF14090 Helix-turn-helix domain 28 94 1.0E-23 T 22-04-2016 SCD_RS04915 da4328470bfb1a0a352c800ed4a8be1f 177 PANTHER PTHR10681 3 171 3.8E-57 T 22-04-2016 SCD_RS04915 da4328470bfb1a0a352c800ed4a8be1f 177 SUPERFAMILY SSF52833 26 174 3.05E-52 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS04915 da4328470bfb1a0a352c800ed4a8be1f 177 PIRSF PIRSF000239 23 177 7.4E-32 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 SCD_RS04915 da4328470bfb1a0a352c800ed4a8be1f 177 Gene3D G3DSA:3.40.30.10 21 174 5.1E-52 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS04915 da4328470bfb1a0a352c800ed4a8be1f 177 Pfam PF00578 AhpC/TSA family 29 153 6.0E-41 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SCD_RS09455 787ffa7dcb0e7126cb55b25eece26fb8 336 Gene3D G3DSA:3.20.20.210 1 334 3.0E-66 T 22-04-2016 SCD_RS09455 787ffa7dcb0e7126cb55b25eece26fb8 336 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 4 334 2.2E-66 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SCD_RS09455 787ffa7dcb0e7126cb55b25eece26fb8 336 SUPERFAMILY SSF51726 1 334 1.92E-55 T 22-04-2016 SCD_RS00835 c09b3e97722f6acea93d1dbbb59f38f4 416 Pfam PF04892 VanZ like family 54 134 2.9E-11 T 22-04-2016 IPR006976 VanZ-like SCD_RS14560 28f9c123cf70e7c2621def918c980b90 200 Pfam PF05137 Fimbrial assembly protein (PilN) 101 177 1.7E-24 T 22-04-2016 IPR007813 Fimbrial assembly PilN SCD_RS14560 28f9c123cf70e7c2621def918c980b90 200 PANTHER PTHR40278 1 194 1.4E-44 T 22-04-2016 SCD_RS14560 28f9c123cf70e7c2621def918c980b90 200 PANTHER PTHR40278:SF1 1 194 1.4E-44 T 22-04-2016 SCD_RS06480 95dd70b694cc83484596357ade36ed52 617 Pfam PF13205 Bacterial Ig-like domain 324 430 1.2E-13 T 22-04-2016 IPR032812 SbsA, Ig-like domain SCD_RS06480 95dd70b694cc83484596357ade36ed52 617 Pfam PF13205 Bacterial Ig-like domain 224 319 8.5E-11 T 22-04-2016 IPR032812 SbsA, Ig-like domain SCD_RS08135 46463eb887bda3e70f7ba58d98a9ac1f 353 Pfam PF02120 Flagellar hook-length control protein FliK 282 350 3.0E-14 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal SCD_RS13565 e1bada27738d7b90e87228fd74aeedec 157 Pfam PF01925 Sulfite exporter TauE/SafE 11 81 3.3E-7 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SCD_RS13365 be8493725a4b3ad605be0bec0b8a88e4 311 SUPERFAMILY SSF103190 39 142 9.42E-10 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SCD_RS13365 be8493725a4b3ad605be0bec0b8a88e4 311 Gene3D G3DSA:3.30.450.20 37 137 2.5E-7 T 22-04-2016 SCD_RS12450 575b89ff1039c3b56c9ecd41a5ecd387 136 PANTHER PTHR35024 5 127 3.0E-24 T 22-04-2016 SCD_RS12450 575b89ff1039c3b56c9ecd41a5ecd387 136 PANTHER PTHR35024:SF2 5 127 3.0E-24 T 22-04-2016 SCD_RS12450 575b89ff1039c3b56c9ecd41a5ecd387 136 Pfam PF04519 Polymer-forming cytoskeletal 17 117 6.4E-26 T 22-04-2016 IPR007607 Protein of unknown function DUF583 SCD_RS04975 46637c81bbf543de893dca7f4ed25e37 91 SUPERFAMILY SSF143011 1 91 1.16E-16 T 22-04-2016 SCD_RS03200 c18892ba30c64b0096c23c871415df5a 146 SUPERFAMILY SSF52080 4 145 4.19E-44 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P SCD_RS03200 c18892ba30c64b0096c23c871415df5a 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 144 4.3E-46 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 SCD_RS03200 c18892ba30c64b0096c23c871415df5a 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 145 5.5E-29 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P SCD_RS03200 c18892ba30c64b0096c23c871415df5a 146 PANTHER PTHR12934 1 146 2.6E-64 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 SCD_RS03200 c18892ba30c64b0096c23c871415df5a 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 145 19.026 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 SCD_RS03200 c18892ba30c64b0096c23c871415df5a 146 Gene3D G3DSA:3.100.10.10 32 145 2.9E-24 T 22-04-2016 SCD_RS13070 8c5a9921069200dff3843faaddc0658f 68 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 4 47 9.2E-15 T 22-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type SCD_RS13070 8c5a9921069200dff3843faaddc0658f 68 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 4 46 8.5E-19 T 22-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type SCD_RS11550 c4feb9dff9d7c57520b43222b9602b54 569 SMART SM01080 52 355 1.1E-61 T 22-04-2016 IPR007890 CHASE2 SCD_RS11550 c4feb9dff9d7c57520b43222b9602b54 569 Pfam PF05226 CHASE2 domain 40 353 1.8E-56 T 22-04-2016 IPR007890 CHASE2 SCD_RS10360 71034ef20a39f16be0d3dba4aa73d149 87 Pfam PF04193 PQ loop repeat 5 59 6.1E-11 T 22-04-2016 IPR006603 PQ-loop repeat SCD_RS14470 1771b4f88dd0f1f0f370385050ac3865 172 Pfam PF01584 CheW-like domain 32 162 4.4E-15 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SCD_RS14470 1771b4f88dd0f1f0f370385050ac3865 172 SUPERFAMILY SSF50341 27 165 3.27E-20 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SCD_RS15790 56bb0cf28ba54e1b3d0596f2070d66f3 137 Pfam PF16537 Type II secretion system protein B 77 133 3.5E-19 T 22-04-2016 IPR032389 Type II secretion system protein B SCD_RS15640 ec4715654ec4981ac5d402a322ae37ab 343 PANTHER PTHR37533 207 343 2.6E-35 T 22-04-2016 SCD_RS15640 ec4715654ec4981ac5d402a322ae37ab 343 Pfam PF02120 Flagellar hook-length control protein FliK 217 300 1.2E-22 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal SCD_RS11865 74f5780448b8945354667fb720224004 368 Pfam PF01757 Acyltransferase family 3 337 1.6E-18 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 SCD_RS05675 e59beeda4a06a6bfb075a5f1cad0a8ec 141 Pfam PF05433 Glycine zipper 2TM domain 97 136 3.1E-9 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 SCD_RS06515 86cd87080d94fa1a79544c6eb96274f1 297 Gene3D G3DSA:2.30.42.10 228 295 4.9E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS06515 86cd87080d94fa1a79544c6eb96274f1 297 Pfam PF11356 Type II secretion system protein C 44 170 2.7E-27 T 22-04-2016 IPR024961 Type II secretion system protein C, N-terminal SCD_RS06515 86cd87080d94fa1a79544c6eb96274f1 297 SUPERFAMILY SSF50156 203 294 6.18E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SCD_RS04035 3bf0c6c0a0354355e03154969e295972 371 PANTHER PTHR33529 1 371 1.1E-64 T 22-04-2016 SCD_RS04035 3bf0c6c0a0354355e03154969e295972 371 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 347 1.3E-62 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 SCD_RS04035 3bf0c6c0a0354355e03154969e295972 371 PANTHER PTHR33529:SF2 1 371 1.1E-64 T 22-04-2016 SCD_RS04035 3bf0c6c0a0354355e03154969e295972 371 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 347 4.3E-113 T 22-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 SCD_RS14480 3a1d569ecf139faa0567abb18d6a4c58 121 PANTHER PTHR26402 1 115 2.4E-69 T 22-04-2016 SCD_RS14480 3a1d569ecf139faa0567abb18d6a4c58 121 PANTHER PTHR26402:SF568 1 115 2.4E-69 T 22-04-2016 SCD_RS14480 3a1d569ecf139faa0567abb18d6a4c58 121 Gene3D G3DSA:3.40.50.2300 1 119 7.6E-35 T 22-04-2016 SCD_RS14480 3a1d569ecf139faa0567abb18d6a4c58 121 Pfam PF00072 Response regulator receiver domain 1 111 9.4E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS14480 3a1d569ecf139faa0567abb18d6a4c58 121 SUPERFAMILY SSF52172 1 118 2.85E-34 T 22-04-2016 IPR011006 CheY-like superfamily SCD_RS14480 3a1d569ecf139faa0567abb18d6a4c58 121 SMART SM00448 1 111 7.3E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SCD_RS00745 fcd49ef839c0fa215bdb30122fa79e90 199 PIRSF PIRSF020606 1 196 1.8E-77 T 22-04-2016 IPR014509 Uncharacterised conserved protein UCP020606 SCD_RS00745 fcd49ef839c0fa215bdb30122fa79e90 199 Pfam PF09997 Predicted membrane protein (DUF2238) 34 174 1.9E-58 T 22-04-2016 IPR014509 Uncharacterised conserved protein UCP020606 SCD_RS14305 818f6fb1381df70f9ee5bcef305de74d 321 PANTHER PTHR40277 1 312 7.5E-41 T 22-04-2016 SCD_RS14305 818f6fb1381df70f9ee5bcef305de74d 321 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 21 177 6.8E-15 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD SCD_RS14305 818f6fb1381df70f9ee5bcef305de74d 321 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 17 299 1.1E-44 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD SCD_RS01490 ea0846720c136723c89330bddf4321aa 160 Pfam PF09719 Putative redox-active protein (C_GCAxxG_C_C) 26 159 1.2E-24 T 22-04-2016 IPR010181 CGCAxxGCC motif SCD_RS03405 c9139b7e06cc39d312fae64df603639f 157 Pfam PF08909 Domain of unknown function (DUF1854) 27 156 1.2E-52 T 22-04-2016 IPR015005 Domain of unknown function DUF1854 SCD_RS06075 4c12a44766482efd4c87487339fe3115 106 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 3 106 9.1E-26 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SCD_RS06075 4c12a44766482efd4c87487339fe3115 106 Pfam PF02049 Flagellar hook-basal body complex protein FliE 20 106 8.5E-32 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SCD_RS06075 4c12a44766482efd4c87487339fe3115 106 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 5 106 18.618 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SCD_RS06075 4c12a44766482efd4c87487339fe3115 106 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 35 51 9.7E-16 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SCD_RS06075 4c12a44766482efd4c87487339fe3115 106 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 70 86 9.7E-16 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SCD_RS06075 4c12a44766482efd4c87487339fe3115 106 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 91 104 9.7E-16 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SCD_RS06075 4c12a44766482efd4c87487339fe3115 106 PANTHER PTHR34653 1 106 2.0E-23 T 22-04-2016 SCD_RS08120 3b6e1e162fac1dfd66ffdc280d553085 405 SUPERFAMILY SSF56059 213 373 1.41E-14 T 22-04-2016 SCD_RS08120 3b6e1e162fac1dfd66ffdc280d553085 405 Gene3D G3DSA:3.30.1490.20 214 265 7.5E-4 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SCD_RS11650 079cf7f96189434a908b85fc67a7e879 355 PANTHER PTHR21716 6 354 1.6E-63 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SCD_RS11650 079cf7f96189434a908b85fc67a7e879 355 Pfam PF01594 Domain of unknown function DUF20 20 339 4.8E-58 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SCD_RS07715 c36b8c9275790b1efeb6e86b2ca71556 79 Gene3D G3DSA:1.10.10.10 3 46 9.0E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS07715 c36b8c9275790b1efeb6e86b2ca71556 79 SUPERFAMILY SSF46785 3 46 6.82E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS07715 c36b8c9275790b1efeb6e86b2ca71556 79 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 41 1.3E-5 T 22-04-2016 SCD_RS13135 b9c26fdf7ee029516b9f42ca0e9f6a6e 233 Pfam PF02104 SURF1 family 6 211 1.9E-29 T 22-04-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 SCD_RS00860 b30c27e5e809d91e133b334f6daa1e96 203 PRINTS PR00624 Histone H5 signature 94 113 1.2E-5 T 22-04-2016 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 SCD_RS00860 b30c27e5e809d91e133b334f6daa1e96 203 PRINTS PR00624 Histone H5 signature 36 50 1.2E-5 T 22-04-2016 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 SCD_RS00860 b30c27e5e809d91e133b334f6daa1e96 203 PRINTS PR00624 Histone H5 signature 72 89 1.2E-5 T 22-04-2016 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 SCD_RS12790 92a5547367f5dcb56d8c107ab749e6ee 169 Gene3D G3DSA:1.20.950.20 7 166 9.5E-4 T 22-04-2016 SCD_RS12790 92a5547367f5dcb56d8c107ab749e6ee 169 SUPERFAMILY SSF81342 2 165 2.35E-11 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SCD_RS12790 92a5547367f5dcb56d8c107ab749e6ee 169 Pfam PF01292 Prokaryotic cytochrome b561 2 165 1.1E-11 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SCD_RS04325 a305763aedebc3f8ce4cb449766bc641 190 PANTHER PTHR30353:SF8 2 177 2.8E-49 T 22-04-2016 SCD_RS04325 a305763aedebc3f8ce4cb449766bc641 190 Pfam PF09335 SNARE associated Golgi protein 22 143 1.6E-15 T 22-04-2016 IPR032816 SNARE associated Golgi protein SCD_RS04325 a305763aedebc3f8ce4cb449766bc641 190 PANTHER PTHR30353 2 177 2.8E-49 T 22-04-2016 IPR032818 DedA family SCD_RS00125 854d0532ebfe4ace396794fc442d2b64 460 PANTHER PTHR30538 134 451 7.9E-122 T 22-04-2016 SCD_RS00125 854d0532ebfe4ace396794fc442d2b64 460 PANTHER PTHR30538 15 101 7.9E-122 T 22-04-2016 SCD_RS00125 854d0532ebfe4ace396794fc442d2b64 460 Gene3D G3DSA:3.20.20.70 154 364 3.9E-9 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SCD_RS00125 854d0532ebfe4ace396794fc442d2b64 460 SUPERFAMILY SSF102114 155 374 2.22E-12 T 22-04-2016 SCD_RS00125 854d0532ebfe4ace396794fc442d2b64 460 PANTHER PTHR30538:SF0 134 451 7.9E-122 T 22-04-2016 SCD_RS00125 854d0532ebfe4ace396794fc442d2b64 460 PANTHER PTHR30538:SF0 15 101 7.9E-122 T 22-04-2016 SCD_RS08150 38e50d09ed1b7b881007cf619bba6978 89 Pfam PF05400 Flagellar protein FliT 1 86 1.3E-19 T 22-04-2016 IPR008622 Flagellar protein FliT SCD_RS08150 38e50d09ed1b7b881007cf619bba6978 89 Gene3D G3DSA:1.20.58.380 1 73 8.2E-11 T 22-04-2016 SCD_RS12035 235585eb2e1be304c16a86f83ea30f3b 449 PANTHER PTHR30213:SF0 3 433 2.1E-70 T 22-04-2016 SCD_RS12035 235585eb2e1be304c16a86f83ea30f3b 449 Pfam PF03631 Virulence factor BrkB 41 291 1.3E-49 T 22-04-2016 IPR017039 Virulence factor BrkB SCD_RS12035 235585eb2e1be304c16a86f83ea30f3b 449 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 41 288 1.4E-42 T 22-04-2016 IPR017039 Virulence factor BrkB SCD_RS12035 235585eb2e1be304c16a86f83ea30f3b 449 Gene3D G3DSA:1.10.10.10 311 436 2.5E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS12035 235585eb2e1be304c16a86f83ea30f3b 449 PANTHER PTHR30213 3 433 2.1E-70 T 22-04-2016 SCD_RS10835 16fcd2208b402e9a36a49a6dd96f3a45 235 PANTHER PTHR11922 27 213 2.0E-51 T 22-04-2016 SCD_RS10835 16fcd2208b402e9a36a49a6dd96f3a45 235 SUPERFAMILY SSF52317 18 187 6.95E-38 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SCD_RS10835 16fcd2208b402e9a36a49a6dd96f3a45 235 Pfam PF00117 Glutamine amidotransferase class-I 44 178 1.4E-14 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SCD_RS10835 16fcd2208b402e9a36a49a6dd96f3a45 235 PANTHER PTHR11922:SF11 27 213 2.0E-51 T 22-04-2016 SCD_RS10835 16fcd2208b402e9a36a49a6dd96f3a45 235 Gene3D G3DSA:3.40.50.880 2 230 1.0E-52 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SCD_RS04500 e8b3f021a17581b5c5482ae2e2b88c96 333 Pfam PF13379 NMT1-like family 51 260 4.5E-9 T 22-04-2016 SCD_RS04500 e8b3f021a17581b5c5482ae2e2b88c96 333 PANTHER PTHR30024 23 309 1.5E-20 T 22-04-2016 SCD_RS04500 e8b3f021a17581b5c5482ae2e2b88c96 333 SUPERFAMILY SSF53850 41 262 6.79E-22 T 22-04-2016 SCD_RS04500 e8b3f021a17581b5c5482ae2e2b88c96 333 Gene3D G3DSA:3.40.190.10 108 207 8.3E-12 T 22-04-2016 SCD_RS03605 3a23a3a0a71b9f789a83e190c646383a 154 PANTHER PTHR35603 66 116 1.5E-14 T 22-04-2016 SCD_RS03605 3a23a3a0a71b9f789a83e190c646383a 154 Pfam PF05433 Glycine zipper 2TM domain 66 107 1.5E-10 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 SCD_RS03605 3a23a3a0a71b9f789a83e190c646383a 154 PANTHER PTHR35603:SF2 66 116 1.5E-14 T 22-04-2016 SCD_RS07870 a86edc108e1e1ead3e836996581f33bc 420 Gene3D G3DSA:1.20.1250.20 5 197 4.0E-10 T 22-04-2016 SCD_RS07870 a86edc108e1e1ead3e836996581f33bc 420 Gene3D G3DSA:1.20.1250.20 217 404 2.6E-6 T 22-04-2016 SCD_RS07870 a86edc108e1e1ead3e836996581f33bc 420 Pfam PF07690 Major Facilitator Superfamily 9 342 8.0E-17 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SCD_RS07870 a86edc108e1e1ead3e836996581f33bc 420 SUPERFAMILY SSF103473 3 402 1.7E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain SCD_RS07870 a86edc108e1e1ead3e836996581f33bc 420 PANTHER PTHR23513:SF8 1 150 1.4E-74 T 22-04-2016 SCD_RS07870 a86edc108e1e1ead3e836996581f33bc 420 PANTHER PTHR23513:SF8 166 408 1.4E-74 T 22-04-2016 SCD_RS07870 a86edc108e1e1ead3e836996581f33bc 420 PANTHER PTHR23513 1 150 1.4E-74 T 22-04-2016 SCD_RS07870 a86edc108e1e1ead3e836996581f33bc 420 PANTHER PTHR23513 166 408 1.4E-74 T 22-04-2016 SCD_RS11975 8e7ab3bfd42f9d01073a2f9ed3327f48 243 PIRSF PIRSF009120 1 241 2.3E-66 T 22-04-2016 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 SCD_RS11975 8e7ab3bfd42f9d01073a2f9ed3327f48 243 Gene3D G3DSA:3.60.20.10 1 202 2.6E-11 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SCD_RS11975 8e7ab3bfd42f9d01073a2f9ed3327f48 243 SUPERFAMILY SSF56235 4 234 7.73E-20 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SCD_RS07190 504c9588191ee6409caa13b6e45b1488 215 Pfam PF01618 MotA/TolQ/ExbB proton channel family 78 193 1.1E-25 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SCD_RS07190 504c9588191ee6409caa13b6e45b1488 215 PANTHER PTHR30625 1 205 1.3E-31 T 22-04-2016 SCD_RS04555 2c3059bd1b47bd197e25e983e5525bd0 109 PANTHER PTHR37482:SF1 3 106 2.9E-29 T 22-04-2016 SCD_RS04555 2c3059bd1b47bd197e25e983e5525bd0 109 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 3 108 29.299 T 22-04-2016 IPR026592 Outer membrane protein assembly factor BamE SCD_RS04555 2c3059bd1b47bd197e25e983e5525bd0 109 PANTHER PTHR37482 3 106 2.9E-29 T 22-04-2016 SCD_RS04555 2c3059bd1b47bd197e25e983e5525bd0 109 Pfam PF04355 SmpA / OmlA family 35 101 4.0E-26 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 SCD_RS05580 df2994e4c015e11d155b3c70babce307 123 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 15 121 2.3E-31 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein SCD_RS05580 df2994e4c015e11d155b3c70babce307 123 PANTHER PTHR21192 17 123 5.4E-36 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein SCD_RS05580 df2994e4c015e11d155b3c70babce307 123 PANTHER PTHR21192:SF3 17 123 5.4E-36 T 22-04-2016 SCD_RS05580 df2994e4c015e11d155b3c70babce307 123 Gene3D G3DSA:3.40.1230.10 1 122 8.2E-42 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein SCD_RS05580 df2994e4c015e11d155b3c70babce307 123 SUPERFAMILY SSF64076 2 122 9.94E-37 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein SCD_RS05455 491213ecdea4d311bb294fbd4556083c 179 Pfam PF13689 Domain of unknown function (DUF4154) 35 176 8.5E-45 T 22-04-2016 IPR025293 Protein of unknown function DUF4154 SCD_RS14230 bdec14696f9d76ccb856a37fa854be6d 421 Pfam PF00534 Glycosyl transferases group 1 214 366 1.4E-26 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SCD_RS14230 bdec14696f9d76ccb856a37fa854be6d 421 SUPERFAMILY SSF53756 7 389 1.1E-53 T 22-04-2016 SCD_RS14230 bdec14696f9d76ccb856a37fa854be6d 421 PANTHER PTHR12526 3 368 1.3E-31 T 22-04-2016 SCD_RS14230 bdec14696f9d76ccb856a37fa854be6d 421 Gene3D G3DSA:3.40.50.2000 223 366 3.1E-18 T 22-04-2016 SCD_RS03790 6915f4f9f4c485234f97e5398146df8f 384 PANTHER PTHR30074:SF4 10 383 1.5E-142 T 22-04-2016 SCD_RS03790 6915f4f9f4c485234f97e5398146df8f 384 PANTHER PTHR30074 10 383 1.5E-142 T 22-04-2016 SCD_RS09185 35d7580adbe58eb01f03d90b869481d2 147 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 39 126 8.8E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS09185 35d7580adbe58eb01f03d90b869481d2 147 PANTHER PTHR35008 34 130 1.5E-15 T 22-04-2016 SCD_RS09185 35d7580adbe58eb01f03d90b869481d2 147 PRINTS PR00605 Class IC cytochrome C signature 104 126 2.0E-9 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 SCD_RS09185 35d7580adbe58eb01f03d90b869481d2 147 PRINTS PR00605 Class IC cytochrome C signature 48 59 2.0E-9 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 SCD_RS09185 35d7580adbe58eb01f03d90b869481d2 147 Gene3D G3DSA:1.10.760.10 34 131 3.2E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS09185 35d7580adbe58eb01f03d90b869481d2 147 SUPERFAMILY SSF46626 6 131 1.81E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS05130 dacb12dcf02218a1078877d9aa155ff8 89 Pfam PF06305 Protein of unknown function (DUF1049) 22 80 1.4E-14 T 22-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 SCD_RS11105 0fafc16545d362e86e3229b66bcd2c68 117 Gene3D G3DSA:1.10.760.10 27 111 3.9E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS11105 0fafc16545d362e86e3229b66bcd2c68 117 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 29 109 1.4E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS11105 0fafc16545d362e86e3229b66bcd2c68 117 SUPERFAMILY SSF46626 9 112 2.58E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS08025 ee1b32fe3169841830db02f7df047886 196 Pfam PF01351 Ribonuclease HII 10 186 3.9E-39 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain SCD_RS08025 ee1b32fe3169841830db02f7df047886 196 Gene3D G3DSA:3.30.420.10 8 148 3.9E-43 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS08025 ee1b32fe3169841830db02f7df047886 196 PANTHER PTHR10954 4 196 8.8E-68 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 SCD_RS08025 ee1b32fe3169841830db02f7df047886 196 Hamap MF_00052_B Ribonuclease HII [rnhB]. 8 187 37.073 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 SCD_RS08025 ee1b32fe3169841830db02f7df047886 196 SUPERFAMILY SSF53098 4 190 4.25E-66 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SCD_RS15780 fc2aac2d3399bcc0a04ceeb84a8bb4f6 1510 Pfam PF05567 Neisseria PilC beta-propeller domain 1033 1287 9.5E-46 T 22-04-2016 IPR008707 PilC beta-propeller domain SCD_RS11400 8d9c55188c495a745814578cd5f7c71b 381 Gene3D G3DSA:2.40.50.100 88 120 7.9E-12 T 22-04-2016 SCD_RS11400 8d9c55188c495a745814578cd5f7c71b 381 Gene3D G3DSA:2.40.50.100 194 228 7.9E-12 T 22-04-2016 SCD_RS11400 8d9c55188c495a745814578cd5f7c71b 381 SUPERFAMILY SSF111369 87 304 4.58E-23 T 22-04-2016 SCD_RS11400 8d9c55188c495a745814578cd5f7c71b 381 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 62 374 2.9E-51 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SCD_RS11400 8d9c55188c495a745814578cd5f7c71b 381 Pfam PF00529 HlyD membrane-fusion protein of T1SS 13 368 3.1E-8 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SCD_RS11400 8d9c55188c495a745814578cd5f7c71b 381 PANTHER PTHR30097 61 378 2.7E-62 T 22-04-2016 SCD_RS11400 8d9c55188c495a745814578cd5f7c71b 381 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 77 302 8.9E-43 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SCD_RS11400 8d9c55188c495a745814578cd5f7c71b 381 PANTHER PTHR30097:SF4 61 378 2.7E-62 T 22-04-2016 SCD_RS04990 d36a6a80fc8d4e5c3929e3312801315c 287 PANTHER PTHR30168 2 287 2.6E-127 T 22-04-2016 SCD_RS04990 d36a6a80fc8d4e5c3929e3312801315c 287 Pfam PF04228 Putative neutral zinc metallopeptidase 1 282 1.4E-115 T 22-04-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative SCD_RS02115 9127eb33e2ee988932816dbb28e979d1 162 Gene3D G3DSA:2.60.120.10 37 124 2.4E-7 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SCD_RS02115 9127eb33e2ee988932816dbb28e979d1 162 TIGRFAM TIGR04366 cupin_WbuC: cupin fold metalloprotein, WbuC family 4 136 1.4E-52 T 22-04-2016 IPR027565 Cupin fold metalloprotein, WbuC family SCD_RS02115 9127eb33e2ee988932816dbb28e979d1 162 SUPERFAMILY SSF51182 26 124 1.18E-14 T 22-04-2016 IPR011051 RmlC-like cupin domain SCD_RS06725 ae20423ff187b0236adae469dbc30617 337 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 27 290 1.1E-42 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 SCD_RS06725 ae20423ff187b0236adae469dbc30617 337 PANTHER PTHR33376 1 331 1.6E-40 T 22-04-2016 SCD_RS13850 3c31ffbc11f65773ecfd32157bb557e8 163 SUPERFAMILY SSF52833 35 154 3.27E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS13850 3c31ffbc11f65773ecfd32157bb557e8 163 Pfam PF13899 Thioredoxin-like 35 95 1.1E-10 T 22-04-2016 SCD_RS13850 3c31ffbc11f65773ecfd32157bb557e8 163 Gene3D G3DSA:3.40.30.10 33 152 1.0E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS04285 83e1b2a3285fa5554ada692b69e273d2 84 Pfam PF04325 Protein of unknown function (DUF465) 29 76 1.0E-16 T 22-04-2016 IPR007420 Protein of unknown function DUF465 SCD_RS13645 72bc14de4d6fbd5c1564f8ab499432ab 268 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 35 220 1.7E-25 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SCD_RS13645 72bc14de4d6fbd5c1564f8ab499432ab 268 SUPERFAMILY SSF53901 10 169 1.94E-10 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SCD_RS00990 898f7c8027d22a8538cd5365ba72b13e 222 Pfam PF13192 Thioredoxin domain 1 77 6.9E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS00990 898f7c8027d22a8538cd5365ba72b13e 222 Gene3D G3DSA:3.40.30.10 2 78 6.2E-8 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS00990 898f7c8027d22a8538cd5365ba72b13e 222 SUPERFAMILY SSF52833 2 75 5.41E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold SCD_RS00990 898f7c8027d22a8538cd5365ba72b13e 222 SUPERFAMILY SSF81442 94 218 1.28E-5 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS00170 673cfedec100811247789130a476ac69 452 Pfam PF00209 Sodium:neurotransmitter symporter family 7 124 9.7E-22 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SCD_RS00170 673cfedec100811247789130a476ac69 452 Pfam PF00209 Sodium:neurotransmitter symporter family 158 446 1.6E-24 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SCD_RS00170 673cfedec100811247789130a476ac69 452 PANTHER PTHR11616 3 448 1.3E-137 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SCD_RS00170 673cfedec100811247789130a476ac69 452 SUPERFAMILY SSF161070 7 448 1.57E-125 T 22-04-2016 SCD_RS00170 673cfedec100811247789130a476ac69 452 PANTHER PTHR11616:SF167 3 448 1.3E-137 T 22-04-2016 SCD_RS00170 673cfedec100811247789130a476ac69 452 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 258 278 1.0E-15 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SCD_RS00170 673cfedec100811247789130a476ac69 452 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 44 63 1.0E-15 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SCD_RS00170 673cfedec100811247789130a476ac69 452 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 429 449 1.0E-15 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SCD_RS00170 673cfedec100811247789130a476ac69 452 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 15 36 1.0E-15 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SCD_RS06830 b0a0c4295bd91bf51474aa66576b404b 133 SUPERFAMILY SSF81593 13 126 1.37E-16 T 22-04-2016 SCD_RS06830 b0a0c4295bd91bf51474aa66576b404b 133 Gene3D G3DSA:1.20.120.330 4 127 6.0E-23 T 22-04-2016 SCD_RS06830 b0a0c4295bd91bf51474aa66576b404b 133 SMART SM00748 5 125 3.1E-10 T 22-04-2016 IPR007842 HEPN domain SCD_RS06830 b0a0c4295bd91bf51474aa66576b404b 133 Pfam PF05168 HEPN domain 9 117 5.8E-21 T 22-04-2016 IPR007842 HEPN domain SCD_RS14245 153728b3370e54bc2bc47eeaa041be7c 146 SUPERFAMILY SSF51182 31 132 9.24E-10 T 22-04-2016 IPR011051 RmlC-like cupin domain SCD_RS14245 153728b3370e54bc2bc47eeaa041be7c 146 Gene3D G3DSA:2.60.120.10 24 131 1.8E-7 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SCD_RS12840 e22773c2d0fcdaa77602b0ad993d861e 211 Pfam PF06532 Protein of unknown function (DUF1109) 11 211 4.9E-44 T 22-04-2016 IPR009495 Protein of unknown function DUF1109 SCD_RS14140 c23ef66544e2e910711c65af93758944 66 Gene3D G3DSA:1.20.5.170 2 43 1.4E-6 T 22-04-2016 SCD_RS13425 1aac8a5bf9e8668122a286e1f6bd0f68 100 Gene3D G3DSA:3.40.1260.10 1 97 5.7E-27 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS13425 1aac8a5bf9e8668122a286e1f6bd0f68 100 Pfam PF04077 DsrH like protein 7 95 6.8E-29 T 22-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 SCD_RS13425 1aac8a5bf9e8668122a286e1f6bd0f68 100 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 99 1.0E-31 T 22-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 SCD_RS13425 1aac8a5bf9e8668122a286e1f6bd0f68 100 SUPERFAMILY SSF75169 1 99 1.11E-27 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS13425 1aac8a5bf9e8668122a286e1f6bd0f68 100 PANTHER PTHR37526 1 99 1.2E-20 T 22-04-2016 SCD_RS00985 e56c8febe1a43a686699ff1ad1b3adb8 136 SUPERFAMILY SSF81442 36 130 2.62E-10 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS00985 e56c8febe1a43a686699ff1ad1b3adb8 136 Gene3D G3DSA:1.20.210.10 40 98 5.3E-4 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SCD_RS14680 4cd28210a92f85b9e7fdc8f6e8b9708b 442 Pfam PF04932 O-Antigen ligase 201 337 1.3E-14 T 22-04-2016 IPR007016 O-antigen ligase-related SCD_RS14680 4cd28210a92f85b9e7fdc8f6e8b9708b 442 TIGRFAM TIGR03097 PEP_O_lig_1: probable O-glycosylation ligase, exosortase A-associated 2 404 1.0E-169 T 22-04-2016 IPR017528 Conserved hypothetical protein CHP03097, O-antigen ligase-related SCD_RS11585 749d80f13fa2a7bccef131cbc14d0951 240 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 217 239 6.5E-6 T 22-04-2016 IPR013424 PEP-CTERM protein-sorting domain SCD_RS11585 749d80f13fa2a7bccef131cbc14d0951 240 Pfam PF07589 PEP-CTERM motif 216 238 1.1E-7 T 22-04-2016 IPR013424 PEP-CTERM protein-sorting domain SCD_RS11970 7b1f1db8759c9cdc11b4d373e902f9e8 327 PANTHER PTHR34595 1 324 7.2E-129 T 22-04-2016 SCD_RS11970 7b1f1db8759c9cdc11b4d373e902f9e8 327 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 311 7.0E-106 T 22-04-2016 IPR007296 Domain of unknown function DUF403 SCD_RS05365 55ed39564ba98314e68f3b2dc13b2fe1 111 Pfam PF08870 Domain of unknown function (DUF1832) 5 107 8.0E-28 T 22-04-2016 IPR014969 DNA sulphur modification protein DndE SCD_RS05365 55ed39564ba98314e68f3b2dc13b2fe1 111 TIGRFAM TIGR03184 DNA_S_dndE: DNA sulfur modification protein DndE 6 102 1.1E-24 T 22-04-2016 IPR014969 DNA sulphur modification protein DndE SCD_RS06900 4fdae03a064a08f560985b10a5d24cb6 161 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 142 5.9E-35 T 22-04-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC SCD_RS06900 4fdae03a064a08f560985b10a5d24cb6 161 PIRSF PIRSF004923 1 153 1.3E-36 T 22-04-2016 IPR026268 Protein RseC SCD_RS06900 4fdae03a064a08f560985b10a5d24cb6 161 PANTHER PTHR35867:SF1 2 156 1.5E-26 T 22-04-2016 SCD_RS06900 4fdae03a064a08f560985b10a5d24cb6 161 PANTHER PTHR35867 2 156 1.5E-26 T 22-04-2016 SCD_RS08830 b068e9487dd31218430d02503a7845c0 135 Gene3D G3DSA:1.25.40.10 36 110 4.4E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS08830 b068e9487dd31218430d02503a7845c0 135 SUPERFAMILY SSF48452 33 110 1.44E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS00395 4cd7d5e9ba29e989d7dc5b7ff8501dfe 423 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 17 421 4.1E-194 T 22-04-2016 IPR011718 Glutamate--cysteine ligase GshA SCD_RS00395 4cd7d5e9ba29e989d7dc5b7ff8501dfe 423 SUPERFAMILY SSF56059 261 350 3.98E-6 T 22-04-2016 SCD_RS00395 4cd7d5e9ba29e989d7dc5b7ff8501dfe 423 Pfam PF08886 Glutamate-cysteine ligase 17 418 3.9E-206 T 22-04-2016 IPR011718 Glutamate--cysteine ligase GshA SCD_RS12860 bb16e622d5bb269b4fc02adeca30b71f 248 Pfam PF09836 Putative DNA-binding domain 9 95 4.0E-27 T 22-04-2016 IPR018640 Putative DNA-binding domain, bacteria SCD_RS13975 c2a123baf39ba317442cc8ce01fbb250 217 Gene3D G3DSA:3.30.1150.10 124 207 9.1E-7 T 22-04-2016 SCD_RS13975 c2a123baf39ba317442cc8ce01fbb250 217 Pfam PF13103 TonB C terminal 129 212 8.8E-7 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SCD_RS13975 c2a123baf39ba317442cc8ce01fbb250 217 SUPERFAMILY SSF74653 121 214 1.18E-8 T 22-04-2016 SCD_RS13975 c2a123baf39ba317442cc8ce01fbb250 217 SUPERFAMILY SSF74653 52 62 1.18E-8 T 22-04-2016 SCD_RS11850 c8a290ba78fc971a5d51c17093b287e2 336 SUPERFAMILY SSF53448 9 104 6.38E-9 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS11850 c8a290ba78fc971a5d51c17093b287e2 336 Pfam PF13704 Glycosyl transferase family 2 16 102 8.6E-12 T 22-04-2016 SCD_RS13770 340c09774ccdfb73c5a08b196ef8d542 357 Pfam PF11906 Protein of unknown function (DUF3426) 209 352 9.2E-43 T 22-04-2016 IPR021834 Protein of unknown function DUF3426 SCD_RS01500 207a751078ced2cfb407c705b81c97a9 278 Pfam PF03239 Iron permease FTR1 family 1 253 4.0E-29 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 SCD_RS01500 207a751078ced2cfb407c705b81c97a9 278 PANTHER PTHR31632 1 261 9.5E-29 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 SCD_RS07795 b491eb20a533fa44c4a6b2b525a077aa 830 PANTHER PTHR30287 2 830 6.2E-122 T 22-04-2016 SCD_RS07795 b491eb20a533fa44c4a6b2b525a077aa 830 Pfam PF02687 FtsX-like permease family 260 370 7.7E-11 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SCD_RS07795 b491eb20a533fa44c4a6b2b525a077aa 830 Pfam PF02687 FtsX-like permease family 708 820 2.8E-9 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SCD_RS02725 b82925530210229a0580ebe13b935c9a 205 PANTHER PTHR30108:SF2 78 203 2.2E-75 T 22-04-2016 SCD_RS02725 b82925530210229a0580ebe13b935c9a 205 PANTHER PTHR30108:SF2 1 61 2.2E-75 T 22-04-2016 SCD_RS02725 b82925530210229a0580ebe13b935c9a 205 Pfam PF02441 Flavoprotein 7 147 4.4E-29 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SCD_RS02725 b82925530210229a0580ebe13b935c9a 205 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 8 201 3.2E-62 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 SCD_RS02725 b82925530210229a0580ebe13b935c9a 205 PANTHER PTHR30108 78 203 2.2E-75 T 22-04-2016 SCD_RS02725 b82925530210229a0580ebe13b935c9a 205 PANTHER PTHR30108 1 61 2.2E-75 T 22-04-2016 SCD_RS02725 b82925530210229a0580ebe13b935c9a 205 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 6 203 35.531 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 SCD_RS02725 b82925530210229a0580ebe13b935c9a 205 Gene3D G3DSA:3.40.50.1950 7 203 1.6E-73 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SCD_RS02725 b82925530210229a0580ebe13b935c9a 205 SUPERFAMILY SSF52507 6 203 1.7E-59 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SCD_RS14835 48b234f279bf035ca1092f861d935a66 338 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 313 337 6.6E-8 T 22-04-2016 IPR013424 PEP-CTERM protein-sorting domain SCD_RS14835 48b234f279bf035ca1092f861d935a66 338 Pfam PF07589 PEP-CTERM motif 313 335 5.3E-8 T 22-04-2016 IPR013424 PEP-CTERM protein-sorting domain SCD_RS06490 d9302ed8d240f77d2881e74a6ae47ae5 249 TIGRFAM TIGR03370 VPLPA-CTERM: VPLPA-CTERM protein sorting domain 223 247 2.2E-8 T 22-04-2016 IPR022472 VPLPA-CTERM protein sorting domain SCD_RS07615 35ba7542ee84d0c82d1219141e537fb8 171 Pfam PF02620 Uncharacterized ACR, COG1399 60 164 6.5E-15 T 22-04-2016 IPR003772 Protein of unknown function DUF177 SCD_RS07615 35ba7542ee84d0c82d1219141e537fb8 171 PANTHER PTHR38099 1 166 2.0E-17 T 22-04-2016 SCD_RS06360 46927fdc4bf3e44bf507eb3740f465d0 103 Pfam PF10052 Protein of unknown function (DUF2288) 11 100 2.9E-33 T 22-04-2016 IPR018741 Protein of unknown function DUF2288 SCD_RS15795 bc30ba43cf0cf0667dfc1e50dbc15294 153 Pfam PF07766 LETM1-like protein 72 128 3.7E-5 T 22-04-2016 IPR011685 LETM1-like SCD_RS02190 a7d0acf6d75214bf2f9c8eca93bf05ec 92 Pfam PF15781 ParE-like toxin of type II bacterial toxin-antitoxin system 5 91 4.7E-35 T 22-04-2016 IPR031552 Type II bacterial toxin-antitoxin system, ParE-like toxin SCD_RS02190 a7d0acf6d75214bf2f9c8eca93bf05ec 92 SUPERFAMILY SSF143011 1 85 1.26E-8 T 22-04-2016 SCD_RS01185 c6cc8c5da180bd0e6057f88eeb3cb260 102 Pfam PF12587 Protein of unknown function (DUF3761) 27 101 2.5E-35 T 22-04-2016 IPR022236 Protein of unknown function DUF3761 SCD_RS00685 9f7ee65a1198b0c2d50bd0dbafa52f4a 218 Pfam PF08722 TnsA endonuclease N terminal 44 125 1.3E-12 T 22-04-2016 IPR014833 TnsA endonuclease, N-terminal SCD_RS00685 9f7ee65a1198b0c2d50bd0dbafa52f4a 218 Pfam PF08721 TnsA endonuclease C terminal 127 202 1.2E-12 T 22-04-2016 IPR014832 TnsA endonuclease C-terminal SCD_RS14780 818f2260a091acf3a0409e36f5372939 794 Pfam PF04892 VanZ like family 339 465 7.3E-12 T 22-04-2016 IPR006976 VanZ-like SCD_RS14780 818f2260a091acf3a0409e36f5372939 794 Pfam PF04892 VanZ like family 63 167 2.8E-15 T 22-04-2016 IPR006976 VanZ-like SCD_RS14780 818f2260a091acf3a0409e36f5372939 794 Pfam PF04892 VanZ like family 195 312 3.2E-10 T 22-04-2016 IPR006976 VanZ-like SCD_RS09845 f587fce941afcede2ba7de0e70fae43e 191 Pfam PF11845 Protein of unknown function (DUF3365) 6 190 4.1E-29 T 22-04-2016 IPR021796 Protein of unknown function DUF3365 SCD_RS10140 5650d3350716a9faa7f541c6e26480b8 189 Pfam PF11227 Protein of unknown function (DUF3025) 61 172 2.0E-36 T 22-04-2016 IPR021390 Protein of unknown function DUF3025 SCD_RS11745 ae984d481e3fe0bfebe2b721efcb5346 246 SUPERFAMILY SSF52540 9 199 7.36E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS13585 7967a2b62d5ab48b4df3876c09664bf4 438 Pfam PF09459 Ethylbenzene dehydrogenase 27 414 2.9E-71 T 22-04-2016 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 SCD_RS13585 7967a2b62d5ab48b4df3876c09664bf4 438 SMART SM00887 25 415 1.3E-103 T 22-04-2016 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 SCD_RS01285 1ec004437ec198ccb09fc0e44ec14585 129 Pfam PF14462 Prokaryotic E2 family E 3 124 1.2E-43 T 22-04-2016 IPR025701 Ubiquitin-conjugating enzyme, E2, family E SCD_RS11340 4c105a95e923b59894119075f2adac4d 256 SUPERFAMILY SSF109604 6 246 1.05E-63 T 22-04-2016 SCD_RS11340 4c105a95e923b59894119075f2adac4d 256 Pfam PF08668 HDOD domain 4 187 1.1E-56 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS11340 4c105a95e923b59894119075f2adac4d 256 Gene3D G3DSA:1.10.3150.10 1 246 1.7E-74 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SCD_RS11340 4c105a95e923b59894119075f2adac4d 256 PANTHER PTHR33525:SF3 8 247 6.5E-52 T 22-04-2016 SCD_RS11340 4c105a95e923b59894119075f2adac4d 256 PANTHER PTHR33525 8 247 6.5E-52 T 22-04-2016 SCD_RS11340 4c105a95e923b59894119075f2adac4d 256 TIGRFAM TIGR00277 HDIG: HDIG domain 87 186 2.7E-14 T 22-04-2016 IPR006675 HDIG domain SCD_RS01290 292a75a563beacf74ebe0bb9558f5972 87 Pfam PF14452 Multiubiquitin 16 75 9.1E-7 T 22-04-2016 IPR027802 Multi-ubiquitin domain SCD_RS15920 ca970ff2fabf59895327b34be8311c27 178 Pfam PF05137 Fimbrial assembly protein (PilN) 96 173 7.1E-7 T 22-04-2016 IPR007813 Fimbrial assembly PilN SCD_RS06820 a4735e2f08d0db2ac4446db4bbf3aa26 87 Pfam PF13619 KTSC domain 7 64 5.1E-16 T 22-04-2016 IPR025309 KTSC domain SCD_RS12225 be25385dad11357fb432de366a2875b9 243 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 8 217 2.8E-24 T 22-04-2016 SCD_RS01835 d8fb7cbca0281e828f3732d91ed5005a 84 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 12 76 2.7E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01835 d8fb7cbca0281e828f3732d91ed5005a 84 SUPERFAMILY SSF46626 15 79 2.62E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS01835 d8fb7cbca0281e828f3732d91ed5005a 84 Gene3D G3DSA:1.10.760.10 9 79 1.5E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SCD_RS08900 4b91a0481e084a07fecde3262798a16e 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 60 7.5E-24 T 22-04-2016 IPR019201 Protein of unknown function DUF2065 SCD_RS02405 c395b707be2108fbf8996ed6823826a5 109 SUPERFAMILY SSF54913 8 99 2.54E-7 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SCD_RS11090 7d5975709559422f5d302de3a09abd5a 80 Pfam PF09851 Short C-terminal domain 53 75 1.3E-8 T 22-04-2016 IPR018649 SHOCT domain SCD_RS01455 11e4900606c57b1a4681cb4358db7d7f 72 Pfam PF13711 Domain of unknown function (DUF4160) 11 70 1.2E-14 T 22-04-2016 IPR025427 Protein of unknown function DUF4160 SCD_RS14010 30e9669716019453ea71ddfdd88c267a 474 SUPERFAMILY SSF63829 60 111 1.44E-5 T 22-04-2016 SCD_RS14010 30e9669716019453ea71ddfdd88c267a 474 SUPERFAMILY SSF63829 250 268 1.44E-5 T 22-04-2016 SCD_RS14010 30e9669716019453ea71ddfdd88c267a 474 SUPERFAMILY SSF63829 147 223 1.44E-5 T 22-04-2016 SCD_RS14010 30e9669716019453ea71ddfdd88c267a 474 SUPERFAMILY SSF75011 395 435 4.84E-10 T 22-04-2016 SCD_RS14010 30e9669716019453ea71ddfdd88c267a 474 SUPERFAMILY SSF75011 256 359 4.84E-10 T 22-04-2016 SCD_RS14010 30e9669716019453ea71ddfdd88c267a 474 SUPERFAMILY SSF75011 186 228 4.84E-10 T 22-04-2016 SCD_RS14010 30e9669716019453ea71ddfdd88c267a 474 Gene3D G3DSA:2.130.10.10 187 322 1.0E-9 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SCD_RS14010 30e9669716019453ea71ddfdd88c267a 474 Pfam PF13449 Esterase-like activity of phytase 56 415 6.6E-65 T 22-04-2016 IPR027372 Phytase-like domain SCD_RS14010 30e9669716019453ea71ddfdd88c267a 474 TIGRFAM TIGR03370 VPLPA-CTERM: VPLPA-CTERM protein sorting domain 448 471 4.4E-7 T 22-04-2016 IPR022472 VPLPA-CTERM protein sorting domain SCD_RS14010 30e9669716019453ea71ddfdd88c267a 474 PANTHER PTHR37957 70 332 4.4E-19 T 22-04-2016 SCD_RS02420 70dc93fdc59a70b8b3ee2e1f3fb22c96 142 TIGRFAM TIGR03370 VPLPA-CTERM: VPLPA-CTERM protein sorting domain 117 140 6.1E-7 T 22-04-2016 IPR022472 VPLPA-CTERM protein sorting domain SCD_RS13810 1a14e9fe30e6cd81ebfbaee46ec8076c 132 Pfam PF04186 FxsA cytoplasmic membrane protein 9 102 1.0E-15 T 22-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 SCD_RS08640 0ffc4e12e30ec18edbd017cdf9545c3d 339 Pfam PF00535 Glycosyl transferase family 2 12 176 6.8E-27 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SCD_RS08640 0ffc4e12e30ec18edbd017cdf9545c3d 339 Gene3D G3DSA:3.90.550.10 10 182 7.2E-27 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS08640 0ffc4e12e30ec18edbd017cdf9545c3d 339 SUPERFAMILY SSF53448 10 264 2.49E-43 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SCD_RS08640 0ffc4e12e30ec18edbd017cdf9545c3d 339 PANTHER PTHR10859:SF49 3 318 5.5E-112 T 22-04-2016 SCD_RS08640 0ffc4e12e30ec18edbd017cdf9545c3d 339 PANTHER PTHR10859 3 318 5.5E-112 T 22-04-2016 SCD_RS08745 5cd66f3825b87fa62512b73369325578 125 Pfam PF13686 DsrE/DsrF/DrsH-like family 61 119 2.6E-7 T 22-04-2016 IPR032836 DsrE/DsrF/DrsH-like family SCD_RS08745 5cd66f3825b87fa62512b73369325578 125 SUPERFAMILY SSF75169 10 123 9.81E-15 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS08745 5cd66f3825b87fa62512b73369325578 125 Gene3D G3DSA:3.40.1260.10 2 119 1.5E-19 T 22-04-2016 IPR027396 DsrEFH-like SCD_RS14705 1e8b8fe5b979e3513c91ec4a2b2413ff 251 Gene3D G3DSA:1.25.40.10 63 170 8.0E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS14705 1e8b8fe5b979e3513c91ec4a2b2413ff 251 SMART SM00028 133 166 1.6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14705 1e8b8fe5b979e3513c91ec4a2b2413ff 251 SMART SM00028 99 132 11.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SCD_RS14705 1e8b8fe5b979e3513c91ec4a2b2413ff 251 SUPERFAMILY SSF48452 63 171 5.58E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS15885 c633b4b048d24c9b25ccb12050596994 140 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 2 22 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SCD_RS15885 c633b4b048d24c9b25ccb12050596994 140 Gene3D G3DSA:3.30.700.10 4 31 2.2E-4 T 22-04-2016 SCD_RS15885 c633b4b048d24c9b25ccb12050596994 140 SUPERFAMILY SSF54523 4 119 9.42E-13 T 22-04-2016 SCD_RS02655 789f413f633b2b7c7c4a68a6a722ce2f 701 Pfam PF05170 AsmA family 1 597 6.6E-59 T 22-04-2016 IPR007844 AsmA SCD_RS02655 789f413f633b2b7c7c4a68a6a722ce2f 701 PANTHER PTHR30441:SF4 9 700 2.4E-74 T 22-04-2016 SCD_RS02655 789f413f633b2b7c7c4a68a6a722ce2f 701 PANTHER PTHR30441 9 700 2.4E-74 T 22-04-2016 SCD_RS11925 e60db6e0d08d1efbf5c26668e36908f2 67 Pfam PF14070 Putative motility protein 8 65 1.3E-7 T 22-04-2016 IPR025906 Putative motility protein SCD_RS01295 f5ae46b7c6204e4cc0859031add927ac 70 Pfam PF01402 Ribbon-helix-helix protein, copG family 10 41 6.6E-5 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 SCD_RS03625 56e935d22093108328165a499ec87d39 131 PIRSF PIRSF029543 1 131 2.6E-32 T 22-04-2016 IPR016924 Uncharacterised conserved protein UCP029543 SCD_RS00715 74b80764f5c8451f8dca3abf8b3bdecf 259 PANTHER PTHR30269 1 258 1.0E-51 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SCD_RS00715 74b80764f5c8451f8dca3abf8b3bdecf 259 Pfam PF01925 Sulfite exporter TauE/SafE 6 252 1.9E-51 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SCD_RS00715 74b80764f5c8451f8dca3abf8b3bdecf 259 PANTHER PTHR30269:SF14 1 258 1.0E-51 T 22-04-2016 SCD_RS13655 70a5bc6d4b90c5e76386f82ebdc957cf 228 Pfam PF01569 PAP2 superfamily 113 216 1.7E-11 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SCD_RS06720 5ba10ac47b08037bb88612464051ca1e 166 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 33 156 4.1E-18 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component SCD_RS11405 9104551fcdcfaba8c22bd9dd66716798 411 PANTHER PTHR30203 29 406 4.4E-52 T 22-04-2016 SCD_RS11405 9104551fcdcfaba8c22bd9dd66716798 411 SUPERFAMILY SSF56954 16 406 4.32E-63 T 22-04-2016 SCD_RS11405 9104551fcdcfaba8c22bd9dd66716798 411 Pfam PF02321 Outer membrane efflux protein 29 206 1.0E-26 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SCD_RS11405 9104551fcdcfaba8c22bd9dd66716798 411 Pfam PF02321 Outer membrane efflux protein 235 406 1.6E-21 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SCD_RS11405 9104551fcdcfaba8c22bd9dd66716798 411 Gene3D G3DSA:1.20.1600.10 20 406 8.8E-54 T 22-04-2016 SCD_RS04100 f574fde4fb3d830e56474c9911d8772c 117 Pfam PF09842 Predicted membrane protein (DUF2069) 11 109 1.9E-38 T 22-04-2016 IPR018643 Protein of unknown function DUF2069, membrane SCD_RS01005 fe060e7ae1756ceb4c2998f8443da217 164 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 23 122 1.4E-18 T 22-04-2016 IPR016476 SH3 domain protein SCD_RS01005 fe060e7ae1756ceb4c2998f8443da217 164 SMART SM00287 18 82 4.7E-6 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type SCD_RS01005 fe060e7ae1756ceb4c2998f8443da217 164 Pfam PF08239 Bacterial SH3 domain 28 78 6.2E-8 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type SCD_RS11055 a49593d1f00d2709e374f5c4970976d3 150 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 32.324 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 SCD_RS11055 a49593d1f00d2709e374f5c4970976d3 150 PANTHER PTHR35146 1 146 1.9E-56 T 22-04-2016 SCD_RS11055 a49593d1f00d2709e374f5c4970976d3 150 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 145 4.0E-50 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 SCD_RS11055 a49593d1f00d2709e374f5c4970976d3 150 PANTHER PTHR35146:SF1 1 146 1.9E-56 T 22-04-2016 SCD_RS11555 4c8028a637425cb5e5a881d833882bf5 174 Pfam PF08239 Bacterial SH3 domain 37 76 1.3E-7 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type SCD_RS11555 4c8028a637425cb5e5a881d833882bf5 174 Gene3D G3DSA:2.30.30.40 49 76 0.001 T 22-04-2016 SCD_RS11590 12062ce9131b32e6853572333473ae81 359 Pfam PF14907 Uncharacterised nucleotidyltransferase 23 279 5.5E-50 T 22-04-2016 SCD_RS07025 165b1b84d7a7d323381b76a2437a50ba 410 PANTHER PTHR30026 11 409 4.3E-14 T 22-04-2016 SCD_RS07025 165b1b84d7a7d323381b76a2437a50ba 410 Pfam PF02321 Outer membrane efflux protein 13 202 2.7E-13 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SCD_RS07025 165b1b84d7a7d323381b76a2437a50ba 410 Pfam PF02321 Outer membrane efflux protein 233 397 5.0E-11 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SCD_RS07025 165b1b84d7a7d323381b76a2437a50ba 410 SUPERFAMILY SSF56954 16 401 1.96E-39 T 22-04-2016 SCD_RS07025 165b1b84d7a7d323381b76a2437a50ba 410 Gene3D G3DSA:1.20.1600.10 16 397 1.4E-29 T 22-04-2016 SCD_RS09305 6f971f67d5ba80c76b1cec4e4b265734 299 PANTHER PTHR32479:SF12 6 292 1.0E-44 T 22-04-2016 SCD_RS09305 6f971f67d5ba80c76b1cec4e4b265734 299 Pfam PF02754 Cysteine-rich domain 158 243 5.8E-11 T 22-04-2016 IPR004017 Cysteine-rich domain SCD_RS09305 6f971f67d5ba80c76b1cec4e4b265734 299 Pfam PF02754 Cysteine-rich domain 6 90 9.3E-8 T 22-04-2016 IPR004017 Cysteine-rich domain SCD_RS09305 6f971f67d5ba80c76b1cec4e4b265734 299 PANTHER PTHR32479 6 292 1.0E-44 T 22-04-2016 SCD_RS13220 d0116a19cd71abf64827c1afc68b008f 226 Pfam PF04612 Type II secretion system (T2SS), protein M 8 106 1.3E-6 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 SCD_RS05035 9b618b51f4d8900e22dd66540cf16567 166 Pfam PF03692 Putative zinc- or iron-chelating domain 27 111 3.2E-7 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein SCD_RS04880 80830656db15adb9a02b2496a363de43 298 ProSitePatterns PS00018 EF-hand calcium-binding domain. 212 224 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site SCD_RS10740 35ca923bcdd5f35f0fb5ebdeae271223 99 Pfam PF13591 MerR HTH family regulatory protein 15 95 6.4E-16 T 22-04-2016 SCD_RS04835 37e9c4387b683b14774c5b9692893209 287 Gene3D G3DSA:1.25.40.10 199 281 1.3E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS04835 37e9c4387b683b14774c5b9692893209 287 Gene3D G3DSA:1.25.40.10 140 198 2.8E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS04835 37e9c4387b683b14774c5b9692893209 287 SUPERFAMILY SSF48452 140 256 4.34E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SCD_RS11665 148217bba81e5909cac89ea98ddf426f 232 Pfam PF11306 Protein of unknown function (DUF3108) 15 226 6.5E-31 T 22-04-2016 IPR021457 Protein of unknown function DUF3108 SCD_RS10230 17449dcee1bad9247b6b40a6b6bb8954 155 PIRSF PIRSF001013 4 152 3.8E-31 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 SCD_RS10230 17449dcee1bad9247b6b40a6b6bb8954 155 Pfam PF00545 ribonuclease 64 150 1.9E-21 T 22-04-2016 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 SCD_RS10230 17449dcee1bad9247b6b40a6b6bb8954 155 Gene3D G3DSA:3.10.450.30 59 151 4.0E-27 T 22-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 SCD_RS10230 17449dcee1bad9247b6b40a6b6bb8954 155 SUPERFAMILY SSF53933 59 151 3.68E-25 T 22-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 SCD_RS06535 c536f19f6579202d90a7f9258aa2aae3 161 Pfam PF02517 CAAX protease self-immunity 53 149 7.2E-17 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SCD_RS02400 3d615c9acaa3c8e0fdebad8f8c4eacb3 122 SMART SM00938 14 108 9.8E-6 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SCD_RS02400 3d615c9acaa3c8e0fdebad8f8c4eacb3 122 Pfam PF00543 Nitrogen regulatory protein P-II 14 106 2.6E-10 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SCD_RS02400 3d615c9acaa3c8e0fdebad8f8c4eacb3 122 Gene3D G3DSA:3.30.70.120 13 105 2.1E-12 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SCD_RS02400 3d615c9acaa3c8e0fdebad8f8c4eacb3 122 SUPERFAMILY SSF54913 13 106 4.73E-19 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SCD_RS02480 51fcc1c1b6b8a28a2743c3d72ca548ea 147 Pfam PF13682 Chemoreceptor zinc-binding domain 37 104 4.7E-14 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SCD_RS12575 dda45da2e0ca942bdf807a9d91683f3b 217 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 17 210 4.5E-18 T 22-04-2016 SCD_RS04310 08511ce9c590432b256a181c038b3491 264 Pfam PF03988 Repeat of Unknown Function (DUF347) 73 121 1.7E-13 T 22-04-2016 IPR007136 Protein of unknown function DUF347 SCD_RS04310 08511ce9c590432b256a181c038b3491 264 Pfam PF03988 Repeat of Unknown Function (DUF347) 193 242 1.0E-10 T 22-04-2016 IPR007136 Protein of unknown function DUF347 SCD_RS04310 08511ce9c590432b256a181c038b3491 264 Pfam PF03988 Repeat of Unknown Function (DUF347) 18 68 2.3E-19 T 22-04-2016 IPR007136 Protein of unknown function DUF347 SCD_RS04310 08511ce9c590432b256a181c038b3491 264 Pfam PF03988 Repeat of Unknown Function (DUF347) 138 189 8.5E-17 T 22-04-2016 IPR007136 Protein of unknown function DUF347 SCD_RS03850 ce56f5e02b05732a1531b33cc64de36d 228 Pfam PF07603 Protein of unknown function (DUF1566) 35 195 2.2E-10 T 22-04-2016 IPR011460 Protein of unknown function DUF1566 SCD_RS15720 0cf74bbaf2b85eb6526488554c5b10c3 144 Pfam PF11304 Protein of unknown function (DUF3106) 37 106 2.5E-5 T 22-04-2016 IPR021455 Protein of unknown function DUF3106 SCD_RS15515 4b228601900fa25666cf59ab827bfc2f 510 Pfam PF06527 TniQ 13 154 8.6E-30 T 22-04-2016 IPR009492 TniQ SCD_RS06785 4e6eb77ba32f85957175c0388dd0c07a 459 Pfam PF07603 Protein of unknown function (DUF1566) 161 301 1.7E-17 T 22-04-2016 IPR011460 Protein of unknown function DUF1566 SCD_RS06785 4e6eb77ba32f85957175c0388dd0c07a 459 Pfam PF07603 Protein of unknown function (DUF1566) 318 416 1.5E-26 T 22-04-2016 IPR011460 Protein of unknown function DUF1566 SCD_RS00065 b8473f11e1ad5ce664afea7ac0d1cb8e 202 Pfam PF14334 Domain of unknown function (DUF4390) 5 118 4.8E-39 T 22-04-2016 IPR025500 Protein of unknown function DUF4390 SCD_RS00065 b8473f11e1ad5ce664afea7ac0d1cb8e 202 Pfam PF14334 Domain of unknown function (DUF4390) 148 199 1.5E-14 T 22-04-2016 IPR025500 Protein of unknown function DUF4390 SCD_RS04960 5f63f2b9d25bdf3a8040ea9d11bbc892 324 Pfam PF13280 WYL domain 143 313 1.5E-35 T 22-04-2016 IPR026881 WYL domain SCD_RS04960 5f63f2b9d25bdf3a8040ea9d11bbc892 324 Gene3D G3DSA:1.10.10.10 1 63 3.8E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SCD_RS04960 5f63f2b9d25bdf3a8040ea9d11bbc892 324 PANTHER PTHR34580 1 323 1.1E-67 T 22-04-2016 SCD_RS04960 5f63f2b9d25bdf3a8040ea9d11bbc892 324 PANTHER PTHR34580:SF3 1 323 1.1E-67 T 22-04-2016 SCD_RS11640 b6d25d51c8f0dc5a6639d44ff3708448 105 Pfam PF11743 Protein of unknown function (DUF3301) 6 100 1.1E-31 T 22-04-2016 IPR021732 Protein of unknown function DUF3301 SCD_RS07830 079a50ae03aaa6edf1a2b5eb0e4c9954 146 Pfam PF10116 Protein required for attachment to host cells 5 140 4.5E-42 T 22-04-2016 IPR019291 Host attachment protein SCD_RS00460 b460949dd25d91d4ae3c678edb7c4d26 207 Pfam PF13511 Domain of unknown function (DUF4124) 10 57 5.3E-10 T 22-04-2016 IPR025392 Domain of unknown function DUF4124 SCD_RS02740 e53cc2eea3318e7ac60e4563c9b2b200 122 Gene3D G3DSA:2.60.320.10 34 111 5.0E-19 T 22-04-2016 IPR024045 NusG, domain 2 SCD_RS02740 e53cc2eea3318e7ac60e4563c9b2b200 122 Pfam PF07009 NusG domain II 17 113 4.1E-22 T 22-04-2016 IPR024045 NusG, domain 2 SCD_RS08315 9d74215318e6e46ba6a2d7af28456803 178 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 3 178 1.2E-60 T 22-04-2016 IPR018636 Protein of unknown function DUF2058 SCD_RS15570 cdbc1277d1d3a45191b8dde6e760c065 290 SMART SM00507 16 66 0.006 T 22-04-2016 IPR003615 HNH nuclease SCD_RS13455 09262e1c86e8000d3c12fb51bbb30452 206 TIGRFAM TIGR02807 cas6_cmx6: CRISPR-associated protein Cas6, subtype MYXAN 11 198 4.7E-45 T 22-04-2016 IPR014174 CRISPR-associated protein, Cas6-related SCD_RS13455 09262e1c86e8000d3c12fb51bbb30452 206 Pfam PF09559 Cas6 Crispr 13 200 1.4E-59 T 22-04-2016 IPR014174 CRISPR-associated protein, Cas6-related SCD_RS03560 a79e426b6dce40f9c144cbda693a3562 71 Pfam PF05433 Glycine zipper 2TM domain 33 69 1.3E-7 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 SCD_RS05910 b3e8a9da7ccf903cdb625e0ae42f54f0 63 Pfam PF12728 Helix-turn-helix domain 12 57 1.1E-9 T 22-04-2016 SCD_RS00930 b6ff2640117c5dc9f6375d183fc9e593 219 Pfam PF07758 Protein of unknown function (DUF1614) 49 218 1.9E-56 T 22-04-2016 IPR011672 Protein of unknown function DUF1614 SCD_RS03475 d6601c54e12451f64e6f1100578e6825 112 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 42 95 9.3E-14 T 22-04-2016 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter SCD_RS03475 d6601c54e12451f64e6f1100578e6825 112 TIGRFAM TIGR02230 ATPase_gene1: putative F0F1-ATPase subunit 1 99 6.1E-42 T 22-04-2016 IPR011744 F0F1-ATPase subunit, putative SCD_RS15565 7b307a4f81d4ceca25e6445675bc8cdc 129 Pfam PF11304 Protein of unknown function (DUF3106) 1 82 7.1E-26 T 22-04-2016 IPR021455 Protein of unknown function DUF3106 SCD_RS04980 f7d041cecb07cad4166663211d889445 85 SUPERFAMILY SSF143120 1 70 2.22E-8 T 22-04-2016 SCD_RS03775 0bfd1b4ca6d5b915cbce4152bf29dae5 236 Pfam PF10670 Domain of unknown function (DUF4198) 95 213 6.5E-13 T 22-04-2016 IPR019613 Protein of unknown function DUF4198 SCD_RS08555 1453ea311e4f96b7427f8afdc4d9cab3 277 Pfam PF03692 Putative zinc- or iron-chelating domain 31 128 2.5E-10 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein SCD_RS03845 c7c867b14464a4e3255f4746ff981127 272 SUPERFAMILY SSF55486 163 201 7.65E-5 T 22-04-2016 SCD_RS03940 b221cc5b55521231a7474ef9b1de3a49 70 Pfam PF11127 Protein of unknown function (DUF2892) 1 66 1.8E-24 T 22-04-2016 IPR021309 Protein of unknown function DUF2892 SCD_RS05275 c6a1548780406d2d1ddba3c4fa6992c0 258 TIGRFAM TIGR03370 VPLPA-CTERM: VPLPA-CTERM protein sorting domain 234 256 1.8E-7 T 22-04-2016 IPR022472 VPLPA-CTERM protein sorting domain SCD_RS07235 bb338e84d0cc9ff9e19d52aed9787ffc 251 Pfam PF01925 Sulfite exporter TauE/SafE 9 248 1.9E-38 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SCD_RS07235 bb338e84d0cc9ff9e19d52aed9787ffc 251 PANTHER PTHR30269 1 250 1.9E-31 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SCD_RS10365 0e4b75c53ee14282c0456197ea3a92e5 563 Gene3D G3DSA:2.120.10.60 460 546 5.5E-4 T 22-04-2016 SCD_RS10365 0e4b75c53ee14282c0456197ea3a92e5 563 Gene3D G3DSA:2.120.10.60 248 319 5.5E-4 T 22-04-2016 SCD_RS01905 dc24c5def15ec81b15be3355697874a8 64 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 22 55 5.1E-8 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SCD_RS08020 b6f78f124d39a560a6994a7d08d480fe 151 Pfam PF05425 Copper resistance protein D 45 145 1.4E-10 T 22-04-2016 IPR008457 Copper resistance protein D GO:0016021 SCD_RS03285 5636ee705dec4a9aaf8a244e28e91bd0 333 Pfam PF01594 Domain of unknown function DUF20 10 325 2.8E-9 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SCD_RS13965 75f27af2d816cec6cbac1e22f9740581 195 SUPERFAMILY SSF57997 23 93 4.36E-5 T 22-04-2016 SCD_RS06960 0d08740b6cc4ea3e2db4e07d9b0a958f 110 SUPERFAMILY SSF50242 3 99 4.71E-7 T 22-04-2016 IPR008993 Tissue inhibitor of metalloproteinases-like, OB-fold SCD_RS12080 83c207e931548fc45f84d57418708c9c 270 Pfam PF13852 Protein of unknown function (DUF4197) 68 265 6.0E-75 T 22-04-2016 IPR025245 Protein of unknown function DUF4197 SCD_RS06000 70b265c41e7abb75ede838a9d85e99fb 324 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 318 1.8E-29 T 22-04-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 SCD_RS09670 cc9257097fbd00a03a01315070963509 103 PIRSF PIRSF039032 1 102 3.6E-33 T 22-04-2016 IPR009387 Toxin HigB-2 SCD_RS06570 7b4fa5e4097b39ce94f5d3f4f5d6ccd1 165 Gene3D G3DSA:3.30.1360.100 85 163 8.5E-14 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain SCD_RS06570 7b4fa5e4097b39ce94f5d3f4f5d6ccd1 165 SUPERFAMILY SSF103054 85 163 9.15E-13 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain SCD_RS06570 7b4fa5e4097b39ce94f5d3f4f5d6ccd1 165 Pfam PF04612 Type II secretion system (T2SS), protein M 3 161 4.7E-38 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 SCD_RS06575 8b6e6c14090787fb0c635a8743e3fdc0 266 Pfam PF01203 Type II secretion system (T2SS), protein N 48 257 1.6E-33 T 22-04-2016 IPR022792 Type II secretion system, protein N SCD_RS14310 d2535b3465e89c5b3346378c91ec5042 533 Pfam PF09594 Protein of unknown function (DUF2029) 113 340 1.7E-7 T 22-04-2016 IPR018584 Glycosyltransferase family 87 GO:0016758 SCD_RS00140 c4bb40c849272764cff66610dc1021d7 226 Pfam PF09955 Predicted integral membrane protein (DUF2189) 37 160 4.5E-25 T 22-04-2016 IPR018692 Predicted integral membrane protein DUF2189 SCD_RS00135 ade3ee05f5f6a365c5455123944f3a07 129 Pfam PF04892 VanZ like family 37 110 1.5E-7 T 22-04-2016 IPR006976 VanZ-like SCD_RS07205 6c2e88370839e53905ce5780c0ad4ccc 154 Pfam PF07813 LTXXQ motif family protein 49 146 1.1E-16 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 SCD_RS03670 e03f9f0933243020b1aa5e0848fa1e44 252 Pfam PF11924 Invasin beta-domain of outer membrane 25 228 1.9E-23 T 22-04-2016 IPR024519 Invasin beta-domain of outer membrane SCD_RS12750 584e928e1360bbe863e694db0cfcbd66 201 PANTHER PTHR41729:SF1 4 201 1.2E-57 T 22-04-2016 SCD_RS12750 584e928e1360bbe863e694db0cfcbd66 201 PANTHER PTHR41729 4 201 1.2E-57 T 22-04-2016 SCD_RS12750 584e928e1360bbe863e694db0cfcbd66 201 Pfam PF13875 Domain of unknown function (DUF4202) 10 182 6.6E-69 T 22-04-2016 IPR025255 Protein of unknown function DUF4202 SCD_RS04300 77fcf0bc30ee0de91b38c2f62f8253eb 110 Pfam PF03413 Peptidase propeptide and YPEB domain 38 94 1.7E-10 T 22-04-2016 IPR025711 PepSY domain SCD_RS00235 5e9d0c56e427d97cd0b1498df4facedb 114 Pfam PF11191 Protein of unknown function (DUF2782) 27 114 4.1E-35 T 22-04-2016 IPR021357 Protein of unknown function DUF2782 SCD_RS11375 eb21a9c35fae985bde339443a5113bde 163 Gene3D G3DSA:1.10.357.10 10 147 3.8E-4 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SCD_RS12240 f85a6174d986dc296f8f61f9cf71f142 146 Pfam PF05258 Protein of unknown function (DUF721) 17 91 8.3E-12 T 22-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 SCD_RS05330 31fcf26cf7cc061f19a6ce80231648bd 124 SMART SM00465 21 112 0.0024 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SCD_RS09970 7b5705a707a6fa19c73181a7ad7baa93 322 Pfam PF09828 Chromate resistance exported protein 187 314 2.2E-46 T 22-04-2016 IPR018634 Chromate resistance exported protein SCD_RS09840 764130dd2022c9582fb7dde58323dec5 140 Pfam PF08897 Domain of unknown function (DUF1841) 5 139 7.8E-61 T 22-04-2016 IPR014993 Protein of unknown function DUF1841 SCD_RS11730 4d2d8fd5d06cb2c183a71400c81cb091 112 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 15 104 2.0E-25 T 22-04-2016 IPR009241 Toxin HigB-like SCD_RS01770 e3a8755e4faa98863d0607b8d3a13e4b 275 Pfam PF12679 ABC-2 family transporter protein 8 274 2.9E-15 T 22-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 SCD_RS09165 1e8f5325497c19c7a697ef75c24ce6ff 100 Pfam PF11604 Copper binding periplasmic protein CusF 31 98 3.2E-27 T 22-04-2016 IPR021647 Copper binding periplasmic protein CusF SCD_RS06340 11ea47db56085f4e93ff4ae3deae69ae 154 Pfam PF13511 Domain of unknown function (DUF4124) 10 61 1.3E-12 T 22-04-2016 IPR025392 Domain of unknown function DUF4124 SCD_RS14005 c44ba9e9000084f59412affeb097a4cb 260 TIGRFAM TIGR03370 VPLPA-CTERM: VPLPA-CTERM protein sorting domain 235 258 1.0E-8 T 22-04-2016 IPR022472 VPLPA-CTERM protein sorting domain SCD_RS05295 0446decfb95f5c3c9e53a767a3f5cde1 491 Gene3D G3DSA:3.40.50.300 195 323 7.5E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SCD_RS05380 fcab1190e5b968e5234c04d975acd613 295 Pfam PF01435 Peptidase family M48 146 254 3.4E-7 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SCD_RS05380 fcab1190e5b968e5234c04d975acd613 295 Gene3D G3DSA:3.30.2010.10 97 180 5.1E-5 T 22-04-2016 SCD_RS05900 44bb20c121e6ad8a12445a1e4fa1f985 349 Pfam PF01076 Plasmid recombination enzyme 2 180 7.8E-19 T 22-04-2016 IPR001668 Plasmid recombination enzyme GO:0003677|GO:0005727|GO:0006310 SCD_RS13325 b3edf53c5aa719477b3347c99d64b312 72 Pfam PF11127 Protein of unknown function (DUF2892) 2 61 1.7E-16 T 22-04-2016 IPR021309 Protein of unknown function DUF2892 SCD_RS13005 a6ae70a7729afcc4c8af08703ef84730 276 Pfam PF14238 Domain of unknown function (DUF4340) 66 203 2.6E-10 T 22-04-2016 IPR025641 Domain of unknown function DUF4340 SCD_RS10195 cc59121bdd02bfa713c5d4cb153b9f13 133 Pfam PF07179 SseB protein N-terminal domain 16 130 1.0E-14 T 22-04-2016 IPR009839 SseB protein N-terminal domain