CAP31_RS00105	PWY-6823	molybdenum cofactor biosynthesis
CAP31_RS00105	PWY-6891	thiazole biosynthesis II (Bacillus)
CAP31_RS00105	PWY-6892	thiazole biosynthesis I (E. coli)
CAP31_RS00105	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CAP31_RS00190	PWY-6823	molybdenum cofactor biosynthesis
CAP31_RS00190	PWY-6891	thiazole biosynthesis II (Bacillus)
CAP31_RS00190	PWY-6892	thiazole biosynthesis I (E. coli)
CAP31_RS00190	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CAP31_RS00225	PWY-3081	L-lysine biosynthesis V
CAP31_RS00225	PWY-6871	3-methylbutanol biosynthesis
CAP31_RS00225	PWY-7710	CAP31_RS00225
CAP31_RS00230	PWY-6936	seleno-amino acid biosynthesis
CAP31_RS00230	PWY-7274	D-cycloserine biosynthesis
CAP31_RS00275	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CAP31_RS00275	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CAP31_RS00275	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CAP31_RS00285	PWY-6123	inosine-5'-phosphate biosynthesis I
CAP31_RS00285	PWY-6124	inosine-5'-phosphate biosynthesis II
CAP31_RS00285	PWY-7234	inosine-5'-phosphate biosynthesis III
CAP31_RS00305	PWY-381	nitrate reduction II (assimilatory)
CAP31_RS00305	PWY-5675	nitrate reduction V (assimilatory)
CAP31_RS00305	PWY-6549	L-glutamine biosynthesis III
CAP31_RS00305	PWY-6963	ammonia assimilation cycle I
CAP31_RS00305	PWY-6964	ammonia assimilation cycle II
CAP31_RS00315	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CAP31_RS00330	PWY-7039	phosphatidate metabolism, as a signaling molecule
CAP31_RS00355	PWY-5964	guanylyl molybdenum cofactor biosynthesis
CAP31_RS00355	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
CAP31_RS00435	PWY-5101	L-isoleucine biosynthesis II
CAP31_RS00435	PWY-5103	L-isoleucine biosynthesis III
CAP31_RS00435	PWY-5104	L-isoleucine biosynthesis IV
CAP31_RS00435	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CAP31_RS00510	PWY-2941	L-lysine biosynthesis II
CAP31_RS00510	PWY-2942	L-lysine biosynthesis III
CAP31_RS00510	PWY-5097	L-lysine biosynthesis VI
CAP31_RS00590	PWY-5344	L-homocysteine biosynthesis
CAP31_RS00845	PWY-5269	cardiolipin biosynthesis II
CAP31_RS00845	PWY-5668	cardiolipin biosynthesis I
CAP31_RS00880	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
CAP31_RS00880	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CAP31_RS00910	PWY-1042	glycolysis IV (plant cytosol)
CAP31_RS00910	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CAP31_RS00910	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAP31_RS00910	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAP31_RS00910	PWY-7385	1,3-propanediol biosynthesis (engineered)
CAP31_RS00915	PWY-1042	glycolysis IV (plant cytosol)
CAP31_RS00915	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CAP31_RS00915	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAP31_RS00915	PWY-5723	Rubisco shunt
CAP31_RS00915	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAP31_RS00915	PWY-6886	1-butanol autotrophic biosynthesis
CAP31_RS00915	PWY-6901	superpathway of glucose and xylose degradation
CAP31_RS00915	PWY-7003	glycerol degradation to butanol
CAP31_RS00915	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CAP31_RS00915	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CAP31_RS00920	PWY-1042	glycolysis IV (plant cytosol)
CAP31_RS00920	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAP31_RS00920	PWY-6886	1-butanol autotrophic biosynthesis
CAP31_RS00920	PWY-6901	superpathway of glucose and xylose degradation
CAP31_RS00920	PWY-7003	glycerol degradation to butanol
CAP31_RS00925	PWY-1042	glycolysis IV (plant cytosol)
CAP31_RS00925	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAP31_RS00925	PWY-6901	superpathway of glucose and xylose degradation
CAP31_RS00925	PWY-7003	glycerol degradation to butanol
CAP31_RS00930	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CAP31_RS00930	PWY-5723	Rubisco shunt
CAP31_RS00930	PWY-6891	thiazole biosynthesis II (Bacillus)
CAP31_RS00930	PWY-6892	thiazole biosynthesis I (E. coli)
CAP31_RS00930	PWY-6901	superpathway of glucose and xylose degradation
CAP31_RS00930	PWY-7560	methylerythritol phosphate pathway II
CAP31_RS00945	PWY-2201	folate transformations I
CAP31_RS00950	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CAP31_RS00970	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CAP31_RS00970	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CAP31_RS00985	PWY-6123	inosine-5'-phosphate biosynthesis I
CAP31_RS00985	PWY-7234	inosine-5'-phosphate biosynthesis III
CAP31_RS00990	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CAP31_RS00990	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CAP31_RS01015	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CAP31_RS01015	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CAP31_RS01015	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CAP31_RS01015	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
CAP31_RS01025	PWY-5316	nicotine biosynthesis
CAP31_RS01025	PWY-7342	superpathway of nicotine biosynthesis
CAP31_RS01055	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
CAP31_RS01090	PWY-6832	2-aminoethylphosphonate degradation II
CAP31_RS01200	PWY-2941	L-lysine biosynthesis II
CAP31_RS01200	PWY-5097	L-lysine biosynthesis VI
CAP31_RS01215	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CAP31_RS01215	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
CAP31_RS01225	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CAP31_RS01230	PWY-2201	folate transformations I
CAP31_RS01230	PWY-3841	folate transformations II
CAP31_RS01290	PWY-4983	L-citrulline-nitric oxide cycle
CAP31_RS01290	PWY-4984	urea cycle
CAP31_RS01290	PWY-5	canavanine biosynthesis
CAP31_RS01290	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CAP31_RS01290	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CAP31_RS01340	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CAP31_RS01340	PWY-6416	quinate degradation II
CAP31_RS01340	PWY-6707	gallate biosynthesis
CAP31_RS01360	PWY-5350	thiosulfate disproportionation III (rhodanese)
CAP31_RS01410	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CAP31_RS01410	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CAP31_RS01415	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CAP31_RS01415	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CAP31_RS01440	PWY-5667	CDP-diacylglycerol biosynthesis I
CAP31_RS01440	PWY-5981	CDP-diacylglycerol biosynthesis III
CAP31_RS01440	PWY-6453	stigma estolide biosynthesis
CAP31_RS01440	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CAP31_RS01440	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
CAP31_RS01440	PWY-7587	oleate biosynthesis III (cyanobacteria)
CAP31_RS01440	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
CAP31_RS01455	PWY-5686	UMP biosynthesis
CAP31_RS01460	PWY-2201	folate transformations I
CAP31_RS01470	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
CAP31_RS01485	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
CAP31_RS01485	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
CAP31_RS01485	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
CAP31_RS01485	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
CAP31_RS01485	PWY-6978	plastoquinol-9 biosynthesis II
CAP31_RS01570	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CAP31_RS01570	PWY-3162	L-tryptophan degradation V (side chain pathway)
CAP31_RS01570	PWY-5057	L-valine degradation II
CAP31_RS01570	PWY-5076	L-leucine degradation III
CAP31_RS01570	PWY-5078	L-isoleucine degradation II
CAP31_RS01570	PWY-5079	L-phenylalanine degradation III
CAP31_RS01570	PWY-5082	L-methionine degradation III
CAP31_RS01570	PWY-5480	pyruvate fermentation to ethanol I
CAP31_RS01570	PWY-5486	pyruvate fermentation to ethanol II
CAP31_RS01570	PWY-5751	phenylethanol biosynthesis
CAP31_RS01570	PWY-6313	serotonin degradation
CAP31_RS01570	PWY-6333	acetaldehyde biosynthesis I
CAP31_RS01570	PWY-6342	noradrenaline and adrenaline degradation
CAP31_RS01570	PWY-6454	vancomycin resistance I
CAP31_RS01570	PWY-6587	pyruvate fermentation to ethanol III
CAP31_RS01570	PWY-6802	salidroside biosynthesis
CAP31_RS01570	PWY-6871	3-methylbutanol biosynthesis
CAP31_RS01570	PWY-6901	superpathway of glucose and xylose degradation
CAP31_RS01570	PWY-7013	L-1,2-propanediol degradation
CAP31_RS01570	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CAP31_RS01570	PWY-7118	chitin degradation to ethanol
CAP31_RS01570	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CAP31_RS01575	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CAP31_RS01650	PWY-6825	phosphatidylcholine biosynthesis V
CAP31_RS01700	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CAP31_RS01705	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CAP31_RS01705	PWY-6578	8-amino-7-oxononanoate biosynthesis III
CAP31_RS01705	PWY-7147	8-amino-7-oxononanoate biosynthesis II
CAP31_RS01710	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CAP31_RS01715	PWY-2201	folate transformations I
CAP31_RS01715	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CAP31_RS01720	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CAP31_RS01740	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CAP31_RS01765	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CAP31_RS01765	PWY-5723	Rubisco shunt
CAP31_RS01955	PWY-7294	xylose degradation IV
CAP31_RS01955	PWY-7295	L-arabinose degradation IV
CAP31_RS02060	PWY-5958	acridone alkaloid biosynthesis
CAP31_RS02060	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CAP31_RS02060	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CAP31_RS02065	PWY-5958	acridone alkaloid biosynthesis
CAP31_RS02065	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CAP31_RS02065	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CAP31_RS02070	PWY-181	photorespiration
CAP31_RS02075	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CAP31_RS02075	PWY-5723	Rubisco shunt
CAP31_RS02130	PWY-2201	folate transformations I
CAP31_RS02150	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CAP31_RS02150	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CAP31_RS02155	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CAP31_RS02155	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CAP31_RS02155	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CAP31_RS02160	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CAP31_RS02160	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CAP31_RS02170	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CAP31_RS02170	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CAP31_RS02170	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CAP31_RS02170	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CAP31_RS02175	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CAP31_RS02175	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CAP31_RS02180	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CAP31_RS02180	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CAP31_RS02185	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CAP31_RS02185	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CAP31_RS02205	PWY-2201	folate transformations I
CAP31_RS02205	PWY-5497	purine nucleobases degradation II (anaerobic)
CAP31_RS02240	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
CAP31_RS02260	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
CAP31_RS02265	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
CAP31_RS02300	PWY-6910	hydroxymethylpyrimidine salvage
CAP31_RS02300	PWY-7356	thiamin salvage IV (yeast)
CAP31_RS02300	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CAP31_RS02305	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CAP31_RS02305	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CAP31_RS02305	PWY-6897	thiamin salvage II
CAP31_RS02305	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CAP31_RS02305	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CAP31_RS02305	PWY-7356	thiamin salvage IV (yeast)
CAP31_RS02305	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CAP31_RS02335	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CAP31_RS02335	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CAP31_RS02375	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CAP31_RS02415	PWY-6825	phosphatidylcholine biosynthesis V
CAP31_RS02430	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CAP31_RS02435	PWY-3341	L-proline biosynthesis III
CAP31_RS02435	PWY-4981	L-proline biosynthesis II (from arginine)
CAP31_RS02435	PWY-6344	L-ornithine degradation II (Stickland reaction)
CAP31_RS02465	PWY-6825	phosphatidylcholine biosynthesis V
CAP31_RS02475	PWY-5381	pyridine nucleotide cycling (plants)
CAP31_RS02475	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CAP31_RS02480	PWY-3341	L-proline biosynthesis III
CAP31_RS02480	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CAP31_RS02505	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CAP31_RS02505	PWY-6148	tetrahydromethanopterin biosynthesis
CAP31_RS02505	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CAP31_RS02505	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CAP31_RS02685	PWY-6012	acyl carrier protein metabolism I
CAP31_RS02685	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CAP31_RS02690	PWY-6902	chitin degradation II
CAP31_RS02715	PWY-5269	cardiolipin biosynthesis II
CAP31_RS02715	PWY-5668	cardiolipin biosynthesis I
CAP31_RS02745	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CAP31_RS02745	PWY-5686	UMP biosynthesis
CAP31_RS02745	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CAP31_RS02750	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CAP31_RS02750	PWY-5686	UMP biosynthesis
CAP31_RS02750	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CAP31_RS02780	PWY-6614	tetrahydrofolate biosynthesis
CAP31_RS02785	PWY-6749	CMP-legionaminate biosynthesis I
CAP31_RS02810	PWY-1042	glycolysis IV (plant cytosol)
CAP31_RS02810	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAP31_RS02810	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAP31_RS02810	PWY-7003	glycerol degradation to butanol
CAP31_RS02885	PWY-3781	aerobic respiration I (cytochrome c)
CAP31_RS02885	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CAP31_RS02885	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
CAP31_RS02885	PWY-6692	Fe(II) oxidation
CAP31_RS02940	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CAP31_RS02945	PWY-2941	L-lysine biosynthesis II
CAP31_RS02945	PWY-2942	L-lysine biosynthesis III
CAP31_RS02945	PWY-5097	L-lysine biosynthesis VI
CAP31_RS02945	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CAP31_RS02945	PWY-6559	spermidine biosynthesis II
CAP31_RS02945	PWY-6562	norspermidine biosynthesis
CAP31_RS02945	PWY-7153	grixazone biosynthesis
CAP31_RS02945	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CAP31_RS02950	PWY-2941	L-lysine biosynthesis II
CAP31_RS02950	PWY-2942	L-lysine biosynthesis III
CAP31_RS02950	PWY-5097	L-lysine biosynthesis VI
CAP31_RS02950	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CAP31_RS02950	PWY-6559	spermidine biosynthesis II
CAP31_RS02950	PWY-6562	norspermidine biosynthesis
CAP31_RS02950	PWY-7153	grixazone biosynthesis
CAP31_RS02950	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CAP31_RS02985	PWY-4381	fatty acid biosynthesis initiation I
CAP31_RS02985	PWY-5743	3-hydroxypropanoate cycle
CAP31_RS02985	PWY-5744	glyoxylate assimilation
CAP31_RS02985	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CAP31_RS02985	PWY-6679	jadomycin biosynthesis
CAP31_RS02985	PWY-6722	candicidin biosynthesis
CAP31_RS02985	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CAP31_RS02990	PWY-2161	folate polyglutamylation
CAP31_RS03005	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CAP31_RS03005	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CAP31_RS03005	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CAP31_RS03005	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CAP31_RS03100	PWY-5532	adenosine nucleotides degradation IV
CAP31_RS03100	PWY-5723	Rubisco shunt
CAP31_RS03105	PWY-5532	adenosine nucleotides degradation IV
CAP31_RS03105	PWY-5723	Rubisco shunt
CAP31_RS03150	PWY-7158	L-phenylalanine degradation V
CAP31_RS03190	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CAP31_RS03345	PWY-5381	pyridine nucleotide cycling (plants)
CAP31_RS03345	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CAP31_RS03345	PWY-6596	adenosine nucleotides degradation I
CAP31_RS03345	PWY-6606	guanosine nucleotides degradation II
CAP31_RS03345	PWY-6607	guanosine nucleotides degradation I
CAP31_RS03345	PWY-6608	guanosine nucleotides degradation III
CAP31_RS03345	PWY-7185	UTP and CTP dephosphorylation I
CAP31_RS03400	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CAP31_RS03410	PWY-3781	aerobic respiration I (cytochrome c)
CAP31_RS03410	PWY-6692	Fe(II) oxidation
CAP31_RS03410	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
CAP31_RS03410	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CAP31_RS03465	PWY-5532	adenosine nucleotides degradation IV
CAP31_RS03465	PWY-5723	Rubisco shunt
CAP31_RS03495	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
CAP31_RS03495	PWY-6167	flavin biosynthesis II (archaea)
CAP31_RS03495	PWY-6168	flavin biosynthesis III (fungi)
CAP31_RS03515	PWY-6854	ethylene biosynthesis III (microbes)
CAP31_RS03525	PWY-4981	L-proline biosynthesis II (from arginine)
CAP31_RS03525	PWY-4984	urea cycle
CAP31_RS03525	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CAP31_RS03530	PWY-4983	L-citrulline-nitric oxide cycle
CAP31_RS03530	PWY-4984	urea cycle
CAP31_RS03530	PWY-5	canavanine biosynthesis
CAP31_RS03530	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CAP31_RS03530	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CAP31_RS03975	PWY-5663	tetrahydrobiopterin biosynthesis I
CAP31_RS03975	PWY-5664	tetrahydrobiopterin biosynthesis II
CAP31_RS03975	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CAP31_RS03975	PWY-6703	preQ<sub>0</sub> biosynthesis
CAP31_RS03975	PWY-6983	tetrahydrobiopterin biosynthesis III
CAP31_RS03975	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CAP31_RS03980	PWY-6891	thiazole biosynthesis II (Bacillus)
CAP31_RS03980	PWY-6892	thiazole biosynthesis I (E. coli)
CAP31_RS03980	PWY-7560	methylerythritol phosphate pathway II
CAP31_RS04165	PWY-6167	flavin biosynthesis II (archaea)
CAP31_RS04165	PWY-6168	flavin biosynthesis III (fungi)
CAP31_RS04165	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CAP31_RS04170	PWY-6167	flavin biosynthesis II (archaea)
CAP31_RS04170	PWY-6168	flavin biosynthesis III (fungi)
CAP31_RS04170	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CAP31_RS04175	PWY-6167	flavin biosynthesis II (archaea)
CAP31_RS04175	PWY-6168	flavin biosynthesis III (fungi)
CAP31_RS04185	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CAP31_RS04185	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CAP31_RS04185	PWY-6896	thiamin salvage I
CAP31_RS04185	PWY-6897	thiamin salvage II
CAP31_RS04190	PWY-5269	cardiolipin biosynthesis II
CAP31_RS04190	PWY-5668	cardiolipin biosynthesis I
CAP31_RS04220	PWY-6004	glycine betaine biosynthesis V (from glycine)
CAP31_RS04290	PWY-5482	pyruvate fermentation to acetate II
CAP31_RS04290	PWY-5485	pyruvate fermentation to acetate IV
CAP31_RS04290	PWY-5497	purine nucleobases degradation II (anaerobic)
CAP31_RS04330	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAP31_RS04380	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
CAP31_RS04380	PWY-5368	dimorphecolate biosynthesis
CAP31_RS04380	PWY-5995	linoleate biosynthesis I (plants)
CAP31_RS04380	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
CAP31_RS04380	PWY-6803	phosphatidylcholine acyl editing
CAP31_RS04380	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
CAP31_RS04380	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CAP31_RS04380	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CAP31_RS04380	PWY-7470	phosphatidylcholine biosynthesis VII
CAP31_RS04380	PWY-7618	ricinoleate biosynthesis
CAP31_RS04445	PWY-5278	sulfite oxidation III
CAP31_RS04445	PWY-5340	sulfate activation for sulfonation
CAP31_RS04445	PWY-6683	sulfate reduction III (assimilatory)
CAP31_RS04445	PWY-6932	selenate reduction
CAP31_RS04450	PWY-5278	sulfite oxidation III
CAP31_RS04450	PWY-5340	sulfate activation for sulfonation
CAP31_RS04450	PWY-6683	sulfate reduction III (assimilatory)
CAP31_RS04450	PWY-6932	selenate reduction
CAP31_RS04580	PWY-5667	CDP-diacylglycerol biosynthesis I
CAP31_RS04580	PWY-5981	CDP-diacylglycerol biosynthesis III
CAP31_RS04585	PWY-7294	xylose degradation IV
CAP31_RS04585	PWY-7295	L-arabinose degradation IV
CAP31_RS04585	PWY-7560	methylerythritol phosphate pathway II
CAP31_RS04610	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CAP31_RS04610	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CAP31_RS04610	PWY-5989	stearate biosynthesis II (bacteria and plants)
CAP31_RS04610	PWY-5994	palmitate biosynthesis I (animals and fungi)
CAP31_RS04610	PWY-6113	superpathway of mycolate biosynthesis
CAP31_RS04610	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CAP31_RS04610	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CAP31_RS04610	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CAP31_RS04610	PWY-7663	gondoate biosynthesis (anaerobic)
CAP31_RS04610	PWY-7664	oleate biosynthesis IV (anaerobic)
CAP31_RS04610	PWYG-321	mycolate biosynthesis
CAP31_RS04620	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
CAP31_RS04620	PWY-622	starch biosynthesis
CAP31_RS04670	PWY-6871	3-methylbutanol biosynthesis
CAP31_RS04715	PWY-5532	adenosine nucleotides degradation IV
CAP31_RS04715	PWY-5723	Rubisco shunt
CAP31_RS04720	PWY-5532	adenosine nucleotides degradation IV
CAP31_RS04720	PWY-5723	Rubisco shunt
CAP31_RS04865	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CAP31_RS04890	PWY-6672	<i>cis</i>-genanyl-CoA degradation
CAP31_RS04890	PWY-7118	chitin degradation to ethanol
CAP31_RS04910	PWY-5057	L-valine degradation II
CAP31_RS04910	PWY-5076	L-leucine degradation III
CAP31_RS04910	PWY-5078	L-isoleucine degradation II
CAP31_RS04910	PWY-5101	L-isoleucine biosynthesis II
CAP31_RS04910	PWY-5103	L-isoleucine biosynthesis III
CAP31_RS04910	PWY-5104	L-isoleucine biosynthesis IV
CAP31_RS04910	PWY-5108	L-isoleucine biosynthesis V
CAP31_RS05015	PWY-4041	&gamma;-glutamyl cycle
CAP31_RS05015	PWY-5826	hypoglycin biosynthesis
CAP31_RS05135	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
CAP31_RS05135	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CAP31_RS05170	PWY-4202	arsenate detoxification I (glutaredoxin)
CAP31_RS05170	PWY-4621	arsenate detoxification II (glutaredoxin)
CAP31_RS05365	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
CAP31_RS05365	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CAP31_RS05365	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
CAP31_RS05485	PWY-2781	<i>cis</i>-zeatin biosynthesis
CAP31_RS05600	PWY-2941	L-lysine biosynthesis II
CAP31_RS05600	PWY-2942	L-lysine biosynthesis III
CAP31_RS05600	PWY-5097	L-lysine biosynthesis VI
CAP31_RS05610	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CAP31_RS05610	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CAP31_RS05610	PWY-6936	seleno-amino acid biosynthesis
CAP31_RS05610	PWY-702	L-methionine biosynthesis II
CAP31_RS05655	PWY-181	photorespiration
CAP31_RS05660	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
CAP31_RS05660	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
CAP31_RS05660	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
CAP31_RS05660	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
CAP31_RS05660	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
CAP31_RS05660	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
CAP31_RS05660	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
CAP31_RS05660	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
CAP31_RS05660	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
CAP31_RS05660	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
CAP31_RS05680	PWY-6700	queuosine biosynthesis
CAP31_RS05685	PWY-6700	queuosine biosynthesis
CAP31_RS05735	PWY-3781	aerobic respiration I (cytochrome c)
CAP31_RS05735	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CAP31_RS05735	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CAP31_RS05735	PWY-5690	TCA cycle II (plants and fungi)
CAP31_RS05735	PWY-6728	methylaspartate cycle
CAP31_RS05735	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAP31_RS05735	PWY-7254	TCA cycle VII (acetate-producers)
CAP31_RS05735	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CAP31_RS05750	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CAP31_RS05755	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CAP31_RS05760	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CAP31_RS05800	PWY-3801	sucrose degradation II (sucrose synthase)
CAP31_RS05800	PWY-5054	sorbitol biosynthesis I
CAP31_RS05800	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
CAP31_RS05800	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CAP31_RS05800	PWY-5659	GDP-mannose biosynthesis
CAP31_RS05800	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAP31_RS05800	PWY-621	sucrose degradation III (sucrose invertase)
CAP31_RS05800	PWY-622	starch biosynthesis
CAP31_RS05800	PWY-6981	chitin biosynthesis
CAP31_RS05800	PWY-6992	1,5-anhydrofructose degradation
CAP31_RS05800	PWY-7238	sucrose biosynthesis II
CAP31_RS05800	PWY-7347	sucrose biosynthesis III
CAP31_RS05800	PWY-7385	1,3-propanediol biosynthesis (engineered)
CAP31_RS05935	PWY-381	nitrate reduction II (assimilatory)
CAP31_RS05935	PWY-5675	nitrate reduction V (assimilatory)
CAP31_RS05935	PWY-6549	L-glutamine biosynthesis III
CAP31_RS05935	PWY-6963	ammonia assimilation cycle I
CAP31_RS05935	PWY-6964	ammonia assimilation cycle II
CAP31_RS06105	PWY-2622	trehalose biosynthesis IV
CAP31_RS06115	PWY-622	starch biosynthesis
CAP31_RS06125	PWY-2661	trehalose biosynthesis V
CAP31_RS06125	PWY-6902	chitin degradation II
CAP31_RS06130	PWY-2661	trehalose biosynthesis V
CAP31_RS06130	PWY-5941	glycogen degradation II (eukaryotic)
CAP31_RS06130	PWY-6724	starch degradation II
CAP31_RS06130	PWY-6737	starch degradation V
CAP31_RS06130	PWY-7238	sucrose biosynthesis II
CAP31_RS06275	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CAP31_RS06275	PWY-6855	chitin degradation I (archaea)
CAP31_RS06275	PWY-6906	chitin derivatives degradation
CAP31_RS06320	PWY-5686	UMP biosynthesis
CAP31_RS06345	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CAP31_RS06385	PWY-3821	galactose degradation III
CAP31_RS06385	PWY-6317	galactose degradation I (Leloir pathway)
CAP31_RS06385	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
CAP31_RS06385	PWY-6527	stachyose degradation
CAP31_RS06385	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
CAP31_RS06385	PWY-7344	UDP-D-galactose biosynthesis
CAP31_RS06445	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CAP31_RS06445	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CAP31_RS06445	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CAP31_RS06480	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
CAP31_RS06480	PWY-5368	dimorphecolate biosynthesis
CAP31_RS06480	PWY-5995	linoleate biosynthesis I (plants)
CAP31_RS06480	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
CAP31_RS06480	PWY-6803	phosphatidylcholine acyl editing
CAP31_RS06480	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
CAP31_RS06480	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CAP31_RS06480	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CAP31_RS06480	PWY-7470	phosphatidylcholine biosynthesis VII
CAP31_RS06480	PWY-7618	ricinoleate biosynthesis
CAP31_RS06535	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CAP31_RS06535	PWY-6596	adenosine nucleotides degradation I
CAP31_RS06535	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CAP31_RS06540	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CAP31_RS06545	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CAP31_RS06550	PWY-7205	CMP phosphorylation
CAP31_RS06575	PWY-5686	UMP biosynthesis
CAP31_RS06620	PWY-5169	cyanurate degradation
CAP31_RS06620	PWY-5703	urea degradation I
CAP31_RS06625	PWY-5169	cyanurate degradation
CAP31_RS06625	PWY-5703	urea degradation I
CAP31_RS06625	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CAP31_RS06660	PWY-2201	folate transformations I
CAP31_RS06660	PWY-5497	purine nucleobases degradation II (anaerobic)
CAP31_RS06660	PWY-6167	flavin biosynthesis II (archaea)
CAP31_RS06730	PWY-3161	indole-3-acetate biosynthesis III (bacteria)
CAP31_RS06730	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
CAP31_RS06730	PWY-581	indole-3-acetate biosynthesis II
CAP31_RS06730	PWY-7308	acrylonitrile degradation I
CAP31_RS06750	PWY-5704	urea degradation II
CAP31_RS06755	PWY-5704	urea degradation II
CAP31_RS06760	PWY-5704	urea degradation II
CAP31_RS06860	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CAP31_RS06890	PWY-2201	folate transformations I
CAP31_RS06890	PWY-5497	purine nucleobases degradation II (anaerobic)
CAP31_RS06900	PWY-3661	glycine betaine degradation I
CAP31_RS06900	PWY-4722	creatinine degradation II
CAP31_RS06915	PWY-381	nitrate reduction II (assimilatory)
CAP31_RS06915	PWY-5675	nitrate reduction V (assimilatory)
CAP31_RS06915	PWY-6549	L-glutamine biosynthesis III
CAP31_RS06915	PWY-6963	ammonia assimilation cycle I
CAP31_RS06915	PWY-6964	ammonia assimilation cycle II
CAP31_RS07045	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CAP31_RS07250	PWY-5392	reductive TCA cycle II
CAP31_RS07250	PWY-5537	pyruvate fermentation to acetate V
CAP31_RS07250	PWY-5538	pyruvate fermentation to acetate VI
CAP31_RS07250	PWY-5690	TCA cycle II (plants and fungi)
CAP31_RS07250	PWY-5913	TCA cycle VI (obligate autotrophs)
CAP31_RS07250	PWY-6728	methylaspartate cycle
CAP31_RS07250	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAP31_RS07250	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CAP31_RS07390	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CAP31_RS07390	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CAP31_RS07575	PWY-5392	reductive TCA cycle II
CAP31_RS07575	PWY-5537	pyruvate fermentation to acetate V
CAP31_RS07575	PWY-5538	pyruvate fermentation to acetate VI
CAP31_RS07575	PWY-5690	TCA cycle II (plants and fungi)
CAP31_RS07575	PWY-5913	TCA cycle VI (obligate autotrophs)
CAP31_RS07575	PWY-6728	methylaspartate cycle
CAP31_RS07575	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAP31_RS07575	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CAP31_RS07580	PWY-5392	reductive TCA cycle II
CAP31_RS07580	PWY-5537	pyruvate fermentation to acetate V
CAP31_RS07580	PWY-5538	pyruvate fermentation to acetate VI
CAP31_RS07580	PWY-5690	TCA cycle II (plants and fungi)
CAP31_RS07580	PWY-5913	TCA cycle VI (obligate autotrophs)
CAP31_RS07580	PWY-6728	methylaspartate cycle
CAP31_RS07580	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAP31_RS07580	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CAP31_RS07595	PWY-3841	folate transformations II
CAP31_RS07595	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CAP31_RS07595	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CAP31_RS07595	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CAP31_RS07595	PWY-7199	pyrimidine deoxyribonucleosides salvage
CAP31_RS07595	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CAP31_RS07675	PWY-5386	methylglyoxal degradation I
CAP31_RS07725	PWY-7425	2-chloroacrylate degradation I
CAP31_RS07825	PWY-6936	seleno-amino acid biosynthesis
CAP31_RS07865	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CAP31_RS07865	PWY-5723	Rubisco shunt
CAP31_RS07900	PWY-3781	aerobic respiration I (cytochrome c)
CAP31_RS07900	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CAP31_RS07900	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CAP31_RS07900	PWY-5690	TCA cycle II (plants and fungi)
CAP31_RS07900	PWY-6728	methylaspartate cycle
CAP31_RS07900	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAP31_RS07900	PWY-7254	TCA cycle VII (acetate-producers)
CAP31_RS07900	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CAP31_RS07980	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CAP31_RS07980	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CAP31_RS07980	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CAP31_RS07980	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CAP31_RS07980	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CAP31_RS07980	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CAP31_RS07990	PWY-6543	4-aminobenzoate biosynthesis
CAP31_RS07995	PWY-5958	acridone alkaloid biosynthesis
CAP31_RS07995	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CAP31_RS07995	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CAP31_RS08010	PWY-5367	petroselinate biosynthesis
CAP31_RS08010	PWY-5515	L-arabinose degradation II
CAP31_RS08010	PWY-5525	D-glucuronate degradation I
CAP31_RS08010	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CAP31_RS08010	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CAP31_RS08010	PWY-5989	stearate biosynthesis II (bacteria and plants)
CAP31_RS08010	PWY-5994	palmitate biosynthesis I (animals and fungi)
CAP31_RS08010	PWY-6113	superpathway of mycolate biosynthesis
CAP31_RS08010	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CAP31_RS08010	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CAP31_RS08010	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CAP31_RS08010	PWY-7663	gondoate biosynthesis (anaerobic)
CAP31_RS08010	PWY-7664	oleate biosynthesis IV (anaerobic)
CAP31_RS08010	PWYG-321	mycolate biosynthesis
CAP31_RS08015	PWY-4381	fatty acid biosynthesis initiation I
CAP31_RS08015	PWY-6799	fatty acid biosynthesis (plant mitochondria)
CAP31_RS08015	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CAP31_RS08020	PWY-4381	fatty acid biosynthesis initiation I
CAP31_RS08070	PWY-5386	methylglyoxal degradation I
CAP31_RS08100	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CAP31_RS08100	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CAP31_RS08100	PWY-5989	stearate biosynthesis II (bacteria and plants)
CAP31_RS08100	PWY-6113	superpathway of mycolate biosynthesis
CAP31_RS08100	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CAP31_RS08100	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CAP31_RS08100	PWY-7663	gondoate biosynthesis (anaerobic)
CAP31_RS08100	PWY-7664	oleate biosynthesis IV (anaerobic)
CAP31_RS08100	PWYG-321	mycolate biosynthesis
CAP31_RS08230	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CAP31_RS08455	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CAP31_RS08455	PWY-6148	tetrahydromethanopterin biosynthesis
CAP31_RS08455	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CAP31_RS08455	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CAP31_RS08465	PWY-6654	phosphopantothenate biosynthesis III
CAP31_RS08730	PWY-6823	molybdenum cofactor biosynthesis
CAP31_RS08730	PWY-6891	thiazole biosynthesis II (Bacillus)
CAP31_RS08730	PWY-6892	thiazole biosynthesis I (E. coli)
CAP31_RS08730	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CAP31_RS08740	PWY-6936	seleno-amino acid biosynthesis
CAP31_RS08740	PWY-7274	D-cycloserine biosynthesis
CAP31_RS08745	PWY-6004	glycine betaine biosynthesis V (from glycine)
CAP31_RS08750	PWY-2301	<i>myo</i>-inositol biosynthesis
CAP31_RS08750	PWY-4702	phytate degradation I
CAP31_RS08750	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
CAP31_RS08755	PWY-2941	L-lysine biosynthesis II
CAP31_RS08755	PWY-2942	L-lysine biosynthesis III
CAP31_RS08755	PWY-5097	L-lysine biosynthesis VI
CAP31_RS08755	PWY-6559	spermidine biosynthesis II
CAP31_RS08755	PWY-6562	norspermidine biosynthesis
CAP31_RS08755	PWY-7153	grixazone biosynthesis
CAP31_RS08870	PWY-5194	siroheme biosynthesis
CAP31_RS08870	PWY-5441	S-methyl-L-methionine cycle
CAP31_RS08870	PWY-702	L-methionine biosynthesis II
CAP31_RS08870	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CAP31_RS08880	PWY-5278	sulfite oxidation III
CAP31_RS08880	PWY-5340	sulfate activation for sulfonation
CAP31_RS08880	PWY-6683	sulfate reduction III (assimilatory)
CAP31_RS08880	PWY-6932	selenate reduction
CAP31_RS08885	PWY-5278	sulfite oxidation III
CAP31_RS08885	PWY-5340	sulfate activation for sulfonation
CAP31_RS08885	PWY-6683	sulfate reduction III (assimilatory)
CAP31_RS08885	PWY-6932	selenate reduction
CAP31_RS08895	PWY-6683	sulfate reduction III (assimilatory)
CAP31_RS08930	PWY-7429	arsenite oxidation II (respiratory)
CAP31_RS08935	PWY-7429	arsenite oxidation II (respiratory)
CAP31_RS09040	PWY-4621	arsenate detoxification II (glutaredoxin)
CAP31_RS09100	PWY-6823	molybdenum cofactor biosynthesis
CAP31_RS09110	PWY-6823	molybdenum cofactor biosynthesis
CAP31_RS09120	PWY-6823	molybdenum cofactor biosynthesis
CAP31_RS09125	PWY-5964	guanylyl molybdenum cofactor biosynthesis
CAP31_RS09125	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
CAP31_RS09250	PWY-5532	adenosine nucleotides degradation IV
CAP31_RS09255	PWY-7399	methylphosphonate degradation II
CAP31_RS09260	PWY-7399	methylphosphonate degradation II
CAP31_RS09270	PWY-7399	methylphosphonate degradation II
CAP31_RS09285	PWY-7399	methylphosphonate degradation II
CAP31_RS09385	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CAP31_RS09400	PWY-1042	glycolysis IV (plant cytosol)
CAP31_RS09400	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CAP31_RS09400	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAP31_RS09400	PWY-5723	Rubisco shunt
CAP31_RS09400	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAP31_RS09400	PWY-6886	1-butanol autotrophic biosynthesis
CAP31_RS09400	PWY-6901	superpathway of glucose and xylose degradation
CAP31_RS09400	PWY-7003	glycerol degradation to butanol
CAP31_RS09400	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CAP31_RS09400	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CAP31_RS09425	PWY-5392	reductive TCA cycle II
CAP31_RS09425	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CAP31_RS09425	PWY-5690	TCA cycle II (plants and fungi)
CAP31_RS09425	PWY-5913	TCA cycle VI (obligate autotrophs)
CAP31_RS09425	PWY-6728	methylaspartate cycle
CAP31_RS09425	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAP31_RS09425	PWY-7254	TCA cycle VII (acetate-producers)
CAP31_RS09425	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CAP31_RS09445	PWY-7731	CAP31_RS09445
CAP31_RS09455	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CAP31_RS09490	PWY-5316	nicotine biosynthesis
CAP31_RS09490	PWY-5381	pyridine nucleotide cycling (plants)
CAP31_RS09490	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CAP31_RS09490	PWY-7342	superpathway of nicotine biosynthesis
CAP31_RS09530	PWY-7560	methylerythritol phosphate pathway II
CAP31_RS09535	PWY-7560	methylerythritol phosphate pathway II
CAP31_RS09545	PWY-6823	molybdenum cofactor biosynthesis
CAP31_RS09575	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CAP31_RS09575	PWY-5723	Rubisco shunt
CAP31_RS09575	PWY-6891	thiazole biosynthesis II (Bacillus)
CAP31_RS09575	PWY-6892	thiazole biosynthesis I (E. coli)
CAP31_RS09575	PWY-6901	superpathway of glucose and xylose degradation
CAP31_RS09575	PWY-7560	methylerythritol phosphate pathway II
CAP31_RS09580	PWY-1042	glycolysis IV (plant cytosol)
CAP31_RS09580	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CAP31_RS09580	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAP31_RS09580	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAP31_RS09580	PWY-7385	1,3-propanediol biosynthesis (engineered)
CAP31_RS09645	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CAP31_RS09680	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CAP31_RS09690	PWY-5386	methylglyoxal degradation I
CAP31_RS09790	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CAP31_RS09790	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CAP31_RS09790	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CAP31_RS09790	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CAP31_RS09790	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CAP31_RS09790	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CAP31_RS09790	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CAP31_RS09790	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CAP31_RS09795	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CAP31_RS09795	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CAP31_RS09795	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CAP31_RS09795	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CAP31_RS09795	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CAP31_RS09795	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CAP31_RS09795	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CAP31_RS09795	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CAP31_RS09800	PWY-2201	folate transformations I
CAP31_RS09800	PWY-5497	purine nucleobases degradation II (anaerobic)
CAP31_RS09925	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
CAP31_RS09930	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CAP31_RS09930	PWY-6164	3-dehydroquinate biosynthesis I
CAP31_RS09930	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CAP31_RS09940	PWY-3461	L-tyrosine biosynthesis II
CAP31_RS09940	PWY-3462	L-phenylalanine biosynthesis II
CAP31_RS09940	PWY-6120	L-tyrosine biosynthesis III
CAP31_RS09940	PWY-6627	salinosporamide A biosynthesis
CAP31_RS09940	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
CAP31_RS09940	PWY-7626	bacilysin biosynthesis
CAP31_RS09960	PWY-5669	phosphatidylethanolamine biosynthesis I
CAP31_RS09975	PWY-3781	aerobic respiration I (cytochrome c)
CAP31_RS09975	PWY-4521	arsenite oxidation I (respiratory)
CAP31_RS09975	PWY-6692	Fe(II) oxidation
CAP31_RS09975	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CAP31_RS09990	PWY-6749	CMP-legionaminate biosynthesis I
CAP31_RS10015	PWY-5941	glycogen degradation II (eukaryotic)
CAP31_RS10015	PWY-6731	starch degradation III
CAP31_RS10015	PWY-6737	starch degradation V
CAP31_RS10015	PWY-7238	sucrose biosynthesis II
CAP31_RS10110	PWY-6123	inosine-5'-phosphate biosynthesis I
CAP31_RS10110	PWY-6124	inosine-5'-phosphate biosynthesis II
CAP31_RS10110	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CAP31_RS10110	PWY-7234	inosine-5'-phosphate biosynthesis III
CAP31_RS10120	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
CAP31_RS10120	PWY-2201	folate transformations I
CAP31_RS10120	PWY-3841	folate transformations II
CAP31_RS10120	PWY-5030	L-histidine degradation III
CAP31_RS10120	PWY-5497	purine nucleobases degradation II (anaerobic)
CAP31_RS10120	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CAP31_RS10180	PWY-3841	folate transformations II
CAP31_RS10180	PWY-6614	tetrahydrofolate biosynthesis
CAP31_RS10200	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CAP31_RS10200	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CAP31_RS10200	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CAP31_RS10200	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CAP31_RS10200	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CAP31_RS10200	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CAP31_RS10200	PWY-7205	CMP phosphorylation
CAP31_RS10200	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CAP31_RS10200	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CAP31_RS10200	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CAP31_RS10200	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CAP31_RS10200	PWY-7224	purine deoxyribonucleosides salvage
CAP31_RS10200	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CAP31_RS10200	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CAP31_RS10205	PWY-2201	folate transformations I
CAP31_RS10275	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CAP31_RS10285	PWY-5941	glycogen degradation II (eukaryotic)
CAP31_RS10285	PWY-6731	starch degradation III
CAP31_RS10285	PWY-6737	starch degradation V
CAP31_RS10285	PWY-7238	sucrose biosynthesis II
CAP31_RS10290	PWY-622	starch biosynthesis
CAP31_RS10295	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
CAP31_RS10295	PWY-622	starch biosynthesis
CAP31_RS10300	PWY-5941	glycogen degradation II (eukaryotic)
CAP31_RS10300	PWY-6724	starch degradation II
CAP31_RS10300	PWY-6737	starch degradation V
CAP31_RS10300	PWY-7238	sucrose biosynthesis II
CAP31_RS10310	PWY-622	starch biosynthesis
CAP31_RS10315	PWY-2722	trehalose degradation IV
CAP31_RS10315	PWY-2723	trehalose degradation V
CAP31_RS10315	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CAP31_RS10315	PWY-5661	GDP-glucose biosynthesis
CAP31_RS10315	PWY-621	sucrose degradation III (sucrose invertase)
CAP31_RS10315	PWY-7238	sucrose biosynthesis II
CAP31_RS10315	PWY-7385	1,3-propanediol biosynthesis (engineered)
CAP31_RS10320	PWY-3801	sucrose degradation II (sucrose synthase)
CAP31_RS10320	PWY-5054	sorbitol biosynthesis I
CAP31_RS10320	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
CAP31_RS10320	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CAP31_RS10320	PWY-5659	GDP-mannose biosynthesis
CAP31_RS10320	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAP31_RS10320	PWY-621	sucrose degradation III (sucrose invertase)
CAP31_RS10320	PWY-622	starch biosynthesis
CAP31_RS10320	PWY-6981	chitin biosynthesis
CAP31_RS10320	PWY-6992	1,5-anhydrofructose degradation
CAP31_RS10320	PWY-7238	sucrose biosynthesis II
CAP31_RS10320	PWY-7347	sucrose biosynthesis III
CAP31_RS10320	PWY-7385	1,3-propanediol biosynthesis (engineered)
CAP31_RS10360	PWY-5155	&beta;-alanine biosynthesis III
CAP31_RS10400	PWY-6703	preQ<sub>0</sub> biosynthesis
CAP31_RS10405	PWY-6703	preQ<sub>0</sub> biosynthesis
CAP31_RS10465	PWY-6749	CMP-legionaminate biosynthesis I
CAP31_RS10530	PWY-2941	L-lysine biosynthesis II
CAP31_RS10530	PWY-2942	L-lysine biosynthesis III
CAP31_RS10530	PWY-5097	L-lysine biosynthesis VI
CAP31_RS10555	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
CAP31_RS10570	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CAP31_RS10575	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CAP31_RS10605	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CAP31_RS10615	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
CAP31_RS10615	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CAP31_RS10625	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CAP31_RS10625	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CAP31_RS10625	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CAP31_RS10630	PWY-6123	inosine-5'-phosphate biosynthesis I
CAP31_RS10630	PWY-6124	inosine-5'-phosphate biosynthesis II
CAP31_RS10630	PWY-7234	inosine-5'-phosphate biosynthesis III
CAP31_RS10700	PWY-3781	aerobic respiration I (cytochrome c)
CAP31_RS10700	PWY-4521	arsenite oxidation I (respiratory)
CAP31_RS10700	PWY-6692	Fe(II) oxidation
CAP31_RS10700	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CAP31_RS10740	PWY-6823	molybdenum cofactor biosynthesis
CAP31_RS10750	PWY-6823	molybdenum cofactor biosynthesis
CAP31_RS10805	PWY-5913	TCA cycle VI (obligate autotrophs)
CAP31_RS10805	PWY-6549	L-glutamine biosynthesis III
CAP31_RS10805	PWY-6728	methylaspartate cycle
CAP31_RS10805	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAP31_RS10805	PWY-7124	ethylene biosynthesis V (engineered)
CAP31_RS10805	PWY-7254	TCA cycle VII (acetate-producers)
CAP31_RS10805	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CAP31_RS10825	PWY-3221	dTDP-L-rhamnose biosynthesis II
CAP31_RS10825	PWY-6808	dTDP-D-forosamine biosynthesis
CAP31_RS10825	PWY-6942	dTDP-D-desosamine biosynthesis
CAP31_RS10825	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
CAP31_RS10825	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
CAP31_RS10825	PWY-6974	dTDP-L-olivose biosynthesis
CAP31_RS10825	PWY-6976	dTDP-L-mycarose biosynthesis
CAP31_RS10825	PWY-7104	dTDP-L-megosamine biosynthesis
CAP31_RS10825	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
CAP31_RS10825	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
CAP31_RS10825	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
CAP31_RS10825	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
CAP31_RS10825	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
CAP31_RS10825	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
CAP31_RS10825	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
CAP31_RS10825	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
CAP31_RS10825	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
CAP31_RS10825	PWY-7688	CAP31_RS10825
CAP31_RS10830	PWY-3221	dTDP-L-rhamnose biosynthesis II
CAP31_RS10830	PWY-6808	dTDP-D-forosamine biosynthesis
CAP31_RS10830	PWY-6942	dTDP-D-desosamine biosynthesis
CAP31_RS10830	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
CAP31_RS10830	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
CAP31_RS10830	PWY-6974	dTDP-L-olivose biosynthesis
CAP31_RS10830	PWY-6976	dTDP-L-mycarose biosynthesis
CAP31_RS10830	PWY-7104	dTDP-L-megosamine biosynthesis
CAP31_RS10830	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
CAP31_RS10830	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
CAP31_RS10830	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
CAP31_RS10830	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
CAP31_RS10830	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
CAP31_RS10830	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
CAP31_RS10830	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
CAP31_RS10830	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
CAP31_RS10830	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
CAP31_RS10830	PWY-7688	CAP31_RS10830
CAP31_RS11000	PWY-1042	glycolysis IV (plant cytosol)
CAP31_RS11000	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CAP31_RS11000	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAP31_RS11000	PWY-5723	Rubisco shunt
CAP31_RS11000	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAP31_RS11000	PWY-6886	1-butanol autotrophic biosynthesis
CAP31_RS11000	PWY-6901	superpathway of glucose and xylose degradation
CAP31_RS11000	PWY-7003	glycerol degradation to butanol
CAP31_RS11000	PWY-7124	ethylene biosynthesis V (engineered)
CAP31_RS11000	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CAP31_RS11025	PWY-6871	3-methylbutanol biosynthesis
CAP31_RS11030	PWY-5669	phosphatidylethanolamine biosynthesis I
CAP31_RS11035	PWY-5103	L-isoleucine biosynthesis III
CAP31_RS11035	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CAP31_RS11040	PWY-5101	L-isoleucine biosynthesis II
CAP31_RS11040	PWY-5103	L-isoleucine biosynthesis III
CAP31_RS11040	PWY-5104	L-isoleucine biosynthesis IV
CAP31_RS11040	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CAP31_RS11040	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CAP31_RS11040	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CAP31_RS11040	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CAP31_RS11045	PWY-5101	L-isoleucine biosynthesis II
CAP31_RS11045	PWY-5103	L-isoleucine biosynthesis III
CAP31_RS11045	PWY-5104	L-isoleucine biosynthesis IV
CAP31_RS11045	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CAP31_RS11045	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CAP31_RS11045	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CAP31_RS11045	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CAP31_RS11070	PWY-702	L-methionine biosynthesis II
CAP31_RS11090	PWY-5451	acetone degradation I (to methylglyoxal)
CAP31_RS11090	PWY-6588	pyruvate fermentation to acetone
CAP31_RS11090	PWY-6876	isopropanol biosynthesis
CAP31_RS11090	PWY-7466	acetone degradation III (to propane-1,2-diol)
CAP31_RS11095	PWY-6703	preQ<sub>0</sub> biosynthesis
CAP31_RS11100	PWY-5316	nicotine biosynthesis
CAP31_RS11100	PWY-7342	superpathway of nicotine biosynthesis
CAP31_RS11180	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
CAP31_RS11335	PWY-7052	cyanophycin metabolism
CAP31_RS11340	PWY-7052	cyanophycin metabolism
CAP31_RS11370	PWY-5382	hydrogen oxidation II (aerobic, NAD)
CAP31_RS11370	PWY-6758	hydrogen production II
CAP31_RS11445	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CAP31_RS11550	PWY-6700	queuosine biosynthesis
CAP31_RS11565	PWY-1622	formaldehyde assimilation I (serine pathway)
CAP31_RS11565	PWY-181	photorespiration
CAP31_RS11565	PWY-2161	folate polyglutamylation
CAP31_RS11565	PWY-2201	folate transformations I
CAP31_RS11565	PWY-3661	glycine betaine degradation I
CAP31_RS11565	PWY-3661-1	glycine betaine degradation II (mammalian)
CAP31_RS11565	PWY-3841	folate transformations II
CAP31_RS11565	PWY-5497	purine nucleobases degradation II (anaerobic)
CAP31_RS11575	PWY-5525	D-glucuronate degradation I
CAP31_RS11615	PWY-3341	L-proline biosynthesis III
CAP31_RS11615	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CAP31_RS11640	PWY-5723	Rubisco shunt
CAP31_RS11665	PWY-6829	tRNA methylation (yeast)
CAP31_RS11665	PWY-7285	methylwyosine biosynthesis
CAP31_RS11665	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
CAP31_RS11690	PWY-3801	sucrose degradation II (sucrose synthase)
CAP31_RS11690	PWY-6527	stachyose degradation
CAP31_RS11690	PWY-7238	sucrose biosynthesis II
CAP31_RS11690	PWY-7343	UDP-glucose biosynthesis
CAP31_RS11710	PWY-1042	glycolysis IV (plant cytosol)
CAP31_RS11710	PWY-1622	formaldehyde assimilation I (serine pathway)
CAP31_RS11710	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CAP31_RS11710	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAP31_RS11710	PWY-5723	Rubisco shunt
CAP31_RS11710	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAP31_RS11710	PWY-6886	1-butanol autotrophic biosynthesis
CAP31_RS11710	PWY-6901	superpathway of glucose and xylose degradation
CAP31_RS11710	PWY-7003	glycerol degradation to butanol
CAP31_RS11710	PWY-7124	ethylene biosynthesis V (engineered)
CAP31_RS11710	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CAP31_RS11715	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CAP31_RS11715	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CAP31_RS11720	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CAP31_RS11720	PWY-7177	UTP and CTP dephosphorylation II
CAP31_RS11720	PWY-7185	UTP and CTP dephosphorylation I
CAP31_RS11735	PWY-5839	menaquinol-7 biosynthesis
CAP31_RS11735	PWY-5844	menaquinol-9 biosynthesis
CAP31_RS11735	PWY-5849	menaquinol-6 biosynthesis
CAP31_RS11735	PWY-5890	menaquinol-10 biosynthesis
CAP31_RS11735	PWY-5891	menaquinol-11 biosynthesis
CAP31_RS11735	PWY-5892	menaquinol-12 biosynthesis
CAP31_RS11735	PWY-5895	menaquinol-13 biosynthesis
CAP31_RS11760	PWY-6936	seleno-amino acid biosynthesis
CAP31_RS11805	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
CAP31_RS11805	PWY-5739	GDP-D-perosamine biosynthesis
CAP31_RS11805	PWY-5740	GDP-L-colitose biosynthesis
CAP31_RS11805	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
CAP31_RS11805	PWY-7573	GDP-mycosamine biosynthesis
CAP31_RS11825	PWY-5659	GDP-mannose biosynthesis
CAP31_RS11825	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
CAP31_RS11860	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
CAP31_RS11865	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
CAP31_RS11865	PWY-5940	streptomycin biosynthesis
CAP31_RS11870	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CAP31_RS11870	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CAP31_RS11875	PWY-6700	queuosine biosynthesis
CAP31_RS12265	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
CAP31_RS12285	PWY-7560	methylerythritol phosphate pathway II
CAP31_RS12355	PWY-6825	phosphatidylcholine biosynthesis V
CAP31_RS12375	PWY-5686	UMP biosynthesis
CAP31_RS12395	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CAP31_RS12435	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CAP31_RS12435	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CAP31_RS12445	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CAP31_RS12445	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CAP31_RS12450	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CAP31_RS12450	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CAP31_RS12540	PWY-7255	ergothioneine biosynthesis I (bacteria)
CAP31_RS12610	PWY-5667	CDP-diacylglycerol biosynthesis I
CAP31_RS12610	PWY-5981	CDP-diacylglycerol biosynthesis III
CAP31_RS12745	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CAP31_RS12760	PWY-6683	sulfate reduction III (assimilatory)
CAP31_RS12765	PWY-5194	siroheme biosynthesis
CAP31_RS12765	PWY-5441	S-methyl-L-methionine cycle
CAP31_RS12765	PWY-702	L-methionine biosynthesis II
CAP31_RS12765	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CAP31_RS12860	PWY-6891	thiazole biosynthesis II (Bacillus)
CAP31_RS12860	PWY-6892	thiazole biosynthesis I (E. coli)
CAP31_RS12890	PWY-6825	phosphatidylcholine biosynthesis V
CAP31_RS12945	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CAP31_RS12960	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CAP31_RS12960	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CAP31_RS12960	PWY-6897	thiamin salvage II
CAP31_RS12960	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CAP31_RS12960	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CAP31_RS12960	PWY-7356	thiamin salvage IV (yeast)
CAP31_RS12960	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CAP31_RS13035	PWY-6655	xanthan biosynthesis
CAP31_RS13035	PWY-6658	acetan biosynthesis
CAP31_RS13040	PWY-5659	GDP-mannose biosynthesis
CAP31_RS13040	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
CAP31_RS13285	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CAP31_RS13285	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CAP31_RS13395	PWY-6825	phosphatidylcholine biosynthesis V
CAP31_RS13465	PWY-3781	aerobic respiration I (cytochrome c)
CAP31_RS13465	PWY-4521	arsenite oxidation I (respiratory)
CAP31_RS13465	PWY-6692	Fe(II) oxidation
CAP31_RS13465	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CAP31_RS13485	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
CAP31_RS13485	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
CAP31_RS13485	PWY-6148	tetrahydromethanopterin biosynthesis
CAP31_RS13505	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CAP31_RS13505	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CAP31_RS13530	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CAP31_RS13565	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
CAP31_RS13625	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CAP31_RS13625	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CAP31_RS13660	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CAP31_RS13660	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CAP31_RS13755	PWY-5686	UMP biosynthesis
CAP31_RS13760	PWY-5686	UMP biosynthesis
CAP31_RS13785	PWY-2201	folate transformations I
CAP31_RS13785	PWY-3841	folate transformations II
CAP31_RS13800	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CAP31_RS13940	PWY-4381	fatty acid biosynthesis initiation I
CAP31_RS13940	PWY-5743	3-hydroxypropanoate cycle
CAP31_RS13940	PWY-5744	glyoxylate assimilation
CAP31_RS13940	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CAP31_RS13940	PWY-6679	jadomycin biosynthesis
CAP31_RS13940	PWY-6722	candicidin biosynthesis
CAP31_RS13940	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CAP31_RS13955	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAP31_RS14015	PWY-6164	3-dehydroquinate biosynthesis I
CAP31_RS14080	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
CAP31_RS14080	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CAP31_RS14125	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
CAP31_RS14125	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
CAP31_RS14125	PWY-6268	adenosylcobalamin salvage from cobalamin
CAP31_RS14125	PWY-6269	adenosylcobalamin salvage from cobinamide II
CAP31_RS14135	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
CAP31_RS14135	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
CAP31_RS14145	PWY-5443	aminopropanol phosphate biosynthesis I
CAP31_RS14155	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
CAP31_RS14155	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
CAP31_RS14155	PWY-6269	adenosylcobalamin salvage from cobinamide II
CAP31_RS14185	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
CAP31_RS14185	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
CAP31_RS14185	PWY-6269	adenosylcobalamin salvage from cobinamide II
CAP31_RS14190	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
CAP31_RS14190	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
CAP31_RS14190	PWY-6269	adenosylcobalamin salvage from cobinamide II
CAP31_RS14270	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CAP31_RS14270	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CAP31_RS14335	PWY-6749	CMP-legionaminate biosynthesis I
CAP31_RS14340	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CAP31_RS14340	PWY-5667	CDP-diacylglycerol biosynthesis I
CAP31_RS14340	PWY-6453	stigma estolide biosynthesis
CAP31_RS14340	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CAP31_RS14340	PWY-7587	oleate biosynthesis III (cyanobacteria)
CAP31_RS14360	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CAP31_RS14360	PWY-6416	quinate degradation II
CAP31_RS14360	PWY-6707	gallate biosynthesis
CAP31_RS14395	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CAP31_RS14405	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CAP31_RS14570	PWY-4621	arsenate detoxification II (glutaredoxin)
