CAP31_RS00005 SM00382 ATPases associated with a variety of cellular activities CAP31_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain CAP31_RS00010 SM00480 DNA polymerase III beta subunit CAP31_RS00015 SM00387 Histidine kinase-like ATPases CAP31_RS00015 SM00433 TopoisomeraseII CAP31_RS00180 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CAP31_RS00180 SM00382 ATPases associated with a variety of cellular activities CAP31_RS00185 SM00834 Putative regulatory protein CAP31_RS00220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAP31_RS00220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAP31_RS00240 SM00893 Electron transfer flavoprotein domain CAP31_RS00245 SM00893 Electron transfer flavoprotein domain CAP31_RS00290 SM00382 ATPases associated with a variety of cellular activities CAP31_RS00290 SM00448 cheY-homologous receiver domain CAP31_RS00295 SM00091 PAS domain CAP31_RS00295 SM00387 Histidine kinase-like ATPases CAP31_RS00295 SM00388 His Kinase A (phosphoacceptor) domain CAP31_RS00305 SM01230 CAP31_RS00305 CAP31_RS00310 SM00450 Rhodanese Homology Domain CAP31_RS00400 SM00938 Nitrogen regulatory protein P-II CAP31_RS00465 SM00382 ATPases associated with a variety of cellular activities CAP31_RS00470 SM00382 ATPases associated with a variety of cellular activities CAP31_RS00515 SM01219 CAP31_RS00515 CAP31_RS00580 SM00052 Putative diguanylate phosphodiesterase CAP31_RS00580 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CAP31_RS00580 SM00091 PAS domain CAP31_RS00580 SM00267 diguanylate cyclase CAP31_RS00605 SM00382 ATPases associated with a variety of cellular activities CAP31_RS00635 SM00257 Lysin motif CAP31_RS00650 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CAP31_RS00650 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CAP31_RS00650 SM00493 CAP31_RS00650 CAP31_RS00660 SM00052 Putative diguanylate phosphodiesterase CAP31_RS00660 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CAP31_RS00660 SM00091 PAS domain CAP31_RS00660 SM00267 diguanylate cyclase CAP31_RS00680 SM00448 cheY-homologous receiver domain CAP31_RS00680 SM00862 Transcriptional regulatory protein, C terminal CAP31_RS00685 SM00387 Histidine kinase-like ATPases CAP31_RS00685 SM00388 His Kinase A (phosphoacceptor) domain CAP31_RS00735 SM00448 cheY-homologous receiver domain CAP31_RS00820 SM00382 ATPases associated with a variety of cellular activities CAP31_RS00830 SM00448 cheY-homologous receiver domain CAP31_RS00835 SM00387 Histidine kinase-like ATPases CAP31_RS00850 SM00100 Cyclic nucleotide-monophosphate binding domain CAP31_RS00855 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. CAP31_RS00865 SM00450 Rhodanese Homology Domain CAP31_RS00890 SM00729 Elongator protein 3, MiaB family, Radical SAM CAP31_RS00905 SM01091 Transporter associated domain CAP31_RS00925 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CAP31_RS00930 SM00861 Transketolase, pyrimidine binding domain CAP31_RS00960 SM00052 Putative diguanylate phosphodiesterase CAP31_RS00960 SM00091 PAS domain CAP31_RS00960 SM00267 diguanylate cyclase CAP31_RS00960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAP31_RS00965 SM00382 ATPases associated with a variety of cellular activities CAP31_RS00985 SM01001 AIR carboxylase CAP31_RS01045 SM00028 Tetratricopeptide repeats CAP31_RS01045 SM00386 HAT (Half-A-TPR) repeats CAP31_RS01055 SM00633 Glycosyl hydrolase family 10 CAP31_RS01060 SM00984 UDP binding domain CAP31_RS01105 SM00100 Cyclic nucleotide-monophosphate binding domain CAP31_RS01125 SM00421 helix_turn_helix, Lux Regulon CAP31_RS01125 SM00448 cheY-homologous receiver domain CAP31_RS01145 SM00836 DALR anticodon binding domain CAP31_RS01145 SM01016 Arginyl tRNA synthetase N terminal dom CAP31_RS01150 SM00487 DEAD-like helicases superfamily CAP31_RS01150 SM00490 helicase superfamily c-terminal domain CAP31_RS01160 SM00014 Acid phosphatase homologues CAP31_RS01225 SM00996 S-adenosyl-L-homocysteine hydrolase CAP31_RS01225 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CAP31_RS01300 SM00448 cheY-homologous receiver domain CAP31_RS01300 SM00850 LytTr DNA-binding domain CAP31_RS01305 SM00052 Putative diguanylate phosphodiesterase CAP31_RS01305 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CAP31_RS01305 SM00091 PAS domain CAP31_RS01305 SM00267 diguanylate cyclase CAP31_RS01325 SM00014 Acid phosphatase homologues CAP31_RS01340 SM01116 CAP31_RS01340 CAP31_RS01345 SM00382 ATPases associated with a variety of cellular activities CAP31_RS01360 SM00450 Rhodanese Homology Domain CAP31_RS01365 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CAP31_RS01365 SM00382 ATPases associated with a variety of cellular activities CAP31_RS01440 SM00563 Phosphate acyltransferases CAP31_RS01475 SM00749 bacterial OsmY and nodulation domain CAP31_RS01505 SM00382 ATPases associated with a variety of cellular activities CAP31_RS01525 SM00567 E-Z type HEAT repeats CAP31_RS01540 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAP31_RS01540 SM00866 CAP31_RS01540 CAP31_RS01550 SM00347 helix_turn_helix multiple antibiotic resistance protein CAP31_RS01570 SM00829 Enoylreductase CAP31_RS01580 SM00342 helix_turn_helix, arabinose operon control protein CAP31_RS01590 SM00347 helix_turn_helix multiple antibiotic resistance protein CAP31_RS01600 SM00867 YceI-like domain CAP31_RS01605 SM00867 YceI-like domain CAP31_RS01615 SM00260 Two component signalling adaptor domain CAP31_RS01620 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAP31_RS01620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAP31_RS01625 SM00052 Putative diguanylate phosphodiesterase CAP31_RS01625 SM00267 diguanylate cyclase CAP31_RS01635 SM00478 endonuclease III CAP31_RS01680 SM00671 Sel1-like repeats. CAP31_RS01700 SM00729 Elongator protein 3, MiaB family, Radical SAM CAP31_RS01700 SM00876 Biotin and Thiamin Synthesis associated domain CAP31_RS01725 SM00052 Putative diguanylate phosphodiesterase CAP31_RS01725 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CAP31_RS01725 SM00091 PAS domain CAP31_RS01725 SM00267 diguanylate cyclase CAP31_RS01735 SM00925 MltA specific insert domain CAP31_RS01740 SM00357 Cold shock protein domain CAP31_RS01740 SM00382 ATPases associated with a variety of cellular activities CAP31_RS01740 SM00959 Rho termination factor, N-terminal domain CAP31_RS01800 SM01091 Transporter associated domain CAP31_RS01810 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CAP31_RS01825 SM00450 Rhodanese Homology Domain CAP31_RS01885 SM00729 Elongator protein 3, MiaB family, Radical SAM CAP31_RS01900 SM00729 Elongator protein 3, MiaB family, Radical SAM CAP31_RS01915 SM00448 cheY-homologous receiver domain CAP31_RS01915 SM00862 Transcriptional regulatory protein, C terminal CAP31_RS01920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAP31_RS01920 SM00387 Histidine kinase-like ATPases CAP31_RS01920 SM00388 His Kinase A (phosphoacceptor) domain CAP31_RS01940 SM00028 Tetratricopeptide repeats CAP31_RS01950 SM00650 Ribosomal RNA adenine dimethylases CAP31_RS01985 SM01011 Aminopeptidase P, N-terminal domain CAP31_RS02025 SM00382 ATPases associated with a variety of cellular activities CAP31_RS02195 SM00842 Cell division protein FtsA CAP31_RS02200 SM00864 Tubulin/FtsZ family, GTPase domain CAP31_RS02200 SM00865 Tubulin/FtsZ family, C-terminal domain CAP31_RS02220 SM00957 SecA DEAD-like domain CAP31_RS02220 SM00958 SecA preprotein cross-linking domain CAP31_RS02250 SM00450 Rhodanese Homology Domain CAP31_RS02270 SM00073 Histidine Phosphotransfer domain CAP31_RS02270 SM00260 Two component signalling adaptor domain CAP31_RS02270 SM00387 Histidine kinase-like ATPases CAP31_RS02270 SM00448 cheY-homologous receiver domain CAP31_RS02270 SM01231 CAP31_RS02270 CAP31_RS02275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAP31_RS02280 SM00260 Two component signalling adaptor domain CAP31_RS02285 SM00448 cheY-homologous receiver domain CAP31_RS02290 SM00448 cheY-homologous receiver domain CAP31_RS02335 SM01004 Delta-aminolevulinic acid dehydratase CAP31_RS02350 SM00842 Cell division protein FtsA CAP31_RS02370 SM00965 Secretin and TonB N terminus short domain CAP31_RS02415 SM00981 CAP31_RS02415 CAP31_RS02425 SM00382 ATPases associated with a variety of cellular activities CAP31_RS02455 SM00316 Ribosomal protein S1-like RNA-binding domain CAP31_RS02505 SM00905 Dihydroneopterin aldolase CAP31_RS02535 SM00316 Ribosomal protein S1-like RNA-binding domain CAP31_RS02695 SM00986 Uracil DNA glycosylase superfamily CAP31_RS02695 SM00987 UreE urease accessory protein, C-terminal domain CAP31_RS02700 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CAP31_RS02700 SM00465 GIY-YIG type nucleases (URI domain) CAP31_RS02730 SM00450 Rhodanese Homology Domain CAP31_RS02740 SM00481 DNA polymerase alpha chain like domain CAP31_RS02745 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CAP31_RS02750 SM00851 MGS-like domain CAP31_RS02750 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CAP31_RS02765 SM01103 CAP31_RS02765 CAP31_RS02775 SM00382 ATPases associated with a variety of cellular activities CAP31_RS02790 SM00382 ATPases associated with a variety of cellular activities CAP31_RS02850 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CAP31_RS02855 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CAP31_RS02905 SM00897 FIST N domain CAP31_RS02905 SM01204 CAP31_RS02905 CAP31_RS02910 SM00478 endonuclease III CAP31_RS02940 SM01329 CAP31_RS02940 CAP31_RS02945 SM00859 Semialdehyde dehydrogenase, NAD binding domain CAP31_RS02950 SM00859 Semialdehyde dehydrogenase, NAD binding domain CAP31_RS03035 SM00028 Tetratricopeptide repeats CAP31_RS03040 SM00840 CAP31_RS03040 CAP31_RS03050 SM00967 RNA 2'-O ribose methyltransferase substrate binding CAP31_RS03085 SM00382 ATPases associated with a variety of cellular activities CAP31_RS03105 SM00961 Ribulose bisphosphate carboxylase, small chain CAP31_RS03130 SM00877 CAP31_RS03130 CAP31_RS03135 SM00877 CAP31_RS03135 CAP31_RS03140 SM00877 CAP31_RS03140 CAP31_RS03170 SM00327 von Willebrand factor (vWF) type A domain CAP31_RS03210 SM00363 S4 RNA-binding domain CAP31_RS03235 SM00260 Two component signalling adaptor domain CAP31_RS03235 SM00448 cheY-homologous receiver domain CAP31_RS03300 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CAP31_RS03325 SM00873 B3/4 domain CAP31_RS03325 SM00874 tRNA synthetase B5 domain CAP31_RS03325 SM00896 Ferredoxin-fold anticodon binding domain CAP31_RS03330 SM00411 bacterial (prokaryotic) histone like domain CAP31_RS03335 SM00422 helix_turn_helix, mercury resistance CAP31_RS03355 SM00257 Lysin motif CAP31_RS03395 SM01350 CAP31_RS03395 CAP31_RS03405 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CAP31_RS03455 SM00327 von Willebrand factor (vWF) type A domain CAP31_RS03470 SM01152 CAP31_RS03470 CAP31_RS03495 SM00904 Riboflavin kinase CAP31_RS03540 SM00671 Sel1-like repeats. CAP31_RS03555 SM00116 Domain in cystathionine beta-synthase and other proteins. CAP31_RS03565 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CAP31_RS03565 SM00534 ATPase domain of DNA mismatch repair MUTS family CAP31_RS03575 SM00028 Tetratricopeptide repeats CAP31_RS03625 SM00858 CAP31_RS03625 CAP31_RS03630 SM00382 ATPases associated with a variety of cellular activities CAP31_RS03655 SM00644 CAP31_RS03655 CAP31_RS03670 SM00052 Putative diguanylate phosphodiesterase CAP31_RS03670 SM00091 PAS domain CAP31_RS03670 SM00267 diguanylate cyclase CAP31_RS03740 SM00411 bacterial (prokaryotic) histone like domain CAP31_RS03980 SM00861 Transketolase, pyrimidine binding domain CAP31_RS04005 SM00052 Putative diguanylate phosphodiesterase CAP31_RS04005 SM00267 diguanylate cyclase CAP31_RS04030 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CAP31_RS04030 SM00481 DNA polymerase alpha chain like domain CAP31_RS04030 SM00483 DNA polymerase X family CAP31_RS04050 SM01091 Transporter associated domain CAP31_RS04070 SM00090 RIO-like kinase CAP31_RS04095 SM00829 Enoylreductase CAP31_RS04110 SM01321 CAP31_RS04110 CAP31_RS04150 SM00450 Rhodanese Homology Domain CAP31_RS04200 SM00382 ATPases associated with a variety of cellular activities CAP31_RS04255 SM00422 helix_turn_helix, mercury resistance CAP31_RS04315 SM00271 DnaJ molecular chaperone homology domain CAP31_RS04325 SM00849 Metallo-beta-lactamase superfamily CAP31_RS04325 SM01027 Beta-Casp domain CAP31_RS04335 SM00478 endonuclease III CAP31_RS04345 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAP31_RS04345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAP31_RS04350 SM00316 Ribosomal protein S1-like RNA-binding domain CAP31_RS04350 SM00732 Likely ribonuclease with RNase H fold. CAP31_RS04360 SM00028 Tetratricopeptide repeats CAP31_RS04370 SM01207 CAP31_RS04370 CAP31_RS04385 SM00448 cheY-homologous receiver domain CAP31_RS04385 SM00862 Transcriptional regulatory protein, C terminal CAP31_RS04390 SM00091 PAS domain CAP31_RS04390 SM00387 Histidine kinase-like ATPases CAP31_RS04390 SM00388 His Kinase A (phosphoacceptor) domain CAP31_RS04400 SM00493 CAP31_RS04400 CAP31_RS04410 SM00382 ATPases associated with a variety of cellular activities CAP31_RS04425 SM00400 zinc finger CAP31_RS04425 SM00493 CAP31_RS04425 CAP31_RS04425 SM00766 DNA primase DnaG DnaB-binding CAP31_RS04455 SM00382 ATPases associated with a variety of cellular activities CAP31_RS04460 SM00028 Tetratricopeptide repeats CAP31_RS04470 SM00965 Secretin and TonB N terminus short domain CAP31_RS04535 SM00382 ATPases associated with a variety of cellular activities CAP31_RS04540 SM00052 Putative diguanylate phosphodiesterase CAP31_RS04540 SM00267 diguanylate cyclase CAP31_RS04550 SM00155 Phospholipase D. Active site motifs. CAP31_RS04600 SM00935 Outer membrane protein (OmpH-like) CAP31_RS04635 SM00631 CAP31_RS04635 CAP31_RS04670 SM00917 LeuA allosteric (dimerisation) domain CAP31_RS04675 SM00344 helix_turn_helix ASNC type CAP31_RS04685 SM00244 prohibitin homologues CAP31_RS04690 SM00886 Stress responsive A/B Barrel Domain CAP31_RS04705 SM00327 von Willebrand factor (vWF) type A domain CAP31_RS04715 SM00961 Ribulose bisphosphate carboxylase, small chain CAP31_RS04740 SM00563 Phosphate acyltransferases CAP31_RS04780 SM00822 CAP31_RS04780 CAP31_RS04795 SM00825 Beta-ketoacyl synthase CAP31_RS04810 SM00358 Double-stranded RNA binding motif CAP31_RS04810 SM00535 Ribonuclease III family CAP31_RS04825 SM00838 Elongation factor G C-terminus CAP31_RS04835 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CAP31_RS04920 SM00849 Metallo-beta-lactamase superfamily CAP31_RS04925 SM00346 helix_turn_helix isocitrate lyase regulation CAP31_RS04930 SM00861 Transketolase, pyrimidine binding domain CAP31_RS04965 SM00257 Lysin motif CAP31_RS04985 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CAP31_RS04985 SM00091 PAS domain CAP31_RS04985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAP31_RS04985 SM00387 Histidine kinase-like ATPases CAP31_RS04985 SM00388 His Kinase A (phosphoacceptor) domain CAP31_RS04990 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAP31_RS04990 SM00387 Histidine kinase-like ATPases CAP31_RS04990 SM00388 His Kinase A (phosphoacceptor) domain CAP31_RS04995 SM00387 Histidine kinase-like ATPases CAP31_RS04995 SM00388 His Kinase A (phosphoacceptor) domain CAP31_RS05000 SM00448 cheY-homologous receiver domain CAP31_RS05005 SM00267 diguanylate cyclase CAP31_RS05005 SM00448 cheY-homologous receiver domain CAP31_RS05010 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CAP31_RS05010 SM00448 cheY-homologous receiver domain CAP31_RS05010 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAP31_RS05045 SM00448 cheY-homologous receiver domain CAP31_RS05045 SM00862 Transcriptional regulatory protein, C terminal CAP31_RS05050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAP31_RS05050 SM00387 Histidine kinase-like ATPases CAP31_RS05050 SM00388 His Kinase A (phosphoacceptor) domain CAP31_RS05070 SM00880 CAP31_RS05070 CAP31_RS05110 SM00267 diguanylate cyclase CAP31_RS05115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAP31_RS05115 SM01358 CAP31_RS05115 CAP31_RS05165 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAP31_RS05180 SM00382 ATPases associated with a variety of cellular activities CAP31_RS05190 SM00382 ATPases associated with a variety of cellular activities CAP31_RS05190 SM00843 CAP31_RS05190 CAP31_RS05200 SM00463 Small MutS-related domain CAP31_RS05210 SM00670 Large family of predicted nucleotide-binding domains CAP31_RS05230 SM00091 PAS domain CAP31_RS05230 SM00382 ATPases associated with a variety of cellular activities CAP31_RS05255 SM00953 CAP31_RS05255 CAP31_RS05345 SM00831 Cation transporter/ATPase, N-terminus CAP31_RS05390 SM00450 Rhodanese Homology Domain CAP31_RS05415 SM00487 DEAD-like helicases superfamily CAP31_RS05415 SM00490 helicase superfamily c-terminal domain CAP31_RS05425 SM00849 Metallo-beta-lactamase superfamily CAP31_RS05460 SM00316 Ribosomal protein S1-like RNA-binding domain CAP31_RS05460 SM00322 K homology RNA-binding domain CAP31_RS05465 SM01387 CAP31_RS05465 CAP31_RS05480 SM00671 Sel1-like repeats. CAP31_RS05490 SM00829 Enoylreductase CAP31_RS05505 SM00855 Phosphoglycerate mutase family CAP31_RS05520 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAP31_RS05565 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAP31_RS05570 SM00849 Metallo-beta-lactamase superfamily CAP31_RS05625 SM00052 Putative diguanylate phosphodiesterase CAP31_RS05625 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CAP31_RS05625 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CAP31_RS05625 SM00091 PAS domain CAP31_RS05625 SM00267 diguanylate cyclase CAP31_RS05630 SM00028 Tetratricopeptide repeats CAP31_RS05640 SM00867 YceI-like domain CAP31_RS05675 SM01323 CAP31_RS05675 CAP31_RS05700 SM00220 Serine/Threonine protein kinases, catalytic domain CAP31_RS05705 SM00331 Sigma factor PP2C-like phosphatases CAP31_RS05705 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CAP31_RS05710 SM00240 Forkhead associated domain CAP31_RS05715 SM00260 Two component signalling adaptor domain CAP31_RS05750 SM00861 Transketolase, pyrimidine binding domain CAP31_RS05760 SM00788 Adenylosuccinate synthetase CAP31_RS05775 SM00244 prohibitin homologues CAP31_RS05780 SM00244 prohibitin homologues CAP31_RS05795 SM00052 Putative diguanylate phosphodiesterase CAP31_RS05795 SM00267 diguanylate cyclase CAP31_RS05885 SM00267 diguanylate cyclase CAP31_RS05910 SM00052 Putative diguanylate phosphodiesterase CAP31_RS05910 SM00267 diguanylate cyclase CAP31_RS05925 SM00382 ATPases associated with a variety of cellular activities CAP31_RS05935 SM01230 CAP31_RS05935 CAP31_RS05955 SM00116 Domain in cystathionine beta-synthase and other proteins. CAP31_RS05985 SM00052 Putative diguanylate phosphodiesterase CAP31_RS05985 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CAP31_RS05985 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CAP31_RS05985 SM00091 PAS domain CAP31_RS05985 SM00267 diguanylate cyclase CAP31_RS05985 SM01079 CAP31_RS05985 CAP31_RS05995 SM00073 Histidine Phosphotransfer domain CAP31_RS05995 SM00260 Two component signalling adaptor domain CAP31_RS05995 SM00387 Histidine kinase-like ATPases CAP31_RS05995 SM01231 CAP31_RS05995 CAP31_RS06000 SM00749 bacterial OsmY and nodulation domain CAP31_RS06030 SM00749 bacterial OsmY and nodulation domain CAP31_RS06040 SM00155 Phospholipase D. Active site motifs. CAP31_RS06045 SM00052 Putative diguanylate phosphodiesterase CAP31_RS06050 SM00052 Putative diguanylate phosphodiesterase CAP31_RS06050 SM00091 PAS domain CAP31_RS06050 SM00267 diguanylate cyclase CAP31_RS06100 SM00642 Alpha-amylase domain CAP31_RS06105 SM00642 Alpha-amylase domain CAP31_RS06120 SM00642 Alpha-amylase domain CAP31_RS06125 SM00642 Alpha-amylase domain CAP31_RS06130 SM00642 Alpha-amylase domain CAP31_RS06185 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CAP31_RS06185 SM00091 PAS domain CAP31_RS06185 SM00267 diguanylate cyclase CAP31_RS06190 SM00100 Cyclic nucleotide-monophosphate binding domain CAP31_RS06230 SM00564 beta-propeller repeat CAP31_RS06240 SM00421 helix_turn_helix, Lux Regulon CAP31_RS06290 SM00900 CAP31_RS06290 CAP31_RS06330 SM00861 Transketolase, pyrimidine binding domain CAP31_RS06390 SM00267 diguanylate cyclase CAP31_RS06395 SM00226 Low molecular weight phosphatase family CAP31_RS06400 SM00316 Ribosomal protein S1-like RNA-binding domain CAP31_RS06405 SM00363 S4 RNA-binding domain CAP31_RS06445 SM01211 CAP31_RS06445 CAP31_RS06460 SM00986 Uracil DNA glycosylase superfamily CAP31_RS06460 SM00987 UreE urease accessory protein, C-terminal domain CAP31_RS06475 SM00910 CAP31_RS06475 CAP31_RS06535 SM00116 Domain in cystathionine beta-synthase and other proteins. CAP31_RS06535 SM01240 CAP31_RS06535 CAP31_RS06555 SM00316 Ribosomal protein S1-like RNA-binding domain CAP31_RS06560 SM00411 bacterial (prokaryotic) histone like domain CAP31_RS06570 SM00028 Tetratricopeptide repeats CAP31_RS06575 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CAP31_RS06590 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CAP31_RS06590 SM01080 CAP31_RS06590 CAP31_RS06595 SM00849 Metallo-beta-lactamase superfamily CAP31_RS06605 SM00382 ATPases associated with a variety of cellular activities CAP31_RS06620 SM00796 Allophanate hydrolase subunit 1 CAP31_RS06620 SM00797 Allophanate hydrolase subunit 2 CAP31_RS06620 SM00878 Biotin carboxylase C-terminal domain CAP31_RS06645 SM00052 Putative diguanylate phosphodiesterase CAP31_RS06645 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CAP31_RS06645 SM00091 PAS domain CAP31_RS06645 SM00267 diguanylate cyclase CAP31_RS06650 SM00849 Metallo-beta-lactamase superfamily CAP31_RS06670 SM00822 CAP31_RS06670 CAP31_RS06700 SM00834 Putative regulatory protein CAP31_RS06725 SM00382 ATPases associated with a variety of cellular activities CAP31_RS06735 SM00327 von Willebrand factor (vWF) type A domain CAP31_RS06765 SM00988 UreE urease accessory protein, N-terminal domain CAP31_RS06780 SM00938 Nitrogen regulatory protein P-II CAP31_RS06795 SM00028 Tetratricopeptide repeats CAP31_RS06800 SM00327 von Willebrand factor (vWF) type A domain CAP31_RS06805 SM00327 von Willebrand factor (vWF) type A domain CAP31_RS06885 SM00530 Helix-turn-helix XRE-family like proteins CAP31_RS06915 SM01230 CAP31_RS06915 CAP31_RS06955 SM00382 ATPases associated with a variety of cellular activities CAP31_RS06955 SM00962 SRP54-type protein, GTPase domain CAP31_RS06980 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CAP31_RS06980 SM00534 ATPase domain of DNA mismatch repair MUTS family CAP31_RS07060 SM00448 cheY-homologous receiver domain CAP31_RS07070 SM00968 SMC proteins Flexible Hinge Domain CAP31_RS07075 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAP31_RS07075 SM00450 Rhodanese Homology Domain CAP31_RS07080 SM00849 Metallo-beta-lactamase superfamily CAP31_RS07150 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CAP31_RS07225 SM00028 Tetratricopeptide repeats CAP31_RS07250 SM00881 CoA binding domain CAP31_RS07260 SM00267 diguanylate cyclase CAP31_RS07315 SM00091 PAS domain CAP31_RS07315 SM00387 Histidine kinase-like ATPases CAP31_RS07320 SM00421 helix_turn_helix, Lux Regulon CAP31_RS07320 SM00448 cheY-homologous receiver domain CAP31_RS07325 SM00267 diguanylate cyclase CAP31_RS07405 SM00382 ATPases associated with a variety of cellular activities CAP31_RS07435 SM00382 ATPases associated with a variety of cellular activities CAP31_RS07455 SM00226 Low molecular weight phosphatase family CAP31_RS07460 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAP31_RS07490 SM00487 DEAD-like helicases superfamily CAP31_RS07490 SM00491 CAP31_RS07490 CAP31_RS07495 SM00382 ATPases associated with a variety of cellular activities CAP31_RS07520 SM00481 DNA polymerase alpha chain like domain CAP31_RS07565 SM00938 Nitrogen regulatory protein P-II CAP31_RS07575 SM00881 CoA binding domain CAP31_RS07585 SM00387 Histidine kinase-like ATPases CAP31_RS07590 SM00028 Tetratricopeptide repeats CAP31_RS07590 SM00448 cheY-homologous receiver domain CAP31_RS07640 SM00382 ATPases associated with a variety of cellular activities CAP31_RS07645 SM00062 Bacterial periplasmic substrate-binding proteins CAP31_RS07790 SM00507 HNH nucleases CAP31_RS07805 SM00530 Helix-turn-helix XRE-family like proteins CAP31_RS07875 SM00487 DEAD-like helicases superfamily CAP31_RS07875 SM00490 helicase superfamily c-terminal domain CAP31_RS07875 SM00982 CAP31_RS07875 CAP31_RS07875 SM01058 CarD-like/TRCF domain CAP31_RS07890 SM00479 CAP31_RS07890 CAP31_RS07915 SM00919 Malic enzyme, NAD binding domain CAP31_RS07915 SM01274 CAP31_RS07915 CAP31_RS07950 SM00271 DnaJ molecular chaperone homology domain CAP31_RS08000 SM00825 Beta-ketoacyl synthase CAP31_RS08010 SM00822 CAP31_RS08010 CAP31_RS08015 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CAP31_RS08040 SM00878 Biotin carboxylase C-terminal domain CAP31_RS08055 SM00382 ATPases associated with a variety of cellular activities CAP31_RS08070 SM00849 Metallo-beta-lactamase superfamily CAP31_RS08075 SM00257 Lysin motif CAP31_RS08080 SM00382 ATPases associated with a variety of cellular activities CAP31_RS08120 SM00411 bacterial (prokaryotic) histone like domain CAP31_RS08125 SM00382 ATPases associated with a variety of cellular activities CAP31_RS08125 SM00464 Found in ATP-dependent protease La (LON) CAP31_RS08130 SM00382 ATPases associated with a variety of cellular activities CAP31_RS08130 SM00994 ClpX C4-type zinc finger CAP31_RS08130 SM01086 C-terminal, D2-small domain, of ClpB protein CAP31_RS08230 SM00382 ATPases associated with a variety of cellular activities CAP31_RS08290 SM00448 cheY-homologous receiver domain CAP31_RS08295 SM00448 cheY-homologous receiver domain CAP31_RS08305 SM00138 Methyltransferase, chemotaxis proteins CAP31_RS08310 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAP31_RS08310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAP31_RS08315 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAP31_RS08315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAP31_RS08320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAP31_RS08320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAP31_RS08325 SM00260 Two component signalling adaptor domain CAP31_RS08330 SM00073 Histidine Phosphotransfer domain CAP31_RS08330 SM00260 Two component signalling adaptor domain CAP31_RS08330 SM00387 Histidine kinase-like ATPases CAP31_RS08330 SM01231 CAP31_RS08330 CAP31_RS08335 SM00448 cheY-homologous receiver domain CAP31_RS08355 SM00047 Lysozyme subfamily 2 CAP31_RS08400 SM00858 CAP31_RS08400 CAP31_RS08415 SM00729 Elongator protein 3, MiaB family, Radical SAM CAP31_RS08435 SM00363 S4 RNA-binding domain CAP31_RS08505 SM00954 Region found in RelA / SpoT proteins CAP31_RS08510 SM00849 Metallo-beta-lactamase superfamily CAP31_RS08515 SM00487 DEAD-like helicases superfamily CAP31_RS08515 SM00490 helicase superfamily c-terminal domain CAP31_RS08555 SM00316 Ribosomal protein S1-like RNA-binding domain CAP31_RS08555 SM00357 Cold shock protein domain CAP31_RS08555 SM00955 CAP31_RS08555 CAP31_RS08560 SM00967 RNA 2'-O ribose methyltransferase substrate binding CAP31_RS08570 SM00978 CAP31_RS08570 CAP31_RS08665 SM00729 Elongator protein 3, MiaB family, Radical SAM CAP31_RS08715 SM00271 DnaJ molecular chaperone homology domain CAP31_RS08795 SM00490 helicase superfamily c-terminal domain CAP31_RS08835 SM00487 DEAD-like helicases superfamily CAP31_RS08840 SM00382 ATPases associated with a variety of cellular activities CAP31_RS08855 SM00382 ATPases associated with a variety of cellular activities CAP31_RS08865 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAP31_RS08945 SM00387 Histidine kinase-like ATPases CAP31_RS08945 SM00388 His Kinase A (phosphoacceptor) domain CAP31_RS08950 SM00382 ATPases associated with a variety of cellular activities CAP31_RS08950 SM00448 cheY-homologous receiver domain CAP31_RS08970 SM00422 helix_turn_helix, mercury resistance CAP31_RS09025 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAP31_RS09030 SM00226 Low molecular weight phosphatase family CAP31_RS09040 SM00382 ATPases associated with a variety of cellular activities CAP31_RS09050 SM00116 Domain in cystathionine beta-synthase and other proteins. CAP31_RS09100 SM00729 Elongator protein 3, MiaB family, Radical SAM CAP31_RS09110 SM00852 Probable molybdopterin binding domain CAP31_RS09150 SM00226 Low molecular weight phosphatase family CAP31_RS09220 SM00382 ATPases associated with a variety of cellular activities CAP31_RS09245 SM00849 Metallo-beta-lactamase superfamily CAP31_RS09250 SM00072 Guanylate kinase homologues. CAP31_RS09260 SM00382 ATPases associated with a variety of cellular activities CAP31_RS09265 SM00382 ATPases associated with a variety of cellular activities CAP31_RS09300 SM00382 ATPases associated with a variety of cellular activities CAP31_RS09310 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAP31_RS09310 SM00866 CAP31_RS09310 CAP31_RS09340 SM00028 Tetratricopeptide repeats CAP31_RS09370 SM00382 ATPases associated with a variety of cellular activities CAP31_RS09370 SM00448 cheY-homologous receiver domain CAP31_RS09380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAP31_RS09380 SM00387 Histidine kinase-like ATPases CAP31_RS09380 SM00388 His Kinase A (phosphoacceptor) domain CAP31_RS09390 SM00450 Rhodanese Homology Domain CAP31_RS09395 SM00831 Cation transporter/ATPase, N-terminus CAP31_RS09485 SM00382 ATPases associated with a variety of cellular activities CAP31_RS09485 SM01086 C-terminal, D2-small domain, of ClpB protein CAP31_RS09510 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAP31_RS09515 SM00052 Putative diguanylate phosphodiesterase CAP31_RS09515 SM00091 PAS domain CAP31_RS09515 SM00267 diguanylate cyclase CAP31_RS09545 SM00729 Elongator protein 3, MiaB family, Radical SAM CAP31_RS09575 SM00861 Transketolase, pyrimidine binding domain CAP31_RS09590 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CAP31_RS09590 SM00387 Histidine kinase-like ATPases CAP31_RS09595 SM00052 Putative diguanylate phosphodiesterase CAP31_RS09595 SM00091 PAS domain CAP31_RS09595 SM00267 diguanylate cyclase CAP31_RS09595 SM00448 cheY-homologous receiver domain CAP31_RS09600 SM00267 diguanylate cyclase CAP31_RS09680 SM00382 ATPases associated with a variety of cellular activities CAP31_RS09685 SM00419 helix_turn_helix, cAMP Regulatory protein CAP31_RS09710 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CAP31_RS09710 SM00091 PAS domain CAP31_RS09710 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAP31_RS09720 SM00382 ATPases associated with a variety of cellular activities CAP31_RS09735 SM00382 ATPases associated with a variety of cellular activities CAP31_RS09845 SM00347 helix_turn_helix multiple antibiotic resistance protein CAP31_RS09890 SM00382 ATPases associated with a variety of cellular activities CAP31_RS09910 SM00073 Histidine Phosphotransfer domain CAP31_RS09910 SM00387 Histidine kinase-like ATPases CAP31_RS09910 SM00388 His Kinase A (phosphoacceptor) domain CAP31_RS09910 SM00448 cheY-homologous receiver domain CAP31_RS09940 SM00830 Chorismate mutase type II CAP31_RS09950 SM00434 DNA Topoisomerase IV CAP31_RS09955 SM01060 CAP31_RS09955 CAP31_RS09980 SM00100 Cyclic nucleotide-monophosphate binding domain CAP31_RS09980 SM00419 helix_turn_helix, cAMP Regulatory protein CAP31_RS09995 SM00357 Cold shock protein domain CAP31_RS10020 SM00382 ATPases associated with a variety of cellular activities CAP31_RS10025 SM00052 Putative diguanylate phosphodiesterase CAP31_RS10030 SM00364 Leucine-rich repeats, bacterial type CAP31_RS10030 SM00369 Leucine-rich repeats, typical (most populated) subfamily CAP31_RS10040 SM00387 Histidine kinase-like ATPases CAP31_RS10045 SM00267 diguanylate cyclase CAP31_RS10045 SM00448 cheY-homologous receiver domain CAP31_RS10105 SM00341 Helicase and RNase D C-terminal CAP31_RS10105 SM00487 DEAD-like helicases superfamily CAP31_RS10105 SM00490 helicase superfamily c-terminal domain CAP31_RS10105 SM00956 CAP31_RS10105 CAP31_RS10175 SM00563 Phosphate acyltransferases CAP31_RS10190 SM00487 DEAD-like helicases superfamily CAP31_RS10190 SM00490 helicase superfamily c-terminal domain CAP31_RS10200 SM00562 CAP31_RS10200 CAP31_RS10210 SM00028 Tetratricopeptide repeats CAP31_RS10240 SM00564 beta-propeller repeat CAP31_RS10245 SM00382 ATPases associated with a variety of cellular activities CAP31_RS10265 SM01118 CAP31_RS10265 CAP31_RS10270 SM00855 Phosphoglycerate mutase family CAP31_RS10295 SM00642 Alpha-amylase domain CAP31_RS10325 SM00899 CAP31_RS10325 CAP31_RS10365 SM00052 Putative diguanylate phosphodiesterase CAP31_RS10365 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CAP31_RS10365 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CAP31_RS10365 SM00091 PAS domain CAP31_RS10365 SM00267 diguanylate cyclase CAP31_RS10445 SM00382 ATPases associated with a variety of cellular activities CAP31_RS10450 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CAP31_RS10470 SM00852 Probable molybdopterin binding domain CAP31_RS10480 SM00382 ATPases associated with a variety of cellular activities CAP31_RS10480 SM00487 DEAD-like helicases superfamily CAP31_RS10480 SM00490 helicase superfamily c-terminal domain CAP31_RS10480 SM00847 Helicase associated domain (HA2) Add an annotation CAP31_RS10510 SM00363 S4 RNA-binding domain CAP31_RS10525 SM00267 diguanylate cyclase CAP31_RS10530 SM01130 CAP31_RS10530 CAP31_RS10540 SM00849 Metallo-beta-lactamase superfamily CAP31_RS10625 SM01209 CAP31_RS10625 CAP31_RS10625 SM01210 CAP31_RS10625 CAP31_RS10630 SM00798 AICARFT/IMPCHase bienzyme CAP31_RS10630 SM00851 MGS-like domain CAP31_RS10720 SM01060 CAP31_RS10720 CAP31_RS10735 SM00841 Elongation factor P, C-terminal CAP31_RS10735 SM01185 CAP31_RS10735 CAP31_RS10740 SM00852 Probable molybdopterin binding domain CAP31_RS10775 SM00479 CAP31_RS10775 CAP31_RS10805 SM01329 CAP31_RS10805 CAP31_RS10810 SM00357 Cold shock protein domain CAP31_RS10820 SM00382 ATPases associated with a variety of cellular activities CAP31_RS10820 SM01086 C-terminal, D2-small domain, of ClpB protein CAP31_RS10845 SM00052 Putative diguanylate phosphodiesterase CAP31_RS10845 SM00267 diguanylate cyclase CAP31_RS10855 SM00897 FIST N domain CAP31_RS10855 SM01204 CAP31_RS10855 CAP31_RS10860 SM00891 ERCC4 domain CAP31_RS10895 SM00267 diguanylate cyclase CAP31_RS10905 SM00382 ATPases associated with a variety of cellular activities CAP31_RS10915 SM00267 diguanylate cyclase CAP31_RS10915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAP31_RS10930 SM00849 Metallo-beta-lactamase superfamily CAP31_RS10960 SM01322 CAP31_RS10960 CAP31_RS10980 SM00834 Putative regulatory protein CAP31_RS10995 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAP31_RS11010 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CAP31_RS11010 SM00245 tail specific protease CAP31_RS11025 SM00917 LeuA allosteric (dimerisation) domain CAP31_RS11055 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CAP31_RS11055 SM00474 3'-5' exonuclease CAP31_RS11055 SM00475 5'-3' exonuclease CAP31_RS11055 SM00482 DNA polymerase A domain CAP31_RS11085 SM00267 diguanylate cyclase CAP31_RS11105 SM00052 Putative diguanylate phosphodiesterase CAP31_RS11110 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CAP31_RS11110 SM00267 diguanylate cyclase CAP31_RS11110 SM00448 cheY-homologous receiver domain CAP31_RS11115 SM00448 cheY-homologous receiver domain CAP31_RS11120 SM00073 Histidine Phosphotransfer domain CAP31_RS11120 SM00260 Two component signalling adaptor domain CAP31_RS11120 SM00387 Histidine kinase-like ATPases CAP31_RS11120 SM00448 cheY-homologous receiver domain CAP31_RS11120 SM01231 CAP31_RS11120 CAP31_RS11125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAP31_RS11130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAP31_RS11130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAP31_RS11135 SM00260 Two component signalling adaptor domain CAP31_RS11140 SM00028 Tetratricopeptide repeats CAP31_RS11140 SM00138 Methyltransferase, chemotaxis proteins CAP31_RS11145 SM00260 Two component signalling adaptor domain CAP31_RS11155 SM00267 diguanylate cyclase CAP31_RS11160 SM00450 Rhodanese Homology Domain CAP31_RS11220 SM00900 CAP31_RS11220 CAP31_RS11255 SM00448 cheY-homologous receiver domain CAP31_RS11260 SM00448 cheY-homologous receiver domain CAP31_RS11260 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAP31_RS11265 SM00387 Histidine kinase-like ATPases CAP31_RS11265 SM00388 His Kinase A (phosphoacceptor) domain CAP31_RS11270 SM00448 cheY-homologous receiver domain CAP31_RS11275 SM00387 Histidine kinase-like ATPases CAP31_RS11275 SM00388 His Kinase A (phosphoacceptor) domain CAP31_RS11295 SM00054 EF-hand, calcium binding motif CAP31_RS11315 SM00267 diguanylate cyclase CAP31_RS11330 SM00382 ATPases associated with a variety of cellular activities CAP31_RS11345 SM00530 Helix-turn-helix XRE-family like proteins CAP31_RS11365 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CAP31_RS11370 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CAP31_RS11415 SM00347 helix_turn_helix multiple antibiotic resistance protein CAP31_RS11485 SM00327 von Willebrand factor (vWF) type A domain CAP31_RS11490 SM00028 Tetratricopeptide repeats CAP31_RS11490 SM00327 von Willebrand factor (vWF) type A domain CAP31_RS11540 SM00382 ATPases associated with a variety of cellular activities CAP31_RS11540 SM00962 SRP54-type protein, GTPase domain CAP31_RS11540 SM00963 SRP54-type protein, helical bundle domain CAP31_RS11585 SM00382 ATPases associated with a variety of cellular activities CAP31_RS11585 SM00448 cheY-homologous receiver domain CAP31_RS11590 SM00387 Histidine kinase-like ATPases CAP31_RS11590 SM00388 His Kinase A (phosphoacceptor) domain CAP31_RS11615 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CAP31_RS11685 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAP31_RS11695 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CAP31_RS11695 SM00292 breast cancer carboxy-terminal domain CAP31_RS11695 SM00532 Ligase N family CAP31_RS11700 SM00771 ZipA, C-terminal domain (FtsZ-binding) CAP31_RS11710 SM01192 CAP31_RS11710 CAP31_RS11710 SM01193 CAP31_RS11710 CAP31_RS11815 SM00382 ATPases associated with a variety of cellular activities CAP31_RS11830 SM00382 ATPases associated with a variety of cellular activities CAP31_RS11885 SM00646 CAP31_RS11885 CAP31_RS11890 SM00853 MutL C terminal dimerisation domain CAP31_RS11890 SM01340 CAP31_RS11890 CAP31_RS11905 SM00487 DEAD-like helicases superfamily CAP31_RS11905 SM00490 helicase superfamily c-terminal domain CAP31_RS11985 SM00052 Putative diguanylate phosphodiesterase CAP31_RS11985 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CAP31_RS11985 SM00267 diguanylate cyclase CAP31_RS12025 SM00487 DEAD-like helicases superfamily CAP31_RS12025 SM00490 helicase superfamily c-terminal domain CAP31_RS12035 SM00662 RNA polymerases D CAP31_RS12040 SM00363 S4 RNA-binding domain CAP31_RS12040 SM01390 CAP31_RS12040 CAP31_RS12060 SM00316 Ribosomal protein S1-like RNA-binding domain CAP31_RS12110 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CAP31_RS12115 SM01374 CAP31_RS12115 CAP31_RS12135 SM00322 K homology RNA-binding domain CAP31_RS12150 SM01382 CAP31_RS12150 CAP31_RS12150 SM01383 CAP31_RS12150 CAP31_RS12170 SM01403 CAP31_RS12170 CAP31_RS12180 SM00838 Elongation factor G C-terminus CAP31_RS12180 SM00889 Elongation factor G, domain IV CAP31_RS12195 SM00663 RNA polymerase I subunit A N-terminus CAP31_RS12220 SM00649 Ribosomal protein L11/L12 CAP31_RS12225 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CAP31_RS12225 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CAP31_RS12275 SM01400 CAP31_RS12275 CAP31_RS12295 SM00028 Tetratricopeptide repeats CAP31_RS12305 SM00563 Phosphate acyltransferases CAP31_RS12340 SM00448 cheY-homologous receiver domain CAP31_RS12345 SM00091 PAS domain CAP31_RS12345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAP31_RS12345 SM00387 Histidine kinase-like ATPases CAP31_RS12345 SM00388 His Kinase A (phosphoacceptor) domain CAP31_RS12390 SM00845 GatB domain CAP31_RS12435 SM00936 Penicillin-binding protein 5, C-terminal domain CAP31_RS12450 SM00729 Elongator protein 3, MiaB family, Radical SAM CAP31_RS12525 SM00382 ATPases associated with a variety of cellular activities CAP31_RS12570 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CAP31_RS12570 SM00091 PAS domain CAP31_RS12570 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAP31_RS12570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAP31_RS12575 SM00052 Putative diguanylate phosphodiesterase CAP31_RS12575 SM00091 PAS domain CAP31_RS12575 SM00267 diguanylate cyclase CAP31_RS12615 SM00342 helix_turn_helix, arabinose operon control protein CAP31_RS12640 SM01101 CAP31_RS12640 CAP31_RS12680 SM00487 DEAD-like helicases superfamily CAP31_RS12680 SM00490 helicase superfamily c-terminal domain CAP31_RS12695 SM00382 ATPases associated with a variety of cellular activities CAP31_RS12715 SM00563 Phosphate acyltransferases CAP31_RS12730 SM00448 cheY-homologous receiver domain CAP31_RS12730 SM01012 CAP31_RS12730 CAP31_RS12775 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CAP31_RS12830 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CAP31_RS12955 SM00849 Metallo-beta-lactamase superfamily CAP31_RS12995 SM00883 Chaperonin 10 Kd subunit CAP31_RS13005 SM00116 Domain in cystathionine beta-synthase and other proteins. CAP31_RS13005 SM00924 MgtE intracellular N domain CAP31_RS13015 SM00382 ATPases associated with a variety of cellular activities CAP31_RS13145 SM00382 ATPases associated with a variety of cellular activities CAP31_RS13145 SM01086 C-terminal, D2-small domain, of ClpB protein CAP31_RS13205 SM00833 Cobalamin synthesis protein cobW C-terminal domain CAP31_RS13225 SM00464 Found in ATP-dependent protease La (LON) CAP31_RS13270 SM00382 ATPases associated with a variety of cellular activities CAP31_RS13290 SM00116 Domain in cystathionine beta-synthase and other proteins. CAP31_RS13315 SM00831 Cation transporter/ATPase, N-terminus CAP31_RS13360 SM00028 Tetratricopeptide repeats CAP31_RS13365 SM00965 Secretin and TonB N terminus short domain CAP31_RS13370 SM00382 ATPases associated with a variety of cellular activities CAP31_RS13370 SM00448 cheY-homologous receiver domain CAP31_RS13410 SM00382 ATPases associated with a variety of cellular activities CAP31_RS13410 SM00962 SRP54-type protein, GTPase domain CAP31_RS13410 SM00963 SRP54-type protein, helical bundle domain CAP31_RS13415 SM00382 ATPases associated with a variety of cellular activities CAP31_RS13495 SM00487 DEAD-like helicases superfamily CAP31_RS13495 SM00490 helicase superfamily c-terminal domain CAP31_RS13505 SM00936 Penicillin-binding protein 5, C-terminal domain CAP31_RS13515 SM00831 Cation transporter/ATPase, N-terminus CAP31_RS13520 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAP31_RS13520 SM00954 Region found in RelA / SpoT proteins CAP31_RS13525 SM01409 CAP31_RS13525 CAP31_RS13530 SM00072 Guanylate kinase homologues. CAP31_RS13555 SM00331 Sigma factor PP2C-like phosphatases CAP31_RS13555 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CAP31_RS13570 SM00729 Elongator protein 3, MiaB family, Radical SAM CAP31_RS13605 SM00363 S4 RNA-binding domain CAP31_RS13625 SM00859 Semialdehyde dehydrogenase, NAD binding domain CAP31_RS13680 SM00100 Cyclic nucleotide-monophosphate binding domain CAP31_RS13725 SM00382 ATPases associated with a variety of cellular activities CAP31_RS13745 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CAP31_RS13745 SM01232 CAP31_RS13745 CAP31_RS13770 SM00732 Likely ribonuclease with RNase H fold. CAP31_RS13780 SM00450 Rhodanese Homology Domain CAP31_RS13785 SM01018 B12 binding domain CAP31_RS13795 SM00382 ATPases associated with a variety of cellular activities CAP31_RS13800 SM01005 Alanine racemase, C-terminal domain CAP31_RS13830 SM00938 Nitrogen regulatory protein P-II CAP31_RS13845 SM00382 ATPases associated with a variety of cellular activities CAP31_RS13930 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CAP31_RS13950 SM00977 TilS substrate C-terminal domain CAP31_RS13965 SM00955 CAP31_RS13965 CAP31_RS13980 SM00052 Putative diguanylate phosphodiesterase CAP31_RS13980 SM00267 diguanylate cyclase CAP31_RS14010 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAP31_RS14030 SM00382 ATPases associated with a variety of cellular activities CAP31_RS14180 SM00855 Phosphoglycerate mutase family CAP31_RS14245 SM00052 Putative diguanylate phosphodiesterase CAP31_RS14245 SM00091 PAS domain CAP31_RS14245 SM00267 diguanylate cyclase CAP31_RS14270 SM00729 Elongator protein 3, MiaB family, Radical SAM CAP31_RS14370 SM00878 Biotin carboxylase C-terminal domain CAP31_RS14395 SM00382 ATPases associated with a variety of cellular activities CAP31_RS14435 SM00470 ParB-like nuclease domain CAP31_RS14440 SM00267 diguanylate cyclase CAP31_RS14455 SM01228 CAP31_RS14455 CAP31_RS14470 SM01234 CAP31_RS14470 CAP31_RS14485 SM00857 Resolvase, N terminal domain CAP31_RS14490 SM00422 helix_turn_helix, mercury resistance CAP31_RS14515 SM00422 helix_turn_helix, mercury resistance CAP31_RS14525 SM00052 Putative diguanylate phosphodiesterase CAP31_RS14530 SM00857 Resolvase, N terminal domain CAP31_RS14550 SM00857 Resolvase, N terminal domain CAP31_RS14555 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAP31_RS14560 SM00226 Low molecular weight phosphatase family CAP31_RS14570 SM00382 ATPases associated with a variety of cellular activities CAP31_RS14580 SM00116 Domain in cystathionine beta-synthase and other proteins.