CAP31_RS14495 NONE
        merP NONE
CAP31_RS14505 NONE
CAP31_RS00010 NONE
CAP31_RS14510 NONE
        merD NONE
CAP31_RS14520 NONE
        gyrB NONE
CAP31_RS14525 NONE
CAP31_RS00020    6824 ..    6834 +  -2.4  -3.57144   GGCATACGCCTTGAT                 GCCG TCG CGGA                 TTTCCGGGTCAGCCA  48 255
CAP31_RS14555   10371 ..   10394 +  -3.2  -3.42338   CAGCAGTTCGATCAA          TTCG-CGTG CGGTTAC CACGTCGAA          TATTTCCCATTCCTT  48 4
CAP31_RS14560 NONE
CAP31_RS14565   11264 ..   11276 +  -6.2  -2.88544   ATCGGCGGGCAAGGT                GGCG GCTAG CGCC                TCTATCAGGCTGCCC  54 10
CAP31_RS00060 NONE
        arsA NONE
CAP31_RS00065 NONE
CAP31_RS14575 NONE
CAP31_RS14580 NONE
CAP31_RS00075 NONE
CAP31_RS14585   15335 ..   15348 +  -3.7  -3.74747   GAGGAACAGAAAATG               CCGGC CGGT GCGGG                TTTCCTGCACCTTGG  55 37
CAP31_RS14590   18767 ..   18785 +  -6.6  -3.26471   CGCCAGCACCTCCGG             CGCGAGCG CTG TGGTCGCG             TTGCTATCAACATAG  57 336
CAP31_RS14600   19749 ..   19759 +  -8.2   -2.6175   GCCCGTAATTGAAAT                 CGGG CGG CCCG                 CTTAATTCGACTATG  61 51
CAP31_RS14605 NONE
CAP31_RS14610 NONE
CAP31_RS14615   20949 ..   20984 +  -2.5   -3.5393   TATGCACCGCCGGAT   GCT-CCGGAGCGCGGGC ATAA GCCTGCG-TCAGATAGC    TTTCGGCGACCTCAT  47 11
CAP31_RS14620   22402 ..   22412 +  -8.2  -3.01712   TCTCGGTGGTGAATT                 CCGC ACT GCGG                 TCTTCGCCCAGCAGA  63 290
CAP31_RS14625   24346 ..   24357 +  -7.2  -5.75342   CCGATCAGCGACGAT                GGCG ATGT CGCC                 TTTTTTTTCGCCAGG 100 330
CAP31_RS00165   26440 ..   26457 +  -6.2  -3.81516   AGCAGGGCTTTATCA             CTGGGG AACGCG CCCCGG              TTCTTGGTGATTTTG  61 215
CAP31_RS00185   30395 ..   30412 +  -2.6  -4.84359   GCGGCTACCCCACGC             TCCGGG ACTACG CTCGGG              TTTTTGTACCGATCC  69 95
CAP31_RS00190 NONE
CAP31_RS00195 NONE
CAP31_RS14670 NONE
CAP31_RS00200 NONE
        iscA NONE
CAP31_RS14675 NONE
        hscA NONE
         fdx NONE
CAP31_RS14680 NONE
CAP31_RS14685 NONE
CAP31_RS14690 NONE
CAP31_RS00220 NONE
CAP31_RS14695 NONE
        nifV NONE
CAP31_RS14700 NONE
CAP31_RS14705 NONE
        cysE NONE
CAP31_RS00235 NONE
CAP31_RS00240 NONE
CAP31_RS00245 NONE
CAP31_RS00250 NONE
CAP31_RS00255 NONE
CAP31_RS00260 NONE
CAP31_RS00265   44795 ..   44806 +  -7.2  -3.36273   GTGCATTTCCGCATC                GGCG ACGC CGCC                 TTGCTGTTGCAGCCA  61 520
CAP31_RS00280 NONE
CAP31_RS00285   47709 ..   47737 +   -14  -4.39287   CTGCCAAAGCGGCAC        TGGAAGCCTGAA CGCCA TTCGGGCTTCCA        TTTTCATCTCATTCC 100 44
CAP31_RS00310   53091 ..   53101 +  -2.4  -2.61831   TGGCAGCAGAAATAA                 AGGC ATA GCCC                 GGTTTTTGCAGTAGA  39 26
CAP31_RS00315 NONE
        mtgA NONE
CAP31_RS00325   54785 ..   54804 + -10.8   -5.4833   CCACCAAATAAACCA            GGCTTTCA GCGA TGAAAGCC             TTTTTTATTGCCTGC 100 35
CAP31_RS00340   55794 ..   55809 + -10.4  -6.04324   TTGAGACAGCGAAAA              GGCAGC CATG GCTGCC               TTTTTTATTTTTTGG 100 54
CAP31_RS00345 NONE
CAP31_RS00350   57488 ..   57513 +  -5.5  -2.85216   CGCTATATCCTGTAC         CGCCGGCTAA AGCATGG TTAG-CGGCG         TCATTCTGGCTGGTG  50 5
CAP31_RS00355 NONE
CAP31_RS00360   60438 ..   60453 +  -3.2  -2.57132   CGTCCCAAACAAGCG              GCCG ATTGACTG CGGC               GTTATGCCGCACGGC  40 17
CAP31_RS00365   61538 ..   61548 +  -5.4  -3.63627   GCTCCAGCGGGGCTT                 CAGA TTT TCTG                 TTTACGGTCTACCAG  58 83
CAP31_RS00380 NONE
CAP31_RS00385 NONE
CAP31_RS00390 NONE
CAP31_RS00395   71405 ..   71441 +   -16  -2.72152   CCGCCGATCGAAGCC   TGA-TCCGGGAAGCGGC AACA GCCGCTTCCCGGAATGA    TGACTTTATGCTGCC  90 23
CAP31_RS00400 NONE
        trxA   72311 ..   72338 +   -20  -3.89215   AACAGCGCGCAAAAA        TGGCCGTACAGC TAAC GCTGTACGGCCA         TTTGCATTTATCGGC 100 41
CAP31_RS00435 NONE
CAP31_RS00440   78762 ..   78778 +  -2.9  -3.04537   ACAGTAGGTATGTAC              TGTGCGA AAC TAGCGCA              TCTATCTGCTATCAT  43 34
CAP31_RS00445   79190 ..   79215 +  -7.5  -5.67063   TTGCGCTAATCAACC         CCAGGCCGACA GCGA TGTCGGCCTAA          TTTTTTTATGGTCCG 100 46
CAP31_RS00450 NONE
CAP31_RS00455 NONE
CAP31_RS00460 NONE
CAP31_RS00465 NONE
CAP31_RS00470 NONE
CAP31_RS00475   84182 ..   84193 +  -5.8  -2.90763   CTTGGTCGGCCTGTT                TGGC GCTG GCCA                 TGTATAACCTATAAC  50 7
CAP31_RS00480 NONE
CAP31_RS00485 NONE
CAP31_RS00490   87006 ..   87024 +  -2.4  -2.74605   GGCACGGCAGCAAGC             TCAGGC AGGTAGC GCTTGA             TGAATTTTCCGGCGC  39 221
CAP31_RS00515 NONE
CAP31_RS00520   92599 ..   92609 +  -5.4  -3.73775   TCATCACTCAAAACC                 TCAG CAA CTGA                 TTTGATGGAAGTAAA  59 325
        msrA NONE
CAP31_RS00545 NONE
CAP31_RS00550   96295 ..   96310 +  -7.5  -4.34402   CAGCGGCCCTGATAT              GCGGC AATATC GCCGC               TTTTACTATGGAGAG  76 46
CAP31_RS00555   96613 ..   96629 +  -6.5  -3.87815   ATAAAATATCGGTTG              CGGGCTA AAC TAGCCGG              TTTATCCCGCTCCCA  66 66
CAP31_RS00560 NONE
CAP31_RS00565 NONE
CAP31_RS00570 NONE
CAP31_RS00575  100078 ..  100093 +  -6.8  -2.78679   AAAAGCCCTGATGTG              GGCGGA AGAA TTCGCC               ATTTAACTCAAAAAA  56 69
CAP31_RS00580  102600 ..  102620 +  -2.5  -3.07816   ACTCGATAGGAGTAG            GGCGG CGACCTGGCAC CCGCC            TTGCATCAATACGGA  42 306
CAP31_RS00590 NONE
        metW NONE
CAP31_RS00600 NONE
CAP31_RS00605 NONE
CAP31_RS00610 NONE
CAP31_RS00615  108053 ..  108064 +    -3   -4.1043   CTGCCGTGAGCGGAT                TGAT TATC ATCA                 TTTGTGCTGTTTCCG  58 97
CAP31_RS00635 NONE
        dprA NONE
CAP31_RS00645 NONE
        topA  115705 ..  115732 + -11.2  -3.00298   TTTCAATGCCCAAGC        CGGCCAGTGCGC GTAT GCGTTCTGGTCG         TGTGTGCTTGCGCAC  75 91
CAP31_RS00655  116560 ..  116576 +  -3.7  -5.18726   TATTTTGAGCTCGCA              TACATGA CCT TCATGTC              TTTTTATTATGGGCA  77 346
CAP31_RS00660  119455 ..  119469 +  -2.9  -3.17146   CGCATTATTCTTTGC               TTTAC CCATT GTAAA               TCTGTTGTCAAGCAG  45 68
CAP31_RS00665 NONE
CAP31_RS00670 NONE
CAP31_RS00675 NONE
CAP31_RS00680 NONE
CAP31_RS00685  127242 ..  127254 +  -6.3  -3.23393   AAACTGCCAAATCTC                CTTGA AAT TCAAG                TCTTATGAGCTACCA  57 142
CAP31_RS00690 NONE
CAP31_RS00695  128206 ..  128235 + -16.6  -3.78018   GCAATAGCTGTAAAA       GCAAAACCCGGA AATAAA TCCGGGTTTTGC        TTTACGTAATTTTTG 100 34
CAP31_RS00720  131284 ..  131295 +  -7.2  -3.29829   TACAGTTGCCGGTAG                CGCC AGGG GGCG                 TTGTGCAGGGCTGTG  59 236
        nifH  135211 ..  135267 +  -9.5  -3.55444   GCGGCAGTACCGGGA GATCTCTGTAAATGGCTGCAGGCTT GTAGCCA AAGTCGGGAGCCATTTGCAGAGCGC TTTCGGAAGTACGGA  75 91
        nifD NONE
        nifK  138458 ..  138475 + -12.7  -3.13164   TAGCGAGCCCTTAAG             CAGCGGG CGGC CCCGCTG              TTCACTGATTGAACG  81 58
CAP31_RS00755 NONE
CAP31_RS00760 NONE
CAP31_RS00765 NONE
CAP31_RS00770  142020 ..  142035 +  -2.5  -3.47226   GTGGTCATTACCGAA              CCTGT CGCTGA ACGGG               TTCATTGATTCATCT  45 2
        nifX NONE
CAP31_RS00780 NONE
CAP31_RS00785 NONE
        fdxB NONE
CAP31_RS00795 NONE
CAP31_RS00800  144808 ..  144820 +  -3.3  -2.90065   GTAAATGCAGCAGAC                AGCCA TGG TGGCA                TCGTCTTTATGAGGT  44 107
CAP31_RS00805  145666 ..  145684 +  -4.4  -3.61517   GGCCTCTCATATTAT             TCTGGCAG TCA CCGCCTGA             TTCTTAGGAAAAAGT  53 7
        modA  146566 ..  146586 +  -2.5  -4.60746   TACTGAATAATTATT            TACAACTCG GGC CGAGTAATA            TTTTCGTGTTTTTCG  63 123
        modB NONE
        modC  148400 ..  148428 + -14.5  -3.37796   AAGGATAGCCCGCTT        CAGGCGCTGGGCG AGT CACCCAGCGCGTG        TTGTGCGTCCTGCAA  93 39
CAP31_RS00840  151216 ..  151246 +  -2.5  -3.69332   ATGTGATTGGAGCCG       CATGCTGAATGTG CCGAA CACGATCAGTCTG       TTTCGCCTGTTATTG  50 101
CAP31_RS00845  152207 ..  152217 +  -6.8  -2.64561   CCCTGTTCGCATCAG                 GGCA ACT TGCC                 GTCTGTTTGTTAGCG  55 461
CAP31_RS00855  153270 ..  153294 +  -7.2  -3.33348   TATGCGGCGGCCAGA          TCGATGCC ATAGAGTTC GGCATCGA          TGTTCTGATATTGCA  59 508
CAP31_RS00865  155860 ..  155874 + -11.4  -3.03124   ACGCGCAGCGGGTCA               CGGCTG TTC CAGCCG               TCTTCGGCCATGCGC  70 433
CAP31_RS00885  158371 ..  158403 +    -5  -3.12327   TGCTGCGTAAAAATG      CTAAAATGCAAGGT GTTAA ATTCTGCATTTTAG      TGTTCGCTGTACGGC  52 73
CAP31_RS00890 NONE
CAP31_RS00895 NONE
CAP31_RS00900 NONE
CAP31_RS00905  161996 ..  162053 + -20.9  -2.64695   GCACCCGTCTGACCG TTTGTCGTACCCAATAAAAAAGGCAGC CGAA GCTGCCTTTTTTATTGGGTGGGACCGG ATTACTTGATAATCG 100 29
CAP31_RS00945  171385 ..  171398 +  -5.3  -4.00038   GGTATACACTGTAAA               CTTTC CCGG GAAAG                TTTCTAATAATAATG  61 55
CAP31_RS00950 NONE
CAP31_RS00955 NONE
CAP31_RS00960 NONE
CAP31_RS00965 NONE
CAP31_RS00970  178220 ..  178231 +  -4.4  -3.25192   TAGGCGACAAAGGAT                CTGA ACAG TCAG                 TCTTCTACACTTAGG  49 0
CAP31_RS00975  179355 ..  179371 +  -9.3  -3.91911   GTAATGCCCCATTTT              GCGCCCG GGT CGCGCGC              TTTGCTTGCCGTAAA  73 107
        argB  181944 ..  181973 + -16.7  -3.32844   GTCTTCGGCGGACAA       TAAAAAACCCGCT AAGC AGCGGGTTTTTTA        TTGTCCGGTCAACAG 100 49
CAP31_RS01010 NONE
CAP31_RS01015  184884 ..  184906 +  -6.3  -4.59773   GGTTTCGGCAGCACC           GGACGTTAA ACGTC TTATCGTCC           TTTTTGCGCATAAAC  78 17
CAP31_RS01035 NONE
CAP31_RS01040 NONE
CAP31_RS01045  193576 ..  193591 +    -9  -3.57263   GCGTTTCTGATGATG              TCTGCG TAGC CGCAGA               TTTCGCGCTGCGGCT  72 31
CAP31_RS01050  194641 ..  194651 +    -4  -3.14211   CTGCCAGTAACTGCT                 TATC GGG GATA                 TTAGTGAAACAGAAT  49 11
CAP31_RS01055 NONE
CAP31_RS01060  197155 ..  197165 +  -8.2  -2.73483   ATGCACAACGGTTTC                 GCCG TGG CGGC                 TGGTTACCGTCCACT  57 167
CAP31_RS01070 NONE
CAP31_RS01075 NONE
CAP31_RS01080  199178 ..  199188 +    -4  -3.48063   TCATTTCAATTCGGC                 TGTT AAT AACA                 TTATGCATTTACATA  53 55
         mpl NONE
CAP31_RS01090  201762 ..  201793 + -14.4  -4.43351   TTGTCAGCTTATTGG      CGGGGCTGGCTGGC GTGA GTCAGTCGGCTCCG       TTGTTTTTCAGGTCT 100 44
CAP31_RS01115  206874 ..  206900 +  -2.2  -3.23572   CTGCTGCAACGATAA         CCGGTTATCA TGCTGTT TGACATCCGG         TGTTATACAATCGCT  43 26
CAP31_RS01120  208054 ..  208074 +  -7.6  -3.75153   GCGTTCACGGGGCGA            CAGGGTGT TGAAC ACATCCTG            TTTCAGTTCGCCGCG  67 228
CAP31_RS01155 NONE
CAP31_RS01160  216467 ..  216479 +  -5.5  -3.42861   CGGTGCGGCGGTCGC                CAGCG CCT CGTTG                TTCATCTTCTGAATT  56 1
CAP31_RS01165  217527 ..  217551 +    -5  -3.53012   GCACGGTTTCCCCTT         GCCCTACCG CTTACGCA CGG-AGGGC          TTTAACCAGAAGGAG  56 136
CAP31_RS01170 NONE
        priB NONE
        rpsR NONE
CAP31_RS01185  219166 ..  219177 +  -5.8  -3.18511   AGTCGCGGCCAGATG                CTGG AAAT CCAG                 TTGGGTGTATATCTG  52 193
CAP31_RS01215  224950 ..  224976 +    -5  -3.08679   TCGGACACGAGTCGA         TGCCGATCGCGG CAG CTGCGGTCATCA         TGTTGGCTGCGGCGA  50 286
CAP31_RS01225 NONE
        metF  228421 ..  228457 +  -5.7  -2.73483   GTGGGCAATGCGCGG    CCACATCATGCCGGGGG TGT CGACCAGCGTCATGTGG    TCGTTCAGATCAAGT  49 436
CAP31_RS01240 NONE
CAP31_RS01245 NONE
CAP31_RS01250 NONE
CAP31_RS01255  233058 ..  233094 +  -2.6  -5.10968   GTAACATATAAAAAC   CA-TTATTTTACTTTTG TCGA TAAAAGTAATATAAATG    TTTTTGTGTGTTACT  75 158
CAP31_RS01260 NONE
CAP31_RS01265 NONE
CAP31_RS01270  239516 ..  239550 +  -5.1    -4.371   TGGTTACACCCACAA    GCGGCGGTAAAATAGCA CTT TGCTGTT--ACCTCCGC    TTTTACTATGCTGCG  67 58
CAP31_RS01275  241418 ..  241428 +  -8.2  -3.35798   TGGCGATGGAATTGT                 GCCG GTG CGGC                 TTCTGCATCACGCCT  62 287
CAP31_RS01295  245144 ..  245179 +  -2.3  -3.85296   TTCACATTACCTTGC    CGTACCGGGCCGCAC CATGAT GAACGGGCCGCTGCG     TATTTTCATTGTCGA  53 6
CAP31_RS01300  245990 ..  246001 +  -2.2  -3.35185   TCCGATATGAATCAA                CAGT GCTG GCTG                 ATTGTTTTTATATAT  45 103
CAP31_RS01305  249377 ..  249389 +  -3.3  -3.07816   CCGGCACCGCCTCAA                CGACC TCA GGTGG                TTCGCTGGGTCAGGC  45 316
CAP31_RS01315  250539 ..  250566 +  -9.8  -4.24342   CGTCTGTGTCTCATC        AGCGCTGGCC AGGGTAGC GGCCAGCGCA         TTTATTGCTAGCGCC  87 53
CAP31_RS01365  259711 ..  259728 +  -2.7  -4.42062   TTATGGCTTGTTATA             CAAATTG TTAA CAATCTG              TTTGTTTGCAAGCTA  62 48
CAP31_RS01370 NONE
CAP31_RS01375 NONE
CAP31_RS01380 NONE
CAP31_RS01385  262239 ..  262275 +  -9.4  -2.62184   GATCGCTCCCGGCTC    CTTGCGGCCTGTGGCG GGTGA TGCTGTGGGCTGCAAG    TAATATGCAAAACCG  64 39
CAP31_RS01410 NONE
CAP31_RS01415 NONE
CAP31_RS01420 NONE
CAP31_RS01425  268707 ..  268734 +  -9.8  -3.21924   CATCGCCTTGATGTT        G-GCCAGTCGGGC ATT GCCCTGCTGGCGC        TGTTCTGCCGGGTCG  68 69
CAP31_RS01435  271728 ..  271743 +  -6.1  -3.53444   CCGTGCTTACGGCCA              CCTGG AACAGG CCAGG               TTTGAACGGCAATAA  61 230
CAP31_RS01465  276532 ..  276543 +  -5.8  -2.75803   GGCGCCTAGAGCTAT                TGCC TTAT GGCA                 TAATTGACGTCTTGT  49 32
CAP31_RS01470 NONE
CAP31_RS01475 NONE
       rfaE2 NONE
CAP31_RS01485 NONE
CAP31_RS01490  280348 ..  280361 +  -2.3  -3.06915   TGCAGTAAGCATGTC               GCAAG ATTT CCTGC                TTGAATCGAGTGCCT  42 417
CAP31_RS01545  291923 ..  291933 +  -2.6  -2.50077   TTGCCTAGGCACCTA                 TATT GTA AATA                 GTCATTTTATACAGC  40 33
CAP31_RS01550 NONE
CAP31_RS01555 NONE
CAP31_RS01560 NONE
        emrB NONE
CAP31_RS01570 NONE
        fghA  298888 ..  298923 +  -9.6  -3.61001   AGTTTATGTCGTTGT    GGAGAAACGCTCACGG TATA CCTTGGGCGTTACCCC     TATCTTTTTCTGAAA  75 55
CAP31_RS01590 NONE
CAP31_RS01595 NONE
CAP31_RS01600 NONE
CAP31_RS01605  302274 ..  302286 +  -3.3  -3.06492   GGGCCTCATGCACTC                TGGCG CAA CTCCA                TGTTAGGATAGCTCA  45 71
        corA  303716 ..  303739 +    -6  -4.13561   CTCTGGCTCGCGAGG          CGGACGTGCAG TTA TTGCACG-CTG          TATTTTTTAAGAAAA  66 357
CAP31_RS01615  304475 ..  304490 +  -7.6  -3.53012   CAAACAGGACGCCAT              CCTGTT GTAT AACAGG               TTTAAACAAGGAAGA  66 113
CAP31_RS01620 NONE
CAP31_RS01625 NONE
CAP31_RS01630  310412 ..  310423 +  -2.2  -3.84719   TTGGCAGAGTAGTGT                TCGC ATGA GTGA                 TTTCGCTTTGCGCCT  53 46
        mutY  311525 ..  311538 +  -3.8   -2.9796   CTTGTAACAGCACTC               GCGT CAACAC ACGC                TATACTTCTGCGTTA  45 88
CAP31_RS01640  312263 ..  312277 +  -3.4  -2.96722   CATCAGCCGGTTCGC               ACCGCG GTC TGCGGC               ATTTCTGAATATCCC  45 72
CAP31_RS01645 NONE
CAP31_RS01650  313788 ..  313822 +    -5  -4.07568   GCTCGTCGCCCTTTT    TGCCGGTGGCGGCCT TGTTGC AGGCAGTCATCG-CA     TTTTGCGGGGCAGGG  64 136
CAP31_RS01660  314917 ..  314936 +  -3.6  -4.70659   TCGTCAGGGCTGACC            TTGATGTT GGCA AGCATCAG             TTTTTCCATCTGCGC  72 203
CAP31_RS01675 NONE
CAP31_RS01680  321010 ..  321024 +  -7.1  -3.31162   ACGCGTAACCGATAC               CGACC TTGAC GGTCG               TGTATTTGGTCGTGC  61 136
CAP31_RS01695 NONE
        bioB NONE
        bioF NONE
        bioH NONE
        bioC  326946 ..  326958 +  -3.3  -4.00042   ACGGAACAAGGGCTG                CTGTG AGT CGCGG                TTATTTCGTCACCGG  56 20
        bioD  327646 ..  327662 +  -3.7  -3.09516   AGCTGACCAACACGC              CGACT CGTCTGA AGTCG              TTCCCTGATCAAGCC  45 43
CAP31_RS01725  330984 ..  330997 +  -3.8  -3.82605   ACGGTAGCGCTTAAT               CTGC ATTGAA GCAG                TTCTGTTGGTTTCTT  54 17
CAP31_RS01735  332562 ..  332580 + -11.7  -3.34013   TTGAAGCCGGATTAA             CCGCTGG GGACG CCAGCGG             TTAATTCAACAAGTG  82 37
CAP31_RS01750  336010 ..  336031 +  -9.3  -2.68942   TTTCACCGCGCCAGC           GCCGCGCCC GTCC GGGTCCGGC            ATTATATGCAGCGGT  59 249
CAP31_RS01765  340322 ..  340352 +  -7.4  -2.72839   AAGCGCATACTTGTT       GGCGCTGGCTTCAG GTA CGCAGGGCAGCGCC       TGGTTAAGGCTGATT  54 314
CAP31_RS01810 NONE
CAP31_RS01815  351160 ..  351170 +  -6.8  -3.38218   ATCGTTAAACGCTAA                 GTCG TCT CGAC                 TTGTGGGCTATTTAA  61 26
CAP31_RS01820  352122 ..  352135 +  -4.5  -3.19175   GTAAATTTGTATCAT               G-GCGC TCA GCGCAC               TTAAATATATTAGAA  49 8
CAP31_RS01825 NONE
CAP31_RS01830  352843 ..  352855 +  -2.6  -3.54424   TATAGTGTCGCGGAA                CGCG ATGGA TGCG                TTTGGCAACATGCAA  49 48
CAP31_RS01835  353434 ..  353454 + -10.4  -3.61398   TTATTAGGTAGTGAA            GCCGGGGA CAAAA TTCCCGGC            TTGTTGCCGCAACGG  79 59
CAP31_RS01840 NONE
CAP31_RS01845 NONE
CAP31_RS01850 NONE
CAP31_RS01855  357643 ..  357658 +    -4  -3.66908   AGCTTACTAGTGACG              GCAAGA ATTA TTTTGC               TTGGTTTTGAAGGAA  56 51
CAP31_RS01860 NONE
CAP31_RS01865 NONE
CAP31_RS01870 NONE
CAP31_RS01875  360315 ..  360343 +  -6.8  -2.57501   ATTCTTGCGGATTCC        GTTTGCAACAGT TAATT GTTGTTGCAAGC        ATATGTTTAGTGAAA  55 63
CAP31_RS01880  360836 ..  360863 +   -20  -4.38712   TCGTTTGAAATGATG        CAACAGGGGCGA TTTA TCGCCCCTGTTG         TTTTCTAAAAATGCA 100 46
CAP31_RS01885 NONE
CAP31_RS01890 NONE
CAP31_RS01895 NONE
CAP31_RS01900  365407 ..  365461 + -10.2  -2.73994   AGCTGGAAAAATCTC CGGTCAAGATGGCTGAATACAAAC GTAACCA GGCTGTATTCAGTCATTTTGGCTG TAGTGTTGCAGAAAT  71 40
CAP31_RS01905  366908 ..  366926 + -11.7  -5.69473   GCGCGTAGCTAAAAA             CCGAGGG TTAAC CCCTCGG             TTTTTTTATGATGTG 100 68
CAP31_RS01910  368442 ..  368459 + -12.7  -5.61596   TGTTTGCTATTTAAA             CCGAGGG CTAG CCCTCGG              TTTTTTTATGAGCGT 100 65
CAP31_RS01915 NONE
CAP31_RS01920  370604 ..  370614 +  -5.4  -4.10007   ACCGTTTAAGCGCGT                 GTCA TGC TGAC                 TTTTCAAGAGATTAT  66 85
        glyQ NONE
CAP31_RS01930  373585 ..  373628 + -14.9   -4.7497   CTGGTCCATGAAAAA CACGAAGGCACGAAAAGTAT ATTGC AT-CTTTTCGTACCTTCGTG TTTTTGGTGGATGGC 100 56
CAP31_RS01970 NONE
CAP31_RS01975 NONE
CAP31_RS01980 NONE
CAP31_RS01985 NONE
CAP31_RS01990 NONE
CAP31_RS01995 NONE
CAP31_RS02000 NONE
CAP31_RS02005 NONE
CAP31_RS02010 NONE
CAP31_RS02015 NONE
CAP31_RS02020 NONE
CAP31_RS02025  397179 ..  397209 +  -3.8  -3.23019   GACGATCAGGTCATC       GACACGGGAAGACA GCA TGACATGCCGGGTC       ATTTTGGGTTTGTAA  48 296
CAP31_RS02040  400153 ..  400176 +  -5.8  -2.51312   TCAACGTTGGACATA          AGGTGCGCGC TTTA GCGCGTCCCG           CTTGATGGATGGGTT  49 65
CAP31_RS02045  400541 ..  400562 +  -6.5   -4.9448   AGGCTCAACGTTTAA           TAGACACCG ATTT CGGTGCCTG            TTTTATTTAGTAAAT  83 26
CAP31_RS02080 NONE
CAP31_RS02085 NONE
        rnpB NONE
CAP31_RS02095  408319 ..  408329 +  -3.2  -4.15565   TGCGTTATCTCTAGC                 GCAG ACC TTGC                 TTTTGCACTGATGCA  56 27
CAP31_RS02100  409831 ..  409844 +  -3.1   -2.5937   ATCGTGCACCAGACG               CAG-GG AGG CCACTG               ATTATGGCGATGTCT  41 11
CAP31_RS02105 NONE
CAP31_RS02110 NONE
CAP31_RS02115  412190 ..  412210 + -16.1  -4.85782   GTAGCTTCACACTAA            CGGCGGGGT AAT GCCCCGCCG            TTTCTTTTTGGCAAG 100 53
CAP31_RS02120 NONE
CAP31_RS02125 NONE
CAP31_RS02130 NONE
        ftsL  414155 ..  414167 +  -6.2  -3.02144   AAAGCGCCTGAGGTG                CGGC CGTGA GCCG                TATTGCAGCACGTCC  55 17
CAP31_RS02140 NONE
CAP31_RS02145 NONE
CAP31_RS02150 NONE
CAP31_RS02155 NONE
CAP31_RS02160 NONE
        ftsW NONE
        murG NONE
CAP31_RS02175 NONE
CAP31_RS02180 NONE
CAP31_RS02185 NONE
CAP31_RS02190 NONE
        ftsA NONE
CAP31_RS02200  429854 ..  429890 +  -4.7  -2.52676   GGGAGTTTTTGGGTT   TTAATTGATTCAG-GC TATAAT GCGCTGAATTAATTGA    TCCATTACGCACATG  47 54
CAP31_RS02205 NONE
CAP31_RS02210  431365 ..  431380 +  -5.4  -3.91911   ATGGTGTGCCAGACT              TTCTGC AGCC GCAGGA               TTTCATTGACATGCG  62 375
CAP31_RS02220  434309 ..  434346 +  -6.4  -5.36689   GCAATTTACTGTAAA   CACCGATGTGATTGGTC AGCCA GATCAAGCA-GTCGGTG   TTTTGTTTTTCCTTT  89 59
CAP31_RS02225  435631 ..  435646 +    -6  -3.36991   GGCCTTGGCGATGTC              GTCCGG ATCG CCGGCC               TGTTTGAGGATGGTG  54 134
CAP31_RS02235 NONE
CAP31_RS02240  438713 ..  438732 + -11.4   -3.4052   CGTTTGCTGACATTG            GTGGCCAG TCAT CTGGCCGC             TTAGTTGACTTCGGC  79 2
CAP31_RS02260  443144 ..  443171 + -12.8  -5.64274   GGAATTGTATGCTTC        CGCAGTTGTCAT GGAA GTGGCAACTGCG         TTTTTTTGTGCCTGC 100 51
CAP31_RS02265  444102 ..  444132 + -21.3  -3.91911   GGTCTTTTTTCCAAA       CGACAATGCCCGC GAAAA GCGGGCATTGTCG       TTTGCTTCGCCTGGA 100 44
        thiD NONE
CAP31_RS02305 NONE
        hemL  456643 ..  456681 + -30.6  -3.70811   GGCGGAGGTGGGAAA   CAGAAAGGGCGGACTGGT TAA ACCAGTCCGCCCTTTCTG   TTTGAGATTATCTGC 100 47
CAP31_RS02330  461435 ..  461453 +  -3.2  -3.42124   AAGAAAGTTCAATAT             TTTTTGAG TGG CTGAAAAA             TTATGAGTAATTTTA  47 154
CAP31_RS02335  462947 ..  462957 +  -8.2  -3.27704   CGGCAATGCCCAGTT                 GGCG CGC CGCC                 TTGCGTTTGGCCAGT  65 503
CAP31_RS02350 NONE
CAP31_RS02355 NONE
CAP31_RS02360 NONE
CAP31_RS02365 NONE
CAP31_RS02370  470637 ..  470673 + -21.2  -3.05715   ATAAATTTTTTGCAG    CAAATAAAAAGGCGGG TAATC CCCGCCTTTTTATTTG    TTAAGTACAGGGCTT 100 37
CAP31_RS02375  471527 ..  471546 + -10.6  -2.71791   TTTTCACGGGTGTTG            CCGCGCCG GAAT CGGCACGG             ATTTCCCCGACGGCT  64 311
CAP31_RS02395 NONE
CAP31_RS02400  478216 ..  478232 +  -5.8  -3.72695   CCAGTCGCGGTAGAA              TGCCTG CATGC CGGGCA              TTTCATGGCGGCAAT  61 285
CAP31_RS02410 NONE
CAP31_RS02415  480087 ..  480110 +  -4.7  -3.14344   GCAGCGCCGCAAATT          CAATTTCAA ACGATA TTGAGATTG           TTGATCCCGGACATG  52 53
CAP31_RS02430 NONE
CAP31_RS02435 NONE
CAP31_RS02440  484387 ..  484416 +  -5.7  -2.72344   GCCTGGGCGCGGCAC       TTGCTGTGATTCG TCAC CGAAGCGCAGGAA        TACTTCCGACTGCAG  49 17
CAP31_RS02445  486440 ..  486469 + -12.2  -3.14564   TATCCCGAACCATCC       TGCTGGTTGCAG CCATGA CTGCAACCGGCG        TTACTGCGGCCATGG  81 68
CAP31_RS02450  488505 ..  488516 +  -7.2  -5.15969   CATGCGGGTATTGTC                GCGC GACA GCGC                 TTTTTTGAATTCCAG  88 427
CAP31_RS02485 NONE
CAP31_RS02490 NONE
        xerD  496445 ..  496465 +  -7.6  -3.32343   AATCCCGCAGGAATG            GCCCATTT GCGCG AGATGGGC            TTGTCGCCGTGTAGA  64 383
CAP31_RS02510 NONE
CAP31_RS02515  498307 ..  498327 + -11.2  -4.90266   AGGTCCAAAAGAAAA            GGGAAAGC TTGGT GCTTTCCC            TTTTTAGTTACTGGG 100 70
CAP31_RS02520 NONE
CAP31_RS02525  498595 ..  498609 +   -10  -5.72622   GCCGCAAGATGTTTA               TGGGCT TAT AGCCCA               TTTTTTGTTTGTGGA 100 83
CAP31_RS02530 NONE
        nusA  500536 ..  500549 +  -9.5   -2.9462   CTACACTGATTATGG               CGGCG CGTG CGCCG                TGGTTTGCCTAAATA  70 0
CAP31_RS02540  503374 ..  503385 +  -2.2  -3.40403   TACGAAGTCGTGCAG                GTTG CACG CAGC                 TTATAATGGCCAAGG  45 8
CAP31_RS02545 NONE
CAP31_RS02550  504669 ..  504680 +  -3.6  -4.07568   CCGCGGCGTTTAATG                CGGT TTAA GCCG                 TTTTGAGGAGCAGGC  59 8
CAP31_RS02555  505539 ..  505563 +  -7.1  -3.02263   CCAGTGTAATGGTCG          AGCTGGCTG ATTCTTC CAGCCAGCG          TATTGCCGCCAGTGT  53 329
CAP31_RS02565  507132 ..  507156 +  -2.8  -5.54192   AAAAAACTAATTAAA         CCCGC-TATCT GTAA GGATTTGCGGG          TTTTTTTACATTCAT  82 83
CAP31_RS02570  508751 ..  508788 + -13.6  -2.82082   GGTCTTTGTTCTTGG   TGGTCGGCATTTCTTG GGGGTA TAAGATATGCCGACCA    TGCTTGCTGCTTGGT  84 247
CAP31_RS02605  515123 ..  515133 +  -4.6  -3.60971   CGTTGCGCTCCGCGT                 GCGG CTT CTGC                 TTTCGCCATTGACAT  53 249
CAP31_RS02635 NONE
CAP31_RS02640 NONE
CAP31_RS02645  520087 ..  520134 +  -5.6  -3.29459   TTGTAGTAGTCGCGA TCTGATCTGACAGTT-CCCCGGT TTG ACAGATGCAGCTGTCAGTTCAGA TTCAGTTGTTCAATG  54 143
CAP31_RS02680 NONE
CAP31_RS02685 NONE
CAP31_RS02690 NONE
CAP31_RS02695 NONE
CAP31_RS02700  529286 ..  529304 +  -2.4  -3.24747   CGTATTTTGCGTGAC             CATGTTTG CGA TAGGCATG             TTGCTCATGTGGCAA  43 325
CAP31_RS02705  530306 ..  530320 +  -5.6  -3.63515   TATGCGCGGGGTGAT               CAGCGC GTA GCCCTG               TTGTTGCCAATAGGA  56 97
        pgsA NONE
        trkD NONE
CAP31_RS02725  534282 ..  534302 +  -2.5  -4.56597   CTGGTTGAACCCTTC           GCC-TGCC ATGAAC GGCGCGGC            TTTTTCGCAGCGCAC  65 284
CAP31_RS02740  539667 ..  539698 + -16.6  -4.04206   GACGGAATTCTTGCA      GAAGCGGGCGCGGT GCGA ACCTTGCCCGCTTC       TTTGTATAAGCCTCA 100 88
CAP31_RS02745  540874 ..  540895 + -11.5  -4.27117   GTATTGCCTTGATAA           CCGGCAGGC TGAG GCGTGCCGG            TTTGTGTTGTCAGAA  91 43
        carB NONE
CAP31_RS02755 NONE
CAP31_RS02760  545255 ..  545274 +  -2.8  -2.72661   AGATCCGTGCAAATG            CGGTCTAGC ATG GCTAT-CCG            TGCTTCACGATCATC  41 127
CAP31_RS02770  546161 ..  546173 +  -4.8  -3.40867   AAAATATTCGTATAT                GCTC AGGTG GAGC                TTGATTAATGAATAA  54 77
CAP31_RS02775  548098 ..  548115 + -14.1  -5.23292   CAATCGTGTGCATGA             GCCGGGG GAAA CCCCGGC              TTTTCTTTTGTGTAG 100 44
        folP NONE
CAP31_RS02785  550397 ..  550422 +  -6.2  -5.28942   ACTGCTTAATAAAAA         CGCGATGT CCGGCAAGAA ACATCGCG          TTTTTATTTGGAGTC  89 88
CAP31_RS02810 NONE
CAP31_RS02815  555581 ..  555595 +  -6.4  -2.64616   TGTGTTACCGTGGGG               CGGATT ATC GATCCG               TCCTGTCAATCGGCC  53 47
CAP31_RS02820  555683 ..  555717 +  -2.9  -3.31188   GAGTTCGAGTCTCGC    CGTCG-GCACCATTAGA TTT TCGAATAG-GCACGACG    TTGCTGCTTATCGTA  47 15
CAP31_RS02825 NONE
CAP31_RS02830  556655 ..  556674 +  -3.5  -3.27298   CAAAACAAGATCAAG            CGCACAA ATACTA TTGCGCG             TTAATGATTAAAAGC  47 2
CAP31_RS02835 NONE
CAP31_RS02840 NONE
CAP31_RS02845 NONE
CAP31_RS02850 NONE
CAP31_RS02855 NONE
CAP31_RS02860 NONE
CAP31_RS02865 NONE
CAP31_RS02870 NONE
CAP31_RS02875 NONE
CAP31_RS02880 NONE
CAP31_RS02885 NONE
CAP31_RS02890 NONE
CAP31_RS02895  570515 ..  570539 +  -2.1  -4.89477   TCAGTATCAGGGAAA          TACGGTCGG CATAGCA CTTACCGTA          TTTTCTTCTTCAGGC  67 50
        msrA NONE
CAP31_RS02925 NONE
        leuC NONE
        leuD NONE
        leuB NONE
         asd NONE
CAP31_RS02950  580298 ..  580312 +  -4.2  -3.05463   TCATAATTACATGAA               ATGCCT AAC AGGCAA               TTGAATCAGAGGGGT  47 45
CAP31_RS02955  583116 ..  583141 + -17.7  -5.34555   GTCCTATCTGTCATC         CAGCCACAGCA GTAA TGCTGTGGCTG          TTTTTTATGGTGTGG 100 68
CAP31_RS02960 NONE
CAP31_RS02965 NONE
CAP31_RS02970 NONE
        trpB NONE
CAP31_RS02980  587165 ..  587179 +  -4.2  -4.09685   GTGACGGCTTAAGTC               AGGTAC AAC GTACCG               TTTTCAAGAATGAAG  61 29
CAP31_RS02985 NONE
CAP31_RS02990 NONE
CAP31_RS02995  590162 ..  590181 +  -8.6  -2.88849   GGCGCACAAATAGAG            CGAAATCG TGAC CGGTTTCG             ATTTCGTGGTGTCAG  62 28
CAP31_RS03000 NONE
CAP31_RS03005  592295 ..  592323 +  -8.1   -5.4505   GCTAAAGCGGCATAA        CCCGTTTTGGCTG GCA TGGTCGAAGCGGG        TTTTTTATTAGGAGC 100 133
CAP31_RS03010  593552 ..  593567 +    -9  -2.88544   GATTGGCCGGGTTGT              GCGCAT CGAT ATGCGC               TGTATCGGCATGGGC  65 55
CAP31_RS03015  594375 ..  594393 +  -2.4   -4.5394   CGCGTCGTCGTTGAC             GTCCAT GATCTCG GTGGAC             TTTTCCTGTTTATCT  65 205
CAP31_RS03040 NONE
CAP31_RS03045  599785 ..  599795 +  -2.4  -3.59698   CTGCTGCCCGGCCTG                 GCCC ATT GAGC                 TTATGTCTGAACTGA  47 17
CAP31_RS03050  600950 ..  601005 +   -13  -4.22748   ATGGTACGGTGCAAA GCGTTGCA-CGTACCG-GTGTAT-AACG CGAG CGTTGATGCACACGGT-CGATGCAACGC TTTGGTTTATTCATA  95 407
CAP31_RS03060  602007 ..  602037 + -12.7  -3.43117   ACCCCTAACCTTTCA      GTCCACGGGACTGCC TTC GGCAG-CCCGTG-AC      TTCTACGTTAGGTAT  85 53
CAP31_RS03065 NONE
CAP31_RS03070 NONE
CAP31_RS03075 NONE
CAP31_RS03080  604697 ..  604723 +  -8.6  -3.56092   CTCTACAAAGCCCAG         CCCGGCCAGTTC TTC GATCTGGCTGCG         TTTCACGCCTAGTGC  69 478
CAP31_RS03095  606980 ..  606990 +  -2.6  -4.28018   TGAGCGAAGTCATGT                 TTTA TAT TAAA                 TTTTAATAAAATATT  60 38
        rbcL NONE
CAP31_RS03105 NONE
CAP31_RS03110 NONE
CAP31_RS03115 NONE
CAP31_RS03120 NONE
CAP31_RS03125 NONE
CAP31_RS03130 NONE
CAP31_RS03135 NONE
CAP31_RS03140 NONE
CAP31_RS03145 NONE
CAP31_RS03150  615346 ..  615363 +  -6.9  -3.74693   ACATGCACGCGCTGG             CGTCAGC ACTA GCGGACG              TTTGATCGCGTCGGC  66 3
CAP31_RS03155 NONE
CAP31_RS03160  616374 ..  616391 +  -4.8  -2.87468   CGGCAGTAGTAGCGT             GGCGTC CGGCGT GATGCC              TGTCCTGTGCTACCC  49 117
CAP31_RS03165 NONE
CAP31_RS03170 NONE
CAP31_RS03175 NONE
CAP31_RS03180  621966 ..  621976 +  -6.8  -3.34013   CTGCGCCGTAAACCA                 GACG TAA CGTC                 TTGATTCCGGAAGTG  61 85
CAP31_RS03185 NONE
CAP31_RS03190 NONE
CAP31_RS03195  623475 ..  623487 +  -9.1  -2.74192   GTGATGGAGTTCGCC                GCGCA TTT TGCGC                TCGTCTTCGCCGATA  60 166
CAP31_RS03210  626469 ..  626486 +  -5.5  -4.41895   GGAAAATGGCGCTAT             CTGCTGG ACAG CGAGCAG              TTTTGATTAACAATT  72 2
CAP31_RS03215  627425 ..  627438 +  -3.7   -3.6761   GTCAAAAGCCGGGGA               GCCTG ACTG CCGGC                TGTTTCTTCGCCGAC  54 85
CAP31_RS03220 NONE
CAP31_RS03225 NONE
CAP31_RS03230  629684 ..  629725 + -23.3  -3.81488   AAATAATCGCTGAGA CACCTGCATCATTCGGTTC GTTT GAGCTGAATGATGCAGGTG  TTGTGTTTGAAAAGC 100 35
CAP31_RS03240  631118 ..  631152 +  -3.7  -5.84381   AAGCATTCCTGAAAG    GCCCGTAAAACC CAATAAATACAA GGTTT-ACGGGC     TTTTTTTATTCCTAA 100 63
CAP31_RS03245 NONE
CAP31_RS03250  633003 ..  633039 + -21.9  -4.57073   GATTTGGTTATTGGT    TCAGGGGTCTTGTTTAT GGC GTAAACAAGACCCCTGA    TTTTTGGAGCAGATA 100 209
CAP31_RS03255 NONE
CAP31_RS03260 NONE
CAP31_RS03265  634541 ..  634568 +  -5.5  -4.70353   GGCGAATAACTAACG        CGGCTTGGGTG AATGTA TGCCTGAGCCG         TTTTAATTTATTATC  74 304
CAP31_RS03275 NONE
CAP31_RS03280 NONE
CAP31_RS03285  639010 ..  639028 +    -6  -5.68438   TAAACAACAAAAAAA             GACACC GGTATGA GGTGTC             TTTTTTGTTTCATGC  89 50
CAP31_RS03290 NONE
CAP31_RS03295  640208 ..  640238 + -14.9  -4.52589   ATAATTTGTATTGTC       TGAAAAAGCGCGG CTAGT CCGCGCTTTTTTA       TTTTCTATCGGAGAA 100 150
CAP31_RS03300  642168 ..  642191 + -13.2  -4.06527   CAGCGCAAACCAAGC          GAGGGGTGAG TTTA CTCACTCCTC           TTGTATTTTGATTTT  95 17
CAP31_RS03305  642771 ..  642793 +  -3.4   -3.3452   AGTCGGCTGCAAACG           CGCCTGAT GCAGCAA GTCAGGTG           TTATGAGGTGATGTC  49 57
CAP31_RS03310 NONE
CAP31_RS03315  643451 ..  643481 + -19.2  -3.91911   TAAATCAGCGGGAAG       CGAAAAAGGAGGCC GCT GGCCTCCTTTTTTG       TTTGCTTGGCATAAG 100 38
CAP31_RS03320 NONE
CAP31_RS03325  646944 ..  646955 +  -3.6  -3.17212   ACAACAAAAATTTAA                CGCG CAAT TGCG                 TTCCTGAGGTAGTGA  47 7
CAP31_RS03330 NONE
CAP31_RS03335  647631 ..  647650 +  -2.1  -2.88337   CTTAAAATATAGCTT            TTGTGCT TTGGCT GGCGCAA             TGCTTCTGCTATAAT  40 29
CAP31_RS03340 NONE
CAP31_RS03345 NONE
CAP31_RS03350 NONE
CAP31_RS03355 NONE
CAP31_RS03360 NONE
CAP31_RS03365  652251 ..  652261 +  -2.6  -3.17051   CAATCGGGCTCGAGT                 TTTA GGA TAAA                 TATTCGTGATGACGA  45 508
CAP31_RS03375 NONE
CAP31_RS03380 NONE
CAP31_RS03385 NONE
CAP31_RS03390  656955 ..  656983 +   -14  -4.87803   GGTTTTAGTTCTCGA       CAGGCATCCCGCA GCAA TG-GGGATGCCTG        TTTTATTTGCGCCTC 100 48
         gnd NONE
CAP31_RS03400  659839 ..  659849 +  -2.4  -4.81249   TTCCCGCAATCAACG                 CGCC GTT GCCG                 TTTTTCAGTTTGAAA  69 292
        petA NONE
CAP31_RS03415 NONE
CAP31_RS03420  663499 ..  663522 + -13.8  -3.69506   TAGTGTGATTTTTTA          CGGCCGACGG GTAC CCGTCGGCCA           TGTTATTTTAGGGTA 100 67
CAP31_RS03425 NONE
CAP31_RS03430 NONE
CAP31_RS03435  664743 ..  664766 + -13.2  -4.92239   ACCAAAAATACAGAA          GGGGTTAGCT TAAC GGCTAACCCC           TTTTTGCATTTTTAA 100 37
CAP31_RS03440  665647 ..  665657 +  -6.8  -2.71268   AGCGGGAAGCGTACC                 GGCA GTT TGCC                 TGATGTGTAGTAGCG  50 408
CAP31_RS03505  680239 ..  680261 +  -3.5  -5.92337   CTGGAAGTAAAAAGA          CCTTATGGCT GAAA AGC-GTAAGG           TTTTTTTTCGTCTGT 100 68
CAP31_RS03515  681465 ..  681482 + -14.1  -3.02233   GAATCAGCAGGCAAA             GGGCGGC GCAA GCCGCCC              TCGTGTTTTTAACCT  85 49
CAP31_RS03520 NONE
        argF NONE
CAP31_RS03530 NONE
CAP31_RS03535 NONE
CAP31_RS03540 NONE
CAP31_RS03545 NONE
CAP31_RS03550 NONE
CAP31_RS03555  687935 ..  687954 +  -8.6  -3.27489   ATGGGCAGTCAGTAC            CGCAC-AGC CCG GCTCGTGCG            TGTGTTTGCAATTGC  62 181
CAP31_RS03675  712379 ..  712392 +  -6.7  -3.15257   ACAATATGAAAAGTT               TCAGC TTCA GCTGA                TGTATATATTTCAGG  54 226
CAP31_RS03685 NONE
CAP31_RS03690 NONE
CAP31_RS03695  714556 ..  714575 +  -2.9  -3.53224   CCCTTGTGCTAAATG            GTTTTGT GTGGAA ACAAGAC             TTTAGCACGGGGATG  49 145
CAP31_RS03700  716760 ..  716774 +  -4.2  -4.82901   CGGCTTTGAGGCAAA               CGGG GAACAAA CCCG               TTTTTATAACAGCAG  73 54
CAP31_RS03705 NONE
CAP31_RS03710 NONE
CAP31_RS03715 NONE
CAP31_RS03720 NONE
CAP31_RS03725 NONE
CAP31_RS03730  719880 ..  719895 +  -2.6  -2.54896   ACCATGATGAAGAGG              CAGCCAT CGA AT-GCTG              TGGATTCGATCCGGA  40 179
CAP31_RS03735 NONE
CAP31_RS03740  720866 ..  720909 +    -8  -3.54424   ACGCCGTAGCCTAAA CCCTCGCTTCCAGCCCGTTA AACA TAGCGGGCTGCTGGAGAAGG TTTAACGAAATAGCA  66 27
CAP31_RS03745 NONE
CAP31_RS03750 NONE
CAP31_RS03755 NONE
CAP31_RS03760  722593 ..  722603 +  -2.4  -4.42386   GGCTGAAAATAGCCA                 GCAG GAA CAGC                 TTTTCTGAATAAGGA  61 7
CAP31_RS03765 NONE
CAP31_RS03770 NONE
CAP31_RS03775  724315 ..  724332 + -11.3  -3.95435   ATTATTAACCCTCAA             TGGACGC AAAT GCGTCCA              TTCTCTTTTGCGGAA  87 63
CAP31_RS03780 NONE
CAP31_RS03785 NONE
CAP31_RS03790 NONE
CAP31_RS03795 NONE
CAP31_RS03800 NONE
CAP31_RS03805 NONE
CAP31_RS03810 NONE
CAP31_RS03815 NONE
CAP31_RS03820  730910 ..  730935 +  -2.6  -4.47873   TCCGTTAAATATAGT         TCAGTTTGTG AAATTG TGCAAACTGG          TTTTCTGACTGTTAT  62 99
CAP31_RS03825  731422 ..  731448 +  -2.9  -2.71712   CGGAGCGTAGCGGAG        TCCGCCTTGACC ACAG GGTTG-GGCGGC         ATTTACAGGAGAACG  41 186
CAP31_RS03830 NONE
CAP31_RS03835  732406 ..  732420 +  -3.4  -4.56597   TTCACGCGCATGTAT               CGCGCC GAG GATGCG               TTTTTGGGGAGGAAA  67 132
CAP31_RS03840 NONE
CAP31_RS03845  734049 ..  734059 +  -6.8  -4.55295   GGGCTAACCGCCTTC                 TGGG CTA CCCA                 TTTATTTATCAAGGA  77 34
CAP31_RS03850 NONE
CAP31_RS03855 NONE
CAP31_RS03860 NONE
CAP31_RS03865 NONE
CAP31_RS03870 NONE
CAP31_RS03875  738036 ..  738046 +  -3.2  -3.89354   TGCATGTGTTTGCTG                 GTCG GAT TGAC                 TTGTTGCTTTAGGCG  54 3
CAP31_RS03880 NONE
CAP31_RS03885  738879 ..  738910 +    -5  -2.77994   AGTGCTCGATATGAG      CGAGGCCGAGGTTG AATC CCACCTCAGTGTCG       TGCTTCAGCTTTCTG  49 96
CAP31_RS03890  740837 ..  740847 +  -4.6  -2.67735   GGCTAACGCACGTCA                 GGCG AGC CGTC                 ATTAATGTTTAAATG  45 10
CAP31_RS03895  741091 ..  741106 +  -3.2  -2.88544   CCGCCTTAACCAGCC              TCACGC GCGC GCGTAA               TCTGTGCGCATGGCC  42 60
CAP31_RS03900 NONE
CAP31_RS03905 NONE
CAP31_RS03910 NONE
CAP31_RS03915 NONE
CAP31_RS03920  745479 ..  745512 +  -6.6  -3.31792   CGAGATTGCTGTTAA     GGGCGTCGTGACTC TGACAT GAATCACGCCGACC      TTCTAAAGCTGCTGC  59 4
CAP31_RS03925 NONE
CAP31_RS03930 NONE
CAP31_RS03935 NONE
CAP31_RS03940 NONE
CAP31_RS03945 NONE
CAP31_RS03950 NONE
CAP31_RS03955  749676 ..  749695 + -12.2  -4.35042   GATGGAAATAAAAAA            GGCTTGCA TCGC TGCAAGCC             TTGTTTTCTGGTGGG  95 164
CAP31_RS03995 NONE
CAP31_RS04000  756930 ..  756963 +  -9.1  -3.06815   GCCTCTGTCATTTTT     GCTTCATAATA-GCCA TCC TGGCGTATTATGAAGG     TCTCTTCAGGAGACT  67 47
CAP31_RS04005  760636 ..  760667 +   -10  -4.64598   GGTCAGCAGTTTCTT      CGGCAGGCGGGTTG CTTT CAGCTCGCGCGCCG       TTTTTCAAATCGTTA  93 119
CAP31_RS04010  762205 ..  762223 +  -2.4  -4.28361   GTCGGCGGACAGCGG             CTTGTC CCAGGCC GACAGG             TTTTCCTCCAGTTGC  60 112
CAP31_RS04025  765155 ..  765168 +  -5.2  -3.44146   GAAAAAACCTATCAC               GGCG AAAATA CGCC                TTCCTTGTGAACCGG  54 2
CAP31_RS04030  767166 ..  767178 +  -6.2  -3.88787   TTAATCCGGATTCTG                CCGC CAGCA GCGG                TTTGTGCCACTGTCG  64 265
CAP31_RS04050  769491 ..  769509 +  -4.4  -4.74103   GGACAATAAGCGCCG             GGCGTGCA GCT TACTCGCC             TTTTTCCCTTGCGGC  73 32
CAP31_RS04090 NONE
CAP31_RS04095  778114 ..  778149 +  -3.9  -5.18561   AGCACGGTGATCAGC    GCTTGC-GCTTTTGGC ATGAG GCCGGTTGCAGCAAGC    TTTTTTGCGTCTTTC  83 315
CAP31_RS04115 NONE
CAP31_RS04120 NONE
CAP31_RS04125  780806 ..  780818 +  -4.1  -3.54543   CCATTTCAGCATATA                TACCA GAG TGGTG                TTTAGAGAGATAACT  52 487
CAP31_RS04150 NONE
CAP31_RS04155 NONE
CAP31_RS04160 NONE
CAP31_RS04165 NONE
        ribB NONE
CAP31_RS04175 NONE
CAP31_RS04180 NONE
        thiL NONE
CAP31_RS04190 NONE
CAP31_RS04195  791282 ..  791301 +  -3.6  -2.78463   TAGACCTTTTCCCGA            TTGCTGAGC AGA GTTC-GCAA            TATCGTGCAAAGGCT  44 60
        recA NONE
CAP31_RS04205  792865 ..  792894 + -10.1  -3.54029   ATTGTTGATCGACAA       GCAGCCGTCTA CGGATTAA TAGATGGCTGC        TTATGGTTGCTGACG  75 33
        gshA NONE
CAP31_RS04230 NONE
CAP31_RS04235 NONE
CAP31_RS04240 NONE
CAP31_RS04245 NONE
        ptsP  800636 ..  800647 +  -5.8  -3.66646   CGAGCTTGGCTTCGG                CCAG CTCC CTGG                 TTTCAGTACAGTGTT  58 183
CAP31_RS04260 NONE
        merP NONE
        merA  803441 ..  803453 +  -6.2  -3.17075   CATTTTGTAGTCGTC                GGCG GCGAG CGCC                TTACCTTCCAGCGGA  52 204
CAP31_RS04305  812116 ..  812128 +  -6.3  -4.22375   CGATTGAACCCGCTT                TTCAG GCG CTGAA                TTTCTTCCATCATAT  69 105
CAP31_RS04335 NONE
CAP31_RS04340  819584 ..  819604 + -11.9  -5.45652   GTTCCAAATAAAAAA            GCGCAATCG ATT TGATTGCGC            TTTTTTATTGCGAGT 100 61
CAP31_RS04355  825516 ..  825527 +    -3  -3.56092   ATGATAGTTATAGTT                TGAT TAAA ATCA                 TTTAGAGCATCCTGA  50 414
CAP31_RS04370 NONE
CAP31_RS04375  829558 ..  829588 + -10.4  -3.05384   CAGTTCGGGAAAATA       TACGGTTGCGCCGA TTT TCTGCACAGCCGTA       TTCAATGCGGCGCGC  68 204
        phoB NONE
CAP31_RS04390  832949 ..  832960 +  -5.8  -3.42841   CCGGCAGAATGCATC                CTGC CACA GCAG                 TTCTCCTCCGGTTGT  56 411
CAP31_RS04415 NONE
CAP31_RS04420  836463 ..  836478 +  -5.4  -2.74514   AGTCGGCTGATTTTG              CGTGCT GTTC AGTACG               TAATTAAAGATTTCC  49 31
CAP31_RS04425 NONE
CAP31_RS04430  840246 ..  840285 +  -7.2  -2.92389   CCATTTGCAGGCTAG  CAAGACAGGCCTGAAACTG GTA TAGTTTCGGGCCT-TCGGG  TCTGTAGCTCAGTTG  56 44
CAP31_RS04435  840370 ..  840396 + -13.7  -5.09762   CACCAGTAAAATTAA         CGGCCAAGAGC TCAAT GCCCTTGGCCG         TTTTTCTATTGCGGT 100 36
CAP31_RS04445 NONE
CAP31_RS04450  845340 ..  845376 +  -6.6  -4.19506   CTGGGCGGCTTCATA   GAGCGCGGCGTCGGCCAG TTG CTGGTCGA-GCT-CGGTC   TTTTCGGCTTGCCAT  71 412
CAP31_RS04540  865525 ..  865536 +  -5.8  -3.46116   GCTGAAGATTGTAGC                GCGT GCGA ACGC                 TTGCTATTATCTATT  56 68
CAP31_RS04545 NONE
CAP31_RS04550  867464 ..  867481 +  -2.7  -2.63633   GCAGAGTGTGGTGAT             TGCATTGC TCC GCA-TGCG             CTTGCTGTGTTATAA  41 27
        rpsB  868383 ..  868396 +  -9.5  -5.68039   AATGCTTAACGAAAA               GGGGC TTTC GCCCC                TTTTTTTGTAAATTT 100 48
         tsf NONE
CAP31_RS04565  870012 ..  870023 +  -4.4  -2.76696   TGGGTGAAGACGAAG                GTAC GTTA GTAC                 ATTGTTGAGAGGAGG  46 6
CAP31_RS04570 NONE
        uppS NONE
CAP31_RS04580 NONE
CAP31_RS04585 NONE
        rseP NONE
        bamA NONE
CAP31_RS04600 NONE
CAP31_RS04605 NONE
        fabZ NONE
CAP31_RS04615  879789 ..  879800 +  -2.2  -3.44146   GGCACAATCCGAACG                TGGA ATTA TCCG                 TTGATTATGGAAGCC  45 10
CAP31_RS04620 NONE
CAP31_RS04625  881541 ..  881558 +  -4.1  -2.70932   CACTGTTTTAGTCAG             CGCCTGCG TGA CGTA-GCG             TGGTTAACCAGCAAG  45 30
CAP31_RS04630  882090 ..  882138 + -14.5  -3.04144   ATGCGTCAGTATGGG TGACAGCAGCGCGGCACCCAG ATGCTTG CTGCGTGCCGCGCTCCAGCCA TGTTGCGGATCAGGC  80 50
CAP31_RS04660  886971 ..  886982 +  -5.8  -3.41527   ATCAGGCCGGCTTTT                GTGC CGTC GCAC                 TTGTGCTCAGGGTTA  56 79
CAP31_RS04675  890154 ..  890164 +  -5.4  -3.37091   TCCTGTACGGCCATG                 GGTT GAT AACC                 TTGGGTTTTAAGGAT  52 363
CAP31_RS04685  891714 ..  891733 +  -4.2  -4.24326   TCGCGCACGCCCGCA            GTCAGCTG CGGG TAGCTGCC             TTTTGGATGCTCTTT  65 461
CAP31_RS04695  893462 ..  893482 +  -2.4  -4.29106   AGTAGTGACACCGGC            GCGGGCGA CTTCT TCTACCGC            TTTCTTGGTATCGAA  60 478
CAP31_RS04725 NONE
CAP31_RS04730  901152 ..  901164 +  -3.3  -3.90048   CTGGAAAGACAGCGT                GCTGG GTG CCATC                TGTTTTTCAGCGGAC  56 111
CAP31_RS04735  902109 ..  902125 +  -3.7  -3.21099   CATACATCCGTCCCT              TTCCG GGATAAG CGGAA              TTGATGATGCGCGGC  47 5
CAP31_RS04740  903040 ..  903077 +  -7.7  -2.78596   CGCCGCAATATCGGG   CTGGTGATCACGGTGCT GAAA ATCGCCATGATGACCAG    TATGGTAAAGACCTG  54 106
CAP31_RS04905  939783 ..  939795 +  -4.9  -2.56046   GCTGTGGACGCAGGT                TTTTG GTT CAAAA                TAAGTTACAATTTCA  47 10
CAP31_RS04910 NONE
CAP31_RS04915  941039 ..  941093 +  -2.4  -4.10007   GAAAGATTGAACATC TCATGTCAATGGCACTCCAA-TAAGC ATGAC GCTTAATTCGAG-GAGGTTGACATGA TTTTCCGACAGTTAT  55 46
CAP31_RS04920  942208 ..  942224 +  -4.4  -3.53444   CTGTGCATACTCGAG             GCAG-GC GCTT GCACTGC              TTTCGCCCAGCATCA  52 394
CAP31_RS04930 NONE
CAP31_RS04935 NONE
CAP31_RS04940 NONE
CAP31_RS04945 NONE
CAP31_RS04950  950320 ..  950347 +  -4.8  -3.60971   GCGTTGTTGAGTATG        TCGAGGGTGGAGG GTG CCTCCGTTC-CGG        TTTCGCGGTTACGGT  54 249
CAP31_RS04965 NONE
CAP31_RS04970 NONE
CAP31_RS04975  953085 ..  953101 +  -6.5  -3.16232   AATTCAGGATAGACC              TGCTGCA ACC TGCTGCA              TGATTGTTTTCTCTG  57 6
CAP31_RS04980  953832 ..  953859 + -17.2  -3.12142   CATCGCCTCAAATAT        GACTGTTCATCC CCGA GGATGAACAGTC         TATCTTCCCTCTGCC 100 107
CAP31_RS04985  956917 ..  956952 +    -6  -3.18912   CCTAGCGCCGCCTTG    CCGGTAAGCGCAGGAT GAAA ATCATGGGCTATCCGG     TTAGTCAATGCATCG  54 8
CAP31_RS04990  958796 ..  958811 +  -2.5   -2.5893   CCTGAATAGACGATT              TGCTG AATCGC CAGCG               GGTTTTCATTTGAAG  39 32
CAP31_RS04995 NONE
CAP31_RS05000 NONE
CAP31_RS05005 NONE
CAP31_RS05010 NONE
         ggt  965630 ..  965655 +  -6.9  -3.14211   TCATTCCCCAGGCCG         GCATTGCGCTCA TTT TGAG-GCCATGC         TTGATGACCCAGAAT  54 249
CAP31_RS05040 NONE
CAP31_RS05045 NONE
CAP31_RS05050  971860 ..  971872 +  -3.4  -3.57561   ACACTGCCGGTGGCA                TCGT GATCA ACGA                TTTCAAAGGTTGCAG  51 20
CAP31_RS05055  972758 ..  972786 +  -5.2  -3.04398   AGTTGGAGTTCGAGA       CGGCGCG-CGTCG TTCG TGGCGATGTGCCG        ATTTTGGCAGCCGCA  50 146
CAP31_RS05060 NONE
CAP31_RS05065 NONE
CAP31_RS05070  974864 ..  974874 +  -5.4  -4.09511   GGAAAGGCGATTGGG                 CCAT GAA ATGG                 TTTTCGCAGGGTATT  66 20
CAP31_RS05075  975717 ..  975733 +  -5.8  -4.09739   CGCCAGGATTTCCAC              CTTGCC CCTAT GGCAGG              TTTTGGCAAGATTGC  66 57
CAP31_RS05095  979649 ..  979681 + -12.7  -3.02902   ATGCAGTGCGACAAT      CGCCCGGTTAGTTCT TGT GGAGCGAACCGGGTG      TAATCTTTTTCGATG  80 45
CAP31_RS05125  984920 ..  984935 +  -2.4  -3.04398   GGTGTTGCTCTAATT              CCGGCC TACA GACTGG               CTTTTCGAGGCGGGG  42 28
CAP31_RS05130 NONE
CAP31_RS05135  985919 ..  985948 +  -5.7  -3.35046   CTACGGATATCGTTG       CGAAGAATATCTG ATAT CGGATATTCCCCG        TGTTTCACGGCCTCC  56 12
        arsC  990254 ..  990280 +  -2.9  -3.72576   CCAGCGCCAGATCGT         TTGGGGAGGTG CCGAA CGGCTCCTCGA         TTTCGTCGCCCAGCG  53 486
        trxB NONE
CAP31_RS05200 NONE
CAP31_RS05205 NONE
CAP31_RS05210 NONE
CAP31_RS05215 NONE
CAP31_RS05220 1000071 .. 1000098 +  -5.6  -4.09243   GTGCCTTTCTTCATT        TTGCGGATGAAA TATT TTTCAAACGCAA         TTTTGGCCAGATGTA  64 236
CAP31_RS05230 1002822 .. 1002841 +  -3.6  -3.28309   TTGTACAACCTGTCA            TAGCATTA TGGA TCATGCTA             TTGGCTTGTATGTAT  47 23
CAP31_RS05235 NONE
CAP31_RS05240 NONE
CAP31_RS05245 1007074 .. 1007088 +  -4.3  -2.86124   GGACAAAATCGCGCT               TTTGC TGCAC GCAAA               TCCTGTTTGAGTCGA  46 1
CAP31_RS05250 NONE
CAP31_RS05255 1008357 .. 1008388 +  -7.3  -4.02571   GCTGCCTGAACGATG      CAGATCAAGGCCG CCTGTC CGACCTTAATCTG       TTCTTTCATAAGTTA  71 32
CAP31_RS05325 NONE
CAP31_RS05330 NONE
CAP31_RS05335 NONE
CAP31_RS05340 NONE
CAP31_RS05345 1023615 .. 1023631 +  -4.3  -2.62184   CGGATAATAACCGGA              CTGGGCA ATT TGGCCGG              TCATATAGAGGCGCA  43 343
CAP31_RS05365 NONE
CAP31_RS05370 1029291 .. 1029313 +    -4  -3.77773   GGCCGTTTGCATCCA           GTGCACCGGA CAT TCTGGCGTGC           TCTTTTCCGTTCTTG  56 91
CAP31_RS05380 1030284 .. 1030321 +  -6.1  -3.69354   AGCCATTATTTTACC   GTCGGTAAACCGGCTTG CTGC CAAGCCAGGATGCCGCC    TTTCAAATTGTAAAC  64 411
CAP31_RS05415 NONE
CAP31_RS05420 1038978 .. 1038988 +  -3.2  -4.14739   TCATGATATCGGTTT                 TGCT GTG GGCA                 TTTTCCGGTGCGTAA  58 398
CAP31_RS05440 1041421 .. 1041431 +  -4.6  -4.41616   GCCCATACGTAAATG                 TCGG GCG CCGG                 TTTCTTTGCAGGAAT  68 344
        dksA NONE
CAP31_RS05455 1042917 .. 1042956 + -26.8  -2.65112   ACTGGACAGAATGCA  GGCAACAAAAAAGCAGCC AACT GGCTGCTTTTTTGTTGCC   TGCTATGGCTGCATT 100 77
CAP31_RS05485 1050153 .. 1050163 +  -6.8  -2.57564   ACACACAAACTAAAA                 GGCA CAA TGCC                 ATTGTGGCAACATCG  55 88
CAP31_RS05490 1051304 .. 1051322 +  -5.2  -2.98651   GGCTTTCAGATAACG             GCTGCC CATGAAT GGCGGC             ATGTTTTATATTCTT  50 100
CAP31_RS05510 NONE
        recJ 1056367 .. 1056395 +  -3.2  -2.90392   GCCAGAGGCAACAAA       TCATACAGGCGGT CTTC ATCGCCTA-ATGA        TGTGATTGAAAAATA  42 120
CAP31_RS05520 1057754 .. 1057765 +  -2.2  -2.92475   TTTTCCTGGATACGC                CTCT TAAT AGGG                 ATTTGTAGCGATGAC  40 113
CAP31_RS05525 1059836 .. 1059855 +   -10  -2.54812   CGATGTGCGCCTTCG            GGCGTAGG GCGG CCTATGCC             ATTGCTGGTATCGAT  62 325
CAP31_RS05555 NONE
CAP31_RS05560 1067178 .. 1067189 +  -3.6  -3.51158   CCCGGCCTCGGGAAG                GCTG GAGG CGGC                 TTAATGTTATTTCGT  51 10
CAP31_RS05565 1068944 .. 1068961 +  -5.5  -4.07568   GTCGAGCCGGTAGCC             CACTGCG GGTA CGGAGTG              TTTTGCGGGCAGGGG  64 403
CAP31_RS05595 NONE
CAP31_RS05600 1073711 .. 1073726 +  -2.6  -5.54192   AGCAGCACTGACACC              CGTCTAA ATT TTAG-CG              TTTTTTTGAATTGAT  82 117
CAP31_RS05605 1074138 .. 1074161 + -18.2  -5.63517   TTCACGCAACAAAAA          GCCCCGAGGT AACC ACCTCGGGGC           TTTTTTATTTACGCC 100 46
CAP31_RS05615 1077506 .. 1077519 +  -4.5  -3.63862   GGCATGAGCGTCGCT               TGCCT AATC GGGCA                TTGGTTGTTATTGTG  53 34
CAP31_RS05620 1078329 .. 1078341 +  -3.4    -5.055   CCGGATTCGCTCAGT                GCAT CGTAA ATGC                TTTTTTCGACATTGC  77 461
CAP31_RS05635 NONE
CAP31_RS05640 1084673 .. 1084698 +  -9.1  -4.77896   GGATGACAATAAAAA         GGGTTAAATCA TTTC TGATCTAACCC          TTTTTGAATTGATTG  93 58
CAP31_RS05690 1093720 .. 1093737 + -11.3  -5.76237   CAGCACAGCATTTGA             GCCCACA TTCA TGTGGGC              TTTTTTGTTTCTATC 100 61
CAP31_RS05705 NONE
CAP31_RS05710 1097909 .. 1097943 +    -5  -3.34088   GAGGGTGAAACCGGT    GCGGTTTGCGC-ACC GGGTAG GGTCGTTCAAGCCGC     TTCCTGTATCATCAT  54 211
CAP31_RS05730 NONE
        sdhB NONE
CAP31_RS05740 NONE
CAP31_RS05745 1105761 .. 1105780 +  -2.1  -2.53164   GACCCGGCGTGAGTA            TGTGC-CG ATGAC CGAGCGCA            GTTAATCATGGGTGG  39 1
CAP31_RS05750 NONE
CAP31_RS05755 1110114 .. 1110142 +    -6  -3.21218   ATTCTGTCGGGAATG       GGCCTGAACCGAC ACGC GT-GGTATAGGCC        TTGGTGATGCCCAAT  52 493
CAP31_RS05800 1119477 .. 1119510 +  -8.1  -2.70932   CGGGCATGATTATAA     TCTCGGCTGTACTGA CCTA TCCGTACAGCCGAAC      TGATTAAAGCCGCAG  61 32
CAP31_RS05815 NONE
CAP31_RS05820 NONE
CAP31_RS05825 1124534 .. 1124562 +  -9.7  -5.25803   GCAGGACGATCCATT        GCCGCATATTT TTAAATT GAATATGCGGC        TTTTTTATGCGAATT 100 162
CAP31_RS05830 NONE
CAP31_RS05835 NONE
CAP31_RS05840 NONE
CAP31_RS05845 NONE
CAP31_RS05850 1131398 .. 1131411 +  -9.5  -2.75064   TTTAATATATTTACA               CCGCC TACC GGCGG                TAATTGAATGAGGGG  68 5
CAP31_RS05855 NONE
CAP31_RS05860 NONE
CAP31_RS05865 NONE
CAP31_RS05870 NONE
CAP31_RS05875 NONE
CAP31_RS05880 1137607 .. 1137622 +  -3.2  -3.54051   GAGAATTGAATCCCC              GATGAG TCTT CTCAGC               TTATCTGCAGTTTCT  48 237
CAP31_RS05910 1143686 .. 1143701 +  -3.3  -3.20617   ATATAAACATAGTGT              TACGT ATTGGC ACGTA               TGTTGCATTTAGAAT  47 222
CAP31_RS05915 NONE
CAP31_RS05920 NONE
CAP31_RS05925 NONE
CAP31_RS05930 NONE
        glnT NONE
CAP31_RS05940 1149397 .. 1149408 +  -2.2  -3.85698   ACCTGCTACCGAATG                CTGT TGCC GCAG                 TTTCTCCGCGGCGCG  51 473
CAP31_RS05960 1152349 .. 1152360 +  -2.2  -2.78596   TAAGCAAGAATGCAA                TCGG TTAA TCGA                 TGTAATGAAAAAATG  40 18
CAP31_RS05965 1153144 .. 1153155 +  -5.8  -3.38786   GTGTTTTCGGCCGAC                GCGA GTCT TCGC                 TTGCTGTTGGGTATC  56 61
CAP31_RS05970 NONE
CAP31_RS05975 1155127 .. 1155137 +  -2.4  -5.27335   CGAGAGGCCGGTAAT                 CCTG CTG CTGG                 TTTTTATTTGGGGAG  76 67
CAP31_RS05980 1155854 .. 1155868 +  -7.2  -2.62396   TGTCTGCAAAATAAG               TGCATT TAC AATGCA               TCCTATAAGACAATA  55 200
CAP31_RS05985 1159754 .. 1159768 +  -2.8  -2.75039   AGCCAGACAGAGAAG               TTGCTG TAT CAGTGA               TAATTGCGGTATCTG  41 180
CAP31_RS05990 NONE
CAP31_RS05995 1162795 .. 1162828 +    -9  -3.74519   ATGATAAATCTACGA     TGCCTCTTGATTAG CGTGAT TTGATCGAGAGGCA      TTTCATACAACTGTT  76 438
CAP31_RS06020 1164885 .. 1164896 +  -5.8  -3.53933   CCATTATACCAATAG                CTGG CATA CCAG                 TTGTCGTCTTGGTAT  58 460
CAP31_RS06035 NONE
         cls 1169417 .. 1169430 +  -2.3  -3.74224   GCTCGATTCGGCATC               GCGCA TCAA TACGC                TTTCGGTGATTTCCA  51 433
CAP31_RS06065 NONE
CAP31_RS06070 1173604 .. 1173621 +  -4.8  -2.63858   GTGTTATCAGCTCAT             GATGCG GTCAAA CGCGTC              CTTGTCGGTCTGGTA  47 45
CAP31_RS06090 1177126 .. 1177146 +    -9  -3.60627   CGCCATAATTTCTGA            GCGGCATG GACCG CATGTCGC            TTTGGAATGGCGTCA  72 60
CAP31_RS06095 NONE
CAP31_RS06100 NONE
        treS 1184635 .. 1184653 +    -3  -3.64812   ACCGGGCAGAGCGCC             CCCGCC TAGGTAT GGCAGG             ATTTTTTGAGTAAGG  49 17
CAP31_RS06110 1185518 .. 1185536 +  -3.8  -3.14146   CAAAAACAGTAATGA             TGGAGTCA AGA TGAGTCCG             TTACCTACTGTTCTG  47 127
        glgC NONE
        glgX 1188976 .. 1188990 +  -3.5  -2.71712   GAACCAAAATGAAAC               GCGTG CACGA CATGC               CTTTCGGCGCGACCG  43 29
        treZ NONE
CAP31_RS06130 1195981 .. 1195993 +  -4.9  -3.05715   GTTATGCATCCATGC                TGTAT TCA ATACA                TTCCCTACCCGGCTT  50 85
CAP31_RS06135 NONE
CAP31_RS06140 1198005 .. 1198022 +  -2.5  -2.74488   TCGAACACATCCGCA             CCGAGAC GGCG GCCACGG              TCCTTGAGGTGGTTG  39 442
CAP31_RS06185 1207488 .. 1207501 +  -2.5  -3.66178   ACTTAAGGAGGGATT               TATTA TGAA TAATA                TTTCAAATTCGCAAC  50 57
CAP31_RS06190 1208661 .. 1208689 +  -5.9  -2.77791   CATGGAAAGGAGCCG        GTGACGGATAAGG CTC CATAATCCGGCAC        TGATCTTCCCTTCGA  50 478
CAP31_RS06205 NONE
CAP31_RS06210 NONE
CAP31_RS06215 NONE
CAP31_RS06220 1212586 .. 1212612 +  -5.9  -2.53995   AATGGGAAAAGCCTG        C-CA-GCCCCCGT TTT ATGGGGGCATGAG        TACGTTACCGTACAT  49 150
CAP31_RS06225 1213177 .. 1213194 +  -2.6   -4.7219   CGATAGCCGTCGGAC             GCGCTG GTCAAG CAGCGG              TTTTGTATTCATATC  65 58
CAP31_RS06230 NONE
CAP31_RS06235 1214914 .. 1214941 +  -9.2  -2.84276   ATCGGAAATTGACCT        GTCAGATATGGT CATG GCCATATCTGCC         TGATTAGTTCGACAT  65 164
CAP31_RS06240 1215863 .. 1215887 +    -5  -3.82748   TTACGCACAACAAAA         TCGGGGATGCC TGAT GGT-TTCCCGA          ATTTTTTCTATCATC  59 56
CAP31_RS06245 1217205 .. 1217248 + -11.8  -3.23692   GTGTTCACGTACAGA GCCGGGAGCATTGAAGGTCT TATT ATGCCTTCAATGCTTCTGAC TTCCTCGTCGTACTG  79 205
CAP31_RS06250 NONE
CAP31_RS06255 1218263 .. 1218287 +  -5.1  -3.31461   ATGTATCAGAGGTAA          CGCATTATT AATATCG AGTAATGCG          TTATCCGAATCGATG  54 42
         pgl NONE
CAP31_RS06280 1222604 .. 1222618 +  -5.7  -2.72144   TGTAGTCGGGAATGA               CATGG ATAAC CCATG               CTTTGGCAGCAGTGC  48 189
CAP31_RS06340 1237066 .. 1237080 +  -9.2  -3.54638   CTAATCTGGACAGCA               GCGCCG AAT TGGCGC               TTTAAGCGCGATTAT  72 6
CAP31_RS06345 1238266 .. 1238298 +  -4.9  -3.07962   GCCGCTTAACAATTA      CGAGGTCTTTATTTT TGC AGCATGAAGGTCTCG      TATTCCAGTATCGCC  50 40
        galE 1251733 .. 1251743 +  -2.4  -3.61517   TTTGCGGAAAAGTAT                 GGGC TTC GACC                 TTCTTGCGGAAGCGT  48 285
CAP31_RS06395 1253185 .. 1253222 + -13.6  -3.66844   ATTTGAAAGCATAAT   TATCGGAAACGATGGA TGTTTT TCCATCGTTTCCGGAA    TTATTCCGGTCTGCG 100 27
CAP31_RS06405 NONE
CAP31_RS06410 NONE
CAP31_RS06415 1259275 .. 1259290 +  -3.2  -3.17392   CATTAATCCTTTGGC              CGCCAT GGGG ATGGAG               TTGCATTGAACCCTG  45 1
CAP31_RS06420 NONE
CAP31_RS06425 NONE
CAP31_RS06430 NONE
CAP31_RS06435 1260932 .. 1260957 +  -4.1  -3.96216   TTACCTGCGGAAAAG         TG-CGTCGAA CGATTTT TTCGACGACA         TTCTTTAGATCCAGC  58 70
CAP31_RS06465 1268635 .. 1268646 +  -4.4  -3.26568   GCGGCATGGGGGGCG                TGCA TGTC TGCA                 ATTTTGTAAGTATGG  49 220
CAP31_RS06470 NONE
CAP31_RS06475 1269462 .. 1269472 +  -6.8  -4.24204   TTTATGTCGCCAGTT                 CAGG CGG CCTG                 TTTTAGATATCGATC  74 61
        tsaB NONE
        rimI NONE
CAP31_RS06490 1271107 .. 1271136 + -16.7  -3.36983   AAGGATGTTGGTCAA       TAAAAAAGCCCGT CGAA ACGGGCTTTTTTA        TTGCTTGCCGGTTTT 100 43
CAP31_RS06500 NONE
CAP31_RS06505 NONE
CAP31_RS06510 1275648 .. 1275659 +  -4.4  -4.33417   GTTCCACCTTACCGA                TCAG CTTG CTGA                 TTTCTTCTGCATGCA  65 275
CAP31_RS06520 NONE
CAP31_RS06525 1276744 .. 1276775 + -13.8  -4.75372   TGAATGATCATTTGG      CGGGCAGCTTCT TATTAACC AGGAGCTGCCCG       TTTTTGGTCCATGCT 100 34
CAP31_RS06535 1278828 .. 1278845 + -11.3  -5.74122   TTTAAAACGATGACA             CAGCAGG TTCG CCTGCTG              TTTTTTTATATAGTC 100 53
CAP31_RS06540 NONE
        aroA NONE
CAP31_RS06550 1282459 .. 1282473 +   -10  -3.72347   CTTTTTTAAATTAAC               TCCGCA TTT TGCGGA               TATTTTGGGTCATTT  79 42
CAP31_RS06555 NONE
CAP31_RS06560 1284538 .. 1284562 + -14.4  -5.80817   TGGTGCATCAGAAAA          GCGGCATATC GTTTA GATATGCCGC          TTTTTTTATATTAAG 100 51
CAP31_RS06565 NONE
CAP31_RS06570 NONE
        pyrF NONE
CAP31_RS06580 NONE
       rfaE1 NONE
CAP31_RS06590 NONE
CAP31_RS06595 1292303 .. 1292323 +  -6.2  -3.96148   GTAATCTGCAAGAGA           GG-TGCAGT CGTC ACTGCAGCC            TTTGTCATCAGGGCA  66 197
CAP31_RS06600 NONE
CAP31_RS06605 NONE
CAP31_RS06610 NONE
CAP31_RS06615 1295738 .. 1295749 +  -3.6  -3.32844   TAACAAGAATAATGA                TGGG ACGA CCCG                 TTATGAAATGGGAAC  49 68
         uca NONE
        atzF NONE
CAP31_RS06630 1302751 .. 1302763 +  -3.3   -3.3692   AACCGGGCGGAACCT                CGGCA TTT TCCCG                GTTTTTCGGATGGAA  49 51
CAP31_RS06635 NONE
CAP31_RS06640 1305042 .. 1305055 +  -3.7  -4.57837   GGGAACGAAAACATT               GTGGG TACC CCCCC                TTTTTAGGGGCGTCT  67 5
CAP31_RS06690 1315588 .. 1315625 +  -5.5  -3.18768   CTACACCTTCTAATG   GTTG-GGGCCGGGCAG AGGTCTG CTGCCCGGTCAACGGC   TGTATTGGTCTTAAC  54 28
CAP31_RS06695 1316909 .. 1316948 +  -4.1  -2.80816   ATCCTGATCCAATGT  GATTTGCTGCCGCCCGT TGTAGT GCGGGAGGCAGGTAACC   TGTCCTGAGTGAGGA  46 34
CAP31_RS06700 1317401 .. 1317422 +  -9.5  -5.50313   GTTTATCAAATTAGA           CCGTTGATA GTTT TATCAGCGG            TTTTTTCGTTTTATA 100 100
        urtA 1319128 .. 1319159 + -12.3  -3.37755   CAGTAAGCGTATGAC      CCACTTGCGCCGC CGGATA GCGCTGCAAGTGG       TATTTGGCAATATCT  85 35
        urtB NONE
        urtC NONE
        urtD NONE
        urtE NONE
        amiE NONE
CAP31_RS06735 1326148 .. 1326177 +  -7.1  -3.86202   TACTCCAGGCGGTTA       CCGGATTCGTGCT ATCG ATCATGCATCCGG        TTTGATGTGATCCAG  68 51
CAP31_RS06745 1328357 .. 1328375 +    -6  -4.67011   CACGCATCTGGATGA             CGTGAAGT ATC GCTTCATG             TTTTTCAATCAACTT  74 21
        ureA NONE
CAP31_RS06755 NONE
        ureC 1330737 .. 1330751 +  -4.2  -4.36774   GCGCAACGCTATTTC               CTGTTC TGA GTACAG               TTTATGTTATTGATT  64 17
CAP31_RS06765 NONE
CAP31_RS06770 NONE
        ureG 1332800 .. 1332814 +  -2.1  -4.19506   AAAACCCCGGTAAAT              C-GGCT GTCC AGCCCG               TTTTGCGCTTGGCAT  55 247
CAP31_RS06780 NONE
CAP31_RS06785 1334601 .. 1334623 + -14.9  -5.37345   CAGCCGGATTGCAAA           GGAGGCGCA TTGAT TGCGCCTCC           TTTTTTATGCTTCGC 100 52
        hflX 1344075 .. 1344085 +  -3.2  -3.25652   CTATCGCGCAGCGTT                 GAGT ACC GCTC                 TGTTAGTTAGCTGAA  45 50
CAP31_RS06840 1344690 .. 1344705 +  -7.6  -2.92192   AGTTTGCCTGAATTT              GCAGAT CAGT ATCTGC               TGTGCTTGGGTGAAA  59 30
CAP31_RS06845 NONE
CAP31_RS06850 1345888 .. 1345906 +  -5.3  -3.81137   GAATTGAGCAAGACA             GGAAGCT CAGAA AGTTTCC             TTTGCCTGTTTCAAG  59 504
        purU NONE
CAP31_RS06895 NONE
CAP31_RS06900 NONE
CAP31_RS06905 NONE
CAP31_RS06910 NONE
        glnT NONE
CAP31_RS06920 NONE
CAP31_RS06925 NONE
CAP31_RS06930 1359928 .. 1359940 +  -3.3  -2.62463   CACTGGCGGGAACGG                ACTGG ATA CCAGG                ATTCTGAATAATCGA  43 6
CAP31_RS06945 NONE
        flhA NONE
        flhF NONE
CAP31_RS06960 NONE
        fliA NONE
        motC NONE
CAP31_RS06975 1370275 .. 1370286 +  -2.2  -5.16572   GATGACCACCAAACC                CGTC AATT GATG                 TTTTTTAACTTCAAT  73 16
CAP31_RS06980 NONE
CAP31_RS06985 NONE
CAP31_RS06990 1373954 .. 1373998 + -14.4  -2.89683   CGCCCAGCCCCTGGC TGGCTATGCAGCGGTATCTG GCGGG TAGATGCGGCTGCATTGCCA TGTATACGCTACGGT  80 229
CAP31_RS07040 1384243 .. 1384264 + -13.1  -5.38054   AGTTTAAAAAAAAAA           CGGCTATCT GCGC AGATAGCCG            TTTTTATTTGTGCAG 100 52
CAP31_RS07050 1387219 .. 1387233 +  -3.5  -3.06312   GACGCTGTTTCGAAG               CCAGG GTAGG CTTGG               TTACATGCCGCGTTT  46 126
         smc NONE
CAP31_RS07075 NONE
CAP31_RS07080 NONE
CAP31_RS07085 NONE
CAP31_RS07090 1396135 .. 1396145 +  -5.4  -3.14931   AAGCCGAGGAAATCA                 TCAG CTT CTGA                 TTCATCCAGCCTCGC  54 15
CAP31_RS07095 1397196 .. 1397207 +  -5.8  -3.84712   CTCTCATTGAGGACG                TCGC AGAG GCGA                 TTTGGTGTGCCATTA  61 405
CAP31_RS07105 1398890 .. 1398904 +    -7  -3.63895   TGTGATCGGGTAAAT               GCAGCC AGG GGCCGC               TTTGGGATAATTGCC  60 461
CAP31_RS07180 NONE
CAP31_RS07185 1420169 .. 1420183 +  -2.8  -2.85351   CGTTGATTCAGCATG               CATAAC CAC GTCATG               TATCGTATGGAAAGC  42 35
CAP31_RS07190 NONE
CAP31_RS07195 NONE
CAP31_RS07200 NONE
CAP31_RS07205 NONE
CAP31_RS07210 1425313 .. 1425349 +  -5.2  -4.36774   ACAGGTGACCGGCAG   AGGCTGGA-ATCGCTTT CTCC AGAACGATATCCAGCCC    TTTATGTTCTTCCTT  70 448
CAP31_RS07220 1427896 .. 1427907 +  -2.2  -3.76952   AAAACGTTCGACCGT                GTGC TCGC GTAC                 TTTCAATTCCGTAAG  51 501
CAP31_RS07250 NONE
CAP31_RS07255 1437885 .. 1437896 +  -2.2  -3.33744   AAATGGGCAAGGGAA                TCGT ATGA GCGA                 ATTTTTCAAAGGGCA  45 134
CAP31_RS07260 NONE
CAP31_RS07265 1439657 .. 1439690 +  -5.4  -3.05463   AGCAAAACTGAAAGG    TCGCAATCGC-GT-AG AGAT CTGACTGCGATGGCGA     TTCAATAAAGCCGAT  52 4
CAP31_RS07305 1447994 .. 1448012 +  -5.2  -3.55447   TTTTTCAGGGCAAAT             CGGGGC AAAAACC GCCCTG             TTATGTCATGCCTGA  56 111
CAP31_RS07310 1449504 .. 1449516 +  -2.7  -3.49114   CGGCATATCCGTCAT                GAGAT TTG ATTTC                TTATCATCTCGTCTC  49 17
CAP31_RS07315 NONE
CAP31_RS07320 1451802 .. 1451820 +    -4   -5.4251   TGTCGAATAATATAA             TATATTGA TTT TTAATATA             TTTTTTATATGTACA  83 31
CAP31_RS07325 1453628 .. 1453641 +  -3.9  -2.56571   AAGCCCGCAACGTCC               TTGAT ATTA ATCAA                TAAATTCAATATATA  42 120
        fliS NONE
CAP31_RS07335 NONE
CAP31_RS07340 NONE
CAP31_RS07345 NONE
CAP31_RS07350 NONE
CAP31_RS07355 NONE
CAP31_RS07360 NONE
CAP31_RS07365 1460358 .. 1460373 +  -6.1  -2.68952   TTTAGAGTATCTTGC              GCCTG TTTCTC CAGGC               TGAATTGTGTTTGCG  48 58
CAP31_RS07375 1462319 .. 1462330 +  -5.8  -3.18912   GCAATTACATGCTCA                GGCT GAAG AGCC                 TTCATGCATGAATGG  52 92
CAP31_RS07440 NONE
CAP31_RS07445 1473884 .. 1473900 +  -2.1  -3.92542   GGCATACACCATGGC              CTCACGC ATT GCCGGAG              TTATTTCCGCCTGGG  54 231
CAP31_RS07480 NONE
CAP31_RS07485 NONE
CAP31_RS07490 1481753 .. 1481777 +  -5.8  -3.85698   GCTTCTTTCAAGCGT         TCCTGACCGCGT TGT AC-CGGTC-GGA         TTTCTCCCGCCAGAC  61 164
CAP31_RS07500 1483860 .. 1483875 +  -6.8  -2.59431   CCATACCGGACATTT              TTCCGG CGTA CCGGGA               TCCATTCTGCGCACA  50 399
CAP31_RS07525 NONE
CAP31_RS07530 NONE
CAP31_RS07535 NONE
CAP31_RS07540 NONE
CAP31_RS07545 1489726 .. 1489761 + -19.2  -3.87869   AATCAATGATGTAGC    TCGCGCCTGATTCATC CAGT GATCAATCAGGCGCGA     TTTATCCCGACTTAA 100 39
CAP31_RS07550 1490043 .. 1490060 + -11.3   -5.4505   GTATTCAATAAAAAA             GCGCACT TCAA AGTGCGC              TTTTTTATTGAACCA 100 50
CAP31_RS07560 1491192 .. 1491219 +  -4.8  -4.19258   CGGTCTTATAAAACA        CTGGCGGTGCATC GAG GCTCCAC-GCCAG        TTTTCAATACCGTAT  64 30
CAP31_RS07615 1500586 .. 1500600 +  -4.2  -3.64703   GTCGATGATGAACGT               ATTGCG TTT CGCAAA               TTTCACTACCAGCAA  54 152
CAP31_RS07630 1502557 .. 1502584 +  -2.7  -4.41494   CCACGGTGGAATCAC        TGCCGGATTTG GCCACA TAAATCCTGCG         TTTTAATTCGGCATC  64 254
CAP31_RS07650 1506858 .. 1506868 +  -3.2  -3.50447   GTGTGCTGCTTGCAA                 GGTT CAA GACC                 TTATGTCAGGCTTCG  49 106
CAP31_RS07655 1507596 .. 1507643 +  -2.1  -3.62775   ATCTCCTTTAACGAG GCCTGT-GCA-TGCACAGC-TCTT GGC GAGACGTTGAGCAGTGCCACCGGC TTATTCACAAATGCT  48 224
CAP31_RS07685 NONE
        dapD 1516795 .. 1516808 +  -4.5  -4.65895   CATATTCAATATAAC               CGCAG TAAA TTGCG                TTTTTCGGTGAGGGC  69 43
CAP31_RS07720 1521136 .. 1521156 +  -3.2  -4.07568   AGGTTTTGCCCAACC           GCATCGGGG ACAA CGCCGA-GC            TTTTCGGCCGGGAGG  58 96
CAP31_RS07795 1532406 .. 1532420 +  -2.9  -4.77438   CAGGTTAAATCTCGT               TATCA TCGAC TGATA               TTTTTGATGATAGCT  69 92
CAP31_RS07800 1533781 .. 1533811 +  -3.4  -3.22223   CAATGACACACCGAA     TCTGGCAGCCAGTGC ACGT GC-CTGGC-G-CAGA      TTGATGCTGCGCTTG  46 59
CAP31_RS07845 1539875 .. 1539910 +  -4.7  -2.75712   AATTCCATCATGCTA   CGCCCTG-GCATGAAGC CAGC GCT-CAGGCCCAGCGCG    TACTTGACTGCATGA  47 182
CAP31_RS07850 NONE
CAP31_RS07855 NONE
CAP31_RS07860 NONE
         tal NONE
CAP31_RS07870 1543538 .. 1543553 +  -4.7  -2.81312   ATGCAGCACATTAGA              CGAGA CCCGGT TCTCG               TCTAATCCCTCCGTT  49 51
CAP31_RS07875 NONE
        serB NONE
CAP31_RS07885 1548435 .. 1548446 +  -4.4  -3.57561   TTATTCTTTTGGCCG                GGAT GCAG ATCC                 TTTGCGAGCTTAAGC  54 335
CAP31_RS07895 1549482 .. 1549509 +  -6.4  -2.94912   CTTTTCATCCGGATA        GAGTCGAGACGTT GTC AGC-TCTTGACTC        TGTATCCGTTCACCC  55 51
CAP31_RS07940 NONE
CAP31_RS07945 1560192 .. 1560215 +   -11  -4.74103   TTGTCGGCATCATAA          CGGGGTTGGC GAAA GTCAATCCCG           TTTTTCAATTAAACA 100 44
        dnaJ 1561425 .. 1561452 + -21.4   -4.3208   GGCTATCCGCAACTC        CCGTCCCGCTTG CATG CAAGCGGGACGG         TTTTCAATTATACGG 100 66
        accC NONE
        oadA NONE
CAP31_RS08050 1579058 .. 1579077 +  -6.4   -4.1466   TTCGCCTTTCCCGAT            CCTG-GCTG TGC CGGCTCAGG            TTTTGCAGGTTCCGT  66 321
        gloB 1582728 .. 1582749 +  -4.3  -3.90112   CTCAAAAACGATTTT           CGTACGTCC TAAG GGACTGACG            TTTCCTTGCCCACCC  58 14
CAP31_RS08075 1584979 .. 1584996 +  -4.1  -4.08216   CAGCGCACTGGTAGG             CTCATCG CATA CGATCAG              TTTTGGCCGCACTGC  60 490
CAP31_RS08100 1591950 .. 1591967 +  -9.9   -5.4505   TAGCGGCGTAAAAAA             CCCAAAC CCAG GTTTGGG              TTTTTTATTGGCCAA 100 56
        hpnC NONE
        hpnD NONE
CAP31_RS08160 NONE
CAP31_RS08165 1604431 .. 1604441 +  -6.8  -3.56006   CTTGTCCATAAATAC                 TGGC ATC GCCA                 TATTTGATTAACTAT  63 128
CAP31_RS08170 NONE
CAP31_RS08175 NONE
        pilV NONE
CAP31_RS08185 NONE
CAP31_RS08190 NONE
CAP31_RS08195 NONE
CAP31_RS08200 1611561 .. 1611578 +  -9.9  -3.21225   ATAATTCAATTTCAA             GTCGCAT CAAA ATGCGAC              TTGCCTGATTTTTCA  71 75
        thiO 1612774 .. 1612785 +  -2.2  -3.63569   ATGATTTCATGGTAA                GC-CG ACA CGAGC                TTGTTGCGCACTTGC  48 53
CAP31_RS08215 NONE
CAP31_RS08220 NONE
CAP31_RS08225 NONE
        fliI 1618106 .. 1618122 +  -2.1  -3.03034   CGCTACAATGAAACT              GTCAGAG CAT CACGGAC              TCGTTTCTAAGGTTT  42 59
        fliJ NONE
CAP31_RS08240 NONE
CAP31_RS08245 NONE
CAP31_RS08250 NONE
CAP31_RS08255 NONE
        fliO NONE
        fliP NONE
        fliQ NONE
        fliR 1624229 .. 1624243 +  -4.2   -3.3164   AGTAACGAAAACATG               CCGGTT ATA AACAGG               TTCTCCGCGTCACTT  49 296
CAP31_RS08400 1648506 .. 1648536 +  -3.4  -3.02461   TGAAGTTGATAATTT       TTTTTGCAGATTAT GTT AAAGTTTGCAAAGA       TATTGCCGACAATTC  45 38
        flgM NONE
CAP31_RS08410 1649880 .. 1649906 +  -6.5  -4.13767   TCGGGACAAATCTCG        CGCCATG-CGCG TATG CGCGCCAGGGTG         TTTTCGGCTGCAGCC  68 516
CAP31_RS08420 1651265 .. 1651275 +  -5.4  -3.73224   CAGGAAATCGCCTAC                 TTCC TGC GGAA                 TTTCATGGGCAATAA  59 328
CAP31_RS08440 NONE
CAP31_RS08445 NONE
CAP31_RS08450 NONE
        folK 1657033 .. 1657045 +  -5.5  -3.57561   CTAACCCGGTAAAAC                CCTTC TGT GAGGG                TTTCACGAATTCGAC  58 111
CAP31_RS08460 NONE
        panB NONE
CAP31_RS08470 1659469 .. 1659488 +  -4.9  -3.21994   ACAACGGCAATTTAC            CTCCGTC TTTCAT GACGGCG             TCTTCGGTCTTTTTG  49 130
CAP31_RS08520 1672085 .. 1672105 +  -2.6   -4.5442   ATTCGGGATTATAAG           CGACCAGCAT CAG ATGC-GG-CG           TTTTGTCATTCGCGC  65 406
CAP31_RS08530 NONE
CAP31_RS08535 1674310 .. 1674339 + -13.9  -2.74987   ATTTAACCGGCCCGC       TCGTTATATTAGA ATAA TCTAATATAACGA        TAAATTTATATATCA  83 132
CAP31_RS08540 NONE
CAP31_RS08545 1676076 .. 1676120 +   -15  -4.05788   AGTACCGCAGCAAAA TGCGCCCTGCGCGATCGG CATTGCAGA CCGGTTGCACAGGGCGCG TTTCATTTCAGCGCC 100 46
         rnr NONE
CAP31_RS08560 NONE
CAP31_RS08565 NONE
CAP31_RS08570 NONE
CAP31_RS08575 1681973 .. 1681993 +  -2.4  -3.05816   CGAATATGATTAAAT            GCGCCCCT CATTA AAGGGCGG            TTAGCTCAGCGGTAG  42 70
CAP31_RS08580 NONE
CAP31_RS08585 NONE
CAP31_RS08590 NONE
CAP31_RS08595 NONE
CAP31_RS08600 1685285 .. 1685295 +  -5.4  -2.54896   GTGCAGATCGCGCCG                 TTGC GTA GCAA                 TGAATTCAGTACGCC  46 435
CAP31_RS08610 1685771 .. 1685791 + -12.5  -3.65902   GCTTTTTTTGAGCAA            CGCGAGCCC GTA GGGCTGGCG            TTTCCATAACCTGCA  93 70
CAP31_RS08655 1694864 .. 1694889 + -14.8  -5.40464   CACCAGACAAGACAA         CGGCTCAGGA TTAAAT TCCTGAGCCG          TTTTTGTTTGTGCTG 100 161
CAP31_RS08660 NONE
        hemN 1698068 .. 1698085 +  -5.5  -4.05389   ACCTAGTGAAGCTGC             G-CCGCGG TAT TCGCGGAC             TTTGTAATATATCTA  66 1
CAP31_RS08690 1702214 .. 1702231 +  -2.7  -3.14848   CGGGCAATGGCGCTA             T-CTCGCT GCC GGCGAGCA             ATTTTAATCGGGACG  45 1
CAP31_RS08695 1703983 .. 1704031 + -23.6  -3.90241   CCGAGTAAATCGGGC TGACCCTCATGCAAAAGGCCGGGA ATA TCCCGGCCTTTTGCATGAG--TCA TTATTCTGCTTCCTC 100 33
CAP31_RS08750 NONE
CAP31_RS08755 1713360 .. 1713383 +  -6.6  -3.41936   AAGTTGACGCCCCAG          GCGCGTTAGG CTAT CATGGCGCGC           TGTTTGAAGTTGCTG  59 40
CAP31_RS08760 1713480 .. 1713492 +  -3.3  -2.98823   TTATAGCCTTACCGA                GGGTT CGA ATCCC                TCTCTCTCCGCCAAC  45 0
CAP31_RS08765 1713670 .. 1713689 +  -4.2  -5.38326   ACCAATCAATTCAAA            GGCTTGCA GAAA TGCAGGCA             TTTTTATTTCCTTAA  83 37
CAP31_RS08800 NONE
CAP31_RS08805 1721743 .. 1721753 +  -2.4  -3.63515   AACGCTCACGCCATT                 GAGG ATC CCGC                 TTATTCAAGATCGCA  48 400
CAP31_RS08845 1733392 .. 1733410 + -12.4  -3.05384   CGTTCGATGATGGGT             CTCGGGGC GGA GCCCTGAG             TTGACTGCGACGGGC  80 473
CAP31_RS08850 1734258 .. 1734273 +  -7.5  -3.16564   GATGGCGGGCATGAA              CGGGG GGGCAA CCCCG               TTCATGCCCTGGCCA  62 191
CAP31_RS08855 1736103 .. 1736114 +  -7.2  -2.57931   GGAGCGCCTAGCTAC                GGCG CTTG CGCC                 ATTCTCGGACGTACA  55 222
CAP31_RS08905 1748501 .. 1748511 +  -2.4  -4.46212   GTACAGGCCGCACAA                 CGCG GCG CGGG                 TTTTCTCATGGAGCC  61 276
CAP31_RS08940 1756229 .. 1756243 +  -4.2  -2.71022   AACATGCAATTCGTA               GGCGTA GAT TAGGCC               ATGTTTAATAATTTG  45 14
CAP31_RS08945 1757698 .. 1757710 +  -3.3  -2.55668   AGGAGCTCACCCTAA                GCAGT CTA ACCGC                GTTGATATCGAAGTG  42 46
CAP31_RS08950 1759177 .. 1759189 +  -4.1  -2.52543   CTGCGCAACGGCTGA                TCTTC GCA GAAGG                TGAGTTGCGCCCCGT  44 53
CAP31_RS08955 NONE
CAP31_RS08960 NONE
CAP31_RS08965 NONE
CAP31_RS08970 NONE
CAP31_RS08975 NONE
CAP31_RS08980 NONE
CAP31_RS08985 NONE
CAP31_RS08990 NONE
CAP31_RS08995 1765368 .. 1765387 +  -2.1  -3.37188   AAGCAGAAAAACAAG            TGCATCG AGAAAG CGATTCA             GTTTTTGCGGTGAAT  45 102
CAP31_RS09000 NONE
CAP31_RS09005 NONE
CAP31_RS09010 1771052 .. 1771068 +  -4.3  -3.54447   TCTTGGGCAGCATGA              CGACGGC TTA GCAGTTG              TATTTATGGAATCTG  53 106
CAP31_RS09015 1771637 .. 1771674 + -15.7   -2.8474   GAGGTCTCAACCTGC   TGGTGCCGGGCATG-TGC TCG GCATCGTGCTCGGCATCA   TGATTCTGCCTACCG  93 264
CAP31_RS09020 NONE
CAP31_RS09025 NONE
CAP31_RS09030 1773576 .. 1773603 +  -5.6   -5.4505   GGGCGAAGCTTGCGA        GGCGATATCTTA GTCG TGAGGTATGGCC         TTTTTTATTGAGCGA  85 42
CAP31_RS09035 1773996 .. 1774024 +  -4.5  -3.30554   GTCTGGCGGCTGCTG       CGGTGGCGGCAG CCGTGC CTGCTGAC-CCG        TTCATCATTGGTTCA  51 1
        arsA NONE
CAP31_RS09045 NONE
CAP31_RS09050 NONE
CAP31_RS09055 NONE
CAP31_RS09060 1779557 .. 1779577 + -11.1  -3.02946   GGGATTATCTCGGGA            TCCACGTGG ACG CCACGGGGA            ATTTATCCTTCACAA  75 73
CAP31_RS09065 1780132 .. 1780144 +  -3.4   -4.1552   ACGTAGGCATCAAGA                TGCT GTCCG AGCA                TTTGTTGAGCGAGTA  59 357
        mobB NONE
CAP31_RS09110 NONE
        moaD 1786450 .. 1786468 + -10.2  -2.63631   CGAAATTGCCTTCTT             TCCGCCCG TCA CGGGGGGA             TAGTATGCCAATTCG  71 4
CAP31_RS09120 1786931 .. 1786944 +  -3.8  -3.53343   GATATAAAGCAGCGT               CTGG ACTTGG CCAG                TTTCAGCACCCAATT  51 34
        mobA 1787828 .. 1787844 +  -7.9  -2.81547   GTCTGTCATGAGTCA              TGGGCGC GAT GCGCGCA              TCATTGATCTGGCCC  59 58
CAP31_RS09145 1790769 .. 1790783 +  -8.5  -2.62184   ACTATAATACATGGG               CGCGG GGATA CCGCG               TGGTATAGCAGCCCC  61 53
CAP31_RS09165 1794392 .. 1794405 +  -4.5  -3.35961   CCCTTAAATTTTAGC               TGCCG ATCC CGGTA                TTCATGCTTATTTCT  51 297
CAP31_RS09190 1800133 .. 1800162 +  -2.8  -2.98493   CGGCATTTCATAGGC       GGTTTGTCACCG CGTTGC CGGTCACCAATC        TGCTTTGCTAATGAC  42 308
CAP31_RS09200 NONE
CAP31_RS09205 NONE
CAP31_RS09210 1808275 .. 1808322 +  -5.6  -3.29459   CTGTAGTAGTCGCGA TCTGATCTGACAGTT-CCCCGGT TTG ACAGATGCAGCTGTCAGTTCAGA TTCAGTTGTTCAATG  54 64
CAP31_RS09235 1811666 .. 1811677 +  -2.2   -2.5789   TTGATCCAATAAGGC                GTTG TCGC CAGC                 CTTCATGCTCTTTCA  38 59
CAP31_RS09315 1825303 .. 1825331 +  -7.5  -5.72616   AGATGCACAAAAAAG        GTCGTATTCCT AAAAACA AGGGATACGGC        TTTTTTTATGTCCAT 100 484
CAP31_RS09325 1825756 .. 1825770 +  -4.2  -2.82505   TCTGCTGCGCGATCC               TTCAGC AAG GCGGAA               ATTTCGGTCTCACCT  46 54
CAP31_RS09345 1829384 .. 1829401 + -12.7  -4.68103   CGAACACATAAAAAA             GCGCCTC TGCG GAGGCGC              TTTTATTCGGCTTGA 100 48
CAP31_RS09390 1837475 .. 1837487 +  -3.3  -3.14564   CTGAGCATGACATAA                TCGTG CCG CTCGA                TTGATGGGGGAATGA  47 115
        mgtA NONE
CAP31_RS09400 1842388 .. 1842406 +    -8  -2.68072   CGGCCGACACGACCA             TGCCCGGC TCG GCCAGGCG             CTTGCTTATGGTACC  56 170
        aspA 1846638 .. 1846655 + -12.7  -3.66356   GCAGCCCGTAAAAAA             GCGGTGC ACTT GCACCGC              TTTCCGCTTGCCCGT  93 43
CAP31_RS09435 1848978 .. 1849007 +  -4.3  -3.03635   TATCCTGATCACTCA       GCCTGCCATTGACT CAG ACTCAATTGC-GGC       TGTTGCGCCAATTTC  47 33
        wrbA NONE
CAP31_RS09450 NONE
CAP31_RS09455 NONE
CAP31_RS09460 1853196 .. 1853211 +  -6.2  -2.97925   TTTGCCGCAGCACAC              TGCAAT CCTG ATTGCA               TATGTGATGTCAGAT  55 66
CAP31_RS09465 NONE
CAP31_RS09470 NONE
CAP31_RS09475 1855120 .. 1855138 + -13.2  -5.33405   TCACCCATAAATAAA             GCGGAACA TTG TGTTCCGC             TTTTTATTTGCTGGC 100 91
CAP31_RS09480 1857156 .. 1857200 + -21.8  -2.59431   CACTAACATGCCATA ACAATAAAAAACGGAACGCC TTACC GGCGTTCCGTTTTTTATTGG TCGATTGTCAGCAAA 100 123
        nadC 1861025 .. 1861052 +  -9.3  -3.07962   CACGGTAAAATCAGG        CGAAGCA-GGTA GCGGA TACCATGCTTCG        TATTCACCTGTCGCA  63 229
CAP31_RS09505 1863718 .. 1863731 +  -4.5  -2.73364   ACGCGTCAGCACTGC               CGCTG ACCG TAGCG                TAATTGCACTAAAAA  45 49
CAP31_RS09510 NONE
CAP31_RS09515 1867514 .. 1867527 +  -2.3   -4.3739   GGTACGCTGATACAT               CTGCA GGTA TGCCG                TTTTCTCCAGCGGTG  58 31
        moaA 1872790 .. 1872803 +  -8.1  -2.71888   ATTAAAGGCCGGGGG               CAGCC CGGC GGCTG                GTATCTTTCTTTTGC  61 232
CAP31_RS09565 1876842 .. 1876854 +    -2  -4.67552   TTGCCGTGATTGTCT                TTGA CGCAA TCAA                TTATTTTTTGCTGCG  63 127
CAP31_RS09585 1881263 .. 1881285 +  -3.4  -3.67141   TATGTAGTATAAAAT           CAGGTAAGTG ATT TAATTGCCTG           TTTAAATAACCTTAT  54 205
CAP31_RS09590 NONE
CAP31_RS09595 1885661 .. 1885676 +  -3.2  -4.08767   CCAGCATTGCTTTAA              TTCGTG ATAT CCCGAA               TTTTCCGGAAATGGC  56 19
CAP31_RS09610 1889203 .. 1889213 +  -6.8  -3.72695   CATGTCGAATCTTCC                 CGGT ACC ACCG                 TTTAATCGGCCAGCT  66 122
CAP31_RS09685 1900060 .. 1900070 +  -6.8  -2.93901   AAACTCACAGGAATC                 CGCA CCA TGCG                 TCTACTTCATACCAT  57 54
        gloA 1900828 .. 1900839 +  -3.6  -4.63527   TCGATTCCCGCCAAT                CGGG CGGC TCCG                 TTTTTGGCATGGTCG  69 401
CAP31_RS09700 NONE
CAP31_RS09705 1903574 .. 1903595 +  -6.5  -2.53715   CCCTTGAGTCCGTTG           GGGTAGCCG GACC CGTCTATCC            GTTCATGATGCTGCA  50 268
CAP31_RS09745 1914303 .. 1914330 +  -5.4  -3.92001   TGGTTTTGAATGAGG        GTACTGGCGGCT GACA ACCCGCCGGGGC         TTGTTATCTGCTATA  63 32
CAP31_RS09750 1915383 .. 1915396 +  -2.3  -4.19678   TTCGCTCAGCCGTTG               TCGCG CAGC TGCGG                TTTATTGAACTGTCA  58 61
CAP31_RS09760 1918010 .. 1918036 +  -2.2  -4.15006   TAACAAACTCCGATT         TCAACTGCATTG CAC CAATGCCGTCAA         TTTTACAGTCGATAT  56 86
CAP31_RS09770 1918669 .. 1918684 +    -4  -5.63517   GCTATACAAAGATTA              GC-TTCG AAA CGAAAGC              TTTTTTATTTAACCC  89 75
CAP31_RS09775 1919103 .. 1919131 + -17.6  -5.87996   CATAACGTCCGGGAA        GCAGTGCCAGAT ATTGA ATCTGGCACTGC        TTTTTTTATTCATTG 100 74
CAP31_RS09780 1919880 .. 1919905 + -11.3  -3.33696   CGTTCTCTTTGGTTA         CTTTCTCTTGG GCAA TCAAGAGAAAG          TTACTTGCCGCCAGG  79 249
        purU 1926499 .. 1926532 +  -9.6  -2.52896   TATCCGGAATGTTGC     GACGGCAGGAGAAA ACGCCG TTTCTCCTGCCGGA      TGAATTACACGCTGA  67 81
        mdoG NONE
CAP31_RS09835 NONE
CAP31_RS09840 1935725 .. 1935737 +  -3.4  -2.76422   CCCTTGCTGACACCC                CGTT CCCGA AACG                AATTTTTTCGCCATA  44 50
CAP31_RS09845 1936814 .. 1936827 +  -2.3  -4.13767   CTTCAACCACATCGC               CCTGA CTGA TCTGG                TTTTCCAGTAACAGG  56 519
CAP31_RS09860 1939005 .. 1939037 +  -8.3  -2.61695   GCTCAGCCCGCTCTC      GCCCAGCTGGTAGGC ACG GCCCATCAGATCGGC      CTGTTTGCGCATAGC  56 272
CAP31_RS09905 NONE
CAP31_RS09910 1952034 .. 1952050 +  -4.5  -3.30439   AGCAACTGTTTTCAG              GGTTATA GTT TATAATC              TTGCCTTTGCCTGTT  51 62
CAP31_RS09915 1953739 .. 1953752 +  -5.3  -3.53012   ATCCTGTCCCGTCAA               CCAAT CAGA ATTGG                TTTAAAGCCCCGCCA  56 110
CAP31_RS09920 1954599 .. 1954640 +  -5.1  -3.14564   CCTGACCATTATCAG TCCGTAATACGCGCGGC CCAGTTCT GCCGTGCCTGTTGCGCA  TTGCTGAACACCTGA  52 41
         psd 1965692 .. 1965719 +  -6.8  -2.77222   GCCACCCACTCACGC        GCCTGCGCCAGC GTAT GCACGCCCAGGC         CTTTCAGCTCGTCGT  51 515
CAP31_RS09980 1967511 .. 1967521 +  -5.4  -3.22475   CCTGCAACCGACACT                 CTTG GAC CAAG                 TATTGTGAGCCTGCC  54 7
CAP31_RS09985 NONE
CAP31_RS09990 1969588 .. 1969607 +   -15   -5.1287   ACCGGCATAAAAAAA            CCCGGCAC TTGC GTGCCGGG             TTTTTTACATCTCAA 100 71
CAP31_RS10000 NONE
CAP31_RS10005 1970420 .. 1970434 +  -2.9  -2.64726   GCCTTCCCTCATCCG               GATAT GAACA ATATC               ATTACTGTTATCAGG  41 170
CAP31_RS10010 1971143 .. 1971161 +  -3.1  -3.64703   ACCGGCGCGTCCCCA             TCAATGC TCTCC GCATAGA             TTTCGATGCGGACAG  50 228
CAP31_RS10025 1976405 .. 1976415 +  -3.2  -2.94032   TCCCTCCCCACCATC                 TCTC ACT GGGA                 CTTTGATTAACACAT  43 5
CAP31_RS10030 1978229 .. 1978242 +  -3.8  -5.14965   CGTGTTTAAATGAGG               TGCC CATAGT GGCA                TTTTTTGATGACCAT  77 446
CAP31_RS10040 1980294 .. 1980309 + -11.8  -4.59109   GGCATCAAACAAAAA              GGGCGC ACTA GCGCCC               TTTTTAACGGCTATC 100 51
CAP31_RS10045 NONE
CAP31_RS10050 NONE
CAP31_RS10055 1984199 .. 1984215 +  -5.1  -3.24166   AGAATCTGCGCCCCT              CACCACA GAT TCTGGTG              TTGACTTAGTTGCAT  52 184
CAP31_RS10060 1984986 .. 1985001 +  -7.6  -3.13522   TGTCCGAGTCAGGCG              CGAGTT GAGG AACTCG               TCTTCCTCCAGCCCT  57 376
CAP31_RS10070 1985892 .. 1985904 + -10.5  -2.76671   TGATGAGGGCCGAAC                GCGCG GGT CGCGC                CTTTGCGGTGGATGT  66 416
CAP31_RS10085 1989258 .. 1989294 +  -8.6  -3.39327   GATAATTTCGTGTTG   CGCTG-CGGGTGGCGGG TAGC CTTGCCAGCCGTCTGCG    TTATGGGTGTCCAAA  64 136
CAP31_RS10110 1993876 .. 1993907 + -12.5  -4.07885   CATATTGTGCTCCAC      TCAAAAAAGCACC TTTACT GGTGCTTTTTTGG       TTTTAACCGCCACTC  95 43
CAP31_RS10115 1995357 .. 1995369 +  -5.5  -4.07885   ATCTGCAGCTTTTGC                CGCCT GCA AGGTG                TTTTCCAGCAGCATC  64 89
CAP31_RS10125 1996381 .. 1996395 +  -3.6  -2.96235   CCCCGACCAAGTTTC               TTTGTT AAA AACAAG               TATACTTAGTGTATA  45 32
CAP31_RS10130 NONE
CAP31_RS10135 1996638 .. 1996664 + -11.7  -4.86621   ACCCCAAAAAATCAA        GCACCTAGCGCA TAAT TGC-CTAGGTGC         TTTTTAATTGCCAAT 100 35
CAP31_RS10140 1997041 .. 1997064 + -13.8  -3.89822   TCTGGCAATAAAAAA          CCCCCATGGC GTAA GCCCTGGGGG           TTTCTGGAATGGGTG 100 72
CAP31_RS10180 NONE
CAP31_RS10185 2006953 .. 2006987 + -21.8  -2.91264   CATTAATATGACAGA     CAATAAAAAAGGCGCT AAA AGCGCCTTTTTTATTG     TCTGTCACTCAGAAC 100 43
        typA 2010635 .. 2010660 + -11.1  -4.82678   ACGACAGCTTGACAA         GGTGGAATCGC GCGA GCGGCTCCACC          TTTTGCTTTTTCTAG 100 53
CAP31_RS10200 NONE
        rlmN NONE
CAP31_RS10210 NONE
CAP31_RS10215 NONE
CAP31_RS10220 NONE
CAP31_RS10225 NONE
CAP31_RS10230 NONE
CAP31_RS10235 NONE
        bamB 2018277 .. 2018301 + -15.9  -4.79451   GCAGTACCGCCATCA          GCAGGATATGA TAC TCATATCCTGC          TTTTCTATTTAGCAT 100 51
         der 2019971 .. 2020001 +  -6.1  -2.59267   CCAGAATTGAAAATT       CTGTTAGGCTTGA GCGAA TCGCGCCTAACCG       CTTCATGTCGTTCAA  53 251
CAP31_RS10250 2020763 .. 2020774 +  -7.2  -2.76291   CGCAAACAGTCGATA                CGGC AAAC GCCG                 TACATTTTCCGGTTC  56 80
CAP31_RS10265 2023867 .. 2023879 +  -6.2  -2.88737   TTATGCGTTGTACCG                GGCG CAGCA CGCC                ATTTCATCCTGATTA  54 1
CAP31_RS10270 NONE
CAP31_RS10275 NONE
CAP31_RS10280 2025700 .. 2025710 +    -4  -3.92592   ATAGTCACCGCGCCA                 TTCA TCA TGAA                 TTTCATGTTGCCGGT  58 517
CAP31_RS10325 NONE
        feoB 2041190 .. 2041208 +  -3.9  -3.22858   ACGAACGGAATCGCG            CCA-CGAT AGAT ATCGGTGG             TCTTGATATCCTTGG  48 494
CAP31_RS10355 NONE
CAP31_RS10360 2045818 .. 2045829 +  -5.8  -3.61178   CCAGCTGTCCATTTT                GACG GTGT CGTC                 TTTAAACTGGATCGG  58 472
CAP31_RS10370 2049240 .. 2049253 +  -2.3  -4.33274   ATTAAGCAGATCGGC               TGCGG TGAT CGGCA                TTTTGGTCGTGTAGA  60 501
CAP31_RS10380 NONE
CAP31_RS10385 NONE
CAP31_RS10390 2051272 .. 2051297 + -16.3   -5.1971   ACGAGACAAAAAAAA         CGGCTATTTCC ATAC GGAAATAGCCG          TTTTTAATTTTTAAT 100 61
CAP31_RS10460 2062329 .. 2062339 +  -2.4   -2.9834   AACTTGTCCGACAAA                 CCGG TTG CAGG                 TATGCTTATCGTCAT  42 42
CAP31_RS10465 NONE
CAP31_RS10470 2064361 .. 2064379 +    -3  -3.45037   GAACAATTACTATCC             CCTCCAAT TTC AATGGTGG             TATTCTCATTTTTCA  47 42
CAP31_RS10475 2065538 .. 2065555 + -12.7  -5.60689   GTACCAAATAAAAAA             GCCGCAG CTTA CTGCGGC              TTTTTTATTGTCTGA 100 50
CAP31_RS10530 2076438 .. 2076450 +  -3.3  -2.84504   TTTTACGCGCAGCCT                TGCGC CAA GCTCA                TGCTATTTAAGGACT  44 3
CAP31_RS10535 2077589 .. 2077605 +  -6.6  -3.05384   CAACAAAATCATCAA              GCTGTT ATTGG AACAGC              TTAAATAGGCAGCAA  55 1
CAP31_RS10540 NONE
CAP31_RS10545 NONE
CAP31_RS10550 2079501 .. 2079523 +  -9.1  -2.89881   AGGCAATTAAACCCC           ATGCCTCGC TTTTC GCGAGGCAC           TCTCTACCATAACTG  65 31
CAP31_RS10555 NONE
CAP31_RS10560 NONE
CAP31_RS10565 NONE
CAP31_RS10570 NONE
CAP31_RS10575 NONE
CAP31_RS10580 2084931 .. 2084955 +  -3.5  -4.59069   AAACCGAATATTTCC          TTTTGCGCATC ACG GGTGCGTAACG          TTTTATCCTTCTGCT  69 287
CAP31_RS10590 2086334 .. 2086355 +  -5.7  -2.72344   GCTTAACTTGCTGAT           GGCGCTGTC GGGC GACCGCGAC            TAATTGCAACTACGG  49 1
CAP31_RS10645 2099442 .. 2099461 +  -3.5   -3.7829   GTGAGCGACAGTGAT            CCCGG CCGGGGTAAA CCGGG             TTTCATCAATCTGCT  55 435
CAP31_RS10660 NONE
CAP31_RS10665 NONE
CAP31_RS10670 NONE
CAP31_RS10675 NONE
CAP31_RS10680 2107987 .. 2108000 +  -2.4  -4.10161   GATAGGTAATCGCAG               TCTG TTCCAT CAGA                TTTTCGCGGGTGATC  56 503
CAP31_RS10725 2117491 .. 2117510 + -10.8  -4.56775   TGAATCCTGATGCGA            TCCAGTCA AATC TGACTGGA             TTTTTCGGGGCAGAT  93 50
CAP31_RS10730 2120915 .. 2120931 +  -2.9  -4.34285   TGAAATTTGCCAGTA              TCGGTTA AAA TGCCCGA              TTATTTATTTACCTA  60 143
         efp 2121576 .. 2121589 +  -8.1  -5.79595   TTAATCGGTAGCAAA               GCAGC TTCG GCTGC                TTTTTTATTTTCAAG 100 74
CAP31_RS10740 NONE
        moaD 2123050 .. 2123066 +  -9.3  -3.06183   GAAGTCGCCATCTTC              CCGCCGG TGA CCGGAGG              TTAAATGAAAATCGC  67 5
CAP31_RS10750 2123551 .. 2123575 +  -5.1  -3.52177   ACTCGGCGGTCAGCG         TCTGCAGCAT CTGCGC ATGCTGC-GA          TTCCATTTTTTCAAA  54 41
CAP31_RS10760 2124433 .. 2124450 +  -9.8  -2.95539   ATCCGCAGGCACGCG             CCCGGC TTGTCT GCCGGG              GTTTACTTGAACTTG  70 46
CAP31_RS10775 2126805 .. 2126815 +  -2.4  -4.08767   CGGCGCGTCTGACTG                 CCGG TAA CGGG                 TTTTGGCGGCATAAG  56 202
CAP31_RS10805 2131068 .. 2131088 +   -14  -4.19953   ACAAATAATAAAAAA            GGCGCGGA TAAAC TCCGCGCC            TTTTAAAGTTCAGTA 100 118
CAP31_RS10815 NONE
        clpA 2134158 .. 2134206 + -11.5  -4.12532   GATCATTTTCAAAAA CACCTGAATATGTCATGCTGTAGT AAAA ACTACA-CATGACATA-TC-GGTG TTTGTCTGTCAAAAA  89 59
        rfbB NONE
        rfbA NONE
        rfbC NONE
        rfbD 2138043 .. 2138066 +  -6.6  -3.74224   GGGTTTCCACAGTCT          GCCTGGCGTT GCTC ATCGCCACGC           TTTCCGTGATTTCCA  63 390
CAP31_RS10865 NONE
CAP31_RS10870 NONE
CAP31_RS10875 2143658 .. 2143670 +  -6.2  -3.01712   GCCGCAACCGCCGGT                CGGC GGTAG GCCG                TATTCCAGCGCACGG  51 130
CAP31_RS10890 2146543 .. 2146556 +  -8.1  -2.64293   ACGGTAATGCGTTAA               CCGTG CCCG CACGG                CTGTTCTCTTGCAAA  61 34
CAP31_RS10895 2147956 .. 2147971 +  -2.4  -3.72695   CGTTGCGCACCGAGC              ACGCGC CACA GTGCGG               TTTCCTGCGCACGCT  51 341
CAP31_RS10910 2151770 .. 2151788 +  -5.2  -2.53747   CGACTGAAGCACACT             CCTTGAGG TGA CCTGGAGG             CTGTTATGAAGCTTC  47 310
CAP31_RS10915 NONE
CAP31_RS10920 2153589 .. 2153608 +  -8.5  -3.78902   ACTGGTTTGATTATT            GCCGCCG AATAGC TGGCGGC             TTTGCCTGTTGGTTG  69 63
CAP31_RS10935 NONE
CAP31_RS10940 NONE
CAP31_RS10945 NONE
         ppx NONE
CAP31_RS10955 NONE
CAP31_RS10960 2161226 .. 2161242 +  -4.3  -4.14243   TCCAGATCGCCTGTT              TTGGCCG AGG CAGCCAG              TTTTGCCGTCGCATC  61 360
CAP31_RS10975 NONE
CAP31_RS10980 NONE
CAP31_RS10985 NONE
CAP31_RS10990 2166529 .. 2166547 + -12.4  -5.96219   CGCAGCCGCAAAAAA             GCCCAGGT CAT GCCTGGGC             TTTTTTTTATCAGTG 100 47
CAP31_RS11000 NONE
CAP31_RS11005 NONE
CAP31_RS11010 NONE
CAP31_RS11015 2172378 .. 2172419 +  -2.2  -4.71426   ACAATACCTTGGTAA TTGCCTCCAGCTGTGCGA TGCCGC TTTCCTGGCTGGAGGTGA  TTTTATTGATCAGCC  69 353
CAP31_RS11060 NONE
CAP31_RS11065 NONE
CAP31_RS11070 NONE
CAP31_RS11075 2185314 .. 2185331 +  -4.1  -4.25283   AAACGCAGTATTATG             TTTTGCC AGTC GGCAGGA              TTTTCATCACAGCAT  63 200
CAP31_RS11085 2187335 .. 2187353 +  -5.8  -2.91264   TGATGACCTTCGGAT             ACCCGGTC ATC GCCCGGGA             TGTCTGCATCCCGGC  51 83
CAP31_RS11095 2191223 .. 2191247 +  -9.3  -2.62184   GTATCCACCGCAACC          GCCGCGGTT TGCGGGT AATCGCGGC          TGGTATGCAGCCCGC  59 64
CAP31_RS11150 NONE
CAP31_RS11155 2206817 .. 2206831 +  -4.2  -4.27316   CTTTATTGGCCAGGG               CCGG ATGATCG CCGG               TTTTGAATTCAAGCA  65 429
CAP31_RS11200 2212387 .. 2212429 +  -7.8  -2.77899   GCCGTAGAAGGATTT TGGCGCA-GCATCGTTGCCG TCGCC CGGCA-CTATGCCTGCGGCA TCATTGATCGCCAGG  54 344
CAP31_RS11295 NONE
CAP31_RS11300 NONE
CAP31_RS11305 2228990 .. 2229008 +  -3.8  -3.40403   GAATTGCATCATAAC             CGTGCC CAAACGA GGCATG             TTATAGTAAACAGAA  49 81
CAP31_RS11310 2230042 .. 2230058 +  -2.2  -3.54543   CCGGTCATGTGGCCC              CAGGTA TCGTT TACCCG              TTTGAAAAGGTCGAT  48 398
        cphA NONE
        cphA 2239620 .. 2239652 + -12.9  -2.54325   TCAGCACACTCCATA     CCCACCC-TGAAAC ATTAAA GTTTCATGGGTGGG      ATATCTTTAACAACC  80 47
CAP31_RS11345 NONE
CAP31_RS11350 2241868 .. 2241896 + -18.9  -5.02074   ACCCGGCGCAAAAAA        GCCCTTGCCAGTC ACA GACCGGCAAGGGC        TTTTTTGAACAATCC 100 157
CAP31_RS11360 2243929 .. 2243940 +  -5.8  -3.17075   TCAGGCGGGTGCGCA                GCAC AATA GTGC                 TTGACTTGCAGCGGC  54 41
CAP31_RS11365 NONE
CAP31_RS11370 NONE
CAP31_RS11375 NONE
CAP31_RS11380 NONE
CAP31_RS11385 NONE
        hypA NONE
        hypB 2250543 .. 2250563 +  -3.2  -3.62046   ATGGCTTCGCGCTTG            CTTGCACC CATAC GCTGCAGG            TTATTGGCGAACTCC  50 309
CAP31_RS11425 2258894 .. 2258919 +  -2.5  -2.68071   AGATGCGCATCAAAT         CGTGTTCATTG ACGT CTATGAACGAG          TCGATTTGACTTAAC  38 132
CAP31_RS11465 2265568 .. 2265587 +    -2  -2.65521   AATCCGGTCACATCT            GCATCCCG CAGT CGGAATGG             GTTGGTTCATATCAA  39 39
CAP31_RS11470 NONE
CAP31_RS11475 NONE
CAP31_RS11480 NONE
CAP31_RS11485 NONE
CAP31_RS11490 2270870 .. 2270884 +  -4.2  -3.79519   GTAACGGAGAATTAT               TGCCAT GGT AAGGCA               TTTGCTGATCGCATT  56 15
CAP31_RS11495 NONE
CAP31_RS11500 NONE
CAP31_RS11505 2276992 .. 2277013 +  -7.3  -3.14344   GGCAATGGCAACGAA           TGTCATCCG ATCA CTGATGACA            TTCATCGAAACCATG  59 9
CAP31_RS11540 NONE
CAP31_RS11545 2283291 .. 2283301 +  -6.8  -3.25823   CGGTACTGAAATTGG                 TCCG CCA CGGA                 TTGATATCCAGGCCG  56 63
        glyA NONE
CAP31_RS11570 NONE
        ribD NONE
CAP31_RS11580 2289624 .. 2289635 +  -3.6  -4.77165   TAACCCCCAGCAATT                TGGC CGCA GCCG                 TTTTGTTATAGCGCG  72 148
        rplU NONE
CAP31_RS11605 2294616 .. 2294636 + -15.5  -4.67038   TGGCAACACACTCAA            GCCCTATCC TGC GGATAGGGC            TTTTACTTTTCAGCA 100 47
        obgE NONE
CAP31_RS11615 2296872 .. 2296899 +  -3.4  -4.35524   ATCGCGACAATCTGG        TGGC-GCTGTCTT CCT GATACAGCCGCCG        TTTTCAGTTTCCGGC  62 9
CAP31_RS11630 2300086 .. 2300098 +  -4.7   -4.1822   GCCTCAAGCACACTT                CCGGC AAT GCCGA                TTTCTTCAAGTAGCG  64 0
CAP31_RS11635 2300664 .. 2300679 + -11.8  -4.85599   TCCGGGCAATAAAAA              GCCGGG CAAG CCCGGC               TTTTTATCACATCAC 100 46
CAP31_RS11645 2304389 .. 2304415 +  -2.2  -2.71731   CTGTGAAGCTTTGGT         TTTTGCTGATGT TAA GCATCAGCGCAC         TGGTTACCGGGTGCG  39 77
CAP31_RS11650 NONE
CAP31_RS11655 2305925 .. 2305946 + -14.5  -4.57073   CGCTGCAATAAAAAA           GGGCAGATC CGCG GATCTGCCC            TTTTTAACAGCGATA 100 66
         map NONE
CAP31_RS11685 2311478 .. 2311488 +  -5.4    -3.182   GCAACTCGAGACTGA                 CTTG CTG CAAG                 TGTTAAATCTTTAAA  54 1
         ffs NONE
CAP31_RS11735 NONE
CAP31_RS11740 NONE
CAP31_RS11745 NONE
CAP31_RS11750 2325003 .. 2325033 + -11.1  -4.05629   CTCAAACATACCCTG       CTGTGGCTGCGGT CAAAA ACCGCCGCTGCAG       TTATTTCCATTTAAT  89 93
CAP31_RS11755 2326171 .. 2326183 +  -9.1  -3.14132   TGGGGCCTGGATTCA                TGCCG ATC CGGCA                TTGCTGCACGAAGAA  63 147
CAP31_RS11880 NONE
CAP31_RS11885 NONE
CAP31_RS11890 2356978 .. 2357023 +  -3.7  -3.08991   AGGAAATGAGCGCTG CCGG-CCGGGCTGGCATAGCGC ACA GCGAGTTTCCAGCCCTCTCCGG ATTTCTTCCAGACGT  46 94
CAP31_RS11905 NONE
CAP31_RS11910 2362223 .. 2362237 +  -7.1  -3.56594   TCACCACGACCACCG               TCGGC CCCAC GCCGA               TTTCCCAGCCTTTGG  60 261
CAP31_RS11950 NONE
CAP31_RS11955 NONE
CAP31_RS11960 2370706 .. 2370761 +  -5.4  -3.66178   GCCGCTTTCAATAGG CTTCATACCTCGCGCC-TGTACTCTGT GGA GTGCAGTACAAGGCGCGAGTTGCGCAG TTTGGCATTCCAAAC  61 42
CAP31_RS11965 NONE
CAP31_RS11970 NONE
CAP31_RS11975 NONE
CAP31_RS11980 NONE
CAP31_RS11985 2379128 .. 2379145 +  -6.9  -2.57795   AGCGCTCTGTCGGCT             TGCGCGG CGGA CGGCGCA              TCACTTCATCGTCAG  55 460
CAP31_RS11995 2381467 .. 2381481 +  -2.9  -4.75309   TGACATCCTTAAAGA               TGTAT ATACA ATACA               TTTTATTGGGTTTGC  69 63
CAP31_RS12000 NONE
CAP31_RS12005 2382550 .. 2382575 +  -4.7  -3.49475   GGTCATCGAAACTGT         TGCC-GCCGG ATTTAGG CTGGCTGGCA         TTCTGTGCCGGTGCA  52 148
CAP31_RS12020 NONE
CAP31_RS12025 2390702 .. 2390738 + -19.8  -2.90486   GATGCAGGATGCGGT    CATAAAAAAAGCCGAG CTAAA CTCGGCTTTTTTTATG    TCTCTGAGAATTATT 100 101
CAP31_RS12330 NONE
CAP31_RS12335 2436788 .. 2436802 +  -4.2  -3.56092   GTATCGCTGGCCTTC               GATGTC ACA GACAGC               TTTGCCGGCTCGTGC  54 400
CAP31_RS12375 NONE
CAP31_RS12380 NONE
CAP31_RS12385 2445921 .. 2445933 +  -9.1  -3.62597   ATGGCACGACGATGA                CGCTG ACA CAGCG                TTATTAAGAAATCCC  72 6
CAP31_RS12405 NONE
CAP31_RS12410 NONE
        mreD NONE
        mrdA NONE
CAP31_RS12425 NONE
CAP31_RS12430 2455685 .. 2455695 +  -2.4  -3.52919   CCGCATGAACTTAAA                 ACCG GTT CGGG                 TTGTCCTTAAATAGT  47 1
CAP31_RS12435 NONE
CAP31_RS12440 NONE
CAP31_RS12445 NONE
        lipA 2459062 .. 2459094 + -13.3  -2.52464   TGACATCAAACGAGA      CGGTGCCACTTGCGC CAG GCGCAAGCGGCCCGG      TGAATTCCCAGACGA  75 360
CAP31_RS12485 NONE
CAP31_RS12490 NONE
CAP31_RS12495 NONE
CAP31_RS12500 2476041 .. 2476052 +  -7.2  -2.71791   TTATGGACATCTGCT                GCGC TTAA GCGC                 CTTTGCAAACAGCCT  55 85
CAP31_RS12505 2477067 .. 2477079 +  -4.1  -2.94924   ATAGAGTAAAACAAA                GCAAT CCA GTTGC                ATTTATCGATAGAAA  47 206
CAP31_RS12545 2486201 .. 2486211 +  -8.2  -2.87132   GTGCTCCGGTAAACA                 GGGC GAT GCCC                 TCTATCACCGGCACG  57 221
CAP31_RS12570 NONE
CAP31_RS12575 2493261 .. 2493273 +  -4.7  -3.66178   CAATGGCTGGAAAAA                CTGCC CGT GGCCG                TTTAAACTTCAGGCA  59 8
CAP31_RS12600 NONE
CAP31_RS12605 NONE
CAP31_RS12610 NONE
CAP31_RS12615 2500838 .. 2500858 +  -2.5  -4.15044   GACCGAACAACGCAC            TGGCGCA ATTCTGC TCCGCCA            TTTCTTAGAGACGCA  55 175
CAP31_RS12685 2517530 .. 2517551 + -10.9  -3.25823   TATGTGTCTGAACAC           CGGCGGTAA ATGG TTATCGCCG            TTAGTATGAGAAGAG  77 50
CAP31_RS12690 2518250 .. 2518276 + -11.5  -3.72576   CTTGGGTTCCATCGC         CAGCGCGCGGG CGATC CCTACGCGCTG         TTTCATACCGCCGGA  80 445
CAP31_RS12710 2523223 .. 2523233 +  -8.2  -3.29947   TCATCCAGTGGCGGG                 CCGG CCG CCGG                 TTACTATAATGAATA  67 66
CAP31_RS12715 NONE
CAP31_RS12720 2526716 .. 2526737 + -13.1  -3.07962   CGCAAAATGGCAACA           TGCTGATGC AGCT GCATCAGCA            TGTTGCCCTCTGCGG  82 62
CAP31_RS12725 2527743 .. 2527757 +  -8.6  -3.61517   CTTGTTGGCCGCATC               CATCAG CGC CTGATG               TTCTTCAAAACGGAT  66 234
CAP31_RS12800 2543333 .. 2543343 +    -4  -3.06265   TTTATCTTATTAAAA                 TTTG GTA CAAA                 TATACTTTCTGCGCT  47 49
        soxX NONE
        soxY NONE
        soxZ 2544739 .. 2544764 + -11.9   -2.7736   GATATTCAGAAAACC         ACACCGGAGAA TGCA TTCTCCGGTGC          TGATTGCATATAACT  77 39
        soxA 2545647 .. 2545669 + -14.2  -5.65177   CTACGTAAAAAATAA           CGGCGAGGAT AAT ATCCTTGCCG           TTTTTTTATAGATGT 100 49
        soxB 2547520 .. 2547574 + -13.1  -4.23213   TTTAAAATATTGCGT TATACCCGATAGGCAAAAAGGTCAC CACAA GTGGCCTTTTTGTTTATCAGGTGAA TTTATTGCGTATCCG  95 36
CAP31_RS12830 2550252 .. 2550280 + -16.8  -3.33696   TAAACCCAAATCAAA       CGCGCGCCGGGTA ACAA TACC-GGCGCGCG        TTAATTGAGGAGCAA 100 38
CAP31_RS12835 2552456 .. 2552466 +  -4.6  -4.56597   CATATCGACATCCGT                 TCCC GGC GGGG                 TTTTTGCCCGCAAGC  71 515
CAP31_RS12850 NONE
        thiS NONE
CAP31_RS12860 NONE
CAP31_RS12865 NONE
CAP31_RS12870 2558213 .. 2558223 +  -8.2  -3.86194   TCGCACACGATCACC                 CGCG CAC CGCG                 TTTCTGAAACAGCTT  69 177
CAP31_RS12890 2563642 .. 2563660 +  -2.3  -2.78414   CGATACCGCAGAGGC             GGTGGCA GTCGA TGCCGCG             TAAATTTCTGTTTGC  40 4
CAP31_RS12895 NONE
CAP31_RS12900 2565551 .. 2565570 +  -5.6  -2.60392   AGATTGTCCTGAATA            GCGCAACT TATC GGTAGCGC             ATTGCTTAAAAGGTA  49 92
CAP31_RS12905 2567243 .. 2567268 +  -7.5  -3.63805   TCGTCATGCAGATTC         GCATTGGCGCG TAAC CGTGGCGATGC          TTTCGCCTGTGCGCT  63 502
CAP31_RS12920 NONE
CAP31_RS12925 NONE
CAP31_RS12930 NONE
CAP31_RS12935 2570067 .. 2570077 +  -5.4  -3.32647   GGTTATGCAGACCAT                 TCAG CAC CTGA                 TTGATCTGCTTCGGC  52 133
CAP31_RS12945 NONE
CAP31_RS12950 2573389 .. 2573428 +  -8.7  -3.02511   TGAAACCAGCGGCCA  TGCTGCGGCACGATGG CGTGCACAT CCATC-TGCCGCACCA  TGTTGACCCAGTAGC  61 134
CAP31_RS12960 NONE
CAP31_RS12965 NONE
        phoU 2576441 .. 2576463 +  -4.9  -4.19238   CAGCCTGCGGCTCGA          CATCCAGCGC GATC GTGCTG-ATG           TTTTCCCCTTCCAGC  61 201
CAP31_RS12985 NONE
CAP31_RS12990 2585051 .. 2585109 +  -5.6  -5.00616   CCTTGAAAATACGCT G-TCTC-GCCCCTATTATTAGCACTCCTC GGGC GAG-AGTGCTAATAATACGGCCCGAGCTC TTTTTTGGCAGCGCA  80 199
CAP31_RS12995 NONE
        groL 2587202 .. 2587220 +  -9.5  -5.56673   TCGGTAACAACAGAA             CCCCGTC CTTGT GGCGGGG             TTTTTTATTCTGGGT 100 65
        mgtE NONE
CAP31_RS13010 NONE
        msbA NONE
CAP31_RS13020 2592670 .. 2592689 + -12.2  -5.24129   TTAACTCATAAAAAA            CGACAGGA AAAA TCCTGTCG             TTTTTTATCACGAAC 100 78
CAP31_RS13040 NONE
CAP31_RS13045 NONE
        epsE NONE
        epsF NONE
CAP31_RS13060 NONE
        xrtB NONE
        epsI NONE
CAP31_RS13075 2604391 .. 2604420 +  -8.5  -2.57988   CTGTCAGATTCATGC       GCAGCCGTACCTG ATAT CAGCTGCAGCTGC        TCGATTGATGCATTT  61 12
CAP31_RS13080 NONE
CAP31_RS13085 2606789 .. 2606802 +  -2.4  -2.96499   CGATTTTCATTAAGA               GCAT AAATCG ATGC                GTATTTTAATTTTCT  42 67
CAP31_RS13090 NONE
CAP31_RS13095 NONE
CAP31_RS13100 NONE
CAP31_RS13105 NONE
CAP31_RS13110 NONE
CAP31_RS13115 NONE
CAP31_RS13120 NONE
CAP31_RS13125 2617043 .. 2617065 +  -6.2  -2.66272   ATGCGCCTGCGCAAG           CGCTGTCG TGGCTGC CGGCGGCG           TGGATTTGCATAGGC  53 42
CAP31_RS13130 NONE
CAP31_RS13135 2618532 .. 2618553 +  -2.9  -4.91511   TCCTTTTGCCGCGCT           TCTGCCG TCAATATC CGGCTGA            TTTTTATCCTGGCGT  74 143
CAP31_RS13220 2634274 .. 2634290 +  -6.5  -2.72991   AAATCAGACTCACCT              CGGCC GTGATCA GGCCG              TCCTTGCCGGTCTCG  51 355
CAP31_RS13295 2645947 .. 2645960 +  -9.5  -2.52464   ATTCTGATCTACCGC               CGGCG CGTT CGCCG                TCCCTTGCGCACCCG  62 100
CAP31_RS13305 2648774 .. 2648788 +  -2.7  -4.19506   CTCTGAACATTCAAG               CGCCG CAGCA CGGCC               TTTTCCGCTTCCACT  56 266
CAP31_RS13375 NONE
CAP31_RS13380 2665468 .. 2665478 +  -3.2  -3.10611   ATCATAGTGGCCGAC                 GCAT TCC GTGC                 ATTTATTGGGATCGA  43 162
CAP31_RS13410 NONE
        ftsE NONE
CAP31_RS13420 2672148 .. 2672176 +  -7.5  -2.57132   ATGGAACTTTCCGAC        ATTAGCACTCTCT GAA ATAGAGTGCTAAA        ATTATCGCAAAGGAG  58 48
CAP31_RS13425 2673073 .. 2673113 + -19.4  -2.76696   CACCTCAGCCTTTAC T-CCAAATAAAAACCCCGC TCTG GCGGGGTTTTTATTTGGCA  ATTCTTGAGAGCAAC 100 44
CAP31_RS13535 NONE
CAP31_RS13540 2697013 .. 2697034 +  -4.3  -5.03314   GCATCATGAAATCCA           GGCGCTTGCC GAC GGC-GCCGCC           TTTTTTCAGAATCCC  81 227
CAP31_RS13550 NONE
CAP31_RS13555 NONE
CAP31_RS13560 NONE
        rdgB NONE
CAP31_RS13570 NONE
CAP31_RS13575 2702941 .. 2702964 + -13.8  -3.89822   TCTGGCAATAAAAAA          CCCCCATGGC GTAA GCCCTGGGGG           TTTCTGGAATGGGTG 100 72
CAP31_RS13610 NONE
CAP31_RS13615 2713712 .. 2713727 + -10.4  -5.14563   CCCCGCATAAAAAAA              GGAGGC CTCG GCCTCC               TTTTTTACTCAAGCC 100 31
CAP31_RS13640 NONE
CAP31_RS13645 2717455 .. 2717476 +  -8.1  -2.71011   TGCACGATGCGGCGG           GCTGCAT-CA TCG TGCATGCAGC           TGATTCAAACAGGGT  61 48
        dacB 2720247 .. 2720258 +  -7.2  -3.67646   TCTGGCAGGCAAATT                CCCG GCAG CGGG                 TTGTGATTATTTCTT  66 193
CAP31_RS13665 2720818 .. 2720854 + -12.3  -2.50994   CTGATAACGCAATCC    ATGCCGACGGGAAAACG GTT CGTTTTTCTGCCGGCAG    CTTCATGAAGTTAAA  78 37
CAP31_RS13670 2721711 .. 2721725 +  -4.2  -3.38435   GAATAAACTCCTATA               TCCTAG CTG CTCGGA               ATTTGTTTTCACCAC  51 87
CAP31_RS13675 2722708 .. 2722724 +  -4.3  -3.32023   GCATTTCGCCCGGGC              CGGAGCG CAC CACTTCG              TATTCATTCTGTCCG  49 284
CAP31_RS13690 NONE
CAP31_RS13695 NONE
CAP31_RS13700 2726070 .. 2726088 +  -3.1  -2.85351   GCAGCACGATGAAAC             TTCCTGC ATCCG GCAGCAA             TCTGGTATGCCAGGC  41 186
CAP31_RS13745 2735310 .. 2735324 +  -5.6  -3.53224   TGGATAATAAATAAT               CACTGC GCT GCAGCG               TTTGGAGGCCACATC  58 91
CAP31_RS13750 2737312 .. 2737348 +   -13  -2.54841   CATAAACACTCATCA    ACCGGATTTCAGCGGC CGCGA GCGGCTGGAATCCGGG    CTATTACTTGCCGTT  80 36
CAP31_RS13785 2745547 .. 2745557 +  -3.2  -3.35679   GAACGCTGGCTGGCA                 CCTA ATC TGGG                 TTATGAATAAGCGGG  47 5
CAP31_RS13790 NONE
CAP31_RS13795 NONE
         alr 2748943 .. 2748992 + -12.3  -5.00616   GATCACGAATAATTT ACCCATAAAAAAGGCGTTCCG TTTTTATC CGGAACGCCTTTTTTACAGGC TTTTTTACAGGAGCA 100 29
CAP31_RS13810 2749789 .. 2749801 +  -4.7  -2.74144   GGTTCGACTCCAGTC                GGGCG CAC CACCC                CTTTCCACATCCCGC  47 16
CAP31_RS13815 2750203 .. 2750218 +  -2.6  -2.52676   AGGCGCTTCACGCAC              TCCA-CT TTA AGCTGGA              TACATTCGCAACATG  40 16
CAP31_RS13820 2750940 .. 2750958 + -14.6    -5.055   TTTGGAATGGAAAAA             GGGCACTC AGC GAGTGCCC             TTTTTTACAGCTTGC 100 72
CAP31_RS13840 NONE
CAP31_RS13845 NONE
CAP31_RS13850 NONE
CAP31_RS13855 2757198 .. 2757218 +  -2.6  -3.01565   AATTAACTGAATAAA           CTGGA-GTA ATCA TGCATCCAG            ATTTGATCTTATTTC  43 27
CAP31_RS13860 2757976 .. 2758004 +    -6  -3.40403   CCCAGGCTACAGCAT       CATAGACATCGGC ATCC GCCGGCG-CTATG        TTATAGTCGCCGAAC  56 328
CAP31_RS13880 2761696 .. 2761719 + -13.8  -3.89822   TCTGGCAATAAAAAA          CCCCCATGGC GTAA GCCCTGGGGG           TTTCTGGAATGGGTG 100 72
CAP31_RS13915 2769141 .. 2769153 +  -4.1  -3.53091   GCACAGCGATACCAC                TGCGT CAG ACGTA                TTTCGCCGCAAAAAT  50 463
CAP31_RS13935 2772045 .. 2772076 +    -8   -5.4593   CCATCACCATTAAAC      CGCA-CGGCGGCAAA TTC TTTGCCGCCTATCCG      TTTTTGTTATTTTCC 100 28
CAP31_RS13940 NONE
        tilS NONE
CAP31_RS13950 2774427 .. 2774444 +  -9.9  -5.00616   ATGGGCGAAAAAAAA             GCACAAC CGCA GTTGTGC              TTTTTTAGCAGGCAG 100 43
CAP31_RS13980 2782187 .. 2782224 +  -2.6  -4.00756   TCAGCACGCCCGGAT   GGTGACTGGGTTTGCG GGAGCA CTCAAAACCGGTCGGC    TTGTTTAATACAATA  54 504
CAP31_RS14000 NONE
CAP31_RS14005 2785850 .. 2785882 + -10.5  -3.86346   CATATTCTAATCAAC      CCGCACGGCAACGGC CTC GCTGTTGTCGTGCAA      TTTCTCCAGCAATCG  84 31
CAP31_RS14020 NONE
CAP31_RS14025 2789114 .. 2789124 +  -3.2  -2.79183   CAAGATGGTCGCACT                 GGCA GCA TGTC                 TATCATAAAGGTACG  42 7
CAP31_RS14030 NONE
CAP31_RS14035 2791048 .. 2791064 +  -4.3  -4.58395   AATAATAGATATCCC              CGCCAGC GAA GCTGATG              TTTTTAAAAGATCAC  71 260
CAP31_RS14070 2801833 .. 2801849 +  -3.5  -3.85698   ACCGGCTTGCGCACT              CCGCCTC ACC GTGCCGG              TTTGTGCAACGACGC  56 102
CAP31_RS14075 2803327 .. 2803348 + -14.5  -2.81178   ACATTATGGCTTGCC           GGGGTAAGC AGCC GCTTACCCC            ATTTCCAATTACTTG  87 46
CAP31_RS14080 2804446 .. 2804477 +  -9.4  -3.10715   TCATCGCTAACATCC      CGCTGGCGGATTCG GCCC TGAATCTGCCGGCC       TTCCCTGCTCATCGC  67 31
CAP31_RS14105 2806668 .. 2806678 +  -6.8  -4.25658   TATTCCGTTATCAGG                 CTCG CAT CGAG                 TTGTTTTAATGGCCT  74 6
CAP31_RS14110 2807527 .. 2807545 + -10.3  -4.42062   GTTTCATTTATCCAC             CGCAAGC GGGGA GCTTGCG             TTTATTTCAGGAATC  93 338
CAP31_RS14115 2809401 .. 2809432 +  -8.6  -3.53012   ATAAGTTGATCCAGG      GTTCCGGGTGGC AATGACAC GCCACCCGGCCC       TTTAACCACCAGGAG  69 37
CAP31_RS14120 NONE
        cobO NONE
CAP31_RS14130 NONE
        bluB NONE
CAP31_RS14140 NONE
CAP31_RS14145 NONE
CAP31_RS14150 NONE
CAP31_RS14155 2816952 .. 2816968 +  -2.3  -3.98236   TTCCTGTCGGATTAA              CATATAA TTT TTCTATG              TTTGTGCTGGCGTTT  54 503
CAP31_RS14195 2822705 .. 2822727 +  -2.7  -3.45324   CCGGTGTCGAAGTGT          GGCTGGCA GATTTGCA TGCC-GCC           TATTTCCTGCCAATA  48 428
CAP31_RS14205 NONE
CAP31_RS14210 NONE
CAP31_RS14215 2825357 .. 2825375 +  -5.2  -3.53811   AAATACACTGCGTGC             TGGCCAGT GCC GCTGGCGA             TTTCCAGCACGTGGC  54 498
CAP31_RS14240 2829190 .. 2829202 +  -7.7  -2.55392   AACACCTTTTCTGCA                TCCTG AAT CAGGA                TCGATTCGGTCAATT  53 381
CAP31_RS14275 NONE
CAP31_RS14280 2839102 .. 2839149 +  -5.6  -3.29459   GTGTAGTAGTCGCGA TCTGATCTGACAGTT-CCCCGGT TTG ACAGATGCAGCTGTCAGTTCAGA TTCAGTTGTTCAATG  54 520
CAP31_RS14300 2843026 .. 2843036 +    -4   -4.7078   ACAGGAGGCGGTGAA                 CAAT GGC ATTG                 TTTTTGAATACTTCA  69 243
CAP31_RS14305 2844402 .. 2844414 +  -3.3  -2.63257   TACTACAACTAATGC                GACCG ATG CTGTC                TGGCTTGTCTGCGGT  43 97
CAP31_RS14310 NONE
CAP31_RS14315 NONE
CAP31_RS14320 NONE
CAP31_RS14325 NONE
CAP31_RS14330 2847937 .. 2847951 +  -5.6  -3.14863   TTGACATCTGCGATA               GCCGAA CTA TACGGC               TTGCATACATTTTTT  54 135
CAP31_RS14350 NONE
CAP31_RS14355 NONE
        aroQ NONE
        accB NONE
        accC NONE
CAP31_RS14375 NONE
CAP31_RS14380 2858967 .. 2858984 +  -9.9  -5.33785   AATCAACAATAAAAA             GGCAATC CGAA GATTGCC              TTTTTTGTAGTAGTT 100 29
CAP31_RS14385 2860298 .. 2860310 +  -4.1   -3.6707   CAACTGCCTCAGCGA                GTTCA GCC TGAGC                TTTAGCATATTCCAT  52 175
CAP31_RS14480 NONE
        rnpA NONE
CAP31_RS14470 NONE
CAP31_RS14465 NONE
CAP31_RS14460 2872926 .. 2872955 - -15.3  -4.20106   AAAGTTGATTTAAAA       TTCTCAATGTTTC ACGT GAAACATTGAGAA        TTGCTTAAAAAATAG 100 138
CAP31_RS14455 2870897 .. 2870911 -  -2.8  -2.72947   GATCGATCAGATAAT               GCATCA TGC TTATGC               GACCGATTTGCGGCG  41 20
CAP31_RS14450 NONE
CAP31_RS14445 NONE
CAP31_RS14440 NONE
CAP31_RS14435 2867198 .. 2867218 -  -6.8  -3.64541   GCACGAAATTAAACA            GCCAAGAC CCATC GCCTCGGC            AATTAATCCGAGATA  63 110
CAP31_RS14430 NONE
CAP31_RS14425 NONE
CAP31_RS14420 NONE
CAP31_RS14415 NONE
CAP31_RS14410 NONE
CAP31_RS14405 2862998 .. 2863014 -  -5.2  -2.53876   CTTTACCTGAAGCCA              TGATTG TTATC CAATCA              ATAAACGGCTGAGGA  47 23
CAP31_RS14400 2862140 .. 2862154 -  -3.4  -3.76411   TCAAAATTACTTAAA               CGGCCG CAG CACCCG               CTACGATCTCGGAGA  54 6
        atpD NONE
CAP31_RS14390 2860150 .. 2860197 -  -5.6  -3.29459   CATTGAACAACTGAA TCTGAACTGACAGCTGCATCTGT CAA ACCGGGG-AACTGTCAGATCAGA TCGCGACTACTACAC  54 70
CAP31_RS14345 NONE
        glmU NONE
        glmS 2848041 .. 2848089 -    -6  -3.57144   TTTGCCACGTGCAAA GGGGACAAACCTCGGTAGCAGGC GAAT GCCGGCTAT-GAAATCTACCCCC TTCAATTTACGACTT  58 180
CAP31_RS14295 NONE
CAP31_RS14290 2840453 .. 2840486 - -22.7  -3.53012   TGTCTGTTTTCGAAA     TCCGCGAATGTCACT TATA AGTGACATTCGCGGA      TTTCGAAATGTTCAA 100 143
CAP31_RS14285 2839048 .. 2839058 -  -8.2  -3.79678   AATGCCCGATAACAA                 CCCG ATG CGGG                 CATTAATGCTTCTAG  72 118
        lipA NONE
        gcvT NONE
        gcvH NONE
CAP31_RS14255 NONE
CAP31_RS14250 2831467 .. 2831485 -  -8.1  -3.48276   TTTGGCTTGATACAA             CGCGTGG TTGAC CCACGCA             AAAAAAGCATCTATC  69 486
CAP31_RS14245 2828569 .. 2828606 - -11.5   -3.6543   CAAGTCCGGAAAATA   GCGTATCTCTGGCATAAT GGC ATCATGCC-GACATACGC   AGTTAAACAGGAAAA  82 248
CAP31_RS14235 2827120 .. 2827134 -  -5.6  -4.02424   ATTAATCAGCAGAAA               GCGCCT AAT ATGCGC               CCCATACATAGAACA  66 15
CAP31_RS14230 2826361 .. 2826381 - -14.7  -3.65529   ACACCGCCATGGAAA            CGGGCGCCT TGC AGACGCCCG            CTTGCAGCAGATACC  95 48
CAP31_RS14225 NONE
CAP31_RS14220 2824660 .. 2824674 -  -4.2  -3.58365   TATCAGACGATAGAA               TTCTGC ATC GCCGAA               AAAATCGCGGTATTT  54 227
CAP31_RS14200 2822059 .. 2822106 -  -4.2  -3.29511   GGGACTGGCGCAGAA GCAACGCTTTGTCCGGCCGC-TGC TTGC GCTCGCGGCCAG-CA--GCGCTGC AGTCGGCGTGGCTTT  49 377
        cobT 2820529 .. 2820540 -  -4.4  -3.06384   CGAAAAACACAACGA                TGGT TCAC ACCA                 CTCCGTATCCGGCCG  47 128
CAP31_RS14185 2819747 .. 2819758 -  -3.6  -2.64616   TCGGTAGTCATAGCA                GGGC CACC ACCC                 CCATATAAAACACGG  43 6
CAP31_RS14180 NONE
CAP31_RS14175 NONE
CAP31_RS14170 NONE
CAP31_RS14165 2817218 .. 2817238 -  -5.5   -3.5913   GTTAAATACTAAAGA            TACGAGT GAATCGT ACTCGTA            TTGATGCAGTGGTAC  58 92
CAP31_RS14160 2816067 .. 2816091 -  -6.3  -3.09933   TGGCAAGTCATCGAA          GCGCCGCTG AATCTGG CCGCGGCAC          TGCAAATTCACGCCC  52 509
CAP31_RS14100 NONE
CAP31_RS14095 NONE
        ssrS 2805467 .. 2805481 -  -2.8  -4.57569   GTATTGCTTTAAAAA               TTGGGT TTT ACACAA               ACATGAGCCGACAAG  65 106
CAP31_RS14085 2804844 .. 2804856 -  -3.3  -4.11371   TAATATTGCTTAAAA                CCGCC CAA AACGG                TGCAGACCCTGCTCG  59 7
CAP31_RS14065 NONE
CAP31_RS14060 NONE
CAP31_RS14055 2793502 .. 2793523 - -15.9  -5.01732   AATTCCTTGAAAAAA           CCGGAACCC GAAC GGGTTCCGG            TCGATTGCCAGCCTG 100 42
CAP31_RS14050 NONE
CAP31_RS14045 NONE
CAP31_RS14040 2790453 .. 2790468 -  -4.6  -3.40403   CGGCCTGCAGCAGAA              CTGGCT GCTG AGCCTG               TGGGTGATCCCGGTG  52 389
CAP31_RS14015 NONE
CAP31_RS14010 2785850 .. 2785882 - -10.5   -2.6175   CATATTCTAATCAAC      CCGCACGGCAACGGC CTC GCTGTTGTCGTGCAA      TTTCTCCAGCAATCG  71 43
CAP31_RS13995 NONE
CAP31_RS13990 NONE
CAP31_RS13985 2781474 .. 2781487 -  -6.7  -4.28994   GACCACTGACGAAAA               CGATG CCAT CATCG                TTCATGCCACCATCG  71 243
CAP31_RS13975 NONE
CAP31_RS13970 2778418 .. 2778442 -  -2.1  -3.87869   GCAAGCGCGCATAAA         CGATGC-GGC TAGAAT GCCAGAATCG          TGGGAATATATTGTG  53 9
CAP31_RS13965 NONE
CAP31_RS13960 2775515 .. 2775533 -  -2.4  -2.74598   GGATAAATTATATCA             TGACGTTG GTC CAACATGA             GACCTTTGCATGAGG  39 84
CAP31_RS13955 2774427 .. 2774444 -  -9.9  -5.75945   ATGGGCGAAAAAAAA             GCACAAC CGCA GTTGTGC              TTTTTTAGCAGGCAG 100 45
CAP31_RS13930 NONE
CAP31_RS13925 2769708 .. 2769727 - -12.2  -5.89947   GAAAGGCAAAAAAAA            CCCGAGTA ATCA TACTCGGG             TTTGAAATCCTCTTA 100 171
CAP31_RS13920 2768596 .. 2768608 -  -9.1  -3.05596   CATGGCGTGACCGAA                GCGGA CAT TCCGC                GCATCGTTGCCAATA  63 101
CAP31_RS13910 NONE
CAP31_RS13905 2765357 .. 2765373 - -10.9  -2.60244   GCTCTAACCAACTGA              GCTACAG ACC CTGTAGC              AGGATCTAGTCGTGT  73 139
CAP31_RS13900 NONE
CAP31_RS13895 2765074 .. 2765114 - -11.1  -3.83205   AGCTTTCACACTAAA  GCGTGAGGTCTGACGCGTC TTC AACGCGGCACACCTGACAC  TTCAAGTCAGGCTAC  86 119
CAP31_RS13890 NONE
         rrf 2761696 .. 2761719 - -13.8   -5.4505   TCTGGCAATAAAAAA          CCCCCATGGC GTAA GCCCTGGGGG           TTTCTGGAATGGGTG 100 40
CAP31_RS13875 NONE
CAP31_RS13870 NONE
         xth 2757324 .. 2757350 -    -8  -4.13767   TCGTCGATGGCAAAA         CCTCTGTCGCCA ATC TGGCAAAAAAGG         TGTTCTGGGTCAGTG  73 352
CAP31_RS13835 NONE
CAP31_RS13830 NONE
CAP31_RS13825 2750940 .. 2750958 - -14.6  -4.74103   TTTGGAATGGAAAAA             GGGCACTC AGC GAGTGCCC             TTTTTTACAGCTTGC 100 57
CAP31_RS13805 2748944 .. 2748991 - -20.2  -2.67696   ATCACGAATAATTTA CCCATAAAAAAGGCGTTCCG TTTTTATC CGGAACGCCTTTTTTACAGG CTTTTTTACAGGAGC 100 48
CAP31_RS13780 2741205 .. 2741226 -  -3.7  -3.31558   AAATTATTACAGCAA           TCCGGCC-AT GGC ATAGGCCGCA           ACCCGCTCATGCATG  49 32
CAP31_RS13775 NONE
CAP31_RS13770 NONE
CAP31_RS13765 NONE
CAP31_RS13760 NONE
CAP31_RS13755 2737313 .. 2737347 -   -15   -3.2404   ATAAACACTCATCAA     CCGGATTTCAGCGGCC GCG AGCGGCTGGAATCCGG     GCTATTACTTGCCGT 100 30
CAP31_RS13740 NONE
CAP31_RS13735 NONE
CAP31_RS13730 NONE
CAP31_RS13725 NONE
CAP31_RS13720 2729312 .. 2729327 -  -3.2  -3.25595   GGAAAATTAAAAGTA              CTCCCC TGTC AGGAAG               CTGAGGCGATTATGC  45 285
CAP31_RS13715 2728093 .. 2728112 - -13.6  -5.92337   AGACACGAAAAAAAA            CAGGCGAC CGGA GTCGCCTG             TTCAAGCTTCCTAAA 100 68
CAP31_RS13710 NONE
CAP31_RS13705 2725682 .. 2725694 -  -5.5  -3.59979   GTGCGGGACGGCAAA                TGGCA GAA CGCCA                TTTCCATGGGCCTGT  56 246
CAP31_RS13685 2722996 .. 2723006 -  -2.4   -3.0439   AGCCATTATAAATCA                 TCCG AGG CGGC                 GGCTTGCGCGGCTTT  42 5
CAP31_RS13680 2722148 .. 2722174 -  -7.3  -3.23853   GTGCCGCAACCAATA        TCACTCATGGCG ACAA CGCCACG-GCGA         CCGCCATTGCCATTA  59 302
CAP31_RS13655 NONE
CAP31_RS13650 2717268 .. 2717283 -  -4.8  -4.20531   GACACCGATCCAAAA              GTATTT ACCA AAATAC               ACCTGCACTTCATTG  65 223
CAP31_RS13635 NONE
CAP31_RS13630 2715243 .. 2715262 -   -15  -5.56673   ACGGACAACAAAAAA            GCCGCCCA GTTC TGGGCGGC             TTTTTTAGCGAAACA 100 45
CAP31_RS13625 2714118 .. 2714128 -    -4  -2.72263   ACACTCCTTGTAAAT                 CTAA AAT TTAG                 TCGTTCATTATGTAC  45 57
CAP31_RS13620 2713712 .. 2713727 - -10.4  -5.60993   CCCCGCATAAAAAAA              GGAGGC CTCG GCCTCC               TTTTTTACTCAAGCC 100 47
CAP31_RS13605 2709775 .. 2709790 -    -4   -3.6003   GAAATCATTTGTAAA              GCTTTA TTTA CAAAGC               CAGATAATTTACTTT  53 174
CAP31_RS13600 2707831 .. 2707847 - -10.9  -2.60244   GCTCTAACCAACTGA              GCTACAG ACC CTGTAGC              AGGATCTAGTCGTGT  73 139
CAP31_RS13595 NONE
CAP31_RS13590 2707548 .. 2707588 - -11.1  -3.83205   AGCTTTCACACTAAA  GCGTGAGGTCTGACGCGTC TTC AACGCGGCACACCTGACAC  TTCAAGTCAGGCTAC  86 119
CAP31_RS13585 2704662 .. 2704681 -  -7.2  -3.74077   GCCTACACACTTAAA            CCAACTAT TCCA ACAGTTGG             CTGAGTTAACCTTCT  66 274
         rrf 2702941 .. 2702964 - -13.8   -5.4505   TCTGGCAATAAAAAA          CCCCCATGGC GTAA GCCCTGGGGG           TTTCTGGAATGGGTG 100 40
CAP31_RS13545 2696473 .. 2696484 -  -3.6  -2.75349   AAGGCGGAAAATCCA                GCCA GCGT CGGC                 TTTGGCGCGACAGTC  43 414
CAP31_RS13530 NONE
CAP31_RS13525 2695052 .. 2695063 -  -2.2  -3.36327   CGAGTTCAGGCATAA                CGTG ACAT CACA                 GATCAGGTACGACCG  45 28
CAP31_RS13520 2692917 .. 2692929 -  -4.7  -2.96007   AATCAAAATGAATTA                CTGCG ATG CGCCG                CGGTTATCCTTGTTG  50 10
CAP31_RS13515 NONE
CAP31_RS13510 2688803 .. 2688823 -  -6.9  -3.82097   TGCAAAGGGATTAAA            CCAGCTA TTCGTGT TAGCTGG            CATGGGAATGGTAAC  66 488
CAP31_RS13505 2687588 .. 2687607 -  -4.2  -3.17212   TCACCACTGCATCAA            TGCCGGCA CTAC TGTCAGCA             GTGATGACTCGCATC  49 44
CAP31_RS13500 NONE
CAP31_RS13495 NONE
CAP31_RS13490 NONE
CAP31_RS13485 NONE
CAP31_RS13480 NONE
CAP31_RS13475 NONE
CAP31_RS13470 2681616 .. 2681643 -  -2.7  -5.27923   TAAGTCTATAAAAAA        GGGAATATGCT TAATCG AGCATTTTACC         CGCGTCAATATGCCG  79 116
        ccoN NONE
        ccoO NONE
CAP31_RS13455 NONE
        ccoP 2678173 .. 2678191 - -13.1  -4.27316   CTCCGCAATGCAAAA             CCCCCGC ACAGA GCGGGGG             CTTTGACGTTCAGCA  95 70
        ccoG NONE
CAP31_RS13440 2675933 .. 2675944 -  -2.2  -2.82142   GTTATAGTCAAGAAT                GCGT TTTG ACAC                 TCACGTCGCGGTCTG  40 6
CAP31_RS13435 NONE
        ccoS 2673079 .. 2673106 - -17.2  -3.60098   AGCCTTTACTCCAAA        TAAAAACCCCGC TCTG GCGGGGTTTTTA         TTTGGCAATTCTTGA 100 208
CAP31_RS13405 NONE
CAP31_RS13400 NONE
        rsmD NONE
CAP31_RS13390 NONE
CAP31_RS13385 2665291 .. 2665330 -  -9.5  -2.94695   TCAGCATGAACGAGA TAGCCGATCTGCG--CGCA TGGC TGCAAACACAGATCGGCTA  AAGCACCGCGATCAG  70 37
CAP31_RS13370 2662662 .. 2662672 -  -6.8  -2.81966   CCAAATGCCACCACA                 GTGC ACA GCAC                 AAAAATAAATTTGCG  56 46
CAP31_RS13365 2660827 .. 2660849 -  -3.4  -2.87146   TCTGCGCACAATAAG           TTCATGGCTG TGG CATCGATGAA           TTACGACTGTCCAAT  44 4
CAP31_RS13360 NONE
CAP31_RS13355 NONE
CAP31_RS13350 NONE
CAP31_RS13345 NONE
CAP31_RS13340 NONE
CAP31_RS13335 NONE
CAP31_RS13330 NONE
CAP31_RS13325 NONE
CAP31_RS13320 NONE
CAP31_RS13315 2648742 .. 2648754 -  -3.3  -3.37796   CCGCATTATCGATAA                TCGCC GAA GGCTA                CATGCTCTGAACATT  49 23
CAP31_RS13310 2648492 .. 2648508 -  -4.4  -3.10012   AATTCGATCAGTGAA              GCTGCT GCTAT AACAGC              AAACCGCCCGCCGCG  47 16
CAP31_RS13300 2645444 .. 2645464 -  -6.7  -3.59262   CTCGACACGCTCAAA            CAGGCCGGC GCT GCCGCCGTG            GTGCCTGAGGTTCTC  60 430
CAP31_RS13290 NONE
CAP31_RS13285 NONE
        lptC NONE
        lptA NONE
        lptB NONE
CAP31_RS13265 NONE
        raiA NONE
CAP31_RS13255 NONE
CAP31_RS13250 NONE
CAP31_RS13245 NONE
CAP31_RS13240 NONE
CAP31_RS13235 NONE
CAP31_RS13230 2634616 .. 2634652 -  -2.9  -2.73875   GCCGGTCGAACATCA   GGGGCAGGC-TGCGTT TGAACC AGCTCATGCCTGTCCC    CAGCGCGCCATCAGT  41 13
CAP31_RS13225 2633951 .. 2633968 -  -9.9  -2.74523   CCACGCTGAACAGCA             GATCGCT GTCA AGCGATC              CAAGTAACACGGGGA  68 59
CAP31_RS13215 NONE
CAP31_RS13210 NONE
CAP31_RS13205 NONE
CAP31_RS13200 2630433 .. 2630452 - -12.2  -3.30173   AAAAATAGATCAATA            CGCTGCAA TTCA TTGCAGCG             CTGCTCAATCACATC  85 43
CAP31_RS13195 2627947 .. 2627957 -  -2.4  -3.79747   GTATGGAGCAGCAAA                 GCCG CTC CGGT                 TAATCATGGGAAAAC  50 104
CAP31_RS13190 NONE
CAP31_RS13185 NONE
CAP31_RS13180 2626147 .. 2626185 -  -5.3  -2.70932   GGCGGTGCGTAAGCA   TGCTGTCAGTATAACCA GTATT CGGTTACACGAACAGCC   GGCAGAACCGCTAGT  47 36
CAP31_RS13175 2625843 .. 2625853 -  -2.4  -2.92668   GATCAGGCAAGGACA                 GGCG GAG CGCG                 GGAATGGTAAGGGCA  40 2
CAP31_RS13170 NONE
CAP31_RS13165 NONE
CAP31_RS13160 2622705 .. 2622718 -  -5.3  -2.61322   ATACCCGGGAAACAG               CAATG AATT CATTG                TTTCGGCACAACAAA  47 20
CAP31_RS13155 2621403 .. 2621417 -  -8.5  -4.68908   GGCAGGCAAAACAAA               GGGGC CTGAC GCCCC               GGGTATTGAAGAAAG  84 55
CAP31_RS13150 NONE
CAP31_RS13145 2619350 .. 2619386 -    -3  -4.03995   CCCTTCACAAAAAGA   CGCATGACGTGGCCGAT CGAA AACGACAA-ATCATGCG    CTATTCATTGCACCA  56 79
        epsD 2617950 .. 2617994 -  -5.5  -3.19602   TGGGGGATAGGAATA CGCTCGCTCGACTTTACCG GCTTTAG CGGCCACGTCATGCGCGCG ACCTCCGTCGCACCC  50 481
CAP31_RS13035 2593744 .. 2593758 -  -4.4  -3.55173   ATGACAACACGATAA               TATTAA AAA TTAATA               AGCCTGACTGTCCTT  53 20
CAP31_RS13030 2593304 .. 2593325 - -14.5  -5.96894   AGCCAAACAAAAAAA           GGGTAGCGT ATCA ACGCTACCC            CCAGAGAAAGTTTGC 100 55
CAP31_RS13025 2592670 .. 2592689 - -12.2  -5.31456   TTAACTCATAAAAAA            CGACAGGA AAAA TCCTGTCG             TTTTTTATCACGAAC 100 60
CAP31_RS12980 2578958 .. 2578969 -  -3.6  -2.75708   CCCGCTGAAAAAATG                CCGC CAGC ACGG                 ATTCTAGCGTTTCAA  43 29
CAP31_RS12975 2576156 .. 2576171 -    -9  -2.74196   CCAAAGCCATAGAAC              GCATGG GCGA CCATGC               CAAAAACATGTCTGA  60 125
CAP31_RS12955 2573010 .. 2573024 -    -7  -4.58466   GCGACAACGAGAAAA               CGCAGC ATC GCGGCG               GAGAAGTGCATCCCA  76 278
CAP31_RS12940 2569964 .. 2569974 -  -4.6   -2.8352   GTTTAATGTAACAAG                 CCGC CAC GCGA                 ACTGATCGCTGTAAT  46 2
CAP31_RS12915 NONE
CAP31_RS12910 2566791 .. 2566806 -  -3.9   -5.4833   TCACCCAATAAAAAA              CCCGC GTAACA GCGAG               TTTTTTATTGGGTGC  85 59
CAP31_RS12885 NONE
CAP31_RS12880 2559747 .. 2559779 - -15.8  -4.86385   AGGCTGAAAAACAAA     CAGCCGCC-TATTCA ATGG TGAATAAGGCGGCTG      TAAGGAATCCGTTTC 100 80
CAP31_RS12875 2557809 .. 2557825 -  -3.5  -2.53822   TGTATTCGACAATAT              CCCGCTC ACC GCGCTGG              CTTTGACGCAAGGCG  41 289
CAP31_RS12845 2554397 .. 2554410 -  -5.9  -3.67597   CGGCTTATTTAATAA               GGGAG TAAG CCCCC                ATTTGGCAATCCCGC  61 193
CAP31_RS12840 2551564 .. 2551584 -  -2.6  -5.60993   TCCGGCAGAAAAAAA           CGAC-T-GGC TGC GCCTAAGTCG           TCTGGTCGGGATAAA  86 483
        moaC 2541359 .. 2541378 -  -4.4  -5.26247   CCAAAACAAATAAAA            CT-GTAACA ATG TGTTACGAG            GCAAGCCAGTGCCCC  79 19
CAP31_RS12790 NONE
CAP31_RS12785 2540349 .. 2540362 -  -4.5  -5.37043   AGTCTAGACAAAAAA               CCGGA AATA TCCAG                CCTGAGCCGCCATGT  83 68
CAP31_RS12780 2539971 .. 2539993 -  -4.9  -3.32521   AGTATATTTGCATAA           TTTTGGTGC ACCCG GCACTAAAA           TCGCACCAAACGAAG  54 79
CAP31_RS12775 NONE
CAP31_RS12770 NONE
        cobA 2535348 .. 2535363 -  -3.9  -2.72866   CACAGTACAAAGGGA              GCCGC GCCGTT GCAGC               CTGCTTGTGCTGATG  43 71
CAP31_RS12760 NONE
        nirD NONE
CAP31_RS12750 NONE
CAP31_RS12745 2531152 .. 2531186 -  -7.2   -3.3579   AAATTGTTTCAAATA    TGCCGT-CACCCGCCG TCAAT CCG-GGGTGTACGGCA    TGACTTGTTTGATCC  61 6
CAP31_RS12740 NONE
CAP31_RS12735 NONE
CAP31_RS12730 2527541 .. 2527555 -  -8.5  -3.96148   GCCCGCTAGCAGAAA               CGGGC AATCA GCCCG               CCGGCGGCAGCGCCT  74 18
CAP31_RS12705 NONE
        ntrB NONE
CAP31_RS12695 2517529 .. 2517552 -  -5.2  -3.02144   TTATGTGTCTGAACA          CCGGCGGTAA ATGG TTATCGCCGT           TAGTATGAGAAGAGG  50 390
CAP31_RS12680 2515526 .. 2515568 -  -2.8  -3.86897   TGCAGTTTCCATAAA TCATGACTCGTATAGTTG TTTTATC CAACTATACTCGCGATGA ATTTAATGTCAACTA  54 88
CAP31_RS12675 NONE
CAP31_RS12670 NONE
CAP31_RS12665 NONE
        casA NONE
        casB NONE
       cas7e NONE
       cas5e NONE
       cas6e 2505943 .. 2505959 -  -2.2  -2.94099   TTTTTGCATTACAGA              TGCGAT GCAGT ATCGCC              CATGCCGATTTTAAA  42 148
CAP31_RS12635 NONE
CAP31_RS12630 NONE
CAP31_RS12625 2504413 .. 2504427 -  -5.7  -3.61398   GTGCGTTTTCAAGAA               CGATG ACCAG CATCG               CCCAGGCTTTCAGGA  58 4
CAP31_RS12620 2504075 .. 2504085 -  -5.4  -3.38281   CCAGCTAAAATTCAA                 CGAT GGA ATCG                 TTGCTGAATTTTACG  56 69
CAP31_RS12595 2495973 .. 2495989 -  -3.5  -2.71483   ATATTTCCCCAATCA              GCGCGGG CAA CTGGCGC              CGGCAAAATATTTAT  43 6
CAP31_RS12590 NONE
CAP31_RS12585 NONE
CAP31_RS12580 2493261 .. 2493273 -  -4.7  -4.58283   CAATGGCTGGAAAAA                CTGCC CGT GGCCG                TTTAAACTTCAGGCA  72 27
CAP31_RS12565 NONE
CAP31_RS12560 NONE
CAP31_RS12555 NONE
CAP31_RS12550 2485568 .. 2485581 -  -2.4  -3.57144   CGCTTTATCGGCAAA               TGCA GTCCGG TGCA                TTTTTTCTGGGGGGC  48 466
CAP31_RS12540 NONE
        egtD 2482456 .. 2482471 -  -6.8  -4.24948   CCACTATAGTCAAAA              CCGGCA GTTA TGCCAG               TTTTTCAAAACGCCA  74 215
CAP31_RS12530 2481748 .. 2481772 -  -3.5  -4.05193   TACCAAACAGAACAA          TTTCAGCAATG CCT CATCGCTGGAG          AATGCCCCCGATTCT  59 221
CAP31_RS12525 2480801 .. 2480813 -  -3.3  -2.71731   TGTACCTTCGAATCA                TGAGG AAG CCTCC                ATGTGCGCTGTCTCG  43 10
CAP31_RS12520 NONE
CAP31_RS12515 NONE
CAP31_RS12510 2477067 .. 2477079 -  -3.4  -4.76191   ATAGAGTAAAACAAA                GCAA TCCAG TTGC                ATTTATCGATAGAAA  71 90
CAP31_RS12480 NONE
CAP31_RS12475 NONE
CAP31_RS12470 NONE
CAP31_RS12465 2467500 .. 2467531 -  -6.5  -4.41353   GGAGAGAGACGAAAA      TTCCC-CGGCGCGA ACCCG CCACGCCGAGGGGA      ATCACTACGGGTTGA  75 30
CAP31_RS12460 NONE
CAP31_RS12455 2458655 .. 2458667 -  -9.1  -3.07443   GGACATGGGATTCAA                GCACG CCG CGTGC                GGGCCTATGGTGCGC  63 394
CAP31_RS12400 NONE
CAP31_RS12395 NONE
CAP31_RS12390 2445732 .. 2445750 -  -8.8  -2.76037   ACCGCAAAGGACAAC             GCGGCGCA ATT TACACCGC             CAACGGCAGCATTGG  60 225
         xth NONE
CAP31_RS12365 NONE
CAP31_RS12360 NONE
CAP31_RS12355 NONE
CAP31_RS12350 NONE
CAP31_RS12345 NONE
CAP31_RS12340 2436424 .. 2436459 -  -6.1  -3.12936   ACTGAAACGGCAACA    CCGGCAGGATGAGTG TGCGGC CATTCATCCTGTCGC     GATTCGCATGACCTA  57 38
CAP31_RS12325 2433779 .. 2433809 -  -2.7  -4.29326   GTTAAATCCAACAAA      GCACACACTGAAATC AAC GATTTC-GTGC-CGC      CAATAATCAACTTTG  60 194
CAP31_RS12320 NONE
CAP31_RS12315 2431486 .. 2431516 -  -2.6  -4.49337   GTATAACCCAGAAAA      TCGGCACGGTTCT AAACCG ATAACCG-GCCAA       TCGCCTGGATACGCG  62 6
CAP31_RS12310 NONE
CAP31_RS12305 NONE
CAP31_RS12300 NONE
CAP31_RS12295 NONE
        lolB NONE
CAP31_RS12285 2426306 .. 2426319 -  -3.7  -3.17194   ACTTGCGCAACGCAA               GCCTG CAAA CCGGC                TTACTTCGCTAAATC  47 26
CAP31_RS12280 2426150 .. 2426182 - -17.3  -5.37345   CTCAAGGACAAAAAA      TAAAAGCGTGTAACG ACA CATTACACGCTTTTA      TTTTATCACTATAAG 100 53
CAP31_RS12275 2425116 .. 2425133 -  -9.9  -2.77148   GCGATGAACACATGA             TGGATGC TTGC GCATCCA              CCGAAAAATCACTCC  69 34
CAP31_RS12270 NONE
CAP31_RS12265 NONE
        ychF 2422721 .. 2422748 -  -4.9  -4.09739   GGAACCCCTCCAAAA        CAAGCCAAACA TTATCT TATATGGCTTG         AATTTTGTCAAACAT  64 33
CAP31_RS12255 2422624 .. 2422634 -  -3.2  -2.77936   AACATCATACACAAC                 CCAA ATT CTGG                 TGGAGGGGGAAGGAT  42 23
CAP31_RS12250 2422465 .. 2422476 -  -3.6  -3.90082   TACCAAACTACCAAA                GCCC ATTA GAGC                 AAAGTAACTGGAGCG  56 33
CAP31_RS12245 NONE
         tuf 2421060 .. 2421111 - -16.8  -5.14563   TGGCCTATTAAAAAA CATATCGGGCTTGCTTGCAAGAGAC CTC GCCTCTCGCAAGCAACCCCGA-ACA TTGCTTCAATTACTC 100 35
CAP31_RS12235 NONE
CAP31_RS12230 NONE
CAP31_RS12225 2420039 .. 2420057 -  -4.6  -3.21276   CTTCCTGCTACAACA             TCAGGT TTTTTCC ACCTGA             CCAAAATCCAATTCA  49 7
        rplK NONE
CAP31_RS12215 2418649 .. 2418668 - -13.6  -3.64703   GCGTTGGGAGTGAAA            TTCCCGGC AATT GCCGGGAA             CAACAGATTAAATTT  93 159
CAP31_RS12210 2417956 .. 2417974 -  -3.1  -3.06528   AAAGTAAAAATATCA             CAACACA ATTAA CGTGCTG             TCGGGTTTATGCTGC  43 32
CAP31_RS12205 2417457 .. 2417488 -  -3.7  -4.73682   GCGCAGAAGACAAAA      GACAACGG-ACAGC TGAAT GTTGCACCGCTGTC      TTATGTTTTCTGCAT  71 79
        rpoB 2413319 .. 2413341 -  -8.4   -3.1372   GAGGCGCGAGCAACA           GAGGGGCG CGCCAAT CACCCCTC           ATCGCATCAATAACG  65 32
        rpoC 2409031 .. 2409056 -  -4.8  -3.87737   CATAAACACTAACAA         TTACCGAC AGAATCCAAA GTCGGTAA          AAAAGACGATGGATT  61 63
CAP31_RS12190 2408548 .. 2408560 -  -3.3  -4.49337   CAACACCAATTAAAA                GCCAA AAT TAGGC                TTTCTTAGGCCGTTT  65 20
CAP31_RS12185 NONE
        fusA NONE
         tuf 2404591 .. 2404619 - -13.9  -3.48024   GCGGAGCATCAAATA        CGAAAGGGCGGAA TTA TACCGCCCTTTCA        GGTTTATGGCAAGTA  93 45
CAP31_RS12170 NONE
CAP31_RS12165 NONE
CAP31_RS12160 NONE
CAP31_RS12155 2402577 .. 2402587 -  -2.4  -2.75481   GTTTAACTTTAATCA                 GTGC CAT GCTC                 TACTCCTACTGGCCA  39 31
CAP31_RS12150 NONE
CAP31_RS12145 NONE
CAP31_RS12140 NONE
CAP31_RS12135 NONE
CAP31_RS12130 NONE
CAP31_RS12125 NONE
CAP31_RS12120 2399511 .. 2399528 -  -5.6  -3.47447   CAAAAAAGTATAACA             GCACTT AATTAA AAGTGC              AAGATATTATACTGC  56 32
CAP31_RS12115 NONE
CAP31_RS12110 2398711 .. 2398724 -  -6.7  -2.61144   GCACCCCTTAAATAT               CAACG ACTT CGTTG                GTCGATTTGTAGACG  53 4
CAP31_RS12105 NONE
CAP31_RS12100 NONE
        rpsH NONE
CAP31_RS12090 NONE
CAP31_RS12085 NONE
CAP31_RS12080 NONE
CAP31_RS12075 NONE
CAP31_RS12070 NONE
CAP31_RS12065 NONE
CAP31_RS12060 NONE
CAP31_RS12055 2393608 .. 2393622 -  -3.6  -4.18197   ACTCCGGATTCAAAA               CGTTAA ATT TTAACA               TGTAACACATAATCA  59 47
CAP31_RS12050 NONE
CAP31_RS12045 NONE
CAP31_RS12040 NONE
CAP31_RS12035 2391166 .. 2391180 -  -4.2  -2.75064   CCTTCTACTTAATTA               TGGCTT CTC AAGCCC               AACTGGAGGCCAGTT  45 8
CAP31_RS12030 2390712 .. 2390728 - -10.1  -5.60993   GCGGTCATAAAAAAA              GCCGAGC TAA ACTCGGC              TTTTTTTATGTCTCT 100 46
CAP31_RS12015 NONE
CAP31_RS12010 2382455 .. 2382472 - -12.7  -4.68103   CCAAGGCGAAGAAAA             GCCCCTG CAAA CAGGGGC              TTAAAATTAAAACTT 100 65
CAP31_RS11990 2378265 .. 2378283 - -11.6   -3.7108   ACGGCCATACTCAAA             GAGGCGGC GCT GCCGCCGC             AGTATCTGGAACTGG  80 449
CAP31_RS11945 NONE
CAP31_RS11940 2367961 .. 2367985 -  -2.8  -2.72344   TTGCAGCCGCAACTA          TCGCACATGG CAAAT CCTTATACGA          GATTGGTTATGTGAT  41 32
        hypB NONE
CAP31_RS11930 NONE
        hypF NONE
        hypE 2362697 .. 2362707 -  -6.8  -2.71339   CAGTAACCAAAAACT                 GCCT GGA AGGC                 CTCGAGCATTCATCA  55 143
CAP31_RS11915 2362028 .. 2362068 -  -4.9   -4.9218   GATGCAGGACAAAAA CGGCCCCTG--A-C-GGCTTA TTT CAAGCCGGGTTTCAGGGGCCG TTCCGGTATTAACGC  78 34
CAP31_RS11900 2357488 .. 2357499 -  -7.2   -3.4072   CATTCCCCAGCATAA                GCGC CAAT GCGC                 GCTAATACGCTAATG  61 27
CAP31_RS11895 2356636 .. 2356691 - -15.6  -3.35015   GCAACTATTGCAGAA CGCC-GATCCGGCGCAGCTTGCGC-GC GATTT GCTGCGCGAACTGCGC-GAATCCGGCG CCAGTCACGTCCTTA  87 248
        queG NONE
CAP31_RS11870 NONE
        rfbF NONE
        rfbG NONE
CAP31_RS11855 NONE
CAP31_RS11850 NONE
CAP31_RS11845 NONE
CAP31_RS11840 2345603 .. 2345627 -  -6.5  -4.82901   GTTGCGCCATAAAAA          CGTTTGTTCAA CCA TTGAACATACA          GAATTTAAGCATTTA  80 60
CAP31_RS11835 NONE
CAP31_RS11830 2343219 .. 2343229 -  -2.6  -3.93236   GATTAATTGCACAAA                 TTTA CCT TAAA                 TAAAATATTGTTTTG  54 185
CAP31_RS11825 2341792 .. 2341802 -    -4  -2.94411   AGTTTTGCAAATAAG                 TGAT GCC ATCA                 TGCACGCCCATACTT  47 23
CAP31_RS11820 NONE
CAP31_RS11815 NONE
CAP31_RS11810 2336059 .. 2336072 -  -3.1  -3.77806   GGTTATACCAAAACA               GCATT AGTA AACGC                CATATTCCTTCGACG  52 15
         gmd NONE
CAP31_RS11800 2333980 .. 2334009 -  -9.1  -3.57441   AATTCATAAGCATAA       CGGCCGATTCCCG TTAG CGGGTAGCGGACG        ATATCCGCACCAAAC  72 48
CAP31_RS11795 NONE
CAP31_RS11790 2331708 .. 2331724 -  -5.1  -3.40073   AGCGCCAGTAATTAA              TACCTTC ACT GACGGTA              CCTCTTCACTAAATC  54 14
CAP31_RS11785 NONE
CAP31_RS11780 2330173 .. 2330190 -  -4.1  -2.71263   AATGCGTTTTAATGA             GAAACCC CATC GCGTTTC              AATACCTTGAATGCG  45 1
CAP31_RS11775 2327915 .. 2327925 -  -2.4   -2.7961   AAATGAGTAATATTA                 GCGC ATT GCGG                 AAAAAACAGCTTACT  40 36
CAP31_RS11770 NONE
CAP31_RS11765 2327214 .. 2327231 -  -6.9  -4.27316   CGGTCGAAGTCAAAA             GTCAGCG AATT CGCTGCC              ATACTAGTGCGACAA  74 29
CAP31_RS11760 2325708 .. 2325751 - -15.3  -2.82759   AAGATAGGCACGATA CGCTTCACTGCGCTGGCGA TGATCG TCGCCAGCGCAGTCACGCT CGCCCACTTTGCTGC  81 320
CAP31_RS11725 NONE
        pyrG NONE
CAP31_RS11715 NONE
CAP31_RS11710 NONE
CAP31_RS11705 NONE
CAP31_RS11700 2314475 .. 2314485 -  -8.2   -4.0825   GGTTCAATTAAACAA                 GCGC AAT GCGC                 GTCGGCCGCCGGCGG  76 3
CAP31_RS11695 NONE
        galU 2311201 .. 2311213 -  -6.9  -4.08394   ATACCGGGCTCAAAA                CCGCA ATG CGCGG                TCGTGTCAGCCGACA  68 303
CAP31_RS11675 NONE
CAP31_RS11670 NONE
CAP31_RS11665 2306373 .. 2306387 -  -4.2  -5.26875   TCCTGAACTAAAAAA               GAGGTC TCT GACCTT               ACCGTACGGAGCAAG  79 89
CAP31_RS11660 2305925 .. 2305946 - -14.5   -5.4505   CGCTGCAATAAAAAA           GGGCAGATC CGCG GATCTGCCC            TTTTTAACAGCGATA 100 49
CAP31_RS11640 2300664 .. 2300679 - -11.8  -5.06414   TCCGGGCAATAAAAA              GCCGGG CAAG CCCGGC               TTTTTATCACATCAC 100 49
CAP31_RS11625 NONE
CAP31_RS11620 2296430 .. 2296463 -  -7.3  -3.13073   ATGCTCACCAAGATA     CTG-GCCGCCAAGCGC GCT GCGCGCAGCGGCGCAC     ACACCATTATCGCAT  57 465
CAP31_RS11595 2292610 .. 2292634 -  -9.3  -2.71712   CGCTGCGCGGCAAAT          GCACGCCGCAA TGC TTGCAACGTAC          CATGTCTTCGGCGGA  64 277
CAP31_RS11590 NONE
CAP31_RS11585 2289049 .. 2289062 -  -8.1  -4.15222   ATGCTCTTCAACAAA               GTCGG CATC CCGAC                CAATATGCCCACCAT  73 525
CAP31_RS11560 2285122 .. 2285139 - -12.7   -5.4833   GCAGGCAACAAAAAA             GCCGACC CTCA GGTCGGC              TTTTTTGCAAACAAG 100 50
CAP31_RS11555 NONE
CAP31_RS11550 2282911 .. 2282925 -  -2.8  -4.09685   GCGGACTGGCGAAAA               TGATGC GCG GCATGA               AGGGCATGATGCCGG  56 338
CAP31_RS11535 NONE
CAP31_RS11530 2280192 .. 2280244 -  -4.8  -2.54634   TGCTACAGGATGAAT GGCACGCGCCCACGCTATACAAGGC GATT GCCTCAT-CATGGTGAGCGCGTACT TAAACTTGTCCAGCT  47 53
CAP31_RS11525 NONE
CAP31_RS11520 2278686 .. 2278699 -  -2.3  -2.73364   GCTGGACGTTAATTA               TTCGC CCCA GCGAT                ACTGATGGCAGAACT  39 9
CAP31_RS11515 2278168 .. 2278178 -    -4  -3.21872   TGTAAATATACTTAA                 CTTA TAT TAAG                 CCATCAGGTTCTGCA  49 105
CAP31_RS11510 2276992 .. 2277013 -  -7.3  -3.37612   GGCAATGGCAACGAA           TGTCATCCG ATCA CTGATGACA            TTCATCGAAACCATG  61 149
CAP31_RS11460 NONE
CAP31_RS11455 NONE
CAP31_RS11450 NONE
CAP31_RS11445 2262132 .. 2262169 - -13.5  -4.55887   CCTGAAAAATATAAA   CCGCCAAGACAAACTCGG GCA CCTCGTT-GTCTTGGCGG   TTTGATCATTTGCAT 100 55
CAP31_RS11440 2259819 .. 2259848 -  -4.9  -2.64616   CTCTTATTGATATCA       GCCCGCGTGTCGTT TTC AGCG-CACGCAGTC       CACATAATAAACAGC  47 11
CAP31_RS11435 NONE
CAP31_RS11430 2258594 .. 2258618 -  -2.7  -3.01791   ACCTGTTCTGGAATA          CCGGAATCG CCCGCCT CGGTGCCGG          ACGTACCGCACTATT  42 209
CAP31_RS11420 2256740 .. 2256757 -  -7.1  -4.50943   TAATAACGGATAAAA             TAGTAAC TTTC GTTACTA              TTTACGTCAACACAA  77 159
CAP31_RS11415 NONE
CAP31_RS11410 NONE
CAP31_RS11405 NONE
CAP31_RS11400 2249902 .. 2249922 -  -6.7  -2.65091   ACGCGAAGCCATAAC            CCGGCTTGC GCC GCAGGACGG            CAGCATGCTGATGAT  50 378
        grxD 2241868 .. 2241896 - -21.1  -5.00884   ACCCGGCGCAAAAAA        GCCCTTGCCAGTC ACA GACCGGCAAGGGC        TTTTTTGAACAATCC 100 93
CAP31_RS11330 NONE
CAP31_RS11325 2232010 .. 2232022 -  -4.8  -4.85599   CTCACCCTACAAAAA                GCGA TCCAG TCGC                TTGCGACTGGCTTTG  76 4
CAP31_RS11320 NONE
CAP31_RS11315 2229280 .. 2229324 -  -2.2  -4.07618   GGCGCAAGAATGAAA GCCAA-TGCTGCCCTG-CTC AAGGGCG GAATCATGGCAGCTTTTGGC CTATTCGTTCTGGCT  56 391
CAP31_RS11290 2226007 .. 2226019 -  -4.7  -2.92018   AAGACGCGAATTATA                GGCGG AAT CGGCC                ATATTTGTAAACCCC  49 69
CAP31_RS11285 2225853 .. 2225907 - -21.6  -4.08706   GGGTGATGACAGAAA GCACAACGCCCCGGTTTAGCTGACCT GTG AAATCAGTTAAACCGGGGCGTTGAGT AATACTTGGTGGAGG 100 32
CAP31_RS11280 NONE
CAP31_RS11275 2223590 .. 2223604 -    -7  -3.77806   TCCTAGAGTAAAATA               CCTGCC CCT GGCCGG               GCACACCGTCCAGCA  66 66
CAP31_RS11270 2221198 .. 2221210 -  -7.7  -3.02144   CCACTGGTTTCAACA                TGCCT GAC AGGCA                ACCATACACGAATGA  61 146
CAP31_RS11265 NONE
CAP31_RS11260 NONE
CAP31_RS11255 2217433 .. 2217444 -  -2.2   -3.4574   TGTACCAGCAAAAAC                CTCG CTGT CAAG                 CGCAAAACAGGGGAT  45 115
CAP31_RS11250 NONE
CAP31_RS11245 2216980 .. 2217001 - -14.5  -4.26881   GGCTAGAAAATTAAA           CGGGTTGCA TCGC TGCAACCCG            TCAAGATTGGCGTCC 100 33
CAP31_RS11240 2216832 .. 2216859 -  -8.6  -4.29493   CAGGAAATACATAAA        TATTGCCGAA ATTCATCA TTCGGCAATA         TTCAGCATGTATGTT  79 40
CAP31_RS11235 NONE
CAP31_RS11230 NONE
CAP31_RS11225 2215486 .. 2215503 -  -2.7  -4.09685   GTTCATTCCTTAAAA             GTTAAAG CCGA CTTTCAC              ACGAAATTCCTGTTT  56 2
CAP31_RS11220 2214933 .. 2214944 -  -3.6  -3.05715   AAGGCTGTCATTTAA                GCAC CGTC GCGC                 AGGTGGCCAGCAGGC  45 6
CAP31_RS11215 2213980 .. 2213995 -  -3.2  -3.05463   ATGGTCGTCAGGTAA              TGACAC GGGT GCGCCA               GGCGGCAGGATAAAG  43 2
CAP31_RS11210 NONE
CAP31_RS11205 2211868 .. 2211891 -  -8.8  -4.72272   TTCGGTTATGAAAAA          GGCGCGC-CTG CAA CAGCGCGAGCC          GACGCAAACAAGCCT  86 248
CAP31_RS11195 NONE
CAP31_RS11190 NONE
        cydB NONE
CAP31_RS11180 NONE
CAP31_RS11175 NONE
CAP31_RS11170 NONE
CAP31_RS11165 2207048 .. 2207072 -    -2  -5.42514   GTATAAATTAAAAAA          TCAAGCGGGA TGTCC TTCCGCGCGA          TTACGCATGTGGTCA  76 1
CAP31_RS11160 2206341 .. 2206353 -  -6.2  -3.11118   ACAATCCATCGAACA                CGCC GACAA GGCG                ATGTATGCCGCCAAA  55 307
CAP31_RS11145 NONE
CAP31_RS11140 2203367 .. 2203382 -  -2.5  -2.72144   GCACCCCTCTCAAAC              GCTCG TCTCCG CAAGC               TCTGGCAGACTTTCC  39 4
CAP31_RS11135 NONE
CAP31_RS11130 NONE
CAP31_RS11125 NONE
CAP31_RS11120 2197180 .. 2197190 -  -5.4  -3.53444   CCATTTCTCGTTAAA                 TCAG GCG CTGA                 ACGACTTCCAGCAGG  58 10
CAP31_RS11115 NONE
CAP31_RS11110 NONE
CAP31_RS11105 2192800 .. 2192825 -  -7.5  -2.69964   GGTTCAAGCATACCA         GAGCGTCACCC ACCC GGGTATCACTC          CAGCATTTTTTTGTT  58 20
CAP31_RS11100 2190910 .. 2190927 -  -8.4  -3.08867   TGAACCTGGAAGATA             CGCTGG CTTATC CCAGCG              CATCCACCGCATTCA  60 290
CAP31_RS11090 2187196 .. 2187244 -    -3  -4.26327   CATGTATGAAAACAA GATCTCA-CGGCGCAGAGCTCGG GTCA CCGACCTCTGCGAAGCCGAGGTA TCCGTGTTCGGCGCC  61 81
CAP31_RS11080 2185263 .. 2185283 -  -2.6  -4.56597   TTGCTGTTTTAAAAA            CAGGAT ATCTCTTCA ATCCTG            TTTCAAGATTCATAT  65 28
CAP31_RS11055 NONE
CAP31_RS11050 2178643 .. 2178663 -  -5.5  -3.18032   GAAGAACATTCAATA            CTAAAGC TAAACAG GCTTTAG            GTCAAAAAAATTACC  54 36
        ilvB NONE
CAP31_RS11040 2176372 .. 2176404 -  -2.6  -4.81523   AAGTAAAAATCAAAA      TGCGACCACACACG TATTG CGTGCGCAGTCTTA      AACTTTAAGTATGCG  69 23
CAP31_RS11035 2175287 .. 2175313 - -18.2  -3.76224   TTGGCAGGTACCAAA         CAAAACGAGGTC TGC GACCTCGTTTTG         GCTTTATCATCAGTT 100 35
        pssA 2174215 .. 2174233 -  -2.5   -3.1489   CTAAATATCACTGAA            CTGGTTTG CCTG CAAA-CAG             ATGATTGCCAGGCAC  43 171
CAP31_RS11025 NONE
CAP31_RS11020 2171801 .. 2171811 -  -6.8  -4.11216   CCTGTATCCGGAAAA                 CAGC GAT GCTG                 ATGAAGTGAGATGTG  68 275
CAP31_RS10995 2166529 .. 2166547 - -11.7  -5.03314   CGCAGCCGCAAAAAA             GCCCAGG TCATG CCTGGGC             TTTTTTTTATCAGTG 100 66
CAP31_RS10970 NONE
CAP31_RS10965 2160881 .. 2160903 -  -8.4  -4.86731   CGCCCCCAAACAAAA           CCGGCGCA TGATTAC TGCGCCAG           CGCTTTGAGCACCTG  88 14
CAP31_RS10930 NONE
CAP31_RS10925 2153191 .. 2153206 -  -7.6  -3.53444   GGATGCGCTGGTAAA              CATTGC AACA GCAATG               GGTTGCCGTGTGCAT  61 351
CAP31_RS10905 NONE
CAP31_RS10900 2147643 .. 2147653 -  -4.6  -4.32034   CGACGACGACTAAAA                 GCCC AGC GGAC                 ACGCACCTCCGGCAC  64 60
CAP31_RS10885 NONE
        lysS 2143265 .. 2143278 -  -2.4  -4.57474   CGAACGCATAGAAAA               GGAA ATGGCA TTCC                ATCTGATCGGCCATG  65 303
CAP31_RS10860 NONE
CAP31_RS10855 NONE
CAP31_RS10850 2139944 .. 2139962 -  -7.4   -2.9062   CCGATTAGATAACGA             TTCGCAAC TGG GGTGCGAA             CTTTCCGGGGTATCC  59 66
CAP31_RS10845 2137202 .. 2137213 -  -5.8  -3.72893   TATGGTGCCACCAAA                CTCG CCGG CGAG                 CAGGCGATTGCGGCA  61 499
CAP31_RS10810 2131068 .. 2131088 -   -14  -5.74288   ACAAATAATAAAAAA            GGCGCGGA TAAAC TCCGCGCC            TTTTAAAGTTCAGTA 100 48
CAP31_RS10800 2129054 .. 2129098 -  -3.7  -3.59406   TAAAATAAAAAATCA GTAAGTGGCT-TGACGACAA AAATCA TCATCGTCACAGCAACTAAC GCGGTCGGGTTAACG  51 35
CAP31_RS10795 2128767 .. 2128785 -  -8.1   -5.4505   CCGGTCAACAAAAAA             GGCAGGA ATAAA CCCTGCC             TTTTTAATGTTGCAA 100 46
CAP31_RS10790 2128239 .. 2128269 -  -3.2  -2.65815   GCCACAGCCATAGCA       GTGCCAGTACGAAT TTC ATCCGTAATGGCGT       AATAGTGTAAGCGGA  41 10
CAP31_RS10785 NONE
CAP31_RS10780 2126327 .. 2126343 -  -3.7  -3.91084   CGACGCTGAACGAAA              CTACTGT CGA ACAGCAA              ATGCTGGATTTTCTG  58 307
CAP31_RS10770 NONE
CAP31_RS10765 2124139 .. 2124155 -  -4.3   -3.6692   CCGTACCGGAAAAGA              CCTGGGC GCG ACCCAGC              AAATCTATCTGAATG  54 323
CAP31_RS10755 2123445 .. 2123456 -  -2.2  -4.56775   ACCGTTCTGGAAAAA                GGAA CTTA CTCC                 GCAAGGCGCGCGCTG  65 85
CAP31_RS10720 NONE
CAP31_RS10715 NONE
CAP31_RS10710 NONE
CAP31_RS10705 NONE
CAP31_RS10700 NONE
CAP31_RS10695 NONE
CAP31_RS10690 2109292 .. 2109332 -  -6.7  -3.01791   AGGCCGGTTTCAACA  GCAGCGCGCGTATGCAATC GCC GCCTGCTCACGCACATTGC  GTCATTCATCATCTC  55 27
        soxB 2107546 .. 2107562 - -12.3  -3.36878   CTCACCGAGTGAGAA              CAGGCAG CGC CTGCCTG              CCCGCCGGCCCTCAC  85 55
        lptF NONE
        lptG 2098681 .. 2098694 -  -3.7   -2.8372   GATGCTGTATGAAAC               CCTGC TATT GCTGG                CGGTATTATTCATTG  43 341
CAP31_RS10640 NONE
CAP31_RS10635 NONE
CAP31_RS10630 2095631 .. 2095648 -  -4.1  -2.75183   ATCCTGACTTAATGA             CGGAAAT GCCG ATGTCCG              GTAAAGACCATGGCG  45 1
CAP31_RS10625 NONE
CAP31_RS10620 NONE
CAP31_RS10615 NONE
CAP31_RS10610 NONE
CAP31_RS10605 NONE
CAP31_RS10600 NONE
        prmC 2086368 .. 2086392 - -18.6  -2.75957   GACTAATTGCAACTA          CGGCAGCGGG TTAGC CCCGCTGCCG          TCCCAGACTCACCCG 100 11
CAP31_RS10585 2084348 .. 2084370 -  -4.1  -3.46602   CCGCGCACAGCAGAA          CGCCGAGCGC AACG GCA-TCGGCA           ATACCGAATTCCTCA  50 321
CAP31_RS10525 NONE
CAP31_RS10520 NONE
        scpB NONE
CAP31_RS10510 NONE
CAP31_RS10505 NONE
CAP31_RS10500 NONE
CAP31_RS10495 2070722 .. 2070750 -  -3.2  -4.31692   AACTGATCAGCAAAA       CCGGTCATC-A-GG TTC CCATCAACGACCGG       TAATGCCCGCAGTCA  60 15
CAP31_RS10490 NONE
CAP31_RS10485 NONE
        hrpA 2065538 .. 2065555 - -12.7  -5.68438   GTACCAAATAAAAAA             GCCGCAG CTTA CTGCGGC              TTTTTTATTGTCTGA 100 49
CAP31_RS10455 NONE
CAP31_RS10450 NONE
CAP31_RS10445 NONE
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB 2055388 .. 2055403 -  -6.8  -3.60538   AAAGTACTACAAATA              TAGCCC ATCA GGGCCA               TCACCGTCCCCAAGC  63 26
         pal NONE
        ygbF NONE
CAP31_RS10405 NONE
        queC NONE
CAP31_RS10395 2051272 .. 2051297 - -16.3   -6.0427   ACGAGACAAAAAAAA         CGGCTATTTCC ATAC GGAAATAGCCG          TTTTTAATTTTTAAT 100 47
CAP31_RS10375 NONE
CAP31_RS10365 2044963 .. 2044979 -  -7.9   -3.1082   TATGCAGCTAATATA              CGCCCCC GAT GAGGACG              AATAGATGCAGAGAA  61 414
CAP31_RS10350 NONE
CAP31_RS10345 NONE
CAP31_RS10340 2041006 .. 2041016 -  -5.4   -4.5774   CATGAATAATCAAAA                 CATG CTG CATG                 CGACTCCTTAGCGCC  74 33
CAP31_RS10335 2040502 .. 2040532 -  -4.7  -4.36914   CGGCGCGGGACAAAA      CAATCTGGCCGGCA TCAT CGCCGGACA-ACTG       GACTGGGTACAAGCC  68 227
CAP31_RS10320 NONE
CAP31_RS10315 NONE
        glgC NONE
CAP31_RS10305 NONE
        malQ NONE
CAP31_RS10295 NONE
CAP31_RS10290 NONE
CAP31_RS10285 2024746 .. 2024764 - -12.4  -2.68532   GCCAAACCCACATCA             CGCTCGCG CCG CGCGAGCA             TCTGCGTTATATTTG  70 477
        ppk1 2021115 .. 2021136 -  -6.5  -2.89935   AAATACCCGCAGAGA           GGCTCCGAC TGCG GTCGGAATC            GGTCCGGCTAGGGCA  54 33
CAP31_RS10255 2020711 .. 2020726 - -10.4  -3.31905   ACTGCTGACATAACA              GGCGTG CACC CACGCC               AGGGGCTACAGAAAT  77 110
CAP31_RS10190 2006944 .. 2006996 - -27.5  -3.47029   CGACTGAAACATTAA TATGACAGACAATAAAAAAGGCGCT AAA AGCGCCTTTTTTATTGTCTGTCACT CAGAACAAATCAACT 100 35
CAP31_RS10175 NONE
CAP31_RS10170 2002567 .. 2002580 -  -3.8  -3.38314   TCCAATTGTTAAAGA               GCTG TGTCGT CAGC                CAGCCTTTTCTTGCT  49 87
CAP31_RS10165 2000702 .. 2000718 - -10.9  -2.60244   GCTCTAACCAACTGA              GCTACAG ACC CTGTAGC              AGGATCTAGTCGTGT  73 139
CAP31_RS10160 NONE
CAP31_RS10155 2000419 .. 2000459 - -11.1  -3.83205   AGCTTTCACACTAAA  GCGTGAGGTCTGACGCGTC TTC AACGCGGCACACCTGACAC  TTCAAGTCAGGCTAC  86 119
CAP31_RS10150 NONE
         rrf 1997041 .. 1997064 - -13.8   -5.4505   TCTGGCAATAAAAAA          CCCCCATGGC GTAA GCCCTGGGGG           TTTCTGGAATGGGTG 100 40
CAP31_RS10120 1995111 .. 1995134 -  -7.4  -5.04249   GCGGTAAAAAACAAA          TTCCTGGTCGG CGA CCG-CCTGGAA          ATCATCCACCCTACG  88 218
        recQ NONE
CAP31_RS10100 NONE
CAP31_RS10095 NONE
CAP31_RS10090 1988627 .. 1988653 -  -4.3  -2.71791   ATTTCCTGGTCAAAG         GCGAGCTCACA GCCAT TGTGTGGCCGC         TGCGGCTGACGATCG  43 516
CAP31_RS10080 NONE
CAP31_RS10075 1985511 .. 1985525 -  -7.2  -3.42503   CGCTAACACCCATAA               CATCAA CCC TTGATG               CAGACCTTGGGCCGC  61 13
CAP31_RS10065 1984650 .. 1984668 -  -9.5  -2.54896   GCCCCATCCAAGTCA             GGCCGGG GATTG CCCGACC             TACCATGCCAACAGA  67 67
CAP31_RS10035 1977781 .. 1977801 -  -9.6   -3.1637   ACAGACGCTGATGAA            GCTGCGGG CGAGC CCCGCTGC            AGGCTAACGCGCTGG  71 48
CAP31_RS10020 1973619 .. 1973638 -  -3.5  -4.31293   GTATAGACCAAGAAA            CCCGGTA AAACCG TACCTGG             AGCTCGCAAAGTTGC  62 76
CAP31_RS10015 1970860 .. 1970874 -  -5.6  -5.27399   GAACACATGAAAAAA               GGCTTC TCC GATGCC               TACCAATCACTCCGG  86 107
CAP31_RS09995 1969588 .. 1969607 -   -15  -5.61596   ACCGGCATAAAAAAA            CCCGGCAC TTGC GTGCCGGG             TTTTTTACATCTCAA 100 47
CAP31_RS09975 NONE
CAP31_RS09970 NONE
CAP31_RS09965 1965203 .. 1965217 -  -5.6   -3.1505   ATGATGGGGCAGTAA               CAGCGG ATT CAGCTG               TGGATACGAATGACC  54 19
CAP31_RS09955 1962457 .. 1962475 -  -8.8  -2.65091   ATGTGAACGGATAAT             CCCGTGAT TTT AGCACGGG             CGGCGCATTCGGTGA  64 239
CAP31_RS09950 NONE
CAP31_RS09945 NONE
        pheA NONE
CAP31_RS09935 NONE
        aroF 1955504 .. 1955556 -  -2.6  -5.54885   AATACGAAGAAAAAA CAGATGCATTACTGGCCGGATGCAA AATC TCGCACCCGGCC-GCCATACTTTAG ATGTCGCGGCCAAGT  82 22
CAP31_RS09925 1954248 .. 1954258 -  -3.2  -3.92592   ATGGCCAACATCAAA                 CGCA ATT TGCA                 ATCCCAGGGCGGCGG  56 362
CAP31_RS09900 NONE
CAP31_RS09895 NONE
        lolD NONE
CAP31_RS09885 1944734 .. 1944778 -  -6.4  -2.78596   CATCTGCTTATGATA GCTGCAAGCTGCGAAAATTT CTAGC AGATACTCGCAGCCCCCAGC CGATAAGCCTGAATT  54 1
CAP31_RS09880 1944295 .. 1944306 -  -7.2  -3.64236   ACGCAAATCTGCAAA                CGGC AAAA GCCG                 GCAGATGCACTTAAT  63 36
CAP31_RS09875 NONE
CAP31_RS09870 NONE
CAP31_RS09865 1938763 .. 1938795 -  -9.2  -5.38321   AAACAGCATAAAAAA      CGGGCCACAGTC ATCTAAACA AACTATGGCCCG      TCCTGATTTGCAAAT 100 64
CAP31_RS09855 NONE
CAP31_RS09850 1936171 .. 1936186 - -11.8  -2.97475   GCCGTCATGACAAAG              GCGCCG CAAC CGGCGC               AGGGAATACTTATCG  73 177
CAP31_RS09825 1929202 .. 1929232 -  -2.2  -3.80625   TTGTCATAATGGAAA       TCGGCAGTCCGGCG AGG CGACGGCAAGCCGC       CGCCCGCTTTCACCC  50 54
CAP31_RS09820 NONE
CAP31_RS09815 1927209 .. 1927222 -  -5.3  -5.68438   TTATCAAAGAAAAAA               CGAAA TTTA TTTCG                CATCAGTCAGGCAAA  89 46
CAP31_RS09810 NONE
CAP31_RS09805 1926231 .. 1926286 -  -4.6  -4.08692   GAACGCGGCGTAAAA CTGATCGGCGCCACCAGCCATTACGTC ACC GAGGTGCTGGACGACGGC-CCGATCAT CGAACAGGATGTCGC  61 276
CAP31_RS09795 1922319 .. 1922347 -  -3.1   -2.8619   TCAAAATTCAGCATA        CGGTGCTCC TTGATTTATGT GCAGCACCG        CCAGAATTGACTGGC  42 54
CAP31_RS09790 1921166 .. 1921184 -   -11  -5.30616   CCACCTAAATAAAAA             GGCGCATC GTA AATGCGCC             TTTTTATTAACTTCC 100 43
CAP31_RS09785 1919834 .. 1919865 -  -9.4  -3.14463   AACGGTTCGGACGAA      GGCACCCCGAAG GGGCGAGG CTGCAGGGTGCC       GTTCTCTTTGGTTAC  68 277
CAP31_RS09765 1917739 .. 1917750 -  -3.6  -3.09834   CATCGCACCACTCAA                CACC ATCG GGCG                 CATCCACTGTCCAGT  46 259
CAP31_RS09755 1915275 .. 1915330 -  -9.8    -4.431   GAGCCAGGGACAAAA GCAAAGCCGCCTGGTG-GCCTGGACT TTTCTC AATCC-GGCACAGCAGACGGCCTGGC GCAAACTGCGCTGGT  90 104
CAP31_RS09740 1912488 .. 1912513 -  -7.5  -2.92026   CATGGCAACATGACA         CGAAATCCGGC TGTT GCCGATCTTCG          GACTCTTCTGCGCTG  59 90
CAP31_RS09735 NONE
CAP31_RS09730 NONE
CAP31_RS09725 NONE
CAP31_RS09720 1906254 .. 1906275 -  -9.3  -3.05046   TCATCGGTTTAAAAT           CCGCCCCGC AACA ACGGGGCGC            TGACTGCTGCAACAC  67 99
CAP31_RS09715 1905614 .. 1905643 - -17.9  -2.61913   AATACAGACAGGAAG       CGCGGCACCCGCCA GCA TGGCGGGCGCCG-G       ATAAGCAGCGTTTAG 100 37
CAP31_RS09710 1903099 .. 1903115 -  -5.8  -3.90744   CTTTTGCTGAAAGAA              TCCGGC GGGAA ACCGGA              TTACTCACCATCGCC  64 264
CAP31_RS09695 1900147 .. 1900157 -  -6.8  -3.72576   GTCCTCGGCATGAAA                 CTGC TGC GCAG                 GACCGATTATCCCGA  63 398
CAP31_RS09680 NONE
CAP31_RS09675 NONE
CAP31_RS09670 NONE
CAP31_RS09665 NONE
CAP31_RS09660 NONE
        atpE NONE
CAP31_RS09650 NONE
CAP31_RS09645 NONE
CAP31_RS09640 NONE
CAP31_RS09635 NONE
CAP31_RS09630 1890588 .. 1890602 -  -3.4  -2.94322   ACCGGATGGAAACGA               CGACGG GAA CCGCCT               GCTGTTTTCAAGAAT  45 107
CAP31_RS09625 1889862 .. 1889876 -  -9.2  -5.06103   ATAATTGCGAAAAAA               CGGGCA ATC CGCCCG               CGCCATTGTTAATCG 100 34
CAP31_RS09620 NONE
CAP31_RS09615 1889067 .. 1889083 -  -2.1  -4.14725   CACCCAAACCACAAA              TCCCGGC TAT GGCGCGA              TCACACTCAGTCTCG  55 157
CAP31_RS09605 1887088 .. 1887134 -  -7.5  -3.77087   GACTGAACAGCCAAA GATGTGCATGAGCAGCGAACTGC AAA GCAATCAGCC-CTCATG-ACATC ATGATCTTGCTGGTT  69 74
CAP31_RS09600 1885315 .. 1885327 -  -5.5  -5.09204   ACATGGGAATAAAAA                TCGCC CTT GACGA                CTTTGGTACCGGCTA  84 458
CAP31_RS09580 1879423 .. 1879441 -    -3  -3.53224   CAGCGCCCGCTCAAA             CATGGTCG TAT CGTTCATG             ATATTTCCTTCAAGC  49 78
         tkt NONE
CAP31_RS09570 1876741 .. 1876754 -  -5.3  -3.05384   TCTCCGTTCAGGTAA               GCAAA GGGG TTTGC                CACCGCAGAATGCCG  50 122
CAP31_RS09560 NONE
CAP31_RS09555 NONE
CAP31_RS09550 1873546 .. 1873566 -  -6.9  -4.21141   TTGTAATAAATCAAA            TTCATACAC GAG GTGTTTGAA            TACCGCCCGGATGTA  74 171
        mobB NONE
CAP31_RS09535 NONE
CAP31_RS09530 NONE
CAP31_RS09525 NONE
CAP31_RS09520 1866984 .. 1867000 -  -2.9  -4.11183   GGCCAGGACAAACAA              CTGGTGG TCG CCATCAA              TGTTTCAGCGTTGCA  58 518
CAP31_RS09500 NONE
CAP31_RS09495 1860497 .. 1860522 -  -6.1  -3.54029   CCTCATCAAGGAGAA         CCATATTGCCG CTGC CGGCAGTATCG          AAGCGGTGCTCAAAG  56 333
        clpB 1857167 .. 1857189 - -14.9  -5.68489   CATAACAATAAAAAA           CGGAACGCC TTACC GGCGTTCCG           TTTTTTATTGGTCGA 100 73
CAP31_RS09440 1848821 .. 1848832 -  -5.8  -3.60006   AACGACATCCTGAAA                CAGG ATAA CCTG                 CTGCTCGCCCCACAC  58 164
CAP31_RS09430 1846638 .. 1846655 - -12.7  -5.02074   GCAGCCCGTAAAAAA             GCGGTGC ACTT GCACCGC              TTTCCGCTTGCCCGT 100 47
CAP31_RS09420 NONE
CAP31_RS09415 1844102 .. 1844149 -    -4  -4.15508   AATGAATCGGCAAAA CAGGCGCCGCTGAGAC-CCAGCA GCG TAATGGCAACCCAGCGGCGCATT ACTTGATGCTTGCTT  61 24
CAP31_RS09410 NONE
CAP31_RS09405 1842215 .. 1842231 -  -2.2  -4.81814   ATCAGGACAAGAAAA             CGCCGCA GTAT CG-GGCG              CTGCACTGGTAATCC  67 129
CAP31_RS09385 NONE
CAP31_RS09380 NONE
CAP31_RS09375 NONE
CAP31_RS09370 1831679 .. 1831698 -    -5  -4.11216   CCGCGACTCGTAAAA            GTGTCGTT GCAC AACTACAC             GAACCCAAGGAAATG  64 100
CAP31_RS09365 NONE
CAP31_RS09360 1830917 .. 1830933 -  -2.2  -3.51708   CATTCGTCAAATGAA              TTAGGC AGACA GCCTCA              TCAGGTCTGAGCCAT  47 71
CAP31_RS09355 NONE
CAP31_RS09350 1829384 .. 1829401 - -12.7  -5.47431   CGAACACATAAAAAA             GCGCCTC TGCG GAGGCGC              TTTTATTCGGCTTGA 100 68
CAP31_RS09340 1826902 .. 1826913 -  -3.6  -5.14163   ACCTATCAACAAAAA                CCGG CAAA CCGA                 TATTAACGCACTCGG  77 28
CAP31_RS09335 1826355 .. 1826366 -  -4.4  -3.11024   CGGCGTAACAGAAAT                TGCA TACG TGCA                 CTTAGCACATGCATT  47 27
CAP31_RS09330 1825581 .. 1825601 -  -7.6  -2.72511   TCCATCCGGGTAAAG            GCCGGTAT CTTTT ATACCAGC            ATCATTGGCGGTTGC  53 204
CAP31_RS09320 1824846 .. 1824893 -  -5.6  -3.29459   CATTGAACAACTGAA TCTGAACTGACAGCTGCATCTGT CAA ACCGGGG-AACTGTCAGATCAGA TCGCGACTACTACAC  54 200
        phnF NONE
        phnD 1821883 .. 1821913 - -15.5  -2.71001   GACCTCCAAATTAAT       TCGCGGTCGGCAA TTACC TCACCGACCGCGA       CACTTCAATTACTTC  90 34
        phnC NONE
        phnE NONE
        phnE NONE
        phnG NONE
        phnH NONE
CAP31_RS09275 NONE
CAP31_RS09270 NONE
        phnK NONE
        phnL NONE
CAP31_RS09255 NONE
CAP31_RS09250 NONE
        phnP NONE
CAP31_RS09240 1811595 .. 1811609 -  -2.8   -3.2963   ATCAGTTTTCCATAA               GACTGA AAT TCAACC               GGTCATTAGGCTCAC  45 20
CAP31_RS09230 NONE
CAP31_RS09225 NONE
CAP31_RS09220 1808929 .. 1808940 -    -3  -2.76404   CCGATTTAAAATTGA                TACA GTTT TGTA                 ATGAGCGCCGATTCA  42 75
CAP31_RS09215 1807886 .. 1807903 -  -9.9  -2.84812   ATTCAGATCACCAGA             GGCAAAG ACGA CTTTGCC              AATGGCGTCGTGAAT  63 446
CAP31_RS09195 1799803 .. 1799821 -  -3.2  -4.19746   TCGATTGTAAAAGAA             CTTTCATA TCG TATTAAAG             ATCGCAACAGGATGT  61 51
CAP31_RS09185 1798432 .. 1798444 -  -4.9  -2.83822   TTTATTCCATAAGTA                GTTAT TTC ATAAC                TCATATGTCGATAGA  49 19
CAP31_RS09180 NONE
CAP31_RS09175 NONE
CAP31_RS09170 1794227 .. 1794239 -  -3.3  -3.34895   GGTATTTCGAACGAA                CAGCC CCC GACCG                CGTTAGCGCAATGAC  49 173
CAP31_RS09160 1792476 .. 1792504 - -16.7  -3.64487   GGATACTCTGAACAA        CCCCGTCTGCCGC GCA GCGGCAGACGGCA        CTGCTTTAAATTTCA 100 128
CAP31_RS09155 1791318 .. 1791336 -  -3.8  -2.93891   ATTTTCAAAATATCA             GCAAGC TACGACT GCCTGC             GTTCAGATACACCAA  45 69
CAP31_RS09150 1790325 .. 1790344 - -11.4  -4.09459   TCAAAAACGGAGAAA            CCGGTAGC TGGC GCCACCGG             GTGCTACTGCGCGAA  89 509
CAP31_RS09140 1789440 .. 1789460 -    -4  -3.35679   TCGTTTCACTCACAA            CCTGCT CCTTTGTTC AGCAGG            TTACTATCTTAATTC  51 119
CAP31_RS09135 NONE
CAP31_RS09130 1787752 .. 1787774 -  -3.2  -3.25073   TCGCCAACATCAACA           CGCCGGAGGA GCT TGCGCTGGCG           GAACAACGTCTCGGC  45 391
        moaA NONE
        moaC 1782054 .. 1782070 -  -4.3  -2.91681   TTGCAACCTCATAGA              GGTTCCG CAA CGATACC              TTCCACATTCTGTGT  46 2
CAP31_RS09090 1781481 .. 1781512 -   -11  -2.53263   GTTATTTGTAAGCCA      TGATGACGATTTGC ACGG ACATATCGTCATCA       CGTAACATGCGTTGT  73 42
CAP31_RS09085 NONE
        tatB 1780594 .. 1780616 -    -4  -3.48684   TCACAATCACGACAA           TGACCGAACG CAG CAAGCGGTCA           CGCAATTCGATCAGA  53 75
CAP31_RS09075 NONE
CAP31_RS09070 1779789 .. 1779801 -  -6.3  -3.78775   CTGTGCATCATCAAA                TCTAC GGA GTAGA                TCCAGCATAACCCGT  64 43
CAP31_RS08935 NONE
CAP31_RS08930 1751949 .. 1751964 -  -4.6  -4.71307   TAAAAATCAAACAAA              TTCCGG CAAA CCGGAG               TTATCTCAACTAAAT  69 152
CAP31_RS08925 1750691 .. 1750743 - -35.5  -3.14344   GATTTGGGGTATGAA TACTGTCAACGCCAACTTAAAACTG TAT CAGTTTTAAGTTGGCGTTGACAGTA TTCATACCCCAAGCT 100 96
CAP31_RS08920 1749937 .. 1749951 -  -5.6  -3.85522   AACCGATCAGAAGAA               CGTGTC TCT GGCACG               GATGAAATCTGCCAG  63 323
CAP31_RS08915 1749456 .. 1749466 -  -5.4  -3.76373   TTTGTAACATCGAAA                 TCGA AGC TCGA                 TCTGTAAAAGCAATA  61 101
CAP31_RS08910 1748297 .. 1748321 -  -7.2  -2.63382   TCGTACAGCCACAAC          GATGACTATC GGGTT GACAGCCATC          TACCTCTGCAGCATA  55 249
CAP31_RS08900 NONE
CAP31_RS08895 NONE
CAP31_RS08890 NONE
CAP31_RS08885 NONE
CAP31_RS08880 1741100 .. 1741114 -  -5.6  -3.73756   CATCTCACGAAAAGA               CTGGGG AAG CCTCAG               CAGATCATGCCTGCC  61 22
CAP31_RS08875 NONE
        cobA 1738986 .. 1739011 -  -6.1  -2.87683   ATATTCTTTCAGATA         CACTGCACTGC TATG ACAATGCCGTG          CCATGAACACCACTG  54 240
CAP31_RS08865 1736805 .. 1736820 -  -6.1  -4.58663   ACTAGCTGTTAAAAA              CCCAC ATATTA GTGGG               AGGTTCAACTAATGA  78 205
CAP31_RS08860 1736356 .. 1736370 -  -4.2  -2.85351   CGTTTTTAGATGATA               CAGGCA ATC CACCTG               CGTATTCTGTTGAAC  46 126
CAP31_RS08840 1730782 .. 1730792 -  -3.2  -2.71712   GCGCTTCCGCTAAAG                 GGTA TAA CACC                 AACTTAGCGAGAACC  41 51
CAP31_RS08835 NONE
CAP31_RS08830 NONE
CAP31_RS08825 NONE
CAP31_RS08820 1723329 .. 1723344 -  -4.8  -4.15328   AAGCCAAATCAGAAA              CATAAA TTTT TTTATG               CATATGTAATTTTTT  64 241
CAP31_RS08815 1722450 .. 1722466 -  -3.8  -3.74519   AATACTTCTACTAAA              CAATAA ATTGA TTATTG              GCACTCAGTGCTGCT  54 4
CAP31_RS08810 1721222 .. 1721238 -  -5.9  -2.71125   ATTGTGGACAAATAC              GACAAAA AAC TCTTGTC              CGGGCACCCGAGTGA  48 168
CAP31_RS08795 1718737 .. 1718757 -    -4  -3.35679   TCGTTTCACTCACAA            CCTGCT CCTTTGTTC AGCAGG            TTACTATCTTAATTC  51 29
CAP31_RS08790 NONE
CAP31_RS08785 1717327 .. 1717342 -  -4.6  -3.35867   CCAATCGGCAACGAA              GTACCG CAAT CGGGAC               AGTGAGATATCTGAT  51 120
CAP31_RS08780 1715057 .. 1715069 -  -3.3  -3.25166   CTAGGTTAAAAATGA                CCACC TGT GCTGG                TTTAAAATTGACCAG  47 260
CAP31_RS08775 1714578 .. 1714600 -  -7.7  -3.03243   ACCTATTTGGGAAGA           TGGCCGGAT TTTGG ATTCGGCCA           TGATCACAGACGAGG  61 58
CAP31_RS08770 1713752 .. 1713767 -    -9  -3.63627   TTTGCACAGTTCAAA              TCAGCC TTAC GGCTGA               TGGCTGCCTGCTTAC  72 124
CAP31_RS08745 1710377 .. 1710387 -    -4  -3.32343   TCCACAGGTGGACAA                 GTAT GCA ATAC                 CTGACTAAATTAGTC  51 35
        cysE NONE
        iscR NONE
CAP31_RS08730 1707820 .. 1707830 -  -2.4  -3.08032   GTTCTCCTAAAATTA                 GTGC GCT GCCC                 ATTTCACGCTGTTCA  42 12
CAP31_RS08725 NONE
        iscA NONE
CAP31_RS08715 1706449 .. 1706466 -  -3.5  -3.37344   GTGCCATGTAATTAA             TTATCCA ATAC TGAATAA              GCGTCGTCGATCTCG  49 4
        hscA NONE
         fdx NONE
        iscX 1703999 .. 1704017 -   -16  -4.18494   GACCCTCATGCAAAA             GGCCGGGA ATA TCCCGGCC             TTTTGCATGAGTCAT 100 40
CAP31_RS08685 NONE
CAP31_RS08680 1699753 .. 1699769 -  -2.1  -2.67825   ATCAACAATATCAAC              CATCAGG CAT CCAGTTG              AAGACCACAAGCATG  39 11
CAP31_RS08675 NONE
CAP31_RS08670 1697871 .. 1697886 -  -4.6   -4.2528   CTGGAATTGAACAAA              GCCGCG TTTT CACAGC               AATGGCAGATTGCAT  65 250
CAP31_RS08650 NONE
CAP31_RS08645 1692726 .. 1692746 - -12.6  -4.07568   GGTTGCGTGGTAAAA            CAGACCGC TGGTG GCGGTCTG            GTGGTGGTTTTTTCA  95 38
CAP31_RS08640 NONE
CAP31_RS08635 1689520 .. 1689558 -  -7.4  -5.26119   GGGTTAAAAATAAAA  CAGCCCCGCG-CGGCG TGTAATTAG CGCGGACGCGGGGC-G  TTAGATTTTTTTGCG  91 7
CAP31_RS08630 NONE
CAP31_RS08625 1686549 .. 1686560 -  -5.8  -2.50991   AGTTAAAGAAATCAG                CCAC CCAG GTGG                 ATTGCATTTTCGCGA  49 10
CAP31_RS08620 NONE
CAP31_RS08615 1685771 .. 1685791 - -12.5  -3.14132   GCTTTTTTTGAGCAA            CGCGAGCCC GTA GGGCTGGCG            TTTCCATAACCTGCA  81 138
CAP31_RS08605 1684891 .. 1684904 -  -4.5  -2.53911   CTAACGCCCAATCGA               TGCCA GAAC CGGCA                TAAGATAAAGAGCCT  44 105
CAP31_RS08550 1676340 .. 1676366 -  -9.6  -5.94597   CAAGACGAAAAAAAA         TCCATTAACG CATTCAT CGTTAATGGA         TTTCTTTAAGAACAA 100 50
CAP31_RS08525 1671720 .. 1671736 -  -4.3  -3.03243   AGCCACCTGTCAATA              CACGGGT GTC AGCCGCG              GCCTTTACACCGGCA  47 288
CAP31_RS08515 NONE
CAP31_RS08510 NONE
CAP31_RS08505 1663836 .. 1663872 -  -3.8  -3.80133   GAGCGCTACAAAATA   CTGATA-GGCACGGATT AATT AACCCGTGCCGCATTAA    CTACGTTGGATAATC  54 3
CAP31_RS08500 1663388 .. 1663402 -    -5  -4.87318   CTTAAAAGTTAAAAA               CCATAA TTT TTACGG               AGAAAAATATTTCTC  76 173
CAP31_RS08495 NONE
CAP31_RS08490 1662085 .. 1662101 -  -6.5  -3.71848   CCCTTGCAGTAACAA              TGCCTGC ACG GCAGGTA              AATGCCAGGCGCTAC  64 102
CAP31_RS08485 1661361 .. 1661373 -  -2.7  -3.72984   CCACAAGCAGTTAAA                TATAC CAT GCATA                AAGCGGCGTGCGCAT  52 8
        motA NONE
CAP31_RS08475 1659201 .. 1659224 -  -6.8  -3.33696   GCCGGCTTGAACGAA          GCGCA-CAAGA TCA TCTTACTGCGC          AAGGCTGGCGCGTTG  56 205
CAP31_RS08435 1652597 .. 1652609 -  -4.1  -3.60048   GTTTTGGTAAAAAAT                CATCA ATC CGATG                TTGCCGTCAGACATT  53 15
CAP31_RS08430 1651770 .. 1651789 -  -3.5  -2.85402   GAAAGCATGATTATA            CGCTACC CTGCGC GCTAGCG             TGCCAACCCCTCAGG  44 56
CAP31_RS08425 NONE
CAP31_RS08415 1649366 .. 1649386 -  -2.5  -3.92178   AGTAGCGTAACCAAA            TCCCGCA GTATCGT CGCAGGA            TAGCATTTGCCTCCC  53 68
CAP31_RS08395 NONE
        flgC 1646827 .. 1646841 -  -6.4  -2.89569   TCCTTAAATTAATTA               CTGACC GAT AGTCAG               CGTTTTCTGCAACAT  54 8
CAP31_RS08385 1646143 .. 1646156 -  -2.4  -2.97408   GGTTATTTAAAGAAT               CTGA AGCACA TCAG                CCATATTGACGGTAC  42 3
        flgE NONE
        flgF 1644119 .. 1644131 -  -7.7  -3.75629   CAGTTTCAAGTCAAA                GTCAG GAT CTGAC                TGGCTTTATTGGCGT  69 3
        flgG NONE
CAP31_RS08365 NONE
CAP31_RS08360 NONE
        flgJ NONE
CAP31_RS08350 NONE
        flgL 1637574 .. 1637595 -  -5.9  -3.74747   GGAAGCCTCATTAAA           CGCATGCAA ATAT TTACATGCA            ACGGCTACTCAGGAA  61 79
CAP31_RS08340 NONE
CAP31_RS08335 1636496 .. 1636518 -  -3.4  -4.13767   GGGGTTACCGGAAAA           GCATATCTTC AAA AAAGATCCGC           TGTCCAGATTGAATC  59 92
CAP31_RS08330 NONE
CAP31_RS08325 NONE
CAP31_RS08320 NONE
CAP31_RS08315 1630768 .. 1630781 -  -3.8  -3.04239   CACATTGATACAAAC               GCAG CGCTTC CTGC                CACCTTTAGAAGGTC  45 31
CAP31_RS08310 NONE
CAP31_RS08305 NONE
CAP31_RS08300 1627418 .. 1627428 -  -3.2  -3.42228   GAATTCAAAACAAAT                 CGAT TGC ACCG                 CACACGGTGTCGACC  47 4
CAP31_RS08295 1626276 .. 1626288 -  -3.3  -4.02253   TCAACAATCTATAAA                TCAGG CAA CCGGA                ATAAACTACACTCGC  59 31
CAP31_RS08290 NONE
CAP31_RS08285 NONE
CAP31_RS08280 NONE
CAP31_RS08210 1612579 .. 1612593 -  -9.2  -2.96637   AATATACCAACCATA               GCCCGG CAT CCGGAC               GTTGATAACCTGTAT  61 175
CAP31_RS08145 1600415 .. 1600432 - -12.7  -4.67234   AGGTAATGTGAAAAA             TGCGCCG CAAT CGGCGCA              TAAAAGTCCTAGAAA 100 46
CAP31_RS08140 NONE
        clpP NONE
CAP31_RS08130 1597152 .. 1597162 -  -6.8  -3.21099   GTTTTCGATCATGAA                 GCCA GTT TGGC                 CTGATCGGCAAAAAT  59 8
CAP31_RS08125 1594488 .. 1594518 -  -7.5  -3.29461   CAATCCGCTTTATAA       CAAGCCGCAAAAC CTTAT GTCAAGCGGCTTG       TAGCGATTTTACCGA  62 63
CAP31_RS08120 1594135 .. 1594151 -  -2.2  -3.14132   GCGGTGCTCTACCAA              CTGAGC TAAGC ACCCAG              GAAAGTCGACTAGTT  43 35
CAP31_RS08115 NONE
CAP31_RS08110 1593954 .. 1593971 - -11.3  -5.92337   ATATACGAAAAAAAA             GGCGAAC CTAA GTTCGCC              TTTCATGTTGGCGGA 100 34
CAP31_RS08105 1591950 .. 1591967 -  -9.9   -5.0133   TAGCGGCGTAAAAAA             CCCAAAC CCAG GTTTGGG              TTTTTTATTGGCCAA 100 68
CAP31_RS08095 NONE
CAP31_RS08090 1587925 .. 1587945 -    -9  -2.94726   GTCCATAACACGACA            GGCTGCCA GCTCA TGACAGCC            TCACCCGGGGATCAG  67 15
CAP31_RS08085 1586521 .. 1586541 -  -2.4  -3.15544   TTCGACCCGCAGCAA            GACGTCGC TCATC GCGGCCTC            CCATGCGGATCAAAA  43 13
CAP31_RS08080 1584347 .. 1584359 -  -3.3  -5.43487   AAAGCAGACAAAAAA                CCGGT CAG ACAGG                AAAAGCCTCGACATT  84 210
CAP31_RS08065 NONE
CAP31_RS08060 1580753 .. 1580763 -  -2.6  -3.26842   AAAACAATCTATGAA                 TTAA AAA TTAA                 CACTGTTGAGATGTT  45 15
CAP31_RS08055 1578744 .. 1578772 -  -4.7   -4.2828   GTTGATGCATGAAAA       CTGGGACGTTTT ACTGTA AAAACA-CCCAG        CAAGATTTTGGAAAT  67 73
CAP31_RS08035 NONE
CAP31_RS08030 1574066 .. 1574091 - -11.9  -5.35224   GCGATAAAAACAAAA         TGCCGCAAGAA ATGC TTCTTGCGGCT          TACTCGGTCACGAAA 100 53
CAP31_RS08025 NONE
CAP31_RS08020 NONE
        fabD 1571119 .. 1571130 -    -3  -3.05384   CTTCCTCCTAGCCAA                TCAA AGTT TTGA                 ATTCGGTAATCGCAT  43 6
        fabG NONE
CAP31_RS08005 NONE
        fabF 1568721 .. 1568766 -  -9.1  -4.25056   TACTTTACGAACAAA GCCGCTGATAATTTTTACCGT GTAA ACGGTACAAGTTACCAACGGT CTGCATGATAGGACT  83 43
CAP31_RS07995 NONE
CAP31_RS07990 NONE
CAP31_RS07985 1565589 .. 1565600 -  -2.2  -3.16982   TCCAGACTAATAAAC                GGCA TGCT TACC                 CATTCTTCTGATATC  43 21
CAP31_RS07980 NONE
        holB 1563944 .. 1563967 -  -8.2  -3.28924   GAGGCCTTTGCACAA          GGTAAC-GAGC GCA GCTCAGTCACC          GCGCAACGGTCTCAG  65 37
CAP31_RS07970 NONE
CAP31_RS07965 NONE
CAP31_RS07960 NONE
CAP31_RS07955 1561023 .. 1561043 -    -9  -2.76492   TCATTCATCTCAAAG            CGCATTCG GTGTT CGAACGCG            ACCATAATGACCTGC  60 465
CAP31_RS07935 NONE
CAP31_RS07930 NONE
CAP31_RS07925 NONE
CAP31_RS07920 NONE
CAP31_RS07915 NONE
        sdhC NONE
        sdhD NONE
        sdhA 1549556 .. 1549568 -  -3.3  -3.08088   AAACCTGTCAATACA                CCCGT GCT ACCGG                CACAAAAGCCTCCAC  45 5
CAP31_RS07890 1547981 .. 1547995 -  -4.2  -3.67517   CACCAACAGCGTAAA               GCGC GTATTGA GCGC               ATTGCCTGGCGTCAA  54 152
CAP31_RS07840 NONE
CAP31_RS07835 NONE
        rfaD 1536407 .. 1536420 -  -2.3  -2.99649   AGAGTTTTATAGATA               GGCAT GATC AGGCC                TTGTACTGTTTATAT  42 19
CAP31_RS07825 NONE
CAP31_RS07820 NONE
CAP31_RS07815 1534446 .. 1534462 -  -6.6  -2.92265   ATGCATAGATAATTA              TATCCC TTTTT GGGATA              TTTACAACAATCAGA  54 102
CAP31_RS07810 NONE
CAP31_RS07805 1533354 .. 1533369 -    -9  -3.11291   TGCAGAAGCGCAACA              TTGCGC GCTG GCGCAA               AGCTTCTTTATCAGC  63 404
CAP31_RS07790 1530503 .. 1530528 - -11.8  -2.77861   CTAACGTAAAATTGA         GGGGCTGCCC GCTTCT GGGCAGTCCC          GCTCGAATGCCGGGT  77 45
CAP31_RS07785 1529610 .. 1529665 -   -13  -4.22748   TATGAATAAACCAAA GCGTTGCATCG-ACCGTGTGCATCAACG CTCG CGTT-ATACAC-CGGTACG-TGCAACGC TTTGCACCGTACCAT  95 171
CAP31_RS07780 1528778 .. 1528799 - -18.7   -3.3482   CAACGTTTGAATTAA           GGGGCGCGC TTTA GCGCGCCCC            GCTTGAATGATGGGT 100 68
CAP31_RS07775 1528254 .. 1528275 - -12.9  -3.54489   CTAACGTTAAATTAA           GGGGCGCGC TTTA GCGCGTCCC            TCTTGAATGCCGGGT  90 60
CAP31_RS07770 1526950 .. 1526965 -  -4.7  -3.24232   GCTCGGCTAAAGAGA              TCAGC GGGGCG GCTGA               GAAAATAAGCACATA  52 139
CAP31_RS07765 1526526 .. 1526546 - -16.9  -3.06796   GCGCAGCGGAGGGAA            CCCACCAGC ATA GCTGGTGGG            TGTCCGGTTGACTGA 100 61
CAP31_RS07760 NONE
CAP31_RS07755 1525511 .. 1525536 - -11.7  -3.11687   CTAACGAGTAGCTAA         GGGGCGCCGCG CTTG CGTGGCGTCCC          GCTTGAGCGCAGGGT  78 59
CAP31_RS07750 1525180 .. 1525192 -  -5.5  -3.91897   CCCCGGATGTACAAA                TGACC GCA GGCCA                TAGAGAAGCCACTTA  63 83
CAP31_RS07745 1524107 .. 1524121 -  -2.7  -3.71792   CTAACGTAAAAGTAA               GGGGC TGGCC GCGCC               TAAAACATGCCGCAG  52 110
CAP31_RS07740 1523244 .. 1523277 - -13.9  -3.14522   CTAACGTAGAGCTAA     CCGG-CGCTGCGCG GCTTTAT CGCGCAGCGTCCAG     CGACCGAAGGGAGCG  86 56
CAP31_RS07735 NONE
CAP31_RS07730 1521950 .. 1521973 -  -9.5  -3.06831   CTAACGTGGAGCTAA          GGGCTGCGC GTTTTT GCGCAGTCC           CGCTTGAGCGTAAGG  70 57
CAP31_RS07725 1521034 .. 1521050 -  -6.6  -3.21938   GCAAAATGGCAGTAA              CACAAC CTATC GTTGTG              TCTGAAAATACTTGA  57 59
CAP31_RS07715 1519388 .. 1519399 -  -2.2  -4.50193   ACTAAGCAATCAAAA                TCAG TTTA CCGA                 TGCCAGCCGCCGTCA  61 38
CAP31_RS07710 1518527 .. 1518538 -  -4.4  -2.72263   AGATTTTTGGTAAAC                CATG TGTT CATG                 TTTCCGCTGCCTGAC  45 49
CAP31_RS07705 1518201 .. 1518214 -  -3.8  -3.35679   CTCGGCTACCCACAA               GCGA GCCATG TCGC                CCATTTCCCGGCTGC  49 40
CAP31_RS07700 NONE
CAP31_RS07695 1516420 .. 1516439 -  -6.4  -3.64487   CCAGATCGGCAAGAA            CGTCCACCT GTC AGGCGG-CG            TCGGCATCGGCGGCG  58 502
CAP31_RS07680 NONE
CAP31_RS07675 NONE
CAP31_RS07670 1511650 .. 1511690 - -21.4  -4.26076   GTATTCTGACGAAAA  CAACAAGGCCCTCAGCAT TCGCC ATGCTGAGGGCCTTGTTC  ACCGGGATTCGATAT 100 44
CAP31_RS07665 1508054 .. 1508067 -  -3.7  -2.74322   CGCAATCCTTTAAAC               GTGGG CAAT CCCGC                TCCGCACGAGCAGAT  43 6
CAP31_RS07660 1507201 .. 1507214 -  -2.4  -4.11216   CCTCCACGCTGAAAA               TGAC GATAGA GTCA                CCGCAGGATGATGTG  56 220
CAP31_RS07645 1505166 .. 1505177 -  -4.4  -3.66556   AATTCCGGAACACAA                TACC CAAA GGTA                 TCAAAATTACTATTT  56 62
CAP31_RS07640 1503344 .. 1503361 -  -4.1  -2.64218   ACCGCTTATCACAAC             GGCTCAA CAGC TTCAGCC              TCTTCCTGCTGCTGC  45 1
CAP31_RS07635 1502279 .. 1502295 -  -7.3  -2.69799   TCAGTGGATAGAGCA              TTCCCCT CCT AAGGGAA              GGGTCACACGTTCGA  53 108
CAP31_RS07625 NONE
CAP31_RS07620 1500456 .. 1500469 -  -5.3  -4.12911   GAAATCCAGAAACAA               GTAAC CGCT GTTAC                CGAGATGATACCGCC  64 22
CAP31_RS07610 NONE
CAP31_RS07605 NONE
CAP31_RS07600 NONE
CAP31_RS07595 NONE
CAP31_RS07590 NONE
CAP31_RS07585 1495273 .. 1495283 -    -4    -4.652   AAATCATGTTAAAAA                 TGAA TAA TTCA                 AGGCAATTGCAGGGT  69 23
CAP31_RS07580 NONE
CAP31_RS07575 NONE
CAP31_RS07570 NONE
CAP31_RS07565 1490934 .. 1490954 -  -9.7  -3.33696   GCGCGCTGGAAGCAA            GTTTGGCGC ACT GCGGCAAAC            TGGAACGCAAATTGC  68 314
CAP31_RS07555 1490043 .. 1490060 - -11.3   -5.4833   GTATTCAATAAAAAA             GCGCACT TCAA AGTGCGC              TTTTTTATTGAACCA 100 45
CAP31_RS07520 NONE
CAP31_RS07515 NONE
CAP31_RS07510 NONE
CAP31_RS07505 1483346 .. 1483365 -  -8.6  -3.18728   ACCGGCAATATCGAA            TTGCGCAA GGAG CTGCGCAA             CCAGCTGCAAGCCAC  60 235
CAP31_RS07495 1481552 .. 1481566 -  -2.8  -3.72576   CTGCCGCCGATGAAA               CGCA GTCGCGA TGCG               GATGAAGTGATTGCA  53 70
CAP31_RS07475 NONE
CAP31_RS07470 NONE
CAP31_RS07465 NONE
CAP31_RS07460 1475464 .. 1475489 -  -8.9   -2.7185   ATGACCCTGGAACGA         GGCTTACACGC AGCA GCGTGTGGGCC          GATTAGGCATAGCAT  64 3
CAP31_RS07455 NONE
CAP31_RS07450 1473408 .. 1473425 -    -7  -2.52015   CGTACAGGCATTAAT             GCATCC TGCCAG GGATGC              CTACAATCTGGCTGC  50 280
CAP31_RS07435 NONE
CAP31_RS07430 NONE
        mlaD NONE
CAP31_RS07420 NONE
CAP31_RS07415 NONE
CAP31_RS07410 NONE
CAP31_RS07405 NONE
CAP31_RS07400 NONE
CAP31_RS07395 NONE
        murA 1463997 .. 1464011 -  -4.2  -2.52464   TTCCCCTTCAATGTA               CGCG TCGTATG CGCG               CACCGACCTGGTTGA  44 3
CAP31_RS07385 NONE
CAP31_RS07380 1461842 .. 1461861 -  -5.8  -4.05446   TTCCGCAAGGATAAA            GGCCATATC ACC GATATG-CC            TGTTCATGCCGCCCC  66 413
CAP31_RS07370 1459834 .. 1459844 -  -6.8  -4.88407   CCATTCAAGGAAAAA                 GTGG CCG CCAC                 TGCCGGATTGTTCAG  84 496
CAP31_RS07300 NONE
CAP31_RS07295 1445225 .. 1445253 -  -3.9  -2.80344   CTCTGATTGAACAAC        CTCATGACATATT GAA AATATGCCATGTT        CTCTATTCAAGCCGT  44 32
CAP31_RS07290 1444913 .. 1444938 -  -9.8  -3.80877   TCAGGGGAGAAAAGA         CGTGGCTTAA TAAAAC TCAAGCCACG          CAACAAGTTTCCGGT  79 92
CAP31_RS07285 NONE
CAP31_RS07280 NONE
CAP31_RS07275 NONE
CAP31_RS07270 1439395 .. 1439417 -  -5.5  -4.26327   CACGTACTAAAAGAA           TTAACGGCG CTCGT CGCCGGCAA           TATCCGTGCCTCCGA  67 300
CAP31_RS07245 1433088 .. 1433103 -  -3.2  -3.20029   TTATTCAAACAGACA              GATTGG AAAA CCATTC               CCGGGCATAAAATCT  45 208
CAP31_RS07240 1431955 .. 1431982 -   -12  -3.85698   TCTCCTTGCTATAAA        GTACCTGACCGG GCAT CCGGTCAGGCAT         TTATCATATTAACCG  95 42
CAP31_RS07235 NONE
CAP31_RS07230 1430094 .. 1430131 - -10.7  -2.55999   TCAGTCGATATCAAT   CGATCTGCCA-ACAAAGC AAA ACCATGTATGGCAGATCG   TCAATTTTAATCAGC  70 36
CAP31_RS07225 1427451 .. 1427468 -  -5.5   -3.6682   CCGTACTCATGCAAA             GCCGTCA TGGT TGATGGC              GCCATGCCTCCCACA  61 12
CAP31_RS07215 1424624 .. 1424641 -  -3.5  -3.48598   CAAGGAATGGAAATA             TTC-AAGC TGC GCTTTGAA             GACTTGATTGGCGCT  50 275
CAP31_RS07175 1416008 .. 1416023 -  -8.2   -2.5088   ATTAACGAAAATCAG              GCCGAC ACAA GCCGGC               GGTTAATGAAACCGT  61 48
CAP31_RS07170 NONE
CAP31_RS07165 NONE
CAP31_RS07160 NONE
CAP31_RS07155 1409666 .. 1409707 - -15.3  -3.54146   TTCTTCAATTAAAGA CCCGGCATCGACAATTGTC AACC AACATTTATCGATGCCGGA  AACTGTCCAGGTTCG 100 52
CAP31_RS07150 1408976 .. 1408992 -  -6.5  -2.52464   CCGCGGCCGAACGTA              GGGGCAA GAC TTGCCAC              CGTAGGTCCGTGTCA  52 38
        fdnG NONE
        fdxH NONE
CAP31_RS07135 NONE
        fdhE NONE
CAP31_RS07125 NONE
CAP31_RS07120 NONE
CAP31_RS07115 1400426 .. 1400436 -    -4  -3.12529   TTAACTGAACACACA                 CTAT GCC ATAG                 ACATCCATCAACAGA  49 80
        selB 1398363 .. 1398375 -  -4.8  -3.39521   TTCACCAAAACGGAA                GGGA TTCGC TCCC                CGGTGGGGCGGCCGG  52 115
CAP31_RS07100 1396605 .. 1396624 -    -7  -3.23452   ACTGGCAGAAGGGAA            GGCACGGC GGCA GCGGCGCC             TACTGTGGTGCCCAT  56 485
CAP31_RS07065 1388178 .. 1388191 -  -3.9  -3.69338   AATTAATTTTAATAA               TAGTT ATCA AACTA                AAAGACATAAACATA  54 46
CAP31_RS07060 NONE
CAP31_RS07055 1386795 .. 1386832 -  -4.3  -4.74706   GTCAACATGCAAAAA  TGGAATGCCTTGCCCGA AGTCTA TC-GGCA-GGCATTCGA   AGTCGCGGCTGCCGA  74 326
CAP31_RS07045 1384243 .. 1384264 - -13.1   -6.3578   AGTTTAAAAAAAAAA           CGGCTATCT GCGC AGATAGCCG            TTTTTATTTGTGCAG 100 47
CAP31_RS07035 1382469 .. 1382482 -  -5.3  -2.52003   GGATTATAACAAATT               CGTTT GATA AAACG                CTTACACCCACCCGC  47 27
CAP31_RS07030 NONE
CAP31_RS07025 NONE
CAP31_RS07020 NONE
CAP31_RS07015 NONE
CAP31_RS07010 NONE
CAP31_RS07005 1376293 .. 1376322 - -15.2  -2.53263   GTGATGCGGAATGGA       TGGTACGGACAA GGCTTG TTGTCCGTACCA        TGAGTGGGAGAGATT  90 39
CAP31_RS07000 NONE
CAP31_RS06995 NONE
CAP31_RS06940 1360881 .. 1360894 -  -2.3    -3.794   TTCTAATTTATTAAA               TGCCT GCTT AGGCG                TGATTGAACGATCCA  50 137
CAP31_RS06935 1360040 .. 1360055 -  -3.2  -4.52589   CCCGTTTACACAAAA              TCCAGG ACAC CCTTGA               TGGGGGACTGCGCGT  62 197
CAP31_RS06885 NONE
CAP31_RS06880 1348134 .. 1348149 -  -6.8  -3.65314   CCCAACGTTTAATAA              GCACCG ATTT CGGTAC               CTATTTTATTGAGTA  63 323
CAP31_RS06875 1347742 .. 1347767 -  -7.4  -3.30781   CTAACGTAAAGTTAA         GGGGCGGCGC GCTTTT GCGGCGTCCC          GCTTGAACGACGGGT  64 47
CAP31_RS06870 1347110 .. 1347134 - -11.4  -3.14522   CTAACGTAGAGCTAA         CCGG-CGGCGC TTTA GCGCCGTCCAG          CGACCGAAGGGAGCG  77 56
CAP31_RS06865 1346807 .. 1346831 - -11.4   -3.1479   ATAACGTAGAGCTAA         CCGG-CGGCGC TTTA GCGCCGTCCAG          CGACCGGAGGGAGCG  77 81
CAP31_RS06860 1346293 .. 1346327 -  -6.3  -3.75332   ATTTTGTAACGTAAA    GTTGAGGGACGCCACA CTTT CGCGGCGTCCCGCT-C     GAACGACAGGTTATG  64 49
CAP31_RS06855 1345245 .. 1345255 -  -2.4  -3.74693   CTTGACTGGACCAAA                 GCGC AAA GCGT                 TGTATTGCCAAATTT  51 305
CAP31_RS06830 1342268 .. 1342284 -  -2.9  -3.02144   GCAGGCCGGGCAACA              GCAGATG GTG CATGCGC              TAGAACAGGCGCAGT  43 25
CAP31_RS06825 1341751 .. 1341761 -  -4.6  -2.87132   GGCGGTTTTCAGACA                 GCCA GTC CGGC                 GAGATGGGGATCCAG  46 8
CAP31_RS06820 NONE
CAP31_RS06815 NONE
CAP31_RS06810 NONE
CAP31_RS06805 NONE
CAP31_RS06800 NONE
CAP31_RS06795 NONE
CAP31_RS06790 1334601 .. 1334623 - -14.9  -3.60296   CAGCCGGATTGCAAA           GGAGGCGCA TTGAT TGCGCCTCC           TTTTTTATGCTTCGC  95 58
CAP31_RS06740 1326070 .. 1326087 -  -4.1  -2.78816   GTATGCTGCAGGATA             TTTCCCG TCTG CCGGAAA              TCTTGCCTGCGATCT  43 104
CAP31_RS06685 1313158 .. 1313184 - -12.3  -3.14211   ATTCTCCTTGAGCAA        GGTCGC-CCCAC GGGG GCGGGCGCGACC         TGCCAAACTTACTTG  81 34
CAP31_RS06680 1312111 .. 1312127 -  -2.9  -4.45765   TGCAAAATCAAGAAA              GGGCATG GTT CATACCG              CCGTCAGGAATGACA  62 18
CAP31_RS06675 NONE
CAP31_RS06670 NONE
CAP31_RS06665 NONE
CAP31_RS06660 NONE
CAP31_RS06655 NONE
CAP31_RS06650 NONE
CAP31_RS06645 1304943 .. 1304956 -  -2.4  -3.72374   GTGCAGCAAGAAATA               CTTG AAAAAG CAAG                AGGCCGGCAGCGATG  51 347
CAP31_RS06530 1276494 .. 1276505 -  -7.2  -3.34043   CTCAGGAGGGTATAA                CCGC TCTG GCGG                 CAATTGAGGCCTCGG  59 310
CAP31_RS06515 1275125 .. 1275141 -  -2.1  -3.28712   CGCCGGCTTCGACAA              GGCACCG TCA CAGCGGC              GTTTGTTATTGATTC  44 344
CAP31_RS06495 1271114 .. 1271129 - -10.4   -5.4505   TTGGTCAATAAAAAA              GCCCGT CGAA ACGGGC               TTTTTTATTGCTTGC 100 47
CAP31_RS06460 1267032 .. 1267042 -  -4.6  -3.47184   AATCGAAGTCAAAGA                 GCCG TAT CAGC                 GACGTATCCTGAATA  51 86
CAP31_RS06455 1266038 .. 1266050 -  -3.4  -3.53444   TTACCCGTTTTGAAA                TGCA TGCGT TGCA                TGTTCAGTGATCCGT  51 145
CAP31_RS06450 1265393 .. 1265427 - -17.4  -4.11692   GAGGGACCTGCAAAA     GAATACGCTGCCATTT TAA AAACGACAGCGTATTC     TGATTTGTACAGAGA 100 50
CAP31_RS06445 NONE
CAP31_RS06440 1260776 .. 1260786 -  -8.2  -4.03085   TTATAAAAAGTTAAA                 GCGG TTA CCGC                 CCAGCAAGCAGCAAG  71 133
CAP31_RS06400 1253178 .. 1253228 - -12.2  -3.62096   GGGGACGATTTGAAA GCATAATTATCGGAAACGATGGA TGTTTT TCCATCGTTTCCGG-AATTATTC CGGTCTGCGTTTACA  88 45
CAP31_RS06390 1251434 .. 1251445 -  -5.8  -3.03124   TGTGATGTGTGAAGA                CAGC TGGC GCTG                 GCAAACAACAGGGGC  51 98
CAP31_RS06380 NONE
CAP31_RS06375 NONE
CAP31_RS06370 NONE
CAP31_RS06365 NONE
CAP31_RS06360 NONE
CAP31_RS06355 NONE
CAP31_RS06350 1238099 .. 1238111 -  -3.4  -3.34517   ACGCTGGTGGAAACA                CATG GCCGT CATG                ATCCCTGCGTCGGCA  46 188
        pdhA NONE
CAP31_RS06330 NONE
CAP31_RS06325 1230377 .. 1230408 - -15.4  -4.12188   TGATGACCGTCAAAA      TAAAAATCGCCATG ATGA CATGGCGATTTTCA       GGGTTGCAACAAACA 100 51
CAP31_RS06320 NONE
CAP31_RS06315 1227587 .. 1227598 -  -2.2  -3.52941   AAATTTTAATGATAA                GACA CTGA CGTC                 AGGCTGACGATATTG  47 4
CAP31_RS06310 NONE
CAP31_RS06305 NONE
CAP31_RS06300 NONE
CAP31_RS06295 NONE
CAP31_RS06290 NONE
CAP31_RS06285 1222332 .. 1222346 -   -10  -3.49618   CTGGCAGATAATCAA               TGCGTC GGC GACGCA               CAGCAAAGCTGCTGC  70 122
CAP31_RS06270 1220092 .. 1220111 -   -10  -5.80951   AGGGAAAATAAAAAA            GCCCTGCA TTTC TGCAAGGC             TTTATCTATCTGGCT 100 36
CAP31_RS06265 1219301 .. 1219315 -  -4.2  -5.40072   TTCGGCGTAAAAAAA               CCCCAC CGG GTAAGG               GTGGGTTTATGGGGC  83 67
CAP31_RS06260 1218236 .. 1218265 -  -4.9    -4.258   TCACCGAGGAAGAAA       GCGTTTCCTGAGA TGTA TCAGAGGTAACGC        ATTATTAATATCGAG  67 246
CAP31_RS06200 NONE
CAP31_RS06195 1207787 .. 1207798 -  -2.2   -3.5774   AGGCAACTGTGCAAA                CAGA CGGT TCCG                 GTTATCGTTTGTCGG  48 459
CAP31_RS06180 1205307 .. 1205325 -  -4.6  -2.89564   GTGCGATGCGATACA             TTTTCATG CGC CTTGAAAA             AGAATAGGGGATAGG  46 187
CAP31_RS06175 NONE
CAP31_RS06170 NONE
CAP31_RS06165 NONE
CAP31_RS06160 NONE
CAP31_RS06155 NONE
CAP31_RS06150 NONE
CAP31_RS06145 1197285 .. 1197299 -  -4.2  -3.14132   CTGGTCGTCCATGAA               CACGCA TAC CGCATG               GCAAGTGCCGGCGAT  47 304
CAP31_RS06085 1175352 .. 1175373 - -11.5  -3.29461   TAATCTGTCGCACAA           GCCAGCCAC CCGG GAGGCTGGC            TTGCTTTCTTTCTTG  77 120
CAP31_RS06080 1174430 .. 1174454 - -12.8  -3.06183   GCGATGTTGATGCAA          CGGCACCCGG ATTAA CCGGGCACCG          TCGATAGTGCTCATG  80 46
CAP31_RS06075 1173129 .. 1173152 -  -8.8  -2.81218   TGAAACAGGCGAAAG          CTGCTCTGGC CACT GCCAAAGCCG           ATGCTAAAGCCCAGC  60 468
CAP31_RS06060 NONE
CAP31_RS06055 NONE
CAP31_RS06050 NONE
CAP31_RS06045 1168927 .. 1168944 -  -4.1  -3.72576   CGGCCTCCGATGAAA             TCAAGCT CGAA AGCTGGA              AGCACAGATCGCCGC  55 120
CAP31_RS06030 1165299 .. 1165310 -  -5.8  -4.26903   GGCATGGGACGAAAA                GCCA GGGA TGGC                 AAGAATGACAGACCC  69 243
CAP31_RS06025 1164098 .. 1164118 -  -8.2  -3.06501   GATAGCCGCATGCAA            TGCGCGGG GATAT CCCGTGCA            TTGTGCCCCCTTGTT  63 463
CAP31_RS06015 NONE
CAP31_RS06010 NONE
CAP31_RS06005 NONE
CAP31_RS06000 1162386 .. 1162403 -  -2.7  -2.71712   GCTGGCGCCTGAAAG             GGTAAGGC GGT ACCTT-CC             ATGCTGCCGAGATAT  41 69
CAP31_RS05955 1150897 .. 1150913 -  -7.9  -2.89981   GATAAGGATAGCATA              GCCGCTG TCT CAGTGGC              ATATAAATAAAATGT  59 102
CAP31_RS05950 NONE
CAP31_RS05945 1148637 .. 1148647 -  -6.8  -4.02334   CAGCGACATGATAAA                 CCAG CAA CTGG                 TCGAGCATAAACGCC  66 337
CAP31_RS05905 NONE
CAP31_RS05900 1139161 .. 1139171 -  -4.6  -3.71649   TTCTTAAATTCTAAA                 GCCC ATG AGGC                 TTAGGTCATCACGCC  56 3
CAP31_RS05895 NONE
CAP31_RS05890 NONE
CAP31_RS05885 1137171 .. 1137185 -  -7.1  -2.79312   AAAGCTGTCATGACA               GGCGA ACCTA TCGCC               TTTGAGAAGAAAGGG  51 273
CAP31_RS05810 NONE
CAP31_RS05805 1119478 .. 1119509 - -13.8  -2.66216   GGGCATGATTATAAT      CTCGGCTGTACTGA CCTA TCCGTACAGCCGAA       CTGATTAAAGCCGCA  83 43
CAP31_RS05795 NONE
CAP31_RS05790 NONE
        hflX NONE
        hflK NONE
        hflC 1112324 .. 1112347 -  -5.2  -2.54371   TGCGGTAAATAAACC          GGACGCCA TTTTTATT TGGCGGCC           TTTGGCGATTTCATG  47 13
CAP31_RS05770 NONE
CAP31_RS05765 NONE
CAP31_RS05760 1109600 .. 1109634 - -17.2  -3.53012   GTTTTTTGGTCGAAA     TAAAAGCCGCGCTGGA AGA TCCGGCGCGGCTTTTG     TTGGGGATTTGATGC 100 44
CAP31_RS05725 NONE
CAP31_RS05720 1100606 .. 1100629 -  -2.2  -3.22298   TGGATTCAGGAGTAA          TCCGGGGGGG TGAG CCTTCCCGTA           CATGCGGCAAGGCTC  43 67
CAP31_RS05715 1097904 .. 1097924 -   -14   -3.5882   CACATGAGGGTGAAA            CCGGTGCG GTTTG CGCACCGG            GTAGGGTCGTTCAAG  93 36
CAP31_RS05700 1094300 .. 1094311 -    -3   -3.2505   TAAAGATTAATGGAA                TCAT GGAT ATGA                 AAATGAAGCGACTAA  45 56
CAP31_RS05695 1093789 .. 1093807 -  -3.8  -3.15544   CTGCATCCTGACGAA             CGCCAACA GTC CGTTAACG             GATTCGAAATCGTGC  47 135
CAP31_RS05685 NONE
CAP31_RS05680 NONE
CAP31_RS05675 1090948 .. 1090961 -  -3.9  -3.53091   ATTCGCGTTGGCAAA               TCAAA TGGA TTTGA                TCGTGCCTTTTGGCA  51 12
        secD NONE
        secF NONE
CAP31_RS05660 1087304 .. 1087320 -  -2.2  -3.43446   CGAGATCGAATAATA              CGGCAT CAACC ATGGCG              ACGGCAGGCCACGAT  45 14
         gph NONE
        ssrA 1086159 .. 1086173 -  -8.5  -5.52096   AAAGGCAATAAAAAA               CCCGC ACTTG GCGGG               TTTAATGGGTGTTAA 100 63
CAP31_RS05645 1084673 .. 1084698 - -11.3  -5.22006   GGATGACAATAAAAA         GGGTTAAATCA TTTC TGATCTAACCC          TTTTTGAATTGATTG 100 159
CAP31_RS05630 1081071 .. 1081084 -  -4.5  -3.79473   ATCATAATAGCGAAA               CCTGC TCGT ACAGG                GCAAGTGCTGATAGT  56 95
CAP31_RS05625 1077428 .. 1077444 -  -2.9  -3.40522   ACGCGCCTATCACAA              GGATTTC GTG GGAACCC              TGCGCGAGCAGGCAT  48 471
CAP31_RS05610 1074138 .. 1074161 - -18.2  -5.10461   TTCACGCAACAAAAA          GCCCCGAGGT AACC ACCTCGGGGC           TTTTTTATTTACGCC 100 44
CAP31_RS05590 NONE
CAP31_RS05585 NONE
CAP31_RS05580 NONE
CAP31_RS05575 NONE
CAP31_RS05570 1068554 .. 1068570 -    -3  -3.01915   TCCGCAGAAAAACAC              CAATTC GGCAT GAATCG              AGCGAGCCGGGTGAG  43 60
        acnA NONE
CAP31_RS05545 NONE
CAP31_RS05540 NONE
CAP31_RS05535 1060373 .. 1060391 -  -4.4  -2.72344   GTGCAGTTGCAAGTA             TCAGCGCA TTT TGCGCAGT             TTGTCCAATTTTGCC  45 7
CAP31_RS05530 1059399 .. 1059419 -  -6.7  -3.72576   TTCGCCGGCATGAAA            GGCCCGGTC AAG GACCGGCTC            AAACATTACGGGTTG  63 174
CAP31_RS05505 1053526 .. 1053548 -  -4.9  -2.83271   CCATTTTTATAATGA          TAGCACC-GG CTTG CCTGATGCTA           ATTGTTTTTTATCAG  49 23
CAP31_RS05500 1052110 .. 1052125 -  -2.5  -2.77222   ACCATGAGCGGAAAG              GGGTA TTTTAG CACCC               GTGACCGGGTTTCTG  40 51
CAP31_RS05495 1050867 .. 1050881 -    -5  -3.76952   TCGACCCAAGGTAAA               TCCCTT GGC AAGGAA               CGCTGGGCTGGGGTC  59 502
CAP31_RS05480 NONE
CAP31_RS05475 1047118 .. 1047128 -  -6.8  -4.91712   GGTAACTGAGAAAAA                 GCCT TAT AGGC                 AACGGACTTAGCGCT  85 309
CAP31_RS05470 1045472 .. 1045482 -  -2.4  -4.82667   TGATGAGATTAAAAA                 TCGC GAA GCGC                 TTCGGCTGAAGGATG  67 79
CAP31_RS05465 1045117 .. 1045144 - -12.7  -4.89521   AGAGTTCAAACAAAA        CCGCCCCGC GTTCATAAGG GCGGGGCGG         TATGTATTTAGACGA 100 58
         pnp 1042913 .. 1042960 - -28.8  -3.50572   AGTCACTGGACAGAA TGCAGGCAACAAAAAAGCAGCC AACT GGCTGCTTTTTTGTTGCCTGCT ATGGCTGCATTACTG 100 35
CAP31_RS05445 1041074 .. 1041089 -  -8.2  -4.10007   ATAACCTGTTTAAAA              CCGGCA AGAT CGCCGG               GCAGCATGATTAATC  76 80
        msrB NONE
CAP31_RS05430 NONE
CAP31_RS05425 1038121 .. 1038131 -  -8.2  -3.09933   CGCCAACGGACTGAA                 CGCG CTC CGCG                 TCCGCTTGCTGCGGA  60 486
CAP31_RS05410 1035251 .. 1035269 -    -3  -3.71848   TCCGGCCAGCAATAA             CATGGCGG CAA CAGCGATG             ACAATAGGTTTTGCA  52 68
CAP31_RS05405 NONE
CAP31_RS05400 NONE
CAP31_RS05395 NONE
CAP31_RS05390 NONE
        grxC 1029786 .. 1029823 -  -7.7  -3.42056   AGGCGCAAGTCACAA   CTCGATCTGCGATGC-CA AGG CGTGCAACGCAGAGCAAG   CCAGTTTTCGTTTGG  64 222
CAP31_RS05375 1028985 .. 1029004 - -13.6  -2.71364   TCACCTGCTCAAGGA            TCTGGCGG TCAG CCGCCAGA             TCCTGTGTATCACTC  75 265
CAP31_RS05360 NONE
CAP31_RS05355 NONE
CAP31_RS05350 1023158 .. 1023168 -  -2.4  -2.80816   TGCTGATTGACTATA                 CCCC ATG GGGT                 CATGACGTTTTCGGC  39 196
        hisD NONE
CAP31_RS05315 NONE
CAP31_RS05310 1014574 .. 1014586 -  -3.3  -2.67747   CTGCCATATTATAAG                CAACC TTT GGTAG                ACGGCATCACGCCAC  43 6
        hisH NONE
        hisA NONE
CAP31_RS05295 NONE
        hisI NONE
CAP31_RS05285 NONE
CAP31_RS05280 NONE
CAP31_RS05275 1011038 .. 1011059 -  -3.8  -4.11371   CAACAGTTCGGAAAA           GC-CAACAT CAAAC ATGTTGCGC           CTTATGCTTTGGTTT  59 27
        tatB NONE
        tatC 1009698 .. 1009709 -    -3  -5.00616   TTTTCGTTTAAAAAA                CAAT AGGG ATTG                 TTTTCTGCTAAATGA  72 146
CAP31_RS05260 1008212 .. 1008232 -  -4.6  -3.57144   GGCGCTAGGCGCAAA            GGCTCCGG TGTTT CAGGAACC            GTGGTTATGTGAGGT  54 224
CAP31_RS05225  999883 ..  999911 -  -8.1  -5.67063   GTTAGCATAAAAAAA        CGTCTATCCGCCA GCA CGACAGGTAGACG        TTCGGAAAAAGTACG 100 109
CAP31_RS05190 NONE
        lolA NONE
CAP31_RS05180 NONE
CAP31_RS05175  989923 ..  989940 -  -6.2  -4.07246   TTACGGCAAACTAAA             CGCCAC TGTTGT GCGGCG              TATTGAGCAAGGAGT  69 226
CAP31_RS05165 NONE
CAP31_RS05160  987860 ..  987876 -  -3.7  -3.54741   TATCATTGGTTCAAA              TTAAAGC ACT GCATTAA              ATACATAGCCAACGA  51 9
CAP31_RS05155 NONE
CAP31_RS05150  987234 ..  987262 - -11.6  -3.59979   TTCGGTGACTGTAAA        CGGCGAGTCGGC TTCGT GTCGGCTCGCCG        ATCTTGAGCGTGCTT  86 51
CAP31_RS05145 NONE
CAP31_RS05140  985590 ..  985606 -  -4.3  -4.04206   GCATGTGCAGATAAA              TCCGCGC ATG ACGCTGA              TGTTCTGCGATTTTG  61 402
CAP31_RS05120 NONE
CAP31_RS05115 NONE
CAP31_RS05110  980901 ..  980919 -  -3.1  -3.92996   TTTCACACAGAATAA            CTGCGCAG TTAT CCGC-CAG             CATATTTCACACTTA  54 38
CAP31_RS05105 NONE
CAP31_RS05100  979582 ..  979605 - -15.4   -2.5955   ACGGGTGAGAATGGA          TCGGCCTATG AGAT CATAGGCCGA           TGGCCTTTGGTGTCA  90 44
CAP31_RS05090 NONE
        amrS NONE
CAP31_RS05080  975359 ..  975371 -  -6.9  -3.02211   CAACTGGAAACCATA                CGCAG GCG CCGCG                CCCAATATACTCCGA  53 486
CAP31_RS05035  969229 ..  969243 -  -4.2  -4.18018   TTCCTTCACGGAAAA               CAAGGT ATT ACCGTG               AAGGTGGCAAGGCAA  61 42
CAP31_RS05030  966967 ..  966980 -  -4.5  -2.54325   CCTGGGCAAAGACAG               CCTCGC TCA GCG-GG               AACAGCGTGCAGAGC  44 103
CAP31_RS05025  966071 ..  966087 -  -2.9  -3.79747   TTATTCACGAGCAAA              GCATCAG AAC CAGATAC              GCACACCCGCAACCA  52 12
CAP31_RS05020  965306 ..  965318 -  -5.5    -4.371   GGCATCAGATCAAAA                TCGGC GAA GCCAA                CAGTGGCCTGCATGG  70 134
CAP31_RS04960 NONE
CAP31_RS04955  950171 ..  950181 -  -8.2   -2.5919   GAGGATATGAAGCCA                 CCCG CGC CGGG                 CGTGATAGTTTAAAT  61 79
CAP31_RS04925  941494 ..  941505 -  -7.2  -2.87132   CGCGTTGCTGATAGA                CGGC TGCG GCCG                 TACCGATTTCCAGAA  54 422
CAP31_RS04900 NONE
CAP31_RS04895  934507 ..  934532 - -14.8  -5.37593   GCTGAAATTAAAAAA         TCCTCTGGCC GGAGGA GGCCAGAGGA          TTTTCAGGTTGGTGC 100 52
         acs NONE
CAP31_RS04885 NONE
CAP31_RS04880 NONE
CAP31_RS04875 NONE
CAP31_RS04870  925868 ..  925896 -   -14   -4.2204   AATCTGAATAAAGAA        CCGGGATGAATA AGCTG CATTCATCCCGG        CTATAGGACGAGCGG 100 45
CAP31_RS04865 NONE
CAP31_RS04860  923925 ..  923942 - -12.7  -5.86061   GGGCAGTAAAAAAAA             GCGGCGT ATAA ACGCCGC              TTTTCCCGTTAAGCT 100 47
        rpoE NONE
CAP31_RS04850 NONE
CAP31_RS04845 NONE
CAP31_RS04840 NONE
CAP31_RS04835 NONE
CAP31_RS04830  919533 ..  919549 - -12.3   -5.4833   TCATTCAATAAAAAA              GGCACAC GCT GTGTGCC              TGAAGCAGCTTGATA 100 51
CAP31_RS04825 NONE
        lepB NONE
CAP31_RS04815 NONE
CAP31_RS04810  915767 ..  915783 -  -2.2  -2.60075   TGTTGTTCAACCAAC              CCTGAC AGCGA GTCAGC              TGATTGATAGGCGAC  39 52
CAP31_RS04805 NONE
CAP31_RS04800 NONE
CAP31_RS04795 NONE
CAP31_RS04790 NONE
CAP31_RS04785 NONE
CAP31_RS04780 NONE
CAP31_RS04775 NONE
CAP31_RS04770 NONE
CAP31_RS04765 NONE
CAP31_RS04760 NONE
CAP31_RS04755  905053 ..  905079 -  -8.1  -3.10112   ATCGAATTGAGTTAA        GCGCATGGC-TGA TAG TCATGCCA-GCGC        CTGCCGTAACGTGAT  63 14
CAP31_RS04750  904296 ..  904315 -  -2.8   -4.2679   GAACGCGGATTAAAA            GGGCAGGCT ACC AGC-TGCCG            CTGTGGATGCGATGC  60 13
CAP31_RS04745  902586 ..  902603 -  -6.9  -3.57462   CACGCGATTTCGAAA             GCGGCAG TCAC CTGCTGC              TGTTCCCTGAGGGGA  60 395
        rbcL NONE
CAP31_RS04715  896540 ..  896575 - -12.7  -4.10781   AACAACTCACAGAAA   CAGAGGCCTCCGC-CCC TTGC GGATGCGGAGGCCT-TG    TGACGGTTCAACAGT  95 50
CAP31_RS04710  895713 ..  895723 -  -2.4  -3.15743   TATGACTAAAAGAAT                 GTCG TAA CGGC                 TGCATCCAGCGCATC  43 5
CAP31_RS04705 NONE
CAP31_RS04700  892906 ..  892916 -  -2.4  -3.94933   GCAACGCTAAAAATA                 TCGC GTT GCGT                 TTGCAGGCCGAACTG  54 122
CAP31_RS04690  891012 ..  891025 -  -9.5  -2.83112   ACTGAATCCATGATA               CGGGC GATA GCCCG                GCAAGCCGAGGCGGA  63 311
CAP31_RS04680  889602 ..  889649 - -13.6  -3.53811   TCGATCGGTTTGAAA CGGCAATC-GGCGAGATTCCAGA AGT CCTGGAATGTCTCCTGATTACCG GGCAGGATGCGGATT  82 211
        leuA  887391 ..  887405 -  -5.6  -3.41414   AAAGCATATCCATAA               GCCGCA TCG TGCCGC               GAACCTAATAAAATA  56 127
CAP31_RS04665 NONE
CAP31_RS04655 NONE
CAP31_RS04650 NONE
CAP31_RS04645  883475 ..  883490 -  -3.2  -3.74089   ATTAGAACATAAACA              GCATGC TGAT GTATGC               GCTTATTGACCGGTT  52 28
CAP31_RS04640  883176 ..  883221 - -17.2  -2.59837   ACTGGAAATTAACAT TGCATCTGCGGTTTAATCATG AAATG CA-GATTAAACCGCAGGTGCA GGCAAAACGCTAGCG 100 42
CAP31_RS04635 NONE
CAP31_RS04535 NONE
CAP31_RS04530 NONE
CAP31_RS04525 NONE
CAP31_RS04520  859540 ..  859575 - -17.9  -3.57462   TATCCGATCTGTAAA    CATAAAGCCCAACAT CGAAGT ATGTTGGGCTTTATG     TTTGCTTGATGATGC 100 67
CAP31_RS04515 NONE
CAP31_RS04510 NONE
CAP31_RS04505 NONE
CAP31_RS04500 NONE
CAP31_RS04495 NONE
CAP31_RS04490 NONE
CAP31_RS04485 NONE
CAP31_RS04480 NONE
CAP31_RS04475 NONE
CAP31_RS04470 NONE
CAP31_RS04465 NONE
CAP31_RS04460  847184 ..  847205 - -10.1  -5.37345   CGGAATGATAAAAAA           GAGGGCGTC CGAG GACGCCCTA            AATACCGCATGGAGG 100 213
CAP31_RS04455  844858 ..  844870 -  -6.9  -3.14931   GGGAGCGTTTACGAA                GCGCC GCT AGCGC                CTGATGTTACAGTTA  54 360
        cysQ  840370 ..  840396 - -15.9  -3.72743   CACCAGTAAAATTAA         CGGCCAAGAGC TCAAT GCCCTTGGCCG         TTTTTCTATTGCGGT 100 340
CAP31_RS04410 NONE
CAP31_RS04405 NONE
CAP31_RS04400 NONE
CAP31_RS04395  832187 ..  832201 - -11.4  -3.64703   GTCTGGTCAGTGAAA               GCAGCG ACG CGCTGC               TGGGCAATGCCGACG  77 410
        tsaD  829181 ..  829206 -  -2.5  -3.03124   GCGCATGTCCGAACA         CCGCAAGGA TGTGATGT TCCTGGCGA          TGCGTTACTGGGGCG  41 215
CAP31_RS04365  827036 ..  827062 - -15.2  -6.07374   ATAAAAAACAAAAAA         GCCCAGCTATCA ACT TGATGGCTGGGC         TTAAATTATATTAGA 100 60
CAP31_RS04360  824893 ..  824912 -  -4.8  -3.44284   GTTCCACGAAGAAGA            CCTGCGCG TGTT CGAGCCGG             AGCACGTGCGCTTCG  52 442
CAP31_RS04350  821818 ..  821837 - -10.7  -5.47159   TTTGAAGACAAAAAA            GGGCAGG GTTAGG CCTGCCC             TGATACAACTGTGGT 100 40
CAP31_RS04345  819584 ..  819604 - -11.2  -5.63517   GTTCCAAATAAAAAA            GCGCAATC GATTT GATTGCGC            TTTTTTATTGCGAGT 100 46
CAP31_RS04330 NONE
CAP31_RS04325 NONE
CAP31_RS04320 NONE
CAP31_RS04315 NONE
CAP31_RS04310  811916 ..  811926 -  -2.4  -3.63569   CGAATTGGGCAAGAA                 GCTG CAT CTGC                 GCCACCTCAGCCCGG  48 172
CAP31_RS04300 NONE
CAP31_RS04295 NONE
CAP31_RS04290  806147 ..  806167 -  -4.7  -3.52519   ATGACTTATAAAAAT            CAGAAAGAT AAA ATCATTCCG            TCATGGAAACATGGA  56 98
CAP31_RS04285 NONE
CAP31_RS04280 NONE
CAP31_RS04275  803285 ..  803315 - -11.8  -3.28472   CCGGACTAAAAATCA       TGCCGACGCCAGCC GTA AGCCGGTATCGGCA       CACACATCTGACAGC  79 70
CAP31_RS04255  800144 ..  800173 - -11.5  -2.80935   ATTTGATCCAGTACA       CGCTGGCCATCGAC CGT GCCGATGAC-AGCG       TCGCCTATTTGTACG  69 324
        trmL  794263 ..  794273 -  -3.2  -3.70463   TAATAAGATAAAAAC                 CCTG GGT CAGA                 CGCCGCCGGCGTATC  52 21
CAP31_RS04215  793465 ..  793484 -  -9.4  -4.25104   TCTCCTTGAGTAAAA            GATACCAA CCAT TTGGTATC             TTAAAAATCGATACC  83 127
CAP31_RS04210  792423 ..  792463 - -17.5  -4.57073   CAGCCCGTCGAAAAA  TCACTTCGCGCCCGCGCAC TCG ATGCGCTGGCGCGGCGTGA  GCATACCCGTACCGA 100 473
CAP31_RS04145 NONE
CAP31_RS04140 NONE
CAP31_RS04135 NONE
CAP31_RS04130  780470 ..  780518 -  -7.3  -3.95324   CATGGTGAAGAAGAA GCTGCCGCCCGCAACAAAATTTC GTC GATAGTTTGCCGTGGGAGGCATC GTAGCAGAGGGTGGT  68 128
CAP31_RS04110  778467 ..  778482 -  -4.7  -2.51849   GAAGAAGTTAAAATG              GTACG TAAATG CGTAC               GCAATGTCAAATCCG  47 80
CAP31_RS04105 NONE
CAP31_RS04100  777745 ..  777757 -  -7.7  -2.94924   CGGTCATCGAGAAAT                TCAGC TTT GCTGA                TATCAACAAGGCAAT  61 204
CAP31_RS04085  776125 ..  776137 -  -3.3  -3.15544   GTTCACGGCTAGTAA                CAGCC GTT GCCTG                ACGACGACCAGCTTT  47 6
CAP31_RS04080 NONE
CAP31_RS04075 NONE
CAP31_RS04070  772658 ..  772675 -  -2.7  -4.46112   CGGGACTGAAATAAA             CGTACGCT GGC AGC-CACG             GTATCAGCGGGGGTG  62 191
CAP31_RS04065  772228 ..  772250 -  -4.7  -4.65895   CGGCTGATTGAAAAA           TGGGCAGCC TCTTC GACCGCCCG           ACTCAACCATGTCTT  72 82
CAP31_RS04060  770065 ..  770079 -  -2.8  -2.64912   GCGGGAATTCACAAG               TGAATG AAC CAGTCA               GATCAGTTAACTATC  41 36
CAP31_RS04055  769424 ..  769451 -  -5.4  -3.36803   CAAGCGCATCGACAA        GGCCTTGGCCAG CCGG CTGCCCGACGCC         GATGGGGAAGCGGGA  52 75
CAP31_RS04045 NONE
CAP31_RS04040 NONE
CAP31_RS04035  766681 ..  766691 -  -6.8  -4.41047   ATCCGTGAAGCAAAA                 CAGC GCG GCTG                 TTATCTTGAACTCAA  74 288
CAP31_RS04020  763352 ..  763369 -  -4.7  -4.07687   ATGCGGGCGTCAAAA             CAGCGGC AGCG GTCGCCG              AAGCTTGTGCGATGC  64 45
CAP31_RS04015  761919 ..  761940 - -10.1  -2.78715   AAGTCCTGCAGCAGA           TCAGCCTGC CGCC GCTGGCTGA            AGAAGCGTTGCTGCA  63 221
CAP31_RS03990 NONE
CAP31_RS03985 NONE
CAP31_RS03980  751692 ..  751709 -  -4.9  -3.02461   TAACGCGTGCGAATA             CCTGAGTA AAC TACTC-GG             ATAAGGCGCGGTTGA  50 18
CAP31_RS03975 NONE
CAP31_RS03970 NONE
CAP31_RS03965  749800 ..  749817 -  -3.5  -2.90901   AGAGCCGCAATTATA             CTGGATTT CAC AAATCC-G             TCAAGAAAGTAAATG  44 53
CAP31_RS03960  749676 ..  749695 - -12.2  -5.65927   GATGGAAATAAAAAA            GGCTTGCA TCGC TGCAAGCC             TTGTTTTCTGGTGGG 100 34
CAP31_RS03680  712189 ..  712204 -  -4.6  -5.12172   GATGAACAAAGAAAA              CGCGCA AAGC CACGCG               GTTATTGAATTACAC  79 142
CAP31_RS03670  709305 ..  709325 -  -2.6  -4.56597   TGGTGTGGTTAAAAA            CAGTTAAG CATAC CTTAAATG            ACAAGGCGTACCAAC  65 127
CAP31_RS03665  708061 ..  708091 -    -4  -2.98265   AGAAAGACACGAAAT       GCACAAAAAGACTT CAC AATTCTTTATGGGC       GGCTTTCAATTGCAG  47 143
CAP31_RS03660 NONE
CAP31_RS03655 NONE
CAP31_RS03650  705547 ..  705570 - -12.6  -2.52464   CGCCCGGCCAACTTA          CGATACTTTC GGGA GAAAGTATCG           TTGGTTTCAATATAG  78 191
CAP31_RS03645 NONE
CAP31_RS03640 NONE
CAP31_RS03635 NONE
CAP31_RS03630 NONE
        cpaB NONE
CAP31_RS03620 NONE
CAP31_RS03615  700169 ..  700179 -  -6.8  -2.55351   CTGCTGGATATCAAG                 GGGT GGT ACCC                 GTGCTGGTGCTCGTA  55 10
CAP31_RS03610 NONE
CAP31_RS03605 NONE
CAP31_RS03600  697669 ..  697687 -  -3.9  -2.79183   TTTATTCTGATTATA             GAGAATA GCCCA TACTCTC             TGCCGGCATGACTAC  44 2
CAP31_RS03595 NONE
CAP31_RS03590  694995 ..  695014 -  -4.2  -3.41979   CGAATAAATAATAGA            GGTAATCC ACGT GGATCTCC             TACTCGTATAACTGG  51 25
CAP31_RS03585 NONE
CAP31_RS03580 NONE
CAP31_RS03575  691884 ..  691916 -  -3.7   -4.1711   ACTACGGCCAACAAA     CAATATACTGATTC GGTGAA GAATCAAT-TATTG      CTATCTCTCATTGAA  59 26
CAP31_RS03570  691535 ..  691545 -  -6.8  -3.78953   ATGGCCATTATCAAA                 TGGC CAT GCCA                 GTGTTGCAGGATAGT  66 59
        mutS NONE
        rsgA  687791 ..  687820 - -12.2  -3.36569   GTAATCCTGTAAAGA       CAGGATGAGCAG CATATC CGGCTCATCCTG        CAATCCCCGCAATAC  85 53
CAP31_RS03510  680146 ..  680163 -  -2.7  -4.97405   ATCCATAAAAACAAA             GCTGCTCG CCA CAAG-AGC             CGTTTGTCTGCTGCT  74 194
        mviN  678204 ..  678220 -  -3.6  -3.18264   TGCTTCAGCCATCAA              TCAGGC TGCAC GCCGGA              TGAACTGGCGCGCGC  47 9
        ribF NONE
CAP31_RS03490 NONE
CAP31_RS03485 NONE
CAP31_RS03480 NONE
CAP31_RS03475 NONE
CAP31_RS03470  672007 ..  672029 -  -3.6  -3.45571   TTTTGTAAATATGAA           TTTATATAAA TTT TTTATAGAAA           ATAAAGAAAAATCAT  49 176
CAP31_RS03465  670436 ..  670456 - -16.1  -3.61517   AGGGGCTTTTAACAA            CCCGCCGCC AGC GACGGCGGG            TTACCTGGGGTACGA 100 42
CAP31_RS03460 NONE
CAP31_RS03455 NONE
        pstS  665970 ..  665993 - -12.5  -5.93809   GCGGCATAAAAAAAA          CACCACCTG ATACGG CAGGTGGTG           TTTAGTACTGCGGTG 100 57
CAP31_RS03445  665087 ..  665099 -  -3.3  -4.87291   CAGGGTAAGCAAAAA                GGCGA ATG TGGCC                GAACAATACAGGATT  74 359
CAP31_RS03405  659587 ..  659598 -  -3.6  -4.20084   AGGAGGGACGGAAAA                CCCG CCTT CAGG                 GCTGAGCTTCCGTAT  62 21
CAP31_RS03370  651758 ..  651777 -  -6.4  -3.05384   GCTTTGGTGAGGTAA            TGCCGG TTTAAACG CCGGCA             GATTCCGGGCAATCC  55 13
CAP31_RS03270  635080 ..  635093 -  -8.1   -3.1552   TTGGATTGAGCAATA               CACGC GCGC GCGTG                AATCTCAGAACGTTC  65 473
CAP31_RS03235  629686 ..  629723 - -15.7  -2.88758   ATAATCGCTGAGACA   CCTGCATCATTCGGTTC GTTT GAGCTGAATGATGCAGG    TGTTGTGTTTGAAAA  93 62
CAP31_RS03205 NONE
CAP31_RS03200  622944 ..  622960 -  -5.8  -3.82442   CGAATACAAAATCAA             CGCGCCG GTAT CGGCG-G              ATCAGTTCATCGGGC  61 435
CAP31_RS03090 NONE
CAP31_RS03085  603877 ..  603889 -  -3.3  -4.63218   TGGTGCGCAACAAAA                CCGAC CGG GCCGA                TGCCGCGCTACTCGC  67 326
CAP31_RS03055  601247 ..  601302 - -10.8  -3.55563   ATGGTACGGTGCAAA GCGTTGCA-CGTACCG-GTGTAT-AACG CGAG CGTTGATGCACACGGT-CGATGCAACGC TTTGGTTTATTCATA  79 88
CAP31_RS03035  596669 ..  596687 -  -5.2  -3.07816   GGTGTATTTACCTAA             CATGGCTG ATA CAGCAACG             AATTAACGTGACCGC  50 28
CAP31_RS03030 NONE
CAP31_RS03025 NONE
CAP31_RS03020  593791 ..  593811 -  -3.2  -3.78877   TATGAGAGCAAAATA            GTACGGCT GAGCA AGCCGCAG            CCCTGGAAAATTACG  53 385
CAP31_RS02915 NONE
         nth  572028 ..  572044 -  -3.6  -3.01712   GTGCCTGTGGCAAGA              CCGGTG GCTAT CATCGG              TTATTGACGGTTTTA  45 19
CAP31_RS02905 NONE
CAP31_RS02900  570382 ..  570393 -  -3.6  -4.63218   TCTGCTGGAACAAAA                GACG GGAG CGCC                 ACAACAACAGCACTG  69 164
        pstS  553071 ..  553098 - -15.7  -3.06492   GTATGCATTGCAAGA        CTAAGGGGGAG ATTGCG CTCCCCCTTAG         TCTGGTTTGGTTACA  93 66
        pstC NONE
        pstA NONE
CAP31_RS02790  550397 ..  550422 -  -7.6  -5.06816   ACTGCTTAATAAAAA         CGCGATGTCC GGCAAG AAACATCGCG          TTTTTATTTGGAGTC  88 53
CAP31_RS02765  544811 ..  544838 -  -3.3  -3.51161   CAAATTGGCAGACAA        GCAGCTGG-CAG GAAAT CTGGCCGGCGGC        ATGTTTACGGTGATA  48 342
CAP31_RS02735  534914 ..  534927 -  -5.9  -3.60296   TATCGGGACGTTAAA               GCCGG GTTC CCAGC                TTTTTGGCCAATTCC  58 7
CAP31_RS02730  533758 ..  533803 -  -5.9  -3.75153   CCCCGTTAAGCGAAA CGCAGGACGAGGCCTGGGAAGG CTG CCTATCC-GTCCCCGGCATGCG CGGCCTGGTGCCGCG  61 252
CAP31_RS02710  530236 ..  530248 -  -4.8  -2.61264   CGCTCCAGGCATAAT                CGTC GATCT GACG                CAGCGTTTACCTGAT  47 32
CAP31_RS02675  523393 ..  523404 -    -3   -2.5038   CCTAAAAACTAAATG                CTTT TTTA AAAG                 AGATAATTAGGCGTT  40 32
CAP31_RS02670 NONE
CAP31_RS02665 NONE
CAP31_RS02660 NONE
CAP31_RS02655 NONE
CAP31_RS02650  520005 ..  520039 - -13.8  -3.58726   GGGTTTGATATAGAA    GCGA-TGGTGTCGAT GCCATT ATCGACACCACTCGC     AGAAAGCTGAATCGC  93 122
CAP31_RS02630 NONE
CAP31_RS02625  517777 ..  517793 -  -6.5  -4.43189   ATTAAGTTTATAAAA              CGGGTCA GGT TGACCAG              TTAATCTATATGTAC  75 282
CAP31_RS02620 NONE
CAP31_RS02615  515668 ..  515689 - -13.7  -3.30124   TTTGAGCGGTGACAA           TGCCCGCCA TTTT CGGCGGGCA            TGATGGTCACACTTG  90 32
CAP31_RS02610  514997 ..  515037 - -20.6  -2.88427   AATATTCGCCATATA  GGCAAGGGTGCGGGGTTA AACAA CAACCCCACACCCTTACC  AGAGCTTAGGCCGTT 100 266
CAP31_RS02600  511191 ..  511207 -  -6.5  -5.03314   GGCAGGCGTAAAAAA              CCCGC TGGTGAG GCGGG              TAAGTGGGTTATAGG  83 34
CAP31_RS02595 NONE
CAP31_RS02590 NONE
CAP31_RS02585 NONE
CAP31_RS02580 NONE
CAP31_RS02575  508956 ..  508975 -  -9.2  -5.55769   CTGCACAAGAAAAAA            GCCCGTCA TTTC TGGCGGGC             TTAATGCTCTTGAAA 100 86
CAP31_RS02560  505154 ..  505190 -  -6.5  -4.57353   CCTGACCATAGAAAA    GACGCTGCGGCAATATT TCG AAGATCGCCGCAAGGGC    GAGTTCGGATTCCAT  76 72
        folB NONE
CAP31_RS02500  495878 ..  495891 -  -5.9  -3.74693   TGGTATCTGATCAAA               CGCCG TGCA CGGCA                GGTAGGATTGACGAA  61 218
CAP31_RS02480  491739 ..  491757 -  -9.6  -2.73771   CGATAGGCCGCAAAT             TACGTGGA TTA CCCACGTA             TGTGCCCGTCGCCGA  68 15
CAP31_RS02475 NONE
        rsfS NONE
CAP31_RS02465 NONE
CAP31_RS02460 NONE
CAP31_RS02455  487958 ..  487972 -  -4.9  -2.82516   TGCTCTACGACGACA               GGCAG GGGAG CCGCC               AGGGATTCAGTCTGG  44 198
CAP31_RS02425 NONE
CAP31_RS02420  480064 ..  480081 - -10.5  -3.18452   CGCGGAAATAAATGA             GCGACGC CGCA GCGCCGC              AAATTCAATTTCAAA  74 36
CAP31_RS02405  477708 ..  477719 -  -5.8  -2.83747   CAAGCGCGAGAATTA                CAGC TTTG GCTG                 GAGCAATGCGATGAT  49 252
CAP31_RS02390 NONE
CAP31_RS02385  475249 ..  475259 -  -2.4  -3.60475   AATGTGCAGGTTAAA                 TGCG GTA CGCC                 TATGCTTTCAAGCAA  47 95
CAP31_RS02380  471297 ..  471331 -  -9.3  -3.27525   CGCTCGGAAATTCAA    CCAGCCAGAG-CAGCA TATG CACCGACTCCGGCTGG     TGCACGACTATAACA  68 33
CAP31_RS02345 NONE
CAP31_RS02340  462269 ..  462280 -  -2.2  -3.57144   GTTCGCAGGGTGAAA                GACA CGTT TGCC                 GCACCTACTTACGTA  48 162
CAP31_RS02325  459884 ..  459911 -   -15  -4.61231   GCATACCCTGAAAAA        TAAAGGGGTGAC AATC GCCACCCCTTTA         TGGACTGCTAAAATG 100 63
CAP31_RS02320 NONE
        ccsB  456643 ..  456681 - -30.6  -3.55444   GGCGGAGGTGGGAAA   CAGAAAGGGCGGACTGGT TAA ACCAGTCCGCCCTTTCTG   TTTGAGATTATCTGC 100 46
CAP31_RS02295  453515 ..  453525 -  -4.6  -2.57795   TGGATGATTAAGTTA                 GGGC CAG ACCC                 GGTTTCATGATGTTT  44 143
CAP31_RS02290 NONE
CAP31_RS02285 NONE
CAP31_RS02280  452137 ..  452147 -  -6.8  -3.93369   TGAATTTGAATTAAA                 TGCC AAC GGCA                 AGGAACTTGGGGTCG  68 10
CAP31_RS02275  449908 ..  449941 -  -8.4  -4.14392   CGCTAACGTGTAAAA     GGATGTTTTTCA-AG ATCTG CTATGAAAAACACCC     TTTATAAACAACGTT  76 39
CAP31_RS02270  444102 ..  444132 - -21.3  -3.53012   GGTCTTTTTTCCAAA       CGACAATGCCCGC GAAAA GCGGGCATTGTCG       TTTGCTTCGCCTGGA 100 41
CAP31_RS02255 NONE
CAP31_RS02250 NONE
CAP31_RS02245  438543 ..  438570 - -11.9  -2.52543   ATTTTGCCGAAGTTA        GCCGTGCCGCC CTTGCC AGCGGCGCGGC         GTTACAGGTAAACAG  70 188
CAP31_RS02230  435485 ..  435499 -  -2.1  -3.57144   TGGTGCATCCGGAAA              TG-CCG GAAT CGGACA               GCGCATTGCCGCAGT  47 61
CAP31_RS02215  430515 ..  430531 -  -7.9  -2.52464   TTGCGCGCGAATGGA              CTGGCGC TGG GCGGCAG              CCTGGATAATGCGAT  53 516
CAP31_RS02075 NONE
CAP31_RS02070  404774 ..  404812 -  -3.7  -3.45849   TTTAGACGATGAGAA   TGATGGGGACAGTGCGG ATTAG CTGCGCCATCGCCACCA   TCGTGCTGATAGTTT  49 67
CAP31_RS02065 NONE
CAP31_RS02060 NONE
        trpD NONE
        trpC  400543 ..  400560 -  -9.1  -3.06261   GCTCAACGTTTAATA             GACACCG ATTT CGGTGCC              TGTTTTATTTAGTAA  67 352
CAP31_RS02035  399030 ..  399044 -  -5.6  -2.64099   TTTTCTCATGAGAAG               CGGGCT CAT AGCACG               AATTGATGATGGCGT  49 188
CAP31_RS02030  396646 ..  396663 -    -7  -3.59979   CCCTGGCAGGGGAAA             TACCGC CGCAAT GCGGTA              GTGCATGCAAAGTGG  60 388
CAP31_RS01965 NONE
CAP31_RS01960 NONE
        pdxA NONE
CAP31_RS01950 NONE
CAP31_RS01945 NONE
CAP31_RS01940 NONE
CAP31_RS01935  373585 ..  373628 - -17.8  -4.72272   CTGGTCCATGAAAAA CACGAAGGCACGAAAAGTATA TTG CAT-CTTTTCGTACCTTCGTG TTTTTGGTGGATGGC 100 57
CAP31_RS01805  346970 ..  346991 - -15.9  -2.84098   CTTGTCAAGCAATGA           GCGACGGTG CCTG CACCGTCGC            AAATGATGCTTACTT  93 35
CAP31_RS01800 NONE
        pilB NONE
CAP31_RS01790 NONE
CAP31_RS01785 NONE
CAP31_RS01780  341047 ..  341061 -  -2.8   -2.6162   TAAGTTGGCAAATAC               TAATGC GTA GCATGA               AAACTTTGCGCCTGG  41 10
CAP31_RS01775 NONE
CAP31_RS01770  339952 ..  339973 -  -5.2  -3.14132   GGGTGTGGTGACGAA           CGGACTGTT TGCGC AAC-GTCCG           GCAGATGTGTTGTTG  50 87
        ilvA NONE
CAP31_RS01755  335728 ..  335743 -  -5.4   -3.6715   TCAGTGAAGCGGAAA              TCGACC AATT GGTCAA               CGGCAGCCTGATTGC  56 65
CAP31_RS01745  333994 ..  334007 -  -5.3  -3.97057   GATAATGTAATTAAA               TGTTG CTGT CAACA                AAAGCGGTGAGTTGT  61 7
CAP31_RS01740  332562 ..  332580 - -11.7  -3.16742   TTGAAGCCGGATTAA             CCGCTGG GGACG CCAGCGG             TTAATTCAACAAGTG  79 49
CAP31_RS01730  330829 ..  330859 -  -6.8  -5.00616   CGGCGCTGGAAAAAA       TACATGCCGAGGTG CAT CAGGTCGGCATGGA       AATCGTGAGCTTAAA  84 197
CAP31_RS01690  321896 ..  321914 -  -4.4   -3.4398   CTTCAATGCAAAAAG             CACGGCCA ATT CGCCCGCG             ACACTATAGCGACCG  51 122
CAP31_RS01685  320936 ..  320962 - -13.1  -4.25074   GATTAAATCGCAAAA         CACACCAGCCT TGATC AGGCTGATGTG         CTTGAGGGCCGAGAT  95 53
CAP31_RS01670 NONE
CAP31_RS01665  314716 ..  314734 -  -4.5  -3.55761   CACGCAGGCTGGAAA             CGGCTGA TGAGT TCATCCG             ATTAGTTCGCTCCCA  53 27
CAP31_RS01655  313686 ..  313712 -  -5.9  -5.00138   GATTTAAAGCAAAAA        CA-GGGAGGG GATGGACT CCCTCCCGTG         AAGCTTATTTCATGT  80 30
CAP31_RS01585 NONE
CAP31_RS01580  298746 ..  298758 -  -4.7  -2.93422   AGCAAGCACAACAAC                CGCTG GAA CTGCG                CAGGCACGCTGGTTA  46 143
CAP31_RS01540 NONE
CAP31_RS01535 NONE
CAP31_RS01530 NONE
CAP31_RS01525  287773 ..  287783 -  -2.4  -3.28712   TTTCCTTCTTGATAA                 TCCG GGC CGGC                 GGCCTATTGTGTAAT  43 29
CAP31_RS01520 NONE
CAP31_RS01515 NONE
CAP31_RS01510 NONE
CAP31_RS01505  283966 ..  283985 - -10.7  -3.57144   TTGCGTATGGCTAAA            GCCAGGC ATGATG GCCTGGC             TTTATATCGGCTCGG  79 41
CAP31_RS01500 NONE
CAP31_RS01495  279691 ..  279708 -  -5.5  -3.66999   AGCGATGCAGTGAAA             CAGCGCA TCGA TGCGATG              TGGCAGGAATTGGGG  61 313
        rsmI NONE
CAP31_RS01455  274143 ..  274155 -  -4.8  -3.02144   CGATGCTGCCGAACA                TGCC TTTGT GGCA                GTCGGGCGGCCGCGG  50 129
CAP31_RS01450 NONE
CAP31_RS01445 NONE
CAP31_RS01440  271399 ..  271411 -  -5.5  -3.57144   GTTTGCATGTCGAAA                GCGAC AGT ATCGC                GCTGGATACCGGCTG  58 58
CAP31_RS01430  268162 ..  268182 -  -5.3   -5.0538   CGGCATTGCAAAAAA            GCAGTCGTC TGG GACGGGTGC            ATTAATGCGCGTGCT  78 520
CAP31_RS01405  264823 ..  264848 - -13.3  -5.66684   CAATTCATAAAAAAA         GCGCCCCGATC CTGT GATCAAGGCGC          TCTTTTATTGAACCA 100 52
CAP31_RS01400  264316 ..  264338 -  -3.4  -2.89742   GTTAACGGGGATATA           TGCTGGAATA GGT CACTGCAGCA           ATAAACAATTAGTCC  44 205
CAP31_RS01395  263202 ..  263218 -  -9.3  -3.14344   CAGCGCTGTCATTAA              TGCCGCC ATC GGCGGCT              TGCCAACATTGATTG  68 46
CAP31_RS01390  261848 ..  261875 -  -4.8  -3.31144   GTGGCAGGCCGACAA        GCGC-GCGGGA ATTGACA TCCCGTTGCGC        ATCCACGTGTATGAA  49 471
CAP31_RS01360 NONE
CAP31_RS01355 NONE
        ntrB NONE
CAP31_RS01345 NONE
        cynS  253339 ..  253354 -  -3.2  -3.01791   ACTCTGCCTTCAATA              GTATCC CGTT GGATCC               GGCAGGATTTTCCGG  43 109
CAP31_RS01335  252277 ..  252301 -  -2.9  -2.58788   GTAATCAAAAATCAG          CAGGCAT TCTCGTGCGCC ATGCCTG          TATCCGATATTACCA  41 35
CAP31_RS01330  251662 ..  251682 -  -5.4   -4.0616   CATCCCAATCATAAA            GCACCGCT TTCAT AGCAATGC            TGTGATCCACAAACT  66 14
CAP31_RS01325 NONE
CAP31_RS01320  250310 ..  250320 -  -6.8  -3.29511   GGGAGGCGGTTACAA                 GCTC AAC GAGC                 TGACTAGTGCCGGGC  56 371
CAP31_RS01310  249245 ..  249259 -  -5.8  -3.41581   TAATTGAGGAACGAA               TTATGT TTA ACATAA               GCAAAACCCTTTTGG  56 148
        argH NONE
CAP31_RS01285 NONE
CAP31_RS01280  240772 ..  240783 -  -5.8  -3.50853   CGGCGGCAATTACAA                TGCG CCGG CGCA                 GCTGGTGGGTGATTT  56 403
        ylqF  227969 ..  227981 -  -3.3  -3.42407   TACACCATGAATCAA                TCGGC AGC GACGA                TGGAAATCTGGCGCC  48 57
CAP31_RS01220  224729 ..  224742 -  -2.3  -2.71731   CGCAGGCCGGAAGCA               CTGCA AACG TGCTG                CATGGCCATCATCCT  39 66
CAP31_RS01210 NONE
CAP31_RS01205 NONE
CAP31_RS01200 NONE
CAP31_RS01195 NONE
        xerC  218717 ..  218744 -  -7.6  -4.66833   GCTGAACTGGAAAAA        GCCCAGGCTGCCA CAT TGGCTGCC-GCGC        AGGCACGTGCTGCCA  79 393
CAP31_RS01150  212400 ..  212410 -  -5.4    -3.322   ATGTCTATATACGAA                 GTCA GCA TGAC                 GCAACCTATTTAAAA  56 108
CAP31_RS01145 NONE
CAP31_RS01140 NONE
CAP31_RS01135 NONE
CAP31_RS01130 NONE
CAP31_RS01125  207499 ..  207509 -  -3.2  -3.53224   TAGGTGTGCCGCAAA                 TCCC GGT GGAA                 CGGTTGGCCGAGGAG  48 390
CAP31_RS01110  204167 ..  204204 - -14.2   -4.1523   TTGATTATACATAAA   CTCGACCAAGGCTGAC TGGATT GTCAGCTTTGGTCGCG    AACCTGCGCTTAAAC 100 52
CAP31_RS01105 NONE
CAP31_RS01100 NONE
CAP31_RS01095  201445 ..  201464 -  -2.8  -3.63922   AGGGGCTGGAAAATA            GCTGGGC GCGCCAT GCCC-GC            AATCACGAAATGTTG  50 362
CAP31_RS01065  196900 ..  196910 -  -3.2  -3.93583   CAATTTACGCATAAA                 CCCA TTG TGGA                 AATGTTGACCAAGGT  56 129
CAP31_RS01030 NONE
CAP31_RS01025 NONE
CAP31_RS01020  184441 ..  184458 -  -4.1   -4.7373   TCACGTTAGGAAAAA             CCATGGC CCGT ACCATAG              ATGTGAAAATTCTCG  72 465
CAP31_RS01005  182484 ..  182496 -  -4.1  -2.88768   TAGTAGAAGTCAAAG                CAAAC CGC GTTCG                GAAAAAGAAATTGCT  46 7
CAP31_RS01000 NONE
        rpmG  181944 ..  181973 - -16.7  -3.28712   GTCTTCGGCGGACAA       TAAAAAACCCGCT AAGC AGCGGGTTTTTTA        TTGTCCGGTCAACAG 100 57
        purE NONE
CAP31_RS00980  179209 ..  179248 -    -2  -4.07568   TCGTCCCCGTTAAAA  TCCGGATCAATCACAGCA AATA TGGCGTGATCGAACAGGT   GATAACGGGGATGCG  55 51
CAP31_RS00940 NONE
CAP31_RS00935 NONE
         tkt  166992 ..  167041 -  -2.8  -4.16105   AGCGATAAAAAAAAC GGTAGCTGCCGCGATCGCA-GCGC ATTG GCGCATGCGATGGCGGTAAAT-CA TGCGGAATTAGAATT  56 39
         gap  165918 ..  165944 - -17.4  -3.04322   TTTAAGTGCCGAACA         CTGGATCAGGCC TGA GACCTGATCCAG         TGTTCGGCGACATGC 100 44
         pgk  164624 ..  164646 - -16.3  -3.65902   GTGACTCGACTTAAA           GCGGGTGCC GGTCT GGCACCCGC           CAATTCTACTTATTT 100 35
         pyk NONE
CAP31_RS00910  162010 ..  162039 - -16.7  -3.05384   GTTTGTCGTACCCAA       TAAAAAAGGCAGC CGAA GCTGCCTTTTTTA        TTGGGTGGGACCGGA 100 41
CAP31_RS00880 NONE
CAP31_RS00875 NONE
CAP31_RS00870  155441 ..  155471 -  -6.1  -3.61398   CGGGCGCTGCAAGAA      CCGGCCGGATAAGC AGGT GCC-ACCCAGCCAG       TCGGGGTTACAGGCC  61 32
CAP31_RS00860  152495 ..  152513 -  -5.9  -3.53012   TGCCTGCGGTGGAAA             CGGCTGC ATCGG GCAGCGG             CAAGATCACAGTGGG  56 352
CAP31_RS00850  151762 ..  151775 -  -2.3  -3.28712   GTTTCTGGCTGACAA               GCCGC ATTG ACAGC                GTTTGAATTTAAAGC  43 34
CAP31_RS00835 NONE
CAP31_RS00830 NONE
CAP31_RS00825  148392 ..  148404 -  -6.9  -2.90392   GATCGGCTAAGGATA                GCCCG CTT CAGGC                GCTGGGCGAGTCACC  56 123
CAP31_RS00735 NONE
CAP31_RS00730 NONE
CAP31_RS00725  130776 ..  130792 -  -2.9  -3.28405   ATAATACATTATTAA              CTGTAAC CAC GTCACCG              AGTAATATACTTTAC  45 291
CAP31_RS00715 NONE
CAP31_RS00710 NONE
CAP31_RS00705 NONE
CAP31_RS00700  128206 ..  128235 - -16.6  -4.14472   GCAATAGCTGTAAAA       GCAAAACCCGGA AATAAA TCCGGGTTTTGC        TTTACGTAATTTTTG 100 168
         def NONE
CAP31_RS00625 NONE
CAP31_RS00620  107597 ..  107614 - -10.5  -3.60104   CGGACATTATAAATA             CGCCCGC TGGA GCGAGCG              TCCCAGCGTCAGGTT  74 372
CAP31_RS00585  101945 ..  101966 - -10.9  -2.62463   GTCATCACCGACAAG           CTGC-TCGCG TTC CGCGATGCAG           GCATTCAGGTCGCGC  64 375
CAP31_RS00535 NONE
CAP31_RS00530 NONE
CAP31_RS00525   92040 ..   92059 -  -7.9   -4.9448   ACCTAGGAAACAAAA            CCATGCA ACCCGA TGCATGG             GCTGATAAACGTGTT  86 348
        lysA   89773 ..   89785 -  -7.7  -3.43676   GGGAGGAACGGATAA                GCATG ACG CATGC                TCCTGATTATTGACT  64 219
CAP31_RS00505 NONE
CAP31_RS00500 NONE
CAP31_RS00495   86657 ..   86673 -  -6.5  -3.22091   ACGCGAATCGATGAA              CGACCCC GAT GAAGTCG              AACGCATCCTCGCTG  56 159
CAP31_RS00430 NONE
CAP31_RS00425   74417 ..   74438 -  -5.7  -3.24232   CTGGTTTTAAAGATA           CACCGGCCG CCAA CGACCTGCG            GCTCAGATCAGGGGG  54 28
CAP31_RS00420 NONE
CAP31_RS00415 NONE
CAP31_RS00410   72311 ..   72338 -   -20  -4.59511   AACAGCGCGCAAAAA        TGGCCGTACAGC TAAC GCTGTACGGCCA         TTTGCATTTATCGGC 100 49
CAP31_RS00375   63943 ..   63953 -  -2.4  -2.62184   TTCTGTCTTACAGTA                 CCAC CCG GGGG                 CTGACGGAATGCTGA  39 63
CAP31_RS00370   61488 ..   61519 -   -13  -5.31275   GGTTATGACAAAAAA      CGGGCAGCGCATGA ACTT CCACACGCTACCCG       GTCGCTCCAGCGGGG 100 43
CAP31_RS00335   55225 ..   55236 -  -7.2  -2.83082   AAAAATTTGAGCATA                GCCG AGGC CGGC                 CCGGTTTGAATAGCC  56 110
CAP31_RS00330   54785 ..   54804 - -10.8  -3.20639   CCACCAAATAAACCA            GGCTTTCA GCGA TGAAAGCC             TTTTTTATTGCCTGC  74 43
        glnA   50878 ..   50895 - -14.1  -5.63504   AAGCCCATAAAAAAA             GGGGCGG AAAT CCGCCCC              TTTCAGTTCGCTGTT 100 46
CAP31_RS00300   50311 ..   50325 -  -3.5  -3.50456   GTAAGCAAATAGTAA               GCCAG ATACG CTAGC               TGATGTTATTTGACG  51 31
CAP31_RS00295 NONE
        ntrC   47533 ..   47547 -  -4.2  -4.70583   CCGACGAATACAAAA               CCGG CAGCAAT CCGG               CCAGCTTCGACAAGC  74 224
CAP31_RS00275 NONE
CAP31_RS00270   44118 ..   44140 - -14.9  -2.71712   CCGCTTTCCGTAAAT           TGGGGCCTG ACCGA CAGGCCCCA           GCATTTTTACCTGTT  80 210
CAP31_RS14665 NONE
CAP31_RS14660   29950 ..   29965 -  -6.8  -3.30441   TATCATTTGCGATAA              CCGCGT TGTG ACGCGA               TTCGCAGCCGGACAC  61 503
CAP31_RS14655 NONE
        nifA NONE
CAP31_RS00175 NONE
       virB5 NONE
CAP31_RS14645 NONE
CAP31_RS14640 NONE
CAP31_RS00170 NONE
CAP31_RS14635 NONE
CAP31_RS14630 NONE
CAP31_RS00160 NONE
CAP31_RS00155   24109 ..   24129 -  -4.8  -2.96152   AGATCAATGGAGACA           GCGAACAGA CGGT TCTGTTC-C            AAACAGCTGCTCGTT  50 88
CAP31_RS00150   23581 ..   23597 -  -3.7  -4.99645   ATCTGACAAACAAAA              CTGACAT AAA ATGTCAC              GATTAAACGCCGGGA  76 84
        nifB NONE
CAP31_RS00140 NONE
CAP31_RS00135   21095 ..   21144 -  -3.3  -3.54543   AGCCAGTCGTCGAAA TCCGCCAGCGCAGCATCACCGCC ACTT GACGGCAGTGCCGGTGTTGCGGA ATACTGGCTGGAGGC  51 63
CAP31_RS00130 NONE
CAP31_RS00125 NONE
CAP31_RS00120 NONE
CAP31_RS00115 NONE
CAP31_RS00110 NONE
CAP31_RS14595 NONE
CAP31_RS00105 NONE
        nifT NONE
CAP31_RS00095 NONE
CAP31_RS00090   16002 ..   16014 -  -6.9  -2.83403   GGGGCTTCAGTAAAT                CGCCG CTC CGGCA                CCAACGTTGATTGAT  56 4
CAP31_RS00085 NONE
CAP31_RS00080   14755 ..   14778 - -18.2  -3.51232   CTTTGCCCAAATCAA          CGGCTACCGG CTTG CCGGTAGCCG           TAACTTGGCTTAAAC 100 35
CAP31_RS00070   13180 ..   13214 -    -4  -3.54424   GTCTACCCTGTCAAA     GGCTATTCGCTGACCG CCT CGGTCACCGCCGCGCC     CGCCGCGCCTGTTTC  53 499
CAP31_RS00055 NONE
CAP31_RS00050 NONE
CAP31_RS14550 NONE
CAP31_RS14545 NONE
CAP31_RS00045 NONE
CAP31_RS00040 NONE
CAP31_RS14540 NONE
CAP31_RS00035 NONE
CAP31_RS00030 NONE
        grxD NONE
CAP31_RS14535 NONE
CAP31_RS14530    5584 ..    5597 -  -8.1  -3.58905   ACTGCTGACATACAA               TGCCC GAAA GGGCA                AAGAATGGAGCAGGC  69 239
        merR     741 ..     755 -  -2.8  -3.55323   AAAAACCGTACACAA               GAAGAA TTT TTCTAC               GCATTCAACGCCCTG   0 155
