locus-tag class description SKTS_RS00005 PF11638 DnaA N-terminal domain SKTS_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix SKTS_RS00005 PF00308 Bacterial dnaA protein SKTS_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain SKTS_RS00010 PF02767 DNA polymerase III beta subunit, central domain SKTS_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain SKTS_RS00015 PF00204 DNA gyrase B SKTS_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS00015 PF01751 Toprim domain SKTS_RS00015 PF18053 DNA gyrase B subunit insert domain SKTS_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus SKTS_RS00020 PF13368 Topoisomerase C-terminal repeat SKTS_RS00020 PF01751 Toprim domain SKTS_RS00020 PF01131 DNA topoisomerase SKTS_RS00025 PF04361 Protein of unknown function (DUF494) SKTS_RS00030 PF02481 DNA recombination-mediator protein A SKTS_RS00030 PF17782 DprA winged helix domain SKTS_RS00040 PF01327 Polypeptide deformylase SKTS_RS00045 PF02911 Formyl transferase, C-terminal domain SKTS_RS00045 PF00551 Formyl transferase SKTS_RS00050 PF01435 Peptidase family M48 SKTS_RS00055 PF01189 16S rRNA methyltransferase RsmB/F SKTS_RS00055 PF01029 NusB family SKTS_RS00065 PF00672 HAMP domain SKTS_RS00065 PF00989 PAS fold SKTS_RS00065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS00065 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS00070 PF02954 Bacterial regulatory protein, Fis family SKTS_RS00070 PF00072 Response regulator receiver domain SKTS_RS00070 PF00158 Sigma-54 interaction domain SKTS_RS00075 PF02254 TrkA-N domain SKTS_RS00075 PF02080 TrkA-C domain SKTS_RS00080 PF02386 Cation transport protein SKTS_RS00090 PF01612 3'-5' exonuclease SKTS_RS00090 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SKTS_RS00090 PF00476 DNA polymerase family A SKTS_RS00090 PF01367 5'-3' exonuclease, C-terminal SAM fold SKTS_RS00095 PF03641 Possible lysine decarboxylase SKTS_RS00105 PF01636 Phosphotransferase enzyme family SKTS_RS00115 PF00580 UvrD/REP helicase N-terminal domain SKTS_RS00115 PF13361 UvrD-like helicase C-terminal domain SKTS_RS00120 PF00485 Phosphoribulokinase / Uridine kinase family SKTS_RS00125 PF08264 Anticodon-binding domain of tRNA SKTS_RS00125 PF13603 Leucyl-tRNA synthetase, Domain 2 SKTS_RS00125 PF00133 tRNA synthetases class I (I, L, M and V) SKTS_RS00125 PF09334 tRNA synthetases class I (M) SKTS_RS00135 PF14840 Processivity clamp loader gamma complex DNA pol III C-term SKTS_RS00135 PF06144 DNA polymerase III, delta subunit SKTS_RS00140 PF00171 Aldehyde dehydrogenase family SKTS_RS00145 PF01467 Cytidylyltransferase-like SKTS_RS00155 PF02590 Predicted SPOUT methyltransferase SKTS_RS00160 PF02545 Maf-like protein SKTS_RS00165 PF00575 S1 RNA binding domain SKTS_RS00165 PF10150 Ribonuclease E/G family SKTS_RS00170 PF00350 Dynamin family SKTS_RS00175 PF02594 Uncharacterised ACR, YggU family COG1872 SKTS_RS00180 PF02325 YGGT family SKTS_RS00185 PF03807 NADP oxidoreductase coenzyme F420-dependent SKTS_RS00185 PF14748 Pyrroline-5-carboxylate reductase dimerisation SKTS_RS00190 PF00005 ABC transporter SKTS_RS00195 PF00768 D-alanyl-D-alanine carboxypeptidase SKTS_RS00205 PF02080 TrkA-C domain SKTS_RS00205 PF03471 Transporter associated domain SKTS_RS00205 PF00999 Sodium/hydrogen exchanger family SKTS_RS00225 PF00072 Response regulator receiver domain SKTS_RS00225 PF00486 Transcriptional regulatory protein, C terminal SKTS_RS00230 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS00230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS00230 PF08521 Two-component sensor kinase N-terminal SKTS_RS00235 PF00593 TonB dependent receptor SKTS_RS00235 PF07715 TonB-dependent Receptor Plug Domain SKTS_RS00240 PF02472 Biopolymer transport protein ExbD/TolR SKTS_RS00245 PF01618 MotA/TolQ/ExbB proton channel family SKTS_RS00250 PF03544 Gram-negative bacterial TonB protein C-terminal SKTS_RS00275 PF01869 BadF/BadG/BcrA/BcrD ATPase family SKTS_RS00280 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component SKTS_RS00295 PF00593 TonB dependent receptor SKTS_RS00295 PF07715 TonB-dependent Receptor Plug Domain SKTS_RS00300 PF02472 Biopolymer transport protein ExbD/TolR SKTS_RS00305 PF01618 MotA/TolQ/ExbB proton channel family SKTS_RS00325 PF02322 Cytochrome bd terminal oxidase subunit II SKTS_RS00330 PF01654 Cytochrome bd terminal oxidase subunit I SKTS_RS00340 PF02954 Bacterial regulatory protein, Fis family SKTS_RS00340 PF00072 Response regulator receiver domain SKTS_RS00345 PF01814 Hemerythrin HHE cation binding domain SKTS_RS00350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS00350 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS00355 PF00072 Response regulator receiver domain SKTS_RS00355 PF02954 Bacterial regulatory protein, Fis family SKTS_RS00365 PF00005 ABC transporter SKTS_RS00365 PF12848 ABC transporter SKTS_RS00385 PF00589 Phage integrase family SKTS_RS00385 PF02899 Phage integrase, N-terminal SAM-like domain SKTS_RS00395 PF01678 Diaminopimelate epimerase SKTS_RS00400 PF13380 CoA binding domain SKTS_RS00410 PF05724 Thiopurine S-methyltransferase (TPMT) SKTS_RS00415 PF13098 Thioredoxin-like domain SKTS_RS00415 PF10411 Disulfide bond isomerase protein N-terminus SKTS_RS00420 PF01494 FAD binding domain SKTS_RS00425 PF01494 FAD binding domain SKTS_RS00430 PF05195 Aminopeptidase P, N-terminal domain SKTS_RS00430 PF00557 Metallopeptidase family M24 SKTS_RS00435 PF03330 Lytic transglycolase SKTS_RS00435 PF05036 Sporulation related domain SKTS_RS00440 PF07943 Penicillin-binding protein 5, C-terminal domain SKTS_RS00440 PF00768 D-alanyl-D-alanine carboxypeptidase SKTS_RS00445 PF01063 Amino-transferase class IV SKTS_RS00450 PF04359 Protein of unknown function (DUF493) SKTS_RS00455 PF03099 Biotin/lipoate A/B protein ligase family SKTS_RS00460 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family SKTS_RS00460 PF04055 Radical SAM superfamily SKTS_RS00465 PF07308 Protein of unknown function (DUF1456) SKTS_RS00500 PF00227 Proteasome subunit SKTS_RS00505 PF00004 ATPase family associated with various cellular activities (AAA) SKTS_RS00505 PF10431 C-terminal, D2-small domain, of ClpB protein SKTS_RS00505 PF07724 AAA domain (Cdc48 subfamily) SKTS_RS00515 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) SKTS_RS00520 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SKTS_RS00525 PF00535 Glycosyl transferase family 2 SKTS_RS00530 PF01370 NAD dependent epimerase/dehydratase family SKTS_RS00545 PF13609 Gram-negative porin SKTS_RS00555 PF02219 Methylenetetrahydrofolate reductase SKTS_RS00560 PF05221 S-adenosyl-L-homocysteine hydrolase SKTS_RS00560 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SKTS_RS00565 PF00438 S-adenosylmethionine synthetase, N-terminal domain SKTS_RS00565 PF02772 S-adenosylmethionine synthetase, central domain SKTS_RS00565 PF02773 S-adenosylmethionine synthetase, C-terminal domain SKTS_RS00575 PF00132 Bacterial transferase hexapeptide (six repeats) SKTS_RS00580 PF01432 Peptidase family M3 SKTS_RS00585 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS00600 PF00486 Transcriptional regulatory protein, C terminal SKTS_RS00600 PF00072 Response regulator receiver domain SKTS_RS00605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS00610 PF05362 Lon protease (S16) C-terminal proteolytic domain SKTS_RS00610 PF13654 AAA domain SKTS_RS00615 PF04305 Protein of unknown function (DUF455) SKTS_RS00640 PF01263 Aldose 1-epimerase SKTS_RS00645 PF01565 FAD binding domain SKTS_RS00645 PF02913 FAD linked oxidases, C-terminal domain SKTS_RS00650 PF01467 Cytidylyltransferase-like SKTS_RS00655 PF04972 BON domain SKTS_RS00660 PF13580 SIS domain SKTS_RS00665 PF02021 Uncharacterised protein family UPF0102 SKTS_RS00670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SKTS_RS00675 PF01979 Amidohydrolase family SKTS_RS00690 PF00211 Adenylate and Guanylate cyclase catalytic domain SKTS_RS00705 PF00120 Glutamine synthetase, catalytic domain SKTS_RS00705 PF03951 Glutamine synthetase, beta-Grasp domain SKTS_RS00710 PF16916 Dimerisation domain of Zinc Transporter SKTS_RS00710 PF01545 Cation efflux family SKTS_RS00720 PF08501 Shikimate dehydrogenase substrate binding domain SKTS_RS00720 PF01488 Shikimate / quinate 5-dehydrogenase SKTS_RS00720 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SKTS_RS00725 PF00912 Transglycosylase SKTS_RS00730 PF00218 Indole-3-glycerol phosphate synthase SKTS_RS00735 PF02885 Glycosyl transferase family, helical bundle domain SKTS_RS00735 PF00591 Glycosyl transferase family, a/b domain SKTS_RS00740 PF00117 Glutamine amidotransferase class-I SKTS_RS00755 PF02574 Homocysteine S-methyltransferase SKTS_RS00755 PF00809 Pterin binding enzyme SKTS_RS00755 PF02965 Vitamin B12 dependent methionine synthase, activation domain SKTS_RS00755 PF02607 B12 binding domain SKTS_RS00755 PF02310 B12 binding domain SKTS_RS00765 PF00563 EAL domain SKTS_RS00765 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS00765 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS00775 PF00563 EAL domain SKTS_RS00775 PF00360 Phytochrome region SKTS_RS00775 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS00775 PF01590 GAF domain SKTS_RS00795 PF01078 Magnesium chelatase, subunit ChlI SKTS_RS00795 PF13335 Magnesium chelatase, subunit ChlI C-terminal SKTS_RS00800 PF04380 Membrane fusogenic activity SKTS_RS00810 PF00543 Nitrogen regulatory protein P-II SKTS_RS00815 PF00909 Ammonium Transporter Family SKTS_RS00820 PF03180 NLPA lipoprotein SKTS_RS00825 PF00528 Binding-protein-dependent transport system inner membrane component SKTS_RS00830 PF00005 ABC transporter SKTS_RS00835 PF02633 Creatinine amidohydrolase SKTS_RS00840 PF00120 Glutamine synthetase, catalytic domain SKTS_RS00855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SKTS_RS00855 PF00289 Biotin carboxylase, N-terminal domain SKTS_RS00855 PF02785 Biotin carboxylase C-terminal domain SKTS_RS00860 PF01425 Amidase SKTS_RS00910 PF01555 DNA methylase SKTS_RS00920 PF00004 ATPase family associated with various cellular activities (AAA) SKTS_RS00920 PF05362 Lon protease (S16) C-terminal proteolytic domain SKTS_RS00920 PF02190 ATP-dependent protease La (LON) substrate-binding domain SKTS_RS00925 PF16473 3' exoribonuclease, RNase T-like SKTS_RS00955 PF01814 Hemerythrin HHE cation binding domain SKTS_RS00975 PF00753 Metallo-beta-lactamase superfamily SKTS_RS01015 PF01966 HD domain SKTS_RS01015 PF00072 Response regulator receiver domain SKTS_RS01020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS01020 PF08448 PAS fold SKTS_RS01020 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS01020 PF00072 Response regulator receiver domain SKTS_RS01020 PF13188 PAS domain SKTS_RS01040 PF01171 PP-loop family SKTS_RS01050 PF00773 RNB domain SKTS_RS01050 PF08206 Ribonuclease B OB domain SKTS_RS01050 PF17876 Cold shock domain SKTS_RS01050 PF00575 S1 RNA binding domain SKTS_RS01055 PF08245 Mur ligase middle domain SKTS_RS01055 PF02875 Mur ligase family, glutamate ligase domain SKTS_RS01055 PF01225 Mur ligase family, catalytic domain SKTS_RS01065 PF03372 Endonuclease/Exonuclease/phosphatase family SKTS_RS01080 PF03976 Polyphosphate kinase 2 (PPK2) SKTS_RS01085 PF00534 Glycosyl transferases group 1 SKTS_RS01085 PF13439 Glycosyltransferase Family 4 SKTS_RS01090 PF01569 PAP2 superfamily SKTS_RS01095 PF00534 Glycosyl transferases group 1 SKTS_RS01095 PF13439 Glycosyltransferase Family 4 SKTS_RS01100 PF01219 Prokaryotic diacylglycerol kinase SKTS_RS01105 PF01928 CYTH domain SKTS_RS01115 PF13090 Polyphosphate kinase C-terminal domain 2 SKTS_RS01115 PF13089 Polyphosphate kinase N-terminal domain SKTS_RS01115 PF17941 Polyphosphate kinase C-terminal domain 1 SKTS_RS01115 PF02503 Polyphosphate kinase middle domain SKTS_RS01120 PF04362 Bacterial Fe(2+) trafficking SKTS_RS01130 PF03279 Bacterial lipid A biosynthesis acyltransferase SKTS_RS01135 PF00271 Helicase conserved C-terminal domain SKTS_RS01135 PF00270 DEAD/DEAH box helicase SKTS_RS01145 PF04337 Protein of unknown function, DUF480 SKTS_RS01150 PF02321 Outer membrane efflux protein SKTS_RS01160 PF00581 Rhodanese-like domain SKTS_RS01170 PF01964 Radical SAM ThiC family SKTS_RS01170 PF13667 ThiC-associated domain SKTS_RS01175 PF02673 Bacitracin resistance protein BacA SKTS_RS01180 PF07194 P2 response regulator binding domain SKTS_RS01180 PF01627 Hpt domain SKTS_RS01180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS01180 PF02895 Signal transducing histidine kinase, homodimeric domain SKTS_RS01180 PF01584 CheW-like domain SKTS_RS01185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SKTS_RS01185 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term SKTS_RS01195 PF00072 Response regulator receiver domain SKTS_RS01200 PF00072 Response regulator receiver domain SKTS_RS01205 PF12849 PBP superfamily domain SKTS_RS01210 PF08543 Phosphomethylpyrimidine kinase SKTS_RS01215 PF02581 Thiamine monophosphate synthase SKTS_RS01220 PF00202 Aminotransferase class-III SKTS_RS01230 PF09967 VWA-like domain (DUF2201) SKTS_RS01230 PF13203 Putative metallopeptidase domain SKTS_RS01240 PF17804 Tail specific protease N-terminal domain SKTS_RS01240 PF00595 PDZ domain SKTS_RS01240 PF11818 C-terminal domain of tail specific protease (DUF3340) SKTS_RS01240 PF03572 Peptidase family S41 SKTS_RS01245 PF01578 Cytochrome C assembly protein SKTS_RS01250 PF05140 ResB-like family SKTS_RS01255 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SKTS_RS01260 PF01926 50S ribosome-binding GTPase SKTS_RS01265 PF00291 Pyridoxal-phosphate dependent enzyme SKTS_RS01270 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain SKTS_RS01280 PF02622 Uncharacterized ACR, COG1678 SKTS_RS01285 PF03652 Holliday junction resolvase SKTS_RS01290 PF00156 Phosphoribosyl transferase domain SKTS_RS01295 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SKTS_RS01295 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SKTS_RS01300 PF01979 Amidohydrolase family SKTS_RS01305 PF00011 Hsp20/alpha crystallin family SKTS_RS01310 PF00696 Amino acid kinase family SKTS_RS01320 PF00440 Bacterial regulatory proteins, tetR family SKTS_RS01325 PF00899 ThiF family SKTS_RS01330 PF13180 PDZ domain SKTS_RS01330 PF03572 Peptidase family S41 SKTS_RS01335 PF01551 Peptidase family M23 SKTS_RS01340 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SKTS_RS01340 PF01676 Metalloenzyme superfamily SKTS_RS01360 PF00873 AcrB/AcrD/AcrF family SKTS_RS01370 PF00581 Rhodanese-like domain SKTS_RS01375 PF00462 Glutaredoxin SKTS_RS01380 PF00085 Thioredoxin SKTS_RS01385 PF02556 Preprotein translocase subunit SecB SKTS_RS01395 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SKTS_RS01395 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SKTS_RS01400 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS01400 PF00072 Response regulator receiver domain SKTS_RS01405 PF00588 SpoU rRNA Methylase family SKTS_RS01410 PF00437 Type II/IV secretion system protein SKTS_RS01410 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SKTS_RS01420 PF00482 Type II secretion system (T2SS), protein F SKTS_RS01430 PF07963 Prokaryotic N-terminal methylation motif SKTS_RS01430 PF00114 Pilin (bacterial filament) SKTS_RS01435 PF00114 Pilin (bacterial filament) SKTS_RS01435 PF07963 Prokaryotic N-terminal methylation motif SKTS_RS01440 PF07963 Prokaryotic N-terminal methylation motif SKTS_RS01440 PF00114 Pilin (bacterial filament) SKTS_RS01485 PF00263 Bacterial type II and III secretion system protein SKTS_RS01485 PF03958 Bacterial type II/III secretion system short domain SKTS_RS01490 PF13401 AAA domain SKTS_RS01490 PF01471 Putative peptidoglycan binding domain SKTS_RS01500 PF00156 Phosphoribosyl transferase domain SKTS_RS01510 PF04055 Radical SAM superfamily SKTS_RS01510 PF06968 Biotin and Thiamin Synthesis associated domain SKTS_RS01515 PF00155 Aminotransferase class I and II SKTS_RS01520 PF00561 alpha/beta hydrolase fold SKTS_RS01525 PF08241 Methyltransferase domain SKTS_RS01535 PF02082 Transcriptional regulator SKTS_RS01540 PF00027 Cyclic nucleotide-binding domain SKTS_RS01540 PF13545 Crp-like helix-turn-helix domain SKTS_RS01550 PF00115 Cytochrome C and Quinol oxidase polypeptide I SKTS_RS01565 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP SKTS_RS01565 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SKTS_RS01570 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase SKTS_RS01570 PF13746 4Fe-4S dicluster domain SKTS_RS01570 PF12801 4Fe-4S binding domain SKTS_RS01580 PF00403 Heavy-metal-associated domain SKTS_RS01590 PF04545 Sigma-70, region 4 SKTS_RS01590 PF00140 Sigma-70 factor, region 1.2 SKTS_RS01590 PF04542 Sigma-70 region 2 SKTS_RS01595 PF13545 Crp-like helix-turn-helix domain SKTS_RS01595 PF00027 Cyclic nucleotide-binding domain SKTS_RS01600 PF00072 Response regulator receiver domain SKTS_RS01600 PF00196 Bacterial regulatory proteins, luxR family SKTS_RS01605 PF00072 Response regulator receiver domain SKTS_RS01615 PF00111 2Fe-2S iron-sulfur cluster binding domain SKTS_RS01625 PF02965 Vitamin B12 dependent methionine synthase, activation domain SKTS_RS01625 PF02574 Homocysteine S-methyltransferase SKTS_RS01625 PF02310 B12 binding domain SKTS_RS01625 PF02607 B12 binding domain SKTS_RS01625 PF00809 Pterin binding enzyme SKTS_RS01635 PF18075 FtsX extracellular domain SKTS_RS01640 PF00005 ABC transporter SKTS_RS01645 PF04715 Anthranilate synthase component I, N terminal region SKTS_RS01645 PF00425 chorismate binding enzyme SKTS_RS01650 PF13419 Haloacid dehalogenase-like hydrolase SKTS_RS01655 PF00834 Ribulose-phosphate 3 epimerase family SKTS_RS01660 PF01790 Prolipoprotein diacylglyceryl transferase SKTS_RS01665 PF08447 PAS fold SKTS_RS01665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SKTS_RS01670 PF13426 PAS domain SKTS_RS01670 PF08447 PAS fold SKTS_RS01670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SKTS_RS01680 PF00920 Dehydratase family SKTS_RS01690 PF03190 Protein of unknown function, DUF255 SKTS_RS01695 PF00034 Cytochrome c SKTS_RS01700 PF13458 Periplasmic binding protein SKTS_RS01705 PF02653 Branched-chain amino acid transport system / permease component SKTS_RS01710 PF02653 Branched-chain amino acid transport system / permease component SKTS_RS01710 PF11862 Domain of unknown function (DUF3382) SKTS_RS01715 PF12399 Branched-chain amino acid ATP-binding cassette transporter SKTS_RS01715 PF00005 ABC transporter SKTS_RS01720 PF00005 ABC transporter SKTS_RS01740 PF09587 Bacterial capsule synthesis protein PGA_cap SKTS_RS01750 PF01966 HD domain SKTS_RS01750 PF13286 Phosphohydrolase-associated domain SKTS_RS01755 PF05231 MASE1 SKTS_RS01755 PF00563 EAL domain SKTS_RS01755 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS01755 PF08447 PAS fold SKTS_RS01755 PF13426 PAS domain SKTS_RS01755 PF08448 PAS fold SKTS_RS01760 PF01761 3-dehydroquinate synthase SKTS_RS01770 PF00091 Tubulin/FtsZ family, GTPase domain SKTS_RS01770 PF12327 FtsZ family, C-terminal domain SKTS_RS01775 PF02491 SHS2 domain inserted in FTSA SKTS_RS01780 PF08478 POTRA domain, FtsQ-type SKTS_RS01780 PF03799 Cell division protein FtsQ SKTS_RS01785 PF01820 D-ala D-ala ligase N-terminus SKTS_RS01785 PF07478 D-ala D-ala ligase C-terminus SKTS_RS01790 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SKTS_RS01790 PF01565 FAD binding domain SKTS_RS01795 PF01225 Mur ligase family, catalytic domain SKTS_RS01795 PF02875 Mur ligase family, glutamate ligase domain SKTS_RS01795 PF08245 Mur ligase middle domain SKTS_RS01800 PF04101 Glycosyltransferase family 28 C-terminal domain SKTS_RS01800 PF03033 Glycosyltransferase family 28 N-terminal domain SKTS_RS01805 PF01098 Cell cycle protein SKTS_RS01810 PF02875 Mur ligase family, glutamate ligase domain SKTS_RS01810 PF08245 Mur ligase middle domain SKTS_RS01815 PF00953 Glycosyl transferase family 4 SKTS_RS01815 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SKTS_RS01820 PF08245 Mur ligase middle domain SKTS_RS01820 PF01225 Mur ligase family, catalytic domain SKTS_RS01820 PF02875 Mur ligase family, glutamate ligase domain SKTS_RS01825 PF01225 Mur ligase family, catalytic domain SKTS_RS01825 PF02875 Mur ligase family, glutamate ligase domain SKTS_RS01825 PF08245 Mur ligase middle domain SKTS_RS01830 PF00905 Penicillin binding protein transpeptidase domain SKTS_RS01830 PF03717 Penicillin-binding Protein dimerisation domain SKTS_RS01840 PF01795 MraW methylase family SKTS_RS01845 PF02381 MraZ protein, putative antitoxin-like SKTS_RS01860 PF00633 Helix-hairpin-helix motif SKTS_RS01860 PF14815 NUDIX domain SKTS_RS01860 PF00730 HhH-GPD superfamily base excision DNA repair protein SKTS_RS01870 PF01026 TatD related DNase SKTS_RS01875 PF01545 Cation efflux family SKTS_RS01875 PF16916 Dimerisation domain of Zinc Transporter SKTS_RS01880 PF00899 ThiF family SKTS_RS01885 PF12804 MobA-like NTP transferase domain SKTS_RS01890 PF00355 Rieske [2Fe-2S] domain SKTS_RS01890 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal SKTS_RS01895 PF00032 Cytochrome b(C-terminal)/b6/petD SKTS_RS01895 PF00033 Cytochrome b/b6/petB SKTS_RS01900 PF02167 Cytochrome C1 family SKTS_RS01905 PF00043 Glutathione S-transferase, C-terminal domain SKTS_RS01905 PF02798 Glutathione S-transferase, N-terminal domain SKTS_RS01910 PF04386 Stringent starvation protein B SKTS_RS01920 PF00731 AIR carboxylase SKTS_RS01925 PF01259 SAICAR synthetase SKTS_RS01940 PF00092 von Willebrand factor type A domain SKTS_RS01945 PF08406 CbbQ/NirQ/NorQ C-terminal SKTS_RS01945 PF07728 AAA domain (dynein-related subfamily) SKTS_RS01950 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain SKTS_RS01950 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain SKTS_RS01955 PF03466 LysR substrate binding domain SKTS_RS01955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SKTS_RS01960 PF02954 Bacterial regulatory protein, Fis family SKTS_RS01960 PF00072 Response regulator receiver domain SKTS_RS01960 PF00158 Sigma-54 interaction domain SKTS_RS01965 PF00989 PAS fold SKTS_RS01965 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS01965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS01980 PF00572 Ribosomal protein L13 SKTS_RS01985 PF00380 Ribosomal protein S9/S16 SKTS_RS01990 PF01118 Semialdehyde dehydrogenase, NAD binding domain SKTS_RS01990 PF02774 Semialdehyde dehydrogenase, dimerisation domain SKTS_RS02005 PF01521 Iron-sulphur cluster biosynthesis SKTS_RS02010 PF03702 Anhydro-N-acetylmuramic acid kinase SKTS_RS02015 PF01551 Peptidase family M23 SKTS_RS02020 PF00579 tRNA synthetases class I (W and Y) SKTS_RS02020 PF01479 S4 domain SKTS_RS02050 PF04055 Radical SAM superfamily SKTS_RS02050 PF01938 TRAM domain SKTS_RS02050 PF00919 Uncharacterized protein family UPF0004 SKTS_RS02055 PF02562 PhoH-like protein SKTS_RS02060 PF02130 Uncharacterized protein family UPF0054 SKTS_RS02065 PF03471 Transporter associated domain SKTS_RS02065 PF00571 CBS domain SKTS_RS02070 PF02390 Putative methyltransferase SKTS_RS02075 PF05690 Thiazole biosynthesis protein ThiG SKTS_RS02080 PF05690 Thiazole biosynthesis protein ThiG SKTS_RS02080 PF02597 ThiS family SKTS_RS02085 PF00296 Luciferase-like monooxygenase SKTS_RS02090 PF00005 ABC transporter SKTS_RS02095 PF02405 Permease MlaE SKTS_RS02100 PF02470 MlaD protein SKTS_RS02120 PF00005 ABC transporter SKTS_RS02125 PF01061 ABC-2 type transporter SKTS_RS02130 PF01722 BolA-like protein SKTS_RS02135 PF00462 Glutaredoxin SKTS_RS02140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SKTS_RS02145 PF01634 ATP phosphoribosyltransferase SKTS_RS02150 PF00815 Histidinol dehydrogenase SKTS_RS02155 PF00155 Aminotransferase class I and II SKTS_RS02160 PF00475 Imidazoleglycerol-phosphate dehydratase SKTS_RS02165 PF00117 Glutamine amidotransferase class-I SKTS_RS02170 PF00977 Histidine biosynthesis protein SKTS_RS02175 PF00977 Histidine biosynthesis protein SKTS_RS02180 PF01502 Phosphoribosyl-AMP cyclohydrolase SKTS_RS02185 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SKTS_RS02195 PF02416 mttA/Hcf106 family SKTS_RS02200 PF02416 mttA/Hcf106 family SKTS_RS02205 PF00902 Sec-independent protein translocase protein (TatC) SKTS_RS02210 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS02215 PF17820 PDZ domain SKTS_RS02215 PF13180 PDZ domain SKTS_RS02220 PF01784 NIF3 (NGG1p interacting factor 3) SKTS_RS02225 PF02954 Bacterial regulatory protein, Fis family SKTS_RS02225 PF00158 Sigma-54 interaction domain SKTS_RS02225 PF00072 Response regulator receiver domain SKTS_RS02230 PF13401 AAA domain SKTS_RS02230 PF01471 Putative peptidoglycan binding domain SKTS_RS02235 PF03958 Bacterial type II/III secretion system short domain SKTS_RS02235 PF00263 Bacterial type II and III secretion system protein SKTS_RS02245 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SKTS_RS02245 PF00437 Type II/IV secretion system protein SKTS_RS02250 PF00482 Type II secretion system (T2SS), protein F SKTS_RS02280 PF01523 Putative modulator of DNA gyrase SKTS_RS02285 PF04751 Protein of unknown function (DUF615) SKTS_RS02290 PF01960 ArgJ family SKTS_RS02295 PF00005 ABC transporter SKTS_RS02295 PF06472 ABC transporter transmembrane region 2 SKTS_RS02300 PF00293 NUDIX domain SKTS_RS02305 PF03884 DNA gyrase inhibitor YacG SKTS_RS02310 PF07072 Cell division protein SKTS_RS02335 PF02872 5'-nucleotidase, C-terminal domain SKTS_RS02335 PF00149 Calcineurin-like phosphoesterase SKTS_RS02345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SKTS_RS02350 PF12704 MacB-like periplasmic core domain SKTS_RS02350 PF00005 ABC transporter SKTS_RS02350 PF02687 FtsX-like permease family SKTS_RS02355 PF12704 MacB-like periplasmic core domain SKTS_RS02355 PF02687 FtsX-like permease family SKTS_RS02355 PF00005 ABC transporter SKTS_RS02370 PF02660 Glycerol-3-phosphate acyltransferase SKTS_RS02380 PF00814 Glycoprotease family SKTS_RS02385 PF00202 Aminotransferase class-III SKTS_RS02400 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SKTS_RS02400 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SKTS_RS02405 PF00166 Chaperonin 10 Kd subunit SKTS_RS02410 PF00118 TCP-1/cpn60 chaperonin family SKTS_RS02415 PF01165 Ribosomal protein S21 SKTS_RS02425 PF01807 CHC2 zinc finger SKTS_RS02425 PF08275 DNA primase catalytic core, N-terminal domain SKTS_RS02425 PF08278 DNA primase DnaG DnaB-binding SKTS_RS02425 PF10410 DnaB-helicase binding domain of primase SKTS_RS02430 PF03979 Sigma-70 factor, region 1.1 SKTS_RS02430 PF00140 Sigma-70 factor, region 1.2 SKTS_RS02430 PF04545 Sigma-70, region 4 SKTS_RS02430 PF04539 Sigma-70 region 3 SKTS_RS02430 PF04546 Sigma-70, non-essential region SKTS_RS02430 PF04542 Sigma-70 region 2 SKTS_RS02450 PF00216 Bacterial DNA-binding protein SKTS_RS02455 PF00248 Aldo/keto reductase family SKTS_RS02460 PF08241 Methyltransferase domain SKTS_RS02465 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV SKTS_RS02485 PF13722 5TM C-terminal transporter carbon starvation CstA SKTS_RS02485 PF02554 Carbon starvation protein CstA SKTS_RS02490 PF07885 Ion channel SKTS_RS02490 PF02254 TrkA-N domain SKTS_RS02495 PF00464 Serine hydroxymethyltransferase SKTS_RS02500 PF03477 ATP cone domain SKTS_RS02505 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SKTS_RS02505 PF01872 RibD C-terminal domain SKTS_RS02510 PF00677 Lumazine binding domain SKTS_RS02515 PF00925 GTP cyclohydrolase II SKTS_RS02515 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SKTS_RS02520 PF00885 6,7-dimethyl-8-ribityllumazine synthase SKTS_RS02525 PF01029 NusB family SKTS_RS02530 PF01769 Divalent cation transporter SKTS_RS02530 PF03448 MgtE intracellular N domain SKTS_RS02530 PF00571 CBS domain SKTS_RS02535 PF01168 Alanine racemase, N-terminal domain SKTS_RS02540 PF00437 Type II/IV secretion system protein SKTS_RS02545 PF00437 Type II/IV secretion system protein SKTS_RS02555 PF02926 THUMP domain SKTS_RS02555 PF01170 Putative RNA methylase family UPF0020 SKTS_RS02560 PF00501 AMP-binding enzyme SKTS_RS02565 PF03653 Uncharacterised protein family (UPF0093) SKTS_RS02570 PF00578 AhpC/TSA family SKTS_RS02580 PF00578 AhpC/TSA family SKTS_RS02585 PF00483 Nucleotidyl transferase SKTS_RS02590 PF01636 Phosphotransferase enzyme family SKTS_RS02595 PF04453 LPS transport system D SKTS_RS02600 PF00639 PPIC-type PPIASE domain SKTS_RS02600 PF09312 SurA N-terminal domain SKTS_RS02605 PF04166 Pyridoxal phosphate biosynthetic protein PdxA SKTS_RS02610 PF00398 Ribosomal RNA adenine dimethylase SKTS_RS02615 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS02615 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS02615 PF00563 EAL domain SKTS_RS02620 PF00672 HAMP domain SKTS_RS02620 PF02743 Cache domain SKTS_RS02620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SKTS_RS02625 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SKTS_RS02645 PF05746 DALR anticodon binding domain SKTS_RS02645 PF02092 Glycyl-tRNA synthetase beta subunit SKTS_RS02650 PF02091 Glycyl-tRNA synthetase alpha subunit SKTS_RS02660 PF01541 GIY-YIG catalytic domain SKTS_RS02665 PF00795 Carbon-nitrogen hydrolase SKTS_RS02670 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SKTS_RS02670 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SKTS_RS02675 PF01491 Frataxin-like domain SKTS_RS02680 PF00072 Response regulator receiver domain SKTS_RS02695 PF14698 Argininosuccinate lyase C-terminal SKTS_RS02695 PF00206 Lyase SKTS_RS02700 PF13492 GAF domain SKTS_RS02700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS02700 PF06580 Histidine kinase SKTS_RS02700 PF07694 5TMR of 5TMR-LYT SKTS_RS02705 PF00072 Response regulator receiver domain SKTS_RS02705 PF04397 LytTr DNA-binding domain SKTS_RS02725 PF00009 Elongation factor Tu GTP binding domain SKTS_RS02725 PF03144 Elongation factor Tu domain 2 SKTS_RS02725 PF03143 Elongation factor Tu C-terminal domain SKTS_RS02735 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SKTS_RS02740 PF00467 KOW motif SKTS_RS02740 PF02357 Transcription termination factor nusG SKTS_RS02745 PF00298 Ribosomal protein L11, RNA binding domain SKTS_RS02745 PF03946 Ribosomal protein L11, N-terminal domain SKTS_RS02750 PF00687 Ribosomal protein L1p/L10e family SKTS_RS02755 PF00466 Ribosomal protein L10 SKTS_RS02760 PF00542 Ribosomal protein L7/L12 C-terminal domain SKTS_RS02760 PF16320 Ribosomal protein L7/L12 dimerisation domain SKTS_RS02765 PF04563 RNA polymerase beta subunit SKTS_RS02765 PF04560 RNA polymerase Rpb2, domain 7 SKTS_RS02765 PF00562 RNA polymerase Rpb2, domain 6 SKTS_RS02765 PF10385 RNA polymerase beta subunit external 1 domain SKTS_RS02765 PF04565 RNA polymerase Rpb2, domain 3 SKTS_RS02765 PF04561 RNA polymerase Rpb2, domain 2 SKTS_RS02770 PF04983 RNA polymerase Rpb1, domain 3 SKTS_RS02770 PF04998 RNA polymerase Rpb1, domain 5 SKTS_RS02770 PF05000 RNA polymerase Rpb1, domain 4 SKTS_RS02770 PF00623 RNA polymerase Rpb1, domain 2 SKTS_RS02770 PF04997 RNA polymerase Rpb1, domain 1 SKTS_RS02775 PF00164 Ribosomal protein S12/S23 SKTS_RS02780 PF00177 Ribosomal protein S7p/S5e SKTS_RS02785 PF00679 Elongation factor G C-terminus SKTS_RS02785 PF14492 Elongation Factor G, domain II SKTS_RS02785 PF03764 Elongation factor G, domain IV SKTS_RS02785 PF03144 Elongation factor Tu domain 2 SKTS_RS02785 PF00009 Elongation factor Tu GTP binding domain SKTS_RS02790 PF03144 Elongation factor Tu domain 2 SKTS_RS02790 PF03143 Elongation factor Tu C-terminal domain SKTS_RS02790 PF00009 Elongation factor Tu GTP binding domain SKTS_RS02795 PF00338 Ribosomal protein S10p/S20e SKTS_RS02800 PF00297 Ribosomal protein L3 SKTS_RS02805 PF00573 Ribosomal protein L4/L1 family SKTS_RS02810 PF00276 Ribosomal protein L23 SKTS_RS02815 PF03947 Ribosomal Proteins L2, C-terminal domain SKTS_RS02815 PF00181 Ribosomal Proteins L2, RNA binding domain SKTS_RS02820 PF00203 Ribosomal protein S19 SKTS_RS02825 PF00237 Ribosomal protein L22p/L17e SKTS_RS02830 PF07650 KH domain SKTS_RS02830 PF00189 Ribosomal protein S3, C-terminal domain SKTS_RS02835 PF00252 Ribosomal protein L16p/L10e SKTS_RS02840 PF00831 Ribosomal L29 protein SKTS_RS02845 PF00366 Ribosomal protein S17 SKTS_RS02850 PF00238 Ribosomal protein L14p/L23e SKTS_RS02855 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SKTS_RS02855 PF00467 KOW motif SKTS_RS02860 PF00673 ribosomal L5P family C-terminus SKTS_RS02860 PF00281 Ribosomal protein L5 SKTS_RS02865 PF00253 Ribosomal protein S14p/S29e SKTS_RS02870 PF00410 Ribosomal protein S8 SKTS_RS02875 PF00347 Ribosomal protein L6 SKTS_RS02880 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SKTS_RS02885 PF03719 Ribosomal protein S5, C-terminal domain SKTS_RS02885 PF00333 Ribosomal protein S5, N-terminal domain SKTS_RS02890 PF00327 Ribosomal protein L30p/L7e SKTS_RS02895 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SKTS_RS02900 PF00344 SecY translocase SKTS_RS02905 PF01176 Translation initiation factor 1A / IF-1 SKTS_RS02910 PF00444 Ribosomal protein L36 SKTS_RS02915 PF00416 Ribosomal protein S13/S18 SKTS_RS02920 PF00411 Ribosomal protein S11 SKTS_RS02925 PF00163 Ribosomal protein S4/S9 N-terminal domain SKTS_RS02925 PF01479 S4 domain SKTS_RS02930 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SKTS_RS02930 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SKTS_RS02930 PF01000 RNA polymerase Rpb3/RpoA insert domain SKTS_RS02935 PF01196 Ribosomal protein L17 SKTS_RS02945 PF17760 UvrA interaction domain SKTS_RS02945 PF17755 UvrA DNA-binding domain SKTS_RS02950 PF07690 Major Facilitator Superfamily SKTS_RS02955 PF00436 Single-strand binding protein family SKTS_RS02970 PF00152 tRNA synthetases class II (D, K and N) SKTS_RS02970 PF01336 OB-fold nucleic acid binding domain SKTS_RS02970 PF02938 GAD domain SKTS_RS02975 PF00581 Rhodanese-like domain SKTS_RS02980 PF00293 NUDIX domain SKTS_RS02985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SKTS_RS02985 PF03466 LysR substrate binding domain SKTS_RS02990 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain SKTS_RS02990 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain SKTS_RS02995 PF00101 Ribulose bisphosphate carboxylase, small chain SKTS_RS03000 PF08406 CbbQ/NirQ/NorQ C-terminal SKTS_RS03000 PF07728 AAA domain (dynein-related subfamily) SKTS_RS03015 PF00484 Carbonic anhydrase SKTS_RS03020 PF00731 AIR carboxylase SKTS_RS03025 PF01116 Fructose-bisphosphate aldolase class-II SKTS_RS03030 PF02445 Quinolinate synthetase A protein SKTS_RS03035 PF12392 Collagenase SKTS_RS03035 PF01136 Peptidase family U32 SKTS_RS03040 PF00664 ABC transporter transmembrane region SKTS_RS03040 PF00005 ABC transporter SKTS_RS03050 PF04480 Protein of unknown function (DUF559) SKTS_RS03055 PF01253 Translation initiation factor SUI1 SKTS_RS03060 PF00072 Response regulator receiver domain SKTS_RS03065 PF01625 Peptide methionine sulfoxide reductase SKTS_RS03080 PF01554 MatE SKTS_RS03085 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB SKTS_RS03090 PF01381 Helix-turn-helix SKTS_RS03095 PF01068 ATP dependent DNA ligase domain SKTS_RS03095 PF04679 ATP dependent DNA ligase C terminal region SKTS_RS03095 PF13298 DNA polymerase Ligase (LigD) SKTS_RS03100 PF02735 Ku70/Ku80 beta-barrel domain SKTS_RS03105 PF02735 Ku70/Ku80 beta-barrel domain SKTS_RS03110 PF01641 SelR domain SKTS_RS03120 PF02696 Uncharacterized ACR, YdiU/UPF0061 family SKTS_RS03155 PF03372 Endonuclease/Exonuclease/phosphatase family SKTS_RS03160 PF13091 PLD-like domain SKTS_RS03165 PF12832 MFS_1 like family SKTS_RS03175 PF02910 Fumarate reductase flavoprotein C-term SKTS_RS03175 PF00890 FAD binding domain SKTS_RS03190 PF02754 Cysteine-rich domain SKTS_RS03200 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SKTS_RS03200 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SKTS_RS03200 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SKTS_RS03205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SKTS_RS03215 PF01593 Flavin containing amine oxidoreductase SKTS_RS03235 PF00175 Oxidoreductase NAD-binding domain SKTS_RS03235 PF00111 2Fe-2S iron-sulfur cluster binding domain SKTS_RS03235 PF00970 Oxidoreductase FAD-binding domain SKTS_RS03240 PF01264 Chorismate synthase SKTS_RS03250 PF00106 short chain dehydrogenase SKTS_RS03255 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS03255 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS03255 PF00563 EAL domain SKTS_RS03260 PF12729 Four helix bundle sensory module for signal transduction SKTS_RS03260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SKTS_RS03260 PF00672 HAMP domain SKTS_RS03265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SKTS_RS03265 PF08447 PAS fold SKTS_RS03280 PF00211 Adenylate and Guanylate cyclase catalytic domain SKTS_RS03295 PF03755 YicC-like family, N-terminal region SKTS_RS03295 PF08340 Domain of unknown function (DUF1732) SKTS_RS03300 PF00805 Pentapeptide repeats (8 copies) SKTS_RS03300 PF00069 Protein kinase domain SKTS_RS03310 PF03725 3' exoribonuclease family, domain 2 SKTS_RS03310 PF01138 3' exoribonuclease family, domain 1 SKTS_RS03315 PF01725 Ham1 family SKTS_RS03320 PF00857 Isochorismatase family SKTS_RS03325 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SKTS_RS03325 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SKTS_RS03330 PF06969 HemN C-terminal domain SKTS_RS03330 PF04055 Radical SAM superfamily SKTS_RS03335 PF01966 HD domain SKTS_RS03360 PF07726 ATPase family associated with various cellular activities (AAA) SKTS_RS03360 PF17863 AAA lid domain SKTS_RS03380 PF16925 Tetracyclin repressor-like, C-terminal domain SKTS_RS03380 PF00440 Bacterial regulatory proteins, tetR family SKTS_RS03390 PF00881 Nitroreductase family SKTS_RS03395 PF01227 GTP cyclohydrolase I SKTS_RS03400 PF01475 Ferric uptake regulator family SKTS_RS03420 PF00121 Triosephosphate isomerase SKTS_RS03425 PF03840 Preprotein translocase SecG subunit SKTS_RS03435 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 SKTS_RS03440 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SKTS_RS03445 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SKTS_RS03450 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SKTS_RS03460 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SKTS_RS03460 PF10531 SLBB domain SKTS_RS03460 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SKTS_RS03465 PF00384 Molybdopterin oxidoreductase SKTS_RS03465 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal SKTS_RS03465 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SKTS_RS03470 PF00146 NADH dehydrogenase SKTS_RS03475 PF12838 4Fe-4S dicluster domain SKTS_RS03480 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SKTS_RS03485 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SKTS_RS03490 PF00361 Proton-conducting membrane transporter SKTS_RS03490 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SKTS_RS03495 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus SKTS_RS03495 PF00361 Proton-conducting membrane transporter SKTS_RS03500 PF00361 Proton-conducting membrane transporter SKTS_RS03510 PF00293 NUDIX domain SKTS_RS03515 PF02405 Permease MlaE SKTS_RS03520 PF00005 ABC transporter SKTS_RS03535 PF05872 Bacterial protein of unknown function (DUF853) SKTS_RS03540 PF01709 Transcriptional regulator SKTS_RS03545 PF02075 Crossover junction endodeoxyribonuclease RuvC SKTS_RS03550 PF07499 RuvA, C-terminal domain SKTS_RS03550 PF01330 RuvA N terminal domain SKTS_RS03565 PF05491 RuvB C-terminal winged helix domain SKTS_RS03565 PF17864 RuvB AAA lid domain SKTS_RS03565 PF05496 Holliday junction DNA helicase RuvB P-loop domain SKTS_RS03570 PF03061 Thioesterase superfamily SKTS_RS03575 PF01618 MotA/TolQ/ExbB proton channel family SKTS_RS03580 PF02472 Biopolymer transport protein ExbD/TolR SKTS_RS03590 PF07676 WD40-like Beta Propeller Repeat SKTS_RS03590 PF04052 TolB amino-terminal domain SKTS_RS03595 PF00691 OmpA family SKTS_RS03605 PF04055 Radical SAM superfamily SKTS_RS03610 PF06508 Queuosine biosynthesis protein QueC SKTS_RS03620 PF02401 LytB protein SKTS_RS03625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SKTS_RS03630 PF01252 Signal peptidase (SPase) II SKTS_RS03635 PF08264 Anticodon-binding domain of tRNA SKTS_RS03635 PF00133 tRNA synthetases class I (I, L, M and V) SKTS_RS03635 PF06827 Zinc finger found in FPG and IleRS SKTS_RS03640 PF01687 Riboflavin kinase SKTS_RS03640 PF06574 FAD synthetase SKTS_RS03645 PF03023 Lipid II flippase MurJ SKTS_RS03650 PF01597 Glycine cleavage H-protein SKTS_RS03655 PF00291 Pyridoxal-phosphate dependent enzyme SKTS_RS03660 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS03670 PF01370 NAD dependent epimerase/dehydratase family SKTS_RS03675 PF00294 pfkB family carbohydrate kinase SKTS_RS03680 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SKTS_RS03680 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SKTS_RS03680 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SKTS_RS03685 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SKTS_RS03690 PF18073 Rubredoxin metal binding domain SKTS_RS03700 PF00216 Bacterial DNA-binding protein SKTS_RS03705 PF00575 S1 RNA binding domain SKTS_RS03710 PF02224 Cytidylate kinase SKTS_RS03715 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SKTS_RS03720 PF01842 ACT domain SKTS_RS03720 PF02153 Prephenate dehydrogenase SKTS_RS03725 PF18152 DAHP synthase ferredoxin-like domain SKTS_RS03725 PF00793 DAHP synthetase I family SKTS_RS03730 PF00155 Aminotransferase class I and II SKTS_RS03735 PF01842 ACT domain SKTS_RS03735 PF01817 Chorismate mutase type II SKTS_RS03735 PF00800 Prephenate dehydratase SKTS_RS03740 PF00266 Aminotransferase class-V SKTS_RS03745 PF03989 DNA gyrase C-terminal domain, beta-propeller SKTS_RS03745 PF00521 DNA gyrase/topoisomerase IV, subunit A SKTS_RS03760 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) SKTS_RS03765 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold SKTS_RS03765 PF04408 Helicase associated domain (HA2) SKTS_RS03765 PF11898 Domain of unknown function (DUF3418) SKTS_RS03765 PF00271 Helicase conserved C-terminal domain SKTS_RS03765 PF00270 DEAD/DEAH box helicase SKTS_RS03780 PF01027 Inhibitor of apoptosis-promoting Bax1 SKTS_RS03785 PF00696 Amino acid kinase family SKTS_RS03785 PF01472 PUA domain SKTS_RS03790 PF01018 GTP1/OBG SKTS_RS03790 PF01926 50S ribosome-binding GTPase SKTS_RS03795 PF01016 Ribosomal L27 protein SKTS_RS03800 PF00829 Ribosomal prokaryotic L21 protein SKTS_RS03805 PF00348 Polyprenyl synthetase SKTS_RS03815 PF00072 Response regulator receiver domain SKTS_RS03815 PF02954 Bacterial regulatory protein, Fis family SKTS_RS03815 PF00158 Sigma-54 interaction domain SKTS_RS03825 PF07992 Pyridine nucleotide-disulphide oxidoreductase SKTS_RS03850 PF00403 Heavy-metal-associated domain SKTS_RS03860 PF00115 Cytochrome C and Quinol oxidase polypeptide I SKTS_RS03875 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SKTS_RS03875 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP SKTS_RS03880 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase SKTS_RS03880 PF13746 4Fe-4S dicluster domain SKTS_RS03880 PF12801 4Fe-4S binding domain SKTS_RS03895 PF00027 Cyclic nucleotide-binding domain SKTS_RS03895 PF13545 Crp-like helix-turn-helix domain SKTS_RS03900 PF08331 Domain of unknown function (DUF1730) SKTS_RS03905 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SKTS_RS03910 PF11741 AMIN domain SKTS_RS03910 PF01520 N-acetylmuramoyl-L-alanine amidase SKTS_RS03955 PF13356 Arm DNA-binding domain SKTS_RS03955 PF00589 Phage integrase family SKTS_RS03965 PF13419 Haloacid dehalogenase-like hydrolase SKTS_RS03975 PF01979 Amidohydrolase family SKTS_RS03980 PF00691 OmpA family SKTS_RS03990 PF01197 Ribosomal protein L31 SKTS_RS04000 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SKTS_RS04015 PF01875 Memo-like protein SKTS_RS04020 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SKTS_RS04025 PF02542 YgbB family SKTS_RS04040 PF00581 Rhodanese-like domain SKTS_RS04045 PF02769 AIR synthase related protein, C-terminal domain SKTS_RS04045 PF00586 AIR synthase related protein, N-terminal domain SKTS_RS04055 PF00072 Response regulator receiver domain SKTS_RS04055 PF00486 Transcriptional regulatory protein, C terminal SKTS_RS04060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS04060 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS04060 PF00672 HAMP domain SKTS_RS04065 PF00072 Response regulator receiver domain SKTS_RS04065 PF00196 Bacterial regulatory proteins, luxR family SKTS_RS04070 PF13188 PAS domain SKTS_RS04070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS04070 PF13426 PAS domain SKTS_RS04085 PF00563 EAL domain SKTS_RS04085 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS04085 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS04095 PF00593 TonB dependent receptor SKTS_RS04095 PF07660 Secretin and TonB N terminus short domain SKTS_RS04095 PF07715 TonB-dependent Receptor Plug Domain SKTS_RS04105 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 SKTS_RS04130 PF04381 Putative exonuclease, RdgC SKTS_RS04145 PF11799 impB/mucB/samB family C-terminal domain SKTS_RS04145 PF13438 Domain of unknown function (DUF4113) SKTS_RS04145 PF00817 impB/mucB/samB family SKTS_RS04150 PF00717 Peptidase S24-like SKTS_RS04155 PF00717 Peptidase S24-like SKTS_RS04155 PF01726 LexA DNA binding domain SKTS_RS04160 PF01207 Dihydrouridine synthase (Dus) SKTS_RS04165 PF03190 Protein of unknown function, DUF255 SKTS_RS04185 PF02195 ParB-like nuclease domain SKTS_RS04185 PF17762 HTH domain found in ParB protein SKTS_RS04195 PF13091 PLD-like domain SKTS_RS04205 PF00391 PEP-utilising enzyme, mobile domain SKTS_RS04205 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SKTS_RS04225 PF07690 Major Facilitator Superfamily SKTS_RS04260 PF00202 Aminotransferase class-III SKTS_RS04265 PF00912 Transglycosylase SKTS_RS04290 PF01850 PIN domain SKTS_RS04305 PF13686 DsrE/DsrF/DrsH-like family SKTS_RS04310 PF01206 Sulfurtransferase TusA SKTS_RS04320 PF00563 EAL domain SKTS_RS04320 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS04320 PF01590 GAF domain SKTS_RS04320 PF00360 Phytochrome region SKTS_RS04345 PF13180 PDZ domain SKTS_RS04360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS04360 PF00672 HAMP domain SKTS_RS04360 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS04365 PF00072 Response regulator receiver domain SKTS_RS04365 PF00486 Transcriptional regulatory protein, C terminal SKTS_RS04385 PF01522 Polysaccharide deacetylase SKTS_RS04390 PF04344 Chemotaxis phosphatase, CheZ SKTS_RS04400 PF00571 CBS domain SKTS_RS04400 PF00478 IMP dehydrogenase / GMP reductase domain SKTS_RS04420 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS04420 PF00563 EAL domain SKTS_RS04420 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS04440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS04440 PF13426 PAS domain SKTS_RS04440 PF13188 PAS domain SKTS_RS04440 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS04440 PF00989 PAS fold SKTS_RS04450 PF00072 Response regulator receiver domain SKTS_RS04450 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS04455 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system SKTS_RS04470 PF13417 Glutathione S-transferase, N-terminal domain SKTS_RS04470 PF00043 Glutathione S-transferase, C-terminal domain SKTS_RS04485 PF00575 S1 RNA binding domain SKTS_RS04485 PF17674 HHH domain SKTS_RS04485 PF09371 Tex-like protein N-terminal domain SKTS_RS04485 PF16921 Tex protein YqgF-like domain SKTS_RS04490 PF14579 Helix-hairpin-helix motif SKTS_RS04490 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SKTS_RS04490 PF07733 Bacterial DNA polymerase III alpha NTPase domain SKTS_RS04490 PF11490 DNA polymerase III polC-type N-terminus II SKTS_RS04490 PF02811 PHP domain SKTS_RS04490 PF00929 Exonuclease SKTS_RS04505 PF07992 Pyridine nucleotide-disulphide oxidoreductase SKTS_RS04510 PF01012 Electron transfer flavoprotein domain SKTS_RS04510 PF00766 Electron transfer flavoprotein FAD-binding domain SKTS_RS04515 PF01012 Electron transfer flavoprotein domain SKTS_RS04520 PF03206 Nitrogen fixation protein NifW SKTS_RS04525 PF00682 HMGL-like SKTS_RS04535 PF08281 Sigma-70, region 4 SKTS_RS04535 PF04542 Sigma-70 region 2 SKTS_RS04545 PF00199 Catalase SKTS_RS04550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SKTS_RS04550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SKTS_RS04550 PF00205 Thiamine pyrophosphate enzyme, central domain SKTS_RS04575 PF01464 Transglycosylase SLT domain SKTS_RS04575 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain SKTS_RS04580 PF02705 K+ potassium transporter SKTS_RS04585 PF00578 AhpC/TSA family SKTS_RS04590 PF05981 CreA protein SKTS_RS04595 PF03459 TOBE domain SKTS_RS04595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SKTS_RS04605 PF00528 Binding-protein-dependent transport system inner membrane component SKTS_RS04610 PF00005 ABC transporter SKTS_RS04610 PF03459 TOBE domain SKTS_RS04620 PF00270 DEAD/DEAH box helicase SKTS_RS04620 PF00570 HRDC domain SKTS_RS04620 PF00271 Helicase conserved C-terminal domain SKTS_RS04620 PF09382 RQC domain SKTS_RS04620 PF16124 RecQ zinc-binding SKTS_RS04635 PF01218 Coproporphyrinogen III oxidase SKTS_RS04655 PF04542 Sigma-70 region 2 SKTS_RS04655 PF08281 Sigma-70, region 4 SKTS_RS04665 PF03976 Polyphosphate kinase 2 (PPK2) SKTS_RS04685 PF00005 ABC transporter SKTS_RS04685 PF12848 ABC transporter SKTS_RS04710 PF17284 Spermidine synthase tetramerisation domain SKTS_RS04715 PF07687 Peptidase dimerisation domain SKTS_RS04715 PF01546 Peptidase family M20/M25/M40 SKTS_RS04720 PF00072 Response regulator receiver domain SKTS_RS04720 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS04745 PF01926 50S ribosome-binding GTPase SKTS_RS04755 PF10634 Fe2+ transport protein SKTS_RS04765 PF13473 Cupredoxin-like domain SKTS_RS04785 PF00563 EAL domain SKTS_RS04785 PF08668 HDOD domain SKTS_RS04790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS04790 PF00204 DNA gyrase B SKTS_RS04790 PF01751 Toprim domain SKTS_RS04790 PF00986 DNA gyrase B subunit, carboxyl terminus SKTS_RS04795 PF00521 DNA gyrase/topoisomerase IV, subunit A SKTS_RS04800 PF04891 NifQ SKTS_RS04805 PF12838 4Fe-4S dicluster domain SKTS_RS04810 PF05082 Rop-like SKTS_RS04815 PF03270 Protein of unknown function, DUF269 SKTS_RS04820 PF02579 Dinitrogenase iron-molybdenum cofactor SKTS_RS04825 PF00148 Nitrogenase component 1 type Oxidoreductase SKTS_RS04830 PF04324 BFD-like [2Fe-2S] binding domain SKTS_RS04830 PF00148 Nitrogenase component 1 type Oxidoreductase SKTS_RS04850 PF00437 Type II/IV secretion system protein SKTS_RS04855 PF04397 LytTr DNA-binding domain SKTS_RS04855 PF00072 Response regulator receiver domain SKTS_RS04860 PF06580 Histidine kinase SKTS_RS04860 PF07694 5TMR of 5TMR-LYT SKTS_RS04875 PF02687 FtsX-like permease family SKTS_RS04875 PF12704 MacB-like periplasmic core domain SKTS_RS04880 PF00005 ABC transporter SKTS_RS04880 PF02687 FtsX-like permease family SKTS_RS04880 PF12704 MacB-like periplasmic core domain SKTS_RS04890 PF13180 PDZ domain SKTS_RS04910 PF00111 2Fe-2S iron-sulfur cluster binding domain SKTS_RS04915 PF00148 Nitrogenase component 1 type Oxidoreductase SKTS_RS04915 PF11844 Domain of unknown function (DUF3364) SKTS_RS04920 PF00148 Nitrogenase component 1 type Oxidoreductase SKTS_RS04925 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family SKTS_RS04930 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) SKTS_RS04940 PF03747 ADP-ribosylglycohydrolase SKTS_RS04950 PF08753 NikR C terminal nickel binding domain SKTS_RS04950 PF01402 Ribbon-helix-helix protein, copG family SKTS_RS04960 PF03824 High-affinity nickel-transport protein SKTS_RS04965 PF03960 ArsC family SKTS_RS04975 PF00072 Response regulator receiver domain SKTS_RS04975 PF17149 Periplasmic sensor domain found in signal transduction proteins SKTS_RS04975 PF00672 HAMP domain SKTS_RS04975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS04975 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS04975 PF01627 Hpt domain SKTS_RS04980 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS04980 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS04980 PF00563 EAL domain SKTS_RS04995 PF02203 Tar ligand binding domain homologue SKTS_RS04995 PF00672 HAMP domain SKTS_RS04995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SKTS_RS05000 PF01584 CheW-like domain SKTS_RS05015 PF06988 NifT/FixU protein SKTS_RS05030 PF04319 NifZ domain SKTS_RS05035 PF01816 Leucine rich repeat variant SKTS_RS05035 PF05484 LRV protein FeS4 cluster SKTS_RS05045 PF01521 Iron-sulphur cluster biosynthesis SKTS_RS05050 PF00037 4Fe-4S binding domain SKTS_RS05055 PF02579 Dinitrogenase iron-molybdenum cofactor SKTS_RS05055 PF04055 Radical SAM superfamily SKTS_RS05060 PF00672 HAMP domain SKTS_RS05060 PF02203 Tar ligand binding domain homologue SKTS_RS05060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SKTS_RS05070 PF02567 Phenazine biosynthesis-like protein SKTS_RS05080 PF01590 GAF domain SKTS_RS05080 PF00158 Sigma-54 interaction domain SKTS_RS05080 PF02954 Bacterial regulatory protein, Fis family SKTS_RS05085 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS05085 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS05085 PF00563 EAL domain SKTS_RS05090 PF08361 MAATS-type transcriptional repressor, C-terminal region SKTS_RS05090 PF00440 Bacterial regulatory proteins, tetR family SKTS_RS05095 PF00529 HlyD membrane-fusion protein of T1SS SKTS_RS05095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SKTS_RS05100 PF00873 AcrB/AcrD/AcrF family SKTS_RS05105 PF02321 Outer membrane efflux protein SKTS_RS05120 PF02253 Phospholipase A1 SKTS_RS05125 PF09997 Predicted membrane protein (DUF2238) SKTS_RS05130 PF07670 Nucleoside recognition SKTS_RS05135 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS05135 PF00563 EAL domain SKTS_RS05135 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS05140 PF01966 HD domain SKTS_RS05140 PF11871 Domain of unknown function (DUF3391) SKTS_RS05145 PF00689 Cation transporting ATPase, C-terminus SKTS_RS05145 PF00690 Cation transporter/ATPase, N-terminus SKTS_RS05150 PF00485 Phosphoribulokinase / Uridine kinase family SKTS_RS05155 PF00749 tRNA synthetases class I (E and Q), catalytic domain SKTS_RS05175 PF00171 Aldehyde dehydrogenase family SKTS_RS05180 PF00582 Universal stress protein family SKTS_RS05210 PF00571 CBS domain SKTS_RS05210 PF00478 IMP dehydrogenase / GMP reductase domain SKTS_RS05215 PF07702 UTRA domain SKTS_RS05215 PF00392 Bacterial regulatory proteins, gntR family SKTS_RS05220 PF03949 Malic enzyme, NAD binding domain SKTS_RS05220 PF00390 Malic enzyme, N-terminal domain SKTS_RS05230 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SKTS_RS05235 PF02910 Fumarate reductase flavoprotein C-term SKTS_RS05235 PF00890 FAD binding domain SKTS_RS05240 PF13085 2Fe-2S iron-sulfur cluster binding domain SKTS_RS05245 PF08274 PhnA Zinc-Ribbon SKTS_RS05245 PF03831 PhnA domain SKTS_RS05295 PF00589 Phage integrase family SKTS_RS05295 PF13495 Phage integrase, N-terminal SAM-like domain SKTS_RS05300 PF03937 Flavinator of succinate dehydrogenase SKTS_RS05305 PF00285 Citrate synthase, C-terminal domain SKTS_RS05310 PF02779 Transketolase, pyrimidine binding domain SKTS_RS05310 PF16870 2-oxoglutarate dehydrogenase C-terminal SKTS_RS05310 PF16078 2-oxoglutarate dehydrogenase N-terminus SKTS_RS05310 PF00676 Dehydrogenase E1 component SKTS_RS05315 PF00364 Biotin-requiring enzyme SKTS_RS05315 PF02817 e3 binding domain SKTS_RS05315 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SKTS_RS05320 PF03969 AFG1-like ATPase SKTS_RS05330 PF00563 EAL domain SKTS_RS05330 PF08668 HDOD domain SKTS_RS05335 PF02895 Signal transducing histidine kinase, homodimeric domain SKTS_RS05335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS05335 PF01584 CheW-like domain SKTS_RS05335 PF01627 Hpt domain SKTS_RS05335 PF00072 Response regulator receiver domain SKTS_RS05340 PF04344 Chemotaxis phosphatase, CheZ SKTS_RS05345 PF00072 Response regulator receiver domain SKTS_RS05350 PF00072 Response regulator receiver domain SKTS_RS05350 PF01584 CheW-like domain SKTS_RS05355 PF00072 Response regulator receiver domain SKTS_RS05355 PF01584 CheW-like domain SKTS_RS05360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SKTS_RS05360 PF17200 Single Cache domain 2 SKTS_RS05360 PF00672 HAMP domain SKTS_RS05365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS05365 PF00989 PAS fold SKTS_RS05365 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS05370 PF00158 Sigma-54 interaction domain SKTS_RS05370 PF00072 Response regulator receiver domain SKTS_RS05370 PF02954 Bacterial regulatory protein, Fis family SKTS_RS05375 PF02049 Flagellar hook-basal body complex protein FliE SKTS_RS05380 PF08345 Flagellar M-ring protein C-terminal SKTS_RS05380 PF01514 Secretory protein of YscJ/FliF family SKTS_RS05385 PF14842 FliG N-terminal domain SKTS_RS05385 PF14841 FliG middle domain SKTS_RS05385 PF01706 FliG C-terminal domain SKTS_RS05395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SKTS_RS05395 PF18269 T3SS EscN ATPase C-terminal domain SKTS_RS05415 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SKTS_RS05415 PF02154 Flagellar motor switch protein FliM SKTS_RS05420 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SKTS_RS05425 PF04347 Flagellar biosynthesis protein, FliO SKTS_RS05430 PF00813 FliP family SKTS_RS05435 PF01313 Bacterial export proteins, family 3 SKTS_RS05440 PF01311 Bacterial export proteins, family 1 SKTS_RS05445 PF03477 ATP cone domain SKTS_RS05445 PF02867 Ribonucleotide reductase, barrel domain SKTS_RS05445 PF00317 Ribonucleotide reductase, all-alpha domain SKTS_RS05450 PF00701 Dihydrodipicolinate synthetase family SKTS_RS05455 PF06804 NlpB/DapX lipoprotein SKTS_RS05460 PF16123 Hydroxyacylglutathione hydrolase C-terminus SKTS_RS05460 PF00753 Metallo-beta-lactamase superfamily SKTS_RS05475 PF08007 Cupin superfamily protein SKTS_RS05480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SKTS_RS05485 PF05190 MutS family domain IV SKTS_RS05485 PF00488 MutS domain V SKTS_RS05485 PF01624 MutS domain I SKTS_RS05485 PF05192 MutS domain III SKTS_RS05485 PF05188 MutS domain II SKTS_RS05490 PF01063 Amino-transferase class IV SKTS_RS05495 PF02618 YceG-like family SKTS_RS05500 PF02223 Thymidylate kinase SKTS_RS05505 PF09115 DNA polymerase III, delta subunit, C terminal SKTS_RS05515 PF01026 TatD related DNase SKTS_RS05520 PF12706 Beta-lactamase superfamily domain SKTS_RS05520 PF03099 Biotin/lipoate A/B protein ligase family SKTS_RS05530 PF00318 Ribosomal protein S2 SKTS_RS05535 PF00889 Elongation factor TS SKTS_RS05540 PF00696 Amino acid kinase family SKTS_RS05545 PF01765 Ribosome recycling factor SKTS_RS05550 PF01255 Putative undecaprenyl diphosphate synthase SKTS_RS05560 PF13288 DXP reductoisomerase C-terminal domain SKTS_RS05560 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SKTS_RS05560 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SKTS_RS05565 PF17820 PDZ domain SKTS_RS05565 PF02163 Peptidase family M50 SKTS_RS05570 PF07244 Surface antigen variable number repeat SKTS_RS05570 PF01103 Surface antigen SKTS_RS05580 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD SKTS_RS05580 PF00132 Bacterial transferase hexapeptide (six repeats) SKTS_RS05585 PF07977 FabA-like domain SKTS_RS05590 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SKTS_RS05590 PF00132 Bacterial transferase hexapeptide (six repeats) SKTS_RS05595 PF02684 Lipid-A-disaccharide synthetase SKTS_RS05600 PF01351 Ribonuclease HII SKTS_RS05620 PF03358 NADPH-dependent FMN reductase SKTS_RS05630 PF01618 MotA/TolQ/ExbB proton channel family SKTS_RS05635 PF13677 Membrane MotB of proton-channel complex MotA/MotB SKTS_RS05635 PF00691 OmpA family SKTS_RS05660 PF08032 RNA 2'-O ribose methyltransferase substrate binding SKTS_RS05660 PF00588 SpoU rRNA Methylase family SKTS_RS05665 PF00312 Ribosomal protein S15 SKTS_RS05670 PF01138 3' exoribonuclease family, domain 1 SKTS_RS05670 PF03725 3' exoribonuclease family, domain 2 SKTS_RS05670 PF00575 S1 RNA binding domain SKTS_RS05670 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SKTS_RS05670 PF00013 KH domain SKTS_RS05675 PF13426 PAS domain SKTS_RS05675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SKTS_RS05675 PF08447 PAS fold SKTS_RS05685 PF01189 16S rRNA methyltransferase RsmB/F SKTS_RS05685 PF01029 NusB family SKTS_RS05700 PF00551 Formyl transferase SKTS_RS05705 PF00586 AIR synthase related protein, N-terminal domain SKTS_RS05705 PF02769 AIR synthase related protein, C-terminal domain SKTS_RS05710 PF00308 Bacterial dnaA protein SKTS_RS05725 PF03449 Transcription elongation factor, N-terminal SKTS_RS05725 PF01272 Transcription elongation factor, GreA/GreB, C-term SKTS_RS05745 PF00005 ABC transporter SKTS_RS05745 PF00664 ABC transporter transmembrane region SKTS_RS05750 PF01966 HD domain SKTS_RS05755 PF00989 PAS fold SKTS_RS05755 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS05755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS05765 PF00378 Enoyl-CoA hydratase/isomerase SKTS_RS05785 PF01040 UbiA prenyltransferase family SKTS_RS05790 PF13378 Enolase C-terminal domain-like SKTS_RS05790 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SKTS_RS05800 PF00034 Cytochrome c SKTS_RS05805 PF01209 ubiE/COQ5 methyltransferase family SKTS_RS05810 PF00501 AMP-binding enzyme SKTS_RS05810 PF13193 AMP-binding enzyme C-terminal domain SKTS_RS05815 PF00425 chorismate binding enzyme SKTS_RS05820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SKTS_RS05820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SKTS_RS05830 PF00989 PAS fold SKTS_RS05830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS05830 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS05835 PF00072 Response regulator receiver domain SKTS_RS05845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS05845 PF00183 Hsp90 protein SKTS_RS05870 PF01882 Protein of unknown function DUF58 SKTS_RS05880 PF07726 ATPase family associated with various cellular activities (AAA) SKTS_RS05880 PF17863 AAA lid domain SKTS_RS05885 PF02508 Rnf-Nqr subunit, membrane protein SKTS_RS05890 PF02508 Rnf-Nqr subunit, membrane protein SKTS_RS05895 PF00690 Cation transporter/ATPase, N-terminus SKTS_RS05895 PF00689 Cation transporting ATPase, C-terminus SKTS_RS05900 PF01544 CorA-like Mg2+ transporter protein SKTS_RS05910 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS05910 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS05910 PF00563 EAL domain SKTS_RS05925 PF08676 MutL C terminal dimerisation domain SKTS_RS05925 PF01119 DNA mismatch repair protein, C-terminal domain SKTS_RS05935 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS05935 PF00672 HAMP domain SKTS_RS05935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS05940 PF00486 Transcriptional regulatory protein, C terminal SKTS_RS05940 PF00072 Response regulator receiver domain SKTS_RS05955 PF08448 PAS fold SKTS_RS05955 PF00563 EAL domain SKTS_RS05955 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS05970 PF02601 Exonuclease VII, large subunit SKTS_RS05970 PF13742 OB-fold nucleic acid binding domain SKTS_RS05975 PF01618 MotA/TolQ/ExbB proton channel family SKTS_RS05980 PF02472 Biopolymer transport protein ExbD/TolR SKTS_RS05985 PF02606 Tetraacyldisaccharide-1-P 4'-kinase SKTS_RS05990 PF03966 Trm112p-like protein SKTS_RS05995 PF02348 Cytidylyltransferase SKTS_RS06000 PF05191 Adenylate kinase, active site lid SKTS_RS06010 PF00365 Phosphofructokinase SKTS_RS06020 PF03030 Inorganic H+ pyrophosphatase SKTS_RS06025 PF00719 Inorganic pyrophosphatase SKTS_RS06035 PF07715 TonB-dependent Receptor Plug Domain SKTS_RS06035 PF00593 TonB dependent receptor SKTS_RS06040 PF01593 Flavin containing amine oxidoreductase SKTS_RS06050 PF13183 4Fe-4S dicluster domain SKTS_RS06050 PF13085 2Fe-2S iron-sulfur cluster binding domain SKTS_RS06055 PF02754 Cysteine-rich domain SKTS_RS06070 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SKTS_RS06070 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SKTS_RS06070 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SKTS_RS06070 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SKTS_RS06080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS06080 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS06085 PF00072 Response regulator receiver domain SKTS_RS06090 PF02954 Bacterial regulatory protein, Fis family SKTS_RS06090 PF00072 Response regulator receiver domain SKTS_RS06090 PF00158 Sigma-54 interaction domain SKTS_RS06095 PF00025 ADP-ribosylation factor family SKTS_RS06100 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS06100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS06105 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SKTS_RS06105 PF00437 Type II/IV secretion system protein SKTS_RS06110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS06110 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS06110 PF00072 Response regulator receiver domain SKTS_RS06110 PF13188 PAS domain SKTS_RS06110 PF08448 PAS fold SKTS_RS06115 PF01841 Transglutaminase-like superfamily SKTS_RS06115 PF13559 Domain of unknown function (DUF4129) SKTS_RS06115 PF11992 Domain of unknown function (DUF3488) SKTS_RS06125 PF07726 ATPase family associated with various cellular activities (AAA) SKTS_RS06125 PF17863 AAA lid domain SKTS_RS06145 PF00471 Ribosomal protein L33 SKTS_RS06150 PF00830 Ribosomal L28 family SKTS_RS06155 PF02525 Flavodoxin-like fold SKTS_RS06160 PF04002 RadC-like JAB domain SKTS_RS06165 PF02441 Flavoprotein SKTS_RS06165 PF04127 DNA / pantothenate metabolism flavoprotein SKTS_RS06170 PF00692 dUTPase SKTS_RS06175 PF11791 Aconitate B N-terminal domain SKTS_RS06175 PF06434 Aconitate hydratase 2 N-terminus SKTS_RS06175 PF00330 Aconitase family (aconitate hydratase) SKTS_RS06180 PF00043 Glutathione S-transferase, C-terminal domain SKTS_RS06180 PF13417 Glutathione S-transferase, N-terminal domain SKTS_RS06210 PF00664 ABC transporter transmembrane region SKTS_RS06210 PF00005 ABC transporter SKTS_RS06215 PF08245 Mur ligase middle domain SKTS_RS06215 PF08443 RimK-like ATP-grasp domain SKTS_RS06215 PF02875 Mur ligase family, glutamate ligase domain SKTS_RS06220 PF02875 Mur ligase family, glutamate ligase domain SKTS_RS06220 PF08443 RimK-like ATP-grasp domain SKTS_RS06220 PF08245 Mur ligase middle domain SKTS_RS06230 PF00849 RNA pseudouridylate synthase SKTS_RS06235 PF00180 Isocitrate/isopropylmalate dehydrogenase SKTS_RS06240 PF00313 'Cold-shock' DNA-binding domain SKTS_RS06245 PF02617 ATP-dependent Clp protease adaptor protein ClpS SKTS_RS06250 PF10431 C-terminal, D2-small domain, of ClpB protein SKTS_RS06250 PF00004 ATPase family associated with various cellular activities (AAA) SKTS_RS06250 PF07724 AAA domain (Cdc48 subfamily) SKTS_RS06250 PF17871 AAA lid domain SKTS_RS06250 PF02861 Clp amino terminal domain, pathogenicity island component SKTS_RS06260 PF01132 Elongation factor P (EF-P) OB domain SKTS_RS06260 PF09285 Elongation factor P, C-terminal SKTS_RS06260 PF08207 Elongation factor P (EF-P) KOW-like domain SKTS_RS06265 PF00069 Protein kinase domain SKTS_RS06265 PF03793 PASTA domain SKTS_RS06270 PF04055 Radical SAM superfamily SKTS_RS06270 PF06969 HemN C-terminal domain SKTS_RS06275 PF02623 FliW protein SKTS_RS06285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SKTS_RS06285 PF07498 Rho termination factor, N-terminal domain SKTS_RS06285 PF07497 Rho termination factor, RNA-binding domain SKTS_RS06290 PF00085 Thioredoxin SKTS_RS06305 PF00580 UvrD/REP helicase N-terminal domain SKTS_RS06305 PF13361 UvrD-like helicase C-terminal domain SKTS_RS06305 PF12705 PD-(D/E)XK nuclease superfamily SKTS_RS06310 PF00271 Helicase conserved C-terminal domain SKTS_RS06310 PF00270 DEAD/DEAH box helicase SKTS_RS06315 PF01066 CDP-alcohol phosphatidyltransferase SKTS_RS06320 PF02666 Phosphatidylserine decarboxylase SKTS_RS06325 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SKTS_RS06325 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SKTS_RS06330 PF10369 Small subunit of acetolactate synthase SKTS_RS06335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SKTS_RS06335 PF00205 Thiamine pyrophosphate enzyme, central domain SKTS_RS06335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SKTS_RS06365 PF03739 Lipopolysaccharide export system permease LptF/LptG SKTS_RS06370 PF00883 Cytosol aminopeptidase family, catalytic domain SKTS_RS06370 PF02789 Cytosol aminopeptidase family, N-terminal domain SKTS_RS06375 PF04364 DNA polymerase III chi subunit, HolC SKTS_RS06385 PF08264 Anticodon-binding domain of tRNA SKTS_RS06385 PF00133 tRNA synthetases class I (I, L, M and V) SKTS_RS06385 PF10458 Valyl tRNA synthetase tRNA binding arm SKTS_RS06400 PF01266 FAD dependent oxidoreductase SKTS_RS06410 PF05567 Neisseria PilC beta-propeller domain SKTS_RS06420 PF07963 Prokaryotic N-terminal methylation motif SKTS_RS06430 PF07963 Prokaryotic N-terminal methylation motif SKTS_RS06430 PF00114 Pilin (bacterial filament) SKTS_RS06435 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SKTS_RS06435 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SKTS_RS06435 PF01276 Orn/Lys/Arg decarboxylase, major domain SKTS_RS06440 PF06965 Na+/H+ antiporter 1 SKTS_RS06440 PF01343 Peptidase family S49 SKTS_RS06445 PF13419 Haloacid dehalogenase-like hydrolase SKTS_RS06450 PF00849 RNA pseudouridylate synthase SKTS_RS06450 PF01479 S4 domain SKTS_RS06455 PF12111 Polyribonucleotide phosphorylase C terminal SKTS_RS06455 PF10150 Ribonuclease E/G family SKTS_RS06455 PF00575 S1 RNA binding domain SKTS_RS06460 PF01938 TRAM domain SKTS_RS06460 PF05958 tRNA (Uracil-5-)-methyltransferase SKTS_RS06500 PF03695 Uncharacterised protein family (UPF0149) SKTS_RS06500 PF02810 SEC-C motif SKTS_RS06505 PF13673 Acetyltransferase (GNAT) domain SKTS_RS06560 PF00271 Helicase conserved C-terminal domain SKTS_RS06560 PF00176 SNF2 family N-terminal domain SKTS_RS06580 PF02609 Exonuclease VII small subunit SKTS_RS06585 PF00348 Polyprenyl synthetase SKTS_RS06590 PF02780 Transketolase, C-terminal domain SKTS_RS06590 PF02779 Transketolase, pyrimidine binding domain SKTS_RS06590 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SKTS_RS06595 PF02649 Type I GTP cyclohydrolase folE2 SKTS_RS06605 PF00117 Glutamine amidotransferase class-I SKTS_RS06605 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SKTS_RS06610 PF00330 Aconitase family (aconitate hydratase) SKTS_RS06620 PF00694 Aconitase C-terminal domain SKTS_RS06625 PF00180 Isocitrate/isopropylmalate dehydrogenase SKTS_RS06630 PF02774 Semialdehyde dehydrogenase, dimerisation domain SKTS_RS06630 PF01118 Semialdehyde dehydrogenase, NAD binding domain SKTS_RS06645 PF01416 tRNA pseudouridine synthase SKTS_RS06650 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SKTS_RS06655 PF00291 Pyridoxal-phosphate dependent enzyme SKTS_RS06660 PF00290 Tryptophan synthase alpha chain SKTS_RS06665 PF17848 Acetyl-coA carboxylase zinc finger domain SKTS_RS06665 PF01039 Carboxyl transferase domain SKTS_RS06670 PF02875 Mur ligase family, glutamate ligase domain SKTS_RS06670 PF08245 Mur ligase middle domain SKTS_RS06680 PF02674 Colicin V production protein SKTS_RS06685 PF00156 Phosphoribosyl transferase domain SKTS_RS06690 PF01053 Cys/Met metabolism PLP-dependent enzyme SKTS_RS06695 PF12849 PBP superfamily domain SKTS_RS06700 PF00672 HAMP domain SKTS_RS06700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SKTS_RS06700 PF12729 Four helix bundle sensory module for signal transduction SKTS_RS06705 PF00365 Phosphofructokinase SKTS_RS06760 PF13693 Winged helix-turn-helix DNA-binding SKTS_RS06850 PF06074 Protein of unknown function (DUF935) SKTS_RS06870 PF10124 Mu-like prophage major head subunit gpT SKTS_RS06900 PF17482 Phage tail sheath C-terminal domain SKTS_RS06900 PF04984 Phage tail sheath protein subtilisin-like domain SKTS_RS06930 PF06890 Bacteriophage Mu Gp45 protein SKTS_RS06940 PF04865 Baseplate J-like protein SKTS_RS06965 PF02086 D12 class N6 adenine-specific DNA methyltransferase SKTS_RS06970 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system SKTS_RS06975 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SKTS_RS06990 PF01430 Hsp33 protein SKTS_RS06995 PF01479 S4 domain SKTS_RS07005 PF00873 AcrB/AcrD/AcrF family SKTS_RS07025 PF04264 YceI-like domain SKTS_RS07035 PF01292 Prokaryotic cytochrome b561 SKTS_RS07050 PF04358 DsrC like protein SKTS_RS07070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SKTS_RS07070 PF00529 HlyD membrane-fusion protein of T1SS SKTS_RS07075 PF07690 Major Facilitator Superfamily SKTS_RS07110 PF00873 AcrB/AcrD/AcrF family SKTS_RS07115 PF13533 Biotin-lipoyl like SKTS_RS07125 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS07125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS07125 PF00672 HAMP domain SKTS_RS07130 PF00486 Transcriptional regulatory protein, C terminal SKTS_RS07130 PF00072 Response regulator receiver domain SKTS_RS07140 PF13188 PAS domain SKTS_RS07140 PF00989 PAS fold SKTS_RS07140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS07140 PF13426 PAS domain SKTS_RS07140 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS07145 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS07145 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS07145 PF00563 EAL domain SKTS_RS07160 PF00211 Adenylate and Guanylate cyclase catalytic domain SKTS_RS07165 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SKTS_RS07165 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SKTS_RS07170 PF02885 Glycosyl transferase family, helical bundle domain SKTS_RS07170 PF00591 Glycosyl transferase family, a/b domain SKTS_RS07185 PF08241 Methyltransferase domain SKTS_RS07190 PF08502 LeuA allosteric (dimerisation) domain SKTS_RS07190 PF00682 HMGL-like SKTS_RS07195 PF01037 Lrp/AsnC ligand binding domain SKTS_RS07200 PF07992 Pyridine nucleotide-disulphide oxidoreductase SKTS_RS07200 PF18113 Rubredoxin binding C-terminal domain SKTS_RS07205 PF00301 Rubredoxin SKTS_RS07215 PF03466 LysR substrate binding domain SKTS_RS07215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SKTS_RS07235 PF09335 SNARE associated Golgi protein SKTS_RS07240 PF07715 TonB-dependent Receptor Plug Domain SKTS_RS07240 PF00593 TonB dependent receptor SKTS_RS07245 PF07549 SecD/SecF GG Motif SKTS_RS07245 PF02355 Protein export membrane protein SKTS_RS07250 PF02355 Protein export membrane protein SKTS_RS07250 PF07549 SecD/SecF GG Motif SKTS_RS07250 PF13721 SecD export protein N-terminal TM region SKTS_RS07255 PF02699 Preprotein translocase subunit SKTS_RS07260 PF01702 Queuine tRNA-ribosyltransferase SKTS_RS07265 PF02547 Queuosine biosynthesis protein SKTS_RS07280 PF00483 Nucleotidyl transferase SKTS_RS07280 PF01050 Mannose-6-phosphate isomerase SKTS_RS07310 PF01370 NAD dependent epimerase/dehydratase family SKTS_RS07315 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SKTS_RS07315 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SKTS_RS07315 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SKTS_RS07325 PF02397 Bacterial sugar transferase SKTS_RS07330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS07330 PF01627 Hpt domain SKTS_RS07330 PF02895 Signal transducing histidine kinase, homodimeric domain SKTS_RS07330 PF01584 CheW-like domain SKTS_RS07335 PF00158 Sigma-54 interaction domain SKTS_RS07335 PF00072 Response regulator receiver domain SKTS_RS07335 PF02954 Bacterial regulatory protein, Fis family SKTS_RS07340 PF13537 Glutamine amidotransferase domain SKTS_RS07340 PF00733 Asparagine synthase SKTS_RS07380 PF16363 GDP-mannose 4,6 dehydratase SKTS_RS07385 PF01522 Polysaccharide deacetylase SKTS_RS07400 PF02875 Mur ligase family, glutamate ligase domain SKTS_RS07400 PF01225 Mur ligase family, catalytic domain SKTS_RS07400 PF08245 Mur ligase middle domain SKTS_RS07405 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SKTS_RS07405 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SKTS_RS07410 PF13193 AMP-binding enzyme C-terminal domain SKTS_RS07410 PF00501 AMP-binding enzyme SKTS_RS07465 PF04230 Polysaccharide pyruvyl transferase SKTS_RS07470 PF00535 Glycosyl transferase family 2 SKTS_RS07485 PF00534 Glycosyl transferases group 1 SKTS_RS07485 PF13439 Glycosyltransferase Family 4 SKTS_RS07490 PF00534 Glycosyl transferases group 1 SKTS_RS07490 PF13439 Glycosyltransferase Family 4 SKTS_RS07495 PF00733 Asparagine synthase SKTS_RS07495 PF13537 Glutamine amidotransferase domain SKTS_RS07500 PF13439 Glycosyltransferase Family 4 SKTS_RS07500 PF00534 Glycosyl transferases group 1 SKTS_RS07520 PF01522 Polysaccharide deacetylase SKTS_RS07525 PF02350 UDP-N-acetylglucosamine 2-epimerase SKTS_RS07530 PF13401 AAA domain SKTS_RS07530 PF01471 Putative peptidoglycan binding domain SKTS_RS07540 PF13614 AAA domain SKTS_RS07550 PF02563 Polysaccharide biosynthesis/export protein SKTS_RS07550 PF10531 SLBB domain SKTS_RS07560 PF02261 Aspartate decarboxylase SKTS_RS07565 PF01522 Polysaccharide deacetylase SKTS_RS07570 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS07570 PF00563 EAL domain SKTS_RS07570 PF00563 EAL domain SKTS_RS07570 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS07570 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS07570 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS07580 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system SKTS_RS07585 PF00145 C-5 cytosine-specific DNA methylase SKTS_RS07585 PF01381 Helix-turn-helix SKTS_RS07590 PF02310 B12 binding domain SKTS_RS07590 PF04055 Radical SAM superfamily SKTS_RS07600 PF01553 Acyltransferase SKTS_RS07600 PF00501 AMP-binding enzyme SKTS_RS07605 PF00782 Dual specificity phosphatase, catalytic domain SKTS_RS07635 PF02801 Beta-ketoacyl synthase, C-terminal domain SKTS_RS07635 PF00109 Beta-ketoacyl synthase, N-terminal domain SKTS_RS07670 PF11892 Domain of unknown function (DUF3412) SKTS_RS07670 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases SKTS_RS07670 PF03641 Possible lysine decarboxylase SKTS_RS07680 PF00664 ABC transporter transmembrane region SKTS_RS07680 PF00005 ABC transporter SKTS_RS07685 PF01467 Cytidylyltransferase-like SKTS_RS07685 PF00293 NUDIX domain SKTS_RS07690 PF00795 Carbon-nitrogen hydrolase SKTS_RS07690 PF02540 NAD synthase SKTS_RS07695 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SKTS_RS07695 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SKTS_RS07705 PF00293 NUDIX domain SKTS_RS07705 PF01467 Cytidylyltransferase-like SKTS_RS07725 PF07977 FabA-like domain SKTS_RS07730 PF00501 AMP-binding enzyme SKTS_RS07740 PF00550 Phosphopantetheine attachment site SKTS_RS07745 PF04820 Tryptophan halogenase SKTS_RS07750 PF00999 Sodium/hydrogen exchanger family SKTS_RS07765 PF02569 Pantoate-beta-alanine ligase SKTS_RS07770 PF02548 Ketopantoate hydroxymethyltransferase SKTS_RS07780 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SKTS_RS07785 PF01743 Poly A polymerase head domain SKTS_RS07785 PF12626 Polymerase A arginine-rich C-terminus SKTS_RS07785 PF12627 Probable RNA and SrmB- binding site of polymerase A SKTS_RS07790 PF08448 PAS fold SKTS_RS07790 PF08447 PAS fold SKTS_RS07790 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS07790 PF00563 EAL domain SKTS_RS07795 PF00005 ABC transporter SKTS_RS07800 PF01032 FecCD transport family SKTS_RS07820 PF02472 Biopolymer transport protein ExbD/TolR SKTS_RS07825 PF01618 MotA/TolQ/ExbB proton channel family SKTS_RS07830 PF02687 FtsX-like permease family SKTS_RS07830 PF00005 ABC transporter SKTS_RS07830 PF12704 MacB-like periplasmic core domain SKTS_RS07835 PF12704 MacB-like periplasmic core domain SKTS_RS07835 PF02687 FtsX-like permease family SKTS_RS07835 PF00005 ABC transporter SKTS_RS07840 PF00529 HlyD membrane-fusion protein of T1SS SKTS_RS07840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SKTS_RS07845 PF02321 Outer membrane efflux protein SKTS_RS07850 PF07813 LTXXQ motif family protein SKTS_RS07860 PF00486 Transcriptional regulatory protein, C terminal SKTS_RS07860 PF00072 Response regulator receiver domain SKTS_RS07865 PF16527 Two-component sensor protein CpxA, periplasmic domain SKTS_RS07865 PF00672 HAMP domain SKTS_RS07865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS07865 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS07870 PF00975 Thioesterase domain SKTS_RS07870 PF00550 Phosphopantetheine attachment site SKTS_RS07870 PF00668 Condensation domain SKTS_RS07870 PF13193 AMP-binding enzyme C-terminal domain SKTS_RS07870 PF00501 AMP-binding enzyme SKTS_RS07880 PF00892 EamA-like transporter family SKTS_RS07885 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SKTS_RS07885 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SKTS_RS07890 PF00578 AhpC/TSA family SKTS_RS07900 PF02861 Clp amino terminal domain, pathogenicity island component SKTS_RS07900 PF07724 AAA domain (Cdc48 subfamily) SKTS_RS07900 PF10431 C-terminal, D2-small domain, of ClpB protein SKTS_RS07900 PF00004 ATPase family associated with various cellular activities (AAA) SKTS_RS07900 PF17871 AAA lid domain SKTS_RS07910 PF00072 Response regulator receiver domain SKTS_RS07915 PF01894 Uncharacterised protein family UPF0047 SKTS_RS07920 PF00578 AhpC/TSA family SKTS_RS07930 PF01292 Prokaryotic cytochrome b561 SKTS_RS07955 PF13460 NAD(P)H-binding SKTS_RS07955 PF11066 Protein of unknown function (DUF2867) SKTS_RS07965 PF00459 Inositol monophosphatase family SKTS_RS07970 PF00588 SpoU rRNA Methylase family SKTS_RS07975 PF00132 Bacterial transferase hexapeptide (six repeats) SKTS_RS07980 PF02082 Transcriptional regulator SKTS_RS07985 PF00266 Aminotransferase class-V SKTS_RS07990 PF00266 Aminotransferase class-V SKTS_RS07995 PF01592 NifU-like N terminal domain SKTS_RS08000 PF01521 Iron-sulphur cluster biosynthesis SKTS_RS08005 PF07743 HSCB C-terminal oligomerisation domain SKTS_RS08010 PF00012 Hsp70 protein SKTS_RS08015 PF00111 2Fe-2S iron-sulfur cluster binding domain SKTS_RS08020 PF04384 Iron-sulphur cluster assembly SKTS_RS08025 PF01312 FlhB HrpN YscU SpaS Family SKTS_RS08030 PF00771 FHIPEP family SKTS_RS08035 PF00448 SRP54-type protein, GTPase domain SKTS_RS08040 PF10609 NUBPL iron-transfer P-loop NTPase SKTS_RS08045 PF04545 Sigma-70, region 4 SKTS_RS08045 PF04542 Sigma-70 region 2 SKTS_RS08045 PF04539 Sigma-70 region 3 SKTS_RS08050 PF01618 MotA/TolQ/ExbB proton channel family SKTS_RS08055 PF13677 Membrane MotB of proton-channel complex MotA/MotB SKTS_RS08055 PF00691 OmpA family SKTS_RS08075 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS08075 PF00072 Response regulator receiver domain SKTS_RS08080 PF00460 Flagella basal body rod protein SKTS_RS08085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SKTS_RS08085 PF00460 Flagella basal body rod protein SKTS_RS08090 PF03963 Flagellar hook capping protein - N-terminal region SKTS_RS08090 PF13860 FlgD Ig-like domain SKTS_RS08090 PF13861 FlgD Tudor-like domain SKTS_RS08095 PF07559 Flagellar basal body protein FlaE SKTS_RS08095 PF00460 Flagella basal body rod protein SKTS_RS08095 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SKTS_RS08100 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SKTS_RS08100 PF00460 Flagella basal body rod protein SKTS_RS08105 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SKTS_RS08105 PF00460 Flagella basal body rod protein SKTS_RS08110 PF02107 Flagellar L-ring protein SKTS_RS08115 PF02119 Flagellar P-ring protein SKTS_RS08120 PF10135 Rod binding protein SKTS_RS08120 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SKTS_RS08125 PF00460 Flagella basal body rod protein SKTS_RS08125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SKTS_RS08130 PF00669 Bacterial flagellin N-terminal helical region SKTS_RS08140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SKTS_RS08145 PF00528 Binding-protein-dependent transport system inner membrane component SKTS_RS08150 PF12911 N-terminal TM domain of oligopeptide transport permease C SKTS_RS08150 PF00528 Binding-protein-dependent transport system inner membrane component SKTS_RS08155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SKTS_RS08155 PF00005 ABC transporter SKTS_RS08160 PF01476 LysM domain SKTS_RS08160 PF01464 Transglycosylase SLT domain SKTS_RS08170 PF16123 Hydroxyacylglutathione hydrolase C-terminus SKTS_RS08170 PF00753 Metallo-beta-lactamase superfamily SKTS_RS08175 PF08241 Methyltransferase domain SKTS_RS08180 PF00075 RNase H SKTS_RS08185 PF00929 Exonuclease SKTS_RS08195 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS08195 PF00563 EAL domain SKTS_RS08195 PF08448 PAS fold SKTS_RS08200 PF02421 Ferrous iron transport protein B SKTS_RS08200 PF07664 Ferrous iron transport protein B C terminus SKTS_RS08200 PF07670 Nucleoside recognition SKTS_RS08210 PF00117 Glutamine amidotransferase class-I SKTS_RS08210 PF06418 CTP synthase N-terminus SKTS_RS08215 PF00793 DAHP synthetase I family SKTS_RS08220 PF03952 Enolase, N-terminal domain SKTS_RS08220 PF00113 Enolase, C-terminal TIM barrel domain SKTS_RS08225 PF04977 Septum formation initiator SKTS_RS08230 PF02810 SEC-C motif SKTS_RS08235 PF00085 Thioredoxin SKTS_RS08240 PF00313 'Cold-shock' DNA-binding domain SKTS_RS08245 PF00923 Transaldolase/Fructose-6-phosphate aldolase SKTS_RS08250 PF00563 EAL domain SKTS_RS08250 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS08250 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS08280 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SKTS_RS08285 PF01799 [2Fe-2S] binding domain SKTS_RS08285 PF00111 2Fe-2S iron-sulfur cluster binding domain SKTS_RS08325 PF01471 Putative peptidoglycan binding domain SKTS_RS08325 PF13401 AAA domain SKTS_RS08335 PF08274 PhnA Zinc-Ribbon SKTS_RS08335 PF03831 PhnA domain SKTS_RS08340 PF09308 LuxQ, periplasmic SKTS_RS08340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS08340 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS08340 PF00072 Response regulator receiver domain SKTS_RS08345 PF00593 TonB dependent receptor SKTS_RS08345 PF07715 TonB-dependent Receptor Plug Domain SKTS_RS08360 PF00005 ABC transporter SKTS_RS08365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SKTS_RS08380 PF01479 S4 domain SKTS_RS08380 PF00849 RNA pseudouridylate synthase SKTS_RS08385 PF09905 DNA-binding protein VF530 SKTS_RS08395 PF07992 Pyridine nucleotide-disulphide oxidoreductase SKTS_RS08400 PF01863 Protein of unknown function DUF45 SKTS_RS08415 PF03880 DbpA RNA binding domain SKTS_RS08415 PF00270 DEAD/DEAH box helicase SKTS_RS08415 PF00271 Helicase conserved C-terminal domain SKTS_RS08430 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SKTS_RS08430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SKTS_RS08435 PF01850 PIN domain SKTS_RS08440 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin SKTS_RS08445 PF01738 Dienelactone hydrolase family SKTS_RS08450 PF11940 Domain of unknown function (DUF3458) Ig-like fold SKTS_RS08450 PF17432 Domain of unknown function (DUF3458_C) ARM repeats SKTS_RS08450 PF01433 Peptidase family M1 domain SKTS_RS08475 PF08482 ATP-dependent helicase C-terminal SKTS_RS08475 PF00271 Helicase conserved C-terminal domain SKTS_RS08475 PF04408 Helicase associated domain (HA2) SKTS_RS08475 PF00270 DEAD/DEAH box helicase SKTS_RS08485 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS08485 PF08448 PAS fold SKTS_RS08485 PF00072 Response regulator receiver domain SKTS_RS08485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS08485 PF13188 PAS domain SKTS_RS08505 PF05362 Lon protease (S16) C-terminal proteolytic domain SKTS_RS08505 PF13654 AAA domain SKTS_RS08515 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SKTS_RS08520 PF13614 AAA domain SKTS_RS08525 PF00563 EAL domain SKTS_RS08525 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS08525 PF08448 PAS fold SKTS_RS08530 PF01544 CorA-like Mg2+ transporter protein SKTS_RS08535 PF02685 Glucokinase SKTS_RS08555 PF04358 DsrC like protein SKTS_RS08565 PF10417 C-terminal domain of 1-Cys peroxiredoxin SKTS_RS08565 PF00578 AhpC/TSA family SKTS_RS08570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS08570 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS08580 PF00593 TonB dependent receptor SKTS_RS08580 PF07715 TonB-dependent Receptor Plug Domain SKTS_RS08585 PF00563 EAL domain SKTS_RS08585 PF08448 PAS fold SKTS_RS08585 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS08590 PF00072 Response regulator receiver domain SKTS_RS08610 PF00205 Thiamine pyrophosphate enzyme, central domain SKTS_RS08610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SKTS_RS08610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SKTS_RS08620 PF00343 Carbohydrate phosphorylase SKTS_RS08625 PF02600 Disulfide bond formation protein DsbB SKTS_RS08635 PF01479 S4 domain SKTS_RS08635 PF00849 RNA pseudouridylate synthase SKTS_RS08640 PF03205 Molybdopterin guanine dinucleotide synthesis protein B SKTS_RS08645 PF03453 MoeA N-terminal region (domain I and II) SKTS_RS08645 PF00994 Probable molybdopterin binding domain SKTS_RS08645 PF03454 MoeA C-terminal region (domain IV) SKTS_RS08650 PF02597 ThiS family SKTS_RS08655 PF02391 MoaE protein SKTS_RS08660 PF01545 Cation efflux family SKTS_RS08665 PF00989 PAS fold SKTS_RS08665 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS08665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS08670 PF00072 Response regulator receiver domain SKTS_RS08675 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS08680 PF00072 Response regulator receiver domain SKTS_RS08685 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS08685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS08685 PF00989 PAS fold SKTS_RS08695 PF01590 GAF domain SKTS_RS08695 PF00360 Phytochrome region SKTS_RS08695 PF08446 PAS fold SKTS_RS08695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS08695 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS08700 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS08700 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS08700 PF00563 EAL domain SKTS_RS08705 PF00563 EAL domain SKTS_RS08705 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS08705 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS08710 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS08710 PF08448 PAS fold SKTS_RS08720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS08720 PF08446 PAS fold SKTS_RS08720 PF01590 GAF domain SKTS_RS08720 PF00360 Phytochrome region SKTS_RS08720 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS08725 PF00072 Response regulator receiver domain SKTS_RS08730 PF00563 EAL domain SKTS_RS08730 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS08730 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS08735 PF01022 Bacterial regulatory protein, arsR family SKTS_RS08745 PF01758 Sodium Bile acid symporter family SKTS_RS08765 PF13847 Methyltransferase domain SKTS_RS08785 PF01451 Low molecular weight phosphotyrosine protein phosphatase SKTS_RS08795 PF07690 Major Facilitator Superfamily SKTS_RS08800 PF00113 Enolase, C-terminal TIM barrel domain SKTS_RS08800 PF03952 Enolase, N-terminal domain SKTS_RS08805 PF00027 Cyclic nucleotide-binding domain SKTS_RS08805 PF13545 Crp-like helix-turn-helix domain SKTS_RS08835 PF01925 Sulfite exporter TauE/SafE SKTS_RS08840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS08840 PF00672 HAMP domain SKTS_RS08840 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS08845 PF00486 Transcriptional regulatory protein, C terminal SKTS_RS08845 PF00072 Response regulator receiver domain SKTS_RS08855 PF02321 Outer membrane efflux protein SKTS_RS08865 PF13533 Biotin-lipoyl like SKTS_RS08875 PF12704 MacB-like periplasmic core domain SKTS_RS08875 PF00005 ABC transporter SKTS_RS08875 PF02687 FtsX-like permease family SKTS_RS08900 PF00282 Pyridoxal-dependent decarboxylase conserved domain SKTS_RS08910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SKTS_RS08925 PF01594 AI-2E family transporter SKTS_RS08930 PF07152 YaeQ protein SKTS_RS08935 PF00916 Sulfate permease family SKTS_RS08935 PF01740 STAS domain SKTS_RS08940 PF08448 PAS fold SKTS_RS08940 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS08950 PF00072 Response regulator receiver domain SKTS_RS08950 PF00486 Transcriptional regulatory protein, C terminal SKTS_RS08955 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS08955 PF08521 Two-component sensor kinase N-terminal SKTS_RS08955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS08960 PF13180 PDZ domain SKTS_RS08975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SKTS_RS08975 PF00306 ATP synthase alpha/beta chain, C terminal domain SKTS_RS08980 PF00430 ATP synthase B/B' CF(0) SKTS_RS08980 PF00213 ATP synthase delta (OSCP) subunit SKTS_RS08985 PF00137 ATP synthase subunit C SKTS_RS08990 PF00119 ATP synthase A chain SKTS_RS09005 PF02874 ATP synthase alpha/beta family, beta-barrel domain SKTS_RS09005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SKTS_RS09010 PF01435 Peptidase family M48 SKTS_RS09025 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS09025 PF00989 PAS fold SKTS_RS09025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS09030 PF03006 Haemolysin-III related SKTS_RS09035 PF01914 MarC family integral membrane protein SKTS_RS09045 PF00155 Aminotransferase class I and II SKTS_RS09050 PF04851 Type III restriction enzyme, res subunit SKTS_RS09050 PF00271 Helicase conserved C-terminal domain SKTS_RS09050 PF12344 Ultra-violet resistance protein B SKTS_RS09050 PF02151 UvrB/uvrC motif SKTS_RS09050 PF17757 UvrB interaction domain SKTS_RS09065 PF00919 Uncharacterized protein family UPF0004 SKTS_RS09065 PF04055 Radical SAM superfamily SKTS_RS09065 PF18693 TRAM domain SKTS_RS09080 PF01966 HD domain SKTS_RS09085 PF00437 Type II/IV secretion system protein SKTS_RS09085 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SKTS_RS09090 PF02112 cAMP phosphodiesterases class-II SKTS_RS09095 PF01435 Peptidase family M48 SKTS_RS09095 PF07720 Tetratricopeptide repeat SKTS_RS09105 PF00211 Adenylate and Guanylate cyclase catalytic domain SKTS_RS09110 PF01063 Amino-transferase class IV SKTS_RS09120 PF01522 Polysaccharide deacetylase SKTS_RS09125 PF00578 AhpC/TSA family SKTS_RS09130 PF13419 Haloacid dehalogenase-like hydrolase SKTS_RS09135 PF01258 Prokaryotic dksA/traR C4-type zinc finger SKTS_RS09145 PF02508 Rnf-Nqr subunit, membrane protein SKTS_RS09150 PF04060 Putative Fe-S cluster SKTS_RS09155 PF13375 RnfC Barrel sandwich hybrid domain SKTS_RS09155 PF10531 SLBB domain SKTS_RS09155 PF12838 4Fe-4S dicluster domain SKTS_RS09155 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SKTS_RS09160 PF03116 NQR2, RnfD, RnfE family SKTS_RS09165 PF04205 FMN-binding domain SKTS_RS09170 PF02508 Rnf-Nqr subunit, membrane protein SKTS_RS09175 PF00633 Helix-hairpin-helix motif SKTS_RS09175 PF10576 Iron-sulfur binding domain of endonuclease III SKTS_RS09175 PF00730 HhH-GPD superfamily base excision DNA repair protein SKTS_RS09195 PF00669 Bacterial flagellin N-terminal helical region SKTS_RS09195 PF00700 Bacterial flagellin C-terminal helical region SKTS_RS09250 PF02779 Transketolase, pyrimidine binding domain SKTS_RS09250 PF02780 Transketolase, C-terminal domain SKTS_RS09255 PF00676 Dehydrogenase E1 component SKTS_RS09265 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SKTS_RS09280 PF00700 Bacterial flagellin C-terminal helical region SKTS_RS09280 PF00669 Bacterial flagellin N-terminal helical region SKTS_RS09290 PF07195 Flagellar hook-associated protein 2 C-terminus SKTS_RS09290 PF02465 Flagellar hook-associated protein 2 N-terminus SKTS_RS09310 PF02646 RmuC family SKTS_RS09315 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SKTS_RS09315 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SKTS_RS09320 PF01180 Dihydroorotate dehydrogenase SKTS_RS09330 PF00909 Ammonium Transporter Family SKTS_RS09335 PF00106 short chain dehydrogenase SKTS_RS09350 PF00069 Protein kinase domain SKTS_RS09350 PF03793 PASTA domain SKTS_RS09365 PF16697 Inner membrane component of T3SS, cytoplasmic domain SKTS_RS09375 PF18073 Rubredoxin metal binding domain SKTS_RS09380 PF01168 Alanine racemase, N-terminal domain SKTS_RS09380 PF00842 Alanine racemase, C-terminal domain SKTS_RS09385 PF03796 DnaB-like helicase C terminal domain SKTS_RS09385 PF00772 DnaB-like helicase N terminal domain SKTS_RS09390 PF01281 Ribosomal protein L9, N-terminal domain SKTS_RS09390 PF03948 Ribosomal protein L9, C-terminal domain SKTS_RS09395 PF01084 Ribosomal protein S18 SKTS_RS09405 PF01250 Ribosomal protein S6 SKTS_RS09410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SKTS_RS09410 PF05698 Bacterial trigger factor protein (TF) C-terminus SKTS_RS09410 PF05697 Bacterial trigger factor protein (TF) SKTS_RS09415 PF00574 Clp protease SKTS_RS09420 PF07724 AAA domain (Cdc48 subfamily) SKTS_RS09420 PF10431 C-terminal, D2-small domain, of ClpB protein SKTS_RS09420 PF06689 ClpX C4-type zinc finger SKTS_RS09425 PF02190 ATP-dependent protease La (LON) substrate-binding domain SKTS_RS09425 PF00004 ATPase family associated with various cellular activities (AAA) SKTS_RS09425 PF05362 Lon protease (S16) C-terminal proteolytic domain SKTS_RS09430 PF00216 Bacterial DNA-binding protein SKTS_RS09445 PF05698 Bacterial trigger factor protein (TF) C-terminus SKTS_RS09455 PF00271 Helicase conserved C-terminal domain SKTS_RS09455 PF03461 TRCF domain SKTS_RS09455 PF17757 UvrB interaction domain SKTS_RS09455 PF02559 CarD-like/TRCF domain SKTS_RS09455 PF00270 DEAD/DEAH box helicase SKTS_RS09465 PF01571 Aminomethyltransferase folate-binding domain SKTS_RS09470 PF00890 FAD binding domain SKTS_RS09470 PF02910 Fumarate reductase flavoprotein C-term SKTS_RS09475 PF04542 Sigma-70 region 2 SKTS_RS09475 PF08281 Sigma-70, region 4 SKTS_RS09495 PF13180 PDZ domain SKTS_RS09500 PF00690 Cation transporter/ATPase, N-terminus SKTS_RS09500 PF00689 Cation transporting ATPase, C-terminus SKTS_RS09505 PF03193 RsgA GTPase SKTS_RS09515 PF01435 Peptidase family M48 SKTS_RS09520 PF00929 Exonuclease SKTS_RS09525 PF00343 Carbohydrate phosphorylase SKTS_RS09525 PF11897 Protein of unknown function (DUF3417) SKTS_RS09540 PF08323 Starch synthase catalytic domain SKTS_RS09540 PF00534 Glycosyl transferases group 1 SKTS_RS09550 PF02954 Bacterial regulatory protein, Fis family SKTS_RS09550 PF00158 Sigma-54 interaction domain SKTS_RS09550 PF00072 Response regulator receiver domain SKTS_RS09555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SKTS_RS09555 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SKTS_RS09560 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SKTS_RS09560 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SKTS_RS09585 PF00027 Cyclic nucleotide-binding domain SKTS_RS09585 PF07885 Ion channel SKTS_RS09590 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SKTS_RS09605 PF08442 ATP-grasp domain SKTS_RS09605 PF00549 CoA-ligase SKTS_RS09610 PF02629 CoA binding domain SKTS_RS09610 PF00549 CoA-ligase SKTS_RS09640 PF02565 Recombination protein O C terminal SKTS_RS09640 PF11967 Recombination protein O N terminal SKTS_RS09645 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ SKTS_RS09650 PF01648 4'-phosphopantetheinyl transferase superfamily SKTS_RS09655 PF00933 Glycosyl hydrolase family 3 N terminal domain SKTS_RS09660 PF03167 Uracil DNA glycosylase superfamily SKTS_RS09665 PF01361 Tautomerase enzyme SKTS_RS09670 PF02151 UvrB/uvrC motif SKTS_RS09670 PF08459 UvrC Helix-hairpin-helix N-terminal SKTS_RS09670 PF01541 GIY-YIG catalytic domain SKTS_RS09675 PF01066 CDP-alcohol phosphatidyltransferase SKTS_RS09705 PF00145 C-5 cytosine-specific DNA methylase SKTS_RS09785 PF01555 DNA methylase SKTS_RS09875 PF01464 Transglycosylase SLT domain SKTS_RS09875 PF01551 Peptidase family M23 SKTS_RS09875 PF10145 Phage-related minor tail protein SKTS_RS09940 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) SKTS_RS09950 PF03264 NapC/NirT cytochrome c family, N-terminal region SKTS_RS09955 PF00005 ABC transporter SKTS_RS09960 PF03379 CcmB protein SKTS_RS09965 PF01578 Cytochrome C assembly protein SKTS_RS09970 PF04995 Heme exporter protein D (CcmD) SKTS_RS09975 PF03100 CcmE SKTS_RS09980 PF01578 Cytochrome C assembly protein SKTS_RS09980 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal SKTS_RS09985 PF08534 Redoxin SKTS_RS09990 PF03918 Cytochrome C biogenesis protein SKTS_RS10005 PF13406 Transglycosylase SLT domain SKTS_RS10015 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS10020 PF00342 Phosphoglucose isomerase SKTS_RS10025 PF00128 Alpha amylase, catalytic domain SKTS_RS10025 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SKTS_RS10025 PF02806 Alpha amylase, C-terminal all-beta domain SKTS_RS10030 PF00483 Nucleotidyl transferase SKTS_RS10040 PF09094 Domain of unknown function (DUF1925) SKTS_RS10040 PF03065 Glycosyl hydrolase family 57 SKTS_RS10040 PF09095 Domain of unknown function (DUF1926) SKTS_RS10045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SKTS_RS10060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SKTS_RS10065 PF02545 Maf-like protein SKTS_RS10070 PF02436 Conserved carboxylase domain SKTS_RS10070 PF00682 HMGL-like SKTS_RS10070 PF00364 Biotin-requiring enzyme SKTS_RS10075 PF02785 Biotin carboxylase C-terminal domain SKTS_RS10075 PF00289 Biotin carboxylase, N-terminal domain SKTS_RS10075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SKTS_RS10085 PF01783 Ribosomal L32p protein family SKTS_RS10090 PF02504 Fatty acid synthesis protein SKTS_RS10095 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SKTS_RS10095 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SKTS_RS10100 PF00698 Acyl transferase domain SKTS_RS10110 PF00550 Phosphopantetheine attachment site SKTS_RS10115 PF02801 Beta-ketoacyl synthase, C-terminal domain SKTS_RS10115 PF00109 Beta-ketoacyl synthase, N-terminal domain SKTS_RS10120 PF04715 Anthranilate synthase component I, N terminal region SKTS_RS10120 PF00425 chorismate binding enzyme SKTS_RS10155 PF09334 tRNA synthetases class I (M) SKTS_RS10155 PF08264 Anticodon-binding domain of tRNA SKTS_RS10155 PF01588 Putative tRNA binding domain SKTS_RS10160 PF10609 NUBPL iron-transfer P-loop NTPase SKTS_RS10165 PF00692 dUTPase SKTS_RS10180 PF00873 AcrB/AcrD/AcrF family SKTS_RS10200 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SKTS_RS10210 PF01791 DeoC/LacD family aldolase SKTS_RS10220 PF00158 Sigma-54 interaction domain SKTS_RS10220 PF02954 Bacterial regulatory protein, Fis family SKTS_RS10220 PF13185 GAF domain SKTS_RS10230 PF03588 Leucyl/phenylalanyl-tRNA protein transferase SKTS_RS10235 PF04376 Arginine-tRNA-protein transferase, N terminus SKTS_RS10235 PF04377 Arginine-tRNA-protein transferase, C terminus SKTS_RS10245 PF00924 Mechanosensitive ion channel SKTS_RS10245 PF05552 Conserved TM helix SKTS_RS10250 PF00303 Thymidylate synthase SKTS_RS10255 PF00186 Dihydrofolate reductase SKTS_RS10270 PF00571 CBS domain SKTS_RS10285 PF00873 AcrB/AcrD/AcrF family SKTS_RS10290 PF04480 Protein of unknown function (DUF559) SKTS_RS10315 PF00478 IMP dehydrogenase / GMP reductase domain SKTS_RS10315 PF00571 CBS domain SKTS_RS10320 PF00958 GMP synthase C terminal domain SKTS_RS10320 PF02540 NAD synthase SKTS_RS10320 PF00117 Glutamine amidotransferase class-I SKTS_RS10325 PF00484 Carbonic anhydrase SKTS_RS10350 PF00072 Response regulator receiver domain SKTS_RS10350 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SKTS_RS10350 PF00672 HAMP domain SKTS_RS10350 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS10350 PF01627 Hpt domain SKTS_RS10350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS10355 PF01734 Patatin-like phospholipase SKTS_RS10360 PF00877 NlpC/P60 family SKTS_RS10370 PF03109 ABC1 family SKTS_RS10380 PF04851 Type III restriction enzyme, res subunit SKTS_RS10380 PF13307 Helicase C-terminal domain SKTS_RS10390 PF00814 Glycoprotease family SKTS_RS10395 PF00583 Acetyltransferase (GNAT) family SKTS_RS10400 PF03167 Uracil DNA glycosylase superfamily SKTS_RS10405 PF04011 LemA family SKTS_RS10410 PF04536 TPM domain SKTS_RS10420 PF07690 Major Facilitator Superfamily SKTS_RS10425 PF03881 Fructosamine kinase SKTS_RS10430 PF00753 Metallo-beta-lactamase superfamily SKTS_RS10435 PF01966 HD domain SKTS_RS10440 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS10440 PF00563 EAL domain SKTS_RS10440 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS10445 PF00551 Formyl transferase SKTS_RS10445 PF02911 Formyl transferase, C-terminal domain SKTS_RS10445 PF01370 NAD dependent epimerase/dehydratase family SKTS_RS10450 PF01370 NAD dependent epimerase/dehydratase family SKTS_RS10450 PF02911 Formyl transferase, C-terminal domain SKTS_RS10450 PF00551 Formyl transferase SKTS_RS10460 PF01381 Helix-turn-helix SKTS_RS10470 PF00535 Glycosyl transferase family 2 SKTS_RS10475 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SKTS_RS10485 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase SKTS_RS10490 PF00535 Glycosyl transferase family 2 SKTS_RS10500 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase SKTS_RS10505 PF01569 PAP2 superfamily SKTS_RS10510 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS10510 PF05230 MASE2 domain SKTS_RS10515 PF01713 Smr domain SKTS_RS10520 PF07992 Pyridine nucleotide-disulphide oxidoreductase SKTS_RS10525 PF01580 FtsK/SpoIIIE family SKTS_RS10525 PF13491 4TM region of DNA translocase FtsK/SpoIIIE SKTS_RS10525 PF09397 Ftsk gamma domain SKTS_RS10525 PF17854 FtsK alpha domain SKTS_RS10535 PF03548 Outer membrane lipoprotein carrier protein LolA SKTS_RS10540 PF12002 MgsA AAA+ ATPase C terminal SKTS_RS10540 PF16193 AAA C-terminal domain SKTS_RS10540 PF00004 ATPase family associated with various cellular activities (AAA) SKTS_RS10550 PF02403 Seryl-tRNA synthetase N-terminal domain SKTS_RS10550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SKTS_RS10555 PF00497 Bacterial extracellular solute-binding proteins, family 3 SKTS_RS10555 PF01464 Transglycosylase SLT domain SKTS_RS10565 PF02661 Fic/DOC family SKTS_RS10570 PF05433 Glycine zipper 2TM domain SKTS_RS10590 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS10590 PF00072 Response regulator receiver domain SKTS_RS10595 PF00563 EAL domain SKTS_RS10595 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS10595 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS10600 PF00672 HAMP domain SKTS_RS10600 PF17149 Periplasmic sensor domain found in signal transduction proteins SKTS_RS10600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS10600 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS10600 PF01627 Hpt domain SKTS_RS10600 PF00072 Response regulator receiver domain SKTS_RS10645 PF05230 MASE2 domain SKTS_RS10645 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS10655 PF01066 CDP-alcohol phosphatidyltransferase SKTS_RS10660 PF01209 ubiE/COQ5 methyltransferase family SKTS_RS10670 PF00226 DnaJ domain SKTS_RS10670 PF01556 DnaJ C terminal domain SKTS_RS10700 PF06167 Glucose-regulated metallo-peptidase M90 SKTS_RS10710 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain SKTS_RS10710 PF06165 Glycosyltransferase family 36 SKTS_RS10710 PF10091 Putative glucoamylase SKTS_RS10715 PF01594 AI-2E family transporter SKTS_RS10720 PF04972 BON domain SKTS_RS10730 PF13091 PLD-like domain SKTS_RS10735 PF00691 OmpA family SKTS_RS10790 PF01594 AI-2E family transporter SKTS_RS10795 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS10795 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS10795 PF00563 EAL domain SKTS_RS10800 PF01593 Flavin containing amine oxidoreductase SKTS_RS10830 PF02675 S-adenosylmethionine decarboxylase SKTS_RS10835 PF00563 EAL domain SKTS_RS10835 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS10835 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS10840 PF05175 Methyltransferase small domain SKTS_RS10850 PF01546 Peptidase family M20/M25/M40 SKTS_RS10850 PF07687 Peptidase dimerisation domain SKTS_RS10855 PF03960 ArsC family SKTS_RS10870 PF00672 HAMP domain SKTS_RS10870 PF01627 Hpt domain SKTS_RS10870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS10870 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS10870 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SKTS_RS10870 PF00072 Response regulator receiver domain SKTS_RS10875 PF00563 EAL domain SKTS_RS10875 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS10875 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS10880 PF13537 Glutamine amidotransferase domain SKTS_RS10880 PF00733 Asparagine synthase SKTS_RS10890 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SKTS_RS10895 PF00132 Bacterial transferase hexapeptide (six repeats) SKTS_RS10895 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal SKTS_RS10895 PF14602 Hexapeptide repeat of succinyl-transferase SKTS_RS10900 PF00155 Aminotransferase class I and II SKTS_RS10920 PF02080 TrkA-C domain SKTS_RS10920 PF00999 Sodium/hydrogen exchanger family SKTS_RS10920 PF02254 TrkA-N domain SKTS_RS10940 PF00563 EAL domain SKTS_RS10940 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS10940 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS10950 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SKTS_RS10955 PF14489 QueF-like protein SKTS_RS10960 PF00563 EAL domain SKTS_RS10960 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS10960 PF08448 PAS fold SKTS_RS10965 PF06470 SMC proteins Flexible Hinge Domain SKTS_RS10965 PF02463 RecF/RecN/SMC N terminal domain SKTS_RS10975 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SKTS_RS10975 PF12826 Helix-hairpin-helix motif SKTS_RS10975 PF01653 NAD-dependent DNA ligase adenylation domain SKTS_RS10975 PF00533 BRCA1 C Terminus (BRCT) domain SKTS_RS10975 PF03120 NAD-dependent DNA ligase OB-fold domain SKTS_RS10980 PF00483 Nucleotidyl transferase SKTS_RS10995 PF01312 FlhB HrpN YscU SpaS Family SKTS_RS11000 PF01966 HD domain SKTS_RS11000 PF08335 GlnD PII-uridylyltransferase SKTS_RS11005 PF00557 Metallopeptidase family M24 SKTS_RS11015 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SKTS_RS11020 PF00072 Response regulator receiver domain SKTS_RS11030 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain SKTS_RS11030 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain SKTS_RS11110 PF02899 Phage integrase, N-terminal SAM-like domain SKTS_RS11110 PF00589 Phage integrase family SKTS_RS11115 PF00109 Beta-ketoacyl synthase, N-terminal domain SKTS_RS11115 PF02801 Beta-ketoacyl synthase, C-terminal domain SKTS_RS11135 PF01740 STAS domain SKTS_RS11135 PF00916 Sulfate permease family SKTS_RS11145 PF01208 Uroporphyrinogen decarboxylase (URO-D) SKTS_RS11150 PF00551 Formyl transferase SKTS_RS11150 PF02911 Formyl transferase, C-terminal domain SKTS_RS11150 PF01370 NAD dependent epimerase/dehydratase family SKTS_RS11160 PF00361 Proton-conducting membrane transporter SKTS_RS11165 PF00146 NADH dehydrogenase SKTS_RS11175 PF00361 Proton-conducting membrane transporter SKTS_RS11180 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SKTS_RS11185 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SKTS_RS11190 PF00665 Integrase core domain SKTS_RS11195 PF01695 IstB-like ATP binding protein SKTS_RS11210 PF00306 ATP synthase alpha/beta chain, C terminal domain SKTS_RS11210 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SKTS_RS11215 PF00213 ATP synthase delta (OSCP) subunit SKTS_RS11215 PF00430 ATP synthase B/B' CF(0) SKTS_RS11220 PF00137 ATP synthase subunit C SKTS_RS11225 PF00119 ATP synthase A chain SKTS_RS11240 PF02874 ATP synthase alpha/beta family, beta-barrel domain SKTS_RS11240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SKTS_RS11250 PF13091 PLD-like domain SKTS_RS11280 PF00175 Oxidoreductase NAD-binding domain SKTS_RS11280 PF00111 2Fe-2S iron-sulfur cluster binding domain SKTS_RS11280 PF00970 Oxidoreductase FAD-binding domain SKTS_RS11295 PF00873 AcrB/AcrD/AcrF family SKTS_RS11300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SKTS_RS11305 PF02321 Outer membrane efflux protein SKTS_RS11330 PF01545 Cation efflux family SKTS_RS11340 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS11340 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS11340 PF00563 EAL domain SKTS_RS11345 PF02630 SCO1/SenC SKTS_RS11350 PF02874 ATP synthase alpha/beta family, beta-barrel domain SKTS_RS11350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SKTS_RS11360 PF00005 ABC transporter SKTS_RS11360 PF12399 Branched-chain amino acid ATP-binding cassette transporter SKTS_RS11380 PF00005 ABC transporter SKTS_RS11380 PF08402 TOBE domain SKTS_RS11385 PF00528 Binding-protein-dependent transport system inner membrane component SKTS_RS11395 PF03459 TOBE domain SKTS_RS11395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SKTS_RS11405 PF00085 Thioredoxin SKTS_RS11410 PF00072 Response regulator receiver domain SKTS_RS11420 PF00873 AcrB/AcrD/AcrF family SKTS_RS11450 PF08281 Sigma-70, region 4 SKTS_RS11450 PF04542 Sigma-70 region 2 SKTS_RS11455 PF01451 Low molecular weight phosphotyrosine protein phosphatase SKTS_RS11475 PF01758 Sodium Bile acid symporter family SKTS_RS11480 PF01451 Low molecular weight phosphotyrosine protein phosphatase SKTS_RS11485 PF00581 Rhodanese-like domain SKTS_RS11490 PF01022 Bacterial regulatory protein, arsR family SKTS_RS11525 PF00085 Thioredoxin SKTS_RS11535 PF08281 Sigma-70, region 4 SKTS_RS11535 PF04542 Sigma-70 region 2 SKTS_RS11540 PF01966 HD domain SKTS_RS11550 PF00916 Sulfate permease family SKTS_RS11550 PF01740 STAS domain SKTS_RS11580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS11580 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS11585 PF00072 Response regulator receiver domain SKTS_RS11585 PF02954 Bacterial regulatory protein, Fis family SKTS_RS11585 PF00158 Sigma-54 interaction domain SKTS_RS11590 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS11590 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS11590 PF00563 EAL domain SKTS_RS11595 PF04055 Radical SAM superfamily SKTS_RS11595 PF06463 Molybdenum Cofactor Synthesis C SKTS_RS11610 PF12800 4Fe-4S binding domain SKTS_RS11610 PF13247 4Fe-4S dicluster domain SKTS_RS11615 PF00384 Molybdopterin oxidoreductase SKTS_RS11615 PF01568 Molydopterin dinucleotide binding domain SKTS_RS11615 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SKTS_RS11630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS11630 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS11630 PF00989 PAS fold SKTS_RS11635 PF00158 Sigma-54 interaction domain SKTS_RS11635 PF00072 Response regulator receiver domain SKTS_RS11635 PF02954 Bacterial regulatory protein, Fis family SKTS_RS11645 PF02597 ThiS family SKTS_RS11650 PF04055 Radical SAM superfamily SKTS_RS11650 PF06463 Molybdenum Cofactor Synthesis C SKTS_RS11660 PF01206 Sulfurtransferase TusA SKTS_RS11660 PF11823 Protein of unknown function (DUF3343) SKTS_RS11665 PF00037 4Fe-4S binding domain SKTS_RS11675 PF00977 Histidine biosynthesis protein SKTS_RS11690 PF00267 Gram-negative porin SKTS_RS11695 PF00384 Molybdopterin oxidoreductase SKTS_RS11695 PF01568 Molydopterin dinucleotide binding domain SKTS_RS11695 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SKTS_RS11695 PF10518 TAT (twin-arginine translocation) pathway signal sequence SKTS_RS11705 PF13247 4Fe-4S dicluster domain SKTS_RS11715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS11715 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS11715 PF02743 Cache domain SKTS_RS11720 PF00158 Sigma-54 interaction domain SKTS_RS11720 PF00072 Response regulator receiver domain SKTS_RS11720 PF02954 Bacterial regulatory protein, Fis family SKTS_RS11740 PF00916 Sulfate permease family SKTS_RS11740 PF01740 STAS domain SKTS_RS11745 PF00999 Sodium/hydrogen exchanger family SKTS_RS11750 PF00989 PAS fold SKTS_RS11750 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS11750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS11755 PF00072 Response regulator receiver domain SKTS_RS11755 PF00196 Bacterial regulatory proteins, luxR family SKTS_RS11765 PF03600 Citrate transporter SKTS_RS11775 PF00483 Nucleotidyl transferase SKTS_RS11780 PF13660 Domain of unknown function (DUF4147) SKTS_RS11780 PF05161 MOFRL family SKTS_RS11785 PF00535 Glycosyl transferase family 2 SKTS_RS11805 PF00230 Major intrinsic protein SKTS_RS11810 PF03976 Polyphosphate kinase 2 (PPK2) SKTS_RS11815 PF00999 Sodium/hydrogen exchanger family SKTS_RS11820 PF00690 Cation transporter/ATPase, N-terminus SKTS_RS11820 PF00689 Cation transporting ATPase, C-terminus SKTS_RS11850 PF00691 OmpA family SKTS_RS11855 PF00654 Voltage gated chloride channel SKTS_RS11885 PF00563 EAL domain SKTS_RS11885 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS11885 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS11890 PF00072 Response regulator receiver domain SKTS_RS11895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS11900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS11905 PF00989 PAS fold SKTS_RS11905 PF13426 PAS domain SKTS_RS11905 PF13188 PAS domain SKTS_RS11905 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS11905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS11910 PF00989 PAS fold SKTS_RS11910 PF13188 PAS domain SKTS_RS11910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS11910 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS11910 PF13426 PAS domain SKTS_RS11920 PF01820 D-ala D-ala ligase N-terminus SKTS_RS11920 PF07478 D-ala D-ala ligase C-terminus SKTS_RS11925 PF04107 Glutamate-cysteine ligase family 2(GCS2) SKTS_RS11935 PF00582 Universal stress protein family SKTS_RS11945 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS11945 PF00072 Response regulator receiver domain SKTS_RS11950 PF00072 Response regulator receiver domain SKTS_RS11955 PF00072 Response regulator receiver domain SKTS_RS11955 PF00486 Transcriptional regulatory protein, C terminal SKTS_RS11960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS11960 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS11970 PF01329 Pterin 4 alpha carbinolamine dehydratase SKTS_RS11975 PF00206 Lyase SKTS_RS11975 PF10415 Fumarase C C-terminus SKTS_RS11990 PF17991 Thioredoxin like C-terminal domain SKTS_RS11990 PF02683 Cytochrome C biogenesis protein transmembrane region SKTS_RS11990 PF00578 AhpC/TSA family SKTS_RS11995 PF01641 SelR domain SKTS_RS12000 PF00037 4Fe-4S binding domain SKTS_RS12000 PF11953 Domain of unknown function (DUF3470) SKTS_RS12010 PF07995 Glucose / Sorbosone dehydrogenase SKTS_RS12030 PF00128 Alpha amylase, catalytic domain SKTS_RS12030 PF16657 Maltogenic Amylase, C-terminal domain SKTS_RS12060 PF02630 SCO1/SenC SKTS_RS12065 PF01040 UbiA prenyltransferase family SKTS_RS12070 PF02628 Cytochrome oxidase assembly protein SKTS_RS12090 PF00510 Cytochrome c oxidase subunit III SKTS_RS12095 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 SKTS_RS12100 PF00115 Cytochrome C and Quinol oxidase polypeptide I SKTS_RS12105 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SKTS_RS12105 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SKTS_RS12120 PF08402 TOBE domain SKTS_RS12120 PF00005 ABC transporter SKTS_RS12125 PF00528 Binding-protein-dependent transport system inner membrane component SKTS_RS12130 PF00528 Binding-protein-dependent transport system inner membrane component SKTS_RS12135 PF13416 Bacterial extracellular solute-binding protein SKTS_RS12140 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SKTS_RS12140 PF00128 Alpha amylase, catalytic domain SKTS_RS12160 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SKTS_RS12160 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SKTS_RS12165 PF13638 PIN domain SKTS_RS12165 PF02562 PhoH-like protein SKTS_RS12175 PF03466 LysR substrate binding domain SKTS_RS12175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SKTS_RS12180 PF14437 MafB19-like deaminase SKTS_RS12200 PF00216 Bacterial DNA-binding protein SKTS_RS12205 PF03147 Ferredoxin-fold anticodon binding domain SKTS_RS12205 PF03483 B3/4 domain SKTS_RS12205 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SKTS_RS12205 PF03484 tRNA synthetase B5 domain SKTS_RS12205 PF01588 Putative tRNA binding domain SKTS_RS12210 PF01409 tRNA synthetases class II core domain (F) SKTS_RS12210 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SKTS_RS12215 PF00453 Ribosomal protein L20 SKTS_RS12220 PF01632 Ribosomal protein L35 SKTS_RS12225 PF00707 Translation initiation factor IF-3, C-terminal domain SKTS_RS12225 PF05198 Translation initiation factor IF-3, N-terminal domain SKTS_RS12230 PF02824 TGS domain SKTS_RS12230 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SKTS_RS12230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SKTS_RS12230 PF03129 Anticodon binding domain SKTS_RS12240 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal SKTS_RS12240 PF02769 AIR synthase related protein, C-terminal domain SKTS_RS12240 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SKTS_RS12250 PF03412 Peptidase C39 family SKTS_RS12250 PF00005 ABC transporter SKTS_RS12250 PF00664 ABC transporter transmembrane region SKTS_RS12255 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) SKTS_RS12255 PF00722 Glycosyl hydrolases family 16 SKTS_RS12280 PF00535 Glycosyl transferase family 2 SKTS_RS12300 PF03853 YjeF-related protein N-terminus SKTS_RS12300 PF01256 Carbohydrate kinase SKTS_RS12310 PF00563 EAL domain SKTS_RS12310 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS12310 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS12315 PF13458 Periplasmic binding protein SKTS_RS12320 PF02824 TGS domain SKTS_RS12320 PF04607 Region found in RelA / SpoT proteins SKTS_RS12320 PF13291 ACT domain SKTS_RS12325 PF03772 Competence protein SKTS_RS12325 PF00753 Metallo-beta-lactamase superfamily SKTS_RS12330 PF00563 EAL domain SKTS_RS12330 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS12330 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS12335 PF00005 ABC transporter SKTS_RS12340 PF02687 FtsX-like permease family SKTS_RS12340 PF12704 MacB-like periplasmic core domain SKTS_RS12355 PF02272 DHHA1 domain SKTS_RS12355 PF17768 RecJ OB domain SKTS_RS12355 PF01368 DHH family SKTS_RS12360 PF13194 Domain of unknown function (DUF4010) SKTS_RS12365 PF00013 KH domain SKTS_RS12365 PF12072 Domain of unknown function (DUF3552) SKTS_RS12365 PF01966 HD domain SKTS_RS12370 PF03975 CheD chemotactic sensory transduction SKTS_RS12375 PF05971 RNA methyltransferase SKTS_RS12400 PF01593 Flavin containing amine oxidoreductase SKTS_RS12405 PF14821 Threonine synthase N terminus SKTS_RS12405 PF00291 Pyridoxal-phosphate dependent enzyme SKTS_RS12410 PF01842 ACT domain SKTS_RS12410 PF00742 Homoserine dehydrogenase SKTS_RS12410 PF03447 Homoserine dehydrogenase, NAD binding domain SKTS_RS12415 PF00155 Aminotransferase class I and II SKTS_RS12425 PF13419 Haloacid dehalogenase-like hydrolase SKTS_RS12430 PF17149 Periplasmic sensor domain found in signal transduction proteins SKTS_RS12430 PF00672 HAMP domain SKTS_RS12430 PF00072 Response regulator receiver domain SKTS_RS12430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS12430 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS12430 PF01627 Hpt domain SKTS_RS12435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SKTS_RS12435 PF00672 HAMP domain SKTS_RS12440 PF00072 Response regulator receiver domain SKTS_RS12445 PF01584 CheW-like domain SKTS_RS12445 PF09078 CheY binding SKTS_RS12445 PF02895 Signal transducing histidine kinase, homodimeric domain SKTS_RS12445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS12445 PF01627 Hpt domain SKTS_RS12450 PF01584 CheW-like domain SKTS_RS12455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SKTS_RS12455 PF02203 Tar ligand binding domain homologue SKTS_RS12455 PF00672 HAMP domain SKTS_RS12460 PF08447 PAS fold SKTS_RS12460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SKTS_RS12460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SKTS_RS12460 PF08447 PAS fold SKTS_RS12465 PF01739 CheR methyltransferase, SAM binding domain SKTS_RS12465 PF03705 CheR methyltransferase, all-alpha domain SKTS_RS12470 PF03975 CheD chemotactic sensory transduction SKTS_RS12475 PF00072 Response regulator receiver domain SKTS_RS12475 PF01339 CheB methylesterase SKTS_RS12480 PF13466 STAS domain SKTS_RS12485 PF00072 Response regulator receiver domain SKTS_RS12485 PF00486 Transcriptional regulatory protein, C terminal SKTS_RS12490 PF07730 Histidine kinase SKTS_RS12490 PF05384 Sensor protein DegS SKTS_RS12490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS12495 PF00072 Response regulator receiver domain SKTS_RS12495 PF00196 Bacterial regulatory proteins, luxR family SKTS_RS12505 PF08668 HDOD domain SKTS_RS12505 PF00563 EAL domain SKTS_RS12510 PF01476 LysM domain SKTS_RS12510 PF01551 Peptidase family M23 SKTS_RS12520 PF01975 Survival protein SurE SKTS_RS12525 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SKTS_RS12525 PF00391 PEP-utilising enzyme, mobile domain SKTS_RS12525 PF02896 PEP-utilising enzyme, TIM barrel domain SKTS_RS12530 PF01327 Polypeptide deformylase SKTS_RS12535 PF01048 Phosphorylase superfamily SKTS_RS12540 PF00156 Phosphoribosyl transferase domain SKTS_RS12540 PF11734 TilS substrate C-terminal domain SKTS_RS12540 PF01171 PP-loop family SKTS_RS12545 PF01139 tRNA-splicing ligase RtcB SKTS_RS12555 PF00850 Histone deacetylase domain SKTS_RS12560 PF13607 Succinyl-CoA ligase like flavodoxin domain SKTS_RS12560 PF00583 Acetyltransferase (GNAT) family SKTS_RS12560 PF13380 CoA binding domain SKTS_RS12570 PF01008 Initiation factor 2 subunit family SKTS_RS12575 PF00596 Class II Aldolase and Adducin N-terminal domain SKTS_RS12580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SKTS_RS12580 PF18029 Glyoxalase-like domain SKTS_RS12585 PF01451 Low molecular weight phosphotyrosine protein phosphatase SKTS_RS12590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS12590 PF07730 Histidine kinase SKTS_RS12595 PF00072 Response regulator receiver domain SKTS_RS12595 PF00196 Bacterial regulatory proteins, luxR family SKTS_RS12600 PF00989 PAS fold SKTS_RS12600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS12600 PF08447 PAS fold SKTS_RS12600 PF13426 PAS domain SKTS_RS12600 PF13493 Domain of unknown function (DUF4118) SKTS_RS12600 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS12620 PF00005 ABC transporter SKTS_RS12635 PF00563 EAL domain SKTS_RS12635 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS12635 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS12680 PF07732 Multicopper oxidase SKTS_RS12680 PF00394 Multicopper oxidase SKTS_RS12690 PF01464 Transglycosylase SLT domain SKTS_RS12695 PF00196 Bacterial regulatory proteins, luxR family SKTS_RS12695 PF00072 Response regulator receiver domain SKTS_RS12705 PF00114 Pilin (bacterial filament) SKTS_RS12705 PF07963 Prokaryotic N-terminal methylation motif SKTS_RS12710 PF07963 Prokaryotic N-terminal methylation motif SKTS_RS12710 PF08334 Type II secretion system (T2SS), protein G SKTS_RS12715 PF07660 Secretin and TonB N terminus short domain SKTS_RS12715 PF03958 Bacterial type II/III secretion system short domain SKTS_RS12715 PF00263 Bacterial type II and III secretion system protein SKTS_RS12715 PF11741 AMIN domain SKTS_RS12740 PF00437 Type II/IV secretion system protein SKTS_RS12745 PF00482 Type II secretion system (T2SS), protein F SKTS_RS12750 PF07963 Prokaryotic N-terminal methylation motif SKTS_RS12750 PF08334 Type II secretion system (T2SS), protein G SKTS_RS12755 PF13426 PAS domain SKTS_RS12755 PF00563 EAL domain SKTS_RS12755 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS12760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS12760 PF07730 Histidine kinase SKTS_RS12760 PF05384 Sensor protein DegS SKTS_RS12770 PF00072 Response regulator receiver domain SKTS_RS12770 PF00196 Bacterial regulatory proteins, luxR family SKTS_RS12775 PF13493 Domain of unknown function (DUF4118) SKTS_RS12775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS12775 PF00989 PAS fold SKTS_RS12775 PF13426 PAS domain SKTS_RS12775 PF08447 PAS fold SKTS_RS12775 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS12780 PF00486 Transcriptional regulatory protein, C terminal SKTS_RS12780 PF00072 Response regulator receiver domain SKTS_RS12785 PF04358 DsrC like protein SKTS_RS12805 PF00749 tRNA synthetases class I (E and Q), catalytic domain SKTS_RS12810 PF17954 Quercetinase C-terminal cupin domain SKTS_RS12810 PF02678 Pirin SKTS_RS12825 PF01509 TruB family pseudouridylate synthase (N terminal domain) SKTS_RS12825 PF16198 tRNA pseudouridylate synthase B C-terminal domain SKTS_RS12825 PF09157 Pseudouridine synthase II TruB, C-terminal SKTS_RS12830 PF02033 Ribosome-binding factor A SKTS_RS12835 PF00009 Elongation factor Tu GTP binding domain SKTS_RS12835 PF11987 Translation-initiation factor 2 SKTS_RS12835 PF08364 Bacterial translation initiation factor IF-2 associated region SKTS_RS12835 PF04760 Translation initiation factor IF-2, N-terminal region SKTS_RS12840 PF08529 NusA N-terminal domain SKTS_RS12840 PF13184 NusA-like KH domain SKTS_RS12845 PF17384 RimP C-terminal SH3 domain SKTS_RS12845 PF02576 RimP N-terminal domain SKTS_RS12880 PF01747 ATP-sulfurylase SKTS_RS12880 PF14306 PUA-like domain SKTS_RS12885 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit SKTS_RS12885 PF13187 4Fe-4S dicluster domain SKTS_RS12890 PF00890 FAD binding domain SKTS_RS12900 PF07728 AAA domain (dynein-related subfamily) SKTS_RS12900 PF08406 CbbQ/NirQ/NorQ C-terminal SKTS_RS12915 PF18267 Rubredoxin NAD+ reductase C-terminal domain SKTS_RS12915 PF07992 Pyridine nucleotide-disulphide oxidoreductase SKTS_RS12915 PF04324 BFD-like [2Fe-2S] binding domain SKTS_RS12915 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SKTS_RS12915 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SKTS_RS12920 PF01568 Molydopterin dinucleotide binding domain SKTS_RS12920 PF00384 Molybdopterin oxidoreductase SKTS_RS12920 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SKTS_RS12925 PF00355 Rieske [2Fe-2S] domain SKTS_RS12930 PF00005 ABC transporter SKTS_RS12935 PF00528 Binding-protein-dependent transport system inner membrane component SKTS_RS12950 PF08376 Nitrate and nitrite sensing SKTS_RS12950 PF03861 ANTAR domain SKTS_RS12965 PF03412 Peptidase C39 family SKTS_RS12965 PF00005 ABC transporter SKTS_RS12965 PF00664 ABC transporter transmembrane region SKTS_RS12980 PF02132 RecR protein SKTS_RS12980 PF13662 Toprim domain SKTS_RS12985 PF02575 YbaB/EbfC DNA-binding family SKTS_RS12990 PF12170 DNA polymerase III tau subunit V interacting with alpha SKTS_RS12990 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding SKTS_RS12990 PF12169 DNA polymerase III subunits gamma and tau domain III SKTS_RS12995 PF00085 Thioredoxin SKTS_RS13010 PF13186 Iron-sulfur cluster-binding domain SKTS_RS13010 PF04055 Radical SAM superfamily SKTS_RS13015 PF17805 AsnC-like ligand binding domain SKTS_RS13015 PF13404 AsnC-type helix-turn-helix domain SKTS_RS13020 PF17805 AsnC-like ligand binding domain SKTS_RS13020 PF13404 AsnC-type helix-turn-helix domain SKTS_RS13025 PF17805 AsnC-like ligand binding domain SKTS_RS13035 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SKTS_RS13040 PF00127 Copper binding proteins, plastocyanin/azurin family SKTS_RS13045 PF09459 Ethylbenzene dehydrogenase SKTS_RS13050 PF03264 NapC/NirT cytochrome c family, N-terminal region SKTS_RS13055 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SKTS_RS13065 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SKTS_RS13065 PF01568 Molydopterin dinucleotide binding domain SKTS_RS13065 PF00384 Molybdopterin oxidoreductase SKTS_RS13070 PF12800 4Fe-4S binding domain SKTS_RS13070 PF12838 4Fe-4S dicluster domain SKTS_RS13075 PF00037 4Fe-4S binding domain SKTS_RS13075 PF12801 4Fe-4S binding domain SKTS_RS13080 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) SKTS_RS13115 PF00034 Cytochrome c SKTS_RS13120 PF00115 Cytochrome C and Quinol oxidase polypeptide I SKTS_RS13125 PF00510 Cytochrome c oxidase subunit III SKTS_RS13135 PF03150 Di-haem cytochrome c peroxidase SKTS_RS13135 PF00034 Cytochrome c SKTS_RS13140 PF03466 LysR substrate binding domain SKTS_RS13140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SKTS_RS13145 PF08406 CbbQ/NirQ/NorQ C-terminal SKTS_RS13145 PF07728 AAA domain (dynein-related subfamily) SKTS_RS13175 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS13180 PF00092 von Willebrand factor type A domain SKTS_RS13195 PF00005 ABC transporter SKTS_RS13200 PF13237 4Fe-4S dicluster domain SKTS_RS13200 PF12801 4Fe-4S binding domain SKTS_RS13205 PF12838 4Fe-4S dicluster domain SKTS_RS13210 PF05048 Periplasmic copper-binding protein (NosD) SKTS_RS13220 PF00034 Cytochrome c SKTS_RS13225 PF00034 Cytochrome c SKTS_RS13230 PF18793 Nitrous oxide reductase propeller repeat 2 SKTS_RS13230 PF13473 Cupredoxin-like domain SKTS_RS13230 PF18764 Nitrous oxide reductase propeller repeat SKTS_RS13235 PF00578 AhpC/TSA family SKTS_RS13240 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS13240 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS13240 PF00563 EAL domain SKTS_RS13250 PF02630 SCO1/SenC SKTS_RS13255 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS13255 PF00563 EAL domain SKTS_RS13255 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS13260 PF00072 Response regulator receiver domain SKTS_RS13260 PF01627 Hpt domain SKTS_RS13260 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS13260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS13265 PF00072 Response regulator receiver domain SKTS_RS13270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS13270 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS13270 PF00989 PAS fold SKTS_RS13280 PF02661 Fic/DOC family SKTS_RS13285 PF01695 IstB-like ATP binding protein SKTS_RS13290 PF00665 Integrase core domain SKTS_RS13345 PF00704 Glycosyl hydrolases family 18 SKTS_RS13345 PF06483 Chitinase C SKTS_RS13360 PF00563 EAL domain SKTS_RS13360 PF08668 HDOD domain SKTS_RS13370 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SKTS_RS13390 PF00849 RNA pseudouridylate synthase SKTS_RS13390 PF01479 S4 domain SKTS_RS13395 PF04079 Segregation and condensation complex subunit ScpB SKTS_RS13400 PF02616 Segregation and condensation protein ScpA SKTS_RS13410 PF01336 OB-fold nucleic acid binding domain SKTS_RS13410 PF00152 tRNA synthetases class II (D, K and N) SKTS_RS13415 PF00403 Heavy-metal-associated domain SKTS_RS13440 PF01523 Putative modulator of DNA gyrase SKTS_RS13445 PF00795 Carbon-nitrogen hydrolase SKTS_RS13460 PF13193 AMP-binding enzyme C-terminal domain SKTS_RS13460 PF00501 AMP-binding enzyme SKTS_RS13460 PF16177 Acetyl-coenzyme A synthetase N-terminus SKTS_RS13465 PF03710 Glutamate-ammonia ligase adenylyltransferase SKTS_RS13465 PF08335 GlnD PII-uridylyltransferase SKTS_RS13480 PF02578 Multi-copper polyphenol oxidoreductase laccase SKTS_RS13485 PF01479 S4 domain SKTS_RS13485 PF00849 RNA pseudouridylate synthase SKTS_RS13490 PF13525 Outer membrane lipoprotein SKTS_RS13495 PF00543 Nitrogen regulatory protein P-II SKTS_RS13500 PF00795 Carbon-nitrogen hydrolase SKTS_RS13500 PF02540 NAD synthase SKTS_RS13530 PF00588 SpoU rRNA Methylase family SKTS_RS13530 PF08032 RNA 2'-O ribose methyltransferase substrate binding SKTS_RS13535 PF00773 RNB domain SKTS_RS13535 PF00575 S1 RNA binding domain SKTS_RS13535 PF08461 Ribonuclease R winged-helix domain SKTS_RS13535 PF17876 Cold shock domain SKTS_RS13535 PF08206 Ribonuclease B OB domain SKTS_RS13545 PF00709 Adenylosuccinate synthetase SKTS_RS13550 PF13393 Histidyl-tRNA synthetase SKTS_RS13560 PF01145 SPFH domain / Band 7 family SKTS_RS13565 PF01145 SPFH domain / Band 7 family SKTS_RS13565 PF12221 Bacterial membrane protein N terminal SKTS_RS13570 PF01926 50S ribosome-binding GTPase SKTS_RS13570 PF16360 GTP-binding GTPase Middle Region SKTS_RS13570 PF13167 GTP-binding GTPase N-terminal SKTS_RS13575 PF17209 Hfq protein SKTS_RS13585 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SKTS_RS13585 PF01926 50S ribosome-binding GTPase SKTS_RS13590 PF13360 PQQ-like domain SKTS_RS13595 PF09976 Tetratricopeptide repeat-like domain SKTS_RS13600 PF13393 Histidyl-tRNA synthetase SKTS_RS13600 PF03129 Anticodon binding domain SKTS_RS13610 PF04551 GcpE protein SKTS_RS13615 PF13464 Domain of unknown function (DUF4115) SKTS_RS13625 PF04055 Radical SAM superfamily SKTS_RS13630 PF00334 Nucleoside diphosphate kinase SKTS_RS13640 PF03144 Elongation factor Tu domain 2 SKTS_RS13640 PF16658 Class II release factor RF3, C-terminal domain SKTS_RS13640 PF00009 Elongation factor Tu GTP binding domain SKTS_RS13650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SKTS_RS13650 PF07992 Pyridine nucleotide-disulphide oxidoreductase SKTS_RS13655 PF02817 e3 binding domain SKTS_RS13655 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SKTS_RS13655 PF00364 Biotin-requiring enzyme SKTS_RS13660 PF00456 Transketolase, thiamine diphosphate binding domain SKTS_RS13660 PF17831 Pyruvate dehydrogenase E1 component middle domain SKTS_RS13670 PF06463 Molybdenum Cofactor Synthesis C SKTS_RS13670 PF04055 Radical SAM superfamily SKTS_RS13680 PF00009 Elongation factor Tu GTP binding domain SKTS_RS13680 PF03144 Elongation factor Tu domain 2 SKTS_RS13680 PF00679 Elongation factor G C-terminus SKTS_RS13685 PF00271 Helicase conserved C-terminal domain SKTS_RS13685 PF00270 DEAD/DEAH box helicase SKTS_RS13700 PF01152 Bacterial-like globin SKTS_RS13705 PF02222 ATP-grasp domain SKTS_RS13705 PF01370 NAD dependent epimerase/dehydratase family SKTS_RS13715 PF00374 Nickel-dependent hydrogenase SKTS_RS13720 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SKTS_RS13725 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SKTS_RS13730 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SKTS_RS13730 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SKTS_RS13740 PF00155 Aminotransferase class I and II SKTS_RS13745 PF00563 EAL domain SKTS_RS13745 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS13745 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS13755 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SKTS_RS13755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SKTS_RS13755 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SKTS_RS13755 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SKTS_RS13755 PF10371 Domain of unknown function SKTS_RS13780 PF00005 ABC transporter SKTS_RS13785 PF13472 GDSL-like Lipase/Acylhydrolase family SKTS_RS13790 PF09308 LuxQ, periplasmic SKTS_RS13790 PF00072 Response regulator receiver domain SKTS_RS13790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS13790 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS13800 PF01625 Peptide methionine sulfoxide reductase SKTS_RS13810 PF05362 Lon protease (S16) C-terminal proteolytic domain SKTS_RS13810 PF00004 ATPase family associated with various cellular activities (AAA) SKTS_RS13810 PF02190 ATP-dependent protease La (LON) substrate-binding domain SKTS_RS13825 PF14759 Reductase C-terminal SKTS_RS13825 PF07992 Pyridine nucleotide-disulphide oxidoreductase SKTS_RS13830 PF13091 PLD-like domain SKTS_RS13835 PF12794 Mechanosensitive ion channel inner membrane domain 1 SKTS_RS13835 PF12795 Mechanosensitive ion channel porin domain SKTS_RS13835 PF00924 Mechanosensitive ion channel SKTS_RS13845 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SKTS_RS13845 PF02272 DHHA1 domain SKTS_RS13845 PF01411 tRNA synthetases class II (A) SKTS_RS13855 PF02631 RecX family SKTS_RS13860 PF00154 recA bacterial DNA recombination protein SKTS_RS13870 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS13870 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS13870 PF00563 EAL domain SKTS_RS13875 PF02464 Competence-damaged protein SKTS_RS13880 PF04608 Phosphatidylglycerophosphatase A SKTS_RS13885 PF02769 AIR synthase related protein, C-terminal domain SKTS_RS13885 PF00586 AIR synthase related protein, N-terminal domain SKTS_RS13905 PF00005 ABC transporter SKTS_RS13905 PF12848 ABC transporter SKTS_RS13905 PF16326 ABC transporter C-terminal domain SKTS_RS13920 PF00563 EAL domain SKTS_RS13920 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS13920 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS13930 PF02772 S-adenosylmethionine synthetase, central domain SKTS_RS13930 PF02773 S-adenosylmethionine synthetase, C-terminal domain SKTS_RS13930 PF00438 S-adenosylmethionine synthetase, N-terminal domain SKTS_RS13935 PF05175 Methyltransferase small domain SKTS_RS13945 PF05099 Tellurite resistance protein TerB SKTS_RS13945 PF00226 DnaJ domain SKTS_RS13970 PF00011 Hsp20/alpha crystallin family SKTS_RS13975 PF01161 Phosphatidylethanolamine-binding protein SKTS_RS13980 PF01636 Phosphotransferase enzyme family SKTS_RS13985 PF08448 PAS fold SKTS_RS13985 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS13985 PF00563 EAL domain SKTS_RS13995 PF13187 4Fe-4S dicluster domain SKTS_RS13995 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit SKTS_RS14000 PF00890 FAD binding domain SKTS_RS14005 PF06965 Na+/H+ antiporter 1 SKTS_RS14005 PF13462 Thioredoxin SKTS_RS14010 PF02127 Aminopeptidase I zinc metalloprotease (M18) SKTS_RS14015 PF13167 GTP-binding GTPase N-terminal SKTS_RS14015 PF16360 GTP-binding GTPase Middle Region SKTS_RS14015 PF01926 50S ribosome-binding GTPase SKTS_RS14035 PF00141 Peroxidase SKTS_RS14040 PF04055 Radical SAM superfamily SKTS_RS14045 PF00753 Metallo-beta-lactamase superfamily SKTS_RS14045 PF00581 Rhodanese-like domain SKTS_RS14050 PF01145 SPFH domain / Band 7 family SKTS_RS14050 PF16200 C-terminal region of band_7 SKTS_RS14055 PF02954 Bacterial regulatory protein, Fis family SKTS_RS14055 PF00072 Response regulator receiver domain SKTS_RS14055 PF00158 Sigma-54 interaction domain SKTS_RS14060 PF10518 TAT (twin-arginine translocation) pathway signal sequence SKTS_RS14060 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SKTS_RS14060 PF00384 Molybdopterin oxidoreductase SKTS_RS14060 PF01568 Molydopterin dinucleotide binding domain SKTS_RS14065 PF13247 4Fe-4S dicluster domain SKTS_RS14090 PF08298 PrkA AAA domain SKTS_RS14090 PF06798 PrkA serine protein kinase C-terminal domain SKTS_RS14095 PF04285 Protein of unknown function (DUF444) SKTS_RS14100 PF04293 SpoVR like protein SKTS_RS14105 PF13635 Domain of unknown function (DUF4143) SKTS_RS14105 PF13173 AAA domain SKTS_RS14115 PF09107 Elongation factor SelB, winged helix SKTS_RS14115 PF03144 Elongation factor Tu domain 2 SKTS_RS14115 PF09106 Elongation factor SelB, winged helix SKTS_RS14115 PF00009 Elongation factor Tu GTP binding domain SKTS_RS14120 PF03841 L-seryl-tRNA selenium transferase SKTS_RS14120 PF12390 Selenocysteine synthase N terminal SKTS_RS14125 PF04216 Protein involved in formate dehydrogenase formation SKTS_RS14130 PF01292 Prokaryotic cytochrome b561 SKTS_RS14135 PF13247 4Fe-4S dicluster domain SKTS_RS14135 PF09163 Formate dehydrogenase N, transmembrane SKTS_RS14145 PF00579 tRNA synthetases class I (W and Y) SKTS_RS14150 PF02163 Peptidase family M50 SKTS_RS14155 PF01300 Telomere recombination SKTS_RS14160 PF02811 PHP domain SKTS_RS14165 PF04279 Intracellular septation protein A SKTS_RS14170 PF03795 YCII-related domain SKTS_RS14185 PF01966 HD domain SKTS_RS14185 PF11871 Domain of unknown function (DUF3391) SKTS_RS14190 PF01668 SmpB protein SKTS_RS14195 PF03364 Polyketide cyclase / dehydrase and lipid transport SKTS_RS14200 PF03658 RnfH family Ubiquitin SKTS_RS14215 PF01546 Peptidase family M20/M25/M40 SKTS_RS14215 PF07687 Peptidase dimerisation domain SKTS_RS14225 PF01842 ACT domain SKTS_RS14240 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SKTS_RS14240 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SKTS_RS14240 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SKTS_RS14240 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SKTS_RS14245 PF00892 EamA-like transporter family SKTS_RS14255 PF01699 Sodium/calcium exchanger protein SKTS_RS14290 PF00268 Ribonucleotide reductase, small chain SKTS_RS14295 PF00317 Ribonucleotide reductase, all-alpha domain SKTS_RS14295 PF03477 ATP cone domain SKTS_RS14295 PF02867 Ribonucleotide reductase, barrel domain SKTS_RS14300 PF00005 ABC transporter SKTS_RS14305 PF12704 MacB-like periplasmic core domain SKTS_RS14305 PF02687 FtsX-like permease family SKTS_RS14330 PF00551 Formyl transferase SKTS_RS14330 PF01842 ACT domain SKTS_RS14335 PF01510 N-acetylmuramoyl-L-alanine amidase SKTS_RS14350 PF00343 Carbohydrate phosphorylase SKTS_RS14355 PF07715 TonB-dependent Receptor Plug Domain SKTS_RS14355 PF00593 TonB dependent receptor SKTS_RS14360 PF00158 Sigma-54 interaction domain SKTS_RS14360 PF00072 Response regulator receiver domain SKTS_RS14360 PF02954 Bacterial regulatory protein, Fis family SKTS_RS14365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS14365 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS14375 PF01590 GAF domain SKTS_RS14375 PF00360 Phytochrome region SKTS_RS14375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS14375 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS14375 PF08446 PAS fold SKTS_RS14380 PF01966 HD domain SKTS_RS14395 PF00072 Response regulator receiver domain SKTS_RS14395 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS14395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS14395 PF13188 PAS domain SKTS_RS14395 PF08448 PAS fold SKTS_RS14400 PF00158 Sigma-54 interaction domain SKTS_RS14400 PF02954 Bacterial regulatory protein, Fis family SKTS_RS14400 PF00072 Response regulator receiver domain SKTS_RS14405 PF00916 Sulfate permease family SKTS_RS14405 PF01740 STAS domain SKTS_RS14410 PF09828 Chromate resistance exported protein SKTS_RS14415 PF00916 Sulfate permease family SKTS_RS14415 PF01740 STAS domain SKTS_RS14425 PF00916 Sulfate permease family SKTS_RS14425 PF01740 STAS domain SKTS_RS14430 PF00072 Response regulator receiver domain SKTS_RS14430 PF00486 Transcriptional regulatory protein, C terminal SKTS_RS14435 PF08521 Two-component sensor kinase N-terminal SKTS_RS14435 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS14435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS14445 PF00916 Sulfate permease family SKTS_RS14445 PF01740 STAS domain SKTS_RS14450 PF00361 Proton-conducting membrane transporter SKTS_RS14470 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SKTS_RS14475 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SKTS_RS14480 PF01926 50S ribosome-binding GTPase SKTS_RS14480 PF07650 KH domain SKTS_RS14485 PF14622 Ribonuclease-III-like SKTS_RS14485 PF00035 Double-stranded RNA binding motif SKTS_RS14495 PF10502 Signal peptidase, peptidase S26 SKTS_RS14500 PF06421 GTP-binding protein LepA C-terminus SKTS_RS14500 PF03144 Elongation factor Tu domain 2 SKTS_RS14500 PF00009 Elongation factor Tu GTP binding domain SKTS_RS14500 PF00679 Elongation factor G C-terminus SKTS_RS14510 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SKTS_RS14510 PF00437 Type II/IV secretion system protein SKTS_RS14515 PF00437 Type II/IV secretion system protein SKTS_RS14525 PF00085 Thioredoxin SKTS_RS14530 PF00472 RF-1 domain SKTS_RS14540 PF08448 PAS fold SKTS_RS14540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS14540 PF08447 PAS fold SKTS_RS14550 PF00550 Phosphopantetheine attachment site SKTS_RS14555 PF02801 Beta-ketoacyl synthase, C-terminal domain SKTS_RS14555 PF00109 Beta-ketoacyl synthase, N-terminal domain SKTS_RS14560 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SKTS_RS14575 PF02630 SCO1/SenC SKTS_RS14580 PF09190 DALR domain SKTS_RS14580 PF01406 tRNA synthetases class I (C) catalytic domain SKTS_RS14585 PF00672 HAMP domain SKTS_RS14585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SKTS_RS14595 PF08497 Radical SAM N-terminal SKTS_RS14595 PF04055 Radical SAM superfamily SKTS_RS14595 PF11842 Domain of unknown function (DUF3362) SKTS_RS14600 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB SKTS_RS14605 PF01381 Helix-turn-helix SKTS_RS14620 PF05973 Phage derived protein Gp49-like (DUF891) SKTS_RS14665 PF04185 Phosphoesterase family SKTS_RS14670 PF01618 MotA/TolQ/ExbB proton channel family SKTS_RS14695 PF18381 YcaO cyclodehydratase C-terminal domain SKTS_RS14695 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding SKTS_RS14745 PF12146 Serine aminopeptidase, S33 SKTS_RS14750 PF02954 Bacterial regulatory protein, Fis family SKTS_RS14750 PF00158 Sigma-54 interaction domain SKTS_RS14750 PF00072 Response regulator receiver domain SKTS_RS14755 PF00206 Lyase SKTS_RS14755 PF08328 Adenylosuccinate lyase C-terminal SKTS_RS14760 PF00480 ROK family SKTS_RS14765 PF02580 D-Tyr-tRNA(Tyr) deacylase SKTS_RS14785 PF01661 Macro domain SKTS_RS14805 PF05175 Methyltransferase small domain SKTS_RS14805 PF17827 PrmC N-terminal domain SKTS_RS14810 PF00472 RF-1 domain SKTS_RS14810 PF03462 PCRF domain SKTS_RS14815 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SKTS_RS14815 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SKTS_RS14815 PF01488 Shikimate / quinate 5-dehydrogenase SKTS_RS14820 PF01136 Peptidase family U32 SKTS_RS14820 PF16325 Peptidase family U32 C-terminal domain SKTS_RS14825 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SKTS_RS14825 PF07733 Bacterial DNA polymerase III alpha NTPase domain SKTS_RS14825 PF02811 PHP domain SKTS_RS14825 PF01336 OB-fold nucleic acid binding domain SKTS_RS14825 PF14579 Helix-hairpin-helix motif SKTS_RS14830 PF10672 S-adenosylmethionine-dependent methyltransferase SKTS_RS14840 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain SKTS_RS14840 PF00749 tRNA synthetases class I (E and Q), catalytic domain SKTS_RS14855 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SKTS_RS14860 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SKTS_RS14865 PF00149 Calcineurin-like phosphoesterase SKTS_RS14870 PF00793 DAHP synthetase I family SKTS_RS14870 PF18152 DAHP synthase ferredoxin-like domain SKTS_RS14875 PF00072 Response regulator receiver domain SKTS_RS14880 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS14885 PF00465 Iron-containing alcohol dehydrogenase SKTS_RS14890 PF00005 ABC transporter SKTS_RS14890 PF02687 FtsX-like permease family SKTS_RS14890 PF12704 MacB-like periplasmic core domain SKTS_RS14895 PF12704 MacB-like periplasmic core domain SKTS_RS14895 PF02687 FtsX-like permease family SKTS_RS14895 PF00005 ABC transporter SKTS_RS14900 PF12704 MacB-like periplasmic core domain SKTS_RS14900 PF02687 FtsX-like permease family SKTS_RS14900 PF00005 ABC transporter SKTS_RS14915 PF00293 NUDIX domain SKTS_RS14950 PF04073 Aminoacyl-tRNA editing domain SKTS_RS14950 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SKTS_RS14950 PF03129 Anticodon binding domain SKTS_RS14955 PF01464 Transglycosylase SLT domain SKTS_RS14955 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain SKTS_RS14965 PF00563 EAL domain SKTS_RS14965 PF12792 CSS motif domain associated with EAL SKTS_RS14970 PF00072 Response regulator receiver domain SKTS_RS14975 PF08447 PAS fold SKTS_RS14975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SKTS_RS14975 PF13426 PAS domain SKTS_RS14980 PF00563 EAL domain SKTS_RS14980 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS14980 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS15010 PF00871 Acetokinase family SKTS_RS15015 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase SKTS_RS15015 PF09364 XFP N-terminal domain SKTS_RS15015 PF09363 XFP C-terminal domain SKTS_RS15020 PF01497 Periplasmic binding protein SKTS_RS15025 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SKTS_RS15025 PF07685 CobB/CobQ-like glutamine amidotransferase domain SKTS_RS15030 PF02654 Cobalamin-5-phosphate synthase SKTS_RS15040 PF02277 Phosphoribosyltransferase SKTS_RS15045 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase SKTS_RS15050 PF12557 Cob(I)alamin adenosyltransferase N terminal SKTS_RS15050 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP SKTS_RS15060 PF07715 TonB-dependent Receptor Plug Domain SKTS_RS15060 PF00593 TonB dependent receptor SKTS_RS15080 PF00578 AhpC/TSA family SKTS_RS15095 PF03631 Virulence factor BrkB SKTS_RS15100 PF03358 NADPH-dependent FMN reductase SKTS_RS15115 PF00708 Acylphosphatase SKTS_RS15125 PF00753 Metallo-beta-lactamase superfamily SKTS_RS15125 PF12706 Beta-lactamase superfamily domain SKTS_RS15130 PF13404 AsnC-type helix-turn-helix domain SKTS_RS15130 PF01037 Lrp/AsnC ligand binding domain SKTS_RS15135 PF01925 Sulfite exporter TauE/SafE SKTS_RS15145 PF00005 ABC transporter SKTS_RS15145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SKTS_RS15150 PF00005 ABC transporter SKTS_RS15150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SKTS_RS15155 PF00528 Binding-protein-dependent transport system inner membrane component SKTS_RS15155 PF12911 N-terminal TM domain of oligopeptide transport permease C SKTS_RS15160 PF00528 Binding-protein-dependent transport system inner membrane component SKTS_RS15165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SKTS_RS15170 PF03458 UPF0126 domain SKTS_RS15175 PF00682 HMGL-like SKTS_RS15175 PF08502 LeuA allosteric (dimerisation) domain SKTS_RS15180 PF00027 Cyclic nucleotide-binding domain SKTS_RS15180 PF13545 Crp-like helix-turn-helix domain SKTS_RS15210 PF16199 Radical_SAM C-terminal domain SKTS_RS15210 PF04055 Radical SAM superfamily SKTS_RS15215 PF01136 Peptidase family U32 SKTS_RS15220 PF01136 Peptidase family U32 SKTS_RS15225 PF02036 SCP-2 sterol transfer family SKTS_RS15240 PF00625 Guanylate kinase SKTS_RS15245 PF01192 RNA polymerase Rpb6 SKTS_RS15250 PF02824 TGS domain SKTS_RS15250 PF13291 ACT domain SKTS_RS15250 PF04607 Region found in RelA / SpoT proteins SKTS_RS15255 PF01042 Endoribonuclease L-PSP SKTS_RS15260 PF00270 DEAD/DEAH box helicase SKTS_RS15260 PF17191 RecG wedge domain SKTS_RS15260 PF00271 Helicase conserved C-terminal domain SKTS_RS15285 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ SKTS_RS15290 PF04345 Chorismate lyase SKTS_RS15295 PF01040 UbiA prenyltransferase family SKTS_RS15310 PF00563 EAL domain SKTS_RS15310 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS15310 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS15330 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SKTS_RS15335 PF00581 Rhodanese-like domain SKTS_RS15335 PF00753 Metallo-beta-lactamase superfamily SKTS_RS15345 PF00581 Rhodanese-like domain SKTS_RS15350 PF02635 DsrE/DsrF-like family SKTS_RS15355 PF04945 YHS domain SKTS_RS15365 PF01925 Sulfite exporter TauE/SafE SKTS_RS15375 PF13230 Glutamine amidotransferases class-II SKTS_RS15380 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS15380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS15385 PF00072 Response regulator receiver domain SKTS_RS15385 PF00486 Transcriptional regulatory protein, C terminal SKTS_RS15390 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS15390 PF00563 EAL domain SKTS_RS15390 PF08448 PAS fold SKTS_RS15400 PF00753 Metallo-beta-lactamase superfamily SKTS_RS15400 PF10996 Beta-Casp domain SKTS_RS15400 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SKTS_RS15410 PF01965 DJ-1/PfpI family SKTS_RS15415 PF04461 Protein of unknown function (DUF520) SKTS_RS15420 PF06865 Pyrimidine/purine nucleoside phosphorylase SKTS_RS15430 PF00764 Arginosuccinate synthase SKTS_RS15435 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SKTS_RS15435 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SKTS_RS15440 PF00202 Aminotransferase class-III SKTS_RS15450 PF01649 Ribosomal protein S20 SKTS_RS15460 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS15460 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS15460 PF00563 EAL domain SKTS_RS15495 PF07728 AAA domain (dynein-related subfamily) SKTS_RS15495 PF12102 Domain of unknown function (DUF3578) SKTS_RS15685 PF02195 ParB-like nuclease domain SKTS_RS15690 PF02195 ParB-like nuclease domain SKTS_RS15770 PF02796 Helix-turn-helix domain of resolvase SKTS_RS15770 PF00239 Resolvase, N terminal domain SKTS_RS15785 PF06114 IrrE N-terminal-like domain SKTS_RS15790 PF01381 Helix-turn-helix SKTS_RS15870 PF00271 Helicase conserved C-terminal domain SKTS_RS15870 PF12137 RNA polymerase recycling family C-terminal SKTS_RS15870 PF00176 SNF2 family N-terminal domain SKTS_RS15870 PF18337 RapA N-terminal Tudor like domain SKTS_RS15870 PF18339 RapA N-terminal Tudor like domain 1 SKTS_RS15875 PF03852 DNA mismatch endonuclease Vsr SKTS_RS15880 PF00145 C-5 cytosine-specific DNA methylase SKTS_RS15980 PF07929 Plasmid pRiA4b ORF-3-like protein SKTS_RS16060 PF02195 ParB-like nuclease domain SKTS_RS16065 PF01555 DNA methylase SKTS_RS16140 PF00239 Resolvase, N terminal domain SKTS_RS16140 PF02796 Helix-turn-helix domain of resolvase SKTS_RS16160 PF06114 IrrE N-terminal-like domain SKTS_RS16165 PF01381 Helix-turn-helix SKTS_RS16190 PF01966 HD domain SKTS_RS16195 PF01741 Large-conductance mechanosensitive channel, MscL SKTS_RS16200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS16200 PF00672 HAMP domain SKTS_RS16200 PF07730 Histidine kinase SKTS_RS16200 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term SKTS_RS16205 PF00072 Response regulator receiver domain SKTS_RS16205 PF00196 Bacterial regulatory proteins, luxR family SKTS_RS16210 PF14824 Sirohaem biosynthesis protein central SKTS_RS16210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SKTS_RS16210 PF10414 Sirohaem synthase dimerisation region SKTS_RS16215 PF07660 Secretin and TonB N terminus short domain SKTS_RS16215 PF03958 Bacterial type II/III secretion system short domain SKTS_RS16215 PF00263 Bacterial type II and III secretion system protein SKTS_RS16215 PF11741 AMIN domain SKTS_RS16225 PF04350 Pilus assembly protein, PilO SKTS_RS16235 PF11104 Type IV pilus assembly protein PilM; SKTS_RS16240 PF00912 Transglycosylase SKTS_RS16240 PF00905 Penicillin binding protein transpeptidase domain SKTS_RS16240 PF17092 Penicillin-binding protein OB-like domain SKTS_RS16250 PF07238 PilZ domain SKTS_RS16250 PF07317 Flagellar regulator YcgR SKTS_RS16255 PF00490 Delta-aminolevulinic acid dehydratase SKTS_RS16260 PF12627 Probable RNA and SrmB- binding site of polymerase A SKTS_RS16260 PF01743 Poly A polymerase head domain SKTS_RS16260 PF01966 HD domain SKTS_RS16270 PF14718 Soluble lytic murein transglycosylase L domain SKTS_RS16270 PF01464 Transglycosylase SLT domain SKTS_RS16275 PF01242 6-pyruvoyl tetrahydropterin synthase SKTS_RS16290 PF00696 Amino acid kinase family SKTS_RS16290 PF01842 ACT domain SKTS_RS16290 PF13840 ACT domain SKTS_RS16295 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SKTS_RS16300 PF09179 TilS substrate binding domain SKTS_RS16300 PF01171 PP-loop family SKTS_RS16300 PF11734 TilS substrate C-terminal domain SKTS_RS16305 PF03480 Bacterial extracellular solute-binding protein, family 7 SKTS_RS16310 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component SKTS_RS16315 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SKTS_RS16320 PF12792 CSS motif domain associated with EAL SKTS_RS16320 PF00563 EAL domain SKTS_RS16325 PF12849 PBP superfamily domain SKTS_RS16330 PF00528 Binding-protein-dependent transport system inner membrane component SKTS_RS16335 PF00528 Binding-protein-dependent transport system inner membrane component SKTS_RS16340 PF00005 ABC transporter SKTS_RS16345 PF12729 Four helix bundle sensory module for signal transduction SKTS_RS16345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SKTS_RS16345 PF00672 HAMP domain SKTS_RS16350 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SKTS_RS16350 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SKTS_RS16350 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SKTS_RS16350 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SKTS_RS16355 PF00809 Pterin binding enzyme SKTS_RS16360 PF01434 Peptidase family M41 SKTS_RS16360 PF06480 FtsH Extracellular SKTS_RS16360 PF17862 AAA+ lid domain SKTS_RS16360 PF00004 ATPase family associated with various cellular activities (AAA) SKTS_RS16365 PF01728 FtsJ-like methyltransferase SKTS_RS16370 PF01985 CRS1 / YhbY (CRM) domain SKTS_RS16380 PF01272 Transcription elongation factor, GreA/GreB, C-term SKTS_RS16380 PF03449 Transcription elongation factor, N-terminal SKTS_RS16385 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SKTS_RS16385 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SKTS_RS16385 PF02142 MGS-like domain SKTS_RS16390 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SKTS_RS16390 PF00117 Glutamine amidotransferase class-I SKTS_RS16395 PF05173 Dihydrodipicolinate reductase, C-terminus SKTS_RS16395 PF01113 Dihydrodipicolinate reductase, N-terminus SKTS_RS16400 PF04355 SmpA / OmlA family SKTS_RS16405 PF01475 Ferric uptake regulator family SKTS_RS16410 PF02463 RecF/RecN/SMC N terminal domain SKTS_RS16415 PF01513 ATP-NAD kinase SKTS_RS16420 PF01628 HrcA protein C terminal domain SKTS_RS16430 PF12729 Four helix bundle sensory module for signal transduction SKTS_RS16430 PF00672 HAMP domain SKTS_RS16430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SKTS_RS16435 PF00762 Ferrochelatase SKTS_RS16445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SKTS_RS16445 PF00672 HAMP domain SKTS_RS16445 PF02743 Cache domain SKTS_RS16450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS16450 PF07730 Histidine kinase SKTS_RS16455 PF00196 Bacterial regulatory proteins, luxR family SKTS_RS16455 PF00072 Response regulator receiver domain SKTS_RS16460 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS16460 PF00563 EAL domain SKTS_RS16460 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS16465 PF01025 GrpE SKTS_RS16470 PF00012 Hsp70 protein SKTS_RS16475 PF00684 DnaJ central domain SKTS_RS16475 PF01556 DnaJ C terminal domain SKTS_RS16475 PF00226 DnaJ domain SKTS_RS16485 PF00114 Pilin (bacterial filament) SKTS_RS16485 PF07963 Prokaryotic N-terminal methylation motif SKTS_RS16515 PF00535 Glycosyl transferase family 2 SKTS_RS16530 PF01040 UbiA prenyltransferase family SKTS_RS16540 PF01565 FAD binding domain SKTS_RS16540 PF04030 D-arabinono-1,4-lactone oxidase SKTS_RS16545 PF00106 short chain dehydrogenase SKTS_RS16560 PF00535 Glycosyl transferase family 2 SKTS_RS16565 PF05045 Rhamnan synthesis protein F SKTS_RS16565 PF14307 Glycosyltransferase WbsX SKTS_RS16570 PF00398 Ribosomal RNA adenine dimethylase SKTS_RS16585 PF00005 ABC transporter SKTS_RS16585 PF14524 Wzt C-terminal domain SKTS_RS16595 PF02899 Phage integrase, N-terminal SAM-like domain SKTS_RS16595 PF00589 Phage integrase family SKTS_RS16600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SKTS_RS16600 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SKTS_RS16610 PF01245 Ribosomal protein L19 SKTS_RS16615 PF01746 tRNA (Guanine-1)-methyltransferase SKTS_RS16620 PF01782 RimM N-terminal domain SKTS_RS16620 PF05239 PRC-barrel domain SKTS_RS16625 PF00886 Ribosomal protein S16 SKTS_RS16630 PF00448 SRP54-type protein, GTPase domain SKTS_RS16630 PF02978 Signal peptide binding domain SKTS_RS16630 PF02881 SRP54-type protein, helical bundle domain SKTS_RS16640 PF00571 CBS domain SKTS_RS16640 PF03471 Transporter associated domain SKTS_RS16640 PF01595 Cyclin M transmembrane N-terminal domain SKTS_RS16645 PF00437 Type II/IV secretion system protein SKTS_RS16645 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SKTS_RS16650 PF00482 Type II secretion system (T2SS), protein F SKTS_RS16655 PF06750 Bacterial Peptidase A24 N-terminal domain SKTS_RS16655 PF01478 Type IV leader peptidase family SKTS_RS16660 PF01121 Dephospho-CoA kinase SKTS_RS16665 PF01435 Peptidase family M48 SKTS_RS16670 PF01967 MoaC family SKTS_RS16680 PF01022 Bacterial regulatory protein, arsR family SKTS_RS16685 PF00384 Molybdopterin oxidoreductase SKTS_RS16685 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SKTS_RS16685 PF01568 Molydopterin dinucleotide binding domain SKTS_RS16690 PF12800 4Fe-4S binding domain SKTS_RS16690 PF13247 4Fe-4S dicluster domain SKTS_RS16695 PF04976 DMSO reductase anchor subunit (DmsC) SKTS_RS16700 PF00581 Rhodanese-like domain SKTS_RS16705 PF01206 Sulfurtransferase TusA SKTS_RS16710 PF13686 DsrE/DsrF/DrsH-like family SKTS_RS16720 PF00873 AcrB/AcrD/AcrF family SKTS_RS16740 PF07963 Prokaryotic N-terminal methylation motif SKTS_RS16740 PF00114 Pilin (bacterial filament) SKTS_RS16775 PF06074 Protein of unknown function (DUF935) SKTS_RS16800 PF10145 Phage-related minor tail protein SKTS_RS16800 PF01464 Transglycosylase SLT domain SKTS_RS16800 PF01551 Peptidase family M23 SKTS_RS16830 PF00816 H-NS histone family SKTS_RS16890 PF10124 Mu-like prophage major head subunit gpT SKTS_RS16910 PF17482 Phage tail sheath C-terminal domain SKTS_RS16910 PF04984 Phage tail sheath protein subtilisin-like domain SKTS_RS16995 PF02911 Formyl transferase, C-terminal domain SKTS_RS16995 PF00551 Formyl transferase SKTS_RS17005 PF02254 TrkA-N domain SKTS_RS17005 PF00999 Sodium/hydrogen exchanger family SKTS_RS17005 PF02080 TrkA-C domain SKTS_RS17010 PF01380 SIS domain SKTS_RS17010 PF00571 CBS domain SKTS_RS17025 PF03968 OstA-like protein SKTS_RS17030 PF12399 Branched-chain amino acid ATP-binding cassette transporter SKTS_RS17030 PF00005 ABC transporter SKTS_RS17035 PF04552 Sigma-54, DNA binding domain SKTS_RS17035 PF00309 Sigma-54 factor, Activator interacting domain (AID) SKTS_RS17035 PF04963 Sigma-54 factor, core binding domain SKTS_RS17040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SKTS_RS17045 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SKTS_RS17050 PF07475 HPr Serine kinase C-terminal domain SKTS_RS17050 PF02603 HPr Serine kinase N terminus SKTS_RS17055 PF03668 P-loop ATPase protein family SKTS_RS17075 PF02441 Flavoprotein SKTS_RS17095 PF01521 Iron-sulphur cluster biosynthesis SKTS_RS17100 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SKTS_RS17100 PF07685 CobB/CobQ-like glutamine amidotransferase domain SKTS_RS17110 PF13247 4Fe-4S dicluster domain SKTS_RS17120 PF07992 Pyridine nucleotide-disulphide oxidoreductase SKTS_RS17120 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SKTS_RS17135 PF04358 DsrC like protein SKTS_RS17145 PF02635 DsrE/DsrF-like family SKTS_RS17150 PF02635 DsrE/DsrF-like family SKTS_RS17155 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SKTS_RS17155 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SKTS_RS17160 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SKTS_RS17160 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SKTS_RS17170 PF09559 Cas6 Crispr SKTS_RS17175 PF04358 DsrC like protein SKTS_RS17180 PF00581 Rhodanese-like domain SKTS_RS17190 PF03099 Biotin/lipoate A/B protein ligase family SKTS_RS17190 PF02237 Biotin protein ligase C terminal domain SKTS_RS17195 PF03309 Type III pantothenate kinase SKTS_RS17200 PF00294 pfkB family carbohydrate kinase SKTS_RS17210 PF00149 Calcineurin-like phosphoesterase SKTS_RS17220 PF01145 SPFH domain / Band 7 family SKTS_RS17230 PF00881 Nitroreductase family SKTS_RS17240 PF13361 UvrD-like helicase C-terminal domain SKTS_RS17240 PF00580 UvrD/REP helicase N-terminal domain SKTS_RS17255 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase SKTS_RS17270 PF01476 LysM domain SKTS_RS17270 PF08525 Opacity-associated protein A N-terminal motif SKTS_RS17270 PF01551 Peptidase family M23 SKTS_RS17275 PF02810 SEC-C motif SKTS_RS17275 PF07517 SecA DEAD-like domain SKTS_RS17275 PF01043 SecA preprotein cross-linking domain SKTS_RS17275 PF07516 SecA Wing and Scaffold domain SKTS_RS17280 PF00994 Probable molybdopterin binding domain SKTS_RS17290 PF02230 Phospholipase/Carboxylesterase SKTS_RS17295 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SKTS_RS17305 PF05164 Cell division protein ZapA SKTS_RS17315 PF01812 5-formyltetrahydrofolate cyclo-ligase family SKTS_RS17325 PF00448 SRP54-type protein, GTPase domain SKTS_RS17325 PF02881 SRP54-type protein, helical bundle domain SKTS_RS17330 PF00675 Insulinase (Peptidase family M16) SKTS_RS17330 PF05193 Peptidase M16 inactive domain SKTS_RS17335 PF05193 Peptidase M16 inactive domain SKTS_RS17345 PF01467 Cytidylyltransferase-like SKTS_RS17350 PF00037 4Fe-4S binding domain SKTS_RS17360 PF06827 Zinc finger found in FPG and IleRS SKTS_RS17360 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SKTS_RS17360 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SKTS_RS17375 PF00005 ABC transporter SKTS_RS17375 PF13732 Domain of unknown function (DUF4162) SKTS_RS17385 PF03550 Outer membrane lipoprotein LolB SKTS_RS17390 PF00288 GHMP kinases N terminal domain SKTS_RS17390 PF08544 GHMP kinases C terminal SKTS_RS17400 PF14572 Phosphoribosyl synthetase-associated domain SKTS_RS17400 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SKTS_RS17405 PF14693 Ribosomal protein TL5, C-terminal domain SKTS_RS17405 PF01386 Ribosomal L25p family SKTS_RS17410 PF01195 Peptidyl-tRNA hydrolase SKTS_RS17415 PF01479 S4 domain SKTS_RS17415 PF00849 RNA pseudouridylate synthase SKTS_RS17425 PF01926 50S ribosome-binding GTPase SKTS_RS17425 PF06071 Protein of unknown function (DUF933) SKTS_RS17430 PF07769 psiF repeat SKTS_RS17445 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal SKTS_RS17445 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SKTS_RS17460 PF00374 Nickel-dependent hydrogenase SKTS_RS17465 PF08447 PAS fold SKTS_RS17465 PF08448 PAS fold SKTS_RS17465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS17470 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal SKTS_RS17470 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SKTS_RS17475 PF13247 4Fe-4S dicluster domain SKTS_RS17480 PF03916 Polysulphide reductase, NrfD SKTS_RS17485 PF00374 Nickel-dependent hydrogenase SKTS_RS17490 PF01750 Hydrogenase maturation protease SKTS_RS17495 PF01455 HupF/HypC family SKTS_RS17510 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SKTS_RS17515 PF02492 CobW/HypB/UreG, nucleotide-binding domain SKTS_RS17520 PF01797 Transposase IS200 like SKTS_RS17525 PF00708 Acylphosphatase SKTS_RS17525 PF17788 HypF Kae1-like domain SKTS_RS17525 PF01300 Telomere recombination SKTS_RS17525 PF07503 HypF finger SKTS_RS17530 PF01455 HupF/HypC family SKTS_RS17535 PF01924 Hydrogenase formation hypA family SKTS_RS17545 PF02769 AIR synthase related protein, C-terminal domain SKTS_RS17545 PF00586 AIR synthase related protein, N-terminal domain SKTS_RS17550 PF02954 Bacterial regulatory protein, Fis family SKTS_RS17550 PF00158 Sigma-54 interaction domain SKTS_RS17550 PF00072 Response regulator receiver domain SKTS_RS17555 PF02769 AIR synthase related protein, C-terminal domain SKTS_RS17555 PF00586 AIR synthase related protein, N-terminal domain SKTS_RS17560 PF00593 TonB dependent receptor SKTS_RS17560 PF07715 TonB-dependent Receptor Plug Domain SKTS_RS17565 PF01925 Sulfite exporter TauE/SafE SKTS_RS17570 PF00291 Pyridoxal-phosphate dependent enzyme SKTS_RS17570 PF00585 C-terminal regulatory domain of Threonine dehydratase SKTS_RS17575 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SKTS_RS17580 PF01895 PhoU domain SKTS_RS17585 PF02541 Ppx/GppA phosphatase family SKTS_RS17600 PF03562 MltA specific insert domain SKTS_RS17600 PF06725 3D domain SKTS_RS17605 PF04379 ApaG domain SKTS_RS17620 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SKTS_RS17625 PF13473 Cupredoxin-like domain SKTS_RS17630 PF03239 Iron permease FTR1 family SKTS_RS17645 PF00313 'Cold-shock' DNA-binding domain SKTS_RS17650 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS17650 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS17650 PF00563 EAL domain SKTS_RS17670 PF00216 Bacterial DNA-binding protein SKTS_RS17675 PF03466 LysR substrate binding domain SKTS_RS17675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SKTS_RS17685 PF01435 Peptidase family M48 SKTS_RS17700 PF03695 Uncharacterised protein family (UPF0149) SKTS_RS17700 PF02810 SEC-C motif SKTS_RS17705 PF04102 SlyX SKTS_RS17720 PF03900 Porphobilinogen deaminase, C-terminal domain SKTS_RS17720 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SKTS_RS17725 PF02602 Uroporphyrinogen-III synthase HemD SKTS_RS17730 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase SKTS_RS17760 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase SKTS_RS17765 PF04264 YceI-like domain SKTS_RS17770 PF03466 LysR substrate binding domain SKTS_RS17770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SKTS_RS17775 PF00111 2Fe-2S iron-sulfur cluster binding domain SKTS_RS17775 PF00970 Oxidoreductase FAD-binding domain SKTS_RS17775 PF00175 Oxidoreductase NAD-binding domain SKTS_RS17785 PF01177 Asp/Glu/Hydantoin racemase SKTS_RS17800 PF03091 CutA1 divalent ion tolerance protein SKTS_RS17805 PF11412 Disulphide bond corrector protein DsbC SKTS_RS17805 PF02683 Cytochrome C biogenesis protein transmembrane region SKTS_RS17810 PF01220 Dehydroquinase class II SKTS_RS17815 PF00364 Biotin-requiring enzyme SKTS_RS17820 PF00289 Biotin carboxylase, N-terminal domain SKTS_RS17820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SKTS_RS17820 PF02785 Biotin carboxylase C-terminal domain SKTS_RS17835 PF08669 Glycine cleavage T-protein C-terminal barrel domain SKTS_RS17835 PF01571 Aminomethyltransferase folate-binding domain SKTS_RS17840 PF01597 Glycine cleavage H-protein SKTS_RS17845 PF02347 Glycine cleavage system P-protein SKTS_RS17850 PF08534 Redoxin SKTS_RS17855 PF02347 Glycine cleavage system P-protein SKTS_RS17870 PF00111 2Fe-2S iron-sulfur cluster binding domain SKTS_RS17870 PF00175 Oxidoreductase NAD-binding domain SKTS_RS17870 PF00970 Oxidoreductase FAD-binding domain SKTS_RS17875 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS17875 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS17875 PF00563 EAL domain SKTS_RS17880 PF02754 Cysteine-rich domain SKTS_RS17880 PF13183 4Fe-4S dicluster domain SKTS_RS17885 PF03232 Ubiquinone biosynthesis protein COQ7 SKTS_RS17900 PF00005 ABC transporter SKTS_RS17900 PF12848 ABC transporter SKTS_RS17925 PF02951 Prokaryotic glutathione synthetase, N-terminal domain SKTS_RS17925 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain SKTS_RS17930 PF02424 ApbE family SKTS_RS17940 PF00381 PTS HPr component phosphorylation site SKTS_RS17945 PF05524 PEP-utilising enzyme, N-terminal SKTS_RS17945 PF02896 PEP-utilising enzyme, TIM barrel domain SKTS_RS17945 PF00391 PEP-utilising enzyme, mobile domain SKTS_RS17950 PF00561 alpha/beta hydrolase fold SKTS_RS17955 PF00561 alpha/beta hydrolase fold SKTS_RS17955 PF07021 Methionine biosynthesis protein MetW SKTS_RS17960 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS17960 PF00989 PAS fold SKTS_RS17960 PF16736 Single Cache-like SKTS_RS17960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS17965 PF00072 Response regulator receiver domain SKTS_RS17965 PF00486 Transcriptional regulatory protein, C terminal SKTS_RS17975 PF07690 Major Facilitator Superfamily SKTS_RS17980 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS17980 PF00563 EAL domain SKTS_RS17980 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS17985 PF03372 Endonuclease/Exonuclease/phosphatase family SKTS_RS17990 PF00156 Phosphoribosyl transferase domain SKTS_RS18000 PF02637 GatB domain SKTS_RS18000 PF02934 GatB/GatE catalytic domain SKTS_RS18005 PF01425 Amidase SKTS_RS18010 PF02686 Glu-tRNAGln amidotransferase C subunit SKTS_RS18025 PF04093 rod shape-determining protein MreD SKTS_RS18030 PF00905 Penicillin binding protein transpeptidase domain SKTS_RS18030 PF03717 Penicillin-binding Protein dimerisation domain SKTS_RS18035 PF01098 Cell cycle protein SKTS_RS18040 PF09335 SNARE associated Golgi protein SKTS_RS18045 PF01339 CheB methylesterase SKTS_RS18045 PF00072 Response regulator receiver domain SKTS_RS18050 PF03975 CheD chemotactic sensory transduction SKTS_RS18055 PF01739 CheR methyltransferase, SAM binding domain SKTS_RS18055 PF03705 CheR methyltransferase, all-alpha domain SKTS_RS18060 PF01584 CheW-like domain SKTS_RS18065 PF00672 HAMP domain SKTS_RS18065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SKTS_RS18065 PF02203 Tar ligand binding domain homologue SKTS_RS18075 PF09078 CheY binding SKTS_RS18075 PF01584 CheW-like domain SKTS_RS18075 PF02895 Signal transducing histidine kinase, homodimeric domain SKTS_RS18075 PF01627 Hpt domain SKTS_RS18075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS18085 PF00072 Response regulator receiver domain SKTS_RS18090 PF00672 HAMP domain SKTS_RS18090 PF02743 Cache domain SKTS_RS18090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SKTS_RS18095 PF08769 Sporulation initiation factor Spo0A C terminal SKTS_RS18095 PF00072 Response regulator receiver domain SKTS_RS18100 PF00563 EAL domain SKTS_RS18100 PF03707 Bacterial signalling protein N terminal repeat SKTS_RS18100 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS18105 PF00196 Bacterial regulatory proteins, luxR family SKTS_RS18105 PF00072 Response regulator receiver domain SKTS_RS18110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS18110 PF07730 Histidine kinase SKTS_RS18110 PF05231 MASE1 SKTS_RS18115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS18115 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS18135 PF11808 Phosphate regulon sensor protein PhoR SKTS_RS18135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS18135 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS18135 PF00989 PAS fold SKTS_RS18140 PF00486 Transcriptional regulatory protein, C terminal SKTS_RS18140 PF00072 Response regulator receiver domain SKTS_RS18145 PF01300 Telomere recombination SKTS_RS18150 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SKTS_RS18150 PF02843 Phosphoribosylglycinamide synthetase, C domain SKTS_RS18150 PF02844 Phosphoribosylglycinamide synthetase, N domain SKTS_RS18155 PF01808 AICARFT/IMPCHase bienzyme SKTS_RS18155 PF02142 MGS-like domain SKTS_RS18160 PF02954 Bacterial regulatory protein, Fis family SKTS_RS18165 PF01207 Dihydrouridine synthase (Dus) SKTS_RS18170 PF01116 Fructose-bisphosphate aldolase class-II SKTS_RS18175 PF00224 Pyruvate kinase, barrel domain SKTS_RS18175 PF02887 Pyruvate kinase, alpha/beta domain SKTS_RS18180 PF00162 Phosphoglycerate kinase SKTS_RS18185 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SKTS_RS18185 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SKTS_RS18190 PF02779 Transketolase, pyrimidine binding domain SKTS_RS18190 PF02780 Transketolase, C-terminal domain SKTS_RS18190 PF00456 Transketolase, thiamine diphosphate binding domain SKTS_RS18195 PF00459 Inositol monophosphatase family SKTS_RS18205 PF04452 RNA methyltransferase SKTS_RS18210 PF00696 Amino acid kinase family SKTS_RS18210 PF00583 Acetyltransferase (GNAT) family SKTS_RS18220 PF08448 PAS fold SKTS_RS18220 PF00990 Diguanylate cyclase, GGDEF domain SKTS_RS18220 PF00563 EAL domain SKTS_RS18230 PF00534 Glycosyl transferases group 1 SKTS_RS18230 PF13439 Glycosyltransferase Family 4 SKTS_RS18235 PF00664 ABC transporter transmembrane region SKTS_RS18235 PF00005 ABC transporter SKTS_RS18240 PF00534 Glycosyl transferases group 1 SKTS_RS18240 PF13439 Glycosyltransferase Family 4 SKTS_RS18250 PF00534 Glycosyl transferases group 1 SKTS_RS18250 PF13579 Glycosyl transferase 4-like domain SKTS_RS18275 PF13635 Domain of unknown function (DUF4143) SKTS_RS18275 PF13173 AAA domain SKTS_RS18280 PF02397 Bacterial sugar transferase SKTS_RS18285 PF13439 Glycosyltransferase Family 4 SKTS_RS18285 PF00534 Glycosyl transferases group 1 SKTS_RS18290 PF00534 Glycosyl transferases group 1 SKTS_RS18290 PF13439 Glycosyltransferase Family 4 SKTS_RS18315 PF00535 Glycosyl transferase family 2 SKTS_RS18325 PF00005 ABC transporter SKTS_RS18325 PF14524 Wzt C-terminal domain SKTS_RS18360 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SKTS_RS18365 PF08484 C-methyltransferase C-terminal domain SKTS_RS18365 PF08421 Putative zinc binding domain SKTS_RS18370 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SKTS_RS18375 PF16363 GDP-mannose 4,6 dehydratase SKTS_RS18380 PF00483 Nucleotidyl transferase SKTS_RS18385 PF02780 Transketolase, C-terminal domain SKTS_RS18385 PF02779 Transketolase, pyrimidine binding domain SKTS_RS18385 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SKTS_RS18390 PF02348 Cytidylyltransferase SKTS_RS18390 PF13472 GDSL-like Lipase/Acylhydrolase family SKTS_RS18395 PF00171 Aldehyde dehydrogenase family SKTS_RS18410 PF08666 SAF domain SKTS_RS18410 PF03102 NeuB family SKTS_RS18415 PF00483 Nucleotidyl transferase SKTS_RS18415 PF01050 Mannose-6-phosphate isomerase SKTS_RS18420 PF16363 GDP-mannose 4,6 dehydratase SKTS_RS18425 PF16363 GDP-mannose 4,6 dehydratase SKTS_RS18430 PF04321 RmlD substrate binding domain SKTS_RS18435 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SKTS_RS18440 PF00483 Nucleotidyl transferase SKTS_RS18450 PF16363 GDP-mannose 4,6 dehydratase SKTS_RS18455 PF01061 ABC-2 type transporter SKTS_RS18460 PF00005 ABC transporter SKTS_RS18480 PF14306 PUA-like domain SKTS_RS18480 PF01747 ATP-sulfurylase SKTS_RS18485 PF03109 ABC1 family SKTS_RS18495 PF01209 ubiE/COQ5 methyltransferase family SKTS_RS18505 PF00310 Glutamine amidotransferases class-II SKTS_RS18505 PF01645 Conserved region in glutamate synthase SKTS_RS18505 PF01493 GXGXG motif SKTS_RS18505 PF04898 Glutamate synthase central domain SKTS_RS18510 PF07992 Pyridine nucleotide-disulphide oxidoreductase SKTS_RS18510 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SKTS_RS18515 PF01208 Uroporphyrinogen decarboxylase (URO-D) SKTS_RS18520 PF18074 Primosomal protein N C-terminal domain SKTS_RS18520 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SKTS_RS18520 PF17764 3′ DNA-binding domain (3′BD) SKTS_RS18520 PF00271 Helicase conserved C-terminal domain SKTS_RS18520 PF00270 DEAD/DEAH box helicase SKTS_RS18525 PF00750 tRNA synthetases class I (R) SKTS_RS18525 PF03485 Arginyl tRNA synthetase N terminal domain SKTS_RS18525 PF05746 DALR anticodon binding domain SKTS_RS18535 PF01323 DSBA-like thioredoxin domain SKTS_RS18540 PF00072 Response regulator receiver domain SKTS_RS18540 PF00196 Bacterial regulatory proteins, luxR family SKTS_RS18560 PF00474 Sodium:solute symporter family SKTS_RS18570 PF00929 Exonuclease SKTS_RS18570 PF14480 DNA polymerase III polC-type N-terminus I SKTS_RS18570 PF11490 DNA polymerase III polC-type N-terminus II SKTS_RS18570 PF07733 Bacterial DNA polymerase III alpha NTPase domain SKTS_RS18570 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SKTS_RS18570 PF14579 Helix-hairpin-helix motif SKTS_RS18570 PF02811 PHP domain SKTS_RS18575 PF00474 Sodium:solute symporter family SKTS_RS18575 PF00474 Sodium:solute symporter family SKTS_RS18585 PF00486 Transcriptional regulatory protein, C terminal SKTS_RS18585 PF00072 Response regulator receiver domain SKTS_RS18590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SKTS_RS18590 PF00512 His Kinase A (phospho-acceptor) domain SKTS_RS18600 PF00437 Type II/IV secretion system protein SKTS_RS18620 PF02508 Rnf-Nqr subunit, membrane protein SKTS_RS18625 PF04060 Putative Fe-S cluster SKTS_RS18630 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SKTS_RS18630 PF13237 4Fe-4S dicluster domain SKTS_RS18630 PF13375 RnfC Barrel sandwich hybrid domain SKTS_RS18630 PF10531 SLBB domain SKTS_RS18635 PF03116 NQR2, RnfD, RnfE family SKTS_RS18640 PF04205 FMN-binding domain SKTS_RS18645 PF02508 Rnf-Nqr subunit, membrane protein SKTS_RS18650 PF03658 RnfH family Ubiquitin SKTS_RS18655 PF01380 SIS domain SKTS_RS18660 PF00132 Bacterial transferase hexapeptide (six repeats) SKTS_RS18660 PF14602 Hexapeptide repeat of succinyl-transferase SKTS_RS18660 PF12804 MobA-like NTP transferase domain SKTS_RS18665 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SKTS_RS18665 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SKTS_RS18670 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SKTS_RS18670 PF02874 ATP synthase alpha/beta family, beta-barrel domain SKTS_RS18675 PF00231 ATP synthase SKTS_RS18680 PF02874 ATP synthase alpha/beta family, beta-barrel domain SKTS_RS18680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SKTS_RS18680 PF00306 ATP synthase alpha/beta chain, C terminal domain SKTS_RS18685 PF00213 ATP synthase delta (OSCP) subunit SKTS_RS18690 PF00430 ATP synthase B/B' CF(0) SKTS_RS18695 PF00137 ATP synthase subunit C SKTS_RS18700 PF00119 ATP synthase A chain SKTS_RS18710 PF02195 ParB-like nuclease domain SKTS_RS18710 PF17762 HTH domain found in ParB protein SKTS_RS18715 PF13614 AAA domain SKTS_RS18720 PF02527 rRNA small subunit methyltransferase G SKTS_RS18725 PF01134 Glucose inhibited division protein A SKTS_RS18725 PF13932 GidA associated domain SKTS_RS18730 PF12631 MnmE helical domain SKTS_RS18730 PF01926 50S ribosome-binding GTPase SKTS_RS18730 PF10396 GTP-binding protein TrmE N-terminus SKTS_RS18735 PF14849 YidC periplasmic domain SKTS_RS18735 PF02096 60Kd inner membrane protein SKTS_RS18740 PF01809 Putative membrane protein insertion efficiency factor SKTS_RS18745 PF00825 Ribonuclease P SKTS_RS18750 PF00468 Ribosomal protein L34 SKTS_RS18765 PF02132 RecR protein SKTS_RS18765 PF13662 Toprim domain