SUDEN_RS00005	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
SUDEN_RS00010	SM00480	DNA polymerase III beta subunit
SUDEN_RS00015	SM00387	Histidine kinase-like ATPases
SUDEN_RS00015	SM00433	TopoisomeraseII
SUDEN_RS00040	SM00387	Histidine kinase-like ATPases
SUDEN_RS00045	SM00448	cheY-homologous receiver domain
SUDEN_RS00045	SM00862	Transcriptional regulatory protein, C terminal
SUDEN_RS00050	SM00710	Parallel beta-helix repeats
SUDEN_RS00050	SM00912	haemagglutination activity domain
SUDEN_RS00080	SM00671	Sel1-like repeats.
SUDEN_RS00095	SM00782	PhnA Zinc-Ribbon
SUDEN_RS00100	SM00267	diguanylate cyclase
SUDEN_RS00105	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SUDEN_RS00110	SM00400	zinc finger
SUDEN_RS00110	SM00493	SUDEN_RS00110
SUDEN_RS00120	SM00487	DEAD-like helicases superfamily
SUDEN_RS00120	SM00490	helicase superfamily c-terminal domain
SUDEN_RS00175	SM00062	Bacterial periplasmic substrate-binding proteins
SUDEN_RS00175	SM00387	Histidine kinase-like ATPases
SUDEN_RS00210	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUDEN_RS00215	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUDEN_RS00320	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS00350	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SUDEN_RS00365	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS00395	SM00788	Adenylosuccinate synthetase
SUDEN_RS00410	SM00052	Putative diguanylate phosphodiesterase
SUDEN_RS00410	SM00267	diguanylate cyclase
SUDEN_RS00420	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
SUDEN_RS00560	SM00855	Phosphoglycerate mutase family
SUDEN_RS00590	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS00685	SM00316	Ribosomal protein S1-like RNA-binding domain
SUDEN_RS00685	SM00732	Likely ribonuclease with RNase H fold.
SUDEN_RS00715	SM00487	DEAD-like helicases superfamily
SUDEN_RS00715	SM00490	helicase superfamily c-terminal domain
SUDEN_RS00725	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS00820	SM00947	Carbonic anhydrase
SUDEN_RS00855	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUDEN_RS00855	SM00876	Biotin and Thiamin Synthesis associated domain
SUDEN_RS00865	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SUDEN_RS00865	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SUDEN_RS00865	SM00493	SUDEN_RS00865
SUDEN_RS00910	SM00861	Transketolase, pyrimidine binding domain
SUDEN_RS00920	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUDEN_RS00985	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUDEN_RS01050	SM00331	Sigma factor PP2C-like phosphatases
SUDEN_RS01050	SM00448	cheY-homologous receiver domain
SUDEN_RS01055	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUDEN_RS01065	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS01070	SM00363	S4 RNA-binding domain
SUDEN_RS01075	SM00116	Domain in cystathionine beta-synthase and other proteins.
SUDEN_RS01100	SM00267	diguanylate cyclase
SUDEN_RS01100	SM00448	cheY-homologous receiver domain
SUDEN_RS01110	SM00267	diguanylate cyclase
SUDEN_RS01225	SM00530	Helix-turn-helix XRE-family like proteins 
SUDEN_RS01290	SM00448	cheY-homologous receiver domain
SUDEN_RS01290	SM00862	Transcriptional regulatory protein, C terminal
SUDEN_RS01330	SM00852	Probable molybdopterin binding domain
SUDEN_RS01345	SM00448	cheY-homologous receiver domain
SUDEN_RS01345	SM00862	Transcriptional regulatory protein, C terminal
SUDEN_RS01350	SM00387	Histidine kinase-like ATPases
SUDEN_RS01350	SM00388	His Kinase A (phosphoacceptor) domain
SUDEN_RS01470	SM00448	cheY-homologous receiver domain
SUDEN_RS01475	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUDEN_RS01485	SM01403	SUDEN_RS01485
SUDEN_RS01505	SM01382	SUDEN_RS01505
SUDEN_RS01505	SM01383	SUDEN_RS01505
SUDEN_RS01520	SM00322	K homology RNA-binding domain
SUDEN_RS01540	SM01374	SUDEN_RS01540
SUDEN_RS01545	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SUDEN_RS01595	SM00316	Ribosomal protein S1-like RNA-binding domain
SUDEN_RS01600	SM00450	Rhodanese Homology Domain
SUDEN_RS01605	SM00830	Chorismate mutase type II
SUDEN_RS01610	SM00563	Phosphate acyltransferases
SUDEN_RS01630	SM00226	Low molecular weight phosphatase family
SUDEN_RS01635	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SUDEN_RS01640	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUDEN_RS01640	SM00387	Histidine kinase-like ATPases
SUDEN_RS01640	SM00388	His Kinase A (phosphoacceptor) domain
SUDEN_RS01645	SM00448	cheY-homologous receiver domain
SUDEN_RS01645	SM00862	Transcriptional regulatory protein, C terminal
SUDEN_RS01690	SM00363	S4 RNA-binding domain
SUDEN_RS01690	SM01390	SUDEN_RS01690
SUDEN_RS01695	SM00662	RNA polymerases D
SUDEN_RS01740	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SUDEN_RS01750	SM00861	Transketolase, pyrimidine binding domain
SUDEN_RS01755	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SUDEN_RS01760	SM00478	endonuclease III
SUDEN_RS01775	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SUDEN_RS01825	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SUDEN_RS01825	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SUDEN_RS01830	SM00649	Ribosomal protein L11/L12
SUDEN_RS01855	SM00663	RNA polymerase I subunit A N-terminus
SUDEN_RS01870	SM00838	Elongation factor G C-terminus
SUDEN_RS01870	SM00889	Elongation factor G, domain IV
SUDEN_RS01885	SM00937	SUDEN_RS01885
SUDEN_RS01925	SM00487	DEAD-like helicases superfamily
SUDEN_RS01925	SM00490	helicase superfamily c-terminal domain
SUDEN_RS01980	SM01005	Alanine racemase, C-terminal domain
SUDEN_RS01985	SM00052	Putative diguanylate phosphodiesterase
SUDEN_RS01985	SM00267	diguanylate cyclase
SUDEN_RS02010	SM01004	Delta-aminolevulinic acid dehydratase
SUDEN_RS02075	SM00271	DnaJ molecular chaperone homology domain
SUDEN_RS02120	SM00487	DEAD-like helicases superfamily
SUDEN_RS02120	SM00490	helicase superfamily c-terminal domain
SUDEN_RS02160	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS02160	SM00464	Found in ATP-dependent protease La (LON)
SUDEN_RS02165	SM00448	cheY-homologous receiver domain
SUDEN_RS02170	SM00387	Histidine kinase-like ATPases
SUDEN_RS02170	SM00388	His Kinase A (phosphoacceptor) domain
SUDEN_RS02170	SM00448	cheY-homologous receiver domain
SUDEN_RS02175	SM00091	PAS domain
SUDEN_RS02180	SM00465	GIY-YIG type nucleases (URI domain)
SUDEN_RS02210	SM01209	SUDEN_RS02210
SUDEN_RS02210	SM01210	SUDEN_RS02210
SUDEN_RS02230	SM00316	Ribosomal protein S1-like RNA-binding domain
SUDEN_RS02230	SM00322	K homology RNA-binding domain
SUDEN_RS02310	SM00028	Tetratricopeptide repeats
SUDEN_RS02345	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS02345	SM00962	SRP54-type protein, GTPase domain
SUDEN_RS02345	SM00963	SRP54-type protein, helical bundle domain
SUDEN_RS02400	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS02400	SM01086	C-terminal, D2-small domain, of ClpB protein
SUDEN_RS02430	SM00387	Histidine kinase-like ATPases
SUDEN_RS02465	SM00830	Chorismate mutase type II
SUDEN_RS02490	SM00861	Transketolase, pyrimidine binding domain
SUDEN_RS02510	SM01252	SUDEN_RS02510
SUDEN_RS02535	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS02545	SM00563	Phosphate acyltransferases
SUDEN_RS02555	SM01211	SUDEN_RS02555
SUDEN_RS02570	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SUDEN_RS02570	SM00245	tail specific protease
SUDEN_RS02610	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SUDEN_RS02635	SM00411	bacterial (prokaryotic) histone like domain
SUDEN_RS02675	SM00100	Cyclic nucleotide-monophosphate binding domain
SUDEN_RS02695	SM00478	endonuclease III
SUDEN_RS02695	SM00525	SUDEN_RS02695
SUDEN_RS02715	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS02715	SM01086	C-terminal, D2-small domain, of ClpB protein
SUDEN_RS02730	SM01234	SUDEN_RS02730
SUDEN_RS02740	SM01245	SUDEN_RS02740
SUDEN_RS02750	SM00732	Likely ribonuclease with RNase H fold.
SUDEN_RS02755	SM00052	Putative diguanylate phosphodiesterase
SUDEN_RS02755	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUDEN_RS02755	SM00091	PAS domain
SUDEN_RS02755	SM00267	diguanylate cyclase
SUDEN_RS02770	SM00448	cheY-homologous receiver domain
SUDEN_RS02770	SM00862	Transcriptional regulatory protein, C terminal
SUDEN_RS02775	SM00387	Histidine kinase-like ATPases
SUDEN_RS02775	SM00388	His Kinase A (phosphoacceptor) domain
SUDEN_RS02780	SM00347	helix_turn_helix multiple antibiotic resistance protein
SUDEN_RS02830	SM00955	SUDEN_RS02830
SUDEN_RS02865	SM00798	AICARFT/IMPCHase bienzyme
SUDEN_RS02865	SM00851	MGS-like domain
SUDEN_RS02885	SM00271	DnaJ molecular chaperone homology domain
SUDEN_RS02890	SM00422	helix_turn_helix, mercury resistance
SUDEN_RS02910	SM00479	SUDEN_RS02910
SUDEN_RS03090	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS03165	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUDEN_RS03185	SM00487	DEAD-like helicases superfamily
SUDEN_RS03185	SM00490	helicase superfamily c-terminal domain
SUDEN_RS03200	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUDEN_RS03200	SM00267	diguanylate cyclase
SUDEN_RS03215	SM00448	cheY-homologous receiver domain
SUDEN_RS03215	SM00862	Transcriptional regulatory protein, C terminal
SUDEN_RS03220	SM00387	Histidine kinase-like ATPases
SUDEN_RS03220	SM00388	His Kinase A (phosphoacceptor) domain
SUDEN_RS03220	SM00448	cheY-homologous receiver domain
SUDEN_RS03240	SM00342	helix_turn_helix, arabinose operon control protein
SUDEN_RS03240	SM00871	Bacterial transcription activator, effector binding domain
SUDEN_RS03245	SM00878	Biotin carboxylase C-terminal domain
SUDEN_RS03260	SM00448	cheY-homologous receiver domain
SUDEN_RS03260	SM00862	Transcriptional regulatory protein, C terminal
SUDEN_RS03265	SM00387	Histidine kinase-like ATPases
SUDEN_RS03295	SM00883	Chaperonin 10 Kd subunit
SUDEN_RS03315	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUDEN_RS03330	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SUDEN_RS03335	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS03335	SM00448	cheY-homologous receiver domain
SUDEN_RS03350	SM00434	DNA Topoisomerase IV
SUDEN_RS03360	SM00938	Nitrogen regulatory protein P-II
SUDEN_RS03375	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUDEN_RS03375	SM00091	PAS domain
SUDEN_RS03375	SM00267	diguanylate cyclase
SUDEN_RS03400	SM00327	von Willebrand factor (vWF) type A domain
SUDEN_RS03405	SM00028	Tetratricopeptide repeats
SUDEN_RS03440	SM00327	von Willebrand factor (vWF) type A domain
SUDEN_RS03445	SM00028	Tetratricopeptide repeats
SUDEN_RS03445	SM00327	von Willebrand factor (vWF) type A domain
SUDEN_RS03475	SM00387	Histidine kinase-like ATPases
SUDEN_RS03480	SM00448	cheY-homologous receiver domain
SUDEN_RS03480	SM00862	Transcriptional regulatory protein, C terminal
SUDEN_RS03485	SM00905	Dihydroneopterin aldolase
SUDEN_RS03490	SM01207	SUDEN_RS03490
SUDEN_RS03640	SM01321	SUDEN_RS03640
SUDEN_RS03655	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS03670	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS03670	SM00962	SRP54-type protein, GTPase domain
SUDEN_RS03765	SM01409	SUDEN_RS03765
SUDEN_RS03770	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SUDEN_RS03770	SM00954	Region found in RelA / SpoT proteins
SUDEN_RS03785	SM00646	SUDEN_RS03785
SUDEN_RS03805	SM01387	SUDEN_RS03805
SUDEN_RS03850	SM00052	Putative diguanylate phosphodiesterase
SUDEN_RS03850	SM00267	diguanylate cyclase
SUDEN_RS03865	SM00267	diguanylate cyclase
SUDEN_RS03900	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SUDEN_RS03915	SM00912	haemagglutination activity domain
SUDEN_RS03920	SM00448	cheY-homologous receiver domain
SUDEN_RS03920	SM00862	Transcriptional regulatory protein, C terminal
SUDEN_RS03950	SM00463	Small MutS-related domain
SUDEN_RS03950	SM00534	ATPase domain of DNA mismatch repair MUTS family
SUDEN_RS04025	SM00116	Domain in cystathionine beta-synthase and other proteins.
SUDEN_RS04025	SM01240	SUDEN_RS04025
SUDEN_RS04125	SM00363	S4 RNA-binding domain
SUDEN_RS04130	SM00060	Fibronectin type 3 domain
SUDEN_RS04140	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS04190	SM00448	cheY-homologous receiver domain
SUDEN_RS04330	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SUDEN_RS04355	SM00387	Histidine kinase-like ATPases
SUDEN_RS04355	SM00388	His Kinase A (phosphoacceptor) domain
SUDEN_RS04360	SM00448	cheY-homologous receiver domain
SUDEN_RS04410	SM00448	cheY-homologous receiver domain
SUDEN_RS04410	SM00862	Transcriptional regulatory protein, C terminal
SUDEN_RS04435	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS04440	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS04440	SM00962	SRP54-type protein, GTPase domain
SUDEN_RS04455	SM00322	K homology RNA-binding domain
SUDEN_RS04455	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SUDEN_RS04475	SM00849	Metallo-beta-lactamase superfamily
SUDEN_RS04575	SM00873	B3/4 domain
SUDEN_RS04575	SM00874	tRNA synthetase B5 domain
SUDEN_RS04575	SM00896	Ferredoxin-fold anticodon binding domain
SUDEN_RS04590	SM00316	Ribosomal protein S1-like RNA-binding domain
SUDEN_RS04645	SM00448	cheY-homologous receiver domain
SUDEN_RS04645	SM00862	Transcriptional regulatory protein, C terminal
SUDEN_RS04650	SM00387	Histidine kinase-like ATPases
SUDEN_RS04650	SM00388	His Kinase A (phosphoacceptor) domain
SUDEN_RS04655	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SUDEN_RS04680	SM00387	Histidine kinase-like ATPases
SUDEN_RS04680	SM00448	cheY-homologous receiver domain
SUDEN_RS04770	SM00841	Elongation factor P, C-terminal
SUDEN_RS04770	SM01185	SUDEN_RS04770
SUDEN_RS04775	SM00052	Putative diguanylate phosphodiesterase
SUDEN_RS04775	SM00267	diguanylate cyclase
SUDEN_RS04790	SM01152	SUDEN_RS04790
SUDEN_RS04800	SM00387	Histidine kinase-like ATPases
SUDEN_RS04800	SM00388	His Kinase A (phosphoacceptor) domain
SUDEN_RS04860	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS04870	SM00028	Tetratricopeptide repeats
SUDEN_RS04875	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
SUDEN_RS04875	SM01080	SUDEN_RS04875
SUDEN_RS04880	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SUDEN_RS04880	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SUDEN_RS04880	SM00849	Metallo-beta-lactamase superfamily
SUDEN_RS04905	SM00448	cheY-homologous receiver domain
SUDEN_RS04905	SM00850	LytTr DNA-binding domain
SUDEN_RS04975	SM00487	DEAD-like helicases superfamily
SUDEN_RS05025	SM00530	Helix-turn-helix XRE-family like proteins 
SUDEN_RS05035	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS05065	SM00986	Uracil DNA glycosylase superfamily
SUDEN_RS05065	SM00987	UreE urease accessory protein, C-terminal domain 
SUDEN_RS05070	SM00448	cheY-homologous receiver domain
SUDEN_RS05070	SM00862	Transcriptional regulatory protein, C terminal
SUDEN_RS05075	SM00387	Histidine kinase-like ATPases
SUDEN_RS05080	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUDEN_RS05080	SM00091	PAS domain
SUDEN_RS05080	SM00387	Histidine kinase-like ATPases
SUDEN_RS05080	SM00448	cheY-homologous receiver domain
SUDEN_RS05100	SM00448	cheY-homologous receiver domain
SUDEN_RS05105	SM00260	Two component signalling adaptor domain
SUDEN_RS05120	SM00073	Histidine Phosphotransfer domain
SUDEN_RS05120	SM00260	Two component signalling adaptor domain
SUDEN_RS05120	SM00387	Histidine kinase-like ATPases
SUDEN_RS05120	SM01231	SUDEN_RS05120
SUDEN_RS05125	SM00138	Methyltransferase, chemotaxis proteins 
SUDEN_RS05130	SM00387	Histidine kinase-like ATPases
SUDEN_RS05140	SM00448	cheY-homologous receiver domain
SUDEN_RS05155	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUDEN_RS05160	SM00387	Histidine kinase-like ATPases
SUDEN_RS05160	SM00448	cheY-homologous receiver domain
SUDEN_RS05165	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUDEN_RS05170	SM00052	Putative diguanylate phosphodiesterase
SUDEN_RS05170	SM00267	diguanylate cyclase
SUDEN_RS05170	SM00448	cheY-homologous receiver domain
SUDEN_RS05175	SM00387	Histidine kinase-like ATPases
SUDEN_RS05185	SM00448	cheY-homologous receiver domain
SUDEN_RS05200	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUDEN_RS05255	SM00704	CDGSH-type zinc finger. Function unknown.
SUDEN_RS05300	SM00062	Bacterial periplasmic substrate-binding proteins
SUDEN_RS05300	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUDEN_RS05300	SM00091	PAS domain
SUDEN_RS05310	SM00448	cheY-homologous receiver domain
SUDEN_RS05365	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUDEN_RS05370	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS05380	SM00852	Probable molybdopterin binding domain
SUDEN_RS05385	SM00710	Parallel beta-helix repeats
SUDEN_RS05425	SM00448	cheY-homologous receiver domain
SUDEN_RS05435	SM00091	PAS domain
SUDEN_RS05435	SM00267	diguanylate cyclase
SUDEN_RS05450	SM00843	SUDEN_RS05450
SUDEN_RS05475	SM00957	SecA DEAD-like domain
SUDEN_RS05475	SM00958	SecA preprotein cross-linking domain
SUDEN_RS05515	SM00881	CoA binding domain
SUDEN_RS05555	SM00448	cheY-homologous receiver domain
SUDEN_RS05695	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS05725	SM00852	Probable molybdopterin binding domain
SUDEN_RS05735	SM00248	ankyrin repeats
SUDEN_RS05780	SM01329	SUDEN_RS05780
SUDEN_RS05985	SM00320	WD40 repeats
SUDEN_RS05995	SM00881	CoA binding domain
SUDEN_RS06020	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS06035	SM00363	S4 RNA-binding domain
SUDEN_RS06050	SM01131	SUDEN_RS06050
SUDEN_RS06055	SM00155	Phospholipase D. Active site motifs.
SUDEN_RS06080	SM00450	Rhodanese Homology Domain
SUDEN_RS06165	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUDEN_RS06165	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUDEN_RS06185	SM00563	Phosphate acyltransferases
SUDEN_RS06240	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS06270	SM00267	diguanylate cyclase
SUDEN_RS06280	SM00671	Sel1-like repeats.
SUDEN_RS06340	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SUDEN_RS06425	SM01130	SUDEN_RS06425
SUDEN_RS06445	SM00271	DnaJ molecular chaperone homology domain
SUDEN_RS06455	SM00563	Phosphate acyltransferases
SUDEN_RS06465	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SUDEN_RS06475	SM01057	Eukaryotic-type carbonic anhydrase
SUDEN_RS06510	SM00448	cheY-homologous receiver domain
SUDEN_RS06510	SM00862	Transcriptional regulatory protein, C terminal
SUDEN_RS06515	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUDEN_RS06515	SM00091	PAS domain
SUDEN_RS06515	SM00387	Histidine kinase-like ATPases
SUDEN_RS06520	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SUDEN_RS06520	SM00474	3'-5' exonuclease
SUDEN_RS06520	SM00475	5'-3' exonuclease
SUDEN_RS06520	SM00482	DNA polymerase A domain
SUDEN_RS06585	SM00260	Two component signalling adaptor domain
SUDEN_RS06585	SM00448	cheY-homologous receiver domain
SUDEN_RS06620	SM00387	Histidine kinase-like ATPases
SUDEN_RS06635	SM00849	Metallo-beta-lactamase superfamily
SUDEN_RS06635	SM01027	Beta-Casp domain
SUDEN_RS06640	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS06650	SM00267	diguanylate cyclase
SUDEN_RS06725	SM00925	MltA specific insert domain
SUDEN_RS06730	SM00271	DnaJ molecular chaperone homology domain
SUDEN_RS06735	SM00450	Rhodanese Homology Domain
SUDEN_RS06740	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SUDEN_RS06745	SM01007	Class II Aldolase and Adducin N-terminal domain
SUDEN_RS06765	SM00842	Cell division protein FtsA
SUDEN_RS06770	SM00864	Tubulin/FtsZ family, GTPase domain
SUDEN_RS06770	SM00865	Tubulin/FtsZ family, C-terminal domain
SUDEN_RS06780	SM00419	helix_turn_helix, cAMP Regulatory protein
SUDEN_RS06800	SM00710	Parallel beta-helix repeats
SUDEN_RS06825	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS06860	SM00100	Cyclic nucleotide-monophosphate binding domain
SUDEN_RS06875	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS06920	SM01060	SUDEN_RS06920
SUDEN_RS06925	SM00886	Stress responsive A/B Barrel Domain
SUDEN_RS06945	SM00267	diguanylate cyclase
SUDEN_RS06970	SM00845	GatB domain
SUDEN_RS07010	SM00904	Riboflavin kinase
SUDEN_RS07015	SM00116	Domain in cystathionine beta-synthase and other proteins.
SUDEN_RS07015	SM00924	MgtE intracellular N domain
SUDEN_RS07020	SM00363	S4 RNA-binding domain
SUDEN_RS07025	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SUDEN_RS07025	SM00292	breast cancer carboxy-terminal domain
SUDEN_RS07025	SM00532	Ligase N family
SUDEN_RS07045	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS07075	SM00530	Helix-turn-helix XRE-family like proteins 
SUDEN_RS07110	SM00052	Putative diguanylate phosphodiesterase
SUDEN_RS07110	SM00267	diguanylate cyclase
SUDEN_RS07140	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS07145	SM00448	cheY-homologous receiver domain
SUDEN_RS07145	SM00862	Transcriptional regulatory protein, C terminal
SUDEN_RS07150	SM00387	Histidine kinase-like ATPases
SUDEN_RS07150	SM00388	His Kinase A (phosphoacceptor) domain
SUDEN_RS07190	SM00450	Rhodanese Homology Domain
SUDEN_RS07205	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS07205	SM01086	C-terminal, D2-small domain, of ClpB protein
SUDEN_RS07285	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SUDEN_RS07335	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS07365	SM00470	ParB-like nuclease domain
SUDEN_RS07435	SM00984	UDP binding domain
SUDEN_RS07555	SM00507	HNH nucleases
SUDEN_RS07555	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
SUDEN_RS07555	SM00534	ATPase domain of DNA mismatch repair MUTS family
SUDEN_RS07565	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SUDEN_RS07590	SM00479	SUDEN_RS07590
SUDEN_RS07595	SM00116	Domain in cystathionine beta-synthase and other proteins.
SUDEN_RS07620	SM00448	cheY-homologous receiver domain
SUDEN_RS07620	SM00862	Transcriptional regulatory protein, C terminal
SUDEN_RS07625	SM00387	Histidine kinase-like ATPases
SUDEN_RS07625	SM00388	His Kinase A (phosphoacceptor) domain
SUDEN_RS07650	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS07650	SM00994	ClpX C4-type zinc finger
SUDEN_RS07650	SM01086	C-terminal, D2-small domain, of ClpB protein
SUDEN_RS07665	SM00851	MGS-like domain
SUDEN_RS07665	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SUDEN_RS07750	SM00267	diguanylate cyclase
SUDEN_RS07770	SM00448	cheY-homologous receiver domain
SUDEN_RS07810	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUDEN_RS07850	SM00357	Cold shock protein domain
SUDEN_RS07865	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS07880	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SUDEN_RS07885	SM00267	diguanylate cyclase
SUDEN_RS07890	SM00100	Cyclic nucleotide-monophosphate binding domain
SUDEN_RS07900	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SUDEN_RS07950	SM01011	Aminopeptidase P, N-terminal domain
SUDEN_RS07965	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS07975	SM00260	Two component signalling adaptor domain
SUDEN_RS07980	SM00073	Histidine Phosphotransfer domain
SUDEN_RS07980	SM00260	Two component signalling adaptor domain
SUDEN_RS07980	SM00387	Histidine kinase-like ATPases
SUDEN_RS07980	SM00448	cheY-homologous receiver domain
SUDEN_RS07980	SM01231	SUDEN_RS07980
SUDEN_RS07985	SM00260	Two component signalling adaptor domain
SUDEN_RS07985	SM00448	cheY-homologous receiver domain
SUDEN_RS07995	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SUDEN_RS08025	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS08095	SM00357	Cold shock protein domain
SUDEN_RS08095	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS08095	SM00959	Rho termination factor, N-terminal domain
SUDEN_RS08105	SM00387	Histidine kinase-like ATPases
SUDEN_RS08110	SM00448	cheY-homologous receiver domain
SUDEN_RS08115	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS08120	SM00387	Histidine kinase-like ATPases
SUDEN_RS08120	SM00388	His Kinase A (phosphoacceptor) domain
SUDEN_RS08125	SM00448	cheY-homologous receiver domain
SUDEN_RS08125	SM00862	Transcriptional regulatory protein, C terminal
SUDEN_RS08140	SM00986	Uracil DNA glycosylase superfamily
SUDEN_RS08140	SM00987	UreE urease accessory protein, C-terminal domain 
SUDEN_RS08160	SM00487	DEAD-like helicases superfamily
SUDEN_RS08160	SM00490	helicase superfamily c-terminal domain
SUDEN_RS08160	SM00982	SUDEN_RS08160
SUDEN_RS08160	SM01058	CarD-like/TRCF domain
SUDEN_RS08180	SM00267	diguanylate cyclase
SUDEN_RS08210	SM01323	SUDEN_RS08210
SUDEN_RS08235	SM00849	Metallo-beta-lactamase superfamily
SUDEN_RS08295	SM01321	SUDEN_RS08295
SUDEN_RS08310	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS08360	SM00479	SUDEN_RS08360
SUDEN_RS08370	SM00825	Beta-ketoacyl synthase
SUDEN_RS08375	SM00823	Phosphopantetheine attachment site
SUDEN_RS08390	SM00822	SUDEN_RS08390
SUDEN_RS08525	SM01400	SUDEN_RS08525
SUDEN_RS08550	SM00052	Putative diguanylate phosphodiesterase
SUDEN_RS08550	SM00267	diguanylate cyclase
SUDEN_RS08575	SM00267	diguanylate cyclase
SUDEN_RS08575	SM01049	SUDEN_RS08575
SUDEN_RS08610	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUDEN_RS08615	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUDEN_RS08685	SM00028	Tetratricopeptide repeats
SUDEN_RS08695	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS08705	SM00448	cheY-homologous receiver domain
SUDEN_RS08735	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS08820	SM00487	DEAD-like helicases superfamily
SUDEN_RS08820	SM00490	helicase superfamily c-terminal domain
SUDEN_RS08890	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS08910	SM00237	Domains in Na-Ca exchangers and integrin-beta4
SUDEN_RS08970	SM00857	Resolvase, N terminal domain
SUDEN_RS08980	SM01321	SUDEN_RS08980
SUDEN_RS08985	SM01321	SUDEN_RS08985
SUDEN_RS09015	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS09045	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUDEN_RS09090	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUDEN_RS09100	SM00316	Ribosomal protein S1-like RNA-binding domain
SUDEN_RS09130	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SUDEN_RS09145	SM00062	Bacterial periplasmic substrate-binding proteins
SUDEN_RS09155	SM00448	cheY-homologous receiver domain
SUDEN_RS09155	SM00862	Transcriptional regulatory protein, C terminal
SUDEN_RS09170	SM00899	SUDEN_RS09170
SUDEN_RS09195	SM00487	DEAD-like helicases superfamily
SUDEN_RS09195	SM00490	helicase superfamily c-terminal domain
SUDEN_RS09235	SM00562	SUDEN_RS09235
SUDEN_RS09255	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS09260	SM00267	diguanylate cyclase
SUDEN_RS09260	SM00448	cheY-homologous receiver domain
SUDEN_RS09285	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SUDEN_RS09305	SM00644	SUDEN_RS09305
SUDEN_RS09310	SM00479	SUDEN_RS09310
SUDEN_RS09330	SM00836	DALR anticodon binding domain
SUDEN_RS09330	SM01016	Arginyl tRNA synthetase N terminal dom
SUDEN_RS09340	SM00072	Guanylate kinase homologues.
SUDEN_RS09355	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS09430	SM00028	Tetratricopeptide repeats
SUDEN_RS09470	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SUDEN_RS09470	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
SUDEN_RS09475	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SUDEN_RS09475	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
SUDEN_RS09480	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
SUDEN_RS09525	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS09535	SM00518	AP endonuclease family 2
SUDEN_RS09570	SM00271	DnaJ molecular chaperone homology domain
SUDEN_RS09620	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS09625	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS09630	SM00927	DNA mismatch repair enzyme MutH
SUDEN_RS09650	SM00422	helix_turn_helix, mercury resistance
SUDEN_RS09675	SM01001	AIR carboxylase
SUDEN_RS09720	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUDEN_RS09740	SM00244	prohibitin homologues
SUDEN_RS09760	SM00448	cheY-homologous receiver domain
SUDEN_RS09760	SM00862	Transcriptional regulatory protein, C terminal
SUDEN_RS09765	SM00091	PAS domain
SUDEN_RS09765	SM00387	Histidine kinase-like ATPases
SUDEN_RS09795	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS09805	SM01230	SUDEN_RS09805
SUDEN_RS09810	SM00917	LeuA allosteric (dimerisation) domain
SUDEN_RS09825	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS09835	SM00267	diguanylate cyclase
SUDEN_RS09850	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SUDEN_RS09875	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SUDEN_RS09905	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SUDEN_RS09930	SM00852	Probable molybdopterin binding domain
SUDEN_RS09945	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUDEN_RS09985	SM01228	SUDEN_RS09985
SUDEN_RS09990	SM00448	cheY-homologous receiver domain
SUDEN_RS09990	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SUDEN_RS09995	SM00448	cheY-homologous receiver domain
SUDEN_RS10015	SM00671	Sel1-like repeats.
SUDEN_RS10025	SM00487	DEAD-like helicases superfamily
SUDEN_RS10025	SM00490	helicase superfamily c-terminal domain
SUDEN_RS10025	SM00956	SUDEN_RS10025
SUDEN_RS10030	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUDEN_RS10030	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUDEN_RS10070	SM00138	Methyltransferase, chemotaxis proteins 
SUDEN_RS10075	SM00052	Putative diguanylate phosphodiesterase
SUDEN_RS10075	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUDEN_RS10075	SM00267	diguanylate cyclase
SUDEN_RS10095	SM00487	DEAD-like helicases superfamily
SUDEN_RS10095	SM00490	helicase superfamily c-terminal domain
SUDEN_RS10100	SM00342	helix_turn_helix, arabinose operon control protein
SUDEN_RS10125	SM00448	cheY-homologous receiver domain
SUDEN_RS10185	SM00267	diguanylate cyclase
SUDEN_RS10210	SM00490	helicase superfamily c-terminal domain
SUDEN_RS10215	SM00984	UDP binding domain
SUDEN_RS10225	SM01007	Class II Aldolase and Adducin N-terminal domain
SUDEN_RS10320	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUDEN_RS10335	SM00387	Histidine kinase-like ATPases
SUDEN_RS10335	SM00388	His Kinase A (phosphoacceptor) domain
SUDEN_RS10335	SM00849	Metallo-beta-lactamase superfamily
SUDEN_RS10340	SM00448	cheY-homologous receiver domain
SUDEN_RS10340	SM00862	Transcriptional regulatory protein, C terminal
SUDEN_RS10345	SM00671	Sel1-like repeats.
SUDEN_RS10355	SM00924	MgtE intracellular N domain
SUDEN_RS10390	SM01192	SUDEN_RS10390
SUDEN_RS10390	SM01193	SUDEN_RS10390
SUDEN_RS10395	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS10460	SM00267	diguanylate cyclase
SUDEN_RS10505	SM00358	Double-stranded RNA binding motif
SUDEN_RS10505	SM00535	Ribonuclease III family
SUDEN_RS10515	SM00028	Tetratricopeptide repeats
SUDEN_RS10540	SM01018	B12 binding domain
SUDEN_RS10545	SM00867	YceI-like domain 
SUDEN_RS10560	SM00267	diguanylate cyclase
SUDEN_RS10595	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS10610	SM00937	SUDEN_RS10610
SUDEN_RS10690	SM00849	Metallo-beta-lactamase superfamily
SUDEN_RS10730	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS10825	SM00849	Metallo-beta-lactamase superfamily
SUDEN_RS10830	SM00320	WD40 repeats
SUDEN_RS10835	SM00382	ATPases associated with a variety of cellular activities
SUDEN_RS10845	SM00091	PAS domain
SUDEN_RS10850	SM00052	Putative diguanylate phosphodiesterase
SUDEN_RS10850	SM00091	PAS domain
SUDEN_RS10850	SM00267	diguanylate cyclase
SUDEN_RS10855	SM00849	Metallo-beta-lactamase superfamily
SUDEN_RS10860	SM00650	Ribosomal RNA adenine dimethylases
SUDEN_RS10875	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUDEN_RS10885	SM00998	Adenylosuccinate lyase C-terminus
SUDEN_RS10900	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SUDEN_RS10915	SM00052	Putative diguanylate phosphodiesterase
SUDEN_RS10915	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUDEN_RS10915	SM00267	diguanylate cyclase
SUDEN_RS10950	SM00052	Putative diguanylate phosphodiesterase
SUDEN_RS10950	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUDEN_RS10950	SM00091	PAS domain
SUDEN_RS10950	SM00267	diguanylate cyclase
SUDEN_RS10960	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUDEN_RS10960	SM00091	PAS domain
SUDEN_RS10960	SM00387	Histidine kinase-like ATPases
SUDEN_RS10960	SM00388	His Kinase A (phosphoacceptor) domain
SUDEN_RS10960	SM00448	cheY-homologous receiver domain
SUDEN_RS10965	SM00062	Bacterial periplasmic substrate-binding proteins
SUDEN_RS10970	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUDEN_RS10975	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUDEN_RS10975	SM00091	PAS domain
SUDEN_RS10975	SM00387	Histidine kinase-like ATPases
SUDEN_RS10975	SM00388	His Kinase A (phosphoacceptor) domain
SUDEN_RS10975	SM00448	cheY-homologous receiver domain
SUDEN_RS11000	SM00267	diguanylate cyclase
SUDEN_RS11020	SM00267	diguanylate cyclase
SUDEN_RS11035	SM00052	Putative diguanylate phosphodiesterase
SUDEN_RS11035	SM00091	PAS domain
SUDEN_RS11035	SM00267	diguanylate cyclase
SUDEN_RS11040	SM00448	cheY-homologous receiver domain
SUDEN_RS11045	SM00448	cheY-homologous receiver domain
SUDEN_RS11050	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUDEN_RS11055	SM00387	Histidine kinase-like ATPases
SUDEN_RS11060	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUDEN_RS11060	SM00387	Histidine kinase-like ATPases
SUDEN_RS11060	SM00448	cheY-homologous receiver domain
SUDEN_RS11065	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUDEN_RS11065	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUDEN_RS11080	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUDEN_RS11080	SM00267	diguanylate cyclase
SUDEN_RS11085	SM00052	Putative diguanylate phosphodiesterase
SUDEN_RS11085	SM00267	diguanylate cyclase
SUDEN_RS11090	SM00267	diguanylate cyclase
SUDEN_RS11120	SM01321	SUDEN_RS11120
SUDEN_RS11130	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUDEN_RS11130	SM00091	PAS domain
SUDEN_RS11130	SM00387	Histidine kinase-like ATPases
SUDEN_RS11130	SM00388	His Kinase A (phosphoacceptor) domain
SUDEN_RS11135	SM00387	Histidine kinase-like ATPases
SUDEN_RS11135	SM00388	His Kinase A (phosphoacceptor) domain
SUDEN_RS11145	SM00052	Putative diguanylate phosphodiesterase
SUDEN_RS11145	SM00267	diguanylate cyclase
