SYO3AOP1_RS00010	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS00010	SM00760	Bacterial dnaA protein helix-turn-helix domain
SYO3AOP1_RS00015	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SYO3AOP1_RS00030	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SYO3AOP1_RS00055	SM00052	Putative diguanylate phosphodiesterase
SYO3AOP1_RS00055	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SYO3AOP1_RS00055	SM00091	PAS domain
SYO3AOP1_RS00055	SM00267	diguanylate cyclase
SYO3AOP1_RS00150	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
SYO3AOP1_RS00155	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SYO3AOP1_RS00155	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
SYO3AOP1_RS00160	SM01130	SYO3AOP1_RS00160
SYO3AOP1_RS00180	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS00245	SM00938	Nitrogen regulatory protein P-II
SYO3AOP1_RS00275	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SYO3AOP1_RS00280	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS00340	SM00852	Probable molybdopterin binding domain
SYO3AOP1_RS00355	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
SYO3AOP1_RS00385	SM00562	SYO3AOP1_RS00385
SYO3AOP1_RS00395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SYO3AOP1_RS00405	SM00960	Roadblock/LC7 domain
SYO3AOP1_RS00450	SM00465	GIY-YIG type nucleases (URI domain)
SYO3AOP1_RS00470	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS00480	SM00977	TilS substrate C-terminal domain
SYO3AOP1_RS00560	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SYO3AOP1_RS00580	SM00831	Cation transporter/ATPase, N-terminus
SYO3AOP1_RS00590	SM00855	Phosphoglycerate mutase family
SYO3AOP1_RS00600	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS00600	SM00464	Found in ATP-dependent protease La (LON)
SYO3AOP1_RS00620	SM00935	Outer membrane protein (OmpH-like)
SYO3AOP1_RS00645	SM00852	Probable molybdopterin binding domain
SYO3AOP1_RS00665	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SYO3AOP1_RS00665	SM00387	Histidine kinase-like ATPases
SYO3AOP1_RS00665	SM00388	His Kinase A (phosphoacceptor) domain
SYO3AOP1_RS00670	SM00448	cheY-homologous receiver domain
SYO3AOP1_RS00670	SM00862	Transcriptional regulatory protein, C terminal
SYO3AOP1_RS00685	SM00831	Cation transporter/ATPase, N-terminus
SYO3AOP1_RS00725	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SYO3AOP1_RS00725	SM00387	Histidine kinase-like ATPases
SYO3AOP1_RS00725	SM00388	His Kinase A (phosphoacceptor) domain
SYO3AOP1_RS00730	SM00448	cheY-homologous receiver domain
SYO3AOP1_RS00730	SM00862	Transcriptional regulatory protein, C terminal
SYO3AOP1_RS00745	SM00563	Phosphate acyltransferases
SYO3AOP1_RS00750	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SYO3AOP1_RS00755	SM01323	SYO3AOP1_RS00755
SYO3AOP1_RS00775	SM00450	Rhodanese Homology Domain
SYO3AOP1_RS00865	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS00885	SM00968	SMC proteins Flexible Hinge Domain
SYO3AOP1_RS00895	SM00363	S4 RNA-binding domain
SYO3AOP1_RS00910	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS00975	SM00052	Putative diguanylate phosphodiesterase
SYO3AOP1_RS00975	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SYO3AOP1_RS00975	SM00091	PAS domain
SYO3AOP1_RS00975	SM00267	diguanylate cyclase
SYO3AOP1_RS00990	SM00957	SecA DEAD-like domain
SYO3AOP1_RS00990	SM00958	SecA preprotein cross-linking domain
SYO3AOP1_RS01010	SM01005	Alanine racemase, C-terminal domain
SYO3AOP1_RS01015	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS01015	SM00448	cheY-homologous receiver domain
SYO3AOP1_RS01030	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SYO3AOP1_RS01045	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS01075	SM00996	S-adenosyl-L-homocysteine hydrolase
SYO3AOP1_RS01075	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
SYO3AOP1_RS01085	SM00838	Elongation factor G C-terminus
SYO3AOP1_RS01210	SM00267	diguanylate cyclase
SYO3AOP1_RS01225	SM01400	SYO3AOP1_RS01225
SYO3AOP1_RS01245	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SYO3AOP1_RS01270	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS01320	SM01152	SYO3AOP1_RS01320
SYO3AOP1_RS01335	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYO3AOP1_RS01350	SM00662	RNA polymerases D
SYO3AOP1_RS01355	SM00363	S4 RNA-binding domain
SYO3AOP1_RS01355	SM01390	SYO3AOP1_RS01355
SYO3AOP1_RS01375	SM00316	Ribosomal protein S1-like RNA-binding domain
SYO3AOP1_RS01435	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SYO3AOP1_RS01440	SM01374	SYO3AOP1_RS01440
SYO3AOP1_RS01460	SM00322	K homology RNA-binding domain
SYO3AOP1_RS01475	SM01382	SYO3AOP1_RS01475
SYO3AOP1_RS01475	SM01383	SYO3AOP1_RS01475
SYO3AOP1_RS01495	SM01403	SYO3AOP1_RS01495
SYO3AOP1_RS01505	SM00838	Elongation factor G C-terminus
SYO3AOP1_RS01505	SM00889	Elongation factor G, domain IV
SYO3AOP1_RS01520	SM00663	RNA polymerase I subunit A N-terminus
SYO3AOP1_RS01545	SM00649	Ribosomal protein L11/L12
SYO3AOP1_RS01550	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SYO3AOP1_RS01550	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SYO3AOP1_RS01620	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS01665	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS01665	SM00994	ClpX C4-type zinc finger
SYO3AOP1_RS01665	SM01086	C-terminal, D2-small domain, of ClpB protein
SYO3AOP1_RS01690	SM00400	zinc finger
SYO3AOP1_RS01690	SM00493	SYO3AOP1_RS01690
SYO3AOP1_RS01710	SM00448	cheY-homologous receiver domain
SYO3AOP1_RS01710	SM00862	Transcriptional regulatory protein, C terminal
SYO3AOP1_RS01730	SM00861	Transketolase, pyrimidine binding domain
SYO3AOP1_RS01745	SM00028	Tetratricopeptide repeats
SYO3AOP1_RS01850	SM00387	Histidine kinase-like ATPases
SYO3AOP1_RS01850	SM00388	His Kinase A (phosphoacceptor) domain
SYO3AOP1_RS01855	SM00448	cheY-homologous receiver domain
SYO3AOP1_RS01855	SM00862	Transcriptional regulatory protein, C terminal
SYO3AOP1_RS01880	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SYO3AOP1_RS01880	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SYO3AOP1_RS01880	SM00493	SYO3AOP1_RS01880
SYO3AOP1_RS01890	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS01895	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS01905	SM00904	Riboflavin kinase
SYO3AOP1_RS01910	SM00028	Tetratricopeptide repeats
SYO3AOP1_RS01925	SM00357	Cold shock protein domain
SYO3AOP1_RS01930	SM00357	Cold shock protein domain
SYO3AOP1_RS01935	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYO3AOP1_RS01960	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SYO3AOP1_RS01990	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS02010	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS02010	SM00962	SRP54-type protein, GTPase domain
SYO3AOP1_RS02010	SM00963	SRP54-type protein, helical bundle domain
SYO3AOP1_RS02030	SM00116	Domain in cystathionine beta-synthase and other proteins.
SYO3AOP1_RS02030	SM01091	Transporter associated domain
SYO3AOP1_RS02035	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS02075	SM00100	Cyclic nucleotide-monophosphate binding domain
SYO3AOP1_RS02075	SM00419	helix_turn_helix, cAMP Regulatory protein
SYO3AOP1_RS02120	SM00116	Domain in cystathionine beta-synthase and other proteins.
SYO3AOP1_RS02125	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYO3AOP1_RS02160	SM00257	Lysin motif
SYO3AOP1_RS02205	SM01209	SYO3AOP1_RS02205
SYO3AOP1_RS02215	SM00842	Cell division protein FtsA
SYO3AOP1_RS02220	SM00864	Tubulin/FtsZ family, GTPase domain
SYO3AOP1_RS02220	SM00865	Tubulin/FtsZ family, C-terminal domain
SYO3AOP1_RS02230	SM01207	SYO3AOP1_RS02230
SYO3AOP1_RS02235	SM01007	Class II Aldolase and Adducin N-terminal domain
SYO3AOP1_RS02245	SM00450	Rhodanese Homology Domain
SYO3AOP1_RS02295	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SYO3AOP1_RS02320	SM00320	WD40 repeats
SYO3AOP1_RS02360	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS02405	SM00989	SYO3AOP1_RS02405
SYO3AOP1_RS02430	SM00100	Cyclic nucleotide-monophosphate binding domain
SYO3AOP1_RS02430	SM00419	helix_turn_helix, cAMP Regulatory protein
SYO3AOP1_RS02470	SM00732	Likely ribonuclease with RNase H fold.
SYO3AOP1_RS02550	SM00487	DEAD-like helicases superfamily
SYO3AOP1_RS02550	SM00490	helicase superfamily c-terminal domain
SYO3AOP1_RS02625	SM00849	Metallo-beta-lactamase superfamily
SYO3AOP1_RS02710	SM00788	Adenylosuccinate synthetase
SYO3AOP1_RS02810	SM00978	SYO3AOP1_RS02810
SYO3AOP1_RS02815	SM00363	S4 RNA-binding domain
SYO3AOP1_RS02865	SM01209	SYO3AOP1_RS02865
SYO3AOP1_RS02865	SM01210	SYO3AOP1_RS02865
SYO3AOP1_RS02920	SM00271	DnaJ molecular chaperone homology domain
SYO3AOP1_RS02955	SM00316	Ribosomal protein S1-like RNA-binding domain
SYO3AOP1_RS02985	SM01057	Eukaryotic-type carbonic anhydrase
SYO3AOP1_RS03000	SM00028	Tetratricopeptide repeats
SYO3AOP1_RS03005	SM00852	Probable molybdopterin binding domain
SYO3AOP1_RS03010	SM00851	MGS-like domain
SYO3AOP1_RS03030	SM00883	Chaperonin 10 Kd subunit
SYO3AOP1_RS03040	SM00387	Histidine kinase-like ATPases
SYO3AOP1_RS03040	SM00388	His Kinase A (phosphoacceptor) domain
SYO3AOP1_RS03045	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS03045	SM00448	cheY-homologous receiver domain
SYO3AOP1_RS03090	SM00836	DALR anticodon binding domain
SYO3AOP1_RS03090	SM01016	Arginyl tRNA synthetase N terminal dom
SYO3AOP1_RS03105	SM00474	3'-5' exonuclease
SYO3AOP1_RS03105	SM00482	DNA polymerase A domain
SYO3AOP1_RS03120	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYO3AOP1_RS03120	SM00876	Biotin and Thiamin Synthesis associated domain
SYO3AOP1_RS03180	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SYO3AOP1_RS03180	SM00954	Region found in RelA / SpoT proteins
SYO3AOP1_RS03195	SM00881	CoA binding domain
SYO3AOP1_RS03260	SM00481	DNA polymerase alpha chain like domain
SYO3AOP1_RS03285	SM01001	AIR carboxylase
SYO3AOP1_RS03295	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS03295	SM00962	SRP54-type protein, GTPase domain
SYO3AOP1_RS03295	SM00963	SRP54-type protein, helical bundle domain
SYO3AOP1_RS03350	SM01329	SYO3AOP1_RS03350
SYO3AOP1_RS03365	SM00861	Transketolase, pyrimidine binding domain
SYO3AOP1_RS03460	SM00487	DEAD-like helicases superfamily
SYO3AOP1_RS03460	SM00490	helicase superfamily c-terminal domain
SYO3AOP1_RS03480	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYO3AOP1_RS03550	SM00478	endonuclease III
SYO3AOP1_RS03555	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SYO3AOP1_RS03560	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SYO3AOP1_RS03575	SM00530	Helix-turn-helix XRE-family like proteins 
SYO3AOP1_RS03580	SM00478	endonuclease III
SYO3AOP1_RS03595	SM00116	Domain in cystathionine beta-synthase and other proteins.
SYO3AOP1_RS03640	SM00831	Cation transporter/ATPase, N-terminus
SYO3AOP1_RS03665	SM00363	S4 RNA-binding domain
SYO3AOP1_RS03685	SM00448	cheY-homologous receiver domain
SYO3AOP1_RS03685	SM00850	LytTr DNA-binding domain
SYO3AOP1_RS03720	SM00903	Flavin reductase like domain
SYO3AOP1_RS03735	SM00903	Flavin reductase like domain
SYO3AOP1_RS03780	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
SYO3AOP1_RS03785	SM00267	diguanylate cyclase
SYO3AOP1_RS03790	SM00052	Putative diguanylate phosphodiesterase
SYO3AOP1_RS03850	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS03860	SM00387	Histidine kinase-like ATPases
SYO3AOP1_RS03860	SM00388	His Kinase A (phosphoacceptor) domain
SYO3AOP1_RS03895	SM00838	Elongation factor G C-terminus
SYO3AOP1_RS03935	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYO3AOP1_RS03965	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYO3AOP1_RS03965	SM00116	Domain in cystathionine beta-synthase and other proteins.
SYO3AOP1_RS03965	SM00267	diguanylate cyclase
SYO3AOP1_RS03970	SM00116	Domain in cystathionine beta-synthase and other proteins.
SYO3AOP1_RS04055	SM00244	prohibitin homologues
SYO3AOP1_RS04100	SM00316	Ribosomal protein S1-like RNA-binding domain
SYO3AOP1_RS04100	SM00322	K homology RNA-binding domain
SYO3AOP1_RS04105	SM01387	SYO3AOP1_RS04105
SYO3AOP1_RS04130	SM00831	Cation transporter/ATPase, N-terminus
SYO3AOP1_RS04150	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SYO3AOP1_RS04150	SM00245	tail specific protease
SYO3AOP1_RS04160	SM00830	Chorismate mutase type II
SYO3AOP1_RS04180	SM00116	Domain in cystathionine beta-synthase and other proteins.
SYO3AOP1_RS04180	SM01240	SYO3AOP1_RS04180
SYO3AOP1_RS04200	SM00930	SYO3AOP1_RS04200
SYO3AOP1_RS04210	SM00487	DEAD-like helicases superfamily
SYO3AOP1_RS04210	SM00490	helicase superfamily c-terminal domain
SYO3AOP1_RS04240	SM00845	GatB domain
SYO3AOP1_RS04245	SM00998	Adenylosuccinate lyase C-terminus
SYO3AOP1_RS04250	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYO3AOP1_RS04315	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS04410	SM00849	Metallo-beta-lactamase superfamily
SYO3AOP1_RS04410	SM01027	Beta-Casp domain
SYO3AOP1_RS04445	SM00650	Ribosomal RNA adenine dimethylases
SYO3AOP1_RS04480	SM00704	CDGSH-type zinc finger. Function unknown.
SYO3AOP1_RS04490	SM00411	bacterial (prokaryotic) histone like domain
SYO3AOP1_RS04500	SM00506	Appr-1"-p processing enzyme
SYO3AOP1_RS04510	SM00448	cheY-homologous receiver domain
SYO3AOP1_RS04510	SM00862	Transcriptional regulatory protein, C terminal
SYO3AOP1_RS04520	SM01409	SYO3AOP1_RS04520
SYO3AOP1_RS04525	SM00072	Guanylate kinase homologues.
SYO3AOP1_RS04590	SM00487	DEAD-like helicases superfamily
SYO3AOP1_RS04590	SM00490	helicase superfamily c-terminal domain
SYO3AOP1_RS04615	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SYO3AOP1_RS04620	SM00363	S4 RNA-binding domain
SYO3AOP1_RS04660	SM00899	SYO3AOP1_RS04660
SYO3AOP1_RS04705	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SYO3AOP1_RS04725	SM01133	SYO3AOP1_RS04725
SYO3AOP1_RS04740	SM00220	Serine/Threonine protein kinases, catalytic domain
SYO3AOP1_RS04750	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SYO3AOP1_RS04755	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SYO3AOP1_RS04760	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SYO3AOP1_RS04770	SM00260	Two component signalling adaptor domain
SYO3AOP1_RS04770	SM00448	cheY-homologous receiver domain
SYO3AOP1_RS04780	SM00073	Histidine Phosphotransfer domain
SYO3AOP1_RS04780	SM00260	Two component signalling adaptor domain
SYO3AOP1_RS04780	SM00387	Histidine kinase-like ATPases
SYO3AOP1_RS04780	SM01231	SYO3AOP1_RS04780
SYO3AOP1_RS04785	SM00260	Two component signalling adaptor domain
SYO3AOP1_RS04800	SM00448	cheY-homologous receiver domain
SYO3AOP1_RS04840	SM00226	Low molecular weight phosphatase family
SYO3AOP1_RS04855	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SYO3AOP1_RS04860	SM00487	DEAD-like helicases superfamily
SYO3AOP1_RS04860	SM00490	helicase superfamily c-terminal domain
SYO3AOP1_RS04860	SM00982	SYO3AOP1_RS04860
SYO3AOP1_RS04860	SM01058	CarD-like/TRCF domain
SYO3AOP1_RS04910	SM00450	Rhodanese Homology Domain
SYO3AOP1_RS04975	SM00028	Tetratricopeptide repeats
SYO3AOP1_RS04995	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS05005	SM00480	DNA polymerase III beta subunit
SYO3AOP1_RS05010	SM00387	Histidine kinase-like ATPases
SYO3AOP1_RS05010	SM00433	TopoisomeraseII
SYO3AOP1_RS05070	SM01234	SYO3AOP1_RS05070
SYO3AOP1_RS05085	SM00357	Cold shock protein domain
SYO3AOP1_RS05085	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS05085	SM00959	Rho termination factor, N-terminal domain
SYO3AOP1_RS05095	SM00937	SYO3AOP1_RS05095
SYO3AOP1_RS05105	SM00487	DEAD-like helicases superfamily
SYO3AOP1_RS05105	SM00490	helicase superfamily c-terminal domain
SYO3AOP1_RS05115	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS05120	SM00316	Ribosomal protein S1-like RNA-binding domain
SYO3AOP1_RS05140	SM00363	S4 RNA-binding domain
SYO3AOP1_RS05155	SM00028	Tetratricopeptide repeats
SYO3AOP1_RS05320	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYO3AOP1_RS05355	SM00493	SYO3AOP1_RS05355
SYO3AOP1_RS05365	SM00917	LeuA allosteric (dimerisation) domain
SYO3AOP1_RS05390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SYO3AOP1_RS05390	SM00387	Histidine kinase-like ATPases
SYO3AOP1_RS05390	SM00388	His Kinase A (phosphoacceptor) domain
SYO3AOP1_RS05410	SM01192	SYO3AOP1_RS05410
SYO3AOP1_RS05410	SM01193	SYO3AOP1_RS05410
SYO3AOP1_RS05415	SM00878	Biotin carboxylase C-terminal domain
SYO3AOP1_RS05445	SM00881	CoA binding domain
SYO3AOP1_RS05450	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYO3AOP1_RS05505	SM00841	Elongation factor P, C-terminal
SYO3AOP1_RS05505	SM01185	SYO3AOP1_RS05505
SYO3AOP1_RS05530	SM00798	AICARFT/IMPCHase bienzyme
SYO3AOP1_RS05530	SM00851	MGS-like domain
SYO3AOP1_RS05560	SM01230	SYO3AOP1_RS05560
SYO3AOP1_RS05565	SM00938	Nitrogen regulatory protein P-II
SYO3AOP1_RS05610	SM00903	Flavin reductase like domain
SYO3AOP1_RS05620	SM00986	Uracil DNA glycosylase superfamily
SYO3AOP1_RS05620	SM00987	UreE urease accessory protein, C-terminal domain 
SYO3AOP1_RS05625	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
SYO3AOP1_RS05635	SM00411	bacterial (prokaryotic) histone like domain
SYO3AOP1_RS05670	SM00316	Ribosomal protein S1-like RNA-binding domain
SYO3AOP1_RS05670	SM00357	Cold shock protein domain
SYO3AOP1_RS05670	SM00955	SYO3AOP1_RS05670
SYO3AOP1_RS05710	SM00014	Acid phosphatase homologues
SYO3AOP1_RS05715	SM00481	DNA polymerase alpha chain like domain
SYO3AOP1_RS05720	SM00487	DEAD-like helicases superfamily
SYO3AOP1_RS05720	SM00490	helicase superfamily c-terminal domain
SYO3AOP1_RS05760	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS05765	SM00829	Enoylreductase
SYO3AOP1_RS05775	SM00346	helix_turn_helix isocitrate lyase regulation
SYO3AOP1_RS05790	SM00318	Staphylococcal nuclease homologues
SYO3AOP1_RS05890	SM00563	Phosphate acyltransferases
SYO3AOP1_RS05925	SM00563	Phosphate acyltransferases
SYO3AOP1_RS05935	SM00316	Ribosomal protein S1-like RNA-binding domain
SYO3AOP1_RS05950	SM00855	Phosphoglycerate mutase family
SYO3AOP1_RS05980	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SYO3AOP1_RS05990	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SYO3AOP1_RS06010	SM00387	Histidine kinase-like ATPases
SYO3AOP1_RS06010	SM00388	His Kinase A (phosphoacceptor) domain
SYO3AOP1_RS06015	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS06015	SM00448	cheY-homologous receiver domain
SYO3AOP1_RS06035	SM00434	DNA Topoisomerase IV
SYO3AOP1_RS06040	SM00450	Rhodanese Homology Domain
SYO3AOP1_RS06085	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SYO3AOP1_RS06125	SM00346	helix_turn_helix isocitrate lyase regulation
SYO3AOP1_RS06190	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS06250	SM00486	DNA polymerase type-B family
SYO3AOP1_RS06305	SM00052	Putative diguanylate phosphodiesterase
SYO3AOP1_RS06410	SM00411	bacterial (prokaryotic) histone like domain
SYO3AOP1_RS06475	SM00420	helix_turn_helix, Deoxyribose operon repressor
SYO3AOP1_RS06535	SM01007	Class II Aldolase and Adducin N-terminal domain
SYO3AOP1_RS06550	SM00450	Rhodanese Homology Domain
SYO3AOP1_RS06555	SM00478	endonuclease III
SYO3AOP1_RS06810	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SYO3AOP1_RS06810	SM00481	DNA polymerase alpha chain like domain
SYO3AOP1_RS06810	SM00483	DNA polymerase X family
SYO3AOP1_RS06860	SM00849	Metallo-beta-lactamase superfamily
SYO3AOP1_RS06865	SM00960	Roadblock/LC7 domain
SYO3AOP1_RS06885	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS06890	SM00028	Tetratricopeptide repeats
SYO3AOP1_RS06975	SM00937	SYO3AOP1_RS06975
SYO3AOP1_RS07000	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
SYO3AOP1_RS07025	SM00493	SYO3AOP1_RS07025
SYO3AOP1_RS07035	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS07075	SM00646	SYO3AOP1_RS07075
SYO3AOP1_RS07160	SM01321	SYO3AOP1_RS07160
SYO3AOP1_RS07275	SM00093	SERine  Proteinase INhibitors
SYO3AOP1_RS07330	SM00028	Tetratricopeptide repeats
SYO3AOP1_RS07330	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SYO3AOP1_RS07350	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SYO3AOP1_RS07350	SM00292	breast cancer carboxy-terminal domain
SYO3AOP1_RS07350	SM00532	Ligase N family
SYO3AOP1_RS07355	SM01133	SYO3AOP1_RS07355
SYO3AOP1_RS07365	SM00422	helix_turn_helix, mercury resistance
SYO3AOP1_RS07370	SM00271	DnaJ molecular chaperone homology domain
SYO3AOP1_RS07375	SM00479	SYO3AOP1_RS07375
SYO3AOP1_RS07395	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYO3AOP1_RS07400	SM00487	DEAD-like helicases superfamily
SYO3AOP1_RS07400	SM00490	helicase superfamily c-terminal domain
SYO3AOP1_RS07425	SM00257	Lysin motif
SYO3AOP1_RS07500	SM00028	Tetratricopeptide repeats
SYO3AOP1_RS07505	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYO3AOP1_RS07570	SM00267	diguanylate cyclase
SYO3AOP1_RS07575	SM00387	Histidine kinase-like ATPases
SYO3AOP1_RS07585	SM00448	cheY-homologous receiver domain
SYO3AOP1_RS07585	SM00862	Transcriptional regulatory protein, C terminal
SYO3AOP1_RS07650	SM00478	endonuclease III
SYO3AOP1_RS07655	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SYO3AOP1_RS07655	SM00475	5'-3' exonuclease
SYO3AOP1_RS07660	SM01004	Delta-aminolevulinic acid dehydratase
SYO3AOP1_RS07675	SM00984	UDP binding domain
SYO3AOP1_RS07680	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYO3AOP1_RS07700	SM00855	Phosphoglycerate mutase family
SYO3AOP1_RS07745	SM00933	SYO3AOP1_RS07745
SYO3AOP1_RS07755	SM00028	Tetratricopeptide repeats
SYO3AOP1_RS07770	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
SYO3AOP1_RS07790	SM00460	Transglutaminase/protease-like homologues
SYO3AOP1_RS07915	SM00116	Domain in cystathionine beta-synthase and other proteins.
SYO3AOP1_RS07920	SM00479	SYO3AOP1_RS07920
SYO3AOP1_RS07930	SM00411	bacterial (prokaryotic) histone like domain
SYO3AOP1_RS07950	SM00028	Tetratricopeptide repeats
SYO3AOP1_RS08000	SM00052	Putative diguanylate phosphodiesterase
SYO3AOP1_RS08000	SM00267	diguanylate cyclase
SYO3AOP1_RS08040	SM00463	Small MutS-related domain
SYO3AOP1_RS08040	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
SYO3AOP1_RS08040	SM00534	ATPase domain of DNA mismatch repair MUTS family
SYO3AOP1_RS08065	SM00935	Outer membrane protein (OmpH-like)
SYO3AOP1_RS08075	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS08075	SM01086	C-terminal, D2-small domain, of ClpB protein
SYO3AOP1_RS08080	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS08120	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS08120	SM01086	C-terminal, D2-small domain, of ClpB protein
SYO3AOP1_RS08140	SM00840	SYO3AOP1_RS08140
SYO3AOP1_RS08180	SM01228	SYO3AOP1_RS08180
SYO3AOP1_RS08200	SM00052	Putative diguanylate phosphodiesterase
SYO3AOP1_RS08200	SM00267	diguanylate cyclase
SYO3AOP1_RS08230	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS08230	SM01086	C-terminal, D2-small domain, of ClpB protein
SYO3AOP1_RS08280	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS08390	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS08420	SM00028	Tetratricopeptide repeats
SYO3AOP1_RS08440	SM00962	SRP54-type protein, GTPase domain
SYO3AOP1_RS08500	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SYO3AOP1_RS08505	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SYO3AOP1_RS08505	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SYO3AOP1_RS08505	SM00487	DEAD-like helicases superfamily
SYO3AOP1_RS08505	SM00493	SYO3AOP1_RS08505
SYO3AOP1_RS08540	SM00487	DEAD-like helicases superfamily
SYO3AOP1_RS08540	SM00490	helicase superfamily c-terminal domain
SYO3AOP1_RS08545	SM00822	SYO3AOP1_RS08545
SYO3AOP1_RS08550	SM00823	Phosphopantetheine attachment site
SYO3AOP1_RS08555	SM00825	Beta-ketoacyl synthase
SYO3AOP1_RS08560	SM00358	Double-stranded RNA binding motif
SYO3AOP1_RS08560	SM00535	Ribonuclease III family
SYO3AOP1_RS08595	SM00322	K homology RNA-binding domain
SYO3AOP1_RS08595	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SYO3AOP1_RS08605	SM00873	B3/4 domain
SYO3AOP1_RS08605	SM00874	tRNA synthetase B5 domain
SYO3AOP1_RS08605	SM00896	Ferredoxin-fold anticodon binding domain
SYO3AOP1_RS08655	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS08670	SM00363	S4 RNA-binding domain
SYO3AOP1_RS08690	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYO3AOP1_RS08690	SM00091	PAS domain
SYO3AOP1_RS08695	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS08740	SM00116	Domain in cystathionine beta-synthase and other proteins.
SYO3AOP1_RS08740	SM00924	MgtE intracellular N domain
SYO3AOP1_RS08780	SM00422	helix_turn_helix, mercury resistance
SYO3AOP1_RS08780	SM00857	Resolvase, N terminal domain
SYO3AOP1_RS08795	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SYO3AOP1_RS08805	SM00232	JAB/MPN domain
SYO3AOP1_RS08815	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SYO3AOP1_RS08850	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SYO3AOP1_RS08865	SM01211	SYO3AOP1_RS08865
SYO3AOP1_RS08885	SM00518	AP endonuclease family 2
SYO3AOP1_RS08890	SM00849	Metallo-beta-lactamase superfamily
SYO3AOP1_RS08905	SM00878	Biotin carboxylase C-terminal domain
SYO3AOP1_RS08915	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS08945	SM00382	ATPases associated with a variety of cellular activities
SYO3AOP1_RS08945	SM00448	cheY-homologous receiver domain
SYO3AOP1_RS08950	SM00387	Histidine kinase-like ATPases
SYO3AOP1_RS08950	SM00388	His Kinase A (phosphoacceptor) domain
SYO3AOP1_RS08980	SM00984	UDP binding domain
SYO3AOP1_RS09025	SM00947	Carbonic anhydrase
SYO3AOP1_RS09030	SM00852	Probable molybdopterin binding domain
SYO3AOP1_RS09070	SM00052	Putative diguanylate phosphodiesterase
SYO3AOP1_RS09070	SM00267	diguanylate cyclase
SYO3AOP1_RS09075	SM00917	LeuA allosteric (dimerisation) domain
SYO3AOP1_RS09100	SM00028	Tetratricopeptide repeats
SYO3AOP1_RS09115	SM00267	diguanylate cyclase
SYO3AOP1_RS09120	SM00267	diguanylate cyclase
SYO3AOP1_RS09155	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SYO3AOP1_RS09155	SM00091	PAS domain
